BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008723
(556 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449447519|ref|XP_004141515.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Cucumis sativus]
gi|449510687|ref|XP_004163734.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Cucumis sativus]
Length = 699
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/592 (65%), Positives = 439/592 (74%), Gaps = 66/592 (11%)
Query: 2 SGIWRWKRQLSDIASSSMLPSSRTRFTPLVAGPV----NYLSNNSIGRAAGGHRRQPFFI 57
S I++WK+ + + +L S F P+ NYL GHRR+ FI
Sbjct: 7 SAIFKWKK----LKAMKLLCFSNHNFRLTQISPISTHLNYLH-------VSGHRRRESFI 55
Query: 58 GIQERYKWDHGG---DTF-----------RKIRAEANCPRCSKHMDLLFSN--------P 95
G+QERYKWD+GG D F RKIRAEANCPRCSKHMD+LFSN P
Sbjct: 56 GVQERYKWDNGGSGSDDFHSQSNITGTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNLP 115
Query: 96 SNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYFRPHRIAPLQGSFVEISISANNHNNNNT 155
S+ S P A G Y+AVN+CPNCK+AYYFRP++IAPLQGSF+EI + N+ N++
Sbjct: 116 SSSSGDAPPKAGGGREAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIG-NLNSKPKNSS 174
Query: 156 NKRLKKLSSGGSG--------------KLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNG 201
+R+ G+ ++SF++T RS+GGE + G
Sbjct: 175 ERRITTKDGKGNAIAGFSDENYVNNRLRVSFFETARSFGGE-------PPENWPPGPPPV 227
Query: 202 NGLAVHLPPGPPFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDL 261
NGLAVH PPGPPFAPGV VR GP+ G G G + WGGSNLG+DL
Sbjct: 228 NGLAVHSPPGPPFAPGVNFVRATGPNGSTSGSGGNGAGDGKK------NEWGGSNLGKDL 281
Query: 262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNV 321
PTPKEICKGLDKFVIGQEKAKKVLSVAV+NHYKRIYHA+L+KGSG E T VD+DD+V
Sbjct: 282 PTPKEICKGLDKFVIGQEKAKKVLSVAVHNHYKRIYHASLQKGSGNESGTQDTVDDDDSV 341
Query: 322 ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQ 381
ELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFV+ADATTLTQAGYVGEDVESILYKLLA
Sbjct: 342 ELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVLADATTLTQAGYVGEDVESILYKLLAA 401
Query: 382 AEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGAR 441
AEFNV+AAQQGM+YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG+R
Sbjct: 402 AEFNVQAAQQGMIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGSR 461
Query: 442 KHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR-AGVTDAAVT 500
KHPRGD+IQ+DTKDILFICGGAFVDLEKTIS+RRQDSSIGFGAPVRANMR G T AAVT
Sbjct: 462 KHPRGDNIQIDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRIGGATSAAVT 521
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
SSLLESVESSDLIAYGLIPEF+GRFPILVSL ALTEDQLV+VLTEPKNALG+
Sbjct: 522 SSLLESVESSDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGK 573
>gi|255557853|ref|XP_002519956.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
gi|223541002|gb|EEF42560.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
Length = 698
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/587 (67%), Positives = 444/587 (75%), Gaps = 59/587 (10%)
Query: 6 RWKR--QLSDIASSSMLPSSRT--RFTPL--VAGPVNYLSNNSIGRAAGGHRRQPFFIGI 59
RWKR ++ + S S+R R+ P+ ++ NYL+ G +RR+ IG+
Sbjct: 3 RWKRVKEIPKLLSYPDHLSNRDLHRWMPVSTISTYFNYLN-------IGCNRRRESLIGL 55
Query: 60 QERYKWDHGGDT------FRKIRAEANCPRCSKHMDLLFSN----------PSNLSPPVP 103
QERYKWD GD RKIRAE+NCPRCSKHMDLLFSN NL
Sbjct: 56 QERYKWDGNGDGNNNNSDVRKIRAESNCPRCSKHMDLLFSNRHFPSPSSNNNPNLDSTSN 115
Query: 104 APAVDGSGGYQAVNICPNCKSAYYFRPHRIAPLQGSFVEISISANNHNNNNTNKRLKKL- 162
+ + YQAVN CP+CK+AYYFRP++I PLQGSF+EI NN NN + R+ L
Sbjct: 116 NNNCNTNNTYQAVNFCPSCKTAYYFRPYKITPLQGSFIEIGRVGNNSPNNKSRNRIGSLT 175
Query: 163 --------------SSGGSGKL--SFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAV 206
S+ SG+L SFW+TLRSY G+ + NGNGLAV
Sbjct: 176 KQHPSTEDLEEGFDSNAISGRLRASFWNTLRSYAGDP-------PENWPPPPLNGNGLAV 228
Query: 207 HLPPGPPFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKE 266
H PPGPPFAPGV +R G GG GG GG GGGGG WGGSNLG+DLPTPKE
Sbjct: 229 HTPPGPPFAPGVNVIRA-----NGPGGGGGGEGGGEKSGGGGGGGWGGSNLGKDLPTPKE 283
Query: 267 ICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKS 326
IC+GLDKFVIGQ++AKKVLSVAVYNHYKRIYHA+LKKG G E ++ AVD+DDNVELEKS
Sbjct: 284 ICRGLDKFVIGQDRAKKVLSVAVYNHYKRIYHASLKKGPGEESGSSDAVDDDDNVELEKS 343
Query: 327 NVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNV 386
NVLLMGPTGSGKTLLAKTLAR VNVPFVIADAT LTQAGYVGEDVESILYKLL+ AEFNV
Sbjct: 344 NVLLMGPTGSGKTLLAKTLARFVNVPFVIADATALTQAGYVGEDVESILYKLLSVAEFNV 403
Query: 387 EAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRG 446
+AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRG
Sbjct: 404 QAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRG 463
Query: 447 DSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-GVTDAAVTSSLLE 505
D+IQ+DTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA GVT+AAVTSSLLE
Sbjct: 464 DNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGGVTNAAVTSSLLE 523
Query: 506 SVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
SVES+DLIAYGLIPEF+GRFPILVSL+ALTEDQLV+VLTEPKNALG+
Sbjct: 524 SVESADLIAYGLIPEFIGRFPILVSLSALTEDQLVRVLTEPKNALGK 570
>gi|359493519|ref|XP_002264217.2| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Vitis vinifera]
Length = 685
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/574 (70%), Positives = 446/574 (77%), Gaps = 44/574 (7%)
Query: 3 GIWRWKRQLSDIASSSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIGIQER 62
G+ R KR++ + +L R + P++ N + G HRR+ IG+QER
Sbjct: 4 GVLRGKREVVE----RLLMVGRCNHRFMQKSPISTRFANCL--HMGSHRRRESLIGVQER 57
Query: 63 YKWDHGG-DTF--RKIRAEANCPRCSKHMDLLFSN---PSNLSPPVPAPAVDGSGG---Y 113
YKWDHGG D F RKIRAEANCPRCSK MDLLFSN PSN SP VP + + G Y
Sbjct: 58 YKWDHGGSDGFQTRKIRAEANCPRCSKVMDLLFSNRHFPSNFSPAVPTDSSNSKGSGGSY 117
Query: 114 QAVNICPNCKSAYYFRPHRIAPLQGSFVEISISANNHNNNNTNK-----RLKKLSSGGSG 168
QAVN+CPNCK+AYYFRP++IAPLQGSFVEI S ++NN NTN KK S G G
Sbjct: 118 QAVNLCPNCKTAYYFRPYKIAPLQGSFVEIGRS--DYNNTNTNHPKGKDNEKKSSKNGGG 175
Query: 169 ---------KLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAVHLPPGPPFAPGVE 219
++SFW+TLRSYGG+ P S GNGLAVH PPGPPFAPGV
Sbjct: 176 HEEDYGSRLRMSFWETLRSYGGDPPENWPPPPPPPS-----GNGLAVHAPPGPPFAPGVN 230
Query: 220 AVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQE 279
+R G G G GGGG S G G WGGSNLG+DLPTPKEICKGLDKFVIGQE
Sbjct: 231 VIR--AAGPGVGGNGGGGGGNGSFGERNG---WGGSNLGKDLPTPKEICKGLDKFVIGQE 285
Query: 280 KAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKT 339
+AKKVLSVAVYNHYKRIYH +L+KGSGAE T+ +DD+VELEKSNVLLMGPTGSGKT
Sbjct: 286 RAKKVLSVAVYNHYKRIYHGSLQKGSGAESGTSEV--DDDSVELEKSNVLLMGPTGSGKT 343
Query: 340 LLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEV 399
LLAKTLAR VNVPFVIADATTLTQAGYVGEDVESILYKLL AEFNV+AAQQGMVYIDEV
Sbjct: 344 LLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVAEFNVQAAQQGMVYIDEV 403
Query: 400 DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFI 459
DKITKKAESLN+SRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD+IQ+DTKDILFI
Sbjct: 404 DKITKKAESLNLSRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFI 463
Query: 460 CGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-GVTDAAVTSSLLESVESSDLIAYGLI 518
CGGAFVDLEKTIS+RRQDSSIGFGAPVRANMR G+T+A VTSSLLESVESSDLIAYGLI
Sbjct: 464 CGGAFVDLEKTISDRRQDSSIGFGAPVRANMRTGGLTNAVVTSSLLESVESSDLIAYGLI 523
Query: 519 PEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
PEF+GRFPILVSL+ALTEDQLVKVLTEPKNALG+
Sbjct: 524 PEFIGRFPILVSLSALTEDQLVKVLTEPKNALGK 557
>gi|356529352|ref|XP_003533258.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Glycine max]
Length = 713
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/608 (62%), Positives = 435/608 (71%), Gaps = 77/608 (12%)
Query: 1 MSGIW-RWKRQLSDIASSSMLPSSRTR----FTPLVAGPVNYLSNNSIGRAAGGHRRQPF 55
MS ++ RWK S LP R F P ++ +N ++ GHR +
Sbjct: 1 MSRVFGRWKNAKEMALLSGSLPRGHHRTGFNFCP-ISTHLNMIA---------GHRWREA 50
Query: 56 FIGIQERYKWDHGGD---TFRKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVDGS-- 110
+G+QERYKWD GG + RKIRAEANCPRC+K M+L+FSN +P + + G
Sbjct: 51 PVGVQERYKWDRGGSDDTSSRKIRAEANCPRCTKDMNLVFSNRHFPTPQIESELGGGERE 110
Query: 111 GGYQAVNICPNCKSAYYFRPHRIAPLQGSFVEI--------------------------- 143
GYQ+VN+CP+CK+AYYFRP+ PLQG+FVEI
Sbjct: 111 KGYQSVNLCPSCKTAYYFRPYDTTPLQGTFVEIGRVTSTNNNGVNNVSGKGPSPRRITHG 170
Query: 144 --SISANNHNNNNTNKRLKKLSSGGSGK---LSFWDTLRSYGG-------------ELPP 185
+ ++ N + S+ + K +S W+TL +Y G E P
Sbjct: 171 KGGGKEGSSSSTNKGEEFGGKSNSNASKWLEVSLWETLMAYNGGAGGGDGSNGEPPESWP 230
Query: 186 LPSGDVTSNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGG 245
LP D S GNGNGNGLAVH PPGPPFAPG+ +R GP NGG G GG G +
Sbjct: 231 LPPDD---GSNGNGNGNGLAVHTPPGPPFAPGINVIRATGPRNGGSGGAGGGKGEKTA-- 285
Query: 246 GGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGS 305
WGGSNLG+D P+PKEICKGLDKFVIGQ++AKKVLSVAVYNHYKRIYHA L+KGS
Sbjct: 286 ------WGGSNLGKDFPSPKEICKGLDKFVIGQQRAKKVLSVAVYNHYKRIYHATLQKGS 339
Query: 306 GAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAG 365
A+ + +D+DDNVELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAG
Sbjct: 340 AADSGASEVLDDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG 399
Query: 366 YVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
YVGEDVESILYKLL ++FNV AAQQG++YIDEVDKITKKAESLNISRDVSGEGVQQALL
Sbjct: 400 YVGEDVESILYKLLVVSDFNVAAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALL 459
Query: 426 KMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 485
KMLEGTIVNVPEKGARK+PRGD+IQMDTK+ILFICGGAF+DLEKTISERRQDSSIGFGAP
Sbjct: 460 KMLEGTIVNVPEKGARKNPRGDNIQMDTKNILFICGGAFIDLEKTISERRQDSSIGFGAP 519
Query: 486 VRANMRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
VRANMRA G+TD+AVTSSLLESVES+DLIAYGLIPEF+GRFPILVSL+ALTEDQL VLT
Sbjct: 520 VRANMRAVGITDSAVTSSLLESVESADLIAYGLIPEFIGRFPILVSLSALTEDQLTMVLT 579
Query: 545 EPKNALGQ 552
EPKNALG+
Sbjct: 580 EPKNALGK 587
>gi|147770637|emb|CAN64542.1| hypothetical protein VITISV_013764 [Vitis vinifera]
Length = 730
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/618 (65%), Positives = 446/618 (72%), Gaps = 88/618 (14%)
Query: 3 GIWRWKRQLSDIASSSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIGIQER 62
G+ R KR++ + +L R + P++ N + G HRR+ IG+QER
Sbjct: 4 GVLRGKREVVE----RLLMVGRCNHRFMQKSPISTRFANCL--HMGSHRRRESLIGVQER 57
Query: 63 YKWDHGG-DTF--RKIRAEANCPRCSKHMDLLFSN---PSNLSPPVPAPAVDGSGG---Y 113
YKWDHGG D F RKIRAEANCPRCSK MDLLFSN PSN SP VP + + G Y
Sbjct: 58 YKWDHGGSDGFQTRKIRAEANCPRCSKVMDLLFSNRHFPSNFSPAVPTDSSNSKGSGGSY 117
Query: 114 QAVNICPNCKSAYYFRPHRIAPLQGSFVEISISANNHNNNNTNK-----RLKKLSSGGSG 168
QAVN+CPNCK+AYYFRP++IAPLQGSFVEI S ++NN NTN KK S G G
Sbjct: 118 QAVNLCPNCKTAYYFRPYKIAPLQGSFVEIGRS--DYNNTNTNHPKGKDNEKKSSKNGGG 175
Query: 169 ---------KLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAVHLPPGPPFAPGVE 219
++SFW+TLRSYGG+ P S GNGLAVH PPGPPFAPGV
Sbjct: 176 HEEDYGSRLRMSFWETLRSYGGDPPENWPPPPPPPS-----GNGLAVHAPPGPPFAPGVN 230
Query: 220 AVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQE 279
+R G G G GGGG S G G WGGSNLG+DLPTPKEICKGLDKFVIGQE
Sbjct: 231 VIR--AAGPGVGGNGGGGGGNGSFGERNG---WGGSNLGKDLPTPKEICKGLDKFVIGQE 285
Query: 280 KAKK----------------------------VLSVAVYNHYKRIYHANLKKGSGAEPKT 311
+AKK VLSVAVYNHYKRIYH +L+KGSGAE T
Sbjct: 286 RAKKFSGIEVYIVEIGKWGHSFKRSNWCQTWEVLSVAVYNHYKRIYHGSLQKGSGAESGT 345
Query: 312 AAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDV 371
+ +DD+VELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDV
Sbjct: 346 SEV--DDDSVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 403
Query: 372 ESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
ESILYKLL AEFNV+AAQQGMVYIDEVDKITKKAESLN+SRDVSGEGVQQALLKMLEGT
Sbjct: 404 ESILYKLLTVAEFNVQAAQQGMVYIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGT 463
Query: 432 ----------------IVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERR 475
IVNVPEKGARKHPRGD+IQ+DTKDILFICGGAFVDLEKTIS+RR
Sbjct: 464 DLKWSGYKILRGIKQXIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISDRR 523
Query: 476 QDSSIGFGAPVRANMRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTAL 534
QDSSIGFGAPVRANMR G+T+A VTSSLLESVESSDLIAYGLIPEF+GRFPILVSL+AL
Sbjct: 524 QDSSIGFGAPVRANMRTGGLTNAVVTSSLLESVESSDLIAYGLIPEFIGRFPILVSLSAL 583
Query: 535 TEDQLVKVLTEPKNALGQ 552
TEDQLVKVLTEPKNALG+
Sbjct: 584 TEDQLVKVLTEPKNALGK 601
>gi|356561766|ref|XP_003549149.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Glycine max]
Length = 711
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/606 (62%), Positives = 435/606 (71%), Gaps = 75/606 (12%)
Query: 1 MSGIW-RWKRQLSDIASSSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIGI 59
MS I+ RWK S LP R T P++ N GHRR+ +G+
Sbjct: 1 MSRIFGRWKNAKEMALLSGFLPRGHHR-TGFNFCPISTHLN-----MVAGHRRREAPVGV 54
Query: 60 QERYKWDHGG---DTFRKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVDGSGG---- 112
QERYKWD GG ++ RKIRAEANCPRC+K M+L+FSN +P + G G
Sbjct: 55 QERYKWDRGGSDDNSTRKIRAEANCPRCTKDMNLVFSNRHFPTPSSESELGGGGGEKEKG 114
Query: 113 YQAVNICPNCKSAYYFRPHRIAPLQGSFVEISISANNHNNN--------NTNKRLKKL-- 162
YQ+VN+CP+CK+AYYFRP+ PLQG+FVEI + NN ++ +R+
Sbjct: 115 YQSVNLCPSCKTAYYFRPYDTTPLQGTFVEIGRVTSTKNNGVNDLSGKGHSPRRITHGKG 174
Query: 163 ------SSGGSGK---------------LSFWDTLRSYG----------GELP---PL-P 187
SS G+ +S W+TL +Y GE P PL P
Sbjct: 175 GGKEGGSSTSKGEEFWGRSNNNASKWLEVSLWETLMTYNRGAGRGNGSNGEPPESWPLAP 234
Query: 188 SGDVTSNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGG 247
G NGNGNGLAVH PPGPPF PG+ +R GP NGG GG GG G +
Sbjct: 235 DG-------SNGNGNGLAVHTPPGPPFPPGINVIRATGPRNGGSGGGGGGKGEKTA---- 283
Query: 248 GGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGA 307
WGGSNLG+D P+PKEICKGLDKFVIGQ++AKKVLSVAVYNHYKRIYHA L+KGS A
Sbjct: 284 ----WGGSNLGKDFPSPKEICKGLDKFVIGQQRAKKVLSVAVYNHYKRIYHATLQKGSAA 339
Query: 308 EPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYV 367
+ + +D+DDNVELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFV+ DATTLTQAGYV
Sbjct: 340 DSGVSEVLDDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVVTDATTLTQAGYV 399
Query: 368 GEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 427
GEDVESILYKLL ++FNV AAQQG++YIDEVDKITKK++SLNISRDVSGEGVQQALLKM
Sbjct: 400 GEDVESILYKLLTVSDFNVAAAQQGIIYIDEVDKITKKSKSLNISRDVSGEGVQQALLKM 459
Query: 428 LEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR 487
LEGTIVNVPEKGARKHPRGD+IQMDTK+ILFICGGAF+DLEKTISERRQDSSIGFGAPVR
Sbjct: 460 LEGTIVNVPEKGARKHPRGDNIQMDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVR 519
Query: 488 ANMRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEP 546
ANMRA G+TD+AVTSSLLESVES+DLIAYGLIPEF+GRFPILVSL+ALTEDQL+ VLTEP
Sbjct: 520 ANMRAGGITDSAVTSSLLESVESADLIAYGLIPEFIGRFPILVSLSALTEDQLMMVLTEP 579
Query: 547 KNALGQ 552
KNALG+
Sbjct: 580 KNALGK 585
>gi|215769357|dbj|BAH01586.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218190998|gb|EEC73425.1| hypothetical protein OsI_07697 [Oryza sativa Indica Group]
Length = 645
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/569 (65%), Positives = 427/569 (75%), Gaps = 64/569 (11%)
Query: 1 MSGIWRWKRQLSDIAS--SSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIG 58
MSG+ RW+R L+ +A+ +S L + +VA P HRR
Sbjct: 1 MSGLLRWRR-LAAVATRAASTLTAPECCSPAVVAPP---------------HRR------ 38
Query: 59 IQERYKWDHGGDTF-----------RKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAV 107
+QER KW+ G T R+IRAEA+CPRCSKHMD+LFS+ + S A A
Sbjct: 39 VQERRKWE--GPTSSSSSSSDEHEPRRIRAEAHCPRCSKHMDILFSHRAPPSSSAAAGAG 96
Query: 108 DGSGGYQAVNICPNCKSAYYFRPHRIAPLQGSFVEI-SISANNHNNNNTNKRLKKLSSGG 166
G GGYQA+N+CPNC+SAY+FRPH +APLQG+FVEI + A+ ++ R
Sbjct: 97 AGGGGYQALNLCPNCRSAYFFRPHLLAPLQGTFVEIGRVRADLLPHDAVRAR-------- 148
Query: 167 SGKLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGP 226
SFW+ +R +S+S+ +G+G G+AVH+PPGPPF P + VR G
Sbjct: 149 --GASFWEAIRG-------------SSSSRDDGDGGGVAVHVPPGPPFHPNLNVVRVAGG 193
Query: 227 SNGGGSGGNGGGGGSSGGGGGGGSR-WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVL 285
GGG GG GG GG GG G G WGGSNLG+DLPTPKEIC+GLDK+VIGQ++AKKVL
Sbjct: 194 GGGGGGGGGGGAGGGGGGEEGAGKDGWGGSNLGKDLPTPKEICQGLDKYVIGQDRAKKVL 253
Query: 286 SVAVYNHYKRIYHANLKKGSGAEPK-TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKT 344
SVAVYNHYKRIYH +L+KGSGA+ D+DD VELEKSNVLLMGPTGSGKTLLAKT
Sbjct: 254 SVAVYNHYKRIYHKSLQKGSGADLGGFDGEADDDDGVELEKSNVLLMGPTGSGKTLLAKT 313
Query: 345 LARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITK 404
LAR VNVPFVIADATTLTQAGYVGEDVESILYKLLA A+FNV+AAQQGMVYIDEVDKITK
Sbjct: 314 LARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAVADFNVQAAQQGMVYIDEVDKITK 373
Query: 405 KAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAF 464
KAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD+IQ+DTKDILFICGGAF
Sbjct: 374 KAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAF 433
Query: 465 VDLEKTISERRQDSSIGFGAPVRANMRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVG 523
+DLEKTISERRQDSSIGFGAPVRANMRA G++ A VTSSLLESVES DLIAYGLIPEF+G
Sbjct: 434 IDLEKTISERRQDSSIGFGAPVRANMRAGGISSAQVTSSLLESVESGDLIAYGLIPEFIG 493
Query: 524 RFPILVSLTALTEDQLVKVLTEPKNALGQ 552
RFPILVSL AL EDQLV+VL EPKNALG+
Sbjct: 494 RFPILVSLAALNEDQLVQVLMEPKNALGK 522
>gi|357149618|ref|XP_003575174.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
isoform 1 [Brachypodium distachyon]
Length = 640
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/482 (71%), Positives = 393/482 (81%), Gaps = 36/482 (7%)
Query: 73 RKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYFRPHR 132
R+IRAEA+CPRCSKHMD+LFS+ +PP APA G+GGYQA+N+CPNC++AY+FRP+
Sbjct: 70 RRIRAEAHCPRCSKHMDILFSH---RAPPSSAPA--GAGGYQALNLCPNCRTAYFFRPNI 124
Query: 133 IAPLQGSFVEISISANNHNNNNTNKRLKKLSSGGSGKLSFWDTLRSYGGELPPLPSGDVT 192
+APLQG+FVEI + + R SFW+ +R+ +
Sbjct: 125 LAPLQGTFVEIGRVRADFPPDGVRVR----------DPSFWEAIRA-------------S 161
Query: 193 SNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRW 252
S+S+ +G+G+G+AVH+PPGPPF P + VR G GGG+GG GG G + G W
Sbjct: 162 SSSRDDGDGSGVAVHVPPGPPFHPNLNVVRVAGGGGGGGAGGGGGEEGGAKDG------W 215
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
GGSNLG+D PTPKEI KGLDK+VIGQE+AKKVLSVAVYNHYKRIYH +++KGSGA+ ++
Sbjct: 216 GGSNLGKDFPTPKEISKGLDKYVIGQERAKKVLSVAVYNHYKRIYHQSVQKGSGADLGSS 275
Query: 313 -AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDV 371
D DDNVELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDV
Sbjct: 276 DGEADGDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 335
Query: 372 ESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
ESILYKLL A+FNV+AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT
Sbjct: 336 ESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 395
Query: 432 IVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR 491
IVNVPEKGARKHPRGD+IQ+DTKDILFICGGAF+DLEKTISERRQDSSIGFGAPVRA+MR
Sbjct: 396 IVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRASMR 455
Query: 492 A-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
G++ A VTSSLLESVES DLIAYGLIPEF+GRFPILVSL AL EDQLV+VLTEPKNAL
Sbjct: 456 TGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLTEPKNAL 515
Query: 551 GQ 552
G+
Sbjct: 516 GK 517
>gi|413937331|gb|AFW71882.1| hypothetical protein ZEAMMB73_870207 [Zea mays]
Length = 642
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/567 (63%), Positives = 415/567 (73%), Gaps = 63/567 (11%)
Query: 1 MSGIWRWKRQLSDIASSSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIGIQ 60
MSG+ RW+R L++ A+ + + T P + ++ + HRR +Q
Sbjct: 1 MSGLLRWRR-LANAATRAA-----STLTAAECSPAAASAAGAVAQPPPPHRR------LQ 48
Query: 61 ERYKWDHGGDTF------------RKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVD 108
ER KW+ + R+IRAEA+CPRCSKHMD+LFS+ P
Sbjct: 49 ERRKWESSSGSGGSSSSSTDEPEPRRIRAEAHCPRCSKHMDILFSHRG-------PPTAA 101
Query: 109 GSGGYQAVNICPNCKSAYYFRPHRIAPLQGSFVEI-SISANNHNNNNTNKRLKKLSSGGS 167
+ GYQA+N+CPNC+SAY+F PH +APLQG+FVEI + A+ ++ R +
Sbjct: 102 AAAGYQALNLCPNCRSAYFFHPHVLAPLQGTFVEIGRVRADLLDHPAARARERDPV---- 157
Query: 168 GKLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGPS 227
FW+ +R+ +S+S+ +G G G+AVH+PPGPPF P + VR G
Sbjct: 158 ----FWEAIRA-------------SSSSRDDGEGGGVAVHVPPGPPFHPNLNVVRVAGSG 200
Query: 228 NGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSV 287
GGG G G G G WGGSNLG DLPTPKEICKGLDK+VIGQ++AKKVLSV
Sbjct: 201 GGGGGGAGDEGAGKEG--------WGGSNLGRDLPTPKEICKGLDKYVIGQDRAKKVLSV 252
Query: 288 AVYNHYKRIYHANLKKGSGAEPK-TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
AVYNHYKRIYH +L+KGSGA+ D+D+NVELEKSNVLLMGPTGSGKTLLAKTLA
Sbjct: 253 AVYNHYKRIYHQSLQKGSGADLGGFDGEADDDNNVELEKSNVLLMGPTGSGKTLLAKTLA 312
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
R VNVPFVIADATTLTQAGYVGEDVESILYKLL A+FNV+AAQQGMVYIDEVDKITKKA
Sbjct: 313 RFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKA 372
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD+IQ+DTKDILFICGGAFVD
Sbjct: 373 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVD 432
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAA-VTSSLLESVESSDLIAYGLIPEFVGRF 525
LEKTISERRQDSSIGFGAPVRANMR G T +A VTSSLLESVES DLIAYGLIPEF+GRF
Sbjct: 433 LEKTISERRQDSSIGFGAPVRANMRVGGTSSAQVTSSLLESVESGDLIAYGLIPEFIGRF 492
Query: 526 PILVSLTALTEDQLVKVLTEPKNALGQ 552
PILVSLTAL EDQLV+VLTEPKNALG+
Sbjct: 493 PILVSLTALNEDQLVQVLTEPKNALGK 519
>gi|413937330|gb|AFW71881.1| hypothetical protein ZEAMMB73_870207 [Zea mays]
Length = 643
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/568 (63%), Positives = 415/568 (73%), Gaps = 64/568 (11%)
Query: 1 MSGIWRWKRQLSDIASSSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIGIQ 60
MSG+ RW+R L++ A+ + + T P + ++ + HRR +Q
Sbjct: 1 MSGLLRWRR-LANAATRAA-----STLTAAECSPAAASAAGAVAQPPPPHRR------LQ 48
Query: 61 ERYKWDHGGDTF------------RKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVD 108
ER KW+ + R+IRAEA+CPRCSKHMD+LFS+ P
Sbjct: 49 ERRKWESSSGSGGSSSSSTDEPEPRRIRAEAHCPRCSKHMDILFSHRG-------PPTAA 101
Query: 109 GSGGYQAVNICPNCKSAYYFRPHRIAPLQGSFVEI-SISANNHNNNNTNKRLKKLSSGGS 167
+ GYQA+N+CPNC+SAY+F PH +APLQG+FVEI + A+ ++ R +
Sbjct: 102 AAAGYQALNLCPNCRSAYFFHPHVLAPLQGTFVEIGRVRADLLDHPAARARERDPV---- 157
Query: 168 GKLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGPS 227
FW+ +R+ +S+S+ +G G G+AVH+PPGPPF P + VR G
Sbjct: 158 ----FWEAIRA-------------SSSSRDDGEGGGVAVHVPPGPPFHPNLNVVRVAGSG 200
Query: 228 NGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSV 287
GGG G G G G WGGSNLG DLPTPKEICKGLDK+VIGQ++AKKVLSV
Sbjct: 201 GGGGGGAGDEGAGKEG--------WGGSNLGRDLPTPKEICKGLDKYVIGQDRAKKVLSV 252
Query: 288 AVYNHYKRIYHANLKKG-SGAEPK-TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTL 345
AVYNHYKRIYH +L+KG SGA+ D+D+NVELEKSNVLLMGPTGSGKTLLAKTL
Sbjct: 253 AVYNHYKRIYHQSLQKGRSGADLGGFDGEADDDNNVELEKSNVLLMGPTGSGKTLLAKTL 312
Query: 346 ARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKK 405
AR VNVPFVIADATTLTQAGYVGEDVESILYKLL A+FNV+AAQQGMVYIDEVDKITKK
Sbjct: 313 ARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKITKK 372
Query: 406 AESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFV 465
AESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD+IQ+DTKDILFICGGAFV
Sbjct: 373 AESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFV 432
Query: 466 DLEKTISERRQDSSIGFGAPVRANMRAGVTDAA-VTSSLLESVESSDLIAYGLIPEFVGR 524
DLEKTISERRQDSSIGFGAPVRANMR G T +A VTSSLLESVES DLIAYGLIPEF+GR
Sbjct: 433 DLEKTISERRQDSSIGFGAPVRANMRVGGTSSAQVTSSLLESVESGDLIAYGLIPEFIGR 492
Query: 525 FPILVSLTALTEDQLVKVLTEPKNALGQ 552
FPILVSLTAL EDQLV+VLTEPKNALG+
Sbjct: 493 FPILVSLTALNEDQLVQVLTEPKNALGK 520
>gi|242062022|ref|XP_002452300.1| hypothetical protein SORBIDRAFT_04g023280 [Sorghum bicolor]
gi|241932131|gb|EES05276.1| hypothetical protein SORBIDRAFT_04g023280 [Sorghum bicolor]
Length = 640
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 362/571 (63%), Positives = 412/571 (72%), Gaps = 69/571 (12%)
Query: 1 MSGIWRWKRQLSDIASSSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIGIQ 60
MSG+ RW+R L + TR + S + HRR +Q
Sbjct: 1 MSGLLRWRR----------LAGAATRAASTLTAA--ECSPAAPLPPPPPHRR------LQ 42
Query: 61 ERYKWDHGGDTF----------------RKIRAEANCPRCSKHMDLLFSNPSNLSPPVPA 104
ER KW+ R+IRAEA+CPRCSKHMD+LFS+ A
Sbjct: 43 ERRKWESSSSGSGSGGSSSSSSTDEPEPRRIRAEAHCPRCSKHMDILFSHRGPPPTTAGA 102
Query: 105 PAVDGSGGYQAVNICPNCKSAYYFRPHRIAPLQGSFVEI-SISANNHNNNNTNKRLKKLS 163
A +GGYQA+N+CPNC+SAY+FRPH +APLQG+FVEI + A+ ++ R
Sbjct: 103 GA---AGGYQALNLCPNCRSAYFFRPHVLAPLQGTFVEIGRVRADLLDHPAARAR----- 154
Query: 164 SGGSGKLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAVHLPPGPPFAPGVEAVRK 223
FW+ +R+ +S+S+ +G+G G+AVH+PPGPPF P + VR
Sbjct: 155 -----DPIFWEAIRA-------------SSSSRDDGDGGGVAVHVPPGPPFHPNLNVVRV 196
Query: 224 MGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKK 283
G GGG GG G G+ WGGSNLG DLPTPKEICKGLDK+VIGQ++AKK
Sbjct: 197 AGSGGGGGGGGGAGEEGAGK------EGWGGSNLGRDLPTPKEICKGLDKYVIGQDRAKK 250
Query: 284 VLSVAVYNHYKRIYHANLKKGSGAEPK-TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLA 342
VLSVAVYNHYKRIYH +L+KGSGA+ D+DDNVELEKSNVLLMGPTGSGKTLLA
Sbjct: 251 VLSVAVYNHYKRIYHQSLQKGSGADLGGFDGEADDDDNVELEKSNVLLMGPTGSGKTLLA 310
Query: 343 KTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKI 402
KTLAR VNVPFVIADATTLTQAGYVGEDVESILYKLL A+FNV+AAQQGMVYIDEVDKI
Sbjct: 311 KTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKI 370
Query: 403 TKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGG 462
TKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD+IQ+DTKDILFICGG
Sbjct: 371 TKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGG 430
Query: 463 AFVDLEKTISERRQDSSIGFGAPVRANMRA-GVTDAAVTSSLLESVESSDLIAYGLIPEF 521
AFVDLEKTISERRQDSSIGFGAPVRANMRA G++ A VTSSLLESVES DLIAYGLIPEF
Sbjct: 431 AFVDLEKTISERRQDSSIGFGAPVRANMRAGGISSAQVTSSLLESVESGDLIAYGLIPEF 490
Query: 522 VGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
+GRFPILVSL AL EDQLV+VLTEPKNALG+
Sbjct: 491 IGRFPILVSLAALNEDQLVQVLTEPKNALGK 521
>gi|357149621|ref|XP_003575175.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
isoform 2 [Brachypodium distachyon]
Length = 658
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 343/500 (68%), Positives = 393/500 (78%), Gaps = 54/500 (10%)
Query: 73 RKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYFRPHR 132
R+IRAEA+CPRCSKHMD+LFS+ + PP APA G+GGYQA+N+CPNC++AY+FRP+
Sbjct: 70 RRIRAEAHCPRCSKHMDILFSHRA---PPSSAPA--GAGGYQALNLCPNCRTAYFFRPNI 124
Query: 133 IAPLQGSFVEISISANNHNNNNTNKRLKKLSSGGSGKLSFWDTLRSYGGELPPLPSGDVT 192
+APLQG+FVEI + + R SFW+ +R+ +
Sbjct: 125 LAPLQGTFVEIGRVRADFPPDGVRVR----------DPSFWEAIRA-------------S 161
Query: 193 SNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRW 252
S+S+ +G+G+G+AVH+PPGPPF P + VR G GGG+GG GG G + G W
Sbjct: 162 SSSRDDGDGSGVAVHVPPGPPFHPNLNVVRVAGGGGGGGAGGGGGEEGGAKDG------W 215
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
GGSNLG+D PTPKEI KGLDK+VIGQE+AKKVLSVAVYNHYKRIYH +++KGSGA+ ++
Sbjct: 216 GGSNLGKDFPTPKEISKGLDKYVIGQERAKKVLSVAVYNHYKRIYHQSVQKGSGADLGSS 275
Query: 313 -AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA------- 364
D DDNVELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQA
Sbjct: 276 DGEADGDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAIRLKFSN 335
Query: 365 ----GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKK-------AESLNISR 413
GYVGEDVESILYKLL A+FNV+AAQQGMVYIDEVDKITKK AESLNISR
Sbjct: 336 FLQAGYVGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKVSTFDMQAESLNISR 395
Query: 414 DVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISE 473
DVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD+IQ+DTKDILFICGGAF+DLEKTISE
Sbjct: 396 DVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISE 455
Query: 474 RRQDSSIGFGAPVRANMRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLT 532
RRQDSSIGFGAPVRA+MR G++ A VTSSLLESVES DLIAYGLIPEF+GRFPILVSL
Sbjct: 456 RRQDSSIGFGAPVRASMRTGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLA 515
Query: 533 ALTEDQLVKVLTEPKNALGQ 552
AL EDQLV+VLTEPKNALG+
Sbjct: 516 ALNEDQLVQVLTEPKNALGK 535
>gi|46390353|dbj|BAD15818.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX1
(CLPX) [Oryza sativa Japonica Group]
Length = 666
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 373/590 (63%), Positives = 427/590 (72%), Gaps = 85/590 (14%)
Query: 1 MSGIWRWKRQLSDIAS--SSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIG 58
MSG+ RW+R L+ +A+ +S L + +VA P HRR
Sbjct: 1 MSGLLRWRR-LAAVATRAASTLTAPECCSPAVVAPP---------------HRR------ 38
Query: 59 IQERYKWDHGGDTF-----------RKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAV 107
+QER KW+ G T R+IRAEA+CPRCSKHMD+LFS+ + S A A
Sbjct: 39 VQERRKWE--GPTSSSSSSSDEHEPRRIRAEAHCPRCSKHMDILFSHRAPPSSSAAAGAG 96
Query: 108 DGSGGYQAVNICPNCKSAYYFRPHRIAPLQGSFVEI-SISANNHNNNNTNKRLKKLSSGG 166
G GGYQA+N+CPNC+SAY+FRPH +APLQG+FVEI + A+ ++ R
Sbjct: 97 AGGGGYQALNLCPNCRSAYFFRPHLLAPLQGTFVEIGRVRADLLPHDAVRAR-------- 148
Query: 167 SGKLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGP 226
SFW+ +R +S+S+ +G+G G+AVH+PPGPPF P + VR G
Sbjct: 149 --GASFWEAIRG-------------SSSSRDDGDGGGVAVHVPPGPPFHPNLNVVRVAGG 193
Query: 227 SNGGGSGGNGGGGGSSGGGGGGGSR-WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVL 285
GGG GG GG GG GG G G WGGSNLG+DLPTPKEIC+GLDK+VIGQ++AKKVL
Sbjct: 194 GGGGGGGGGGGAGGGGGGEEGAGKDGWGGSNLGKDLPTPKEICQGLDKYVIGQDRAKKVL 253
Query: 286 SVAVYNHYKRIYHANLKKGSGAEPK-TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKT 344
SVAVYNHYKRIYH +L+KGSGA+ D+DD VELEKSNVLLMGPTGSGKTLLAKT
Sbjct: 254 SVAVYNHYKRIYHKSLQKGSGADLGGFDGEADDDDGVELEKSNVLLMGPTGSGKTLLAKT 313
Query: 345 LARHVNVPFVIADATTLTQA--------------GYVGEDVESILYKLLAQAEFNVEAAQ 390
LAR VNVPFVIADATTLTQA GYVGEDVESILYKLLA A+FNV+AAQ
Sbjct: 314 LARFVNVPFVIADATTLTQAIPKVKLNSCAFLQAGYVGEDVESILYKLLAVADFNVQAAQ 373
Query: 391 QGMVYIDEVDKITKKA-------ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKH 443
QGMVYIDEVDKITKKA ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKH
Sbjct: 374 QGMVYIDEVDKITKKADVFNMQAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKH 433
Query: 444 PRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-GVTDAAVTSS 502
PRGD+IQ+DTKDILFICGGAF+DLEKTISERRQDSSIGFGAPVRANMRA G++ A VTSS
Sbjct: 434 PRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRAGGISSAQVTSS 493
Query: 503 LLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
LLESVES DLIAYGLIPEF+GRFPILVSL AL EDQLV+VL EPKNALG+
Sbjct: 494 LLESVESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLMEPKNALGK 543
>gi|326501208|dbj|BAJ98835.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 330/482 (68%), Positives = 381/482 (79%), Gaps = 38/482 (7%)
Query: 73 RKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYFRPHR 132
R+IRAEA+CPRCSKHMD+LFS+ + A +GGYQ +N+CPNC++AY+F P+
Sbjct: 69 RRIRAEAHCPRCSKHMDILFSHRAAPRS-----APAAAGGYQTLNLCPNCRTAYFFHPNH 123
Query: 133 IAPLQGSFVEISISANNHNNNNTNKRLKKLSSGGSGKLSFWDTLRSYGGELPPLPSGDVT 192
+ PLQG+FVEI + L G S W +R+ +
Sbjct: 124 LEPLQGTFVEI------------GRVRADLPPDGVRDPSSWKAIRA-------------S 158
Query: 193 SNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRW 252
S+S+ +G+G+G+AVH+PPGPPF P + VR G GGG+ G G G W
Sbjct: 159 SSSRDDGDGSGVAVHVPPGPPFHPSLNVVRVAGGGGGGGAAGGGAEEGGGK------DGW 212
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
GGSNLG+D PTPKEI KGLDK+VIGQ++AKKVLSVAVYNHYKRIYH +L+KGSGA+ +
Sbjct: 213 GGSNLGKDFPTPKEISKGLDKYVIGQDRAKKVLSVAVYNHYKRIYHQSLQKGSGADLGCS 272
Query: 313 -AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDV 371
D +DNVELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDV
Sbjct: 273 DGEADGEDNVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 332
Query: 372 ESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
ESILYKLL+ A+FNV+AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT
Sbjct: 333 ESILYKLLSVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 392
Query: 432 IVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR 491
IVNVPEKGARKHPRGD+IQ+DTKDILFICGGAF+DLEKTISERRQDSSIGFGAPVRA+MR
Sbjct: 393 IVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRASMR 452
Query: 492 -AGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+G++ A VTSSLLESVES DLIAYGLIPEF+GRFPILVSL+AL EDQLV+VLTEPKNAL
Sbjct: 453 TSGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNAL 512
Query: 551 GQ 552
G+
Sbjct: 513 GK 514
>gi|357498613|ref|XP_003619595.1| ATP-dependent Clp protease ATP-binding subunit clpX [Medicago
truncatula]
gi|355494610|gb|AES75813.1| ATP-dependent Clp protease ATP-binding subunit clpX [Medicago
truncatula]
Length = 672
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 355/544 (65%), Positives = 404/544 (74%), Gaps = 74/544 (13%)
Query: 64 KWDHGG------DTFRKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAV-------DGS 110
KW GG + RKIRAEANCPRCSK M+L FSN S + +G
Sbjct: 14 KWGRGGSDGDMQNPTRKIRAEANCPRCSKDMNLFFSNRHMQSNGGDSGGGNGENLGSNGD 73
Query: 111 GGYQAVNICPNCKSAYYFRPHRIAPLQGSFVEISISANNHNNNNTNKRLKKLSSGGSGK- 169
GGYQAVN+CPNCK+AY+FRP+ +PLQG+FVEI +NN N ++ +L + G GK
Sbjct: 74 GGYQAVNLCPNCKTAYHFRPYNTSPLQGTFVEIGRVSNN-NGGSSKTQLSRRFKNGIGKD 132
Query: 170 -------------------------LSFWDTLRSYGG---------------ELPPLPSG 189
+S W+TLR+Y G E PLP G
Sbjct: 133 SNSIKSGHHGSEDLGLNGSASNWLEVSMWETLRNYNGGSGNAAGGGNNGEPPETWPLPVG 192
Query: 190 DVTSNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGG 249
GNGNGLAVH PPGPPFAPG+ +R GP GG GG G +
Sbjct: 193 --------GGNGNGLAVHTPPGPPFAPGLNVIRARGPQEGGPGGGGNGEKNT-------- 236
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
WGGSNLG+DLP+PKEICKGLDKFVIGQ +AKKVLSVAVYNHYKRIYHA L KGSGA+
Sbjct: 237 --WGGSNLGKDLPSPKEICKGLDKFVIGQGRAKKVLSVAVYNHYKRIYHATLPKGSGADS 294
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+ +D+D+NVELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGE
Sbjct: 295 GISGILDDDENVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGE 354
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVESILYKLLA A++NV AAQQG++YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE
Sbjct: 355 DVESILYKLLAAADYNVAAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 414
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GTIVNVPEKGARK+PRGD+IQ+DTK+ILFICGGAF+DLEKTISERRQDSSIGFGAPVRAN
Sbjct: 415 GTIVNVPEKGARKNPRGDNIQIDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRAN 474
Query: 490 MRAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKN 548
+R+G + D+AV SSLLESVESSDLIAYGLIPEF+GRFPILVSL+ALTE+QL++VLTEPK+
Sbjct: 475 IRSGRIIDSAVASSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEEQLMQVLTEPKH 534
Query: 549 ALGQ 552
ALG+
Sbjct: 535 ALGK 538
>gi|297851760|ref|XP_002893761.1| hypothetical protein ARALYDRAFT_473508 [Arabidopsis lyrata subsp.
lyrata]
gi|297339603|gb|EFH70020.1| hypothetical protein ARALYDRAFT_473508 [Arabidopsis lyrata subsp.
lyrata]
Length = 660
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 349/581 (60%), Positives = 396/581 (68%), Gaps = 70/581 (12%)
Query: 1 MSGIWRWKRQLSDIASSSMLPSSRTRFTPLVAGPVNYLSN-NSIGRAAGGHRRQPFFIGI 59
MSGIWRW R L +A L A ++ + N NS+ + RR I
Sbjct: 1 MSGIWRW-RNLKSLA--------------LHARSISPVPNLNSLELGSSPRRR------I 39
Query: 60 QERYKWDHGG-----DTF------RKIRAEANCPRCSKHMDLLFSN----PSNLSPPVPA 104
QER+K + GG D F RK+RAE NCPRCSK MDLLFSN SNL
Sbjct: 40 QERFKSEQGGGGGGGDDFPVPVSRRKLRAEPNCPRCSKQMDLLFSNRQFPSSNLLQRPDD 99
Query: 105 PAVDGSG---GYQAVNICPNCKSAYYFRPHRIAPLQGSFVEIS-----ISANNHNNNNTN 156
G+G +Q++N CP CK+AY F P ++PLQG+F+EI +A +
Sbjct: 100 SDSSGAGDKTNFQSMNFCPTCKTAYGFNPRGVSPLQGTFIEIGRVQSPTNAATSKSTRKQ 159
Query: 157 KRLKKLSSGGS--GKL--SFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAVHLPPGP 212
+ K L+ G + KL SFWDTLRSYG E P S + L P
Sbjct: 160 QHSKDLNQGFNYRNKLRSSFWDTLRSYGAEPPEDWSPPPPPPPPPPPSHPSLNSSPPTTI 219
Query: 213 PFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLD 272
P V P SRWGG++LG D PTPKEICK LD
Sbjct: 220 PVNASPSTVETTSPL---------------PDAANDVSRWGGASLGRDFPTPKEICKWLD 264
Query: 273 KFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMG 332
KFVIGQ +AKKVLSVAVYNHYKRIYH ++KKGS A+P +D+DDNVEL+KSNVLLMG
Sbjct: 265 KFVIGQTRAKKVLSVAVYNHYKRIYHTSMKKGSAAQP-----IDDDDNVELDKSNVLLMG 319
Query: 333 PTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQG 392
PTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVG+DVESIL+KLL AEFNV+AAQQG
Sbjct: 320 PTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLTVAEFNVQAAQQG 379
Query: 393 MVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMD 452
+VYIDEVDKITKKAESLNISRDVSGEGVQQALLK+LEGTIVNVP KGARKHPRGD IQ+D
Sbjct: 380 IVYIDEVDKITKKAESLNISRDVSGEGVQQALLKLLEGTIVNVPGKGARKHPRGDHIQID 439
Query: 453 TKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM-RAGVTDAAVTSSLLESVESSD 511
TKDILFICGGAFVDLEKTI +RRQDSSIGFGAPVRANM +GVT A+TSSLLESVES+D
Sbjct: 440 TKDILFICGGAFVDLEKTIVDRRQDSSIGFGAPVRANMATSGVTSGAITSSLLESVESAD 499
Query: 512 LIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
L AYGLIPEFVGRFPILVSL+ALTEDQL++VL EPKNALG+
Sbjct: 500 LTAYGLIPEFVGRFPILVSLSALTEDQLIRVLVEPKNALGK 540
>gi|222623077|gb|EEE57209.1| hypothetical protein OsJ_07170 [Oryza sativa Japonica Group]
Length = 583
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 337/483 (69%), Positives = 378/483 (78%), Gaps = 41/483 (8%)
Query: 88 MDLLFSNPSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYFRPHRIAPLQGSFVEI-SIS 146
MD+LFS+ S A A G GGYQA+N+CPNC+SAY+FRPH +APLQG+FVEI +
Sbjct: 1 MDILFSHRGPPSSFAAAGAGAGGGGYQALNLCPNCRSAYFFRPHLLAPLQGTFVEIGRVR 60
Query: 147 ANNHNNNNTNKRLKKLSSGGSGKLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAV 206
A+ ++ R SFW+ +R +S+S+ +G+G G+AV
Sbjct: 61 ADLLPHDAVRAR----------GASFWEAIRG-------------SSSSRDDGDGGGVAV 97
Query: 207 HLPPGPPFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSR-WGGSNLGEDLPTPK 265
H+PPGPPF P + VR G GGG GG GG GG GG G G WGGSNLG+DLPTPK
Sbjct: 98 HVPPGPPFHPNLNVVRVAGGGGGGGGGGGGGAGGGGGGEEGAGKDGWGGSNLGKDLPTPK 157
Query: 266 EICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPK-TAAAVDNDDNVELE 324
EIC+GLDK+VIGQ++AKKVLSVAVYNHYKRIYH +L+KGSGA+ D+DD VELE
Sbjct: 158 EICQGLDKYVIGQDRAKKVLSVAVYNHYKRIYHKSLQKGSGADLGGFDGEADDDDGVELE 217
Query: 325 KSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA--------------GYVGED 370
KSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQA GYVGED
Sbjct: 218 KSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAIPKVKLNSCAFLQAGYVGED 277
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VESILYKLLA A+FNV+AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG
Sbjct: 278 VESILYKLLAVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 337
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
TIVNVPEKGARKHPRGD+IQ+DTKDILFICGGAF+DLEKTISERRQDSSIGFGAPVRANM
Sbjct: 338 TIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANM 397
Query: 491 RA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
RA G++ A VTSSLLESVES DLIAYGLIPEF+GRFPILVSL AL EDQLV+VL EPKNA
Sbjct: 398 RAGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLMEPKNA 457
Query: 550 LGQ 552
LG+
Sbjct: 458 LGK 460
>gi|42562485|ref|NP_564423.3| ATP-dependent Clp protease [Arabidopsis thaliana]
gi|51536496|gb|AAU05486.1| At1g33360 [Arabidopsis thaliana]
gi|53850505|gb|AAU95429.1| At1g33360 [Arabidopsis thaliana]
gi|332193466|gb|AEE31587.1| ATP-dependent Clp protease [Arabidopsis thaliana]
Length = 656
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 350/593 (59%), Positives = 399/593 (67%), Gaps = 98/593 (16%)
Query: 1 MSGIWRWKRQLSDIASSSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIGIQ 60
MSG+WR R L +A + S PV+ L + +G RR+ IQ
Sbjct: 1 MSGLWRL-RNLKSLALHARSIS-----------PVSNLYSLELGSCP---RRR-----IQ 40
Query: 61 ERYKWDHGG-----DTF------RKIRAEANCPRCSKHMDLLFSN----PSNLSPPVPAP 105
ER+K + GG D F RK+RAE NCPRCSK MDLLFSN SNL
Sbjct: 41 ERFKSEQGGGGGGGDDFPVPVTRRKLRAEPNCPRCSKQMDLLFSNRQFPSSNLLQRPDDS 100
Query: 106 AVDGSG---GYQAVNICPNCKSAYYFRPHRIAPLQGSFVEI------------------S 144
G+G +Q+VN CP CK+AY F P ++PLQG+F+EI +
Sbjct: 101 DSSGAGDKTNFQSVNFCPTCKTAYGFNPRGVSPLQGTFIEIGRVQSPTTTTTNATTSKST 160
Query: 145 ISANNHN---NNNTNKRLKKLSSGGSGKLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNG 201
H+ N N R KL S SFWDTLRSYG E P S + +
Sbjct: 161 RKQQQHSKDPNQGFNYR-NKLRS------SFWDTLRSYGAEPPEDWSPPPPHSPLNSSPP 213
Query: 202 NGLAVHLPPGP-PFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGED 260
N + V+ P +P +AV + SRWGG+ LG D
Sbjct: 214 NTIPVNASPSAVDTSPLPDAVNDV-------------------------SRWGGAGLGRD 248
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
PTPKEICK LDKFVIGQ +AKKVLSVAVYNHYKRIYH ++KKGS A+P +D+DDN
Sbjct: 249 FPTPKEICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKKGSAAQP-----IDDDDN 303
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVG+DVESIL+KLL
Sbjct: 304 VELDKSNVLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLT 363
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
AEFNV+AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLK+LEGTIVNVP KGA
Sbjct: 364 VAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKLLEGTIVNVPGKGA 423
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM-RAGVTDAAV 499
RKHPRGD IQ+DTKDILFICGGAFVDLEKTI +RRQDSSIGFGAPVRANM +GVT A+
Sbjct: 424 RKHPRGDHIQIDTKDILFICGGAFVDLEKTIVDRRQDSSIGFGAPVRANMATSGVTSGAI 483
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
TSSLLESVES+DL AYGLIPEFVGRFPILVSL+ALTEDQL++VL EPKNALG+
Sbjct: 484 TSSLLESVESADLTAYGLIPEFVGRFPILVSLSALTEDQLIRVLVEPKNALGK 536
>gi|297734727|emb|CBI16961.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 335/492 (68%), Positives = 364/492 (73%), Gaps = 86/492 (17%)
Query: 88 MDLLFSN---PSNLSPPVPAPAVDGSGG---YQAVNICPNCKSAYYFRPHRIAPLQGSFV 141
MDLLFSN PSN SP VP + + G YQAVN+CPNCK+AYYFRP++IAPLQGSFV
Sbjct: 1 MDLLFSNRHFPSNFSPAVPTDSSNSKGSGGSYQAVNLCPNCKTAYYFRPYKIAPLQGSFV 60
Query: 142 EISISANNHNNNNTNKRLKKLSSGGSGKLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNG 201
EI + + RL+ +SFW+TLRSYGG+ P S G
Sbjct: 61 EIGSKNGGGHEEDYGSRLR---------MSFWETLRSYGGDPPENWPPPPPPPS-----G 106
Query: 202 NGLAVHLPPGPPFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDL 261
NGLA NG WGGSNLG+DL
Sbjct: 107 NGLA---------------------RNG----------------------WGGSNLGKDL 123
Query: 262 PTPKEICKGLDKFVIGQEKAKK--------------------VLSVAVYNHYKRIYHANL 301
PTPKEICKGLDKFVIGQE+AKK VLSVAVYNHYKRIYH +L
Sbjct: 124 PTPKEICKGLDKFVIGQERAKKLDFIPFSDFLVRSNWCQTWEVLSVAVYNHYKRIYHGSL 183
Query: 302 KKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTL 361
+KGSGAE T+ +DD+VELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTL
Sbjct: 184 QKGSGAESGTSEV--DDDSVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTL 241
Query: 362 TQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQ 421
TQAGYVGEDVESILYKLL AEFNV+AAQQGMVYIDEVDKITKKAESLN+SRDVSGEGVQ
Sbjct: 242 TQAGYVGEDVESILYKLLTVAEFNVQAAQQGMVYIDEVDKITKKAESLNLSRDVSGEGVQ 301
Query: 422 QALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIG 481
QALLKMLEGTIVNVPEKGARKHPRGD+IQ+DTKDILFICGGAFVDLEKTIS+RRQDSSIG
Sbjct: 302 QALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISDRRQDSSIG 361
Query: 482 FGAPVRANMRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLV 540
FGAPVRANMR G+T+A VTSSLLESVESSDLIAYGLIPEF+GRFPILVSL+ALTEDQLV
Sbjct: 362 FGAPVRANMRTGGLTNAVVTSSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEDQLV 421
Query: 541 KVLTEPKNALGQ 552
KVLTEPKNALG+
Sbjct: 422 KVLTEPKNALGK 433
>gi|12322572|gb|AAG51286.1|AC027035_9 CLP protease regulatory subunit CLPX, putative [Arabidopsis
thaliana]
Length = 650
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 342/588 (58%), Positives = 398/588 (67%), Gaps = 82/588 (13%)
Query: 1 MSGIWRWKRQLSDIASSSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIGIQ 60
MSG+WR R L +A + S PV+ L + +G RR+ IQ
Sbjct: 1 MSGLWRL-RNLKSLALHARSIS-----------PVSNLYSLELGSCP---RRR-----IQ 40
Query: 61 ERYKWDHGG-----DTF------RKIRAEANCPRCSKHMDLLFSN---PSNLSPPVPAPA 106
ER+K + GG D F RK+RAE NCPRCSK MDLLFSN PS+ P +
Sbjct: 41 ERFKSEQGGGGGGGDDFPVPVTRRKLRAEPNCPRCSKQMDLLFSNRQFPSSNLLQRPDDS 100
Query: 107 VDGSGG-----YQAVNICPNCKSAYYFRPHRIAPLQGSFVEI--------------SISA 147
D SG +Q+VN CP CK+AY F P ++PLQG+F+EI + +
Sbjct: 101 -DSSGAGDKTNFQSVNFCPTCKTAYGFNPRGVSPLQGTFIEIGRVQSPTTTTTNATTSKS 159
Query: 148 NNHNNNNTNKRLKKLSSGGSGKLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAVH 207
++ + + + SFWDTLRSYG E P S + + N + V+
Sbjct: 160 TRKQQQHSKDPNQGFNYRNKLRSSFWDTLRSYGAEPPEDWSPPPPHSPLNSSPPNTIPVN 219
Query: 208 LPPGP-PFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKE 266
P +P +AV + SRWGG+ LG D PTPKE
Sbjct: 220 ASPSAVDTSPLPDAVNDV-------------------------SRWGGAGLGRDFPTPKE 254
Query: 267 ICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG-SGAEPKTAAAVDNDDNVELEK 325
ICK LDKFVIGQ +AKKVLSVAVYNHYKRIYH ++KKG + +A +D+DDNVEL+K
Sbjct: 255 ICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKKGLVLSLIHSAQPIDDDDNVELDK 314
Query: 326 SNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
SNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVG+DVESIL+KLL AEFN
Sbjct: 315 SNVLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLTVAEFN 374
Query: 386 VEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPR 445
V+AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLK+LEGTIVNVP KGARKHPR
Sbjct: 375 VQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKLLEGTIVNVPGKGARKHPR 434
Query: 446 GDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM-RAGVTDAAVTSSLL 504
GD IQ+DTKDILFICGGAFVDLEKTI +RRQDSSIGFGAPVRANM +GVT A+TSSLL
Sbjct: 435 GDHIQIDTKDILFICGGAFVDLEKTIVDRRQDSSIGFGAPVRANMATSGVTSGAITSSLL 494
Query: 505 ESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
ESVES+DL AYGLIPEFVGRFPILVSL+ALTEDQL++VL EPKNALG+
Sbjct: 495 ESVESADLTAYGLIPEFVGRFPILVSLSALTEDQLIRVLVEPKNALGK 542
>gi|12322385|gb|AAG51217.1|AC051630_14 CLP protease regulatory subunit CLPX, putative; 15869-19379
[Arabidopsis thaliana]
Length = 670
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 344/607 (56%), Positives = 401/607 (66%), Gaps = 100/607 (16%)
Query: 1 MSGIWRWKRQLSDIASSSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIGIQ 60
MSG+WR L ++ S ++ S PV+ L + +G RR+ IQ
Sbjct: 1 MSGLWR----LRNLKSLALHARS--------ISPVSNLYSLELGSCP---RRR-----IQ 40
Query: 61 ERYKWDHGG-----DTF------RKIRAEANCPRCSKHMDLLFSN----PSNLSPPVPAP 105
ER+K + GG D F RK+RAE NCPRCSK MDLLFSN SNL
Sbjct: 41 ERFKSEQGGGGGGGDDFPVPVTRRKLRAEPNCPRCSKQMDLLFSNRQFPSSNLLQRPDDS 100
Query: 106 AVDGSG---GYQAVNICPNCKSAYYFRPHRIAPLQGSFVEI--------------SISAN 148
G+G +Q+VN CP CK+AY F P ++PLQG+F+EI + +
Sbjct: 101 DSSGAGDKTNFQSVNFCPTCKTAYGFNPRGVSPLQGTFIEIGRVQSPTTTTTNATTSKST 160
Query: 149 NHNNNNTNKRLKKLSSGGSGKLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAVHL 208
++ + + + SFWDTLRSYG E P S + + N + V+
Sbjct: 161 RKQQQHSKDPNQGFNYRNKLRSSFWDTLRSYGAEPPEDWSPPPPHSPLNSSPPNTIPVNA 220
Query: 209 PPGP-PFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEI 267
P +P +AV + SRWGG+ LG D PTPKEI
Sbjct: 221 SPSAVDTSPLPDAVNDV-------------------------SRWGGAGLGRDFPTPKEI 255
Query: 268 CKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG----SGA---------------- 307
CK LDKFVIGQ +AKKVLSVAVYNHYKRIYH ++KKG S A
Sbjct: 256 CKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKKGLLHDSDALSPFNPLWFTLILWTL 315
Query: 308 EPKTAAA-VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
P++AA +D+DDNVEL+KSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGY
Sbjct: 316 NPRSAAQPIDDDDNVELDKSNVLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGY 375
Query: 367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
VG+DVESIL+KLL AEFNV+AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLK
Sbjct: 376 VGDDVESILHKLLTVAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 435
Query: 427 MLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV 486
+LEGTIVNVP KGARKHPRGD IQ+DTKDILFICGGAFVDLEKTI +RRQDSSIGFGAPV
Sbjct: 436 LLEGTIVNVPGKGARKHPRGDHIQIDTKDILFICGGAFVDLEKTIVDRRQDSSIGFGAPV 495
Query: 487 RANM-RAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTE 545
RANM +GVT A+TSSLLESVES+DL AYGLIPEFVGRFPILVSL+ALTEDQL++VL E
Sbjct: 496 RANMATSGVTSGAITSSLLESVESADLTAYGLIPEFVGRFPILVSLSALTEDQLIRVLVE 555
Query: 546 PKNALGQ 552
PKNALG+
Sbjct: 556 PKNALGK 562
>gi|449450117|ref|XP_004142810.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Cucumis sativus]
Length = 619
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 296/501 (59%), Positives = 352/501 (70%), Gaps = 70/501 (13%)
Query: 60 QERYKWDHGGDTFRKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVDGSGGYQAVNIC 119
Q+R+ W G + IRA+ NCPRCSK M ++FSN P+ + +G YQA+N+C
Sbjct: 56 QKRHSW-KGASDYDYIRADVNCPRCSKQMPVIFSNR-----PLSITGRE-TGVYQALNLC 108
Query: 120 PNCKSAYYFRPHRIAPLQGSFVEI-----SISANNHNNNNTNKRLKKLSSGGSGKLSFWD 174
PNCK+A+YFRP ++ PL G+F+EI + ++ +N +N+ K
Sbjct: 109 PNCKTAFYFRPLKLVPLHGTFIEIGRVKGARDLDHDADNESNQPTK-------------- 154
Query: 175 TLRSYGGELPPLPSGDVTSNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGPSNGGGSGG 234
GD+ +N + LPP R+ G GGS
Sbjct: 155 --------------GDIGANCADD-------FALPP-----------RRNGSC--GGSDD 180
Query: 235 NGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYK 294
N G S G + ++LG L TPKEI LDKFV+GQEKAKKVLSVAVYNHYK
Sbjct: 181 NLGSVESDG------VQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKVLSVAVYNHYK 234
Query: 295 RIYHANLKKGSGAEPKTAAAVDNDDN--VELEKSNVLLMGPTGSGKTLLAKTLARHVNVP 352
RIYH++L+K SG P ++NDDN VELEKSN+LLMGPTGSGKTLLAKTLAR VNVP
Sbjct: 235 RIYHSSLQKTSGQGP-LGIELENDDNETVELEKSNLLLMGPTGSGKTLLAKTLARVVNVP 293
Query: 353 FVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNIS 412
F IADAT LTQAGYVGEDVESILYKLL AEFNVEAAQ+G+VYIDEVDKITKK+ESLN
Sbjct: 294 FTIADATALTQAGYVGEDVESILYKLLLDAEFNVEAAQRGIVYIDEVDKITKKSESLNSG 353
Query: 413 RDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTIS 472
RDVSGEGVQQALLKMLEGT+V+VP+ GARKHPRGD+IQMDTK+ILFICGGAFV LEK IS
Sbjct: 354 RDVSGEGVQQALLKMLEGTVVDVPDTGARKHPRGDTIQMDTKNILFICGGAFVGLEKCIS 413
Query: 473 ERRQDSSIGFGAPVRANMRAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSL 531
+R+ DSSIGFGAPVRA+MR G +T+ VTSS+LE+VES DLI YGLIPEFVGR PILVSL
Sbjct: 414 DRQHDSSIGFGAPVRASMRTGKLTEDLVTSSMLENVESGDLITYGLIPEFVGRCPILVSL 473
Query: 532 TALTEDQLVKVLTEPKNALGQ 552
+AL EDQLV+VLT+PKNALG+
Sbjct: 474 SALDEDQLVQVLTKPKNALGK 494
>gi|18423503|ref|NP_568792.1| CLP protease regulatory subunit X [Arabidopsis thaliana]
gi|9759182|dbj|BAB09797.1| ATP-dependent Clp protease regulatory subunit CLPX [Arabidopsis
thaliana]
gi|14334860|gb|AAK59608.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX1
[Arabidopsis thaliana]
gi|23296603|gb|AAN13130.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX1
[Arabidopsis thaliana]
gi|332008960|gb|AED96343.1| CLP protease regulatory subunit X [Arabidopsis thaliana]
Length = 579
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 259/303 (85%), Positives = 283/303 (93%), Gaps = 2/303 (0%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH-ANLKKGSGAEPK 310
WGGSNLG D PTPKEICKGL+KFVIGQE+AKKVLSVAVYNHYKRIYH ++ K+ +G
Sbjct: 149 WGGSNLGSDFPTPKEICKGLNKFVIGQERAKKVLSVAVYNHYKRIYHESSQKRSAGETDS 208
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
TAA +DD VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGED
Sbjct: 209 TAAKPADDDMVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGED 268
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG
Sbjct: 269 VESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 328
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
TIVNVPEKGARKHPRGD+IQ+DTKDILFICGGAFVD+EKTISERR DSSIGFGAPVRANM
Sbjct: 329 TIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANM 388
Query: 491 RA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
RA GVT+AAV S+L+E+VESSDLIAYGLIPEFVGRFP+LVSL+ALTE+QL++VLTEPKNA
Sbjct: 389 RAGGVTNAAVASNLMETVESSDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNA 448
Query: 550 LGQ 552
LG+
Sbjct: 449 LGK 451
>gi|297792705|ref|XP_002864237.1| hypothetical protein ARALYDRAFT_918413 [Arabidopsis lyrata subsp.
lyrata]
gi|297310072|gb|EFH40496.1| hypothetical protein ARALYDRAFT_918413 [Arabidopsis lyrata subsp.
lyrata]
Length = 572
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 258/303 (85%), Positives = 282/303 (93%), Gaps = 2/303 (0%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH-ANLKKGSGAEPK 310
WGGSNLG D PTPKEICKGL+KFVIGQE+AKKVLSVAVYNHYKRIYH ++ K+ +G
Sbjct: 142 WGGSNLGSDFPTPKEICKGLNKFVIGQERAKKVLSVAVYNHYKRIYHESSQKRSAGETDS 201
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
TA +DD VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGED
Sbjct: 202 TAVKPADDDMVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGED 261
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG
Sbjct: 262 VESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 321
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
TIVNVPEKGARKHPRGD+IQ+DTKDILFICGGAFVD+EKTISERR DSSIGFGAPVRANM
Sbjct: 322 TIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANM 381
Query: 491 RA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
RA GVT+AAV S+L+E+VESSDLIAYGLIPEFVGRFP+LVSL+ALTE+QL++VLTEPKNA
Sbjct: 382 RAGGVTNAAVASNLMETVESSDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNA 441
Query: 550 LGQ 552
LG+
Sbjct: 442 LGK 444
>gi|2674203|gb|AAB88706.1| CLP protease regulatory subunit CLPX [Arabidopsis thaliana]
Length = 579
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 257/303 (84%), Positives = 281/303 (92%), Gaps = 2/303 (0%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH-ANLKKGSGAEPK 310
WGGSNLG D PTPKEICKGL+KFVIGQE+AKKVLSVAVYNHYKRIYH ++ K+ +G
Sbjct: 149 WGGSNLGSDFPTPKEICKGLNKFVIGQERAKKVLSVAVYNHYKRIYHESSQKRSAGETDS 208
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
TAA +DD VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGED
Sbjct: 209 TAAKPADDDMVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGED 268
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VESILYKLL A++NV AAQQG+VYIDEVDKITKKAESL ISRDVSGEGVQQALLKMLEG
Sbjct: 269 VESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESLYISRDVSGEGVQQALLKMLEG 328
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
TIVNVPEKGARKHPRGD+IQ+DTKDILFICGGAFVD+EKTISERR DSSIGFGAPVRANM
Sbjct: 329 TIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANM 388
Query: 491 RA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
RA GVT AAV S+L+E+VE+SDLIAYGLIPEFVGRFP+LVSL+ALTE+QL++VLTEPKNA
Sbjct: 389 RAGGVTTAAVASNLMETVETSDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNA 448
Query: 550 LGQ 552
LG+
Sbjct: 449 LGK 451
>gi|449456973|ref|XP_004146223.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Cucumis sativus]
Length = 571
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 258/302 (85%), Positives = 280/302 (92%), Gaps = 1/302 (0%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKT 311
WGGS+LG + PTPKEI KGLDKFVIGQE+AKKVLSV VYNHYKRIYH +L++ +G
Sbjct: 146 WGGSSLGPNFPTPKEIAKGLDKFVIGQERAKKVLSVGVYNHYKRIYHESLQRPTGDTFNN 205
Query: 312 AAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDV 371
A +DD VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDV
Sbjct: 206 KADAADDDKVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 265
Query: 372 ESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
ESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT
Sbjct: 266 ESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 325
Query: 432 IVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR 491
IVNVPEKGARKHPRG++IQ+DTKDILFICGGAF+DLEKTISERRQDSS+GFGAPVRANMR
Sbjct: 326 IVNVPEKGARKHPRGENIQIDTKDILFICGGAFIDLEKTISERRQDSSLGFGAPVRANMR 385
Query: 492 A-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A GVTDA VTSSLLE+VESSDLIAYGLIPEFVGRFPILVSL+ALTE+QLV+VLTEPKNAL
Sbjct: 386 AGGVTDAMVTSSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNAL 445
Query: 551 GQ 552
G+
Sbjct: 446 GK 447
>gi|359490703|ref|XP_003634146.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
isoform 2 [Vitis vinifera]
Length = 577
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 259/302 (85%), Positives = 280/302 (92%), Gaps = 6/302 (1%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKT 311
WGGSNLG + PTPKEIC+GLDKFVIGQE+AKKVLSVAVYNHYKRIYH +L+K
Sbjct: 154 WGGSNLGHNFPTPKEICRGLDKFVIGQERAKKVLSVAVYNHYKRIYHQSLQKCD----DK 209
Query: 312 AAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDV 371
A A DND +VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDV
Sbjct: 210 AEATDND-SVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 268
Query: 372 ESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
ESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLN+SRDVSGEGVQQALLKMLEGT
Sbjct: 269 ESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGT 328
Query: 432 IVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR 491
+VNVPEKGARKHPRGD+IQ+DTKDILFICGGAF+DLEKTISERRQDSSIGFGAPVRANMR
Sbjct: 329 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMR 388
Query: 492 A-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
G TDAAV SSLLE+VESSDLI+YGLIPEFVGRFPILVSL+ALTE+QLV+VLTEPKNAL
Sbjct: 389 TGGPTDAAVASSLLETVESSDLISYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKNAL 448
Query: 551 GQ 552
G+
Sbjct: 449 GK 450
>gi|225455378|ref|XP_002272792.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
isoform 1 [Vitis vinifera]
Length = 583
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 259/304 (85%), Positives = 280/304 (92%), Gaps = 4/304 (1%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKK--GSGAEP 309
WGGSNLG + PTPKEIC+GLDKFVIGQE+AKKVLSVAVYNHYKRIYH +L+K
Sbjct: 154 WGGSNLGHNFPTPKEICRGLDKFVIGQERAKKVLSVAVYNHYKRIYHQSLQKWPAEDTSD 213
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
A A DND +VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGE
Sbjct: 214 DKAEATDND-SVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGE 272
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLN+SRDVSGEGVQQALLKMLE
Sbjct: 273 DVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLE 332
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+VNVPEKGARKHPRGD+IQ+DTKDILFICGGAF+DLEKTISERRQDSSIGFGAPVRAN
Sbjct: 333 GTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRAN 392
Query: 490 MRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKN 548
MR G TDAAV SSLLE+VESSDLI+YGLIPEFVGRFPILVSL+ALTE+QLV+VLTEPKN
Sbjct: 393 MRTGGPTDAAVASSLLETVESSDLISYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKN 452
Query: 549 ALGQ 552
ALG+
Sbjct: 453 ALGK 456
>gi|302143904|emb|CBI23009.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 258/304 (84%), Positives = 279/304 (91%), Gaps = 4/304 (1%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKK--GSGAEP 309
WGGSNLG + PTPKEIC+GLDKFVIGQE+AKKVLSVAVYNHYKRIYH +L+K
Sbjct: 154 WGGSNLGHNFPTPKEICRGLDKFVIGQERAKKVLSVAVYNHYKRIYHQSLQKWPAEDTSD 213
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
A A DND +VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQA YVGE
Sbjct: 214 DKAEATDND-SVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQARYVGE 272
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLN+SRDVSGEGVQQALLKMLE
Sbjct: 273 DVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLE 332
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+VNVPEKGARKHPRGD+IQ+DTKDILFICGGAF+DLEKTISERRQDSSIGFGAPVRAN
Sbjct: 333 GTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRAN 392
Query: 490 MRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKN 548
MR G TDAAV SSLLE+VESSDLI+YGLIPEFVGRFPILVSL+ALTE+QLV+VLTEPKN
Sbjct: 393 MRTGGPTDAAVASSLLETVESSDLISYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKN 452
Query: 549 ALGQ 552
ALG+
Sbjct: 453 ALGK 456
>gi|297739450|emb|CBI29632.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/296 (87%), Positives = 277/296 (93%), Gaps = 4/296 (1%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTPKEICKGLD+FVIGQE+AKKVLSVAVYNHYKRI+HA+L+K SGAE T A +DNDD
Sbjct: 124 ELPTPKEICKGLDEFVIGQEQAKKVLSVAVYNHYKRIHHASLQKESGAES-TKAEIDNDD 182
Query: 320 N--VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
N VELEKSNVLL+GPTGSGKTLLAKTLAR VNVPFVIADATTLTQA YVGEDVESIL+K
Sbjct: 183 NDSVELEKSNVLLLGPTGSGKTLLAKTLARVVNVPFVIADATTLTQASYVGEDVESILHK 242
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL AEFNVEAAQQG+VYIDEVDKITKKAESLN RDVSGEGVQQALLKMLEGTIVNVP+
Sbjct: 243 LLMVAEFNVEAAQQGIVYIDEVDKITKKAESLNTGRDVSGEGVQQALLKMLEGTIVNVPD 302
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-GVTD 496
KG RKHPRGD+IQ+DTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR G+TD
Sbjct: 303 KGGRKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRTGGLTD 362
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
A VTSSLLESVES DLIAYGLIPEF+GRFPILVSL+AL EDQLV+VLTEPKNALG+
Sbjct: 363 AVVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGK 418
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 60/85 (70%), Gaps = 6/85 (7%)
Query: 60 QERYKWD-HGGDTFRKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVDGSGGYQAVNI 118
Q R K D + GDT+ IRA+ NCPRCS M +LFSN P+ A + G YQA+N+
Sbjct: 39 QRRLKSDKYSGDTYDHIRADVNCPRCSSQMSILFSNR-----PLSITAAEPPGVYQALNL 93
Query: 119 CPNCKSAYYFRPHRIAPLQGSFVEI 143
CPNC++A+YFRP ++APLQGSF+EI
Sbjct: 94 CPNCRTAFYFRPFKLAPLQGSFIEI 118
>gi|356576571|ref|XP_003556404.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Glycine max]
Length = 513
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 256/303 (84%), Positives = 282/303 (93%), Gaps = 7/303 (2%)
Query: 252 W-GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPK 310
W GGSNLG D PTPKEICKGLDKFVIGQ +AKKVLSVAVYNHY+RIY +GS A+
Sbjct: 90 WVGGSNLGRDFPTPKEICKGLDKFVIGQHRAKKVLSVAVYNHYQRIY-----QGSEADEG 144
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
+ +D+ D+VELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGED
Sbjct: 145 LSQGLDDGDDVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGED 204
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VESILYKLLA AEFNV+AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG
Sbjct: 205 VESILYKLLAAAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 264
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T+VNVPE+GARKHPRGD+IQ+DTK+ILFICGGAF+DLEKTISERRQDSSIGFG+PVR+NM
Sbjct: 265 TMVNVPERGARKHPRGDNIQIDTKNILFICGGAFIDLEKTISERRQDSSIGFGSPVRSNM 324
Query: 491 RA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
R GVT+AAVTSSLLESVES+DLIAYGLIPEF+GRFPIL+SL+ALTEDQL++VLTEPKNA
Sbjct: 325 RTGGVTNAAVTSSLLESVESADLIAYGLIPEFIGRFPILISLSALTEDQLMQVLTEPKNA 384
Query: 550 LGQ 552
L +
Sbjct: 385 LAK 387
>gi|255551247|ref|XP_002516670.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
gi|223544165|gb|EEF45689.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
Length = 565
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 255/304 (83%), Positives = 282/304 (92%), Gaps = 4/304 (1%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP-- 309
WGGS+LG + PTPKEIC+GLDKFVIGQ++AKKVLSVAVYNHYKRIYH +++K S +
Sbjct: 137 WGGSDLGNNFPTPKEICRGLDKFVIGQDRAKKVLSVAVYNHYKRIYHDSIQKWSAGDSGN 196
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
A A+D +D VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGE
Sbjct: 197 NKAEAMD-EDGVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGE 255
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVESILYKLL A++NV AAQQG+VYIDEVDKITKKAES+NISRDVSGEGVQQALLKMLE
Sbjct: 256 DVESILYKLLMAADYNVAAAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLE 315
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+VNVPEKGARKHPRGD+IQ+DTKDILFICGGAF+DLEKTISERRQDSSIGFGAPVRAN
Sbjct: 316 GTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRAN 375
Query: 490 MRAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKN 548
MR G VT AAVTSSLLE+VES DLI+YGLIPEFVGRFP+LVSL+ALTE+QLV+VLTEPKN
Sbjct: 376 MRMGSVTSAAVTSSLLETVESGDLISYGLIPEFVGRFPVLVSLSALTENQLVQVLTEPKN 435
Query: 549 ALGQ 552
ALG+
Sbjct: 436 ALGK 439
>gi|356516065|ref|XP_003526717.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Glycine max]
Length = 524
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 259/321 (80%), Positives = 285/321 (88%), Gaps = 4/321 (1%)
Query: 236 GGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR 295
GGGG+ G WGGSNLG PTPKEICKGLDKFVIGQE+AKKVLSVAVYNHYKR
Sbjct: 80 AGGGGAPNSGDSKEGCWGGSNLGNSFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKR 139
Query: 296 IYH-ANLKKGSGAEPKTAAAVD--NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVP 352
I++ +L K + + VD +DD VELEKSN+LLMGPTGSGKTLLAKTLAR VNVP
Sbjct: 140 IFNETSLPKWPAGDSDNSVKVDAADDDRVELEKSNILLMGPTGSGKTLLAKTLARFVNVP 199
Query: 353 FVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNIS 412
FVIADAT+LTQAGYVGEDVESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLNIS
Sbjct: 200 FVIADATSLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNIS 259
Query: 413 RDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTIS 472
RDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGD+IQ+DTK+ILFICGGAFVDLEKTIS
Sbjct: 260 RDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKNILFICGGAFVDLEKTIS 319
Query: 473 ERRQDSSIGFGAPVRANMRAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSL 531
ERR DSSIGFGAP+RANMR G VT+AAV SSLLE+VESSDLIAYGLIPEFVGRFPILVSL
Sbjct: 320 ERRHDSSIGFGAPIRANMRTGKVTEAAVASSLLETVESSDLIAYGLIPEFVGRFPILVSL 379
Query: 532 TALTEDQLVKVLTEPKNALGQ 552
+ALTE+QL++VL+EPKNALG+
Sbjct: 380 SALTENQLIQVLSEPKNALGK 400
>gi|224132768|ref|XP_002321405.1| predicted protein [Populus trichocarpa]
gi|222868401|gb|EEF05532.1| predicted protein [Populus trichocarpa]
Length = 403
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 251/303 (82%), Positives = 273/303 (90%), Gaps = 2/303 (0%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP-K 310
WGGSNLG PTPKEICK LD FVIGQ +AKKVLSVAVYNHYKRIY ++KK S +
Sbjct: 1 WGGSNLGSSFPTPKEICKALDNFVIGQRRAKKVLSVAVYNHYKRIYLESVKKWSNTDSGN 60
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
+ + +DD VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQA YVGED
Sbjct: 61 EKSDIMDDDGVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQARYVGED 120
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VESILYKLL A++NV AAQQG++YIDE+DKITKKAES+NISRDVSGEGVQQALLKMLEG
Sbjct: 121 VESILYKLLTAADYNVAAAQQGIIYIDEIDKITKKAESVNISRDVSGEGVQQALLKMLEG 180
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
TIVNVPEKGARKHPRGD+IQ+DTKDILFICGGAF+DLEKTISERRQDSSIGFGAPVRANM
Sbjct: 181 TIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANM 240
Query: 491 RA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
R GVT AVTSSLLE+ ESSDL++YGLIPEFVGRFPILVSL ALTEDQLV+VLTEPKNA
Sbjct: 241 RTGGVTSTAVTSSLLETAESSDLVSYGLIPEFVGRFPILVSLAALTEDQLVQVLTEPKNA 300
Query: 550 LGQ 552
LG+
Sbjct: 301 LGK 303
>gi|356509253|ref|XP_003523365.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Glycine max]
Length = 524
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 255/321 (79%), Positives = 282/321 (87%), Gaps = 5/321 (1%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
GGG + G WGGSNLG PTPKEICKGLDKFVIGQE+AKKVLSVAVYNHYKRI
Sbjct: 80 GGGAAPNSGDSKEGCWGGSNLGNSFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRI 139
Query: 297 YH--ANLKKGSGAEPKTAAAVD--NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVP 352
++ ++ K +G D +DD VELEKSN+LLMGPTGSGKTLLAKTLAR VNVP
Sbjct: 140 FNETSSSKWPAGDSDNNNVKTDAVDDDRVELEKSNILLMGPTGSGKTLLAKTLARFVNVP 199
Query: 353 FVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNIS 412
FVIADAT+LTQAGYVGEDVESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLNIS
Sbjct: 200 FVIADATSLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNIS 259
Query: 413 RDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTIS 472
RDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGD+IQ+DTK+ILFICGGAFVDLEKTIS
Sbjct: 260 RDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKNILFICGGAFVDLEKTIS 319
Query: 473 ERRQDSSIGFGAPVRANMRAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSL 531
E R DSSIGFGAP+RANMR G VT+AAV SSLL++VESSDL+AYGLIPEFVGRFPILVSL
Sbjct: 320 ESRHDSSIGFGAPIRANMRTGKVTEAAVASSLLQTVESSDLVAYGLIPEFVGRFPILVSL 379
Query: 532 TALTEDQLVKVLTEPKNALGQ 552
+ALTE+QL++VLTEPKNALG+
Sbjct: 380 SALTENQLIQVLTEPKNALGK 400
>gi|449515470|ref|XP_004164772.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent Clp protease
ATP-binding subunit ClpX-like [Cucumis sativus]
Length = 571
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 253/302 (83%), Positives = 275/302 (91%), Gaps = 1/302 (0%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKT 311
WGGS+LG + PTPKEI KGLDKFVIGQE+AKKVLSV VYNHYKRIYH +L++ +G
Sbjct: 146 WGGSSLGPNFPTPKEIAKGLDKFVIGQERAKKVLSVGVYNHYKRIYHESLQRPTGDTFNN 205
Query: 312 AAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDV 371
A +DD VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDV
Sbjct: 206 KADAADDDKVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 265
Query: 372 ESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
ESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT
Sbjct: 266 ESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 325
Query: 432 IVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR 491
IVNVPEKGARKHPRG++IQ+DTKDILFICG + L KTISERRQDSS+GFGAPVRANMR
Sbjct: 326 IVNVPEKGARKHPRGENIQIDTKDILFICGVPSLXLGKTISERRQDSSLGFGAPVRANMR 385
Query: 492 A-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A GVTDA VTSSLLE+VESSDLIAYGLIPEFVGRFPILVSL+ALTE+QLV+VLTEPKNAL
Sbjct: 386 AGGVTDAMVTSSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNAL 445
Query: 551 GQ 552
G+
Sbjct: 446 GK 447
>gi|168043143|ref|XP_001774045.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674591|gb|EDQ61097.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 243/302 (80%), Positives = 276/302 (91%), Gaps = 11/302 (3%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKT 311
WGGS LG+DLPTP+EIC+ LDKFV+GQE+AKK+LSVAVYNHYKRIYH +++KGS
Sbjct: 1 WGGSFLGKDLPTPREICQALDKFVVGQERAKKILSVAVYNHYKRIYHESVQKGS------ 54
Query: 312 AAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDV 371
+ DD VELEKSNVLLMGPTGSGKTLLAKTLAR VNVPF+IADATTLTQAGYVGEDV
Sbjct: 55 ----EEDDVVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFIIADATTLTQAGYVGEDV 110
Query: 372 ESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
ESILYKLL +EFNV AAQQG+VYIDEVDKITKKAES++ISRDVSGEGVQQALLKMLEGT
Sbjct: 111 ESILYKLLMVSEFNVPAAQQGIVYIDEVDKITKKAESVSISRDVSGEGVQQALLKMLEGT 170
Query: 432 IVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR 491
IVNVPEKGARKHPRGD IQ+DTKDILFICGGAF++L KT++ER+QDSSIGFG+PVRA+MR
Sbjct: 171 IVNVPEKGARKHPRGDHIQIDTKDILFICGGAFIELAKTVAERKQDSSIGFGSPVRASMR 230
Query: 492 AG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+TD+A+TSSLLE VESSDLI+YGLIPEF+GRFP+LVSL+AL EDQLV+VLTEP+NAL
Sbjct: 231 GNKLTDSAITSSLLEMVESSDLISYGLIPEFIGRFPVLVSLSALNEDQLVQVLTEPRNAL 290
Query: 551 GQ 552
G+
Sbjct: 291 GK 292
>gi|168031008|ref|XP_001768014.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680856|gb|EDQ67289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 244/309 (78%), Positives = 282/309 (91%), Gaps = 9/309 (2%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKK--VLSVAVYNHYKRIYHANLKKGSGAEP 309
WGGS+LG+ LPTP+EIC+ LDKFV+GQE+AKK +LSVAVYNHYKRIY +++KG+ A+P
Sbjct: 1 WGGSSLGKVLPTPREICQALDKFVVGQEQAKKARILSVAVYNHYKRIYFESMRKGN-AKP 59
Query: 310 KT----AAAVDNDDN-VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+ V+ ++N VELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADAT+LTQA
Sbjct: 60 TNEGFGVSEVECEENDVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATSLTQA 119
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVESILYKLL +AEFNV AAQQG++YIDEVDKITKKAES NISRDVSGEGVQQAL
Sbjct: 120 GYVGEDVESILYKLLVEAEFNVLAAQQGIIYIDEVDKITKKAESKNISRDVSGEGVQQAL 179
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LKMLEGT+VNVPEKGARKHPRG+ IQ+DTKDILFICGGAFV+LEK+I+ER+QDSSIGFGA
Sbjct: 180 LKMLEGTVVNVPEKGARKHPRGEHIQIDTKDILFICGGAFVELEKSIAERKQDSSIGFGA 239
Query: 485 PVRANMRAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVL 543
PVRANMR + DAA+TSSLLE+VESSDLI+YGLIPEF+GRFP++VSL+AL EDQLV+VL
Sbjct: 240 PVRANMRGNKLIDAAITSSLLETVESSDLISYGLIPEFIGRFPVIVSLSALDEDQLVQVL 299
Query: 544 TEPKNALGQ 552
TEP+NALG+
Sbjct: 300 TEPRNALGK 308
>gi|307135876|gb|ADN33742.1| ATP-dependent clp protease ATP-binding subunit clpx [Cucumis melo
subsp. melo]
Length = 571
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 250/310 (80%), Positives = 272/310 (87%), Gaps = 17/310 (5%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKT 311
WGGS+LG + PTPKEI KGLDKFVIGQ++AKKVLSV VYNHYKRIYH +L++ +G
Sbjct: 146 WGGSSLGPNFPTPKEIAKGLDKFVIGQDRAKKVLSVGVYNHYKRIYHESLQRPTGDAFNN 205
Query: 312 AAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDV 371
A +DD VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDV
Sbjct: 206 KADAADDDKVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 265
Query: 372 ESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
ESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT
Sbjct: 266 ESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 325
Query: 432 IVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR 491
IVNVPEKGARKHPRG++IQ+DTKDILFICGGAF+DLEKTISERRQDSS+GFGAPVRANMR
Sbjct: 326 IVNVPEKGARKHPRGENIQIDTKDILFICGGAFIDLEKTISERRQDSSLGFGAPVRANMR 385
Query: 492 AG-VTDAAVTSSLLESVESS--------DLIAYGLIPEFVGRFPILVSLTALTEDQLVKV 542
AG VTDA VTSS DLIAYGLIPEFVGRFPILVSL+ALTE+QLV+V
Sbjct: 386 AGGVTDAMVTSS--------LLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLVQV 437
Query: 543 LTEPKNALGQ 552
LTEPKNALG+
Sbjct: 438 LTEPKNALGK 447
>gi|224120816|ref|XP_002318424.1| predicted protein [Populus trichocarpa]
gi|222859097|gb|EEE96644.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/325 (75%), Positives = 274/325 (84%), Gaps = 24/325 (7%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKT 311
WGGS LG PTPK+ICK LDKFVIGQ++AKKVLSVAVYNHYKRI+ ++KK S
Sbjct: 1 WGGSKLGSSFPTPKDICKALDKFVIGQQRAKKVLSVAVYNHYKRIHLESVKKWSVLFLSM 60
Query: 312 A-----------------------AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARH 348
A A +++ VELEKSN+LLMGPTGSGKTLLAKTLAR
Sbjct: 61 ALVNPFFPFPVTVMVCLYFPCNEKAETMDEEEVELEKSNILLMGPTGSGKTLLAKTLARF 120
Query: 349 VNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAES 408
VNVPFVIADATTLTQA YVGEDVES+LYKLL A++NV AAQQG++YIDEVDKITKKAES
Sbjct: 121 VNVPFVIADATTLTQARYVGEDVESMLYKLLTAADYNVAAAQQGIIYIDEVDKITKKAES 180
Query: 409 LNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLE 468
+NISRDVSGEGVQQALLKMLEGT+VNVP+K ARKHPRGD+IQ++TKDILFICGGAF+DLE
Sbjct: 181 VNISRDVSGEGVQQALLKMLEGTVVNVPDKEARKHPRGDNIQINTKDILFICGGAFIDLE 240
Query: 469 KTISERRQDSSIGFGAPVRANMRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPI 527
KTISERRQDSSIGFGAPVRANMR GVT AA+TSSLLE+ ESSDL++YGLIPEFVGRFPI
Sbjct: 241 KTISERRQDSSIGFGAPVRANMRTGGVTSAAMTSSLLETAESSDLVSYGLIPEFVGRFPI 300
Query: 528 LVSLTALTEDQLVKVLTEPKNALGQ 552
LVSL+ALTEDQLV+VLTEPKNALG+
Sbjct: 301 LVSLSALTEDQLVQVLTEPKNALGK 325
>gi|255573808|ref|XP_002527823.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
gi|223532747|gb|EEF34526.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
Length = 603
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/301 (82%), Positives = 270/301 (89%), Gaps = 6/301 (1%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
L +LPTPKEICKGLD+FVIGQ++AKKVL+VAVYNHYKRIYH + +K SGA+ +
Sbjct: 177 LENELPTPKEICKGLDEFVIGQDRAKKVLAVAVYNHYKRIYHGSKRKESGADMGYTDS-Q 235
Query: 317 NDDN--VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
NDDN VEL+KSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESI
Sbjct: 236 NDDNEIVELDKSNVLLMGPTGSGKTLLAKTLARVVNVPFVIADATTLTQAGYVGEDVESI 295
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
LYKLLA +EFNVEAAQ+G++YIDEVDKITKKAES NI RDVSGEGVQQALLKMLEGTIVN
Sbjct: 296 LYKLLAASEFNVEAAQRGIIYIDEVDKITKKAESSNIGRDVSGEGVQQALLKMLEGTIVN 355
Query: 435 --VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA 492
VP+KG RKHPRGD IQ+DTKDILFICGGAFVDLEKTISERRQD+SIGFGAPVR NMR
Sbjct: 356 VPVPDKGPRKHPRGDPIQIDTKDILFICGGAFVDLEKTISERRQDASIGFGAPVRTNMRT 415
Query: 493 G-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALG 551
G + DA V SSLLESVES DL+AYGLIPEFVGRFPILVSL+AL EDQLV+VL EPKNALG
Sbjct: 416 GRMIDAVVASSLLESVESGDLVAYGLIPEFVGRFPILVSLSALNEDQLVQVLVEPKNALG 475
Query: 552 Q 552
+
Sbjct: 476 K 476
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 59/103 (57%), Gaps = 15/103 (14%)
Query: 62 RYKWDHGGDTFRKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVDGSGGYQAVNICPN 121
R D + IRA NCPRCS M +LFSN P+ + +G +QAVN CPN
Sbjct: 52 RKVSDKSTTDYDHIRANVNCPRCSSQMPVLFSNR-----PLSITGRE-TGIFQAVNFCPN 105
Query: 122 CKSAYYFRPHRIAPLQGSFVEI---------SISANNHNNNNT 155
CK+A+YFRP ++ PLQGSF+E+ S S+NN N +T
Sbjct: 106 CKTAFYFRPFKLEPLQGSFIELGRVKGFDNGSCSSNNVNCKDT 148
>gi|168042097|ref|XP_001773526.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675228|gb|EDQ61726.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 433
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/319 (76%), Positives = 273/319 (85%), Gaps = 18/319 (5%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKK------------VLSVAVYNHYKRIYHA 299
WGG+ LG++LPTP+EI + LDKFV+GQEKAKK +LSVAVYNHYKRI++
Sbjct: 14 WGGAALGKELPTPREISQALDKFVVGQEKAKKAFSLFPSFNSLAILSVAVYNHYKRIHYE 73
Query: 300 NLKKGSGAEPKTAA-----AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFV 354
+L K + A + +D VELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFV
Sbjct: 74 SLLKSNIRLTDEGAGHSDMEDEENDGVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFV 133
Query: 355 IADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRD 414
IADATTLTQAGYVGEDVESILYKLL AEFNV AAQQG+VYIDEVDKITKKAE++NISRD
Sbjct: 134 IADATTLTQAGYVGEDVESILYKLLMAAEFNVPAAQQGIVYIDEVDKITKKAENMNISRD 193
Query: 415 VSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER 474
VSGEGVQQALLKMLEGT+VNVPEKGARKHPRGD IQ+DTKDILFICGGAF++LEKTI+ER
Sbjct: 194 VSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDHIQVDTKDILFICGGAFIELEKTIAER 253
Query: 475 RQDSSIGFGAPVRANMRAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTA 533
RQDSSIGFGAPVRANMR + +AAVTSSLLE VESSDLI+YGLIPEF+GRFP+LVSL A
Sbjct: 254 RQDSSIGFGAPVRANMRVNKLVNAAVTSSLLELVESSDLISYGLIPEFIGRFPVLVSLAA 313
Query: 534 LTEDQLVKVLTEPKNALGQ 552
L EDQLV+VLTEP+NALG+
Sbjct: 314 LNEDQLVQVLTEPRNALGK 332
>gi|357126242|ref|XP_003564797.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Brachypodium distachyon]
Length = 617
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/303 (78%), Positives = 272/303 (89%), Gaps = 2/303 (0%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKT 311
WGG++LGE+LPTP+E+C+ LD+FVIGQ KAKKVLSVAVYNHYKRIY+AN++KGS A
Sbjct: 191 WGGASLGEELPTPREMCRRLDEFVIGQGKAKKVLSVAVYNHYKRIYNANVQKGSAANSGC 250
Query: 312 AAAVDNDDN-VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
A ++D N VE++KSNVLLMGPTGSGKTLLAKTLAR VNVPF+IADAT+LTQAGYVGED
Sbjct: 251 PEAANDDQNTVEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFIIADATSLTQAGYVGED 310
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VESIL KLL +AE+NV+AAQQG+VYIDEVDKITKKAES N+SRDVSGEGVQQALLK+LEG
Sbjct: 311 VESILQKLLVEAEYNVQAAQQGIVYIDEVDKITKKAESANVSRDVSGEGVQQALLKILEG 370
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T+V +PEKG+RK+ R DSIQ+DTKDILFICGGAFVDL+KTISERRQDSSIGFGAP+R M
Sbjct: 371 TVVTIPEKGSRKNSRNDSIQIDTKDILFICGGAFVDLDKTISERRQDSSIGFGAPIRTKM 430
Query: 491 R-AGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
R +GVT+ VTSSLLESVES DL YGLIPEF+GR PILVSL AL EDQLV+VLTEPKN+
Sbjct: 431 RSSGVTNPTVTSSLLESVESGDLAKYGLIPEFIGRLPILVSLAALHEDQLVQVLTEPKNS 490
Query: 550 LGQ 552
L +
Sbjct: 491 LSR 493
>gi|115441503|ref|NP_001045031.1| Os01g0886600 [Oryza sativa Japonica Group]
gi|56784314|dbj|BAD82240.1| putative CLP protease regulatory subunit CLPX [Oryza sativa
Japonica Group]
gi|56785236|dbj|BAD82124.1| putative CLP protease regulatory subunit CLPX [Oryza sativa
Japonica Group]
gi|113534562|dbj|BAF06945.1| Os01g0886600 [Oryza sativa Japonica Group]
Length = 496
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/303 (77%), Positives = 270/303 (89%), Gaps = 2/303 (0%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPK- 310
WGG+ LGE+LPTP+E+C+ LD+FVIGQ KAKKVLSVAVYNHYKRIY+A ++KG
Sbjct: 68 WGGATLGEELPTPREMCRRLDEFVIGQGKAKKVLSVAVYNHYKRIYNATVQKGCSTNSGW 127
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
AA D+ +N+E++KSNVLLMGPTGSGKTLLAKTLAR VNVPF+IADAT+LTQAGYVGED
Sbjct: 128 LDAASDDQNNIEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFIIADATSLTQAGYVGED 187
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VESIL KLL AE+NV+AAQQG+VYIDEVDKITKKAES N+SRDVSGEGVQQALLK+LEG
Sbjct: 188 VESILQKLLVAAEYNVQAAQQGIVYIDEVDKITKKAESANVSRDVSGEGVQQALLKILEG 247
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T+V++PEKG+RK+ R +SIQ+DTKDILFICGGAFVDLEKTISERRQDSSIGFGAP+R NM
Sbjct: 248 TVVSIPEKGSRKNSRNESIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPIRINM 307
Query: 491 RAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
R+ VTD VTSSLLESVES DL YGLIPEF+GR PILVSLTAL EDQLV+VLTEPKN+
Sbjct: 308 RSSEVTDPMVTSSLLESVESGDLARYGLIPEFIGRLPILVSLTALNEDQLVQVLTEPKNS 367
Query: 550 LGQ 552
L +
Sbjct: 368 LSR 370
>gi|326489807|dbj|BAJ93977.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 619
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/303 (78%), Positives = 270/303 (89%), Gaps = 2/303 (0%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKT 311
WGG+ LGE+LPTP+E+C+ LD+FVIGQ KAKKVLSVAVYNHYKR+Y+A ++KGS
Sbjct: 191 WGGATLGEELPTPREMCRRLDEFVIGQGKAKKVLSVAVYNHYKRVYNATVQKGSADNSGC 250
Query: 312 A-AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
AA D+ DNVE++KSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADAT+LTQAGYVGED
Sbjct: 251 PDAANDDHDNVEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFVIADATSLTQAGYVGED 310
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VESIL KLL +AE+NV+AAQQG+VYIDEVDKITKKAES N+SRDVSGEGVQQALLK+LEG
Sbjct: 311 VESILQKLLVEAEYNVQAAQQGIVYIDEVDKITKKAESANVSRDVSGEGVQQALLKILEG 370
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T+V +PEKG+RK+ R DSIQ+DTKDILFICGGAFVDLEKTISERRQDSSIGFGAP+R N+
Sbjct: 371 TVVTIPEKGSRKNSRNDSIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPIRTNI 430
Query: 491 R-AGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
R +GVT VTSSLLESVES DL +GLIPEF+GR PILVSL AL EDQLV+VLTEPKN+
Sbjct: 431 RSSGVTSPTVTSSLLESVESGDLAKFGLIPEFIGRLPILVSLAALNEDQLVQVLTEPKNS 490
Query: 550 LGQ 552
L +
Sbjct: 491 LSR 493
>gi|357142782|ref|XP_003572692.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Brachypodium distachyon]
Length = 548
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/303 (78%), Positives = 273/303 (90%), Gaps = 2/303 (0%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLK-KGSGAEPK 310
WGGSNLG PTPKEIC+GLDKFVIGQE+AKKVLSVAVYNHYKRI + + +G +
Sbjct: 120 WGGSNLGRQFPTPKEICRGLDKFVIGQERAKKVLSVAVYNHYKRISCESFSSRSAGDSSE 179
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
+ + D VELEKSN+L+MGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGED
Sbjct: 180 SDTCTSDTDMVELEKSNILVMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGED 239
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VESILYKLLA A+F++ AAQQG+VYIDEVDKITKKAES+N+SRDVSGEGVQQALLKMLEG
Sbjct: 240 VESILYKLLAAADFDIAAAQQGIVYIDEVDKITKKAESMNLSRDVSGEGVQQALLKMLEG 299
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T+V+VPEKGAR+HPRGD+IQ+DTK+ILFICGGAFVDLEKTISERR DSSIGF APVR+NM
Sbjct: 300 TVVSVPEKGARRHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFQAPVRSNM 359
Query: 491 RAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
R G V +A +TS+LLE+VES DLIAYGLIPEFVGRFP+LVSL++L+EDQLV+VLT+PKNA
Sbjct: 360 RTGSVINAEITSTLLETVESGDLIAYGLIPEFVGRFPVLVSLSSLSEDQLVEVLTKPKNA 419
Query: 550 LGQ 552
LG+
Sbjct: 420 LGR 422
>gi|218189491|gb|EEC71918.1| hypothetical protein OsI_04712 [Oryza sativa Indica Group]
Length = 630
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/312 (75%), Positives = 271/312 (86%), Gaps = 11/312 (3%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVL---------SVAVYNHYKRIYHANLK 302
WGG+ LGE+LPTP+E+C+ LD+FVIGQ KAKKVL SVAVYNHYKRIY+A ++
Sbjct: 193 WGGATLGEELPTPREMCRRLDEFVIGQGKAKKVLEGACHNWVLSVAVYNHYKRIYNATVQ 252
Query: 303 KGSGAEPK-TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTL 361
KG AA D+ +N+E++KSNVLLMGPTGSGKTLLAKTLAR VNVPF+IADAT+L
Sbjct: 253 KGCSTNSGWLDAASDDQNNIEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFIIADATSL 312
Query: 362 TQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQ 421
TQAGYVGEDVESIL KLL AE+NV+AAQQG+VYIDEVDKITKKAES+N+SRDVSGEGVQ
Sbjct: 313 TQAGYVGEDVESILQKLLVAAEYNVQAAQQGIVYIDEVDKITKKAESVNVSRDVSGEGVQ 372
Query: 422 QALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIG 481
QALLK+LEGT+V++PEKG+RK+ R +SIQ+DTKDILFICGGAFVDLEKTISERRQDSSIG
Sbjct: 373 QALLKILEGTVVSIPEKGSRKNSRNESIQIDTKDILFICGGAFVDLEKTISERRQDSSIG 432
Query: 482 FGAPVRANMRAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLV 540
FGAP+R NMR+ VTD VTSSLLESVES DL YGLIPEF+GR PILVSLTAL EDQLV
Sbjct: 433 FGAPIRTNMRSSEVTDPMVTSSLLESVESGDLARYGLIPEFIGRLPILVSLTALNEDQLV 492
Query: 541 KVLTEPKNALGQ 552
+VLTEPKN+L +
Sbjct: 493 QVLTEPKNSLSR 504
>gi|222622641|gb|EEE56773.1| hypothetical protein OsJ_06335 [Oryza sativa Japonica Group]
Length = 479
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/300 (80%), Positives = 272/300 (90%), Gaps = 2/300 (0%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLK-KGSGAEPKTAA 313
SNLG PTPKEIC+GLDKFVIGQE+AKKVLSVAVYNHYKRI+ L + +G +T +
Sbjct: 53 SNLGRRFPTPKEICRGLDKFVIGQERAKKVLSVAVYNHYKRIHCELLSSRSAGDCSETDS 112
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
+ D VELEKSN+L+MGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVES
Sbjct: 113 CASDTDGVELEKSNILVMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVES 172
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
ILYKLLA A+F+V AAQQG+VYIDEVDKITKKAES+N+SRDVSGEGVQQALLKMLEGT+V
Sbjct: 173 ILYKLLAAADFDVAAAQQGIVYIDEVDKITKKAESINLSRDVSGEGVQQALLKMLEGTVV 232
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA- 492
+VPEKGAR+HPRGD+IQ+DTK+ILFICGGAFVDLEKTISERR DSSIGF AP+R+NMR
Sbjct: 233 SVPEKGARRHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFQAPIRSNMRTG 292
Query: 493 GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
GV +A +TSSLLESVES DLIAYGLIPEFVGRFPILVSL++L+EDQLV+VLT+PKNALG+
Sbjct: 293 GVINAEITSSLLESVESGDLIAYGLIPEFVGRFPILVSLSSLSEDQLVEVLTKPKNALGR 352
>gi|47847699|dbj|BAD21479.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX1
(CLPX) [Oryza sativa Japonica Group]
Length = 554
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/298 (80%), Positives = 270/298 (90%), Gaps = 2/298 (0%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLK-KGSGAEPKTAAAV 315
LG PTPKEIC+GLDKFVIGQE+AKKVLSVAVYNHYKRI+ L + +G +T +
Sbjct: 143 LGRRFPTPKEICRGLDKFVIGQERAKKVLSVAVYNHYKRIHCELLSSRSAGDCSETDSCA 202
Query: 316 DNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESIL 375
+ D VELEKSN+L+MGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESIL
Sbjct: 203 SDTDGVELEKSNILVMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESIL 262
Query: 376 YKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV 435
YKLLA A+F+V AAQQG+VYIDEVDKITKKAES+N+SRDVSGEGVQQALLKMLEGT+V+V
Sbjct: 263 YKLLAAADFDVAAAQQGIVYIDEVDKITKKAESINLSRDVSGEGVQQALLKMLEGTVVSV 322
Query: 436 PEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-GV 494
PEKGAR+HPRGD+IQ+DTK+ILFICGGAFVDLEKTISERR DSSIGF AP+R+NMR GV
Sbjct: 323 PEKGARRHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFQAPIRSNMRTGGV 382
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
+A +TSSLLESVES DLIAYGLIPEFVGRFPILVSL++L+EDQLV+VLT+PKNALG+
Sbjct: 383 INAEITSSLLESVESGDLIAYGLIPEFVGRFPILVSLSSLSEDQLVEVLTKPKNALGR 440
>gi|413936321|gb|AFW70872.1| ATP-dependent Clp protease ATP-binding subunit clpX [Zea mays]
Length = 559
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/299 (79%), Positives = 271/299 (90%), Gaps = 2/299 (0%)
Query: 256 NLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAV 315
NLG PTPKEIC+GLDKFVIGQ++AKKVLSVAVYNHYKRIY +L S A+ + +
Sbjct: 133 NLGRRFPTPKEICRGLDKFVIGQQRAKKVLSVAVYNHYKRIYCESLINRSAADCSQSDSC 192
Query: 316 DND-DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
+D D VELEKSN+L+MGPTGSGKTLLAKTLAR VNVPFVIADAT+LTQAGYVGEDVESI
Sbjct: 193 TSDTDMVELEKSNILVMGPTGSGKTLLAKTLARFVNVPFVIADATSLTQAGYVGEDVESI 252
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
LYKLLA A+F+V AAQQG+VYIDEVDKITKKAES+N+SRDVSGEGVQQALLKMLEGT+V+
Sbjct: 253 LYKLLAAADFDVAAAQQGIVYIDEVDKITKKAESINLSRDVSGEGVQQALLKMLEGTVVS 312
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-G 493
VPEKGAR+HPRGD+IQ+DTK+ILFICGGAFVDLEKTISERR DSSIGF A VR+NMR+ G
Sbjct: 313 VPEKGARRHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFRAQVRSNMRSGG 372
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
V +A +TSSLL+SVES DLIAYGLIPEFVGRFPILV L++L+EDQLV+VLTEPKNALG+
Sbjct: 373 VINAEITSSLLKSVESGDLIAYGLIPEFVGRFPILVGLSSLSEDQLVEVLTEPKNALGR 431
>gi|413951702|gb|AFW84351.1| hypothetical protein ZEAMMB73_159465 [Zea mays]
Length = 624
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/305 (76%), Positives = 269/305 (88%), Gaps = 6/305 (1%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKK---GSGAE 308
WGG++LG+DLPTP+E+C+ LD+FVIGQ KAKKVLSVAVYNHYKRIY+AN++K G+
Sbjct: 196 WGGASLGDDLPTPRELCRRLDEFVIGQAKAKKVLSVAVYNHYKRIYNANVQKEFAGNSGF 255
Query: 309 PKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVG 368
P A D+ + VE++KSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADAT+LTQAGYVG
Sbjct: 256 PD--AGHDDQNIVEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFVIADATSLTQAGYVG 313
Query: 369 EDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 428
EDVESIL KLL AE+NV+AAQQG+VYIDE+DKITKKAES N+SRDVSGEGVQQALLK+L
Sbjct: 314 EDVESILQKLLVAAEYNVQAAQQGIVYIDEIDKITKKAESANVSRDVSGEGVQQALLKIL 373
Query: 429 EGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA 488
EGT+V++PEKG+RK+ R DSIQ+DT DILFICGGAFVDLEKTISERRQDSSIGFGAP+R
Sbjct: 374 EGTVVSIPEKGSRKNSRNDSIQIDTTDILFICGGAFVDLEKTISERRQDSSIGFGAPIRT 433
Query: 489 NMR-AGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPK 547
NMR +G + VTSSLLESVES DL+ YGLIPEF+GR PILVSL AL E QLV+VLTEPK
Sbjct: 434 NMRSSGASCPMVTSSLLESVESGDLVRYGLIPEFIGRLPILVSLAALNEGQLVQVLTEPK 493
Query: 548 NALGQ 552
N+L +
Sbjct: 494 NSLSK 498
>gi|226491966|ref|NP_001147507.1| ATP-dependent Clp protease ATP-binding subunit clpX [Zea mays]
gi|195611856|gb|ACG27758.1| ATP-dependent Clp protease ATP-binding subunit clpX [Zea mays]
Length = 559
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/299 (79%), Positives = 271/299 (90%), Gaps = 2/299 (0%)
Query: 256 NLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAV 315
NLG PTPKEIC+GLDKFVIGQ++AKKVLSVAVYNHYKRIY +L S A+ + +
Sbjct: 133 NLGRRFPTPKEICRGLDKFVIGQQRAKKVLSVAVYNHYKRIYCESLINRSAADCSQSDSC 192
Query: 316 DND-DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
+D D VELEKSN+L+MGPTGSGKTLLAKTLAR VNVPFVIADAT+LTQAGYVGEDVESI
Sbjct: 193 TSDTDMVELEKSNILVMGPTGSGKTLLAKTLARFVNVPFVIADATSLTQAGYVGEDVESI 252
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
LYKLLA A+F+V AAQQG+VYIDEVDKITKKAES+N+SRDVSGEGVQQALLKMLEGT+V+
Sbjct: 253 LYKLLAAADFDVAAAQQGIVYIDEVDKITKKAESINLSRDVSGEGVQQALLKMLEGTVVS 312
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-G 493
VPEKGAR+HPRGD+IQ+DTK+ILFICGGAFVDLEKTISERR DSSIGF A VR+NMR+ G
Sbjct: 313 VPEKGARRHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFRAQVRSNMRSGG 372
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
V +A +TSSLL+SVES DLIAYGLIPEFVGRFPILV L++L+EDQLV+VLTEPKNALG+
Sbjct: 373 VINAEITSSLLKSVESGDLIAYGLIPEFVGRFPILVGLSSLSEDQLVEVLTEPKNALGR 431
>gi|224129802|ref|XP_002328806.1| predicted protein [Populus trichocarpa]
gi|222839104|gb|EEE77455.1| predicted protein [Populus trichocarpa]
Length = 521
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/315 (77%), Positives = 271/315 (86%), Gaps = 20/315 (6%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
L +LPTPKEICKGLD+FVIGQ+KAKKVLSVAVYNHYKRIYHA+ +K S A P + + +
Sbjct: 108 LERELPTPKEICKGLDEFVIGQDKAKKVLSVAVYNHYKRIYHASKQKKSHA-PWSHSDGE 166
Query: 317 NDDN--VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA-------GYV 367
ND+N +EL+KSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQA GYV
Sbjct: 167 NDENEFIELDKSNVLLMGPTGSGKTLLAKTLARIVNVPFVIADATTLTQASLFCCTAGYV 226
Query: 368 GEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKK-------AESLNISRDVSGEGV 420
GEDVESILYKLL AEFNVEAAQ+G+VYIDEVDKIT K A S +I RDVSGEGV
Sbjct: 227 GEDVESILYKLLVVAEFNVEAAQRGIVYIDEVDKITMKVYDFCVQAGSSSIGRDVSGEGV 286
Query: 421 QQALLKMLEGTIVNVP--EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS 478
QQALLKMLEGT++NVP +KG KHPRGD+IQ+DTKDILFICGGAFV+LEKTISERRQD+
Sbjct: 287 QQALLKMLEGTVINVPVPDKGPGKHPRGDTIQVDTKDILFICGGAFVNLEKTISERRQDA 346
Query: 479 SIGFGAPVRANMRAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTED 537
SIGFGAPVRANMRAG +T+A VTSSLLESVES DL+AYGLIPEFVGRFP+L SL AL ED
Sbjct: 347 SIGFGAPVRANMRAGAITNAMVTSSLLESVESGDLVAYGLIPEFVGRFPVLASLLALNED 406
Query: 538 QLVKVLTEPKNALGQ 552
QLV+VL EPKNALG+
Sbjct: 407 QLVQVLMEPKNALGK 421
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 6/69 (8%)
Query: 75 IRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYFRPHRIA 134
I+A+ NCPRC+ HM +LFSN P+ + +G YQAVN CP CK+A+YFRP ++
Sbjct: 1 IKADVNCPRCTSHMPVLFSNR-----PLSITGRE-TGIYQAVNFCPACKTAFYFRPFKLE 54
Query: 135 PLQGSFVEI 143
PLQG+F+E+
Sbjct: 55 PLQGNFIEL 63
>gi|147791350|emb|CAN75136.1| hypothetical protein VITISV_040753 [Vitis vinifera]
Length = 600
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/321 (74%), Positives = 261/321 (81%), Gaps = 21/321 (6%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKK-------- 303
WGGSNLG + PTPKEIC+GLDKFVIGQE+AKKVLSVAVYNHYKRIYH +L+K
Sbjct: 154 WGGSNLGHNFPTPKEICRGLDKFVIGQERAKKVLSVAVYNHYKRIYHZSLQKCDPTWRIR 213
Query: 304 -GSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKT--------LLAKTLARHVNVPFV 354
A A DND +VELEKSN+LLMGPTGSG T L + +
Sbjct: 214 PAEDTSDDKAEATDND-SVELEKSNILLMGPTGSGSTGSLSIIMLFLITWFTWYFHFFKD 272
Query: 355 IADATT--LTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNIS 412
D T L AGYVGEDVESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLN+S
Sbjct: 273 REDITCQNLGTAGYVGEDVESILYKLLMVADYNVVAAQQGIVYIDEVDKITKKAESLNLS 332
Query: 413 RDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTIS 472
RDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGD+IQ+DTKDILFICGGAF+DLEKTIS
Sbjct: 333 RDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTIS 392
Query: 473 ERRQDSSIGFGAPVRANMRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSL 531
ERRQDSSIGFGAPVRANMR G T AAV SSLLE+VESSDLI+YGLIPEFVGRFPILVSL
Sbjct: 393 ERRQDSSIGFGAPVRANMRTGGPTXAAVASSLLETVESSDLISYGLIPEFVGRFPILVSL 452
Query: 532 TALTEDQLVKVLTEPKNALGQ 552
+ALTE+QLV+VLTEPKNALG+
Sbjct: 453 SALTENQLVEVLTEPKNALGK 473
>gi|8978260|dbj|BAA98151.1| CLP protease regulatory subunit CLPX-like [Arabidopsis thaliana]
Length = 608
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/296 (77%), Positives = 260/296 (87%), Gaps = 4/296 (1%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP-KTAAAVDNDD 319
LPTPKEIC+GLD+FVIGQEKAKKVLSVAVYNHYKRIYHA+ KKGS +E DN D
Sbjct: 197 LPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYHASRKKGSASESYNIDMEDDNID 256
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSNVLL+GPTGSGKTLLAKTLAR VNVPF IADAT+LTQAGYVGEDVESILYKL
Sbjct: 257 HVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQAGYVGEDVESILYKLY 316
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV--PE 437
+A NVE AQ+G+VYIDEVDK+T K+ S N RDVSGEGVQQ+LLK+LEGT+V+V PE
Sbjct: 317 VEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIPE 376
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR-AGVTD 496
KG R+ PRGDSIQMDTKDILFICGGAF+DLEKT+SER+ D+SIGFGA VR NM +G++
Sbjct: 377 KGLRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLSS 436
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
AAVTSSLLES++S DL+AYGLIPEFVGR PILVSL+AL EDQLV+VLTEPK+ALG+
Sbjct: 437 AAVTSSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGK 492
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 8/75 (10%)
Query: 70 DTFRKIRAEANCPRCSKHMDLLFSN-PSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYF 128
D + IR++ NCPRCS M ++FSN P +L+ P G YQAVN C CK+A+YF
Sbjct: 72 DDYDHIRSDVNCPRCSAQMHVIFSNRPLSLTAREP-------GIYQAVNFCSQCKTAFYF 124
Query: 129 RPHRIAPLQGSFVEI 143
RP +++PLQGSF+E+
Sbjct: 125 RPFKLSPLQGSFIEL 139
>gi|240256421|ref|NP_568714.4| ATP-dependent Clp protease [Arabidopsis thaliana]
gi|332008480|gb|AED95863.1| ATP-dependent Clp protease [Arabidopsis thaliana]
Length = 608
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/296 (76%), Positives = 259/296 (87%), Gaps = 4/296 (1%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP-KTAAAVDNDD 319
LPTPKEIC+GLD+FVIGQEKAKKVLSVAVYNHYKRIYHA+ KKGS +E DN D
Sbjct: 197 LPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYHASRKKGSASESYNIDMEDDNID 256
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSNVLL+GPTGSGKTLLAKTLAR VNVPF IADAT+LTQA YVGEDVESILYKL
Sbjct: 257 HVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQASYVGEDVESILYKLY 316
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV--PE 437
+A NVE AQ+G+VYIDEVDK+T K+ S N RDVSGEGVQQ+LLK+LEGT+V+V PE
Sbjct: 317 VEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIPE 376
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR-AGVTD 496
KG R+ PRGDSIQMDTKDILFICGGAF+DLEKT+SER+ D+SIGFGA VR NM +G++
Sbjct: 377 KGLRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLSS 436
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
AAVTSSLLES++S DL+AYGLIPEFVGR PILVSL+AL EDQLV+VLTEPK+ALG+
Sbjct: 437 AAVTSSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGK 492
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 8/75 (10%)
Query: 70 DTFRKIRAEANCPRCSKHMDLLFSN-PSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYF 128
D + IR++ NCPRCS M ++FSN P +L+ P G YQAVN C CK+A+YF
Sbjct: 72 DDYDHIRSDVNCPRCSAQMHVIFSNRPLSLTAREP-------GIYQAVNFCSQCKTAFYF 124
Query: 129 RPHRIAPLQGSFVEI 143
RP +++PLQGSF+E+
Sbjct: 125 RPFKLSPLQGSFIEL 139
>gi|297792267|ref|XP_002864018.1| hypothetical protein ARALYDRAFT_495043 [Arabidopsis lyrata subsp.
lyrata]
gi|297309853|gb|EFH40277.1| hypothetical protein ARALYDRAFT_495043 [Arabidopsis lyrata subsp.
lyrata]
Length = 605
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/294 (76%), Positives = 256/294 (87%), Gaps = 2/294 (0%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD-NDD 319
LPTPKEIC+GLD+FVIGQEKAKKVLSVAVYNHYKRIYHA+ KKG + D N D
Sbjct: 196 LPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYHASRKKGFVSRSDNLDMEDENID 255
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSNVLL+GPTGSGKTLLAKTLAR VNVPF IADAT+LTQAGYVGEDVESILYKL
Sbjct: 256 HVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQAGYVGEDVESILYKLY 315
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A NVE AQ+G+VYIDEVDK+T K+ S N RDVSGEGVQQ+LLK+LEGT+V +PEKG
Sbjct: 316 VEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVPIPEKG 375
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR-AGVTDAA 498
R+ PRGDSIQMDTKDILFICGGAF+DLEKT+SER+ D+SIGFGA VR NM +G + AA
Sbjct: 376 LRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGFSSAA 435
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
VTSSLLES++S DL+AYGLIPEFVGR PILVSL+AL EDQLV+VLTEPK+ALG+
Sbjct: 436 VTSSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGK 489
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 15/90 (16%)
Query: 62 RYKWDHGG-------DTFRKIRAEANCPRCSKHMDLLFSN-PSNLSPPVPAPAVDGSGGY 113
R WD D + IR++ NCPRCS M ++FSN P +L+ P G Y
Sbjct: 56 RRIWDSCSGGGGRGGDDYDHIRSDVNCPRCSAQMHVIFSNRPLSLTAREP-------GIY 108
Query: 114 QAVNICPNCKSAYYFRPHRIAPLQGSFVEI 143
QAVN C CK+A+YFRP +++PLQGSF+E+
Sbjct: 109 QAVNFCSQCKTAFYFRPFKLSPLQGSFIEL 138
>gi|222619642|gb|EEE55774.1| hypothetical protein OsJ_04339 [Oryza sativa Japonica Group]
Length = 572
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/297 (75%), Positives = 256/297 (86%), Gaps = 11/297 (3%)
Query: 267 ICKGLDKFVIGQEKAKKVL---------SVAVYNHYKRIYHANLKKGSGAEPK-TAAAVD 316
+C+ LD+FVIGQ KAKKVL SVAVYNHYKRIY+A ++KG AA D
Sbjct: 1 MCRRLDEFVIGQGKAKKVLEGACQNWVLSVAVYNHYKRIYNATVQKGCSTNSGWLDAASD 60
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
+ +N+E++KSNVLLMGPTGSGKTLLAKTLAR VNVPF+IADAT+LTQAGYVGEDVESIL
Sbjct: 61 DQNNIEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFIIADATSLTQAGYVGEDVESILQ 120
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL AE+NV+AAQQG+VYIDEVDKITKKAES N+SRDVSGEGVQQALLK+LEGT+V++P
Sbjct: 121 KLLVAAEYNVQAAQQGIVYIDEVDKITKKAESANVSRDVSGEGVQQALLKILEGTVVSIP 180
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG-VT 495
EKG+RK+ R +SIQ+DTKDILFICGGAFVDLEKTISERRQDSSIGFGAP+R NMR+ VT
Sbjct: 181 EKGSRKNSRNESIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPIRINMRSSEVT 240
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
D VTSSLLESVES DL YGLIPEF+GR PILVSLTAL EDQLV+VLTEPKN+L +
Sbjct: 241 DPMVTSSLLESVESGDLARYGLIPEFIGRLPILVSLTALNEDQLVQVLTEPKNSLSR 297
>gi|226532215|ref|NP_001140773.1| uncharacterized protein LOC100272848 [Zea mays]
gi|194701024|gb|ACF84596.1| unknown [Zea mays]
Length = 346
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/223 (92%), Positives = 214/223 (95%), Gaps = 1/223 (0%)
Query: 331 MGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQ 390
MGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESILYKLL A+FNV+AAQ
Sbjct: 1 MGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQ 60
Query: 391 QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQ 450
QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD+IQ
Sbjct: 61 QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQ 120
Query: 451 MDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA-VTSSLLESVES 509
+DTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR G T +A VTSSLLESVES
Sbjct: 121 IDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRVGGTSSAQVTSSLLESVES 180
Query: 510 SDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
DLIAYGLIPEF+GRFPILVSLTAL EDQLV+VLTEPKNALG+
Sbjct: 181 GDLIAYGLIPEFIGRFPILVSLTALNEDQLVQVLTEPKNALGK 223
>gi|413922731|gb|AFW62663.1| hypothetical protein ZEAMMB73_067276 [Zea mays]
Length = 324
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/223 (91%), Positives = 213/223 (95%), Gaps = 1/223 (0%)
Query: 331 MGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQ 390
MGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESILYKLL A+FNV+AAQ
Sbjct: 1 MGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQ 60
Query: 391 QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQ 450
QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD+IQ
Sbjct: 61 QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQ 120
Query: 451 MDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-GVTDAAVTSSLLESVES 509
+DTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA G++ A VTSSLLESVES
Sbjct: 121 IDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGGISSAQVTSSLLESVES 180
Query: 510 SDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
DLIAYGLIPEF+GRFPILVSL AL EDQLV+VL EPKNALG+
Sbjct: 181 GDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLIEPKNALGK 223
>gi|413922727|gb|AFW62659.1| hypothetical protein ZEAMMB73_067276 [Zea mays]
gi|413922728|gb|AFW62660.1| hypothetical protein ZEAMMB73_067276 [Zea mays]
gi|413922729|gb|AFW62661.1| hypothetical protein ZEAMMB73_067276 [Zea mays]
gi|413922730|gb|AFW62662.1| hypothetical protein ZEAMMB73_067276 [Zea mays]
Length = 346
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/223 (91%), Positives = 213/223 (95%), Gaps = 1/223 (0%)
Query: 331 MGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQ 390
MGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESILYKLL A+FNV+AAQ
Sbjct: 1 MGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQ 60
Query: 391 QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQ 450
QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD+IQ
Sbjct: 61 QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQ 120
Query: 451 MDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-GVTDAAVTSSLLESVES 509
+DTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA G++ A VTSSLLESVES
Sbjct: 121 IDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGGISSAQVTSSLLESVES 180
Query: 510 SDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
DLIAYGLIPEF+GRFPILVSL AL EDQLV+VL EPKNALG+
Sbjct: 181 GDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLIEPKNALGK 223
>gi|357498615|ref|XP_003619596.1| ATP-dependent Clp protease ATP-binding subunit clpX [Medicago
truncatula]
gi|355494611|gb|AES75814.1| ATP-dependent Clp protease ATP-binding subunit clpX [Medicago
truncatula]
Length = 386
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/239 (87%), Positives = 233/239 (97%), Gaps = 1/239 (0%)
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
+D+D+NVELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESI
Sbjct: 14 LDDDENVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESI 73
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
LYKLLA A++NV AAQQG++YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN
Sbjct: 74 LYKLLAAADYNVAAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 133
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG- 493
VPEKGARK+PRGD+IQ+DTK+ILFICGGAF+DLEKTISERRQDSSIGFGAPVRAN+R+G
Sbjct: 134 VPEKGARKNPRGDNIQIDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRANIRSGR 193
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
+ D+AV SSLLESVESSDLIAYGLIPEF+GRFPILVSL+ALTE+QL++VLTEPK+ALG+
Sbjct: 194 IIDSAVASSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEEQLMQVLTEPKHALGK 252
>gi|238005674|gb|ACR33872.1| unknown [Zea mays]
Length = 362
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/233 (84%), Positives = 222/233 (95%), Gaps = 1/233 (0%)
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VELEKSN+L+MGPTGSGKTLLAKTLAR VNVPFVIADAT+LTQAGYVGEDVESILYKLLA
Sbjct: 2 VELEKSNILVMGPTGSGKTLLAKTLARFVNVPFVIADATSLTQAGYVGEDVESILYKLLA 61
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+F+V AAQQG+VYIDEVDKITKKAES+N+SRDVSGEGVQQALLKMLEGT+V+VPEKGA
Sbjct: 62 AADFDVAAAQQGIVYIDEVDKITKKAESINLSRDVSGEGVQQALLKMLEGTVVSVPEKGA 121
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-GVTDAAV 499
R+HPRGD+IQ+DTK+ILFICGGAFVDLEKTISERR DSSIGF A VR+NMR+ GV +A +
Sbjct: 122 RRHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFRAQVRSNMRSGGVINAEI 181
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
TSSLL+SVES DLIAYGLIPEFVGRFPILV L++L+EDQLV+VLTEPKNALG+
Sbjct: 182 TSSLLKSVESGDLIAYGLIPEFVGRFPILVGLSSLSEDQLVEVLTEPKNALGR 234
>gi|384250570|gb|EIE24049.1| ClpX, ATPase regulatory subunit [Coccomyxa subellipsoidea C-169]
Length = 570
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/369 (54%), Positives = 250/369 (67%), Gaps = 47/369 (12%)
Query: 215 APGVEAVRKMGPSNGGGSGGN---GGGGGSSGGGGGGGS-----------------RWGG 254
AP + AVR + G GGN G GG S G S +GG
Sbjct: 118 APEMRAVRTTRATGSGADGGNMPRGMGGADSAQKGHAASYQASQGHIGQQPLDAVPSFGG 177
Query: 255 SNLG-----------EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKK 303
S +PTP++I LDKF++GQE KK L+VAVYNHY R+ H ++
Sbjct: 178 STSSTAEGSYRLWDPSKVPTPRKIVAALDKFIVGQEATKKTLAVAVYNHYMRVAHEEQRR 237
Query: 304 GSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQ 363
E VELEKSNVLL+GPTG+GKTLLAKTLAR V VPF +ADATTLTQ
Sbjct: 238 KRAQE----------RQVELEKSNVLLLGPTGTGKTLLAKTLARLVEVPFAMADATTLTQ 287
Query: 364 AGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQA 423
AGYVG+DVESILYKLL +N++ AQ+G+V DKI KK+E+++I+RDVSGEGVQQA
Sbjct: 288 AGYVGDDVESILYKLLQSCSYNLQVAQRGIV-----DKIVKKSENISITRDVSGEGVQQA 342
Query: 424 LLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFG 483
LLKMLEGT++NVPEKG RK+PRGD +Q+DTKDILFICGGAF+ L++ ++ER SSIGFG
Sbjct: 343 LLKMLEGTVMNVPEKGGRKNPRGDFLQVDTKDILFICGGAFIGLDRQVAERTAMSSIGFG 402
Query: 484 APVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVL 543
PVRA ++ G V+S++L+ VE +DLI YGLIPEFVGRFPI+ SL ALTED+L++VL
Sbjct: 403 NPVRAKIQ-GFGQPKVSSNVLKQVEQTDLIQYGLIPEFVGRFPIISSLQALTEDELMEVL 461
Query: 544 TEPKNALGQ 552
T P+NAL +
Sbjct: 462 TRPRNALSR 470
>gi|145341067|ref|XP_001415637.1| mitochondrial ClpX chaperone [Ostreococcus lucimarinus CCE9901]
gi|144575860|gb|ABO93929.1| mitochondrial ClpX chaperone [Ostreococcus lucimarinus CCE9901]
Length = 524
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 187/335 (55%), Positives = 241/335 (71%), Gaps = 24/335 (7%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
GG + G GG R S +DLPTPKE+ + LD++++GQ AKKVLSVAVYNHYKR+
Sbjct: 88 GGTRAGANDGAGGERT--SYAVDDLPTPKEMVRVLDEYIVGQAHAKKVLSVAVYNHYKRV 145
Query: 297 YHANLKKGSGAEPKTAAAVDNDD---------------NVELEKSNVLLMGPTGSGKTLL 341
++ A A +D +D +V LEKSN+LL GPTGSGKTLL
Sbjct: 146 GAEGERRAREASAAFAQRLDEEDGAFEDENVVDENSLDDVTLEKSNILLCGPTGSGKTLL 205
Query: 342 AKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDK 401
AKTLA+ NVPF IAD+TTLTQAGYVGEDVESIL+KLL A ++V+AAQ+G+VYIDE+DK
Sbjct: 206 AKTLAKFANVPFAIADSTTLTQAGYVGEDVESILHKLLQNANYDVQAAQRGIVYIDEIDK 265
Query: 402 ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICG 461
+++K+++++I+RDVSGEGVQQALLKM+EGT VNVPEKG RK+P +Q+DT +ILFICG
Sbjct: 266 LSRKSDNVSITRDVSGEGVQQALLKMVEGTTVNVPEKGGRKNPNSQFVQLDTTNILFICG 325
Query: 462 GAFVDLEKTISERRQDSSIGFGAPVRA----NMRAGVTDAAVTSSLLESVESSDLIAYGL 517
GAF LE I +R SSIGFG PV A N + V AA L+ VE+ D+++YGL
Sbjct: 326 GAFTGLESVIQQRLSKSSIGFGKPVIARDEPNSKQAVEAAA---KALQEVETGDIVSYGL 382
Query: 518 IPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
IPEFVGRFP+ V L+AL E +LV +LT+P++A+G+
Sbjct: 383 IPEFVGRFPVCVPLSALGEKELVDILTKPRDAVGK 417
>gi|357128686|ref|XP_003566001.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Brachypodium distachyon]
Length = 485
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 188/298 (63%), Positives = 223/298 (74%), Gaps = 9/298 (3%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN--- 317
PTPKEI +GLD+FV+GQ+KAKKVL VAV+NHYKRIY+ + S T+AA N
Sbjct: 34 FPTPKEIRRGLDQFVVGQDKAKKVLCVAVHNHYKRIYN---EPSSNNSAVTSAADCNVST 90
Query: 318 --DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESIL 375
DD++ELEKSN+LL+GPTGSGKTLLAKTLAR NVPFVIADAT +TQAGY GEDVESIL
Sbjct: 91 SGDDDIELEKSNILLIGPTGSGKTLLAKTLARFANVPFVIADATAITQAGYSGEDVESIL 150
Query: 376 YKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV 435
YKLLA A+ NVEAA++G++YIDEVDK+TKK RD+SGEGVQQALLKM EGT++NV
Sbjct: 151 YKLLAAADCNVEAAERGIIYIDEVDKLTKKVGCQEDWRDISGEGVQQALLKMFEGTVINV 210
Query: 436 PEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP-VRANMRAGV 494
P K + +++DTK+ILFICGGAF DL K ISER GFG P R
Sbjct: 211 PRKRNQHSVSHGYVEVDTKNILFICGGAFSDLGKIISERHHRCPFGFGTPKCRELQDYAS 270
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
T+A SSLLE +E+ DLIAYGL PEF+GR PI V L LTEDQL++VL EPKNA+G+
Sbjct: 271 TNALEESSLLEVIENDDLIAYGLTPEFIGRLPITVGLAHLTEDQLIQVLREPKNAIGK 328
>gi|308799613|ref|XP_003074587.1| CLP protease regulatory subunit CLPX (ISS) [Ostreococcus tauri]
gi|116000758|emb|CAL50438.1| CLP protease regulatory subunit CLPX (ISS) [Ostreococcus tauri]
Length = 506
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 178/325 (54%), Positives = 238/325 (73%), Gaps = 11/325 (3%)
Query: 239 GGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH 298
GGS G GG + S ++LPTP+++ + LD++++GQ AKKVLSVAVYNHYKR+
Sbjct: 77 GGSRTAGMGGATGRLNSYAIDELPTPRQMVRVLDEYIVGQAHAKKVLSVAVYNHYKRVGA 136
Query: 299 ANLKKGSGAEPKTAAA--VDND--------DNVELEKSNVLLMGPTGSGKTLLAKTLARH 348
+ ++ A +A ++ND D+V LEKSN++L GPTGSGKTLLAKTLA+
Sbjct: 137 ESEQRAREAADLSAVERELENDRTESANSFDDVTLEKSNIILCGPTGSGKTLLAKTLAKF 196
Query: 349 VNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAES 408
NVPF IAD+TTLTQAGYVGEDVESIL+KLL A F+V AAQ+G+VYIDE+DK+ +K+++
Sbjct: 197 ANVPFAIADSTTLTQAGYVGEDVESILHKLLQNANFDVNAAQRGIVYIDEIDKLARKSDT 256
Query: 409 LNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLE 468
++++RDVSGEGVQQALLKM+EGT+VNVPEKG RK+P + +DT +ILFICGGAF LE
Sbjct: 257 VSVTRDVSGEGVQQALLKMVEGTVVNVPEKGGRKNPNSQFVPLDTANILFICGGAFTGLE 316
Query: 469 KTISERRQDSSIGFGAPVRANMRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPI 527
I +R+ SSIGFG PV A + ++ VE+ D+++YGLIPEFVGRFP+
Sbjct: 317 NVIQQRQSKSSIGFGKPVSARDEPNSKEAIEAAAKAMQEVETGDIVSYGLIPEFVGRFPV 376
Query: 528 LVSLTALTEDQLVKVLTEPKNALGQ 552
V L AL E +LV +LT+P++A+G+
Sbjct: 377 CVPLQALGEKELVDILTKPRDAIGK 401
>gi|218197157|gb|EEC79584.1| hypothetical protein OsI_20758 [Oryza sativa Indica Group]
Length = 495
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 179/297 (60%), Positives = 224/297 (75%), Gaps = 9/297 (3%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD---- 316
PTPKEI +GLD+FV+GQ+KAKKVL VAV+NHYKRIY + S K++A D
Sbjct: 46 FPTPKEIRRGLDEFVVGQDKAKKVLCVAVHNHYKRIY----SESSNCSMKSSACGDVSMS 101
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
DD++ELEKSN+LL+GPTGSGKTLLAKTLAR +VPFVIADAT +TQAGY GEDVESI+
Sbjct: 102 GDDDIELEKSNILLIGPTGSGKTLLAKTLARFADVPFVIADATAITQAGYSGEDVESIIC 161
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
LLA A+FNVEA ++G+VYIDEVDK+ KK E RDVSGEGVQ ALLK+ EGT++NVP
Sbjct: 162 NLLAAAKFNVEATERGIVYIDEVDKLIKKVECNEDRRDVSGEGVQHALLKIFEGTVINVP 221
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR-AGVT 495
K + ++++TK+ILFICGG+F LEK +SER ++ +GFG P ++R G T
Sbjct: 222 RKRNQDSISDGYVEVNTKNILFICGGSFSGLEKIVSERHRNCHMGFGLPTSGDLRNCGWT 281
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
+A S +E++ES DLIAYGLIPEF+GR PI V L L+E QLV+VL EPKNA+G+
Sbjct: 282 NAIGESCCVEAIESDDLIAYGLIPEFIGRLPITVGLNDLSEAQLVQVLMEPKNAIGK 338
>gi|326504532|dbj|BAJ91098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 179/292 (61%), Positives = 219/292 (75%), Gaps = 8/292 (2%)
Query: 265 KEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIY-HANLKKGSGAEPKTAAAVDNDDNVEL 323
KEI +GLD++V+GQ+KAKKVL VAV+NHYKRIY + K S A A +D+ EL
Sbjct: 47 KEIRRGLDQYVVGQDKAKKVLCVAVHNHYKRIYSEPSNKSSSQASAGRDAGTAAEDDTEL 106
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
EKSN+LL+GPTGSGKTLLAKTLAR NVPFVIADAT +TQAGY GEDVESI+YKLL A+
Sbjct: 107 EKSNILLLGPTGSGKTLLAKTLARFANVPFVIADATAVTQAGYSGEDVESIVYKLLVAAD 166
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKH 443
FNVEAA++G++YIDEVDK+ KK RDVSGEGVQQALLKM EGT+++VP K ++
Sbjct: 167 FNVEAAERGIIYIDEVDKLAKKVGCQEDRRDVSGEGVQQALLKMFEGTVISVPRKRSQNG 226
Query: 444 PRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT--- 500
+++DT +ILFICGGAF DL K ISER GFG P+R +R D A+
Sbjct: 227 LSHGCVEVDTTNILFICGGAFSDLGKIISERLHHCPFGFGTPIRHELR----DYALMNEQ 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
SSL E +E+ DLIAYGL PEF+GR PI+V LT LTEDQL++V+ EPKNA+G+
Sbjct: 283 SSLFEEIENDDLIAYGLTPEFIGRLPIIVGLTHLTEDQLIQVIREPKNAIGK 334
>gi|350552165|ref|ZP_08921371.1| ATP-dependent Clp protease ATP-binding subunit clpX [Thiorhodospira
sibirica ATCC 700588]
gi|349795030|gb|EGZ48836.1| ATP-dependent Clp protease ATP-binding subunit clpX [Thiorhodospira
sibirica ATCC 700588]
Length = 427
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 177/293 (60%), Positives = 226/293 (77%), Gaps = 19/293 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G LP P EI K LD++VIGQE+AKKVLSVAVYNHYKR+ A AV
Sbjct: 61 GSHLPKPHEIKKILDEYVIGQERAKKVLSVAVYNHYKRL--------------EAGAVHA 106
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 KDDVELAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 166
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP
Sbjct: 167 LLQKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPP 226
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP+ + +Q+DT +ILFICGGAF LEK I +R + S IGF A V++ R+ ++DA
Sbjct: 227 QGGRKHPQQEFLQVDTHNILFICGGAFAGLEKVIRDRTEKSGIGFSAEVKSK-RSSLSDA 285
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A LL +E+ DL+ YGLIPEFVGR P+L +L L E LV++LTEP+NAL
Sbjct: 286 A----LLNHIEAEDLVKYGLIPEFVGRLPVLANLEELDEAALVQILTEPRNAL 334
>gi|334129246|ref|ZP_08503051.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Methyloversatilis universalis FAM5]
gi|333445472|gb|EGK73413.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Methyloversatilis universalis FAM5]
Length = 421
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 220/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+PKEIC+ LD++VIGQ AK++L+VAVYNHYKR+ H + K D
Sbjct: 63 DLPSPKEICEILDQYVIGQSPAKRILAVAVYNHYKRLRHMSRK----------------D 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 EVELSKSNILLVGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ ++ VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 QKCDYEVERAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILF+CGGAF LEK I R + SIGFGA V++ D+
Sbjct: 227 GRKHPNQDFVQVDTTNILFVCGGAFDGLEKVIRNRTEHVSIGFGAEVKSR------DSRS 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L+ VE DLI +GLIPEFVGR P++ +L L ED L+++L EPKNAL
Sbjct: 281 AGEALQDVEPEDLIKFGLIPEFVGRLPVVATLQELDEDALIQILIEPKNAL 331
>gi|372488838|ref|YP_005028403.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Dechlorosoma
suillum PS]
gi|359355391|gb|AEV26562.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Dechlorosoma
suillum PS]
Length = 424
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 174/290 (60%), Positives = 219/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEIC LD++VIGQE AKK+LSVAVYNHYKR+ H +G A D+
Sbjct: 65 LPTPKEICSILDQYVIGQEVAKKILSVAVYNHYKRLRH----QGKSA-----------DD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ ++ VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYEVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D +Q+DT +ILFICGGAF LEK I R IGFGA V++ D
Sbjct: 230 RKHPNQDFVQVDTANILFICGGAFDGLEKVIRNRSTRGGIGFGAEVKSK-----EDKKAV 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +VE DLI +GLIPEFVGR P++ +L L+E LV++L EPKNAL
Sbjct: 285 GEVLRTVEPEDLIKFGLIPEFVGRLPVIATLDELSEAALVEILIEPKNAL 334
>gi|225848211|ref|YP_002728374.1| ATP-dependent protease ATP-binding subunit ClpX
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225643885|gb|ACN98935.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 405
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 179/291 (61%), Positives = 220/291 (75%), Gaps = 23/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD++VIGQEKAKK+LSVAVYNHYKRIY +L K +G
Sbjct: 53 LPTPAEIKAKLDEYVIGQEKAKKILSVAVYNHYKRIYQKDLFKNTG-------------- 98
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+EKSN+LL+GPTGSGKTLLA+TLAR +NVPF IADAT +T+AGYVGEDVESIL +LL
Sbjct: 99 VEVEKSNILLIGPTGSGKTLLARTLARILNVPFAIADATNITEAGYVGEDVESILARLLQ 158
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKA-ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VEAA++G+VYIDEVDKI KK+ ++ +I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 159 NADYDVEAAEKGIVYIDEVDKIAKKSGDNPSITRDVSGEGVQQALLKILEGTIANVPPQG 218
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFI GGAFV LE I +R +IGFGA +++ G
Sbjct: 219 GRKHPHQEFIQIDTTNILFILGGAFVGLEDIIRQRLGKKAIGFGAEIKSKKEEG------ 272
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LLE V+ DLI +GLIPEF+GR P++ +L L ED LV+VLTEPKNAL
Sbjct: 273 --DLLEQVQPEDLIKFGLIPEFLGRIPVIATLKELDEDMLVRVLTEPKNAL 321
>gi|386828605|ref|ZP_10115712.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Beggiatoa
alba B18LD]
gi|386429489|gb|EIJ43317.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Beggiatoa
alba B18LD]
Length = 427
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 172/300 (57%), Positives = 222/300 (74%), Gaps = 20/300 (6%)
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
+N LPTP EI + LD++VIGQE AKKVLSVAVYNHYKR+
Sbjct: 59 ADANARRKLPTPHEIHQHLDEYVIGQEHAKKVLSVAVYNHYKRV---------------E 103
Query: 313 AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVE 372
++ + VE+ KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE
Sbjct: 104 TQLNKKNEVEIAKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVE 163
Query: 373 SILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI 432
+I+ KLL + +++VE AQ G++YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI
Sbjct: 164 NIIQKLLQKCDYDVEKAQTGIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTI 223
Query: 433 VNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA 492
+VP +G RKHP+ + +Q+DT ++LFICGGAF LEK I R + S IGF A VR+N
Sbjct: 224 ASVPPQGGRKHPQQEFLQVDTTNMLFICGGAFAGLEKVIRARSEKSGIGFSAEVRSN--- 280
Query: 493 GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
D + LL VE DLI YGLIPEF+GR PI+ +L LTE+QLVK+L EPKNAL +
Sbjct: 281 --DDKRNITELLHGVEPEDLIKYGLIPEFIGRLPIITTLEELTEEQLVKILVEPKNALTK 338
>gi|121593622|ref|YP_985518.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax sp.
JS42]
gi|222110342|ref|YP_002552606.1| ATP-dependent protease ATP-binding subunit clpx [Acidovorax ebreus
TPSY]
gi|166214752|sp|A1W5B7.1|CLPX_ACISJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763845|sp|B9MG15.1|CLPX_ACIET RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120605702|gb|ABM41442.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidovorax
sp. JS42]
gi|221729786|gb|ACM32606.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidovorax
ebreus TPSY]
Length = 421
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 171/291 (58%), Positives = 220/291 (75%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQEKAK+ L+VAVYNHYKR+ H + K G D
Sbjct: 64 DLPTPAEIKTNLDHYVIGQEKAKRTLAVAVYNHYKRLRHKD-KAGK-------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 EVELSKSNILLIGPTGSGKTLLAQTLARQLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA VR+ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVRSKKQRSLTE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + +E DLI +GLIPE VGR P++ +L L+ED LV++LTEPKNAL
Sbjct: 287 ---VFQDIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTEPKNAL 334
>gi|239815494|ref|YP_002944404.1| ATP-dependent protease ATP-binding subunit ClpX [Variovorax
paradoxus S110]
gi|259491272|sp|C5CJT5.1|CLPX_VARPS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|239802071|gb|ACS19138.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Variovorax
paradoxus S110]
Length = 421
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 171/291 (58%), Positives = 218/291 (74%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE AK++LSVAVYNHYKR+ H KG D
Sbjct: 64 DLPTPLEIKTNLDNYVIGQEPAKRMLSVAVYNHYKRLRHKEKAKG--------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGASVKSKAQRSITE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DLI +GLIPE VGR P++ SL L+ED LV++LTEPKNA+
Sbjct: 287 ---VFREVEPEDLIKFGLIPELVGRMPVVASLAELSEDALVQILTEPKNAV 334
>gi|319794077|ref|YP_004155717.1| ATP-dependent clp protease, ATP-binding subunit clpx [Variovorax
paradoxus EPS]
gi|315596540|gb|ADU37606.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Variovorax
paradoxus EPS]
Length = 421
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 171/291 (58%), Positives = 218/291 (74%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE AK++LSVAVYNHYKR+ H KG D
Sbjct: 64 DLPTPLEIKTNLDNYVIGQEPAKRMLSVAVYNHYKRLRHKEKAKG--------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGATVKSKAQRSITE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DLI +GLIPE VGR P++ SL L+ED LV++LTEPKNA+
Sbjct: 287 ---VFREVEPEDLIKFGLIPELVGRMPVVASLAELSEDALVQILTEPKNAV 334
>gi|398808176|ref|ZP_10567044.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Variovorax
sp. CF313]
gi|398088222|gb|EJL78789.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Variovorax
sp. CF313]
Length = 421
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 171/291 (58%), Positives = 218/291 (74%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE AK++LSVAVYNHYKR+ H KG D
Sbjct: 64 DLPTPLEIKTNLDNYVIGQEPAKRMLSVAVYNHYKRLRHKEKAKG--------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVKSKAQRSITE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DLI +GLIPE VGR P++ SL L+ED LV++LTEPKNA+
Sbjct: 287 ---VFREVEPEDLIKFGLIPELVGRMPVVASLAELSEDALVQILTEPKNAV 334
>gi|126659495|ref|ZP_01730628.1| ATP-dependent protease ATP-binding subunit [Cyanothece sp. CCY0110]
gi|126619229|gb|EAZ89965.1| ATP-dependent protease ATP-binding subunit [Cyanothece sp. CCY0110]
Length = 391
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/297 (58%), Positives = 225/297 (75%), Gaps = 19/297 (6%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
G++L E LP P EI LD++VIGQ++AKKVLSVAVYNHYKR+ NL +G
Sbjct: 23 GTSLKE-LPKPMEIKDYLDEYVIGQDEAKKVLSVAVYNHYKRL---NLVQGK-------- 70
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
++DDN+EL+KSN+LLMGPTGSGKTLLA+TLA+ + VPF +ADATTLT+AGYVGEDVE+
Sbjct: 71 --NDDDNIELQKSNILLMGPTGSGKTLLAQTLAQVLEVPFAVADATTLTEAGYVGEDVEN 128
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
IL +LL A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+
Sbjct: 129 ILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVA 188
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 493
NVP +G RKHP D IQ+DT +ILFICGGAFV LE+ I +R S+GF P G
Sbjct: 189 NVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLERVIEQRIGKKSMGFVRP-----GEG 243
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ T+ L++ VE DL+ +G+IPEFVGR P++ +L LTE+ LV +LT P+NAL
Sbjct: 244 QSKEKRTADLMQRVEPDDLVKFGMIPEFVGRIPVMAALNPLTEETLVAILTRPRNAL 300
>gi|83949689|ref|ZP_00958422.1| ATP-dependent protease ATP-binding subunit [Roseovarius nubinhibens
ISM]
gi|83837588|gb|EAP76884.1| ATP-dependent protease ATP-binding subunit [Roseovarius nubinhibens
ISM]
Length = 421
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/301 (57%), Positives = 226/301 (75%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+R G GE +PTP+EIC LD +VIGQ AK+VLSVAV+NHYKR+ H+ K G
Sbjct: 52 TRSAGLKSGEGVPTPREICDVLDDYVIGQAMAKRVLSVAVHNHYKRLNHSG-KSG----- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL+KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELQKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VR N
Sbjct: 216 GTVAAVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDN 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + + +E DL+ +GLIPEFVGR P++ +L L ED L+ +LTEPKNA
Sbjct: 276 DDRGV------GEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALITILTEPKNA 329
Query: 550 L 550
L
Sbjct: 330 L 330
>gi|260432981|ref|ZP_05786952.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416809|gb|EEX10068.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Silicibacter
lacuscaerulensis ITI-1157]
Length = 422
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 171/290 (58%), Positives = 224/290 (77%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPK+IC+ LD +VIGQ +AK+VLSVAV+NHYKR+ HA K GS +
Sbjct: 63 VPTPKDICEVLDDYVIGQARAKRVLSVAVHNHYKRLNHAQ-KAGS--------------D 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VR N GV
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDNDERGV------ 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNAL
Sbjct: 282 GEIFQDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTKPKNAL 331
>gi|225023958|ref|ZP_03713150.1| hypothetical protein EIKCOROL_00825 [Eikenella corrodens ATCC
23834]
gi|224942983|gb|EEG24192.1| hypothetical protein EIKCOROL_00825 [Eikenella corrodens ATCC
23834]
Length = 418
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 178/303 (58%), Positives = 224/303 (73%), Gaps = 22/303 (7%)
Query: 249 GSRWGGSNLGED-LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGA 307
G+ G ++ GED LPTP EI L++ VIGQE+AKKVL+VAVYNHYKR+ +
Sbjct: 45 GAAAGETHSGEDRLPTPAEIVSNLNQHVIGQEQAKKVLAVAVYNHYKRLRY--------- 95
Query: 308 EPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYV 367
PK DNVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYV
Sbjct: 96 -PKEG------DNVELAKSNILLIGPTGSGKTLLAQSLARRLDVPFVMADATTLTEAGYV 148
Query: 368 GEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 427
GEDVE I+ KLL +FNVE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK+
Sbjct: 149 GEDVEQIITKLLGNCDFNVEKAQNGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKL 208
Query: 428 LEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR 487
+EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF LEK I +R + IGFGA V
Sbjct: 209 IEGTVASVPPQGGRKHPNQDFIQVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVH 268
Query: 488 ANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPK 547
+ DA VT L E VE DLI +GLIPE +GR P++ +L L E+ L+ +LTEPK
Sbjct: 269 SKDE----DADVT-ELFEIVEPEDLIKFGLIPELIGRLPVIATLAELDEEALISILTEPK 323
Query: 548 NAL 550
NAL
Sbjct: 324 NAL 326
>gi|319763663|ref|YP_004127600.1| ATP-dependent clp protease, ATP-binding subunit clpx
[Alicycliphilus denitrificans BC]
gi|330824072|ref|YP_004387375.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Alicycliphilus
denitrificans K601]
gi|317118224|gb|ADV00713.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Alicycliphilus denitrificans BC]
gi|329309444|gb|AEB83859.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Alicycliphilus denitrificans K601]
Length = 421
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 220/291 (75%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQEKAK+ L+VAVYNHYKR+ H + K G D
Sbjct: 64 DLPTPAEIKANLDSYVIGQEKAKRTLAVAVYNHYKRLRHKD-KAGK-------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARQLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVKSKKQRSLTE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + +E DLI +GLIPE VGR P++ +L L ED LV++LTEPKNAL
Sbjct: 287 ---VFQDIEPEDLIKFGLIPELVGRMPVVTALAELGEDALVQILTEPKNAL 334
>gi|301631595|ref|XP_002944883.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like
[Xenopus (Silurana) tropicalis]
Length = 421
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 219/293 (74%), Gaps = 20/293 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQEKAK+ L+VAVYNHYKR+ + + + D
Sbjct: 64 DLPTPAEIKANLDNYVIGQEKAKRTLAVAVYNHYKRLRYKDKA--------------DKD 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 EVELSKSNILLIGPTGSGKTLLAQTLARQLDVPFVMADATTLTEAGYVGEDVENIISKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G++YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYDVEKAQRGIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT ++LFICGGAF LEK I R + S IGFGA VR+ + +
Sbjct: 230 GRKHPNQDFLQIDTTNVLFICGGAFAGLEKVIENRTEASGIGFGAAVRSKQQRSI----- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
S + + +E DLI +G+IPE VGR P++ SL L+ED LV++LTEPKNAL +
Sbjct: 285 -SEVFQDIEPEDLIKFGIIPELVGRMPVVTSLAELSEDALVQILTEPKNALAK 336
>gi|187931472|ref|YP_001891456.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. mediasiatica FSC147]
gi|187712381|gb|ACD30678.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
tularensis subsp. mediasiatica FSC147]
Length = 417
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 180/324 (55%), Positives = 222/324 (68%), Gaps = 25/324 (7%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG NG R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRNGNICNECVSKCAEKIRSTGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL+KSNVLL+GPTGSGKTL A+TLA
Sbjct: 82 VAVYNHYKRI-TSNLTK--------------DDDTELKKSNVLLIGPTGSGKTLFAQTLA 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT DILFICGGAF
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAG 246
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK I R SIGF A V + +D L++ +ES DL +GLIPE +GR P
Sbjct: 247 IEKVIKHRMDKVSIGFNADVTQQKNSLDSD-----KLMQKIESEDLTRFGLIPELIGRLP 301
Query: 527 ILVSLTALTEDQLVKVLTEPKNAL 550
I+ L L E+ LV++LTEPKNAL
Sbjct: 302 IVTVLNELKEEDLVRILTEPKNAL 325
>gi|337279217|ref|YP_004618689.1| ATP-dependent Clp protease ATP-binding subunit [Ramlibacter
tataouinensis TTB310]
gi|334730294|gb|AEG92670.1| candidate ATP-dependent Clp protease ATP-binding subunit
[Ramlibacter tataouinensis TTB310]
Length = 421
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 218/291 (74%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE AK+ LSVAVYNHYKR+ H + K D
Sbjct: 64 DLPTPGEIKSNLDNYVIGQETAKRALSVAVYNHYKRLRHKDKAK--------------KD 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I +R + S IGFGA V++ + +TD
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIEQRTEASGIGFGAAVKSKKQRSLTD--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DLI +GLIPE VGR P++ +L L+E+ LV++LTEPKNAL
Sbjct: 287 ---VFREVEPEDLIKFGLIPELVGRMPVVATLAELSEEALVQILTEPKNAL 334
>gi|218440072|ref|YP_002378401.1| ATP-dependent protease ATP-binding subunit ClpX [Cyanothece sp. PCC
7424]
gi|226706581|sp|B7KBH7.1|CLPX_CYAP7 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|218172800|gb|ACK71533.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. PCC 7424]
Length = 447
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 172/296 (58%), Positives = 225/296 (76%), Gaps = 16/296 (5%)
Query: 256 NLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKK-GSGAEPKTAAA 314
+LG+ +P P+EI K LD++VIGQ +AKKVLSVAVYNHYKR+ K+ G+GA
Sbjct: 76 SLGQ-IPKPREIKKYLDEYVIGQNEAKKVLSVAVYNHYKRLSDIQAKRTGTGA------- 127
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
DD VEL+KSN+LLMGPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I
Sbjct: 128 --TDDPVELQKSNILLMGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENI 185
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
L +LL A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ N
Sbjct: 186 LLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVAN 245
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP D IQ+DT +ILFICGGAFV L+K + +R S+GF P G
Sbjct: 246 VPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLDKIVEQRLGKKSMGFIRPAE-----GT 300
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ ++ LL+ +E DL+ +G+IPEFVGR P++ SL L ED L+ +LT+P+NAL
Sbjct: 301 SKEKWSADLLKQLEPDDLVKFGMIPEFVGRIPVMASLDPLDEDALIAILTQPRNAL 356
>gi|264677388|ref|YP_003277294.1| ATP-dependent Clp protease ATP-binding subunit [Comamonas
testosteroni CNB-2]
gi|262207900|gb|ACY31998.1| ATP-dependent Clp protease, ATP-binding subunit [Comamonas
testosteroni CNB-2]
Length = 420
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 219/291 (75%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE+AK+ L+VAVYNHYKR+ H + K G D
Sbjct: 63 DLPTPAEIKANLDNYVIGQEQAKRTLAVAVYNHYKRLNHKD-KAGK-------------D 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARQLNVPFVMADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
E++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ ++P +G
Sbjct: 169 QSCEYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASIPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFIC GAF LEK I R + S IGFGA V++ + +
Sbjct: 229 GRKHPNQDFLQIDTTNILFICSGAFAGLEKVIENRTEASGIGFGATVKSKKQRSI----- 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S + +E DLI +G+IPE VGR P++ +L L+ED LV++LTEPKNAL
Sbjct: 284 -SEMFLEIEPEDLIKFGIIPELVGRMPVVTALAELSEDALVQILTEPKNAL 333
>gi|254463915|ref|ZP_05077326.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacterales bacterium Y4I]
gi|206684823|gb|EDZ45305.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacterales bacterium Y4I]
Length = 422
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/301 (57%), Positives = 226/301 (75%), Gaps = 21/301 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA K GS
Sbjct: 52 TKASGLKATDGVPTPKDICQVLDDYVIGQATAKRVLSVAVHNHYKRLNHAQ-KAGS---- 106
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 107 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K IS R + S++GFGA VR N
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGKGSAMGFGADVRDN 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + + +E DL+ +GLIPEFVGR P+L +L L E+ LV +LTEPKNA
Sbjct: 277 DERGV------GEVFKDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALVTILTEPKNA 330
Query: 550 L 550
L
Sbjct: 331 L 331
>gi|332529293|ref|ZP_08405255.1| ATP-dependent protease ATP-binding subunit ClpX [Hylemonella
gracilis ATCC 19624]
gi|332041210|gb|EGI77574.1| ATP-dependent protease ATP-binding subunit ClpX [Hylemonella
gracilis ATCC 19624]
Length = 421
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 169/290 (58%), Positives = 215/290 (74%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQ+ AK+ L+VAVYNHYKR+ H + D
Sbjct: 65 LPTPAEIKANLDNYVIGQDAAKRTLAVAVYNHYKRLQHKETAR--------------KDE 110
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 VELAKSNILLIGPTGSGKTLLAQTLARQLNVPFVMADATTLTEAGYVGEDVENIIAKLLQ 170
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 NCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQGG 230
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT +ILFICGGAF LEK I R + S IGFGA V++ + +T+
Sbjct: 231 RKHPNQDFIQVDTTNILFICGGAFAGLEKVIERRTESSGIGFGAAVKSKTQRSLTE---- 286
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + VE DLI YGLIPE VGR P++ +L L+ED LV++LTEPKNAL
Sbjct: 287 --VFKEVEPEDLIKYGLIPELVGRMPVVATLAELSEDALVQILTEPKNAL 334
>gi|171059224|ref|YP_001791573.1| ATP-dependent protease ATP-binding subunit ClpX [Leptothrix
cholodnii SP-6]
gi|238689116|sp|B1Y6H2.1|CLPX_LEPCP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|170776669|gb|ACB34808.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Leptothrix
cholodnii SP-6]
Length = 424
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/298 (58%), Positives = 218/298 (73%), Gaps = 19/298 (6%)
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
GG DLP P EI LD++VIGQ+ AK+ LSVAVYNHYKR+ H KG G E
Sbjct: 58 GGKTSRSDLPVPSEIKTLLDQYVIGQDAAKRTLSVAVYNHYKRLKHMA-DKGKGEE---- 112
Query: 313 AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVE 372
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE
Sbjct: 113 --------VELAKSNILLIGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVE 164
Query: 373 SILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI 432
+I+ KLL + VE AQ+G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 165 NIIQKLLQNCNYEVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLVEGTM 224
Query: 433 VNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA 492
+VP +G RKHP D +Q+DT +ILFICGGAF LEK I+ R + S IGFGA V++
Sbjct: 225 ASVPPQGGRKHPNQDFLQIDTTNILFICGGAFDGLEKVIANRSEKSGIGFGATVKSKAER 284
Query: 493 GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
V S + +E DLI +G+IPE VGR P++ +L LTED LV++LTEPKNAL
Sbjct: 285 SV------SEVFRQIEPEDLIKFGIIPELVGRLPVIATLGELTEDALVQILTEPKNAL 336
>gi|56695905|ref|YP_166256.1| ATP-dependent protease ATP-binding subunit ClpX [Ruegeria pomeroyi
DSS-3]
gi|81350417|sp|Q5LUP9.1|CLPX_SILPO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|56677642|gb|AAV94308.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ruegeria
pomeroyi DSS-3]
Length = 424
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 171/290 (58%), Positives = 222/290 (76%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++IC LD +VIGQ AK+VLSVAV+NHYKR+ HA K GS +
Sbjct: 65 VPTPRDICDVLDDYVIGQSTAKRVLSVAVHNHYKRLNHAQ-KAGS--------------D 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VRA+ GV
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRASDERGV------ 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNAL
Sbjct: 284 GELFTELEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTKPKNAL 333
>gi|315924139|ref|ZP_07920365.1| ATP-dependent Clp protease ATP-binding subunit [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315622541|gb|EFV02496.1| ATP-dependent Clp protease ATP-binding subunit [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 431
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/294 (56%), Positives = 224/294 (76%), Gaps = 21/294 (7%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
L ++PTPKEI LD +VIGQ++AKK LSVAVYNHYKRI AA
Sbjct: 58 LYTEVPTPKEIKAALDTYVIGQDEAKKALSVAVYNHYKRI---------------NAAET 102
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
+DD+VE++KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+IL
Sbjct: 103 DDDDVEIQKSNILLIGPTGSGKTLLAQTLARILDVPFAIADATTLTEAGYVGEDVENILL 162
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL A+ ++E A++G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP
Sbjct: 163 KLLQAADMDIERAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKILEGTVANVP 222
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHP+ + IQ+DTKDILFICGGAF +E+ I++R + SIGF A +R+ +
Sbjct: 223 PQGGRKHPQQEFIQLDTKDILFICGGAFDGIEEVIAKRLEKGSIGFDATIRSRVEKE--- 279
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+++E + D++ YGLIPEF+GR P++ +L L E+ L+ +LTEPKNAL
Sbjct: 280 ---DDAMMEKIVPHDILKYGLIPEFIGRIPVIATLKHLDEEALINILTEPKNAL 330
>gi|121605847|ref|YP_983176.1| ATP-dependent protease ATP-binding subunit ClpX [Polaromonas
naphthalenivorans CJ2]
gi|166214799|sp|A1VRH7.1|CLPX_POLNA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120594816|gb|ABM38255.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Polaromonas
naphthalenivorans CJ2]
Length = 421
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/300 (58%), Positives = 220/300 (73%), Gaps = 23/300 (7%)
Query: 254 GSNLGE---DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPK 310
GS GE DLPTP EI LD +VIGQE AK+ L+VAVYNHYKR+ H K
Sbjct: 55 GSEAGEARSDLPTPAEIKATLDGYVIGQEPAKRTLAVAVYNHYKRLRHKESAK------- 107
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGED
Sbjct: 108 -------KDDVELTKSNILLIGPTGSGKTLLAQTLARTLNVPFVMADATTLTEAGYVGED 160
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VE+I+ KLL + V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EG
Sbjct: 161 VENIIQKLLQSCNYEVDRAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLMEG 220
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++
Sbjct: 221 TMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFSGLEKVIENRTEASGIGFGAAVKSKK 280
Query: 491 RAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+T+A + VE DLI +GLIPE VGR P++ +L L+ED LV++LTEPKNA+
Sbjct: 281 ARSLTEA------FKDVEPEDLIKFGLIPELVGRMPVIATLAELSEDALVQILTEPKNAV 334
>gi|346995187|ref|ZP_08863259.1| ATP-dependent protease ATP-binding subunit ClpX [Ruegeria sp. TW15]
Length = 421
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/301 (57%), Positives = 226/301 (75%), Gaps = 21/301 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA K GS
Sbjct: 52 TKASGLKSSDGVPTPKDICEVLDDYVIGQATAKRVLSVAVHNHYKRLNHAQ-KAGS---- 106
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 107 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VR N
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDN 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT PKNA
Sbjct: 277 DERGV------GEIFKDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTSPKNA 330
Query: 550 L 550
L
Sbjct: 331 L 331
>gi|254462093|ref|ZP_05075509.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacterales bacterium HTCC2083]
gi|206678682|gb|EDZ43169.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacteraceae bacterium HTCC2083]
Length = 377
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/301 (56%), Positives = 222/301 (73%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +PTPK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA
Sbjct: 8 TKTAGLKNSEGVPTPKDICQVLDDYVIGQATAKRVLSVAVHNHYKRLNHAQ--------- 58
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+ +EL KSN+LLMGPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 59 -------KNSEIELAKSNILLMGPTGCGKTLLAQTLARTLDVPFTMADATTLTEAGYVGE 111
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 112 DVENIILKLLQASEYNVEKAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 171
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I+ R + S++GFGA VR N
Sbjct: 172 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAARGKGSAMGFGADVRDN 231
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
G+ + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNA
Sbjct: 232 DDRGI------GEIFTELEPEDLLRFGLIPEFVGRLPVLATLEDLDEDALVTILTQPKNA 285
Query: 550 L 550
L
Sbjct: 286 L 286
>gi|237755490|ref|ZP_04584112.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237692354|gb|EEP61340.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 408
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 180/297 (60%), Positives = 221/297 (74%), Gaps = 24/297 (8%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
NL E LPTP EI LD++VIGQE+AKK+LSVAVYNHYKRIY L K
Sbjct: 51 ENLSE-LPTPAEIKAKLDEYVIGQERAKKILSVAVYNHYKRIYQKELFK----------- 98
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
D +VE+EKSN+LL+GPTGSGKTLLA+TLAR +NVPF IADAT +T+AGYVGEDVESI
Sbjct: 99 ---DKDVEIEKSNILLIGPTGSGKTLLARTLARILNVPFAIADATNITEAGYVGEDVESI 155
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA-ESLNISRDVSGEGVQQALLKMLEGTIV 433
L +LL A+++VEAA++G+VYIDEVDKI KK+ ++ +I+RDVSGEGVQQALLK+LEGTI
Sbjct: 156 LARLLQNADYDVEAAEKGIVYIDEVDKIAKKSGDNPSITRDVSGEGVQQALLKILEGTIA 215
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 493
NVP +G RKHP + IQ+DT +ILFI GGAFV LE I +R SIGFGA +++
Sbjct: 216 NVPPQGGRKHPHQEFIQIDTTNILFILGGAFVGLEDIIKQRIGKKSIGFGADIKSK---- 271
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ LL V+ DLI +GLIPEF+GR P++ +L L ED LV+VLTEPKNAL
Sbjct: 272 ----SEEKDLLSLVQPEDLIKFGLIPEFLGRIPVIATLEELDEDALVRVLTEPKNAL 324
>gi|188996269|ref|YP_001930520.1| ATP-dependent protease ATP-binding subunit ClpX
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188931336|gb|ACD65966.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 408
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/291 (61%), Positives = 217/291 (74%), Gaps = 23/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD++VIGQEKAKK+LSVAVYNHYKRIY L K D +
Sbjct: 56 LPTPAEIKAKLDEYVIGQEKAKKILSVAVYNHYKRIYQKELFK--------------DKD 101
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+EKSN+LL+GPTGSGKTLLA+TLAR +NVPF IADAT +T+AGYVGEDVESIL +LL
Sbjct: 102 VEIEKSNILLIGPTGSGKTLLARTLARILNVPFAIADATNITEAGYVGEDVESILARLLQ 161
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKA-ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VEAA++G+VYIDEVDKI KK+ ++ +I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 162 NADYDVEAAEKGIVYIDEVDKIAKKSGDNPSITRDVSGEGVQQALLKILEGTIANVPPQG 221
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFI GGAFV LE I +R SIGFGA +++
Sbjct: 222 GRKHPHQEFIQIDTTNILFILGGAFVGLEDIIKQRIGKKSIGFGADIKSKSE-------- 273
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL V+ DLI +GLIPEF+GR P++ +L L ED LV+VLTEPKNAL
Sbjct: 274 EKELLSLVQPEDLIKFGLIPEFLGRIPVIATLEELDEDALVRVLTEPKNAL 324
>gi|399992449|ref|YP_006572689.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|398657004|gb|AFO90970.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 422
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 223/290 (76%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA K GS +
Sbjct: 63 VPTPKDICEVLDDYVIGQAMAKRVLSVAVHNHYKRLNHAQ-KAGS--------------D 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I +R + S++GFGA VR + AGV +
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIKQRGKGSAMGFGADVRDDSDAGVGET--- 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +E DL+ +GLIPEFVGR P+L +L L ED L+ +LT+PKNAL
Sbjct: 285 ---FKDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKPKNAL 331
>gi|400754135|ref|YP_006562503.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Phaeobacter
gallaeciensis 2.10]
gi|398653288|gb|AFO87258.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Phaeobacter
gallaeciensis 2.10]
Length = 422
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 223/290 (76%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA K GS +
Sbjct: 63 VPTPKDICEVLDDYVIGQAMAKRVLSVAVHNHYKRLNHAQ-KAGS--------------D 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I +R + S++GFGA VR + AGV +
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIKQRGKGSAMGFGADVRDDSDAGVGET--- 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +E DL+ +GLIPEFVGR P+L +L L ED L+ +LT+PKNAL
Sbjct: 285 ---FKDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKPKNAL 331
>gi|254512525|ref|ZP_05124592.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacteraceae bacterium KLH11]
gi|221536236|gb|EEE39224.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacteraceae bacterium KLH11]
Length = 421
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 172/301 (57%), Positives = 226/301 (75%), Gaps = 21/301 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA K GS
Sbjct: 52 TKASGLKSSDGVPTPKDICEVLDDYVIGQATAKRVLSVAVHNHYKRLNHAQ-KAGS---- 106
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 107 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VR N
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDN 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT PKNA
Sbjct: 277 DDRGV------GEIFKELEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTSPKNA 330
Query: 550 L 550
L
Sbjct: 331 L 331
>gi|416405033|ref|ZP_11687844.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Crocosphaera
watsonii WH 0003]
gi|357261368|gb|EHJ10639.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Crocosphaera
watsonii WH 0003]
Length = 397
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 175/328 (53%), Positives = 229/328 (69%), Gaps = 27/328 (8%)
Query: 223 KMGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAK 282
+M PSN S +GG ++LP P EI LD++VIGQ++AK
Sbjct: 6 EMNPSNPADSQTPKRRAAKNGGSL------------KELPKPMEIKDYLDEYVIGQDEAK 53
Query: 283 KVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLA 342
KVLSVAVYNHYKR+ KKG + DN+EL+KSN+LLMGPTGSGKTLLA
Sbjct: 54 KVLSVAVYNHYKRLSLVQGKKGE----------QDQDNIELQKSNILLMGPTGSGKTLLA 103
Query: 343 KTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKI 402
+TLA+ + VPF +ADATTLT+AGYVGEDVE+IL +LL A+ +VE AQ+G++YIDE+DKI
Sbjct: 104 QTLAQILEVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYIDEIDKI 163
Query: 403 TKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGG 462
+K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +G RKHP D IQ+DT +ILFICGG
Sbjct: 164 ARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQGGRKHPYQDCIQIDTSNILFICGG 223
Query: 463 AFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFV 522
AFV L++ I +R S+GF P G + T+ L++ VE DL+ +G+IPEFV
Sbjct: 224 AFVGLDRVIEQRIGKKSMGFVRP-----GEGQSKEERTADLMQRVEPDDLVKFGMIPEFV 278
Query: 523 GRFPILVSLTALTEDQLVKVLTEPKNAL 550
GR P++ +L LTE+ L+ +LT+P+NAL
Sbjct: 279 GRIPVMAALNPLTEETLIAILTKPRNAL 306
>gi|118497647|ref|YP_898697.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
novicida U112]
gi|194323618|ref|ZP_03057394.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
novicida FTE]
gi|118423553|gb|ABK89943.1| ATP-dependent Clp protease subunit X [Francisella novicida U112]
gi|194321982|gb|EDX19464.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
tularensis subsp. novicida FTE]
Length = 417
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 179/324 (55%), Positives = 222/324 (68%), Gaps = 25/324 (7%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRDGNICNECVSKCAEKIRSSGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL+KSNVLL+GPTGSGKTL A+TLA
Sbjct: 82 VAVYNHYKRI-TSNLTK--------------DDDTELKKSNVLLIGPTGSGKTLFAQTLA 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT DILFICGGAF
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAG 246
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK I R SIGF A V + +D L++ +ES DL +GLIPE +GR P
Sbjct: 247 IEKVIKHRMDKVSIGFNADVIQQKNSLDSD-----KLMQKIESEDLTRFGLIPELIGRLP 301
Query: 527 ILVSLTALTEDQLVKVLTEPKNAL 550
I+ L L E+ LV++LTEPKNAL
Sbjct: 302 IVTVLNELKEEDLVRILTEPKNAL 325
>gi|260222836|emb|CBA32802.1| ATP-dependent Clp protease ATP-binding subunit clpX [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 421
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 218/291 (74%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP +I LD +VIGQE AK+ L+VAVYNHYKR+ H K D
Sbjct: 64 DLPTPADIKANLDNYVIGQEPAKRTLAVAVYNHYKRLKHKEKAK--------------KD 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIVLKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ + +T+
Sbjct: 230 GRKHPNQDFVQIDTTNILFICGGAFAGLEKVIESRTESSGIGFGAAVKSKQQRALTE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + VE DLI +GLIPE VGR P++ +L LTE+ LV++LTEPKNAL
Sbjct: 287 ---VFKEVEPEDLIKFGLIPELVGRMPVVATLAELTEEALVQILTEPKNAL 334
>gi|221068423|ref|ZP_03544528.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Comamonas
testosteroni KF-1]
gi|299533086|ref|ZP_07046472.1| ATP-dependent protease ATP-binding subunit ClpX [Comamonas
testosteroni S44]
gi|418531530|ref|ZP_13097444.1| ATP-dependent protease ATP-binding subunit ClpX [Comamonas
testosteroni ATCC 11996]
gi|220713446|gb|EED68814.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Comamonas
testosteroni KF-1]
gi|298718971|gb|EFI59942.1| ATP-dependent protease ATP-binding subunit ClpX [Comamonas
testosteroni S44]
gi|371451484|gb|EHN64522.1| ATP-dependent protease ATP-binding subunit ClpX [Comamonas
testosteroni ATCC 11996]
Length = 420
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 219/291 (75%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE+AK+ L+VAVYNHYKR+ H + K G D
Sbjct: 63 DLPTPAEIKANLDNYVIGQEQAKRTLAVAVYNHYKRLNHKD-KAGK-------------D 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARQLNVPFVMADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
E++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ ++P +G
Sbjct: 169 QSCEYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASIPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFIC GAF LEK I R + S IGFGA V++ + +
Sbjct: 229 GRKHPNQDFLQIDTTNILFICSGAFAGLEKVIENRTEASGIGFGATVKSKKQRSI----- 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S + +E DLI +G+IPE VGR P++ +L L+E+ LV++LTEPKNAL
Sbjct: 284 -SEMFLEIEPEDLIKFGIIPELVGRMPVVTALAELSEEALVQILTEPKNAL 333
>gi|297538720|ref|YP_003674489.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylotenera
versatilis 301]
gi|297258067|gb|ADI29912.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylotenera
versatilis 301]
Length = 426
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 169/292 (57%), Positives = 220/292 (75%), Gaps = 16/292 (5%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP+EICK LD++VIGQ AKK L+VAVYNHYKR+ H NL G
Sbjct: 61 QSLPTPQEICKILDQYVIGQTHAKKNLAVAVYNHYKRLGHNNLSDGG-----------QK 109
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 110 DEVEISKSNILLIGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVGEDVENIMQKL 169
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE A++G+VYIDEVDKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ ++P +
Sbjct: 170 LQKCDYDVEKAKRGIVYIDEVDKISRKSENASITRDVSGEGVQQALLKLIEGTVASIPPQ 229
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + +Q+DT +ILFICGGAF LEK I R + IGFGA V+ G D
Sbjct: 230 GGRKHPNQEFVQLDTTNILFICGGAFDGLEKVIRLRSEKGGIGFGAEVK-----GKNDIR 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++L VE DLI +GLIPEF+GR P++ +L +L E L+ +LTEPKNAL
Sbjct: 285 QVGAVLRDVEPEDLIKFGLIPEFIGRLPVVATLESLDEAALMTILTEPKNAL 336
>gi|294141767|ref|YP_003557745.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
violacea DSS12]
gi|293328236|dbj|BAJ02967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
violacea DSS12]
Length = 418
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 173/291 (59%), Positives = 222/291 (76%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQEKAKKVLSVAVYNHYKR+ ++N PK D
Sbjct: 58 LPTPHELRAHLDDYVIGQEKAKKVLSVAVYNHYKRLKNSN--------PK--------DG 101
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+T AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 102 VELGKSNILLIGPTGSGKTLLAETFARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 161
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 162 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 221
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R Q S IGFGA ++ G +D A
Sbjct: 222 RKHPQQEFLQVDTSKILFICGGAFSGLEKVIEQRSQTGSGIGFGAQIK-----GESDKAT 276
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L VE DL+ YGLIPEF+GR P+L +L L ED LV++L+EPKNAL
Sbjct: 277 ISEILMQVEPEDLVKYGLIPEFIGRLPVLSTLAELDEDALVQILSEPKNAL 327
>gi|208779708|ref|ZP_03247052.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
novicida FTG]
gi|254373012|ref|ZP_04988501.1| hypothetical protein FTCG_00586 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570739|gb|EDN36393.1| hypothetical protein FTCG_00586 [Francisella novicida GA99-3549]
gi|208744163|gb|EDZ90463.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
novicida FTG]
Length = 417
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 179/324 (55%), Positives = 222/324 (68%), Gaps = 25/324 (7%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRDGNICNECVSKCAEKIRSTGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL+KSNVLL+GPTGSGKTL A+TLA
Sbjct: 82 VAVYNHYKRI-TSNLTK--------------DDDTELKKSNVLLIGPTGSGKTLFAQTLA 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT DILFICGGAF
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAG 246
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK I R SIGF A V + +D L++ +ES DL +GLIPE +GR P
Sbjct: 247 IEKVIKHRMDKVSIGFNADVIQQKNSLDSD-----KLMQKIESEDLTRFGLIPELIGRLP 301
Query: 527 ILVSLTALTEDQLVKVLTEPKNAL 550
I+ L L E+ LV++LTEPKNAL
Sbjct: 302 IVTVLNELKEEDLVRILTEPKNAL 325
>gi|91787907|ref|YP_548859.1| ATP-dependent protease ATP-binding subunit ClpX [Polaromonas sp.
JS666]
gi|123165007|sp|Q12BY1.1|CLPX_POLSJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91697132|gb|ABE43961.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Polaromonas
sp. JS666]
Length = 421
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 171/291 (58%), Positives = 216/291 (74%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE AK+ L+VAVYNHYKR+ H K D
Sbjct: 64 DLPTPAEIKATLDGYVIGQEPAKRTLAVAVYNHYKRLRHKEKAK--------------KD 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELTKSNILLIGPTGSGKTLLAQTLARTLNVPFVMADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ +T++
Sbjct: 230 GRKHPNQDFLQVDTTNILFICGGAFSGLEKVIENRTEASGIGFGALVKSKKTRSLTES-- 287
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DLI +GLIPE VGR P++ +L LTED LV++LTEPKNA+
Sbjct: 288 ----FKEVEPEDLIKFGLIPELVGRMPVVATLAELTEDALVQILTEPKNAV 334
>gi|86605508|ref|YP_474271.1| ATP-dependent protease ATP-binding subunit ClpX [Synechococcus sp.
JA-3-3Ab]
gi|123507236|sp|Q2JW64.1|CLPX_SYNJA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|86554050|gb|ABC99008.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Synechococcus
sp. JA-3-3Ab]
Length = 448
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 221/290 (76%), Gaps = 11/290 (3%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQEKAKKVLSVAVYNHYKR+ + A P + A + D+
Sbjct: 79 LPKPREIMRYLDQYVIGQEKAKKVLSVAVYNHYKRL-------AAKANPNSLGAAELDE- 130
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+IL +LL
Sbjct: 131 VELQKSNILVIGPTGSGKTLLAETLARMLDVPFAVADATTLTEAGYVGEDVENILLRLLQ 190
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +G
Sbjct: 191 VADMDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVPPQGG 250
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT +ILFICGGAFV LEK I +R S+GF ++ + VT
Sbjct: 251 RKHPYQDCIQIDTSNILFICGGAFVGLEKVIEQRIGKKSMGF---IKPGEQLAVTREQRL 307
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L+++E DLI YG+IPEF+GR P++ +L L E L +LT+PKNA+
Sbjct: 308 ADALKALEPEDLIKYGMIPEFIGRLPVVATLDPLDEKALEAILTQPKNAI 357
>gi|84499431|ref|ZP_00997719.1| ATP-dependent protease ATP-binding subunit [Oceanicola batsensis
HTCC2597]
gi|84392575|gb|EAQ04786.1| ATP-dependent protease ATP-binding subunit [Oceanicola batsensis
HTCC2597]
Length = 422
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 170/301 (56%), Positives = 225/301 (74%), Gaps = 21/301 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +PTP+EIC LD +VIGQ+ AK+VLSVAV+NHYKR+ HA G
Sbjct: 52 TKSTGLKSSEGVPTPQEICDVLDDYVIGQKIAKRVLSVAVHNHYKRLNHAAKSGG----- 106
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 107 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQSSEYNVEKAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + S++GFGA VR N
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAMGFGADVRDN 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + + +E DL+ +GLIPEFVGR P+L +L L E+ LV +LTEPKNA
Sbjct: 277 DERGV------GEVFQDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALVTILTEPKNA 330
Query: 550 L 550
L
Sbjct: 331 L 331
>gi|254374462|ref|ZP_04989943.1| hypothetical protein FTDG_00631 [Francisella novicida GA99-3548]
gi|385793030|ref|YP_005826006.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|151572181|gb|EDN37835.1| hypothetical protein FTDG_00631 [Francisella novicida GA99-3548]
gi|332678355|gb|AEE87484.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
cf. novicida Fx1]
Length = 417
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 179/324 (55%), Positives = 222/324 (68%), Gaps = 25/324 (7%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRDGNICNECVSKCAEKIRSTGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL+KSNVLL+GPTGSGKTL A+TLA
Sbjct: 82 VAVYNHYKRI-TSNLTK--------------DDDTELKKSNVLLIGPTGSGKTLFAQTLA 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT DILFICGGAF
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAG 246
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK I R SIGF A V + +D L++ +ES DL +GLIPE +GR P
Sbjct: 247 IEKVIKHRMDKVSIGFNADVIQQKNSLDSD-----KLMQKIESEDLTRFGLIPELIGRLP 301
Query: 527 ILVSLTALTEDQLVKVLTEPKNAL 550
I+ L L E+ LV++LTEPKNAL
Sbjct: 302 IVTVLNELKEEDLVRILTEPKNAL 325
>gi|422302999|ref|ZP_16390355.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9806]
gi|389792059|emb|CCI12153.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9806]
Length = 444
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 220/292 (75%), Gaps = 12/292 (4%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K SG P +
Sbjct: 74 EQIPKPREIKKYLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKASGGNP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 245
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P +
Sbjct: 246 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDGQ----ASKDK 301
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
V + LL+ + DL+ +G+IPEFVGR P+L +L+ L E+ L+ +LT+P+NAL
Sbjct: 302 VAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNAL 353
>gi|349575767|ref|ZP_08887673.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
shayeganii 871]
gi|348012631|gb|EGY51572.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
shayeganii 871]
Length = 435
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 172/290 (59%), Positives = 216/290 (74%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD+ VIGQE+AKK L+VAVYNHYKR+ H PK DN
Sbjct: 78 LPTPAEIVANLDQHVIGQEQAKKALAVAVYNHYKRLRH----------PKEG------DN 121
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR +NVPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 122 VELSKSNILLIGPTGSGKTLLAQSLARKLNVPFVMADATTLTEAGYVGEDVEQIITKLLG 181
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 182 KCDFDVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 241
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + DA +T
Sbjct: 242 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSKDE----DADIT 297
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L E VE DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL
Sbjct: 298 -ELFEVVEPEDLIKFGLIPELIGRLPVIATLAELDEDALINILTEPKNAL 346
>gi|425472439|ref|ZP_18851280.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9701]
gi|389881466|emb|CCI37972.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9701]
Length = 444
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 220/292 (75%), Gaps = 12/292 (4%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K SG P +
Sbjct: 74 EQIPKPREIKKYLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKASGGSP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 245
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P +
Sbjct: 246 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDGQ----ASKDK 301
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
V + LL+ + DL+ +G+IPEFVGR P+L +L+ L E+ L+ +LT+P+NAL
Sbjct: 302 VAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNAL 353
>gi|67923460|ref|ZP_00516937.1| ClpX, ATPase regulatory subunit [Crocosphaera watsonii WH 8501]
gi|67854695|gb|EAM49977.1| ClpX, ATPase regulatory subunit [Crocosphaera watsonii WH 8501]
Length = 444
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 175/328 (53%), Positives = 229/328 (69%), Gaps = 27/328 (8%)
Query: 223 KMGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAK 282
+M PSN S +GG ++LP P EI LD++VIGQ++AK
Sbjct: 53 EMNPSNPADSQTPKRRAAKNGGSL------------KELPKPMEIKDYLDEYVIGQDEAK 100
Query: 283 KVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLA 342
KVLSVAVYNHYKR+ KKG + DN+EL+KSN+LLMGPTGSGKTLLA
Sbjct: 101 KVLSVAVYNHYKRLSLVQGKKGE----------QDQDNIELQKSNILLMGPTGSGKTLLA 150
Query: 343 KTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKI 402
+TLA+ + VPF +ADATTLT+AGYVGEDVE+IL +LL A+ +VE AQ+G++YIDE+DKI
Sbjct: 151 QTLAQILEVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYIDEIDKI 210
Query: 403 TKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGG 462
+K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +G RKHP D IQ+DT +ILFICGG
Sbjct: 211 ARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQGGRKHPYQDCIQIDTSNILFICGG 270
Query: 463 AFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFV 522
AFV L++ I +R S+GF P G + T+ L++ VE DL+ +G+IPEFV
Sbjct: 271 AFVGLDRVIEQRIGKKSMGFVRP-----GEGQSKEERTADLMQRVEPDDLVKFGMIPEFV 325
Query: 523 GRFPILVSLTALTEDQLVKVLTEPKNAL 550
GR P++ +L LTE+ L+ +LT+P+NAL
Sbjct: 326 GRIPVMAALNPLTEETLIAILTKPRNAL 353
>gi|429744136|ref|ZP_19277646.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria sp.
oral taxon 020 str. F0370]
gi|429163566|gb|EKY05776.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria sp.
oral taxon 020 str. F0370]
Length = 416
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 171/304 (56%), Positives = 217/304 (71%), Gaps = 21/304 (6%)
Query: 247 GGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSG 306
G G G + LPTP EI LD VIGQE+AKK L+VAVYNHYKR+ H
Sbjct: 46 GAGKADGSDGTADKLPTPAEIVANLDDHVIGQEQAKKALAVAVYNHYKRLRH-------- 97
Query: 307 AEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
P+ VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGY
Sbjct: 98 --PQAGG------KVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGY 149
Query: 367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
VGEDVE I+ KLL + +FNVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK
Sbjct: 150 VGEDVEQIITKLLGKCDFNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLK 209
Query: 427 MLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV 486
++EGT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I +R + IGFGA V
Sbjct: 210 LIEGTVASVPPQGGRKHPNQDFVQVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASV 269
Query: 487 RANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEP 546
+ + A + L E VE DLI +GLIPE +GR P++ +L L ED L+ +LTEP
Sbjct: 270 HSK-----DENAAITELFEIVEPEDLIKFGLIPELIGRLPVIATLAELDEDALINILTEP 324
Query: 547 KNAL 550
KNAL
Sbjct: 325 KNAL 328
>gi|425439907|ref|ZP_18820219.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9717]
gi|389719746|emb|CCH96447.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9717]
Length = 444
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 220/292 (75%), Gaps = 12/292 (4%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K G P +
Sbjct: 74 EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKAGGGSP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 245
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P + +
Sbjct: 246 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDSQ----ASKDK 301
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
V + LL+ + DL+ +G+IPEFVGR PIL +L+ L E+ L+ +LT+P+NAL
Sbjct: 302 VAAGLLKQMTPDDLVKFGMIPEFVGRIPILAALSPLDEEALIAILTQPRNAL 353
>gi|89256250|ref|YP_513612.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica LVS]
gi|156502311|ref|YP_001428376.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|254367563|ref|ZP_04983589.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
holarctica 257]
gi|254369240|ref|ZP_04985252.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
holarctica FSC022]
gi|422938669|ref|YP_007011816.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica FSC200]
gi|423050598|ref|YP_007009032.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica F92]
gi|89144081|emb|CAJ79332.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
holarctica LVS]
gi|134253379|gb|EBA52473.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
holarctica 257]
gi|156252914|gb|ABU61420.1| ATP-dependent Clp protease, ATP-binding subunit [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|157122190|gb|EDO66330.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
holarctica FSC022]
gi|407293820|gb|AFT92726.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica FSC200]
gi|421951320|gb|AFX70569.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica F92]
Length = 417
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 179/324 (55%), Positives = 222/324 (68%), Gaps = 25/324 (7%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRDGNICNECVSKCAEKIRSTGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL+KSNVLL+GPTGSGKTL A+TLA
Sbjct: 82 VAVYNHYKRI-TSNLTK--------------DDDTELKKSNVLLIGPTGSGKTLFAQTLA 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT DILFICGGAF
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAG 246
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK I R SIGF A V + +D L++ +ES DL +GLIPE +GR P
Sbjct: 247 IEKVIKHRMDKVSIGFNADVIQQKNSLDSD-----KLMQKIESEDLTRFGLIPELIGRLP 301
Query: 527 ILVSLTALTEDQLVKVLTEPKNAL 550
I+ L L E+ LV++LTEPKNAL
Sbjct: 302 IVTVLNELKEEDLVRILTEPKNAL 325
>gi|99081367|ref|YP_613521.1| ATP-dependent protease ATP-binding subunit ClpX [Ruegeria sp.
TM1040]
gi|123077615|sp|Q1GGF7.1|CLPX_SILST RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|99037647|gb|ABF64259.1| ATP-dependent Clp protease; ATP-binding subunit ClpX [Ruegeria sp.
TM1040]
Length = 421
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 170/301 (56%), Positives = 225/301 (74%), Gaps = 21/301 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA K G
Sbjct: 52 TKASGMKATDGVPTPKDICEVLDDYVIGQATAKRVLSVAVHNHYKRLNHAQ-KAG----- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ---------NDIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I +R + S++GFGA VR
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIKQRGKGSAMGFGADVREE 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
AGV + +E DL+ +GLIPEFVGR P+L +L L ED L+ +LT+PKNA
Sbjct: 277 SDAGVGET------FRDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKPKNA 330
Query: 550 L 550
L
Sbjct: 331 L 331
>gi|159043936|ref|YP_001532730.1| ATP-dependent protease ATP-binding subunit ClpX [Dinoroseobacter
shibae DFL 12]
gi|189044133|sp|A8LJA7.1|CLPX_DINSH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|157911696|gb|ABV93129.1| ATP-dependent Clp protease [Dinoroseobacter shibae DFL 12]
Length = 419
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 172/301 (57%), Positives = 225/301 (74%), Gaps = 23/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +PTP+EIC LD +VIGQ AK+VLSVAV+NHYKR+ HA
Sbjct: 51 TKSSGLKSSEGVPTPQEICDVLDDYVIGQSHAKRVLSVAVHNHYKRLNHAG--------- 101
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
KT ++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 102 KT--------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 153
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 154 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 213
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S+IGFGA V+ N
Sbjct: 214 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSAIGFGADVKEN 273
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + +E DL+ +GLIPEFVGR P++ +LT L ED LV +LT+PKNA
Sbjct: 274 DTRGV------GEMFGELEPEDLLKFGLIPEFVGRLPVIATLTDLDEDALVTILTQPKNA 327
Query: 550 L 550
L
Sbjct: 328 L 328
>gi|358637943|dbj|BAL25240.1| ATP-dependent protease ATP-binding subunit [Azoarcus sp. KH32C]
Length = 422
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 168/293 (57%), Positives = 222/293 (75%), Gaps = 21/293 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G LPTP+EIC+ L+++VIGQ +AK++LSVAVYNHYKR+ H + KK
Sbjct: 61 GNKLPTPQEICEILNQYVIGQPQAKRILSVAVYNHYKRLRHISGKK-------------- 106
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
++VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -EDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQK 165
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI ++P
Sbjct: 166 LLQKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASIPP 225
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP D IQ+DT +ILFICGGAF LEK I R + IGFGA V++ V+++
Sbjct: 226 QGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVIRNRTEKIGIGFGAEVKSRQGKDVSES 285
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
VE DL+ +GLIPEFVGR P++ +L L E L+++L EPKNAL
Sbjct: 286 ------FRQVEPEDLVKFGLIPEFVGRLPVVATLQELDEAALIQILIEPKNAL 332
>gi|406942058|gb|EKD74393.1| hypothetical protein ACD_44C00469G0003 [uncultured bacterium]
Length = 422
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 169/290 (58%), Positives = 218/290 (75%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EICK LD++VIGQ AKK LSVAVYNHYK++ + + D +
Sbjct: 63 LPTPAEICKILDEYVIGQSIAKKTLSVAVYNHYKKLRNKH----------------KDGD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELNKSNILLIGPTGSGKTLLAETLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 KCDYDVAKAQTGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DTK+ILFICGGAF LEK I ER + S IGF A + + DA
Sbjct: 227 RKHPQQEFIQVDTKNILFICGGAFAGLEKVIRERSEKSGIGFSAEIHSK-----EDAKSI 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE +DLI +GLIPE +GR P++ +L L ++ L+++LTEPKNAL
Sbjct: 282 DQLLHEVEPADLIRFGLIPELIGRLPVVATLEELDKEVLLRILTEPKNAL 331
>gi|217979045|ref|YP_002363192.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylocella
silvestris BL2]
gi|254763855|sp|B8EIL3.1|CLPX_METSB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|217504421|gb|ACK51830.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylocella
silvestris BL2]
Length = 421
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 221/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ +AK+VLSVAV+NHYKR+ HA ++
Sbjct: 63 IPTPKEICKVLDDYVIGQPQAKRVLSVAVHNHYKRLNHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISTRGKGTSIGFGATVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ +GLIPEFVGR P++ +L L E+ L K+LTEPKNAL
Sbjct: 281 GEIFRKVEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALKKILTEPKNAL 330
>gi|114771110|ref|ZP_01448550.1| ATP-dependent protease ATP-binding subunit [Rhodobacterales
bacterium HTCC2255]
gi|114548392|gb|EAU51278.1| ATP-dependent protease ATP-binding subunit [alpha proteobacterium
HTCC2255]
Length = 420
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 168/301 (55%), Positives = 225/301 (74%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G GE +PTP +IC+ LD +VIGQ+ AK+VLSVAV+NHYKR+ H+
Sbjct: 52 AKAGVVKSGEGVPTPAKICQILDDYVIGQDVAKRVLSVAVHNHYKRLDHS---------- 101
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D ++ +EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 102 ------DTNEEIELSKSNILLVGPTGCGKTLLAQTLARVIDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE A++G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQASEYNVERAERGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +++DT +ILFICGGAF L+K IS+R Q S IGFGA V+
Sbjct: 216 GTVASVPPQGGRKHPQQEFLKVDTTNILFICGGAFAGLDKIISQRGQGSGIGFGADVKDE 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
G+ + +E DL+ +GLIPEFVGR P+L +LT L ED LV +L+EPKNA
Sbjct: 276 ESRGI------GEIFSEMEPEDLLKFGLIPEFVGRLPVLATLTDLDEDALVTILSEPKNA 329
Query: 550 L 550
L
Sbjct: 330 L 330
>gi|163793183|ref|ZP_02187159.1| ATP-dependent protease Clp [alpha proteobacterium BAL199]
gi|159181829|gb|EDP66341.1| ATP-dependent protease Clp [alpha proteobacterium BAL199]
Length = 424
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 171/290 (58%), Positives = 220/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP +IC+ LD +VIGQ KAK++LSVAV+NHYKR+ H +++
Sbjct: 66 VPTPGDICQVLDDYVIGQLKAKRILSVAVHNHYKRLAHGQ----------------KNND 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + SSIGFGA VRA D T
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISNRSRGSSIGFGADVRA------PDDRRT 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNAL
Sbjct: 284 GEVLREVEPEDLLKFGLIPEFVGRLPVLATLEDLEEDALVDILTKPKNAL 333
>gi|89900347|ref|YP_522818.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodoferax
ferrireducens T118]
gi|122479496|sp|Q21Y66.1|CLPX_RHOFD RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|89345084|gb|ABD69287.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodoferax
ferrireducens T118]
Length = 421
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 217/291 (74%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI LD +VIGQE AK+ L+VAVYNHYKR+ H K D
Sbjct: 64 ELPTPLEIKTNLDNYVIGQEPAKRTLAVAVYNHYKRLRHQEKAKK--------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIVLKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R Q S +GFGA V++ + +T+
Sbjct: 230 GRKHPNQDFVQVDTTNILFICGGAFSGLEKVIDNRTQSSGMGFGATVKSKEQRSLTE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + VE DLI +GLIPE VGR P+L +L L+ED LV++LTEPKNAL
Sbjct: 287 ---VFKEVEPEDLIKFGLIPELVGRMPVLATLAELSEDALVQILTEPKNAL 334
>gi|86137327|ref|ZP_01055904.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp. MED193]
gi|85825662|gb|EAQ45860.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp. MED193]
Length = 422
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 170/301 (56%), Positives = 227/301 (75%), Gaps = 21/301 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +P+PK+IC+ LD +VIGQ AKKVLSVAV+NHYKR+ HA K G
Sbjct: 52 TKASGLKATDGVPSPKDICEVLDDYVIGQAMAKKVLSVAVHNHYKRLNHAQ-KAG----- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ---------NDIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + S++GFGA VR N
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAMGFGADVRNN 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNA
Sbjct: 277 DDRGV------GEIFQELEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTKPKNA 330
Query: 550 L 550
L
Sbjct: 331 L 331
>gi|159030461|emb|CAO91363.1| clpX [Microcystis aeruginosa PCC 7806]
Length = 444
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 220/292 (75%), Gaps = 12/292 (4%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K G P +
Sbjct: 74 EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKAGGGSP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 245
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P + +
Sbjct: 246 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDSQ----ASKDK 301
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
V + LL+ + DL+ +G+IPEFVGR P+L +L+ L E+ L+ +LT+P+NAL
Sbjct: 302 VAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNAL 353
>gi|425445343|ref|ZP_18825375.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9443]
gi|389734666|emb|CCI01692.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9443]
Length = 444
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 220/292 (75%), Gaps = 12/292 (4%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K G P +
Sbjct: 74 EQIPKPREIKKYLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKAGGGNP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 245
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P + +
Sbjct: 246 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDSQ----ASKDK 301
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
V + LL+ + DL+ +G+IPEFVGR PIL +L+ L E+ L+ +LT+P+NAL
Sbjct: 302 VAAGLLKQMTPDDLVKFGMIPEFVGRIPILAALSPLDEEALIAILTQPRNAL 353
>gi|425453824|ref|ZP_18833577.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9807]
gi|389800129|emb|CCI20439.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9807]
Length = 444
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 170/294 (57%), Positives = 221/294 (75%), Gaps = 16/294 (5%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K G P +
Sbjct: 74 EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKAGGGSP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 245
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP--VRANMRAGVTD 496
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P +AN
Sbjct: 246 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDSQAN------K 299
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
V + LL+ + DL+ +G+IPEFVGR PIL +L+ L E+ L+ +LT+P+NAL
Sbjct: 300 DKVAAGLLKQMTPDDLVKFGMIPEFVGRIPILAALSPLDEEALIAILTQPRNAL 353
>gi|442771952|gb|AGC72624.1| ATP-dependent Clp protease ATP-binding subunit ClpX [uncultured
bacterium A1Q1_fos_1134]
Length = 421
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 171/298 (57%), Positives = 218/298 (73%), Gaps = 20/298 (6%)
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
G DLPTP EI LD +VIGQE AK+ L+VAVYNHYKR+ H K
Sbjct: 57 AGREAKTDLPTPSEIKANLDNYVIGQEAAKRTLAVAVYNHYKRLRH-----------KDK 105
Query: 313 AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVE 372
AA D+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE
Sbjct: 106 AA---KDDVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVE 162
Query: 373 SILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI 432
+I+ KLL + VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 163 NIIQKLLQSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTM 222
Query: 433 VNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA 492
+VP +G RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ +
Sbjct: 223 ASVPPQGGRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVKSKKQR 282
Query: 493 GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ S + + +E DLI +GLIPE VGR P++ +L L ED LV++LTEPKNAL
Sbjct: 283 SL------SEVFQEIEPEDLIKFGLIPELVGRMPVVAALAELGEDALVQILTEPKNAL 334
>gi|56707750|ref|YP_169646.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis SCHU S4]
gi|110670221|ref|YP_666778.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis FSC198]
gi|254370253|ref|ZP_04986259.1| hypothetical protein FTBG_01378 [Francisella tularensis subsp.
tularensis FSC033]
gi|254874563|ref|ZP_05247273.1| ATP-dependent clp protease ATP-binding subunit clpX [Francisella
tularensis subsp. tularensis MA00-2987]
gi|379717000|ref|YP_005305336.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis TIGB03]
gi|379725604|ref|YP_005317790.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis TI0902]
gi|385794386|ref|YP_005830792.1| ATP-dependent protease ATP-binding subunit [Francisella tularensis
subsp. tularensis NE061598]
gi|421755255|ref|ZP_16192205.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 80700075]
gi|61211391|sp|Q5NH46.1|CLPX_FRATT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|56604242|emb|CAG45258.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320554|emb|CAL08641.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
tularensis FSC198]
gi|151568497|gb|EDN34151.1| hypothetical protein FTBG_01378 [Francisella tularensis subsp.
tularensis FSC033]
gi|254840562|gb|EET18998.1| ATP-dependent clp protease ATP-binding subunit clpX [Francisella
tularensis subsp. tularensis MA00-2987]
gi|282158921|gb|ADA78312.1| ATP-dependent protease ATP-binding subunit [Francisella tularensis
subsp. tularensis NE061598]
gi|377827053|gb|AFB80301.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis TI0902]
gi|377828677|gb|AFB78756.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis TIGB03]
gi|409088590|gb|EKM88654.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 80700075]
Length = 417
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 178/324 (54%), Positives = 222/324 (68%), Gaps = 25/324 (7%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRDGNICNECVSKCAEKIRSTGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL+KSNVLL+GPTGSGKTL A+TLA
Sbjct: 82 VAVYNHYKRI-TSNLTK--------------DDDTELKKSNVLLIGPTGSGKTLFAQTLA 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT DILFICGGAF
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAG 246
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK I R SIGF + V + +D L++ +ES DL +GLIPE +GR P
Sbjct: 247 IEKVIKHRMDKVSIGFNSDVIQQKNSLDSD-----KLMQKIESEDLTRFGLIPELIGRLP 301
Query: 527 ILVSLTALTEDQLVKVLTEPKNAL 550
I+ L L E+ LV++LTEPKNAL
Sbjct: 302 IVTVLNELKEEDLVRILTEPKNAL 325
>gi|425465977|ref|ZP_18845280.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9809]
gi|389831695|emb|CCI25351.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9809]
Length = 444
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 219/292 (75%), Gaps = 12/292 (4%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K SG P +
Sbjct: 74 EQIPKPREIKKYLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKASGGNP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D +EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DGIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 245
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P +
Sbjct: 246 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDGQ----ASKDK 301
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
V + LL+ + DL+ +G+IPEFVGR P+L +L+ L E+ L+ +LT+P+NAL
Sbjct: 302 VAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNAL 353
>gi|395762550|ref|ZP_10443219.1| ATP-dependent protease ATP-binding subunit ClpX [Janthinobacterium
lividum PAMC 25724]
Length = 422
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 217/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+EI LD++VIGQ+ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 DLPTPQEIAALLDQYVIGQQTAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
++EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DIELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QSCNYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +I+FICGGAF L K I+ R + S IGF A VR+ ++
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLSKVIANRSEKSGIGFSATVRSKSQSS------ 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L+ E DL+ +GLIPE VGR P++ +L LTE+ L+++L EPKNAL
Sbjct: 282 ASELMLQAEPEDLVKFGLIPELVGRLPVIATLAELTEEALIQILVEPKNAL 332
>gi|254477070|ref|ZP_05090456.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ruegeria sp.
R11]
gi|214031313|gb|EEB72148.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ruegeria sp.
R11]
Length = 422
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/290 (58%), Positives = 222/290 (76%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA K G ++
Sbjct: 63 VPTPKDICEVLDDYVIGQAMAKRVLSVAVHNHYKRLNHAQ-KAG--------------ND 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I +R + S++GFGA VR AGV +
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIKQRGKGSAMGFGADVREESDAGVGET--- 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +E DL+ +GLIPEFVGR P+L +L L ED L+ +LT+PKNAL
Sbjct: 285 ---FKDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKPKNAL 331
>gi|443660053|ref|ZP_21132511.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Microcystis
aeruginosa DIANCHI905]
gi|443332569|gb|ELS47169.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Microcystis
aeruginosa DIANCHI905]
Length = 425
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 220/292 (75%), Gaps = 12/292 (4%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K G P +
Sbjct: 55 EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKAGGGSP--------E 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 107 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 167 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P + +
Sbjct: 227 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDSQ----ASKDK 282
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
V + LL+ + DL+ +G+IPEFVGR P+L +L+ L E+ L+ +LT+P+NAL
Sbjct: 283 VAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNAL 334
>gi|126732555|ref|ZP_01748353.1| ATP-dependent protease ATP-binding subunit [Sagittula stellata
E-37]
gi|126707001|gb|EBA06069.1| ATP-dependent protease ATP-binding subunit [Sagittula stellata
E-37]
Length = 421
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/301 (56%), Positives = 227/301 (75%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP+EIC+ LD +VIGQ KAK+VLSVAV+NHYKR+ H+ +K S
Sbjct: 52 TKGAGLKSADGVPTPREICEVLDDYVIGQMKAKRVLSVAVHNHYKRLNHS--QKSS---- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + S++GFGA VR N
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAMGFGADVRDN 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + +E DL+ +GLIPEFVGR P++ +L L ED LV +LT+PKNA
Sbjct: 276 DDRGV------GEIFRDLEPEDLLKFGLIPEFVGRLPVVATLEDLDEDALVTILTQPKNA 329
Query: 550 L 550
L
Sbjct: 330 L 330
>gi|339503122|ref|YP_004690542.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Roseobacter
litoralis Och 149]
gi|338757115|gb|AEI93579.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Roseobacter
litoralis Och 149]
Length = 421
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/301 (56%), Positives = 224/301 (74%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC LD +VIGQ AK+VLSVAV+NHYKR+ HA +KG
Sbjct: 52 TKASGLKATDGVPTPKDICAVLDDYVIGQAMAKRVLSVAVHNHYKRLNHA--QKGG---- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I+ R + S++GFGA VR N
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAARGKGSAMGFGADVRGN 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNA
Sbjct: 276 DDRGV------GEIFTDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTQPKNA 329
Query: 550 L 550
L
Sbjct: 330 L 330
>gi|163751870|ref|ZP_02159084.1| ATP-dependent protease ATP-binding subunit [Shewanella benthica
KT99]
gi|161328220|gb|EDP99384.1| ATP-dependent protease ATP-binding subunit [Shewanella benthica
KT99]
Length = 425
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/291 (59%), Positives = 221/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQ+KAKKVLSVAVYNHYKR+ ++N K D
Sbjct: 65 LPTPHELRAHLDDYVIGQDKAKKVLSVAVYNHYKRLKNSNHK----------------DG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+T AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETFARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R + S IGFGA ++ G D A
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFSGLEKVIEQRSHKGSGIGFGAQIK-----GEDDKAT 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L VE DLI YGLIPEFVGR P+L +LT L E+ LV++L+EPKNAL
Sbjct: 284 ISEILMQVEPEDLIKYGLIPEFVGRLPVLSTLTELDEEALVQILSEPKNAL 334
>gi|166369014|ref|YP_001661287.1| ATP-dependent protease ATP-binding subunit ClpX [Microcystis
aeruginosa NIES-843]
gi|189044139|sp|B0JL96.1|CLPX_MICAN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166091387|dbj|BAG06095.1| ATP-dependent Clp protease ATPase subunit [Microcystis aeruginosa
NIES-843]
Length = 444
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 219/292 (75%), Gaps = 12/292 (4%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K G P +
Sbjct: 74 EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKAGGGSP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 245
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P +
Sbjct: 246 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDGQ----ASKDK 301
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
V + LL+ + DL+ +G+IPEFVGR PIL +L+ L E+ L+ +LT+P+NAL
Sbjct: 302 VAAGLLKQMTPDDLVKFGMIPEFVGRIPILAALSPLDEEALIAILTQPRNAL 353
>gi|120610145|ref|YP_969823.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax
citrulli AAC00-1]
gi|326316314|ref|YP_004233986.1| ATP-dependent Clp protease ATP-binding subunit clpX [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|166214750|sp|A1TM61.1|CLPX_ACIAC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120588609|gb|ABM32049.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidovorax
citrulli AAC00-1]
gi|323373150|gb|ADX45419.1| ATP-dependent Clp protease ATP-binding subunit clpX [Acidovorax
avenae subsp. avenae ATCC 19860]
Length = 421
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 217/291 (74%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE AK+ L+VAVYNHYKR+ H + K G D
Sbjct: 64 DLPTPSEIKANLDNYVIGQEIAKRTLAVAVYNHYKRLRHKD-KAGK-------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 EVELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVKSKKQRSLTE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +E DLI +GLIPE VGR P++ +L L+ED LV++LTEPKNAL
Sbjct: 287 ---VFTEIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTEPKNAL 334
>gi|218247704|ref|YP_002373075.1| ATP-dependent protease ATP-binding subunit ClpX [Cyanothece sp. PCC
8801]
gi|257060959|ref|YP_003138847.1| ATP-dependent protease ATP-binding subunit ClpX [Cyanothece sp. PCC
8802]
gi|226706582|sp|B7JW74.1|CLPX_CYAP8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|218168182|gb|ACK66919.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. PCC 8801]
gi|256591125|gb|ACV02012.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. PCC 8802]
Length = 448
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 221/290 (76%), Gaps = 14/290 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P+EI K LD++VIGQ++AKKVLSVAVYNHYKR+ +L G E ++D+
Sbjct: 82 IPKPREIKKYLDEYVIGQDEAKKVLSVAVYNHYKRL---SLASKPGEET-------SEDH 131
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL+KSN+LLMGPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +LL
Sbjct: 132 IELQKSNILLMGPTGSGKTLLAQTLAQILDVPFAVADATTLTEAGYVGEDVENILLRLLQ 191
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +G
Sbjct: 192 VADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVPPQGG 251
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT +ILFICGGAFV L+K I +RR S+GF P N +
Sbjct: 252 RKHPYQDCIQIDTSNILFICGGAFVGLDKVIEQRRGKKSMGFIRPGDTNQ----SKEKRA 307
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L++ E DL+ +G+IPEFVGR P++ SL L E+ L+ +LT+P+NAL
Sbjct: 308 ADLMQQAEPDDLVKFGMIPEFVGRIPVMASLEPLDEETLIAILTQPRNAL 357
>gi|124266486|ref|YP_001020490.1| ATP-dependent protease ATP-binding subunit ClpX [Methylibium
petroleiphilum PM1]
gi|166214784|sp|A2SFB6.1|CLPX_METPP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|124259261|gb|ABM94255.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylibium
petroleiphilum PM1]
Length = 423
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/291 (58%), Positives = 214/291 (73%), Gaps = 19/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP P EI LD++VIGQE AK+ L+VAVYNHYKR+ H V +
Sbjct: 65 DLPVPGEIKASLDQYVIGQEPAKRTLAVAVYNHYKRLKHVQ-------------GVGKKE 111
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 112 DVELAKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 171
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 172 QNCNYEVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 231
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ V
Sbjct: 232 GRKHPNQDFLQIDTTNILFICGGAFDGLEKVIQNRSEKSGIGFGASVQSKTERKV----- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S + VE DLI +GLIPE VGR P++ +L LTED +V++LTEPKNAL
Sbjct: 287 -SEVFREVEPEDLIKFGLIPELVGRLPVVATLGELTEDAMVQILTEPKNAL 336
>gi|134302068|ref|YP_001122037.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis WY96-3418]
gi|421751882|ref|ZP_16188919.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis AS_713]
gi|421753737|ref|ZP_16190726.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 831]
gi|421757463|ref|ZP_16194343.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 80700103]
gi|421759320|ref|ZP_16196153.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 70102010]
gi|424674638|ref|ZP_18111554.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 70001275]
gi|134049845|gb|ABO46916.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis WY96-3418]
gi|409086419|gb|EKM86538.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 831]
gi|409086609|gb|EKM86725.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis AS_713]
gi|409091046|gb|EKM91051.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 70102010]
gi|409092551|gb|EKM92522.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 80700103]
gi|417434682|gb|EKT89624.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 70001275]
Length = 417
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/324 (54%), Positives = 221/324 (68%), Gaps = 25/324 (7%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRDGNICNECVSKCAEKIRSTGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL+KSNVLL+GPTGSGKTL A+TL
Sbjct: 82 VAVYNHYKRI-TSNLTK--------------DDDTELKKSNVLLIGPTGSGKTLFAQTLV 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT DILFICGGAF
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAG 246
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK I R SIGF A V + +D L++ +ES DL +GLIPE +GR P
Sbjct: 247 IEKVIKHRMDKVSIGFNADVIQQKNSLDSD-----KLMQKIESEDLTRFGLIPELIGRLP 301
Query: 527 ILVSLTALTEDQLVKVLTEPKNAL 550
I+ L L E+ LV++LTEPKNAL
Sbjct: 302 IVTVLNELKEEDLVRILTEPKNAL 325
>gi|120554757|ref|YP_959108.1| ATP-dependent protease ATP-binding subunit ClpX [Marinobacter
aquaeolei VT8]
gi|387813880|ref|YP_005429363.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|166214783|sp|A1U1Q2.1|CLPX_MARAV RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120324606|gb|ABM18921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Marinobacter
aquaeolei VT8]
gi|381338893|emb|CCG94940.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 427
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/290 (58%), Positives = 224/290 (77%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + L+++VIGQ++AK VLSVAVYNHYKR L+ G G +
Sbjct: 67 LPTPAEIRETLNEYVIGQDRAKVVLSVAVYNHYKR-----LRYGEGKS-----------D 110
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 VELGKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 170
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 230
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER + SSIGF A V++ D+ T
Sbjct: 231 RKHPQQEFLQVDTGNILFICGGAFAGLDKVIQERSERSSIGFSATVKSQ-----DDSKST 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++ VE+ DL+ +GLIPEFVGR P++ +LT L E+ LV++LTEPKNAL
Sbjct: 286 GDIIREVETEDLVKFGLIPEFVGRLPVVATLTELDEEALVQILTEPKNAL 335
>gi|110680062|ref|YP_683069.1| ATP-dependent protease ATP-binding subunit ClpX [Roseobacter
denitrificans OCh 114]
gi|123361806|sp|Q165G0.1|CLPX_ROSDO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|109456178|gb|ABG32383.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseobacter
denitrificans OCh 114]
Length = 421
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/301 (56%), Positives = 224/301 (74%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC LD +VIGQ AK+VLSVAV+NHYKR+ HA +KG
Sbjct: 52 TKASGLKATDGVPTPKDICAVLDDYVIGQAMAKRVLSVAVHNHYKRLNHA--QKGG---- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I+ R + S++GFGA VR N
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAARGKGSAMGFGADVRGN 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNA
Sbjct: 276 DDRGV------GEIFTDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTQPKNA 329
Query: 550 L 550
L
Sbjct: 330 L 330
>gi|347819078|ref|ZP_08872512.1| ATP-dependent protease ATP-binding subunit ClpX [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 421
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/304 (55%), Positives = 222/304 (73%), Gaps = 24/304 (7%)
Query: 247 GGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSG 306
GG R S DLPTP E+ LD +VIGQ+ AK+ L+VAVYNHYKR+ H + +
Sbjct: 55 GGPVREARS----DLPTPVELKHNLDNYVIGQDMAKRTLAVAVYNHYKRLRHKDRAR--- 107
Query: 307 AEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGY
Sbjct: 108 -----------KDDVELSKSNILLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGY 156
Query: 367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
VGEDVE+I+ KLL + VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK
Sbjct: 157 VGEDVENIVQKLLQSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLK 216
Query: 427 MLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV 486
++EGT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V
Sbjct: 217 LIEGTMASVPPQGGRKHPNQDFLQIDTTNILFICGGAFAGLEKIIENRTEASGIGFGASV 276
Query: 487 RANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEP 546
++ ++ +T+ + +E DLI YGLIPE VGR P++ +LT L+E LV++LTEP
Sbjct: 277 KSRLQRSLTE------VFAEIEPEDLIKYGLIPELVGRMPVVTALTELSEAALVQILTEP 330
Query: 547 KNAL 550
+NAL
Sbjct: 331 RNAL 334
>gi|115314707|ref|YP_763430.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica OSU18]
gi|115129606|gb|ABI82793.1| endopeptidase Clp [Francisella tularensis subsp. holarctica OSU18]
Length = 417
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/324 (54%), Positives = 222/324 (68%), Gaps = 25/324 (7%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRDGNICNECVSKCAEKIRSTGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL++SNVLL+GPTGSGKTL A+TLA
Sbjct: 82 VAVYNHYKRI-TSNLTK--------------DDDTELKRSNVLLIGPTGSGKTLFAQTLA 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTKAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT DILFICGGAF
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAG 246
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK I R SIGF A V + +D L++ +ES DL +GLIPE +GR P
Sbjct: 247 IEKVIKHRMDKVSIGFNADVIQQKNSLDSD-----KLMQKIESEDLTRFGLIPELIGRLP 301
Query: 527 ILVSLTALTEDQLVKVLTEPKNAL 550
I+ L L E+ LV++LTEPKNAL
Sbjct: 302 IVTVLNELKEEDLVRILTEPKNAL 325
>gi|62260894|gb|AAX77944.1| unknown protein [synthetic construct]
Length = 452
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/324 (54%), Positives = 222/324 (68%), Gaps = 25/324 (7%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 48 SGRDGNICNECVSKCAEKIRSTGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 107
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL+KSNVLL+GPTGSGKTL A+TLA
Sbjct: 108 VAVYNHYKRI-TSNLTK--------------DDDTELKKSNVLLIGPTGSGKTLFAQTLA 152
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 153 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 212
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT DILFICGGAF
Sbjct: 213 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAG 272
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK I R SIGF + V + +D L++ +ES DL +GLIPE +GR P
Sbjct: 273 IEKVIKHRMDKVSIGFNSDVIQQKNSLDSD-----KLMQKIESEDLTRFGLIPELIGRLP 327
Query: 527 ILVSLTALTEDQLVKVLTEPKNAL 550
I+ L L E+ LV++LTEPKNAL
Sbjct: 328 IVTVLNELKEEDLVRILTEPKNAL 351
>gi|425435288|ref|ZP_18815745.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9432]
gi|425452212|ref|ZP_18832030.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 7941]
gi|425458444|ref|ZP_18837932.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9808]
gi|389680217|emb|CCH91097.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9432]
gi|389766109|emb|CCI08184.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 7941]
gi|389822690|emb|CCI29605.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9808]
Length = 444
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 219/292 (75%), Gaps = 12/292 (4%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K G P +
Sbjct: 74 EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKAGGGSP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 245
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P +
Sbjct: 246 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDGQ----ASKDK 301
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
V + LL+ + DL+ +G+IPEFVGR P+L +L+ L E+ L+ +LT+P+NAL
Sbjct: 302 VAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNAL 353
>gi|332528100|ref|ZP_08404131.1| ATP-dependent protease ATP-binding subunit ClpX [Rubrivivax
benzoatilyticus JA2]
gi|332112671|gb|EGJ12464.1| ATP-dependent protease ATP-binding subunit ClpX [Rubrivivax
benzoatilyticus JA2]
Length = 423
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/291 (59%), Positives = 217/291 (74%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP P EI LD++VIGQ+ AK+ LSVAVYNHYKR+ H G+G + D
Sbjct: 65 DLPVPSEIKTSLDQYVIGQDVAKRTLSVAVYNHYKRLKHM----GAGGK----------D 110
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLA+ +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 EVELTKSNILLIGPTGSGKTLLAQTLAKLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 170
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 QNCNYDVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 230
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V + V+D
Sbjct: 231 GRKHPNQDFLQIDTTNILFICGGAFDGLEKVIQGRTEKSGIGFGATVHSKSEKRVSD--- 287
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE DLI +GLIPE VGR P++ +L LTED +V++LTEPKNAL
Sbjct: 288 ---LFREVEPEDLIKFGLIPELVGRLPVVATLGELTEDAMVQILTEPKNAL 335
>gi|329119329|ref|ZP_08248015.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
bacilliformis ATCC BAA-1200]
gi|327464474|gb|EGF10773.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
bacilliformis ATCC BAA-1200]
Length = 422
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 216/290 (74%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+P EI L+ VIGQE+AKK L+VAVYNHYKR+ H PK + DN
Sbjct: 60 LPSPAEIVANLNDHVIGQEQAKKALAVAVYNHYKRLRH----------PKAS------DN 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 104 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 164 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT +ILF+CGGAF LEK I +R + IGFGA V + + A
Sbjct: 224 RKHPNQDFIQVDTTNILFVCGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 278
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L E VE DLI +GLIPE +GR P++ +L L ED LV +LTEPKNAL
Sbjct: 279 SELFEIVEPEDLIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNAL 328
>gi|126741245|ref|ZP_01756924.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp.
SK209-2-6]
gi|126717650|gb|EBA14373.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp.
SK209-2-6]
Length = 422
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/301 (56%), Positives = 226/301 (75%), Gaps = 21/301 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +P+PK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA K GS
Sbjct: 52 TKASGLKATDGVPSPKDICEVLDDYVIGQAMAKRVLSVAVHNHYKRLNHAQ-KAGS---- 106
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 107 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + S++GFGA VR N
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAMGFGADVRDN 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT PKNA
Sbjct: 277 DDRGV------GEIFQDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTLPKNA 330
Query: 550 L 550
L
Sbjct: 331 L 331
>gi|407768975|ref|ZP_11116352.1| ATP-dependent protease ATP-binding subunit ClpX [Thalassospira
xiamenensis M-5 = DSM 17429]
gi|407287895|gb|EKF13374.1| ATP-dependent protease ATP-binding subunit ClpX [Thalassospira
xiamenensis M-5 = DSM 17429]
Length = 421
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/292 (57%), Positives = 225/292 (77%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P+EICK LD +VIGQ AKKVLSVAV+NHYKR++HA+ +++
Sbjct: 63 VPSPQEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLHHAS----------------KNED 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN++L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IELAKSNIMLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFI GGAF L+K IS+R + S+IGFGA VR+ + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFIVGGAFAGLDKVISQRGKGSAIGFGADVRSPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL+ +GLIPEF+GR P+L +L L ED LVK+LTEPKNAL
Sbjct: 282 ---EVLREVEPEDLLKFGLIPEFIGRLPVLATLEDLDEDALVKILTEPKNAL 330
>gi|390442512|ref|ZP_10230503.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
sp. T1-4]
gi|389834167|emb|CCI34629.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
sp. T1-4]
Length = 444
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 219/292 (75%), Gaps = 12/292 (4%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K G P +
Sbjct: 74 EQIPKPREIKKYLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKAGGGSP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 245
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P +
Sbjct: 246 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDGQ----ASKDK 301
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
V + LL+ + DL+ +G+IPEFVGR P+L +L+ L E+ L+ +LT+P+NAL
Sbjct: 302 VAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNAL 353
>gi|53719040|ref|YP_108026.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei K96243]
gi|52209454|emb|CAH35405.1| ATP-dependent Clp protease ATP-binding subunit [Burkholderia
pseudomallei K96243]
Length = 430
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 72 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 115
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 116 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 175
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 176 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 235
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 236 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 291
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 292 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 340
>gi|398805270|ref|ZP_10564249.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Polaromonas
sp. CF318]
gi|398092051|gb|EJL82473.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Polaromonas
sp. CF318]
Length = 421
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 216/291 (74%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE AK+ L+VAVYNHYKR+ H K D
Sbjct: 64 DLPTPLEIKGTLDGYVIGQEPAKRTLAVAVYNHYKRLRHKEKAK--------------KD 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELTKSNILLIGPTGSGKTLLAQTLARTLNVPFVMADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S +GFGA V++ +T+A
Sbjct: 230 GRKHPNQDFLQVDTTNILFICGGAFAGLEKVIENRTEASGMGFGATVKSKKSRTLTEA-- 287
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DLI +GLIPE VGR P++ +L L+ED LV++LTEPKNA+
Sbjct: 288 ----FKEVEPEDLIKFGLIPELVGRMPVVATLAELSEDALVQILTEPKNAV 334
>gi|440753637|ref|ZP_20932839.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Microcystis
aeruginosa TAIHU98]
gi|440173843|gb|ELP53212.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Microcystis
aeruginosa TAIHU98]
Length = 425
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 219/292 (75%), Gaps = 12/292 (4%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K G P +
Sbjct: 55 EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKAGGGSP--------E 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 107 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 167 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P +
Sbjct: 227 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDGQ----ASKDK 282
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
V + LL+ + DL+ +G+IPEFVGR P+L +L+ L E+ L+ +LT+P+NAL
Sbjct: 283 VAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNAL 334
>gi|372270958|ref|ZP_09507006.1| ATP-dependent protease ATP-binding subunit ClpX [Marinobacterium
stanieri S30]
Length = 424
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/292 (57%), Positives = 224/292 (76%), Gaps = 23/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP EI + LD +VIGQE+AK+VL+VAVYNHYKR+ KKG
Sbjct: 64 EHLPTPAEIKETLDDYVIGQERAKRVLAVAVYNHYKRLRFQ--KKG-------------- 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTGSGKTLLA+T+AR +NVPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 -DVELGKSNILLIGPTGSGKTLLAETMARLLNVPFTIADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQKCDYDVEKAQLGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF LEK I +R + SSIGF A V++ D +
Sbjct: 227 GGRKHPQQEFLQVDTSNILFICGGAFAGLEKLIRDRSERSSIGFSAVVKSK------DES 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L VE+ DL+ +GLIPEFVGR P++ +L+ L ED L+++LTEPKN+L
Sbjct: 281 RLSEVLHDVEAEDLVKFGLIPEFVGRLPMVATLSELDEDALIQILTEPKNSL 332
>gi|76581159|gb|ABA50634.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1710b]
Length = 466
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 108 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 151
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 152 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 211
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 212 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 271
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 272 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 327
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 328 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 376
>gi|238026974|ref|YP_002911205.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
glumae BGR1]
gi|237876168|gb|ACR28501.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
glumae BGR1]
Length = 423
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 EVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQERD------ 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 283 SGEVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>gi|253996689|ref|YP_003048753.1| ATP-dependent protease ATP-binding subunit ClpX [Methylotenera
mobilis JLW8]
gi|253983368|gb|ACT48226.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylotenera
mobilis JLW8]
Length = 426
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 219/290 (75%), Gaps = 16/290 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+EICK LD++VIGQ +AKK L+VAVYNHYKR+ H NL G D
Sbjct: 63 LPTPQEICKILDQYVIGQTQAKKNLAVAVYNHYKRLGHNNLANGG-----------QKDE 111
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 112 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVGEDVENIMQKLLQ 171
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++ E AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ ++P +G
Sbjct: 172 KCDYDTEKAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASIPPQGG 231
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + +Q+DT +ILFICGGAF LEK I R + IGFGA V++ D
Sbjct: 232 RKHPNQEFVQLDTTNILFICGGAFDGLEKVIRLRSEKGGIGFGAEVKSK-----ADVREV 286
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++L VE DLI +GLIPEF+GR P++ +L +L E L+ +LTEPKNAL
Sbjct: 287 GAVLRDVEPEDLIKFGLIPEFIGRLPVVATLESLDEAALMTILTEPKNAL 336
>gi|54297777|ref|YP_124146.1| ATP-dependent protease ATP-binding subunit ClpX [Legionella
pneumophila str. Paris]
gi|61211415|sp|Q5X452.1|CLPX_LEGPA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|53751562|emb|CAH12980.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
pneumophila str. Paris]
Length = 424
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 220/290 (75%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI LD++VIGQ+ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 63 LPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS-----------------EDG 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 KCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER SSIGF A +++ + D A
Sbjct: 226 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKS--KKSSNDEA-- 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L +ES DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL
Sbjct: 282 SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNAL 331
>gi|110633523|ref|YP_673731.1| ATP-dependent protease ATP-binding subunit ClpX [Chelativorans sp.
BNC1]
gi|123162493|sp|Q11J59.1|CLPX_MESSB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|110284507|gb|ABG62566.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Chelativorans
sp. BNC1]
Length = 424
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/294 (59%), Positives = 223/294 (75%), Gaps = 26/294 (8%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI + LD +VIGQ AK+VLSVAV+NHYKR+ HA G A
Sbjct: 63 EGVPTPQEIMEVLDDYVIGQTYAKRVLSVAVHNHYKRLAHA----GKNA----------- 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 -DVELSKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTD 496
G RKHP+ + +Q+DT ILFICGGAF LEK IS+R + +SIGFGA V + + RAG
Sbjct: 227 GGRKHPQQEFLQVDTSSILFICGGAFAGLEKIISDRGKKTSIGFGASVSSPEDRRAG--- 283
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DL+ +GLIPEFVGR PIL +L L E+ LV++LTEPKNAL
Sbjct: 284 -----ELLRQVEPEDLLKFGLIPEFVGRLPILATLEDLDEEALVQILTEPKNAL 332
>gi|27380054|ref|NP_771583.1| ATP-dependent protease ATP-binding subunit ClpX [Bradyrhizobium
japonicum USDA 110]
gi|421598922|ref|ZP_16042240.1| ATP-dependent protease ATP-binding subunit ClpX [Bradyrhizobium sp.
CCGE-LA001]
gi|46576546|sp|Q89KG2.1|CLPX_BRAJA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|27353208|dbj|BAC50208.1| ATP-dependent Clp protease ATP-binding subunit [Bradyrhizobium
japonicum USDA 110]
gi|404268967|gb|EJZ33329.1| ATP-dependent protease ATP-binding subunit ClpX [Bradyrhizobium sp.
CCGE-LA001]
Length = 423
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/292 (58%), Positives = 218/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGFGA V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFGAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LTEPKNAL
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDETSLKKILTEPKNAL 330
>gi|399018229|ref|ZP_10720413.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Herbaspirillum sp. CF444]
gi|398101865|gb|EJL92065.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Herbaspirillum sp. CF444]
Length = 421
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 217/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+EI + LD++VIGQ+ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 DLPTPQEISELLDQYVIGQQTAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +I+FICGGAF L K ISER + S IGFGA V++ +
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKIISERSEKSGIGFGANVKSQTQ------KT 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L E DL+ +GLIPE VGR P++ +L L E+ L+++L EPKNAL
Sbjct: 282 ASEVLLHAEPDDLVKFGLIPELVGRLPVIATLNELNEEALIQILLEPKNAL 332
>gi|163746711|ref|ZP_02154068.1| ATP-dependent protease ATP-binding subunit [Oceanibulbus indolifex
HEL-45]
gi|161379825|gb|EDQ04237.1| ATP-dependent protease ATP-binding subunit [Oceanibulbus indolifex
HEL-45]
Length = 422
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/301 (56%), Positives = 224/301 (74%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP++IC LD +VIGQ AK+VLSVAV+NHYKR+ HA +KG
Sbjct: 52 TKASGLKATDGVPTPRDICGVLDDYVIGQAMAKRVLSVAVHNHYKRLNHA--QKGG---- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I+ R + S++GFGA VR N
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAARGKGSAMGFGADVRDN 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
DA + +E DL+ +GLIPEFVGR P+L +L L ED LV +LTEPKNA
Sbjct: 276 ------DARGIGEIFTDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTEPKNA 329
Query: 550 L 550
L
Sbjct: 330 L 330
>gi|126441050|ref|YP_001059355.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 668]
gi|126452859|ref|YP_001066626.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1106a]
gi|134277221|ref|ZP_01763936.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 305]
gi|162210030|ref|YP_333873.2| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1710b]
gi|167719123|ref|ZP_02402359.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei DM98]
gi|167738117|ref|ZP_02410891.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei 14]
gi|167815309|ref|ZP_02446989.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei 91]
gi|167823711|ref|ZP_02455182.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei 9]
gi|167836266|ref|ZP_02463149.1| ATP-dependent protease ATP-binding subunit [Burkholderia
thailandensis MSMB43]
gi|167845262|ref|ZP_02470770.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei B7210]
gi|167893806|ref|ZP_02481208.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei 7894]
gi|167902258|ref|ZP_02489463.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei NCTC 13177]
gi|167910497|ref|ZP_02497588.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei 112]
gi|167918526|ref|ZP_02505617.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei BCC215]
gi|217421598|ref|ZP_03453102.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 576]
gi|226197310|ref|ZP_03792887.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei Pakistan 9]
gi|237812683|ref|YP_002897134.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei MSHR346]
gi|242316368|ref|ZP_04815384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1106b]
gi|254179428|ref|ZP_04886027.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1655]
gi|254189183|ref|ZP_04895694.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei Pasteur 52237]
gi|254197477|ref|ZP_04903899.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei S13]
gi|254260834|ref|ZP_04951888.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1710a]
gi|254297313|ref|ZP_04964766.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 406e]
gi|386861424|ref|YP_006274373.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1026b]
gi|403519054|ref|YP_006653188.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei BPC006]
gi|418382822|ref|ZP_12966748.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 354a]
gi|418533695|ref|ZP_13099554.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1026a]
gi|418540565|ref|ZP_13106095.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1258a]
gi|418546809|ref|ZP_13112000.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1258b]
gi|418553029|ref|ZP_13117870.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 354e]
gi|424903789|ref|ZP_18327302.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
thailandensis MSMB43]
gi|61211439|sp|Q63V40.2|CLPX_BURPS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214765|sp|A3NWA5.1|CLPX_BURP0 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214766|sp|A3NAI4.1|CLPX_BURP6 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|126220543|gb|ABN84049.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 668]
gi|126226501|gb|ABN90041.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1106a]
gi|134250871|gb|EBA50950.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 305]
gi|157806801|gb|EDO83971.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 406e]
gi|157936862|gb|EDO92532.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei Pasteur 52237]
gi|169654218|gb|EDS86911.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei S13]
gi|184209968|gb|EDU07011.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1655]
gi|217395340|gb|EEC35358.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 576]
gi|225930689|gb|EEH26699.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei Pakistan 9]
gi|237506116|gb|ACQ98434.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei MSHR346]
gi|242139607|gb|EES26009.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1106b]
gi|254219523|gb|EET08907.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1710a]
gi|385360655|gb|EIF66569.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1026a]
gi|385361175|gb|EIF67067.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1258a]
gi|385362935|gb|EIF68725.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1258b]
gi|385372145|gb|EIF77270.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 354e]
gi|385376977|gb|EIF81605.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 354a]
gi|385658552|gb|AFI65975.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1026b]
gi|390931662|gb|EIP89063.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
thailandensis MSMB43]
gi|403074697|gb|AFR16277.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei BPC006]
Length = 423
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>gi|119898361|ref|YP_933574.1| ATP-dependent protease ATP-binding subunit ClpX [Azoarcus sp. BH72]
gi|166214754|sp|A1K782.1|CLPX_AZOSB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|119670774|emb|CAL94687.1| ATP-dependent Clp protease ATP-binding subunit [Azoarcus sp. BH72]
Length = 422
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 218/290 (75%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EIC+ LD++VIGQ +AK+ LSVAVYNHYKR+ H SG + D
Sbjct: 64 LPTPHEICQILDQYVIGQAQAKRNLSVAVYNHYKRLRHL-----SGRQ----------DE 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI ++P +G
Sbjct: 169 KCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASIPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT ++LFICGGAF L+K I R + IGFGA V++ +T+
Sbjct: 229 RKHPNQDFIQVDTTNVLFICGGAFDGLDKVIRNRTEKMGIGFGAEVKSRQGKNLTET--- 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
VE DL+ +GLIPEFVGR P++ +L L ED L+++L EPKNAL
Sbjct: 286 ---FRQVEPEDLVKFGLIPEFVGRLPVVATLQELDEDALIQILIEPKNAL 332
>gi|167586933|ref|ZP_02379321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
ubonensis Bu]
Length = 423
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>gi|394987651|ref|ZP_10380490.1| ATP-dependent protease ATP-binding subunit ClpX [Sulfuricella
denitrificans skB26]
gi|393792870|dbj|GAB70129.1| ATP-dependent protease ATP-binding subunit ClpX [Sulfuricella
denitrificans skB26]
Length = 421
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 226/304 (74%), Gaps = 24/304 (7%)
Query: 247 GGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSG 306
G S GG++ DLP P+EIC+ LD++VI Q KAKK+LSVAVYNHYKR+ +++
Sbjct: 52 GDQSAKGGAS---DLPVPQEICQMLDEYVIDQPKAKKILSVAVYNHYKRLKNSS------ 102
Query: 307 AEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
KT D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGY
Sbjct: 103 ---KT-------DEVELSKSNILLIGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGY 152
Query: 367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
VGEDVE+I+ KLL + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK
Sbjct: 153 VGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLK 212
Query: 427 MLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV 486
++EGT +VP +G RKHP + +Q+DT +ILFICGGAF L+K I R + IGFGA V
Sbjct: 213 LIEGTTASVPPQGGRKHPNQEFVQIDTTNILFICGGAFSGLDKVIRMRSEKGGIGFGAEV 272
Query: 487 RANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEP 546
++ D ++L VE DLI +GLIPEFVGR P++ +L L E L+++LTEP
Sbjct: 273 KSK-----DDRKEIGAVLRDVEPEDLIKFGLIPEFVGRLPVIATLEDLDEHALMRILTEP 327
Query: 547 KNAL 550
KNAL
Sbjct: 328 KNAL 331
>gi|182679146|ref|YP_001833292.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Beijerinckia
indica subsp. indica ATCC 9039]
gi|238691227|sp|B2IGP2.1|CLPX_BEII9 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|182635029|gb|ACB95803.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Beijerinckia
indica subsp. indica ATCC 9039]
Length = 421
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 220/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ +AK+VLSVAV+NHYKR+ HA ++
Sbjct: 63 IPTPREICKVLDDYVIGQPQAKRVLSVAVHNHYKRLNHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISTRGKTTSIGFAASVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ +GLIPEFVGR P++ +L L E+ L K+LTEPKNAL
Sbjct: 281 GEIFRKVEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALKKILTEPKNAL 330
>gi|241764197|ref|ZP_04762231.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidovorax
delafieldii 2AN]
gi|241366474|gb|EER60978.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidovorax
delafieldii 2AN]
Length = 421
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 218/291 (74%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQ++AK+ L+VAVYNHYKR+ H + + D
Sbjct: 64 DLPTPVEIKANLDNYVIGQDQAKRTLAVAVYNHYKRLRHKDKA--------------HKD 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGASVKSKKQRSLTE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +E DLI +GLIPE VGR P++ +L L+ED LV++LTEPKNAL
Sbjct: 287 ---VFTEIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTEPKNAL 334
>gi|167562415|ref|ZP_02355331.1| ATP-dependent protease ATP-binding subunit [Burkholderia
oklahomensis EO147]
gi|167569598|ref|ZP_02362472.1| ATP-dependent protease ATP-binding subunit [Burkholderia
oklahomensis C6786]
Length = 423
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>gi|430375835|ref|ZP_19430238.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella macacae
0408225]
gi|429541066|gb|ELA09094.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella macacae
0408225]
Length = 428
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 167/310 (53%), Positives = 224/310 (72%), Gaps = 12/310 (3%)
Query: 241 SSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHAN 300
S G W +LPTPK+I + LD++VIGQ++AKK L+VAVYNHYKR+ A+
Sbjct: 50 SHGEEAASYENWANR----ELPTPKQIREHLDEYVIGQDRAKKTLAVAVYNHYKRLKVAD 105
Query: 301 LKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATT 360
+ EPK +D +EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATT
Sbjct: 106 QFQN---EPKFVKTGADDAMIELSKSNILLIGPTGSGKTLLAQTLARLIDVPFAIADATT 162
Query: 361 LTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGV 420
LT+AGYVGEDVE+I+ KLL A++++E Q+G++YIDE+DKI++K E+++I+RDVSGEGV
Sbjct: 163 LTEAGYVGEDVENIVLKLLQSADYDIEKTQKGIIYIDEIDKISRKGENVSITRDVSGEGV 222
Query: 421 QQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSI 480
QQALLK++EGTI NVP +G RKHP + IQ+DT +IL ICGGAF L+K I +R + + I
Sbjct: 223 QQALLKLIEGTITNVPPQGGRKHPNQEMIQVDTSNILVICGGAFAGLDKVIQQRTEKTGI 282
Query: 481 GFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLV 540
GF A V+A + L + VE DLI +GLIPE +GR P++ +L L E+ L+
Sbjct: 283 GFNADVKAK-----DSSKKIGELFKQVEPEDLIKFGLIPELIGRLPVVATLEELDEESLI 337
Query: 541 KVLTEPKNAL 550
++LTEPKNAL
Sbjct: 338 QILTEPKNAL 347
>gi|17546431|ref|NP_519833.1| ATP-dependent protease ATP-binding subunit ClpX [Ralstonia
solanacearum GMI1000]
gi|21263463|sp|Q8XYP6.1|CLPX_RALSO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|17428729|emb|CAD15414.1| probable atp-dependent clp protease atp-binding subunit clpx
protein [Ralstonia solanacearum GMI1000]
Length = 424
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 169/301 (56%), Positives = 221/301 (73%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+ GG + DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K
Sbjct: 56 EKEGGLAVKSDLPTPHEIRQSLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK------- 108
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGE
Sbjct: 109 ---------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGE 159
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 160 DVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIE 219
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I++R S IGFGA V++
Sbjct: 220 GTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKIITQRSDKSGIGFGAEVKSK 279
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
V + +L VE DLI +GLIPE +GR P++ +L L E L+++L EPKNA
Sbjct: 280 EERDVNE------VLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMEILVEPKNA 333
Query: 550 L 550
+
Sbjct: 334 I 334
>gi|299066732|emb|CBJ37926.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Ralstonia solanacearum CMR15]
Length = 424
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 169/301 (56%), Positives = 221/301 (73%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+ GG + DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K
Sbjct: 56 EKEGGLAVKSDLPTPHEIRQSLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK------- 108
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGE
Sbjct: 109 ---------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGE 159
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 160 DVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIE 219
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I++R S IGFGA V++
Sbjct: 220 GTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKIITQRSDKSGIGFGAEVKSK 279
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
V + +L VE DLI +GLIPE +GR P++ +L L E L+++L EPKNA
Sbjct: 280 EERDVNE------VLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMEILVEPKNA 333
Query: 550 L 550
+
Sbjct: 334 I 334
>gi|254876857|ref|ZP_05249567.1| ATP-dependent protease ATP-binding subunit [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254842878|gb|EET21292.1| ATP-dependent protease ATP-binding subunit [Francisella
philomiragia subsp. philomiragia ATCC 25015]
Length = 417
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 171/292 (58%), Positives = 211/292 (72%), Gaps = 20/292 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LP P EI K LD ++IGQ+ AKKVLSVAVYNHYKRI K D
Sbjct: 54 EKLPKPIEIKKYLDDYIIGQDNAKKVLSVAVYNHYKRITSNTTK---------------D 98
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+ EL+KSNVLL+GPTGSGKTL A+TLA+ +NVPF IADATTLT+AGYVG+DVE+I+ +L
Sbjct: 99 DDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPFAIADATTLTEAGYVGDDVENIIVRL 158
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+F+V AQ+G++YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGT+ +VP K
Sbjct: 159 LQNADFDVAKAQKGIIYIDEIDKIARKSESASITRDVSGEGVQQALLKLIEGTVSSVPPK 218
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT DILFICGGAF +EK + R SIGF A V ++
Sbjct: 219 GGRKHPNQDMIQVDTSDILFICGGAFAGIEKVVKHRMDKVSIGFNADVIQQ-----KNSL 273
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T L++ VES DL +GLIPE +GR PI+ L L E+ LVK+LTEPKNAL
Sbjct: 274 DTEKLMQKVESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVKILTEPKNAL 325
>gi|312796429|ref|YP_004029351.1| ATP-dependent endopeptidase clp ATP-binding subunit clpX
[Burkholderia rhizoxinica HKI 454]
gi|312168204|emb|CBW75207.1| ATP-dependent endopeptidase clp ATP-binding subunit clpX
[Burkholderia rhizoxinica HKI 454]
Length = 410
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPLEIRQILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGASVKSKQD---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 285 --EVLRDVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>gi|262374980|ref|ZP_06068214.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
lwoffii SH145]
gi|262309993|gb|EEY91122.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
lwoffii SH145]
Length = 436
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 220/290 (75%), Gaps = 17/290 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ N K + DD+
Sbjct: 60 LPKPHEIRAALDQYVIGQDVAKKTLSVAVYNHYKRLKVQNNGKKA------------DDS 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELSKSNIMLVGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 168 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A VR +
Sbjct: 228 RKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTAEVRKK-----DETKKL 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 283 SDLFRQVEATDLVKFGLIPEFIGRLPVIATLDELDEEALMQILTEPKNAL 332
>gi|326795824|ref|YP_004313644.1| ATP-dependent Clp protease ATP-binding subunit clpX [Marinomonas
mediterranea MMB-1]
gi|326546588|gb|ADZ91808.1| ATP-dependent Clp protease ATP-binding subunit clpX [Marinomonas
mediterranea MMB-1]
Length = 427
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 165/292 (56%), Positives = 223/292 (76%), Gaps = 20/292 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LPTP ++ K LD +VIGQE+AKKVL+VAVYNHYKR+ H + K D
Sbjct: 66 DELPTPLKLSKSLDDYVIGQERAKKVLAVAVYNHYKRLRHQSSK---------------D 110
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 111 SPVELGKSNILLIGPTGSGKTLLAQTLARVLDVPFTIADATTLTEAGYVGEDVENIIQKL 170
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 171 LQNCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 230
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF LE+ IS+R + SSIGF A V++ +
Sbjct: 231 GGRKHPQQEFLQVDTSNILFICGGAFAGLERVISDRTEKSSIGFSATVKSK-----DEGR 285
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S + VE+ DL+ +GLIPEFVGR P++ +L+ L E+ L+ +L+EPKNAL
Sbjct: 286 TFSEAIHQVETEDLVKFGLIPEFVGRLPVVATLSELDEEALMTILSEPKNAL 337
>gi|350571079|ref|ZP_08939417.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
wadsworthii 9715]
gi|349793446|gb|EGZ47280.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
wadsworthii 9715]
Length = 455
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 172/312 (55%), Positives = 223/312 (71%), Gaps = 21/312 (6%)
Query: 239 GGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH 298
GGS G S L LPTP EI L+ VIGQ++AKK L+VAVYNHYKR+ H
Sbjct: 74 GGSEAPESGKVGPNKDSGLSNKLPTPAEIVANLNDHVIGQDQAKKALAVAVYNHYKRLRH 133
Query: 299 ANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADA 358
PK ++NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADA
Sbjct: 134 ----------PK------ENNNVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADA 177
Query: 359 TTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGE 418
TTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGE
Sbjct: 178 TTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGE 237
Query: 419 GVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS 478
GVQQALLK++EGT+ +VP +G RKHP + IQ+DT +ILFICGGAF LEK I +R +
Sbjct: 238 GVQQALLKLIEGTVASVPPQGGRKHPNQEFIQVDTTNILFICGGAFAGLEKVIRQRTEKG 297
Query: 479 SIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQ 538
IGFGA V + D + + L ++VE DLI +GLIPE +GR P++ +L L ED
Sbjct: 298 GIGFGAAVHSK-----DDDSKITELFQTVEPEDLIKFGLIPELIGRLPVIAALAELDEDA 352
Query: 539 LVKVLTEPKNAL 550
L+ +LTEPKNAL
Sbjct: 353 LINILTEPKNAL 364
>gi|259416323|ref|ZP_05740243.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Silicibacter
sp. TrichCH4B]
gi|259347762|gb|EEW59539.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Silicibacter
sp. TrichCH4B]
Length = 395
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 169/301 (56%), Positives = 225/301 (74%), Gaps = 21/301 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC LD +VIGQ AK+VLSVAV+NHYKR+ HA K G
Sbjct: 52 TKASGMKATDGVPTPKDICDVLDDYVIGQATAKRVLSVAVHNHYKRLNHAQ-KAG----- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ---------NDIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I +R + S++GFGA VR
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIKQRGKGSAMGFGADVRDE 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
AGV + + +E DL+ +GLIPEFVGR P+L +L L ED L+ +LT+PKNA
Sbjct: 277 SDAGVGET------FKDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKPKNA 330
Query: 550 L 550
L
Sbjct: 331 L 331
>gi|372279705|ref|ZP_09515741.1| ATP-dependent protease ATP-binding subunit ClpX [Oceanicola sp.
S124]
Length = 421
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 171/301 (56%), Positives = 223/301 (74%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +PTPKEIC LD +VIGQ AK+VLSVAV+NHYKR+ H+ KG
Sbjct: 52 TKSTGLKSSEGVPTPKEICAVLDDYVIGQATAKRVLSVAVHNHYKRLNHS--AKGG---- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQSSEYNVEKAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I+ R + S++GFGA VR N
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAARGKGSAMGFGADVRDN 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
DA + + +E DL+ +GLIPEFVGR P+L +L L + LV +LTEPKNA
Sbjct: 276 ------DARGVGEIFQDLEPEDLLKFGLIPEFVGRLPVLATLEDLDAEALVTILTEPKNA 329
Query: 550 L 550
L
Sbjct: 330 L 330
>gi|160898087|ref|YP_001563669.1| ATP-dependent protease ATP-binding subunit ClpX [Delftia
acidovorans SPH-1]
gi|333915638|ref|YP_004489370.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Delftia sp.
Cs1-4]
gi|238687212|sp|A9C1U9.1|CLPX_DELAS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|160363671|gb|ABX35284.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Delftia
acidovorans SPH-1]
gi|333745838|gb|AEF91015.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Delftia sp.
Cs1-4]
Length = 420
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 217/291 (74%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQ+ K+ L+VAVYNHYKR+ H + K G D
Sbjct: 63 DLPTPAEIKANLDNYVIGQDLPKRTLAVAVYNHYKRLRHKD-KAGK-------------D 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 EIELAKSNILLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
E++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QSCEYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ + +
Sbjct: 229 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGATVKSKKQRSI----- 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S + + +E DLI +G+IPE VGR P++ +L L ED LV++LTEPKNAL
Sbjct: 284 -SEVFQEIEPEDLIKFGIIPELVGRMPVVTALAELGEDALVQILTEPKNAL 333
>gi|365093544|ref|ZP_09330609.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax sp.
NO-1]
gi|363414424|gb|EHL21574.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax sp.
NO-1]
Length = 421
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 170/305 (55%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 246 GGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGS 305
G +R G S DLPTP EI LD +VIGQ+ AK+ L+VAVYNHYKR+ H +
Sbjct: 54 AGDLAREGRS----DLPTPAEIKTNLDNYVIGQDVAKRTLAVAVYNHYKRLRHKDKA--- 106
Query: 306 GAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAG 365
+ D+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AG
Sbjct: 107 -----------HKDDVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAG 155
Query: 366 YVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
YVGEDVE+I+ KLL + VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALL
Sbjct: 156 YVGEDVENIVQKLLQSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALL 215
Query: 426 KMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 485
K++EGT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA
Sbjct: 216 KLIEGTMASVPPQGGRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAS 275
Query: 486 VRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTE 545
V++ + +T+ + +E DLI +GLIPE VGR P++ +L L+ED LV++LTE
Sbjct: 276 VKSKKQRSLTE------VFTEIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTE 329
Query: 546 PKNAL 550
PKNAL
Sbjct: 330 PKNAL 334
>gi|52842085|ref|YP_095884.1| ATP-dependent protease ATP-binding subunit ClpX [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|378777720|ref|YP_005186158.1| ATP-dependent Clp protease, ATP binding subunit ClpX [Legionella
pneumophila subsp. pneumophila ATCC 43290]
gi|52629196|gb|AAU27937.1| ATP-dependent Clp protease, ATP binding subunit ClpX [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|364508535|gb|AEW52059.1| ATP-dependent Clp protease, ATP binding subunit ClpX [Legionella
pneumophila subsp. pneumophila ATCC 43290]
Length = 426
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 218/290 (75%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI LD++VIGQ+ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 65 LPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS-----------------EDG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 KCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER SSIGF A +++ +
Sbjct: 228 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSSNDE----V 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L +ES DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL
Sbjct: 284 SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNAL 333
>gi|445496994|ref|ZP_21463849.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Janthinobacterium sp. HH01]
gi|444786989|gb|ELX08537.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Janthinobacterium sp. HH01]
Length = 422
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD++VIGQ+ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 DLPTPHEIKDLLDQYVIGQQTAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
++EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DIELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QSCNYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +I+FICGGAF L K IS R + S IGF A V++ +D
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKVISNRSEKSGIGFSASVKSKKERSASDV-- 285
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LLE+ E DLI +GLIPE VGR P++ +L+ LTE+ L+++L EPKNAL
Sbjct: 286 ---LLEA-EPEDLIKFGLIPELVGRLPVVATLSELTEEALIQILVEPKNAL 332
>gi|383758646|ref|YP_005437631.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rubrivivax
gelatinosus IL144]
gi|381379315|dbj|BAL96132.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rubrivivax
gelatinosus IL144]
Length = 423
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 172/291 (59%), Positives = 215/291 (73%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP P EI LD++VIGQ+ AK+ LSVAVYNHYKR+ H G+G + D
Sbjct: 65 DLPVPSEIKTSLDQYVIGQDVAKRTLSVAVYNHYKRLKHM----GAGGK----------D 110
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 EVELTKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 170
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 QNCNYDVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 230
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKH D +Q+DT +ILFICGGAF LEK I R + S IGF A V + V+D
Sbjct: 231 GRKHSNQDFLQIDTTNILFICGGAFDGLEKVIQNRTEKSGIGFAATVHSKSEKKVSD--- 287
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE DLI +GLIPE VGR P++ +L LTED +V++LTEPKNAL
Sbjct: 288 ---LFREVEPEDLIKFGLIPELVGRLPVVATLGELTEDAMVQILTEPKNAL 335
>gi|389806652|ref|ZP_10203699.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
thiooxydans LCS2]
gi|388445304|gb|EIM01384.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
thiooxydans LCS2]
Length = 430
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 218/290 (75%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI + LD++V+GQ +AKK L+VAVYNHYKRI D+
Sbjct: 66 LPKPKEIRESLDQYVVGQTRAKKALAVAVYNHYKRIESRQ----------------KSDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQSGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTLASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DTK+ILFICGGAF LEK I +R +++SIGF A VR+ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLEKVIQQRSENTSIGFSAEVRSKER-----TENL 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE +DL+ +GLIPEFVGR P++ +L L E LVK+LTEPKNA+
Sbjct: 285 GKVLADVEPADLVRFGLIPEFVGRLPVVATLDELDEAALVKILTEPKNAV 334
>gi|89092955|ref|ZP_01165907.1| ATP-dependent protease ATP-binding subunit, partial [Neptuniibacter
caesariensis]
gi|89082980|gb|EAR62200.1| ATP-dependent protease ATP-binding subunit [Oceanospirillum sp.
MED92]
Length = 416
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 170/294 (57%), Positives = 225/294 (76%), Gaps = 22/294 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI-YHANLKKGSGAEPKTAAAVD 316
G+ LPTP E+ LD++VIGQE+AKKVL+VAVYNHYKR+ + N K G
Sbjct: 52 GDHLPTPAELSAALDEYVIGQERAKKVLAVAVYNHYKRLRFQKNDKSG------------ 99
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 100 ----VELGKSNILLIGPTGSGKTLLAQTLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 155
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 156 KLLQKCDYDVEKAQLGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 215
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHP+ + +Q+DT +ILFICGGAF LE+ I +R + SSIGF A V++ +
Sbjct: 216 PQGGRKHPQQEFLQVDTSNILFICGGAFAGLEQIIRDRSEKSSIGFSAVVKSKDE----E 271
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
V+ SL E +E+ DL+ YGLIPEFVGR P++ +L L E+ LV++LTEPKN+L
Sbjct: 272 KTVSDSLTE-LEAEDLVKYGLIPEFVGRLPMIATLAELDEEALVQILTEPKNSL 324
>gi|61211423|sp|Q5ZUE0.2|CLPX_LEGPH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
Length = 424
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 218/290 (75%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI LD++VIGQ+ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 63 LPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS-----------------EDG 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 KCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER SSIGF A +++ +
Sbjct: 226 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSSNDE----V 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L +ES DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL
Sbjct: 282 SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNAL 331
>gi|428201397|ref|YP_007079986.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pleurocapsa
sp. PCC 7327]
gi|427978829|gb|AFY76429.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pleurocapsa
sp. PCC 7327]
Length = 447
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 169/290 (58%), Positives = 220/290 (75%), Gaps = 15/290 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P+EI K LD++VIGQ+ AKK+LSVAVYNHYKR+ + +K SG DD
Sbjct: 82 IPKPREIKKYLDEYVIGQDDAKKILSVAVYNHYKRLSVSQARK-SGI---------IDDP 131
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +LL
Sbjct: 132 VELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQ 191
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +G
Sbjct: 192 VADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQGG 251
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT +ILFICGGAFV L+K + +R S+GF P G + T
Sbjct: 252 RKHPYQDCIQIDTSNILFICGGAFVGLDKMVEQRLGKKSMGFVRP-----GEGTSKEKRT 306
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ LL+ +E DL+ YG+IPEFVGR P++ SL L E+ LV +LT+P+NAL
Sbjct: 307 ADLLKQLEPDDLVKYGMIPEFVGRIPVMASLDPLDEETLVAILTQPRNAL 356
>gi|71907347|ref|YP_284934.1| ATP-dependent protease ATP-binding subunit ClpX [Dechloromonas
aromatica RCB]
gi|123774411|sp|Q47FB7.1|CLPX_DECAR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|71846968|gb|AAZ46464.1| ClpX, ATPase regulatory subunit [Dechloromonas aromatica RCB]
Length = 420
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 214/291 (73%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+EI LD++VIGQE AK++LSVAVYNHYKR+ H N
Sbjct: 60 DLPTPREISSILDQYVIGQEVAKRILSVAVYNHYKRLRHT---------------AKNAG 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLL 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT ++P +G
Sbjct: 165 QKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASIPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + IGFGA V++ D
Sbjct: 225 GRKHPNQDFVQVDTTNILFICGGAFAGLEKVIQSRSERGGIGFGAEVKSK-----DDGKA 279
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L E DLI +GLIPE +GR P++ +L L E LV++LTEPKNAL
Sbjct: 280 VGKILLDAEPEDLIKFGLIPELIGRLPVVATLQELEESALVQILTEPKNAL 330
>gi|363890988|ref|ZP_09318282.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Eubacteriaceae
bacterium CM5]
gi|361962755|gb|EHL15864.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Eubacteriaceae
bacterium CM5]
Length = 417
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 170/298 (57%), Positives = 226/298 (75%), Gaps = 25/298 (8%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
S+ DLP PKEI LD ++IGQE AKKVLSV++YNHYKRIYHA+ KKG+ E
Sbjct: 55 SSTSNDLPKPKEIKDFLDDYIIGQEAAKKVLSVSLYNHYKRIYHAD-KKGNKTE------ 107
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
L+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF IADATTLT+AGYVGEDVE+I
Sbjct: 108 --------LQKSNILLLGPTGSGKTLLAQTLAKIMDVPFAIADATTLTEAGYVGEDVENI 159
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
L KL+ A+FN+E AQ+G+VYIDE+DKIT+K+E+++I+RDVSGEGVQQALLK++EGT+ N
Sbjct: 160 LLKLIQAADFNIEKAQKGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKIIEGTLAN 219
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV--RANMRA 492
VP +G RKHP + IQ+DT +I+FI GGAF +++ + +R + +GFG+ V + M+
Sbjct: 220 VPPQGGRKHPNQELIQIDTTNIMFIVGGAFEGIDEIVRKRLGKNVVGFGSKVISKDTMKI 279
Query: 493 GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
G + ++V++ DL+ YGLIPEFVGR PI+VSL L E+ LVK+L EPKN+L
Sbjct: 280 G--------EIYKNVQTEDLLKYGLIPEFVGRLPIVVSLDPLDEEALVKILKEPKNSL 329
>gi|126727091|ref|ZP_01742928.1| ATP-dependent protease ATP-binding subunit [Rhodobacterales
bacterium HTCC2150]
gi|126703519|gb|EBA02615.1| ATP-dependent protease ATP-binding subunit [Rhodobacterales
bacterium HTCC2150]
Length = 423
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 169/301 (56%), Positives = 226/301 (75%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPKEIC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA G G+E
Sbjct: 52 TKASGLKATDGVPTPKEICEVLDDYVIGQGHAKRVLSVAVHNHYKRLNHA----GKGSE- 106
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+EL KSN++L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 107 -----------IELAKSNIMLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILF+CGGAF L+K I++R + SSIGFGA VR
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFVCGGAFAGLDKIIAQRGKGSSIGFGADVRDE 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
G+ + L+ +E DL+ +GLIPEFVGR P++ +L L D LV +L+EPKNA
Sbjct: 276 ATKGIGET------LKDLEPEDLLKFGLIPEFVGRLPVIATLEDLDLDALVTILSEPKNA 329
Query: 550 L 550
L
Sbjct: 330 L 330
>gi|330817270|ref|YP_004360975.1| ATP-dependent protease ATP-binding subunit [Burkholderia gladioli
BSR3]
gi|327369663|gb|AEA61019.1| ATP-dependent protease ATP-binding subunit [Burkholderia gladioli
BSR3]
Length = 423
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 EVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGASVKSKQERD------ 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 283 SGEVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>gi|406937070|gb|EKD70637.1| hypothetical protein ACD_46C00464G0003 [uncultured bacterium]
Length = 428
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 169/290 (58%), Positives = 213/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD++VIGQ +AKKVLSVAVYNHYKR+ + D
Sbjct: 69 LPTPTEIRTTLDEYVIGQTQAKKVLSVAVYNHYKRLRNHT----------------KQDE 112
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTL+A+TLAR +NVPFVIADATTLT+AGYVGEDVESI+ KLL
Sbjct: 113 IELNKSNILLIGPTGSGKTLMAETLARLLNVPFVIADATTLTEAGYVGEDVESIIQKLLQ 172
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ E++V AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 173 RCEYDVSKAQMGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 232
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT++ILF+CGGAF LEK I +R + S IGF A + G DA
Sbjct: 233 RKHPQQEFIQVDTRNILFVCGGAFAGLEKIIRDRSEKSGIGFSAEIH-----GKDDAKTI 287
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S LL E +DLI YGLIPE +GR P++ +L L + LV +L EPKNAL
Sbjct: 288 SDLLREAEPADLIKYGLIPELIGRLPVVATLEELDKQALVSILIEPKNAL 337
>gi|307610563|emb|CBX00151.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
pneumophila 130b]
Length = 424
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 218/290 (75%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI LD++VIGQ+ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 63 LPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS-----------------EDG 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 KCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER SSIGF A +++ +
Sbjct: 226 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSSNDE----V 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L +ES DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL
Sbjct: 282 SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNAL 331
>gi|307151648|ref|YP_003887032.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cyanothece sp.
PCC 7822]
gi|306981876|gb|ADN13757.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. PCC 7822]
Length = 446
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 221/291 (75%), Gaps = 15/291 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKK-GSGAEPKTAAAVDNDD 319
+P P+EI K LD++VIGQ +AKKVLSVAVYNHYKR+ K+ G+G+ DD
Sbjct: 79 IPKPREIKKYLDEYVIGQNEAKKVLSVAVYNHYKRLSDIQSKRSGTGS---------IDD 129
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+EL+KSN+LLMGPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +LL
Sbjct: 130 PIELQKSNILLMGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLL 189
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +G
Sbjct: 190 QVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVPPQG 249
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAFV L+K + +R S+GF P N +
Sbjct: 250 GRKHPYQDCIQIDTSNILFICGGAFVGLDKIVEQRLGKKSMGFIQPGDGNAK-----DKR 304
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T+ LL+ +E DL+ +G+IPEFVGR P++ SL L E+ L+ +LT+P+NAL
Sbjct: 305 TADLLKVIEPDDLVKFGMIPEFVGRIPVMASLDPLDEEALIAILTQPRNAL 355
>gi|220934116|ref|YP_002513015.1| ATP-dependent protease ATP-binding subunit ClpX [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|254763871|sp|B8GNT9.1|CLPX_THISH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|219995426|gb|ACL72028.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 425
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 171/297 (57%), Positives = 220/297 (74%), Gaps = 21/297 (7%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
G+ +G+ LP P EI K LD++VIGQ++AKK+L+VAVYNHYKR+ N K
Sbjct: 58 GAAVGDKLPKPHEIKKILDEYVIGQDRAKKILAVAVYNHYKRLEARNSK----------- 106
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+
Sbjct: 107 -----DEVELAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVEN 161
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
I+ KLL + +++VE AQ G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGTI
Sbjct: 162 IIQKLLQKCDYDVEKAQTGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTIA 221
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 493
+VP +G RKHP+ + +Q+DT +ILFI GGAF L+K I +R + IGF A V++ G
Sbjct: 222 SVPPQGGRKHPQQEFLQVDTHNILFIVGGAFAGLDKVIRDRTEKGGIGFSAKVKSKEEKG 281
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE DLI YGLIPEFVGR P++ +L L ED L+++LTEPKNAL
Sbjct: 282 -----PVSRTLSGVEPEDLIKYGLIPEFVGRLPVVATLEELDEDALIQILTEPKNAL 333
>gi|410662926|ref|YP_006915297.1| ATP-dependent protease ATP-binding subunit ClpX [Simiduia
agarivorans SA1 = DSM 21679]
gi|409025283|gb|AFU97567.1| ATP-dependent protease ATP-binding subunit ClpX [Simiduia
agarivorans SA1 = DSM 21679]
Length = 432
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 221/290 (76%), Gaps = 17/290 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+EI + LD++VIGQ+ AKKVL+VAVYNHYKR+ ++ K G EP
Sbjct: 67 LPTPQEISETLDQYVIGQKVAKKVLAVAVYNHYKRLRTSD-KGGKDKEP----------- 114
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 115 VELGKSNILLVGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 174
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 175 KCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 234
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I +R + IGFGA V++ D
Sbjct: 235 RKHPQQEFLQVDTANILFICGGAFAGLDKVIRDRSEKGGIGFGAEVKSK-----DDKRNV 289
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL+ YGLIPEF+GR P++ +L L +D L+ +LTEP+NAL
Sbjct: 290 GEVLRDVEPEDLVRYGLIPEFIGRLPVIATLEELDKDALITILTEPRNAL 339
>gi|329908484|ref|ZP_08274874.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Oxalobacteraceae bacterium IMCC9480]
gi|327546711|gb|EGF31662.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Oxalobacteraceae bacterium IMCC9480]
Length = 422
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 222/291 (76%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP+EIC+ L ++VIGQ+ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 ELPTPQEICELLGQYVIGQDGAKRILSVAVYNHYKRLRHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QACNYDVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +I+FICGGAF L K +S R + S IGF A V++ ++ +
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKIVSNRSEKSGIGFSASVKSQ-----SERSA 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ LLE+ E DLI +GLIPE VGR P++ +L+ LTED ++++L EPKNAL
Sbjct: 283 SEMLLEA-EPEDLIKFGLIPELVGRLPVVATLSELTEDAMIQILLEPKNAL 332
>gi|54294747|ref|YP_127162.1| ATP-dependent protease ATP-binding subunit ClpX [Legionella
pneumophila str. Lens]
gi|148359405|ref|YP_001250612.1| ATP-dependent Clp protease ATP binding subunit ClpX [Legionella
pneumophila str. Corby]
gi|296107451|ref|YP_003619151.1| 3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
[Legionella pneumophila 2300/99 Alcoy]
gi|397667588|ref|YP_006509125.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Legionella pneumophila subsp. pneumophila]
gi|61211413|sp|Q5WVJ1.1|CLPX_LEGPL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214781|sp|A5ID16.1|CLPX_LEGPC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|53754579|emb|CAH16063.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
pneumophila str. Lens]
gi|148281178|gb|ABQ55266.1| ATP-dependent Clp protease, ATP binding subunit ClpX [Legionella
pneumophila str. Corby]
gi|295649352|gb|ADG25199.1| 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
[Legionella pneumophila 2300/99 Alcoy]
gi|395130999|emb|CCD09248.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Legionella pneumophila subsp. pneumophila]
Length = 424
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 218/290 (75%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI LD++VIGQ+ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 63 LPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS-----------------EDG 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 KCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER SSIGF A +++ +
Sbjct: 226 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSSNDE----V 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L +ES DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL
Sbjct: 282 SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNAL 331
>gi|389690969|ref|ZP_10179862.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Microvirga
sp. WSM3557]
gi|388589212|gb|EIM29501.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Microvirga
sp. WSM3557]
Length = 422
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 220/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQE AKKVLSVAV+NHYKR+ HA ++
Sbjct: 63 VPTPKEISRVLDDYVIGQEHAKKVLSVAVHNHYKRLAHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGKGTSIGFGATVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ SVE DL+ +GLIPEFVGR P+L +L L E+ L K+L EPKNAL
Sbjct: 281 GEIFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALKKILQEPKNAL 330
>gi|330503118|ref|YP_004379987.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mendocina NK-01]
gi|328917404|gb|AEB58235.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mendocina NK-01]
Length = 426
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 171/290 (58%), Positives = 216/290 (74%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKKVLSVAVYNHYKR+ D D+
Sbjct: 65 LPAPKEISAILDQYVIGQERAKKVLSVAVYNHYKRLNQR----------------DKKDD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ +
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFAGLEKVIQARSTKGGIGFGAEVRSKQEG----KKIG 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P++ +L L E LV++LTEPKNAL
Sbjct: 285 ESLRE-VEPDDLVKFGLIPEFVGRLPVIATLEELDEAALVQILTEPKNAL 333
>gi|352085687|ref|ZP_08953278.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodanobacter
sp. 2APBS1]
gi|389798003|ref|ZP_10201031.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter sp.
116-2]
gi|351681628|gb|EHA64752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodanobacter
sp. 2APBS1]
gi|388445898|gb|EIM01951.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter sp.
116-2]
Length = 430
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 218/290 (75%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI + LD++V+GQ +AKK L+VAVYNHYKRI D+
Sbjct: 66 LPKPKEIRESLDQYVVGQTRAKKALAVAVYNHYKRIESRQ----------------KSDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQSGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTLASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DTK+ILFICGGAF LEK I +R +++SIGF A VR+ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLEKVIQQRSENTSIGFSAEVRSKER-----TENL 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE +DL+ +GLIPEFVGR P++ +L L E LVK+LTEPKNA+
Sbjct: 285 GKVLADVEPADLVRFGLIPEFVGRLPVVATLDELDEAALVKILTEPKNAV 334
>gi|146307079|ref|YP_001187544.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mendocina ymp]
gi|421501786|ref|ZP_15948743.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mendocina DLHK]
gi|166214806|sp|A4XTZ6.1|CLPX_PSEMY RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|145575280|gb|ABP84812.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
mendocina ymp]
gi|400347529|gb|EJO95882.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mendocina DLHK]
Length = 426
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 171/290 (58%), Positives = 216/290 (74%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKKVLSVAVYNHYKR+ D D+
Sbjct: 65 LPAPKEISAILDQYVIGQERAKKVLSVAVYNHYKRLNQR----------------DKKDD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ +
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFAGLEKVIQARSTKGGIGFGAEVRSKQEG----KKIG 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P++ +L L E LV++LTEPKNAL
Sbjct: 285 ESLRE-VEPDDLVKFGLIPEFVGRLPVIATLEELDEAALVQILTEPKNAL 333
>gi|254488366|ref|ZP_05101571.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseobacter
sp. GAI101]
gi|214045235|gb|EEB85873.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseobacter
sp. GAI101]
Length = 421
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 170/301 (56%), Positives = 223/301 (74%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC LD +VIGQ AKKVLSVAV+NHYKR+ HA +KG
Sbjct: 52 TKASGLKATDGVPTPKDICDVLDDYVIGQAMAKKVLSVAVHNHYKRLNHA--QKGG---- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I+ R + S++GFGA VR
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAARGKGSAMGFGADVRDK 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
DA + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNA
Sbjct: 276 ------DARGIGEIFTDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTQPKNA 329
Query: 550 L 550
L
Sbjct: 330 L 330
>gi|237745592|ref|ZP_04576072.1| ATP-dependent protease ATP-binding subunit [Oxalobacter formigenes
HOxBLS]
gi|229376943|gb|EEO27034.1| ATP-dependent protease ATP-binding subunit [Oxalobacter formigenes
HOxBLS]
Length = 423
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 170/298 (57%), Positives = 225/298 (75%), Gaps = 23/298 (7%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
G G +LPTPKEIC LD++VIGQE+AKK+LSVAVYNHYKR+ + K
Sbjct: 58 GKEKGGELPTPKEICNLLDQYVIGQEQAKKILSVAVYNHYKRLKYYGGK----------- 106
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
+D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+
Sbjct: 107 ----NDDVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVEN 162
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
I+ KLL +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 163 IIQKLLQNCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMA 222
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA-NMRA 492
++P +G RKHP D IQ+DT +I+FICGGAF L K I+ R + IGF A V++ + +A
Sbjct: 223 SIPPQGGRKHPNQDFIQVDTSNIMFICGGAFDGLSKIIANRSEKGGIGFSAAVKSPSEKA 282
Query: 493 GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
G S +L +VE DLI +GLIPE +GR P++ L LTE+ L+++L +PKNAL
Sbjct: 283 G-------SEMLLNVEPEDLIKFGLIPELIGRLPVVAVLNDLTENALIEILVKPKNAL 333
>gi|365888481|ref|ZP_09427243.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. STM 3809]
gi|365335846|emb|CCD99774.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. STM 3809]
Length = 380
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 171/292 (58%), Positives = 217/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H +
Sbjct: 19 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHSD 62
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 63 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 122
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 123 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 182
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 183 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 237
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LTEPKNAL
Sbjct: 238 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNAL 286
>gi|351729534|ref|ZP_08947225.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax radicis
N35]
Length = 421
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 170/305 (55%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 246 GGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGS 305
G +R G S DLPTP EI LD +VIGQ+ AK+ L+VAVYNHYKR+ H +
Sbjct: 54 AGDLAREGRS----DLPTPVEIKTNLDNYVIGQDVAKRTLAVAVYNHYKRLRHKDKA--- 106
Query: 306 GAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAG 365
+ D+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AG
Sbjct: 107 -----------HKDDVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAG 155
Query: 366 YVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
YVGEDVE+I+ KLL + VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALL
Sbjct: 156 YVGEDVENIVQKLLQSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALL 215
Query: 426 KMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 485
K++EGT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA
Sbjct: 216 KLIEGTMASVPPQGGRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAS 275
Query: 486 VRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTE 545
V++ + +T+ + +E DLI +GLIPE VGR P++ +L L+ED LV++LTE
Sbjct: 276 VKSKKQRSLTE------VFTEIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTE 329
Query: 546 PKNAL 550
PKNAL
Sbjct: 330 PKNAL 334
>gi|389703170|ref|ZP_10185464.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
HA]
gi|388611573|gb|EIM40673.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
HA]
Length = 436
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 220/291 (75%), Gaps = 19/291 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI-YHANLKKGSGAEPKTAAAVDNDD 319
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ N KK DD
Sbjct: 60 LPKPHEIRAALDQYVIGQDVAKKTLSVAVYNHYKRLKVQTNGKKA-------------DD 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 SVEIAKSNILLVGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A VR +
Sbjct: 227 GRKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTAEVRNK-----EETKK 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 282 LSDLFRQVEATDLVKFGLIPEFIGRLPVIATLDELDEEALMQILTEPKNAL 332
>gi|323136624|ref|ZP_08071705.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylocystis
sp. ATCC 49242]
gi|322397941|gb|EFY00462.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylocystis
sp. ATCC 49242]
Length = 422
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 221/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ +AK+VLSVAV+NHYKR+ HA K G +
Sbjct: 63 IPTPREICKVLDDYVIGQAQAKRVLSVAVHNHYKRLNHAT-KHG---------------D 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKT+LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGVGKTMLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VY+DE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYVDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFGATVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ V+ DL+ +GLIPEFVGR P++ +L L ED L K+LTEPKNAL
Sbjct: 281 GDIFRQVQPEDLLKFGLIPEFVGRLPVIATLEDLDEDALKKILTEPKNAL 330
>gi|319943617|ref|ZP_08017898.1| ATP-dependent Clp protease ATP-binding subunit [Lautropia mirabilis
ATCC 51599]
gi|319742850|gb|EFV95256.1| ATP-dependent Clp protease ATP-binding subunit [Lautropia mirabilis
ATCC 51599]
Length = 421
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 220/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP P EI LD++VIGQ+KAK+ L+VAVYNHYKR+ H KG + D
Sbjct: 62 ELPIPSEIAAILDQYVIGQQKAKRTLAVAVYNHYKRLRH----KG------------DKD 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVESI+ KLL
Sbjct: 106 DVELTKSNILLVGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVESIIQKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A + ++ AQ G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ ++P +G
Sbjct: 166 AACNYEIDKAQTGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTVASIPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF ++K I +R + S IGFGA V+ G +D ++
Sbjct: 226 GRKHPNQDFVQVDTTNILFICGGAFDGMDKVIRDRSERSGIGFGAQVK-----GASDRSL 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L + +E DLI +GLIPE VGR P+L +L L E LV++LTEPKNAL
Sbjct: 281 -SELFQDIEPDDLIKFGLIPELVGRLPVLATLDELDEATLVRILTEPKNAL 330
>gi|300691405|ref|YP_003752400.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Ralstonia solanacearum PSI07]
gi|299078465|emb|CBJ51117.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Ralstonia solanacearum PSI07]
gi|344167642|emb|CCA79882.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [blood disease bacterium R229]
gi|344174668|emb|CCA86476.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Ralstonia syzygii R24]
Length = 424
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 169/301 (56%), Positives = 220/301 (73%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+ GG + DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K
Sbjct: 56 EKEGGLAVKSDLPTPHEIRQSLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK------- 108
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGE
Sbjct: 109 ---------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGE 159
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 160 DVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIE 219
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I +R S IGFGA V++
Sbjct: 220 GTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKIIMQRSDKSGIGFGAEVKSK 279
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
V + +L VE DLI +GLIPE +GR P++ +L L E L+++L EPKNA
Sbjct: 280 EERDVNE------VLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMEILVEPKNA 333
Query: 550 L 550
+
Sbjct: 334 I 334
>gi|445423514|ref|ZP_21436679.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
sp. WC-743]
gi|444755551|gb|ELW80131.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
sp. WC-743]
Length = 436
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 221/290 (76%), Gaps = 17/290 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ + +G +PK D
Sbjct: 60 LPKPHEIRAALDQYVIGQDTAKKTLSVAVYNHYKRLKVSQ----TGHKPK--------DA 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 168 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ D
Sbjct: 228 RKHPQQEFIQVDTANILFICGGAFSGLEKVVQQRQEKGGIGFTADVKNK-----DDTKKV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 283 SELFRQVEAADLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNAL 332
>gi|335042769|ref|ZP_08535796.1| ATP-dependent protease Clp, ATPase subunit [Methylophaga
aminisulfidivorans MP]
gi|333789383|gb|EGL55265.1| ATP-dependent protease Clp, ATPase subunit [Methylophaga
aminisulfidivorans MP]
Length = 423
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 216/290 (74%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+EI LD +VIGQE+AK+ LSVAVYNHYKR+ AN D++
Sbjct: 63 LPTPREINDALDNYVIGQERAKRYLSVAVYNHYKRLRTAN----------------KDND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELSKSNILLIGPTGSGKTLLAETLARQLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ A+ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 167 KCDYDVDKAETGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ILFICGGAF L+K I R Q IGF A +++ V D
Sbjct: 227 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIRNRTQKGGIGFSAELKS-----VDDNKPL 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L +VE DLI YGLIPEFVGR P++ +L L E LV++LTEPKNAL
Sbjct: 282 SESLRTVEPEDLIQYGLIPEFVGRLPVVATLDELDEKALVQILTEPKNAL 331
>gi|260575567|ref|ZP_05843565.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodobacter
sp. SW2]
gi|259022210|gb|EEW25508.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodobacter
sp. SW2]
Length = 421
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 170/301 (56%), Positives = 226/301 (75%), Gaps = 23/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP++ICK LD +VIGQ AK+VLSVAV+NHYKR+ H++
Sbjct: 52 TKATGLKASDGVPTPRDICKVLDDYVIGQIHAKRVLSVAVHNHYKRLNHSS--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
KT ++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 KT--------DIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S+IGFGA V+
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFSGLEKIIAQRNKGSAIGFGAEVKGP 274
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV L + +E DL+ +GLIPEFVGR P++ +LT L E LV +LTEPKNA
Sbjct: 275 EDRGV------GELFKELEPEDLLKFGLIPEFVGRLPVIATLTDLDEAALVTILTEPKNA 328
Query: 550 L 550
L
Sbjct: 329 L 329
>gi|388566135|ref|ZP_10152606.1| ATP-dependent Clp protease ATP-binding subunit [Hydrogenophaga sp.
PBC]
gi|388266641|gb|EIK92160.1| ATP-dependent Clp protease ATP-binding subunit [Hydrogenophaga sp.
PBC]
Length = 421
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 219/293 (74%), Gaps = 20/293 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G++LPTP ++ LD +VIGQ+ AK+ L+VAVYNHYKR+ H K+GS
Sbjct: 62 GDELPTPAQLKGNLDNYVIGQDAAKRALAVAVYNHYKRLRH---KQGS-----------R 107
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D VEL KSN+LL+GPTGSGKTLLA+T+AR +NVPFV+ADATTLT+AGYVGEDVE+I+ K
Sbjct: 108 KDEVELAKSNILLIGPTGSGKTLLAQTMARMLNVPFVMADATTLTEAGYVGEDVENIVAK 167
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL +++E AQQG+VYIDE+DKIT+K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 168 LLQSCNYDIERAQQGIVYIDEIDKITRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPP 227
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP D +Q+DT +ILFICGGAF LEK I R + S IGF A VR+ + +T+
Sbjct: 228 QGGRKHPNQDFLQVDTTNILFICGGAFAGLEKIIENRTEASGIGFSAAVRSKQQRSLTE- 286
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DLI +GLIPE VGR P++ +L L+ED LV +LT+P+NA+
Sbjct: 287 -----VFREVEPEDLIKFGLIPELVGRVPVIATLAELSEDALVDILTQPRNAV 334
>gi|384218432|ref|YP_005609598.1| ATP-dependent Clp protease, ATP-binding subunit [Bradyrhizobium
japonicum USDA 6]
gi|354957331|dbj|BAL10010.1| ATP-dependent Clp protease, ATP-binding subunit [Bradyrhizobium
japonicum USDA 6]
Length = 423
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 171/292 (58%), Positives = 217/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LTEPKNAL
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDETSLKKILTEPKNAL 330
>gi|83721081|ref|YP_442644.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
thailandensis E264]
gi|167581578|ref|ZP_02374452.1| ATP-dependent protease ATP-binding subunit [Burkholderia
thailandensis TXDOH]
gi|167619694|ref|ZP_02388325.1| ATP-dependent protease ATP-binding subunit [Burkholderia
thailandensis Bt4]
gi|257138855|ref|ZP_05587117.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
thailandensis E264]
gi|123536902|sp|Q2SWQ5.1|CLPX_BURTA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|83654906|gb|ABC38969.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
thailandensis E264]
Length = 423
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>gi|407939905|ref|YP_006855546.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax sp.
KKS102]
gi|407897699|gb|AFU46908.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax sp.
KKS102]
Length = 421
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 170/305 (55%), Positives = 222/305 (72%), Gaps = 24/305 (7%)
Query: 246 GGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGS 305
G +R G S DLPTP EI LD +VIGQ+ AK+ L+VAVYNHYKR+ H +
Sbjct: 54 AGDLAREGRS----DLPTPVEIKANLDNYVIGQDVAKRTLAVAVYNHYKRLRHKDKA--- 106
Query: 306 GAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAG 365
+ D+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AG
Sbjct: 107 -----------HKDDVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAG 155
Query: 366 YVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
YVGEDVE+I+ KLL + VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALL
Sbjct: 156 YVGEDVENIVQKLLQSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALL 215
Query: 426 KMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 485
K++EGT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA
Sbjct: 216 KLIEGTMASVPPQGGRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAS 275
Query: 486 VRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTE 545
V++ + +T+ + +E DLI +GLIPE VGR P++ +L L+ED LV++LTE
Sbjct: 276 VKSKKQRSLTE------VFTEIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTE 329
Query: 546 PKNAL 550
PKNAL
Sbjct: 330 PKNAL 334
>gi|403051410|ref|ZP_10905894.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
bereziniae LMG 1003]
Length = 436
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 221/290 (76%), Gaps = 17/290 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ + +G +PK D
Sbjct: 60 LPKPHEIRAALDQYVIGQDTAKKTLSVAVYNHYKRLKVSQ----TGHKPK--------DA 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 168 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ D
Sbjct: 228 RKHPQQEFIQVDTANILFICGGAFSGLEKVVQQRQEKGGIGFTADVKNK-----DDTKKV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 283 SELFRQVEAADLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNAL 332
>gi|83745914|ref|ZP_00942971.1| ClpX [Ralstonia solanacearum UW551]
gi|300703973|ref|YP_003745575.1| ATPase and specificity subunit of clpx-clpp ATP-dependent serine
protease [Ralstonia solanacearum CFBP2957]
gi|386333414|ref|YP_006029584.1| ATPase and specificity subunit of clpx-clpp ATP-dependent serine
protease [Ralstonia solanacearum Po82]
gi|421888084|ref|ZP_16319198.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Ralstonia solanacearum K60-1]
gi|83727604|gb|EAP74725.1| ClpX [Ralstonia solanacearum UW551]
gi|299071636|emb|CBJ42960.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Ralstonia solanacearum CFBP2957]
gi|334195863|gb|AEG69048.1| ATPase and specificity subunit of clpx-clpp ATP-dependent serine
protease [Ralstonia solanacearum Po82]
gi|378966547|emb|CCF95946.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Ralstonia solanacearum K60-1]
Length = 424
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 169/301 (56%), Positives = 220/301 (73%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+ GG + DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K
Sbjct: 56 EKEGGLAVKSDLPTPHEIRQSLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK------- 108
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGE
Sbjct: 109 ---------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGE 159
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 160 DVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIE 219
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I +R S IGFGA V++
Sbjct: 220 GTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKIIMQRSDKSGIGFGAEVKSR 279
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
V + +L VE DLI +GLIPE +GR P++ +L L E L+++L EPKNA
Sbjct: 280 EERDVNE------VLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMEILVEPKNA 333
Query: 550 L 550
+
Sbjct: 334 I 334
>gi|395006779|ref|ZP_10390580.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Acidovorax
sp. CF316]
gi|394315233|gb|EJE52049.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Acidovorax
sp. CF316]
Length = 421
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 218/291 (74%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQ++AK+ L+VAVYNHYKR+ H + + D
Sbjct: 64 DLPTPLEIKTNLDNYVIGQDQAKRTLAVAVYNHYKRLRHKDKA--------------HKD 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
++EL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DIELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGASVKSKKQRSLTE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +E DLI +G+IPE VGR P++ +L L+ED LV++LTEPKNAL
Sbjct: 287 ---VFTEIEPEDLIKFGIIPELVGRMPVVTALAELSEDALVQILTEPKNAL 334
>gi|389756356|ref|ZP_10191466.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter sp.
115]
gi|388431604|gb|EIL88662.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter sp.
115]
Length = 432
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 219/290 (75%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI + L+++V+GQ +AKK LSVAVYNHYKR+ + ++
Sbjct: 66 LPKPKEIMETLNQYVVGQTRAKKALSVAVYNHYKRM----------------ESRQKNEE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVDKAQSGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTLASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DTK+ILFICGGAF LEK I +R + + IGFGA VR+ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLEKVIQQRSETTGIGFGAEVRSKER-----TENL 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE +DL+ +GLIPEFVGR P++ +L L ED LVK+LTEP+NA+
Sbjct: 285 GKLLAEVEPADLVRFGLIPEFVGRLPVVATLDELDEDALVKILTEPRNAV 334
>gi|407785098|ref|ZP_11132246.1| ATP-dependent protease ATP-binding subunit ClpX [Celeribacter
baekdonensis B30]
gi|407203130|gb|EKE73117.1| ATP-dependent protease ATP-binding subunit ClpX [Celeribacter
baekdonensis B30]
Length = 421
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 166/301 (55%), Positives = 227/301 (75%), Gaps = 21/301 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +P P++IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA KG+G
Sbjct: 52 TKSSGLKSSEGVPAPRDICQVLDDYVIGQATAKRVLSVAVHNHYKRLNHA--AKGNG--- 106
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 107 ----------DIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + +++GFGA V+ +
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRNKGTAMGFGADVKND 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNA
Sbjct: 277 EDKGV------GEMFKQLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTQPKNA 330
Query: 550 L 550
L
Sbjct: 331 L 331
>gi|397664326|ref|YP_006505864.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Legionella pneumophila subsp. pneumophila]
gi|395127737|emb|CCD05936.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Legionella pneumophila subsp. pneumophila]
Length = 391
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 218/290 (75%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI LD++VIGQ+ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 30 LPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS-----------------EDG 72
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 73 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 132
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 133 KCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 192
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER SSIGF A +++ +
Sbjct: 193 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSSNDE----V 248
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L +ES DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL
Sbjct: 249 SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNAL 298
>gi|126462594|ref|YP_001043708.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides ATCC 17029]
gi|221639634|ref|YP_002525896.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides KD131]
gi|332558620|ref|ZP_08412942.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides WS8N]
gi|429209760|ref|ZP_19200987.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rhodobacter
sp. AKP1]
gi|166215194|sp|A3PKS0.1|CLPX_RHOS1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763860|sp|B9KJU8.1|CLPX_RHOSK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|126104258|gb|ABN76936.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodobacter
sphaeroides ATCC 17029]
gi|221160415|gb|ACM01395.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhodobacter
sphaeroides KD131]
gi|332276332|gb|EGJ21647.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides WS8N]
gi|428187303|gb|EKX55888.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rhodobacter
sp. AKP1]
Length = 421
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 171/301 (56%), Positives = 225/301 (74%), Gaps = 23/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP+EICK LD +VIGQ AK+VLSVAV+NHYKR+ H++
Sbjct: 52 TKSTGLKSADGVPTPREICKVLDDYVIGQMHAKRVLSVAVHNHYKRLNHSS--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
KT ++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 KT--------DIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S IGFGA V+
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGAEVKD- 273
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
DA L + +E DL+ +GLIPEFVGR P++ +LT L E LV +LTEPKNA
Sbjct: 274 -----PDARGVGELFKELEPEDLLKFGLIPEFVGRLPVIATLTDLDEAALVTILTEPKNA 328
Query: 550 L 550
L
Sbjct: 329 L 329
>gi|409401839|ref|ZP_11251493.1| ATP-dependent protease ATP-binding subunit ClpX [Acidocella sp.
MX-AZ02]
gi|409129476|gb|EKM99327.1| ATP-dependent protease ATP-binding subunit ClpX [Acidocella sp.
MX-AZ02]
Length = 418
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 220/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ AK+VLSVAV+NHYKR+ HA ++
Sbjct: 62 VPTPREICKVLDDYVIGQMHAKRVLSVAVHNHYKRLSHAT----------------KSND 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNIMLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + S IGFGA VR+ D
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGKGSGIGFGADVRSQ------DERRM 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++L VE DL+ +GLIPEF+GR P++ +L L E L+++LT+PKNAL
Sbjct: 280 GAILREVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNAL 329
>gi|172039351|ref|YP_001805852.1| ATP-dependent protease ATP-binding subunit ClpX [Cyanothece sp.
ATCC 51142]
gi|354552382|ref|ZP_08971690.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. ATCC 51472]
gi|226708146|sp|B1WUD2.1|CLPX_CYAA5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|171700805|gb|ACB53786.1| ATP-dependent Clp protease, ATPase subunit [Cyanothece sp. ATCC
51142]
gi|353555704|gb|EHC25092.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. ATCC 51472]
Length = 435
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 222/292 (76%), Gaps = 18/292 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LP P EI LD++VIGQ++AKKVLSVAVYNHYKR+ +L +G +++
Sbjct: 71 KELPKPMEIKDYLDEYVIGQDEAKKVLSVAVYNHYKRL---SLVQGK----------NDE 117
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
DN+EL+KSN+LLMGPTGSGKTLLA+TLA+ + VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 118 DNIELQKSNILLMGPTGSGKTLLAQTLAQVLEVPFAVADATTLTEAGYVGEDVENILLRL 177
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +
Sbjct: 178 LQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQ 237
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV LE+ I +R S+GF P G +
Sbjct: 238 GGRKHPYQDCIQIDTSNILFICGGAFVGLERVIEQRIGKKSMGFVRP-----GEGQSKEK 292
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L++ VE DL+ +G+IPEFVGR P++ +L LTE+ LV +LT+P+NAL
Sbjct: 293 RAADLMQRVEPDDLVKFGMIPEFVGRIPVMAALNPLTEETLVAILTKPRNAL 344
>gi|83943112|ref|ZP_00955572.1| ATP-dependent protease ATP-binding subunit [Sulfitobacter sp.
EE-36]
gi|83954270|ref|ZP_00962990.1| ATP-dependent protease ATP-binding subunit [Sulfitobacter sp.
NAS-14.1]
gi|83841307|gb|EAP80477.1| ATP-dependent protease ATP-binding subunit [Sulfitobacter sp.
NAS-14.1]
gi|83846120|gb|EAP83997.1| ATP-dependent protease ATP-binding subunit [Sulfitobacter sp.
EE-36]
Length = 421
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 170/301 (56%), Positives = 223/301 (74%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC LD +VIGQ AK+VLSVAV+NHYKR+ HA +KG
Sbjct: 52 TKASGLKATDGVPTPKDICDVLDDYVIGQAMAKRVLSVAVHNHYKRLNHA--QKGG---- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I+ R + S++GFGA VR
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAARGKGSAMGFGADVRDQ 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
DA + +E DL+ +GLIPEFVGR P+L +L L ED LV +LTEPKNA
Sbjct: 276 ------DARGIGEIFTDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTEPKNA 329
Query: 550 L 550
L
Sbjct: 330 L 330
>gi|367473665|ref|ZP_09473213.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. ORS 285]
gi|365274061|emb|CCD85681.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. ORS 285]
Length = 424
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 171/292 (58%), Positives = 217/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHSD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISSRGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LTEPKNAL
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNAL 330
>gi|383771491|ref|YP_005450556.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bradyrhizobium
sp. S23321]
gi|381359614|dbj|BAL76444.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bradyrhizobium
sp. S23321]
Length = 423
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 171/292 (58%), Positives = 217/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LTEPKNAL
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTEPKNAL 330
>gi|312113124|ref|YP_004010720.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rhodomicrobium
vannielii ATCC 17100]
gi|311218253|gb|ADP69621.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodomicrobium vannielii ATCC 17100]
Length = 422
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 171/290 (58%), Positives = 222/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ+ AK+VLSVAV+NHYKRI H+ A +ND
Sbjct: 64 VPTPQEICTVLDDYVIGQDYAKRVLSVAVHNHYKRINHS--------------AKNND-- 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NV+ AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 AADYNVDRAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I++R + SSIGFGA V + D T
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFSGLEKIIAQRGKSSSIGFGAKVTSE------DDRRT 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL+ +GLIPEF+GR P+L +L L E LVK+L+EPKNAL
Sbjct: 282 GEILRGVEPEDLLRFGLIPEFIGRLPVLATLEDLDEVALVKILSEPKNAL 331
>gi|406706128|ref|YP_006756481.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [alpha
proteobacterium HIMB5]
gi|406651904|gb|AFS47304.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [alpha
proteobacterium HIMB5]
Length = 422
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 169/290 (58%), Positives = 221/290 (76%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEIC LD +VIGQ AKKVLSVAV+NHYKR+ + E KT+ N
Sbjct: 59 LPSPKEICTVLDDYVIGQAHAKKVLSVAVHNHYKRLNY---------ESKTSK------N 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 104 VELSKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 164 AADYNVEKAQRGIVYIDEVDKISRKSENPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGFGA V+ T T
Sbjct: 224 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISQRDKGTSIGFGADVKN------TQDKKT 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++++E DL+ YGLIPEF+GR P++ +L L E L+K+L EPKN+L
Sbjct: 278 GEWMKTLEPEDLLKYGLIPEFIGRLPMIATLEDLDEKSLIKILQEPKNSL 327
>gi|237747782|ref|ZP_04578262.1| ATP-dependent protease ATP-binding subunit [Oxalobacter formigenes
OXCC13]
gi|229379144|gb|EEO29235.1| ATP-dependent protease ATP-binding subunit [Oxalobacter formigenes
OXCC13]
Length = 423
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 177/300 (59%), Positives = 223/300 (74%), Gaps = 22/300 (7%)
Query: 251 RWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPK 310
+G N G +LPTPKEIC LD++VIGQE+AKK+LSVAVYNHYKR+ K G +
Sbjct: 56 EFGQEN-GSELPTPKEICNLLDQYVIGQEQAKKILSVAVYNHYKRL------KFYGGK-- 106
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
+D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGED
Sbjct: 107 -------NDDVELSKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGED 159
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VE+I+ KLL E++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLKM+EG
Sbjct: 160 VENIIQKLLQGCEYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKMIEG 219
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T+ +VP +G RKHP D I +DT +I+FICGGAF L K IS R + IGF A V++
Sbjct: 220 TMASVPPQGGRKHPNQDFISVDTTNIMFICGGAFDGLTKIISNRSEKGGIGFSARVKSP- 278
Query: 491 RAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
TD V S L VE DLI +GLIPE +GR P++ L LTE+ LV +L +PKNAL
Sbjct: 279 ----TD-IVESEKLADVEPEDLIKFGLIPELIGRLPVVAVLHELTEEALVDILEKPKNAL 333
>gi|387131589|ref|YP_006294479.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylophaga
sp. JAM7]
gi|386272878|gb|AFJ03792.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylophaga
sp. JAM7]
Length = 423
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 213/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQEKAK+VLSVAVYNHYKR+ H D+
Sbjct: 63 LPTPHEINTALDNYVIGQEKAKRVLSVAVYNHYKRLRHGQ----------------KSDD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELSKSNILLIGPTGSGKTLLAETLARQLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ A+ G+VYIDE+DKI+KK+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 167 KCDYDVDKAETGIVYIDEIDKISKKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ILFICGGAF L+K I R IGF A V++ V
Sbjct: 227 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIRNRSHKGGIGFSAEVKS-----VETQRSF 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L++VE DLI YGLIPEFVGR P++ +L L E L+++LTEPKNAL
Sbjct: 282 SEALQTVEPEDLIQYGLIPEFVGRLPVVATLNELDEAALIQILTEPKNAL 331
>gi|146341126|ref|YP_001206174.1| ATP-dependent protease ATP-binding subunit ClpX [Bradyrhizobium sp.
ORS 278]
gi|166214759|sp|A4YVM3.1|CLPX_BRASO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|146193932|emb|CAL77949.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. ORS 278]
Length = 424
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 171/292 (58%), Positives = 217/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHSD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LTEPKNAL
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNAL 330
>gi|148255922|ref|YP_001240507.1| ATP-dependent protease ATP-binding subunit ClpX [Bradyrhizobium sp.
BTAi1]
gi|166214758|sp|A5EKA7.1|CLPX_BRASB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|146408095|gb|ABQ36601.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bradyrhizobium
sp. BTAi1]
Length = 424
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 171/292 (58%), Positives = 217/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHSD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LTEPKNAL
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNAL 330
>gi|295676518|ref|YP_003605042.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Burkholderia
sp. CCGE1002]
gi|295436361|gb|ADG15531.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
sp. CCGE1002]
Length = 423
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 222/306 (72%), Gaps = 24/306 (7%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G G S DLPTP+EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H
Sbjct: 52 AAGAGIEAGLSK--SDLPTPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKH------ 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+D D +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+A
Sbjct: 104 ----------LDKKDEIELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEA 153
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQAL
Sbjct: 154 GYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 213
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF LEK I +R + + IGFGA
Sbjct: 214 LKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVIVDRTEKTGIGFGA 273
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V++ DA +L VE DLI +GLIPE +GR P++ +L L E L+K+L
Sbjct: 274 SVKSKQD---RDAG---EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILV 327
Query: 545 EPKNAL 550
EPKNAL
Sbjct: 328 EPKNAL 333
>gi|421745791|ref|ZP_16183629.1| ATP-dependent protease ATP-binding subunit ClpX [Cupriavidus
necator HPC(L)]
gi|409775705|gb|EKN57163.1| ATP-dependent protease ATP-binding subunit ClpX [Cupriavidus
necator HPC(L)]
Length = 424
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 216/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K D
Sbjct: 66 DLPTPHEIRESLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK----------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I +R + IGFGA V++ V
Sbjct: 230 GRKHPNQDFLQVDTTNILFICGGAFDGLEKVIMQRSDKTGIGFGAQVQSKEERDV----- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L E DLI +GLIPE +GR P++ +L+ L E LV++L EPKNAL
Sbjct: 285 -SEVLPQTEPEDLIKFGLIPELIGRLPVVATLSKLDEAALVQILIEPKNAL 334
>gi|15606540|ref|NP_213920.1| ATP-dependent protease ATP-binding subunit ClpX [Aquifex aeolicus
VF5]
gi|6225162|sp|O67356.1|CLPX_AQUAE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|2983756|gb|AAC07316.1| ATP-dependent protease ATPase subunit clpX [Aquifex aeolicus VF5]
Length = 412
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 172/294 (58%), Positives = 223/294 (75%), Gaps = 24/294 (8%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+D+P P++I K LD++VIGQE+AKK+LSVAVYNHYKRI K A +
Sbjct: 57 KDIPKPEQIKKILDEYVIGQERAKKILSVAVYNHYKRI-------------KAKEAGLSL 103
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VELEKSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE++L +L
Sbjct: 104 DDVELEKSNILLIGPTGSGKTLLARTLAKILNVPFAIADATSLTEAGYVGEDVENVLVRL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLN--ISRDVSGEGVQQALLKMLEGTIVNVP 436
L +++V+AAQ+G+VYIDE+DKI KK+ +N I+RDVSGEGVQQALLK++EG++VNVP
Sbjct: 164 LQACDYDVKAAQKGIVYIDEIDKIAKKS-GINPSITRDVSGEGVQQALLKIVEGSVVNVP 222
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHP + IQ+DT DILFICGGAFV LE I +R S +GF A ++ +
Sbjct: 223 PQGGRKHPHQEFIQVDTTDILFICGGAFVGLEDIIKQRLGKSRVGFEAEIKKVDK----- 277
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LLE VE DLI +G+IPEF+GRFP++ +L LTED+LV++L EPKNAL
Sbjct: 278 ---EQDLLELVEPDDLIRFGMIPEFIGRFPVIATLRELTEDELVRILVEPKNAL 328
>gi|146277489|ref|YP_001167648.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides ATCC 17025]
gi|166215195|sp|A4WSH9.1|CLPX_RHOS5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|145555730|gb|ABP70343.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodobacter
sphaeroides ATCC 17025]
Length = 421
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 169/301 (56%), Positives = 223/301 (74%), Gaps = 23/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP+EICK LD +VIGQ AK+VLSVAV+NHYKR+ H++
Sbjct: 52 TKSTGLKSADGVPTPREICKVLDDYVIGQMHAKRVLSVAVHNHYKRLNHSS--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 --------KNDIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S IGFGA V+
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGAEVKDP 274
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV L +E DL+ +GLIPEFVGR P++ +LT L E LV +LTEPKNA
Sbjct: 275 DSRGV------GELFTELEPEDLLKFGLIPEFVGRLPVIATLTDLDEAALVTILTEPKNA 328
Query: 550 L 550
L
Sbjct: 329 L 329
>gi|209521457|ref|ZP_03270165.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
sp. H160]
gi|209498113|gb|EDZ98260.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
sp. H160]
Length = 423
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 222/306 (72%), Gaps = 24/306 (7%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G G S DLPTP+EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H
Sbjct: 52 AAGAGIEAGLSK--SDLPTPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKH------ 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+D D +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+A
Sbjct: 104 ----------LDKKDEIELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEA 153
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQAL
Sbjct: 154 GYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 213
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF LEK I +R + + IGFGA
Sbjct: 214 LKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVIVDRTEKTGIGFGA 273
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V++ DA +L VE DLI +GLIPE +GR P++ +L L E L+K+L
Sbjct: 274 SVKSKQD---RDAG---EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILV 327
Query: 545 EPKNAL 550
EPKNAL
Sbjct: 328 EPKNAL 333
>gi|53723666|ref|YP_103111.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
mallei ATCC 23344]
gi|67642017|ref|ZP_00440780.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei GB8 horse 4]
gi|121600417|ref|YP_993273.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
mallei SAVP1]
gi|124383380|ref|YP_001029283.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
mallei NCTC 10229]
gi|126448291|ref|YP_001080783.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
mallei NCTC 10247]
gi|166998704|ref|ZP_02264558.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei PRL-20]
gi|254177862|ref|ZP_04884517.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei ATCC 10399]
gi|254200062|ref|ZP_04906428.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei FMH]
gi|254206397|ref|ZP_04912749.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei JHU]
gi|254358193|ref|ZP_04974466.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei 2002721280]
gi|61211429|sp|Q62JK8.1|CLPX_BURMA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214762|sp|A3MKJ7.1|CLPX_BURM7 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214763|sp|A2SBG4.1|CLPX_BURM9 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214764|sp|A1V4X0.1|CLPX_BURMS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|52427089|gb|AAU47682.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei ATCC 23344]
gi|121229227|gb|ABM51745.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei SAVP1]
gi|124291400|gb|ABN00669.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei NCTC 10229]
gi|126241161|gb|ABO04254.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei NCTC 10247]
gi|147749658|gb|EDK56732.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei FMH]
gi|147753840|gb|EDK60905.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei JHU]
gi|148027320|gb|EDK85341.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei 2002721280]
gi|160698901|gb|EDP88871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei ATCC 10399]
gi|238523065|gb|EEP86506.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei GB8 horse 4]
gi|243065059|gb|EES47245.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei PRL-20]
Length = 423
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI+ K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISCKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>gi|365879288|ref|ZP_09418720.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. ORS 375]
gi|365292813|emb|CCD91251.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. ORS 375]
Length = 424
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 171/292 (58%), Positives = 217/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHSD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LTEPKNAL
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNAL 330
>gi|406999543|gb|EKE17146.1| hypothetical protein ACD_10C00602G0003 [uncultured bacterium]
Length = 420
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 215/291 (73%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+EIC LD++VIGQ AK++L+VAVYNHYKR+ H+ G
Sbjct: 60 DLPTPREICSILDEYVIGQVVAKRILAVAVYNHYKRLRHSAKHAG--------------- 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 EVELAKSNILLVGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLL 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ ++++E AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ ++P +G
Sbjct: 165 QKCDYDIEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASIPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + IGFGA V++ D
Sbjct: 225 GRKHPNQDFVQVDTTNILFICGGAFAGLEKIIQNRSEKGGIGFGAEVKSK-----EDKKA 279
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L E DLI +GLIPE +GR P++ +L L E L+++LTEPKNAL
Sbjct: 280 IGQILLDAEPEDLIKFGLIPELIGRLPVVATLQELEEPALIQILTEPKNAL 330
>gi|119774362|ref|YP_927102.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella
amazonensis SB2B]
gi|166215200|sp|A1S4X6.1|CLPX_SHEAM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|119766862|gb|ABL99432.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
amazonensis SB2B]
Length = 425
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 171/291 (58%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQEKAKKVLSVAVYNHYKR+ +A PK D
Sbjct: 64 LPTPHELRAHLDDYVIGQEKAKKVLSVAVYNHYKRLRNAG--------PK--------DG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G +
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRTHTGSGIGFGAQVK-----GKEEKES 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L VE DL+ YGLIPEF+GR P++ +L L ED L+++L+EPKNAL
Sbjct: 283 MSDILSQVEPEDLVKYGLIPEFIGRLPVVATLAELDEDALIQILSEPKNAL 333
>gi|241663133|ref|YP_002981493.1| ATP-dependent protease ATP-binding subunit ClpX [Ralstonia
pickettii 12D]
gi|309781949|ref|ZP_07676680.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ralstonia sp.
5_7_47FAA]
gi|404377637|ref|ZP_10982737.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Ralstonia sp.
5_2_56FAA]
gi|240865160|gb|ACS62821.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ralstonia
pickettii 12D]
gi|308919293|gb|EFP64959.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ralstonia sp.
5_7_47FAA]
gi|348611500|gb|EGY61145.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Ralstonia sp.
5_2_56FAA]
Length = 424
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/301 (56%), Positives = 220/301 (73%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+ GG + DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K
Sbjct: 56 EKEGGLAVKSDLPTPHEIRQSLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK------- 108
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGE
Sbjct: 109 ---------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGE 159
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 160 DVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVE 219
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I +R + IGFGA V++
Sbjct: 220 GTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKIIMQRSDKTGIGFGAEVQSK 279
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
V S +L VE DLI +GLIPE +GR P++ +L L E L+++L EPKNA
Sbjct: 280 EERDV------SEVLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMEILVEPKNA 333
Query: 550 L 550
+
Sbjct: 334 I 334
>gi|187928949|ref|YP_001899436.1| ATP-dependent protease ATP-binding subunit ClpX [Ralstonia
pickettii 12J]
gi|238691846|sp|B2UFQ3.1|CLPX_RALPJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|187725839|gb|ACD27004.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ralstonia
pickettii 12J]
Length = 424
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/301 (56%), Positives = 220/301 (73%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+ GG + DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K
Sbjct: 56 EKEGGLAVKSDLPTPHEIRQSLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK------- 108
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGE
Sbjct: 109 ---------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGE 159
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 160 DVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVE 219
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I +R + IGFGA V++
Sbjct: 220 GTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKIIMQRSDKTGIGFGAEVQSK 279
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
V S +L VE DLI +GLIPE +GR P++ +L L E L+++L EPKNA
Sbjct: 280 EERDV------SEVLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMEILVEPKNA 333
Query: 550 L 550
+
Sbjct: 334 I 334
>gi|406980052|gb|EKE01719.1| hypothetical protein ACD_21C00067G0003 [uncultured bacterium]
Length = 421
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 217/290 (74%), Gaps = 19/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+EI KGL+ +VIGQE AKK LSVAVYNHYKR+ H + K ND +
Sbjct: 62 LPTPEEINKGLNDYVIGQEYAKKALSVAVYNHYKRLAHKDKK--------------NDGD 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVG+D+E+I+ KLL
Sbjct: 108 VELSKSNILLIGPTGSGKTLLAETLARMLNVPFAIADATTLTEAGYVGDDIETIVQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++ + A+ G++YIDE+DKI++K++S +I+RDVSGEGVQQALLK++EGT+ +VP G+
Sbjct: 168 KCDYDTKKAETGIIYIDEIDKISRKSDSASITRDVSGEGVQQALLKLIEGTVASVPPHGS 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q++TK+ILFICGGAF +L+K I R + S IGF A + G +
Sbjct: 228 RKHPQQEYLQVNTKNILFICGGAFAELDKIIKTRTEKSGIGFAAEIY-----GEKNKKDV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEFVGR P++ L L E +LV+VL EPKNAL
Sbjct: 283 GELLRQVEPEDLIKFGLIPEFVGRLPVIAVLDELEETELVRVLKEPKNAL 332
>gi|340028582|ref|ZP_08664645.1| ATP-dependent protease ATP-binding subunit ClpX [Paracoccus sp.
TRP]
Length = 421
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 163/293 (55%), Positives = 223/293 (76%), Gaps = 23/293 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ +PTP+EIC LD +VIGQE AK+VLSVAV+NHYKR+ H++
Sbjct: 60 GDGVPTPREICNVLDDYVIGQEHAKRVLSVAVHNHYKRLNHSS----------------- 102
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 103 KNDIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILK 162
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 163 LLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPP 222
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + +++GFGA V+ N GV
Sbjct: 223 QGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRNKGTAMGFGASVKENDDKGV--- 279
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L + +E DL+ +GLIPEFVGR P++ +L L E L+ +LT+PKNAL
Sbjct: 280 ---GELFKQLEPEDLLKFGLIPEFVGRLPVIATLGDLDEQALITILTQPKNAL 329
>gi|117921101|ref|YP_870293.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella sp.
ANA-3]
gi|166215205|sp|A0KYL8.1|CLPX_SHESA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|117613433|gb|ABK48887.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
sp. ANA-3]
Length = 426
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 171/293 (58%), Positives = 221/293 (75%), Gaps = 22/293 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +++ PK
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLRNSS--------PK-------- 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G D
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKDK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L+EPKNAL
Sbjct: 282 ATISQTLSQVEPEDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNAL 334
>gi|113970829|ref|YP_734622.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella sp.
MR-4]
gi|114048054|ref|YP_738604.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella sp.
MR-7]
gi|123131263|sp|Q0HTK8.1|CLPX_SHESR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123324884|sp|Q0HHA2.1|CLPX_SHESM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|113885513|gb|ABI39565.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella sp.
MR-4]
gi|113889496|gb|ABI43547.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella sp.
MR-7]
Length = 426
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 171/291 (58%), Positives = 220/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +++ PK D
Sbjct: 65 LPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLRNSS--------PK--------DG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G D A
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKDKAT 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L+EPKNAL
Sbjct: 284 ISQTLSQVEPEDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNAL 334
>gi|85704730|ref|ZP_01035831.1| ATP-dependent protease ATP-binding subunit [Roseovarius sp. 217]
gi|85670548|gb|EAQ25408.1| ATP-dependent protease ATP-binding subunit [Roseovarius sp. 217]
Length = 422
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 167/301 (55%), Positives = 222/301 (73%), Gaps = 23/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +P P++ICK LD +VIGQ +AKKVLSVAV+NHYKR+ ++
Sbjct: 52 TKTAGIKSSEGIPAPRDICKVLDDYVIGQARAKKVLSVAVHNHYKRLNNSG--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 --------KSDIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VR N
Sbjct: 215 GTVAAVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDN 274
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
DA + +E DL+ +GLIPEFVGR P++ +L L ED LV +LT+PKNA
Sbjct: 275 ------DARGIGEIFTDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILTQPKNA 328
Query: 550 L 550
L
Sbjct: 329 L 329
>gi|255019391|ref|ZP_05291500.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Acidithiobacillus caldus ATCC 51756]
gi|340782144|ref|YP_004748751.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Acidithiobacillus caldus SM-1]
gi|254971163|gb|EET28616.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Acidithiobacillus caldus ATCC 51756]
gi|340556297|gb|AEK58051.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Acidithiobacillus caldus SM-1]
Length = 427
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/294 (57%), Positives = 223/294 (75%), Gaps = 20/294 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G LP P EI K LD++VIGQ+ AKKVLSVAVYNHYKR+ H G G
Sbjct: 61 GSKLPKPMEIRKTLDEYVIGQDAAKKVLSVAVYNHYKRLEHG----GKGG---------R 107
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D++VEL+KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 108 DNDVELDKSNILLIGPTGSGKTLLAQTLARLLNVPFAMADATTLTEAGYVGEDVENIIQK 167
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 168 LLQKCDYDVEKAQTGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPP 227
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP+ + +Q+DT+ ILFICGGAF LEK ++ R + +GF A ++ TD
Sbjct: 228 QGGRKHPQQEFLQVDTRHILFICGGAFAGLEKAVASRVEKGGMGFNAQIKR------TDK 281
Query: 498 AVTSSL-LESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+S+L +E++E DL+ YGLIPEFVGR P++ L L ED LV +LTEP+N+L
Sbjct: 282 QNSSNLMMENLEPEDLVRYGLIPEFVGRLPVIALLEELDEDALVSILTEPRNSL 335
>gi|39936025|ref|NP_948301.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris CGA009]
gi|192291680|ref|YP_001992285.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris TIE-1]
gi|61211520|sp|Q6N5L4.1|CLPX_RHOPA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|229484081|sp|B3Q7P4.1|CLPX_RHOPT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|39649879|emb|CAE28401.1| ATP-dependent Clp protease ATP binding subunit ClpX
[Rhodopseudomonas palustris CGA009]
gi|192285429|gb|ACF01810.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodopseudomonas palustris TIE-1]
Length = 424
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 218/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISSRGRTTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LT+PKNAL
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTDPKNAL 330
>gi|337286232|ref|YP_004625705.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermodesulfatator indicus DSM 15286]
gi|335359060|gb|AEH44741.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermodesulfatator indicus DSM 15286]
Length = 415
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 172/292 (58%), Positives = 220/292 (75%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P EI LD++V+GQEKAKK+LSVAV+NHYKRI E + + +
Sbjct: 61 IPKPSEIKAFLDQYVVGQEKAKKILSVAVHNHYKRI-----------ESRVSL-----NG 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN++L+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+I+ LL
Sbjct: 105 VELQKSNIMLIGPTGSGKTLLAQTLAKFLNVPFTIADATTLTEAGYVGEDVENIILNLLQ 164
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE AQ+G+VYIDE+DKI KK +S +I+RDVSGEGVQQALLK+LEGT+ NVP KG
Sbjct: 165 AADYDVELAQRGIVYIDEIDKIAKKTDSPSITRDVSGEGVQQALLKILEGTVANVPPKGG 224
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + I++DT +ILFICGGAFV LE+ I ER SIGFGA +++ +M G
Sbjct: 225 RKHPQQEFIKVDTTNILFICGGAFVGLERIIKERLGQRSIGFGADIKSAKDMSIG----- 279
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +G+IPEFVGR PI+ +L LTE +L+K+LTEPKNAL
Sbjct: 280 ---EILAHVEPEDLIKFGMIPEFVGRVPIVATLDELTEKELIKILTEPKNAL 328
>gi|86608810|ref|YP_477572.1| ATP-dependent protease ATP-binding subunit ClpX [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|123502535|sp|Q2JLU2.1|CLPX_SYNJB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|86557352|gb|ABD02309.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 448
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/290 (58%), Positives = 219/290 (75%), Gaps = 11/290 (3%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQEKAKKVLSVAVYNHYKR+ + A P + V D
Sbjct: 79 LPKPQEIMRYLDQYVIGQEKAKKVLSVAVYNHYKRL-------AAKANPGSVG-VSELDE 130
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+IL +LL
Sbjct: 131 VELQKSNILIIGPTGSGKTLLAETLARMLDVPFAVADATTLTEAGYVGEDVENILLRLLQ 190
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +G
Sbjct: 191 VADMDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVPPQGG 250
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT +ILFICGGAFV LEK I +R S+GF ++ + V+
Sbjct: 251 RKHPYQDCIQIDTSNILFICGGAFVGLEKVIEQRIGKKSMGF---IKPGEQLSVSREQRM 307
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++ L+++E DLI YG+IPEF GR P++ +L L E L +LT+PKNA+
Sbjct: 308 ANALKALEPEDLIKYGMIPEFTGRLPVVATLDPLDEKALEAILTQPKNAI 357
>gi|186475777|ref|YP_001857247.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
phymatum STM815]
gi|238691290|sp|B2JGL6.1|CLPX_BURP8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|184192236|gb|ACC70201.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
phymatum STM815]
Length = 423
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 222/306 (72%), Gaps = 24/306 (7%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G G S DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H
Sbjct: 52 AAGAGLETGLSK--SDLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH------ 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+D D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+A
Sbjct: 104 ----------LDKKDDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEA 153
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQAL
Sbjct: 154 GYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 213
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF LEK I +R + + IGFGA
Sbjct: 214 LKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVIVDRTEKTGIGFGA 273
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V++ DA +L VE DLI +GLIPE +GR P++ +L L E L+K+L
Sbjct: 274 SVKSKQD---RDAG---EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDETALMKILV 327
Query: 545 EPKNAL 550
EPKNAL
Sbjct: 328 EPKNAL 333
>gi|333368409|ref|ZP_08460608.1| ATP-dependent Clp protease ATP-binding subunit [Psychrobacter sp.
1501(2011)]
gi|332977274|gb|EGK14065.1| ATP-dependent Clp protease ATP-binding subunit [Psychrobacter sp.
1501(2011)]
Length = 425
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 172/315 (54%), Positives = 225/315 (71%), Gaps = 14/315 (4%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G S G G + W L + LPTPKEI + LD +VIGQE AKK LSVAVYNHYKR+
Sbjct: 45 GDANSVEGEDGEVNTW----LTKKLPTPKEIRQHLDSYVIGQETAKKALSVAVYNHYKRL 100
Query: 297 YHANLKKGSGAEPKTAAAVDNDDN-VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVI 355
A A+ + A + DD VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +
Sbjct: 101 KVA----AKLADDRKQAKIGADDAMVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFAM 156
Query: 356 ADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDV 415
ADATTLT+AGYVGEDVE+I+ KLL A+++VE A+QG++Y+DE+DKI+KK E+++I+RDV
Sbjct: 157 ADATTLTEAGYVGEDVENIVQKLLQAADYDVERAEQGIIYVDEIDKISKKGENMSITRDV 216
Query: 416 SGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERR 475
SGEGVQQALLK++EGT+ +P G RKHP + IQ+DT +IL I GGAF L+K I +R
Sbjct: 217 SGEGVQQALLKLIEGTVAAIPPHGGRKHPNQELIQVDTSNILIIVGGAFSGLDKVIQQRT 276
Query: 476 QDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALT 535
+ S IGF A V++ D + L + VE DLI +GLIPE +GR P++ +L L
Sbjct: 277 EKSGIGFNAEVKSK-----EDGKQLTELFKQVEPEDLIKFGLIPELIGRLPVIATLEELD 331
Query: 536 EDQLVKVLTEPKNAL 550
ED L+++LTEPKNA+
Sbjct: 332 EDALMQILTEPKNAI 346
>gi|329850565|ref|ZP_08265410.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Asticcacaulis
biprosthecum C19]
gi|328840880|gb|EGF90451.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Asticcacaulis
biprosthecum C19]
Length = 387
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 174/292 (59%), Positives = 224/292 (76%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ +AKKVLSVAV+NHYKR+ HA +KG ++
Sbjct: 30 VPTPKEIREVLDDYVIGQSQAKKVLSVAVHNHYKRLNHA--QKG--------------ND 73
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 74 VELAKSNIMLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 133
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 134 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 193
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR--ANMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + SSIGFGA V+ + R G
Sbjct: 194 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISGRGKGSSIGFGASVKDPEDRRTG----- 248
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL+ +GLIPEF+GR P+L +L L E LVK+LTEPKNAL
Sbjct: 249 ---EVLRDVEPDDLMKFGLIPEFIGRLPVLATLEDLDEVTLVKILTEPKNAL 297
>gi|325274290|ref|ZP_08140401.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
TJI-51]
gi|324100573|gb|EGB98308.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
TJI-51]
Length = 427
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 174/290 (60%), Positives = 219/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E LV++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALVQILTEPKNAL 334
>gi|312128164|ref|YP_003993038.1| ATP-dependent clp protease, ATP-binding subunit clpx
[Caldicellulosiruptor hydrothermalis 108]
gi|311778183|gb|ADQ07669.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Caldicellulosiruptor hydrothermalis 108]
Length = 433
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 162/290 (55%), Positives = 222/290 (76%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI + LD++V+GQ+ AKK+LSVAVYNHYKRIY+ + KK D+
Sbjct: 61 LPTPKEIKEFLDQYVVGQDHAKKILSVAVYNHYKRIYYHDTKK---------------DD 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 106 VELQKSNILMLGPTGSGKTYLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRLIQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G++YIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 166 NADYDIERAERGIIYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF +EK I +R + ++GF A V + + D
Sbjct: 226 RKHPHQEFIQIDTTNILFICGGAFEGIEKIIEKRIGEKTLGFNAKVESKKEKKIGD---- 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L + DL+ +G+IPEF+GR PI+V+L AL ++ L+K+LTEPKNAL
Sbjct: 282 --ILRQIMPQDLLKFGMIPEFIGRVPIIVTLDALDKEALIKILTEPKNAL 329
>gi|126733144|ref|ZP_01748891.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseobacter
sp. CCS2]
gi|126716010|gb|EBA12874.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseobacter
sp. CCS2]
Length = 421
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 165/301 (54%), Positives = 223/301 (74%), Gaps = 23/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G G+ +PTP EIC LD +VIGQ AK+VLSVAV+NHYKR+ HA
Sbjct: 52 TKTAGLKAGDGVPTPSEICGVLDDYVIGQMHAKRVLSVAVHNHYKRLNHAE--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN++L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 --------KSDIELAKSNIMLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VR +
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRED 274
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
G+ + +E DL+ +GLIPEFVGR P++ +LT L ED L+ +LT+PKNA
Sbjct: 275 DDRGI------GEIFTDLEPEDLLKFGLIPEFVGRLPVIATLTDLDEDALITILTKPKNA 328
Query: 550 L 550
L
Sbjct: 329 L 329
>gi|427724490|ref|YP_007071767.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Leptolyngbya
sp. PCC 7376]
gi|427356210|gb|AFY38933.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Leptolyngbya
sp. PCC 7376]
Length = 446
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 171/292 (58%), Positives = 216/292 (73%), Gaps = 13/292 (4%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
ED+P P+EI + LD+ VIGQ AKKVLSVAVYNHYKR+ EP AA
Sbjct: 77 EDIPKPREIKEYLDEHVIGQNDAKKVLSVAVYNHYKRLSLL----PDEEEPDPAA----- 127
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D +EL KSN+LL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 128 DGIELHKSNILLIGPTGCGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 187
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +
Sbjct: 188 LQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQ 247
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DTK+ILFICGGAFV L+K I R S+GF P G
Sbjct: 248 GGRKHPYQDCIQIDTKNILFICGGAFVGLDKVIERRVGKKSMGFVRP----GEEGSNKDQ 303
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T+ LL+ + S DL+ YG+IPEF GR P++ SL +L ED L+++LT+PKNAL
Sbjct: 304 RTAKLLQHLSSEDLVKYGMIPEFTGRIPVMASLNSLDEDTLIEILTQPKNAL 355
>gi|317486005|ref|ZP_07944860.1| ATP-dependent Clp protease [Bilophila wadsworthia 3_1_6]
gi|316922778|gb|EFV44009.1| ATP-dependent Clp protease [Bilophila wadsworthia 3_1_6]
Length = 418
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 222/292 (76%), Gaps = 19/292 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E L TP+EI LD++VIGQ++AKK+L+VAV+NHYKR+++A+ KG D
Sbjct: 58 ERLLTPQEIKARLDEYVIGQDEAKKILAVAVHNHYKRVFYADALKG-------------D 104
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VELEKSN+LL+GP+GSGKTLLAKTLAR + VPF IADATTLT+AGYVGEDVE+IL +L
Sbjct: 105 DGVELEKSNILLVGPSGSGKTLLAKTLARVLRVPFAIADATTLTEAGYVGEDVENILVQL 164
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++++EAA++G++YIDE+DKI++KA+ +I+RDVSGEGVQQALLK++EGT N+P K
Sbjct: 165 LQNADYDLEAARKGIIYIDEIDKISRKADGPSITRDVSGEGVQQALLKIIEGTEANIPPK 224
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + I+MDT +ILFI GGAF+ L+K + +R + S+GFGA V +
Sbjct: 225 GGRKHPQQEFIRMDTSNILFIVGGAFIGLDKIVEQRMRGGSMGFGAKVETKKERTL---- 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LLE V +DL+ +GLIPEFVGR P+L + L ED LV++LTEPKNAL
Sbjct: 281 --GELLEQVHPADLVQFGLIPEFVGRIPVLTHVDDLGEDDLVRILTEPKNAL 330
>gi|429333162|ref|ZP_19213867.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
CSV86]
gi|428762168|gb|EKX84377.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
CSV86]
Length = 427
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/290 (59%), Positives = 220/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISAILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I +R IGFGA VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSTRGGIGFGAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|374369271|ref|ZP_09627305.1| ATP-dependent protease ATP-binding subunit ClpX [Cupriavidus
basilensis OR16]
gi|373099184|gb|EHP40271.1| ATP-dependent protease ATP-binding subunit ClpX [Cupriavidus
basilensis OR16]
Length = 424
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/305 (55%), Positives = 219/305 (71%), Gaps = 22/305 (7%)
Query: 246 GGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGS 305
+ G++ DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K
Sbjct: 52 AAASDKDAGASAKSDLPTPHEIRESLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK--- 108
Query: 306 GAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAG 365
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AG
Sbjct: 109 -------------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAG 155
Query: 366 YVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
YVGEDVE+I+ KLL + VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALL
Sbjct: 156 YVGEDVENIIQKLLQNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALL 215
Query: 426 KMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 485
K++EGT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I +R + IGF A
Sbjct: 216 KLVEGTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKVIMQRSDKTGIGFAAQ 275
Query: 486 VRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTE 545
V++ + S +L VE DLI +GLIPE +GR P++ +L L E L+++L E
Sbjct: 276 VQSK------EEREASEVLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMQILVE 329
Query: 546 PKNAL 550
PKNAL
Sbjct: 330 PKNAL 334
>gi|414173787|ref|ZP_11428414.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia
broomeae ATCC 49717]
gi|410890421|gb|EKS38220.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia
broomeae ATCC 49717]
Length = 424
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 218/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ+ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQQHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISSRGRTTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL
Sbjct: 282 ---EIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNAL 330
>gi|256828015|ref|YP_003156743.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Desulfomicrobium baculatum DSM 4028]
gi|256577191|gb|ACU88327.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Desulfomicrobium baculatum DSM 4028]
Length = 416
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 166/292 (56%), Positives = 220/292 (75%), Gaps = 23/292 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI-YHANLKKGSGAEPKTAAAVDND 318
D+P P+EI LD +V+GQ+ AKK+LSVAVYNHYKRI YHA +K
Sbjct: 60 DIPLPQEIKAALDDYVVGQDDAKKILSVAVYNHYKRIKYHALVK---------------- 103
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL+KSN+LL+GPTGSGKTLLA+TLAR + VPF IADATTLT+AGYVGEDVE+IL +L
Sbjct: 104 DDVELDKSNILLIGPTGSGKTLLAQTLARILKVPFAIADATTLTEAGYVGEDVENILVQL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
+ A++N+E A +G++Y+DE+DKI++K++S +I+RDVSGEGVQQALLK++EGT+ N+P K
Sbjct: 164 VQNADYNLETAAKGIIYVDEIDKISRKSDSPSITRDVSGEGVQQALLKIIEGTVANIPPK 223
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + I++DT +ILFI GGAF+ L++ + +R Q SS+GFGA +R
Sbjct: 224 GGRKHPQQEFIRLDTSNILFIVGGAFIGLDEMVKQRVQGSSMGFGATMRRKQDDN----- 278
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T SLL+ V DLI +GLIPEF GR ++ SLT L ED L+++L EPKNAL
Sbjct: 279 -TDSLLKQVHPMDLIRFGLIPEFTGRISVITSLTELNEDDLMRILQEPKNAL 329
>gi|258542725|ref|YP_003188158.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-01]
gi|384042646|ref|YP_005481390.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-12]
gi|384051163|ref|YP_005478226.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-03]
gi|384054271|ref|YP_005487365.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-07]
gi|384057505|ref|YP_005490172.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-22]
gi|384060146|ref|YP_005499274.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-26]
gi|384063438|ref|YP_005484080.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-32]
gi|384119448|ref|YP_005502072.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256633803|dbj|BAH99778.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-01]
gi|256636862|dbj|BAI02831.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-03]
gi|256639915|dbj|BAI05877.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-07]
gi|256642971|dbj|BAI08926.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-22]
gi|256646026|dbj|BAI11974.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-26]
gi|256649079|dbj|BAI15020.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-32]
gi|256652066|dbj|BAI18000.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655123|dbj|BAI21050.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-12]
Length = 421
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/292 (57%), Positives = 222/292 (76%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EICK LD +VIGQ +AKKVLSVAV+NHYKR+ K G
Sbjct: 60 EGVPTPREICKVLDDYVIGQAQAKKVLSVAVHNHYKRLTQVA-KAG-------------- 104
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 105 -DVEIAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L +++NVE AQ+G+VYIDE+DKI+KK+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 164 LQASDYNVERAQRGIVYIDEIDKISKKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQ 223
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT ++LFICGGAF L+K IS R + ++IGFGA VRA D
Sbjct: 224 GGRKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGTNIGFGADVRA------PDER 277
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T +L VE DL+ +GLIPEF+GR P++ +L L E L+K+LTEPKNAL
Sbjct: 278 KTGEILHDVEPEDLMKFGLIPEFIGRLPVIATLGDLDEAALIKILTEPKNAL 329
>gi|253999169|ref|YP_003051232.1| ATP-dependent protease ATP-binding subunit ClpX [Methylovorus
glucosetrophus SIP3-4]
gi|253985848|gb|ACT50705.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylovorus
glucosetrophus SIP3-4]
Length = 423
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 218/291 (74%), Gaps = 19/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTPKEIC LD++VIGQ +AKK L+VAVYNHYKR+ + A + D
Sbjct: 61 DLPTPKEICNILDQYVIGQTQAKKNLAVAVYNHYKRLDQS--------------ATKDKD 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VE+ KSN+L++GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 EVEIAKSNILVIGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVGEDVENIMQKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ ++++E AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 QKCDYDIEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + +Q+DT +ILFICGGAF L+K I R + IGFGA V++ D
Sbjct: 227 GRKHPNQEFVQLDTTNILFICGGAFDGLDKIIRRRSEKGGIGFGAEVKSK-----DDLRE 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPEFVGR P + +L +L ED L+K+L EPKNAL
Sbjct: 282 VGEVLREVEPEDLIKFGLIPEFVGRLPAIATLESLDEDALMKILVEPKNAL 332
>gi|291518669|emb|CBK73890.1| endopeptidase Clp ATP-binding regulatory subunit (clpX)
[Butyrivibrio fibrisolvens 16/4]
Length = 428
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 171/291 (58%), Positives = 220/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+L P+++ LD++VIGQ++AKKVLSVAVYNHYKRI A P +D
Sbjct: 63 NLQKPEDMKAFLDQYVIGQDEAKKVLSVAVYNHYKRIM---------ANP-------DDI 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSNVL++GPTGSGKTLLA+TLAR + VPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 107 DVELQKSNVLMLGPTGSGKTLLAQTLARVLGVPFAIADATTLTEAGYVGEDVENILLKLI 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
AEF+++ A+ G+VYIDE+DKITKK+E+++I+RDVSGEGVQQALLK++EGT+ NVP +G
Sbjct: 167 QAAEFDIKKAEIGIVYIDEIDKITKKSENVSITRDVSGEGVQQALLKIIEGTVANVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ ++I +DTK+ILFICGGAF LEK IS+R S+IGFGA V+ +
Sbjct: 227 GRKHPQQETIAIDTKNILFICGGAFEGLEKIISQRTNVSAIGFGADVKDKNNQKI----- 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL+ D I YGLIPEF+GR PI VSL LTED ++++L EPKN+L
Sbjct: 282 -DELLQQALPQDFIKYGLIPEFIGRVPINVSLNELTEDDMIRILKEPKNSL 331
>gi|170720928|ref|YP_001748616.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
W619]
gi|229484079|sp|B1J693.1|CLPX_PSEPW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|169758931|gb|ACA72247.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
putida W619]
Length = 427
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 174/290 (60%), Positives = 219/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVLSVAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLSVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|398847903|ref|ZP_10604777.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM84]
gi|398250861|gb|EJN36153.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM84]
Length = 427
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 174/290 (60%), Positives = 219/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVLSVAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLSVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|377820659|ref|YP_004977030.1| ATP-dependent protease ATP-binding subunit [Burkholderia sp. YI23]
gi|413962706|ref|ZP_11401933.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia sp.
SJ98]
gi|357935494|gb|AET89053.1| ATP-dependent protease ATP-binding subunit [Burkholderia sp. YI23]
gi|413928538|gb|EKS67826.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia sp.
SJ98]
Length = 423
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI L+++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEISDILNQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
++EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DIELSKSNILLIGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILF+CGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFVCGGAFDGLEKVITDRTEKTGIGFGASVKSKQD---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPE +GR P++ +L L E LVK+L EPKNAL
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALVKILIEPKNAL 333
>gi|345887723|ref|ZP_08838887.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bilophila sp.
4_1_30]
gi|345041510|gb|EGW45657.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bilophila sp.
4_1_30]
Length = 418
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 223/292 (76%), Gaps = 19/292 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E L TP+EI LD++VIGQ++AKK+L+VAV+NHYKR+++A+ +GS
Sbjct: 58 ERLLTPQEIKARLDEYVIGQDEAKKILAVAVHNHYKRVFYADALRGS------------- 104
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VELEKSN+LL+GP+GSGKTLLAKTLAR + VPF IADATTLT+AGYVGEDVE+IL +L
Sbjct: 105 DDVELEKSNILLVGPSGSGKTLLAKTLARVLRVPFAIADATTLTEAGYVGEDVENILVQL 164
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++++EAA++G++YIDE+DKI++KA+ +I+RDVSGEGVQQALLK++EGT N+P K
Sbjct: 165 LQNADYDLEAARKGIIYIDEIDKISRKADGPSITRDVSGEGVQQALLKIIEGTEANIPPK 224
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + I+MDT +ILFI GGAF+ L+K + +R + S+GFGA V +
Sbjct: 225 GGRKHPQQEFIRMDTSNILFIVGGAFIGLDKIVEQRMRGGSMGFGAKVETKKERTL---- 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LLE V +DL+ +GLIPEFVGR P+L + L ED LV++LTEPKNAL
Sbjct: 281 --GELLEQVHPADLVQFGLIPEFVGRIPVLTHVDDLGEDDLVRILTEPKNAL 330
>gi|161524523|ref|YP_001579535.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
multivorans ATCC 17616]
gi|189350721|ref|YP_001946349.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
multivorans ATCC 17616]
gi|221198215|ref|ZP_03571261.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CGD2M]
gi|221209203|ref|ZP_03582195.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CGD2]
gi|221215058|ref|ZP_03588025.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CGD1]
gi|421469014|ref|ZP_15917511.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans ATCC BAA-247]
gi|421479612|ref|ZP_15927295.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CF2]
gi|238687053|sp|A9AJR1.1|CLPX_BURM1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|160341952|gb|ABX15038.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans ATCC 17616]
gi|189334743|dbj|BAG43813.1| ATP-dependent Clp protease ATP-binding subunit [Burkholderia
multivorans ATCC 17616]
gi|221164994|gb|EED97473.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CGD1]
gi|221170941|gb|EEE03396.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CGD2]
gi|221182147|gb|EEE14548.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CGD2M]
gi|400222688|gb|EJO53051.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CF2]
gi|400230739|gb|EJO60490.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans ATCC BAA-247]
Length = 423
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQD---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 285 --EVLRDVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>gi|127513435|ref|YP_001094632.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella loihica
PV-4]
gi|166215203|sp|A3QFX5.1|CLPX_SHELP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|126638730|gb|ABO24373.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
loihica PV-4]
Length = 426
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 172/291 (59%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQEKAKKVLSVAVYNHYKR+ +A PK D
Sbjct: 65 LPTPHELRAHLDDYVIGQEKAKKVLSVAVYNHYKRLKNAT--------PK--------DG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R + IGFGA V+ G D A
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRSHVGTGIGFGAEVK-----GEADKAT 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L VE DL+ YGLIPEF+GR P+L +L L E L+++L+EPKNAL
Sbjct: 284 ISDVLLQVEPEDLVKYGLIPEFIGRLPVLATLAELDEAALIQILSEPKNAL 334
>gi|421849602|ref|ZP_16282580.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus
NBRC 101655]
gi|421853138|ref|ZP_16285817.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371459663|dbj|GAB27783.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus
NBRC 101655]
gi|371478598|dbj|GAB31020.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 378
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/292 (57%), Positives = 222/292 (76%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EICK LD +VIGQ +AKKVLSVAV+NHYKR+ K G
Sbjct: 17 EGVPTPREICKVLDDYVIGQAQAKKVLSVAVHNHYKRLTQVA-KAG-------------- 61
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 62 -DVEIAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKL 120
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L +++NVE AQ+G+VYIDE+DKI+KK+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 121 LQASDYNVERAQRGIVYIDEIDKISKKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQ 180
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT ++LFICGGAF L+K IS R + ++IGFGA VRA D
Sbjct: 181 GGRKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGTNIGFGADVRA------PDER 234
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T +L VE DL+ +GLIPEF+GR P++ +L L E L+K+LTEPKNAL
Sbjct: 235 KTGEILHDVEPEDLMKFGLIPEFIGRLPVIATLGDLDEAALIKILTEPKNAL 286
>gi|456354944|dbj|BAM89389.1| ATP-dependent protease ATP-binding subunit ClpX [Agromonas
oligotrophica S58]
Length = 424
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 171/292 (58%), Positives = 216/292 (73%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHSD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LTEPKNAL
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDETSLKKILTEPKNAL 330
>gi|406939454|gb|EKD72472.1| hypothetical protein ACD_45C00667G0003 [uncultured bacterium]
Length = 422
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 216/292 (73%), Gaps = 25/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYK--RIYHANLKKGSGAEPKTAAAVDND 318
LPTP EICK LD++VIGQ AKK LSVAVYNHYK R H N
Sbjct: 63 LPTPAEICKILDEYVIGQSYAKKTLSVAVYNHYKKLRTKHKN------------------ 104
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KL
Sbjct: 105 NEIELNKSNILLVGPTGSGKTLLAETLARLLNVPFVIADATTLTEAGYVGEDVENIIQKL 164
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V AQ G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 165 LQKCDYDVAKAQTGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQ 224
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + IQ+DTK++LFICGGAF LEK I ER + S IGF A + + D+
Sbjct: 225 GGRKHPQQEFIQVDTKNMLFICGGAFAGLEKVIRERSERSGIGFSAEIHSK-----EDSK 279
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE +DLI +GLIPE +GR P++ +L L ++ LV++LTEPKNAL
Sbjct: 280 SIDQLLHEVEPADLIKFGLIPELIGRLPVVATLEELDKEALVRILTEPKNAL 331
>gi|329114675|ref|ZP_08243434.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acetobacter
pomorum DM001]
gi|326696155|gb|EGE47837.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acetobacter
pomorum DM001]
Length = 421
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/292 (57%), Positives = 222/292 (76%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EICK LD +VIGQ +AKKVLSVAV+NHYKR+ K G
Sbjct: 60 EGVPTPREICKVLDDYVIGQAQAKKVLSVAVHNHYKRLTQVA-KAG-------------- 104
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 105 -DVEIAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L +++NVE AQ+G+VYIDE+DKI+KK+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 164 LQASDYNVERAQRGIVYIDEIDKISKKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQ 223
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT ++LFICGGAF L+K IS R + ++IGFGA VRA D
Sbjct: 224 GGRKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGTNIGFGADVRA------PDER 277
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T +L VE DL+ +GLIPEF+GR P++ +L L E L+K+LTEPKNAL
Sbjct: 278 KTGEILHDVEPEDLMKFGLIPEFIGRLPVIATLGDLDEAALIKILTEPKNAL 329
>gi|308446478|ref|XP_003087188.1| hypothetical protein CRE_23295 [Caenorhabditis remanei]
gi|308260041|gb|EFP03994.1| hypothetical protein CRE_23295 [Caenorhabditis remanei]
Length = 436
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 222/290 (76%), Gaps = 17/290 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ + +G +PK D
Sbjct: 60 LPKPHEIRAALDQYVIGQDTAKKTLSVAVYNHYKRLKVSQ----TGHKPK--------DA 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 168 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ D+
Sbjct: 228 RKHPQQEFIQVDTANILFICGGAFSGLEKVVQQRQEKGGIGFTANVKNK-----DDSKKV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE++DL+ +GLIPEF+GR P++ +L L ++ L+++LTEPKNAL
Sbjct: 283 SELFRQVEAADLVKFGLIPEFIGRLPVIATLEELDQEALMQILTEPKNAL 332
>gi|363895294|ref|ZP_09322292.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Eubacteriaceae
bacterium ACC19a]
gi|361957732|gb|EHL11037.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Eubacteriaceae
bacterium ACC19a]
Length = 417
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/296 (56%), Positives = 223/296 (75%), Gaps = 21/296 (7%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
S+ DLP PKEI LD ++IGQE AKKVLSV++YNHYKRIYH + KKG+ E
Sbjct: 55 SSTSNDLPKPKEIKDFLDDYIIGQEAAKKVLSVSLYNHYKRIYHVD-KKGNKTE------ 107
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
L+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF IADATTLT+AGYVGEDVE+I
Sbjct: 108 --------LQKSNILLLGPTGSGKTLLAQTLAKIMDVPFAIADATTLTEAGYVGEDVENI 159
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
L KL+ A+FN+E AQ+G+VYIDE+DKIT+K+E+++I+RDVSGEGVQQALLK++EGT+ N
Sbjct: 160 LLKLIQAADFNIEKAQKGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKIIEGTLAN 219
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP + IQ+DT +I+FI GGAF +++ + +R + +GFG+ V +
Sbjct: 220 VPPQGGRKHPNQELIQIDTTNIMFIVGGAFEGIDEIVRKRLGKNVVGFGSKVVSK----- 274
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
D + ++V++ DL+ YGLIPEFVGR PI+VSL L E+ LVK+L EPKN+L
Sbjct: 275 -DTMKIGEIYKNVQTEDLLKYGLIPEFVGRLPIVVSLDPLDEEALVKILKEPKNSL 329
>gi|408373742|ref|ZP_11171436.1| ATP-dependent protease ATP-binding subunit ClpX [Alcanivorax
hongdengensis A-11-3]
gi|407766446|gb|EKF74889.1| ATP-dependent protease ATP-binding subunit ClpX [Alcanivorax
hongdengensis A-11-3]
Length = 427
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/297 (55%), Positives = 222/297 (74%), Gaps = 19/297 (6%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
G + E LP P EI LD++VIGQE+AKKVL+VAVYNHYKR+ + +KG
Sbjct: 58 GDSDSERLPKPNEIKTTLDEYVIGQERAKKVLAVAVYNHYKRLRSSTSRKG--------- 108
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+
Sbjct: 109 -----DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVEN 163
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
I+ KLL + +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 164 IIQKLLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVA 223
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 493
+VP +G RKHP+ + +Q+DT ++LFICGGAF L+K I +R + IGF A V++
Sbjct: 224 SVPPQGGRKHPQQEFLQVDTSNMLFICGGAFAGLDKVIRDRSEKGGIGFSAEVKSK---- 279
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
D+ L VE DL+ YGLIPEF+GR P++ +L L+ED LV++LTEP+NAL
Sbjct: 280 -DDSRNLGETLVDVEPEDLVKYGLIPEFIGRLPVIATLEELSEDALVQILTEPRNAL 335
>gi|313201271|ref|YP_004039929.1| ATP-dependent clp protease, ATP-binding subunit clpx [Methylovorus
sp. MP688]
gi|312440587|gb|ADQ84693.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylovorus
sp. MP688]
Length = 423
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 218/291 (74%), Gaps = 19/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTPKEIC LD++VIGQ +AKK L+VAVYNHYKR+ + A + D
Sbjct: 61 DLPTPKEICNILDQYVIGQTQAKKNLAVAVYNHYKRLDQS--------------ATKDKD 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VE+ KSN+L++GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 EVEIAKSNILVIGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVGEDVENIMQKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ ++++E AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 QKCDYDIEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + +Q+DT +ILFICGGAF L+K I R + IGFGA V++ D
Sbjct: 227 GRKHPNQEFVQLDTTNILFICGGAFDGLDKIIRRRSEKGGIGFGAEVKSK-----DDLRE 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPEFVGR P + +L +L ED L+K+L EPKNAL
Sbjct: 282 VGEVLREVEPEDLIKFGLIPEFVGRLPAIATLESLDEDALMKILVEPKNAL 332
>gi|209964555|ref|YP_002297470.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodospirillum
centenum SW]
gi|238066659|sp|B6ISY6.1|CLPX_RHOCS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|209958021|gb|ACI98657.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodospirillum centenum SW]
Length = 421
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/290 (58%), Positives = 222/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P++IC LD +VIGQE AK+VLSVAV+NHYKR+ H A ND
Sbjct: 63 VPSPRDICAVLDDYVIGQEHAKRVLSVAVHNHYKRLAHG--------------AKHND-- 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ I+ R + +SIGFGA VRA D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIIAARGKGTSIGFGADVRA------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL+ +GLIPEFVGR P++ +L L E+ L+++LT+PKNAL
Sbjct: 281 GDILREVEPEDLLKFGLIPEFVGRLPVVATLHDLDENALIEILTKPKNAL 330
>gi|302878842|ref|YP_003847406.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Gallionella
capsiferriformans ES-2]
gi|302581631|gb|ADL55642.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Gallionella
capsiferriformans ES-2]
Length = 416
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 216/291 (74%), Gaps = 23/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP PK+IC LD++VIGQE+AK++LSVAVYNHYKR+ + DD
Sbjct: 62 ELPVPKDICATLDEYVIGQERAKRILSVAVYNHYKRL-----------------KCNTDD 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 GVELAKSNILLVGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLL 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++NVE AQ+G++Y+DE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT ++P +G
Sbjct: 165 QACDYNVEKAQRGIIYVDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTKASIPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + +Q+DT +ILFICGGAF LEK I R +SIGFGA +R+ D
Sbjct: 225 GRKHPNTEFLQVDTTNILFICGGAFDGLEKVIRNRSSKASIGFGATIRS------VDERK 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T L VE DL+ +GLIPEFVGR P++ +L L E + ++LTEPKNAL
Sbjct: 279 TGETLRDVEPEDLVKFGLIPEFVGRLPVIATLEELDEAAMKQILTEPKNAL 329
>gi|71083580|ref|YP_266299.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus
Pelagibacter ubique HTCC1062]
gi|71062693|gb|AAZ21696.1| ATP-dependent clp proteinase regulatory chain X [Candidatus
Pelagibacter ubique HTCC1062]
Length = 422
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 220/290 (75%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEIC LD +VIGQ AKKVLSVAV+NHYKR+ + E KT+ V
Sbjct: 59 LPPPKEICAVLDDYVIGQPHAKKVLSVAVHNHYKRLNY---------ETKTSKTV----- 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 -ELSKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 164 AADYNVEKAQRGIVYIDEVDKISRKSENPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGFGA V+ TD T
Sbjct: 224 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISQRDKGTSIGFGANVKK------TDDKKT 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++++E DL+ YGLIPEF+GR P++ +L L E LVK+L EPKN+L
Sbjct: 278 GEWMKTLEPEDLLKYGLIPEFIGRLPMIATLEDLDEKSLVKILQEPKNSL 327
>gi|338981065|ref|ZP_08632301.1| ClpX [Acidiphilium sp. PM]
gi|338208031|gb|EGO95930.1| ClpX [Acidiphilium sp. PM]
Length = 375
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 164/292 (56%), Positives = 223/292 (76%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ+ AK++LSVAV+NHYKR+ HA +++
Sbjct: 19 VPTPREICKVLDDYVIGQDHAKRILSVAVHNHYKRLAHAQ----------------KNND 62
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 63 IEIAKSNIMLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 122
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 123 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 182
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR--ANMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S IGFGA VR R G
Sbjct: 183 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGADVRDPTEQRTG----- 237
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++L VE DL+ +GLIPEF+GR P++ +L L E L+++LT+PKNAL
Sbjct: 238 ---AILREVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNAL 286
>gi|363893164|ref|ZP_09320303.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Eubacteriaceae bacterium CM2]
gi|402838170|ref|ZP_10886682.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Eubacteriaceae bacterium OBRC8]
gi|361961688|gb|EHL14871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Eubacteriaceae bacterium CM2]
gi|402273674|gb|EJU22869.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Eubacteriaceae bacterium OBRC8]
Length = 417
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 222/291 (76%), Gaps = 21/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP PKEI LD+++IGQE AKKVLSV++YNHYKRIYH + KKG+
Sbjct: 60 DLPKPKEIKDFLDEYIIGQEAAKKVLSVSLYNHYKRIYHVD-KKGN-------------- 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 105 KTELQKSNILLLGPTGSGKTLLAQTLAKIMDVPFAIADATTLTEAGYVGEDVENILLKLI 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+FN+E AQ+G+VYIDE+DKIT+K+E+++I+RDVSGEGVQQALLK++EGT+ NVP +G
Sbjct: 165 QAADFNIEKAQKGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKIIEGTLANVPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +I+FI GGAF +++ + +R + +GFG+ V + D
Sbjct: 225 GRKHPNQELIQIDTTNIMFIVGGAFEGIDEIVRKRLGKNVVGFGSKVVSK------DTMK 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ ++V++ DL+ YGLIPEFVGR PI+VSL L E+ LVK+L EPKN+L
Sbjct: 279 IGEIYKNVQTEDLLKYGLIPEFVGRLPIVVSLDPLDEEALVKILKEPKNSL 329
>gi|254448887|ref|ZP_05062343.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [gamma
proteobacterium HTCC5015]
gi|198261577|gb|EDY85866.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [gamma
proteobacterium HTCC5015]
Length = 426
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/291 (56%), Positives = 217/291 (74%), Gaps = 21/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI + LD +VIGQE+AKKVLSVAVYNHYKR+ + +D
Sbjct: 64 NLPTPHEIKQRLDDYVIGQERAKKVLSVAVYNHYKRMESSQ----------------RND 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+EL KSN+LL+GPTGSGKTLLA+T+AR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 EIELSKSNILLIGPTGSGKTLLAETMARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++VE AQ+G+VYIDE+DK+++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QKCDYDVEKAQRGIVYIDEIDKVSRKADNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT +ILFICGGAF L+K I ER + IGF A V+ D
Sbjct: 228 GRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSEKGGIGFAAEVKTE-----EDDLA 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DL+ YGLIPEF+GR P++ +L L E+ L+++LT+PKNA+
Sbjct: 283 IGQLLHEVEPEDLVKYGLIPEFIGRLPVVATLEELGEEALIEILTQPKNAI 333
>gi|347525691|ref|YP_004832439.1| ATP-dependent protease ATP-binding subunit [Lactobacillus ruminis
ATCC 27782]
gi|345284650|gb|AEN78503.1| ATP-dependent protease ATP-binding subunit [Lactobacillus ruminis
ATCC 27782]
Length = 410
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 217/291 (74%), Gaps = 21/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+ TPKEI K L+++VIGQ +AKK L+VAVYNHYKRI A D ++
Sbjct: 60 DVLTPKEIVKTLNQYVIGQNEAKKTLAVAVYNHYKRI--------------NAMLEDENE 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+ EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 106 DTELQKSNICLIGPTGSGKTYLAQSLAKLLNVPFAIADATTLTEAGYVGEDVENILLKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE AQ+G++YIDE+DKI KK+E+++I+RDVSGEGVQQ+LLK+LEGTI NVP +G
Sbjct: 166 QNADYDVERAQRGIIYIDEIDKIAKKSENVSITRDVSGEGVQQSLLKILEGTIANVPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFI GGAF +EK + R D +IGFG R N
Sbjct: 226 GRKHPQQEFIQIDTTNILFIVGGAFDGIEKIVKNRLGDKTIGFGVEARKNYDE------- 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ SL++ + DL+ +GLIPEF+GR PI+ +L LTED LV++LTEPKNAL
Sbjct: 279 SKSLMQQIIPEDLLKFGLIPEFIGRLPIITALEKLTEDDLVRILTEPKNAL 329
>gi|323340666|ref|ZP_08080918.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
ruminis ATCC 25644]
gi|417974333|ref|ZP_12615154.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
ruminis ATCC 25644]
gi|323091789|gb|EFZ34409.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
ruminis ATCC 25644]
gi|346329330|gb|EGX97628.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
ruminis ATCC 25644]
Length = 410
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 217/291 (74%), Gaps = 21/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+ TPKEI K L+++VIGQ +AKK L+VAVYNHYKRI A D ++
Sbjct: 60 DVLTPKEIVKTLNQYVIGQNEAKKTLAVAVYNHYKRI--------------NAMLEDENE 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+ EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 106 DTELQKSNICLIGPTGSGKTYLAQSLAKLLNVPFAIADATTLTEAGYVGEDVENILLKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE AQ+G++YIDE+DKI KK+E+++I+RDVSGEGVQQ+LLK+LEGTI NVP +G
Sbjct: 166 QNADYDVERAQRGIIYIDEIDKIAKKSENVSITRDVSGEGVQQSLLKILEGTIANVPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFI GGAF +EK + R D +IGFG R N
Sbjct: 226 GRKHPQQEFIQIDTTNILFIVGGAFDGIEKIVKNRLGDKTIGFGVEARKNYDE------- 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ SL++ + DL+ +GLIPEF+GR PI+ +L LTED LV++LTEPKNAL
Sbjct: 279 SKSLMQQIIPEDLLKFGLIPEFIGRLPIITALEKLTEDDLVRILTEPKNAL 329
>gi|149916366|ref|ZP_01904886.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp.
AzwK-3b]
gi|149809820|gb|EDM69672.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp.
AzwK-3b]
Length = 420
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 219/290 (75%), Gaps = 23/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++IC LD +VIGQ AK+VLSVAV+NHYKR+ H+ ++
Sbjct: 63 VPTPQDICAVLDDYVIGQSMAKRVLSVAVHNHYKRLNHSG-----------------KND 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 166 SSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVAAVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L++ IS+R + S++GFGA VR DA T
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLDRIISQRGKGSAMGFGADVRD------VDARNT 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + +E DL+ +GLIPEFVGR P++ +L L E+ LV +LTEPKNAL
Sbjct: 280 GEVFKDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALVTILTEPKNAL 329
>gi|152980700|ref|YP_001353222.1| ATP-dependent protease ATP-binding subunit ClpX [Janthinobacterium
sp. Marseille]
gi|166214779|sp|A6SY75.1|CLPX_JANMA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|151280777|gb|ABR89187.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Janthinobacterium sp. Marseille]
Length = 422
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 216/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+E+C+ LD++VIGQ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 DLPTPQELCELLDQYVIGQNPAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARTLDVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVERAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +I+FICGGAF L K ISER + S IGF A V++ +
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKIISERSEKSGIGFSASVKSR------EERT 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S ++ E DLI +GLIPE VGR P++ +L L E+ L+++L EPKNAL
Sbjct: 282 ASQVMMDTEPEDLIKFGLIPELVGRLPVVATLRELDEEALIQILLEPKNAL 332
>gi|325294781|ref|YP_004281295.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065229|gb|ADY73236.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 411
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/307 (55%), Positives = 224/307 (72%), Gaps = 27/307 (8%)
Query: 246 GGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGS 305
G G + G + LPTPKEI + LD++V+GQE+AKKVLSVAVYNHYKRI
Sbjct: 47 GEGEKKKGAPVKVDKLPTPKEIKEFLDQYVVGQEEAKKVLSVAVYNHYKRI--------- 97
Query: 306 GAEPKTAAAVDNDDN--VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQ 363
+ N+D VELEKSN+LL+GPTGSGKTLLA++LA+ ++VPF IADATTLT+
Sbjct: 98 ---------MSNEDTSEVELEKSNILLIGPTGSGKTLLARSLAKLLDVPFAIADATTLTE 148
Query: 364 AGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQA 423
AGYVGEDVE+IL +L+ A+F++E A++G++YIDE+DKI++K+E+ +I+RDVSGEGVQQA
Sbjct: 149 AGYVGEDVENILLRLIQAADFDIEKAERGIIYIDEIDKISRKSENPSITRDVSGEGVQQA 208
Query: 424 LLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFG 483
LLK+LEGTI NVP +G RKHP IQ+DT +ILFICGGAFV LE I++R +GF
Sbjct: 209 LLKILEGTIANVPPQGGRKHPHQQYIQIDTSNILFICGGAFVGLEDIIAKRIGKGGMGFT 268
Query: 484 APVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVL 543
A V+ N S LL+ VE DL+ +GLIPE +GR P++ +L LTE+ L+++L
Sbjct: 269 ADVKRNKLE-------RSELLKHVEPDDLVKFGLIPELIGRLPVIATLNELTEEDLIRIL 321
Query: 544 TEPKNAL 550
EPKNAL
Sbjct: 322 KEPKNAL 328
>gi|409426235|ref|ZP_11260797.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
HYS]
Length = 427
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/290 (58%), Positives = 219/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISTILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQARSTRGGIGFGAEVRSKQEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|398353147|ref|YP_006398611.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
fredii USDA 257]
gi|390128473|gb|AFL51854.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
fredii USDA 257]
Length = 425
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 165/292 (56%), Positives = 222/292 (76%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI K LD++VIGQ++AK++LSVAV+NHYKR+ HA +
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAHAA----------------KSSD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA VRA + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRAPEDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 333
>gi|254252157|ref|ZP_04945475.1| ATP-dependent protease ATP-binding subunit [Burkholderia dolosa
AUO158]
gi|124894766|gb|EAY68646.1| ATP-dependent protease ATP-binding subunit [Burkholderia dolosa
AUO158]
Length = 423
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 217/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I +R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVIIDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L E DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 285 --EVLRETEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>gi|444369906|ref|ZP_21169611.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
cenocepacia K56-2Valvano]
gi|443598388|gb|ELT66752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
cenocepacia K56-2Valvano]
Length = 423
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L E DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 285 --EVLRETEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>gi|402566279|ref|YP_006615624.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
cepacia GG4]
gi|402247476|gb|AFQ47930.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
cepacia GG4]
Length = 423
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L E DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 285 --EVLRETEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>gi|89070384|ref|ZP_01157691.1| ATP-dependent protease ATP-binding subunit [Oceanicola granulosus
HTCC2516]
gi|89044031|gb|EAR50206.1| ATP-dependent protease ATP-binding subunit [Oceanicola granulosus
HTCC2516]
Length = 422
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/301 (55%), Positives = 225/301 (74%), Gaps = 23/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP+EIC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA+
Sbjct: 52 TKTSGLKSSDGVPTPREICEVLDDYVIGQMHAKRVLSVAVHNHYKRLNHAD--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 --------KSDIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VR
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDV 274
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + +S+E DL+ +GLIPEFVGR P++ +L L E+ LV +LT+PKNA
Sbjct: 275 EERGV------GEVFKSLEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALVTILTQPKNA 328
Query: 550 L 550
L
Sbjct: 329 L 329
>gi|409993261|ref|ZP_11276409.1| ATP-dependent protease ATP-binding subunit ClpX [Arthrospira
platensis str. Paraca]
gi|291568934|dbj|BAI91206.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Arthrospira
platensis NIES-39]
gi|409935885|gb|EKN77401.1| ATP-dependent protease ATP-binding subunit ClpX [Arthrospira
platensis str. Paraca]
Length = 456
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/296 (57%), Positives = 220/296 (74%), Gaps = 12/296 (4%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD--- 316
+LP P EI + LD+ VIGQ KKVLSVAVYNHYKR+ AE + D
Sbjct: 77 ELPKPVEIKQYLDQHVIGQNNTKKVLSVAVYNHYKRL-------SVDAENISNQGFDETQ 129
Query: 317 --NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
+D+ VEL+KSN+LLMGPTG GKTLLA++LA+ ++VPF +ADATTLT+AGYVG+DVE+I
Sbjct: 130 GYSDEQVELQKSNILLMGPTGCGKTLLAESLAKLLDVPFAVADATTLTEAGYVGDDVENI 189
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
L +LL A+F++EAAQQG+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+VN
Sbjct: 190 LLRLLQVADFDIEAAQQGIVYIDEIDKIARKSENTSITRDVSGEGVQQALLKILEGTVVN 249
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP D IQ+DT ILFICGGAFV L+K + +R S+GF P GV
Sbjct: 250 VPPQGGRKHPYQDFIQIDTSKILFICGGAFVGLDKVVEQRMGKKSLGFIQPGVKPEEEGV 309
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ ++ +L++VE DL+ +GLIPEF+GR P+L ++ L E+ LVK+LTEP NAL
Sbjct: 310 KTSVDSTEVLQNVEPQDLVKFGLIPEFIGRVPVLTVISPLDEEALVKILTEPHNAL 365
>gi|399520090|ref|ZP_10760871.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399111982|emb|CCH37430.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 426
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 216/290 (74%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKKVLSVAVYNHYKR+ D D+
Sbjct: 65 LPAPKEISAILDQYVIGQERAKKVLSVAVYNHYKRLNQR----------------DKKDD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATSLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ +
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFAGLEKVIQARSTKGGIGFGAEVRSKQEG----KKIG 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P++ +L L E LV++LTEPKNAL
Sbjct: 285 ESLRE-VEPDDLVKFGLIPEFVGRLPVIATLEELDEAALVQILTEPKNAL 333
>gi|15965009|ref|NP_385362.1| ATP-dependent protease ATP-binding subunit ClpX [Sinorhizobium
meliloti 1021]
gi|334315799|ref|YP_004548418.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sinorhizobium
meliloti AK83]
gi|384528968|ref|YP_005713056.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sinorhizobium
meliloti BL225C]
gi|384536771|ref|YP_005720856.1| ATP-dependent protease ATP-binding subunit [Sinorhizobium meliloti
SM11]
gi|407720200|ref|YP_006839862.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
meliloti Rm41]
gi|418402635|ref|ZP_12976143.1| ATP-dependent protease ATP-binding subunit ClpX [Sinorhizobium
meliloti CCNWSX0020]
gi|433613030|ref|YP_007189828.1| endopeptidase Clp ATP-binding regulatory subunit (clpX)
[Sinorhizobium meliloti GR4]
gi|21263475|sp|Q92QQ2.1|CLPX_RHIME RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|15074188|emb|CAC45835.1| Probable ATP-dependent CLP protease ATP-binding subunit
[Sinorhizobium meliloti 1021]
gi|333811144|gb|AEG03813.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sinorhizobium
meliloti BL225C]
gi|334094793|gb|AEG52804.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sinorhizobium
meliloti AK83]
gi|336033663|gb|AEH79595.1| ATP-dependent protease ATP-binding subunit [Sinorhizobium meliloti
SM11]
gi|359503376|gb|EHK75930.1| ATP-dependent protease ATP-binding subunit ClpX [Sinorhizobium
meliloti CCNWSX0020]
gi|407318432|emb|CCM67036.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
meliloti Rm41]
gi|429551220|gb|AGA06229.1| endopeptidase Clp ATP-binding regulatory subunit (clpX)
[Sinorhizobium meliloti GR4]
Length = 425
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 165/292 (56%), Positives = 222/292 (76%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI K LD++VIGQ++AK++LSVAV+NHYKR+ HA +
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAHAA----------------KSSD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA VRA + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRAPEDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 333
>gi|257455805|ref|ZP_05621031.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Enhydrobacter
aerosaccus SK60]
gi|257446819|gb|EEV21836.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Enhydrobacter
aerosaccus SK60]
Length = 427
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 172/311 (55%), Positives = 223/311 (71%), Gaps = 12/311 (3%)
Query: 240 GSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHA 299
GS G W L PTPKEI LD++VIGQ+KAKK L+VAVYNHYKR+ +
Sbjct: 50 GSDGSDTNERENWAARKL----PTPKEIRSHLDEYVIGQDKAKKTLAVAVYNHYKRLKVS 105
Query: 300 NLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADAT 359
+K S + T + D VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADAT
Sbjct: 106 --EKLSEDKALTTLGAE-DAMVELSKSNILLIGPTGSGKTLLAQTLARLLDVPFALADAT 162
Query: 360 TLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEG 419
TLT+AGYVGEDVE+I+ KLL AEF+VE AQ+G++YIDE+DKI++K+E+ +I+RDVSGEG
Sbjct: 163 TLTEAGYVGEDVENIVQKLLQAAEFDVERAQKGIIYIDEIDKISRKSENPSITRDVSGEG 222
Query: 420 VQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS 479
VQQALLK++EGT+ N+P +G RKHP + IQ+DT +IL ICGGAF L+ I +R + +
Sbjct: 223 VQQALLKLIEGTVANIPPQGGRKHPNQEMIQVDTSNILVICGGAFAGLDNVIQQRTEKTG 282
Query: 480 IGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQL 539
IGF A V+A T L + VE DLI +GLIPE +GR P++ +L L E+ L
Sbjct: 283 IGFNAEVKAK-----DSGKKTGELFKQVEPEDLIKFGLIPELIGRLPVVATLEELDEEAL 337
Query: 540 VKVLTEPKNAL 550
V++LTEPKNAL
Sbjct: 338 VQILTEPKNAL 348
>gi|114799276|ref|YP_760783.1| ATP-dependent protease ATP-binding subunit ClpX [Hyphomonas
neptunium ATCC 15444]
gi|123128702|sp|Q0C0G0.1|CLPX_HYPNA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|114739450|gb|ABI77575.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Hyphomonas
neptunium ATCC 15444]
Length = 420
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 217/290 (74%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ AK++LSVAV+NHYKR+ HA D
Sbjct: 64 VPTPQEICDVLDDYVIGQRYAKRILSVAVHNHYKRLSHAG----------------KTDG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELSKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIVLKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I+ R +++SIGFGA +++ GV D
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIAARGENASIGFGATIKSGEERGVGDT--- 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE DL +GLIPEF+GR P+L +L L E L+++LT+PKNAL
Sbjct: 285 ---LREVEPEDLQKFGLIPEFIGRLPVLATLEDLDEKALIQILTQPKNAL 331
>gi|149201012|ref|ZP_01877987.1| ATP-dependent protease ATP-binding subunit [Roseovarius sp. TM1035]
gi|149145345|gb|EDM33371.1| ATP-dependent protease ATP-binding subunit [Roseovarius sp. TM1035]
Length = 422
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/301 (55%), Positives = 222/301 (73%), Gaps = 23/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +P P++ICK LD +VIGQ +AKKVLSVAV+NHYKR+ ++
Sbjct: 52 TKTAGIKSSEGIPAPRDICKVLDDYVIGQARAKKVLSVAVHNHYKRLNNSG--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 --------KSDIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VR N
Sbjct: 215 GTVAAVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDN 274
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
DA + +E DL+ +GLIPEFVGR P++ +L L E+ LV +LT+PKNA
Sbjct: 275 ------DARGVGEIFTDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALVTILTQPKNA 328
Query: 550 L 550
L
Sbjct: 329 L 329
>gi|73541075|ref|YP_295595.1| ATP-dependent protease ATP-binding subunit ClpX [Ralstonia eutropha
JMP134]
gi|123760219|sp|Q472D2.1|CLPX_RALEJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|72118488|gb|AAZ60751.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Ralstonia
eutropha JMP134]
Length = 425
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 214/291 (73%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K D
Sbjct: 66 DLPTPHEIRESLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK----------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I +R + IGF A V++ V
Sbjct: 230 GRKHPNQDFLQVDTTNILFICGGAFDGLEKVIMQRSDKTGIGFAAQVQSKEEREV----- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L E DLI +GLIPE +GR P++ +L L E LV++L EPKNAL
Sbjct: 285 -SEVLPQTEPEDLIKFGLIPELIGRLPVVATLAKLDETALVQILIEPKNAL 334
>gi|91761999|ref|ZP_01263964.1| ATP-dependent clp proteinase regulatory chain X [Candidatus
Pelagibacter ubique HTCC1002]
gi|91717801|gb|EAS84451.1| ATP-dependent clp proteinase regulatory chain X [Candidatus
Pelagibacter ubique HTCC1002]
Length = 422
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 220/290 (75%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEIC LD +VIGQ AKKVLSVAV+NHYKR+ + E KT+ V
Sbjct: 59 LPPPKEICAVLDDYVIGQPHAKKVLSVAVHNHYKRLNY---------ETKTSKTV----- 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 -ELSKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 164 AADYNVEKAQRGIVYIDEVDKISRKSENPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGFGA V+ TD T
Sbjct: 224 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISQRDKGTSIGFGANVKK------TDDKKT 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++++E DL+ YGLIPEF+GR P++ +L L E LVK+L EPKN+L
Sbjct: 278 GEWMKTLEPEDLLKYGLIPEFIGRLPMIATLEDLDEKSLVKILQEPKNSL 327
>gi|300311894|ref|YP_003775986.1| ATP-dependent protease ATP-binding specificity subunit
[Herbaspirillum seropedicae SmR1]
gi|300074679|gb|ADJ64078.1| ATP-dependent protease (ATP-binding specificity subunit) protein
[Herbaspirillum seropedicae SmR1]
Length = 421
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 216/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+EI + LD++VIGQ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 DLPTPQEITELLDQYVIGQATAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +I+FICGGAF L + IS+R + S IGF A V++ +
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLARIISDRSEKSGIGFSASVKSQTQKS------ 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L + E DL+ +GLIPE VGR P++ +L L ED L+++L EPKNAL
Sbjct: 282 NSEVLLNAEPEDLVKFGLIPELVGRLPVIATLNELDEDALIQILIEPKNAL 332
>gi|255263549|ref|ZP_05342891.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thalassiobium
sp. R2A62]
gi|255105884|gb|EET48558.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thalassiobium
sp. R2A62]
Length = 422
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 167/301 (55%), Positives = 222/301 (73%), Gaps = 21/301 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPKEIC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA G
Sbjct: 52 TKTAGLKAADGVPTPKEICEVLDDYVIGQSHAKRVLSVAVHNHYKRLNHAAKSGG----- 106
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN++L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 107 ----------DIELAKSNIMLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFI GGAF L+K I++R + S++GFGA VR
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFIVGGAFAGLDKIIAQRGKGSAMGFGADVREK 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
G+ L +E DL+ +GLIPEFVGR P+L +L L ED L+ +LTEPKNA
Sbjct: 277 NDKGI------GELFLDLEPEDLLKFGLIPEFVGRLPVLATLQDLDEDALITILTEPKNA 330
Query: 550 L 550
L
Sbjct: 331 L 331
>gi|357384550|ref|YP_004899274.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pelagibacterium halotolerans B2]
gi|351593187|gb|AEQ51524.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pelagibacterium halotolerans B2]
Length = 425
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 164/292 (56%), Positives = 222/292 (76%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P +ICK LD +VIGQ +AK+VLSVAV+NHYKR++HA + +
Sbjct: 65 VPSPADICKVLDDYVIGQRRAKRVLSVAVHNHYKRLHHAT----------------KNQD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NV+ AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 AADYNVDKAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK I+ R ++SSIGF A V+ + R G
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLEKVIAARGENSSIGFTAAVKDPNDRRVG----- 283
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE D++ +GLIPEF+GR P++ +L L ED LV++L+EPKNAL
Sbjct: 284 ---DVLAEVEPEDMVRFGLIPEFIGRLPVIATLEDLDEDALVQILSEPKNAL 332
>gi|115351961|ref|YP_773800.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
ambifaria AMMD]
gi|170702051|ref|ZP_02892967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
ambifaria IOP40-10]
gi|171320791|ref|ZP_02909798.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
ambifaria MEX-5]
gi|172060887|ref|YP_001808539.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
ambifaria MC40-6]
gi|122322953|sp|Q0BEF7.1|CLPX_BURCM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238689158|sp|B1YRZ4.1|CLPX_BURA4 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|115281949|gb|ABI87466.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
ambifaria AMMD]
gi|170133037|gb|EDT01449.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
ambifaria IOP40-10]
gi|171093961|gb|EDT39075.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
ambifaria MEX-5]
gi|171993404|gb|ACB64323.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
ambifaria MC40-6]
Length = 423
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L E DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 285 --EVLRETEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>gi|310816209|ref|YP_003964173.1| ATP-dependent protease ATP-binding subunit [Ketogulonicigenium
vulgare Y25]
gi|385233714|ref|YP_005795056.1| ATP-dependent protease ATP-binding subunit [Ketogulonicigenium
vulgare WSH-001]
gi|308754944|gb|ADO42873.1| ATP-dependent protease ATP-binding subunit [Ketogulonicigenium
vulgare Y25]
gi|343462625|gb|AEM41060.1| ATP-dependent protease ATP-binding subunit [Ketogulonicigenium
vulgare WSH-001]
Length = 422
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/301 (55%), Positives = 224/301 (74%), Gaps = 21/301 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + + +PTP+EIC LD +VIGQ AK+VLSVAV+NHYKR+ HA
Sbjct: 52 TKSGSLKVKDGVPTPREICAVLDDYVIGQVHAKRVLSVAVHNHYKRLNHA---------- 101
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+++ +EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 102 -----AKSNNEIELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF LE+ I++R + +GF A VR
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLERIIAQRSKGQGMGFNANVREV 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + L +E DL+ +GLIPEFVGR P++ +LT L D L+++LTEPKNA
Sbjct: 277 DERGVGE------LFMELEPEDLLKFGLIPEFVGRLPVIATLTDLDVDALIQILTEPKNA 330
Query: 550 L 550
L
Sbjct: 331 L 331
>gi|148548676|ref|YP_001268778.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
F1]
gi|386012907|ref|YP_005931184.1| protein ClpX [Pseudomonas putida BIRD-1]
gi|395444304|ref|YP_006384557.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
ND6]
gi|397698113|ref|YP_006535996.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
putida DOT-T1E]
gi|421521991|ref|ZP_15968640.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
LS46]
gi|166214807|sp|A5W634.1|CLPX_PSEP1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|148512734|gb|ABQ79594.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
putida F1]
gi|313499613|gb|ADR60979.1| ClpX [Pseudomonas putida BIRD-1]
gi|388558301|gb|AFK67442.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
ND6]
gi|397334843|gb|AFO51202.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
putida DOT-T1E]
gi|402754252|gb|EJX14737.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
LS46]
Length = 427
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/290 (59%), Positives = 219/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|365174863|ref|ZP_09362301.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Synergistes
sp. 3_1_syn1]
gi|363613728|gb|EHL65233.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Synergistes
sp. 3_1_syn1]
Length = 440
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 220/291 (75%), Gaps = 20/291 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LP P EI + LD++VIGQ +AKKVLSVAVYNHYKR+ + + D
Sbjct: 80 DKLPKPAEIKEFLDQYVIGQAQAKKVLSVAVYNHYKRLLNPAV---------------GD 124
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL KSNVLL+GPTGSGKTLLA+TLA+ ++VPF + DATTLT+AGYVGEDVE+IL +L
Sbjct: 125 DDVELPKSNVLLVGPTGSGKTLLAQTLAKMLHVPFAMTDATTLTEAGYVGEDVENILLRL 184
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+F+++AA++G++YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGT+ N+P K
Sbjct: 185 LQAADFDIQAAERGIIYIDEIDKIARKSESTSITRDVSGEGVQQALLKIIEGTVANIPPK 244
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + I +DT +ILFICGGAF LEK IS+R + +GFG + +N+
Sbjct: 245 GGRKHPSQEMIPIDTSNILFICGGAFDGLEKIISQRTNEKQLGFGGEISSNV-----SKR 299
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
++ LL+ +E DL +YG IPEF+GR P+LV+L +L+ED LV++L EPKNA
Sbjct: 300 SSAELLKKLEPDDLRSYGFIPEFIGRLPVLVALESLSEDALVRILKEPKNA 350
>gi|78066692|ref|YP_369461.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia sp.
383]
gi|107028899|ref|YP_625994.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
cenocepacia AU 1054]
gi|116689943|ref|YP_835566.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
cenocepacia HI2424]
gi|170733281|ref|YP_001765228.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
cenocepacia MC0-3]
gi|206560358|ref|YP_002231122.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
cenocepacia J2315]
gi|416986796|ref|ZP_11938506.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia sp.
TJI49]
gi|421866866|ref|ZP_16298528.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Burkholderia
cenocepacia H111]
gi|444363687|ref|ZP_21164099.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
cenocepacia BC7]
gi|122977698|sp|Q1BH84.1|CLPX_BURCA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123756153|sp|Q39FE9.1|CLPX_BURS3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214761|sp|A0K846.1|CLPX_BURCH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238688580|sp|B1JTU9.1|CLPX_BURCC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238693098|sp|B4EBM2.1|CLPX_BURCJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|77967437|gb|ABB08817.1| ClpX, ATPase regulatory subunit [Burkholderia sp. 383]
gi|105898063|gb|ABF81021.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
cenocepacia AU 1054]
gi|116648032|gb|ABK08673.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
cenocepacia HI2424]
gi|169816523|gb|ACA91106.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
cenocepacia MC0-3]
gi|198036399|emb|CAR52295.1| ATP-dependent Clp protease ATP-binding subunit [Burkholderia
cenocepacia J2315]
gi|325518992|gb|EGC98515.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia sp.
TJI49]
gi|358073030|emb|CCE49406.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Burkholderia
cenocepacia H111]
gi|443594529|gb|ELT63172.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
cenocepacia BC7]
Length = 423
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L E DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 285 --EVLRETEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>gi|310829090|ref|YP_003961447.1| ATP-dependent Clp protease ATP-binding subunit clpX [Eubacterium
limosum KIST612]
gi|308740824|gb|ADO38484.1| ATP-dependent Clp protease ATP-binding subunit clpX [Eubacterium
limosum KIST612]
Length = 421
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 162/292 (55%), Positives = 220/292 (75%), Gaps = 21/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E++PTP+EI LD++VI Q +AK+ L+VAVYNHYKRI A +D+D
Sbjct: 58 ENVPTPREIKAKLDEYVISQHRAKRALAVAVYNHYKRI---------------NAMLDSD 102
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL+KSN++L+GPTGSGKTLLA+TLAR ++VPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct: 103 DDVELQKSNIILIGPTGSGKTLLAQTLARVLDVPFAIADATSLTEAGYVGEDVENILLKL 162
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI++K+++ +I+RDVSGEGVQQALLK+LEGT+ NVP +
Sbjct: 163 LQAADMDVERAQKGIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKILEGTVANVPPQ 222
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + IQ+DT +ILFICGGAF ++ I R + S+GF A ++ +D
Sbjct: 223 GGRKHPHQEFIQLDTSNILFICGGAFDGMDGVIERRMEKGSMGFSATIKT------SDEK 276
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL+++E DL+ YGLIPEF+GR P++ +L L E+ L+ +LTEPKNAL
Sbjct: 277 AKEELLDNIEPQDLLKYGLIPEFIGRIPVIATLQNLDEEALINILTEPKNAL 328
>gi|150396096|ref|YP_001326563.1| ATP-dependent protease ATP-binding subunit ClpX [Sinorhizobium
medicae WSM419]
gi|166215207|sp|A6U7U8.1|CLPX_SINMW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|150027611|gb|ABR59728.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sinorhizobium
medicae WSM419]
Length = 425
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 165/292 (56%), Positives = 222/292 (76%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI K LD++VIGQ++AK++LSVAV+NHYKR+ HA +
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAHAA----------------KSSD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA VRA + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRAPEDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 333
>gi|167032911|ref|YP_001668142.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
GB-1]
gi|189044143|sp|B0KJG7.1|CLPX_PSEPG RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166859399|gb|ABY97806.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
putida GB-1]
Length = 427
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/290 (59%), Positives = 219/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|86749682|ref|YP_486178.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris HaA2]
gi|123292611|sp|Q2IWZ3.1|CLPX_RHOP2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|86572710|gb|ABD07267.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Rhodopseudomonas palustris HaA2]
Length = 424
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 217/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNAL 330
>gi|170692396|ref|ZP_02883559.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
graminis C4D1M]
gi|170142826|gb|EDT10991.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
graminis C4D1M]
Length = 423
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 222/306 (72%), Gaps = 24/306 (7%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G G S DLP+P+EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H
Sbjct: 52 AAGAGIEAGLSK--SDLPSPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKH------ 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+D D +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+A
Sbjct: 104 ----------LDKKDEIELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEA 153
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQAL
Sbjct: 154 GYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 213
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF LEK I +R + + IGFGA
Sbjct: 214 LKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVIVDRTEKTGIGFGA 273
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V++ DA +L VE DLI +GLIPE +GR P++ +L L E L+K+L
Sbjct: 274 SVKSKQD---RDAG---EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILV 327
Query: 545 EPKNAL 550
EPKNAL
Sbjct: 328 EPKNAL 333
>gi|148259929|ref|YP_001234056.1| ATP-dependent protease ATP-binding subunit ClpX [Acidiphilium
cryptum JF-5]
gi|326403117|ref|YP_004283198.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acidiphilium
multivorum AIU301]
gi|254763827|sp|A5FX05.1|CLPX_ACICJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|146401610|gb|ABQ30137.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidiphilium
cryptum JF-5]
gi|325049978|dbj|BAJ80316.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acidiphilium
multivorum AIU301]
Length = 418
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 164/292 (56%), Positives = 223/292 (76%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ+ AK++LSVAV+NHYKR+ HA +++
Sbjct: 62 VPTPREICKVLDDYVIGQDHAKRILSVAVHNHYKRLAHAQ----------------KNND 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 IEIAKSNIMLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR--ANMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S IGFGA VR R G
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGADVRDPTEQRTG----- 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++L VE DL+ +GLIPEF+GR P++ +L L E L+++LT+PKNAL
Sbjct: 281 ---AILREVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNAL 329
>gi|254247969|ref|ZP_04941290.1| ClpX, ATPase regulatory subunit [Burkholderia cenocepacia PC184]
gi|124872745|gb|EAY64461.1| ClpX, ATPase regulatory subunit [Burkholderia cenocepacia PC184]
Length = 390
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 32 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 75
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 76 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 135
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 136 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 195
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 196 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 251
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L E DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 252 --EVLRETEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 300
>gi|56551845|ref|YP_162684.1| ATP-dependent protease ATP-binding subunit ClpX [Zymomonas mobilis
subsp. mobilis ZM4]
gi|260752593|ref|YP_003225486.1| ATP-dependent protease ATP-binding subunit ClpX [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
gi|384411290|ref|YP_005620655.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|61211394|sp|Q5NNY7.1|CLPX_ZYMMO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|56543419|gb|AAV89573.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Zymomonas
mobilis subsp. mobilis ZM4]
gi|258551956|gb|ACV74902.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|335931664|gb|AEH62204.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Zymomonas
mobilis subsp. mobilis ATCC 10988]
Length = 422
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 217/290 (74%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD++VIGQ KAK+VLSVAV+NHYKR+ H D +
Sbjct: 63 VPTPQEICTILDQYVIGQSKAKRVLSVAVHNHYKRLNHGG----------------KDAD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAETLARTFDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKIT+K+++ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKITRKSDNPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L++ I++R + SIGFGA V A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDRIIADRLEGKSIGFGAHVAA------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L+ E DL+ +GLIPEFVGR P+L +L L + LV++LTEPKNAL
Sbjct: 281 GEILQECEPEDLLKFGLIPEFVGRLPVLATLEDLDQSALVRILTEPKNAL 330
>gi|91775763|ref|YP_545519.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacillus
flagellatus KT]
gi|122985527|sp|Q1H1F9.1|CLPX_METFK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91709750|gb|ABE49678.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacillus flagellatus KT]
Length = 421
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 216/290 (74%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEIC LD++VIGQ +AKK L+VAVYNHYKR+ K D+
Sbjct: 63 LPTPKEICAILDQYVIGQTQAKKNLAVAVYNHYKRLEQGGQK----------------DD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+L++GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VEIAKSNILVIGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVGEDVENIMQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + +Q+DT +ILFICGGAF LEK I R + IGFGA V++ DA
Sbjct: 227 RKHPNQEFVQLDTTNILFICGGAFDGLEKIIRRRSEKGGIGFGAEVKSK-----EDARAI 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPEFVGR P + +L +L ED LV +L EPKNAL
Sbjct: 282 GEVLRDVEPEDLIKFGLIPEFVGRLPAIATLESLDEDALVTILVEPKNAL 331
>gi|167627760|ref|YP_001678260.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|167597761|gb|ABZ87759.1| ATP-dependent Clp protease subunit X [Francisella philomiragia
subsp. philomiragia ATCC 25017]
Length = 417
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 210/292 (71%), Gaps = 20/292 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LP P EI K LD ++IGQ+ KKVLSVAVYNHYKRI K D
Sbjct: 54 EKLPKPIEIKKYLDDYIIGQDNPKKVLSVAVYNHYKRITSNTTK---------------D 98
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+ EL+KSNVLL+GPTGSGKTL A+TLA+ +NVPF IADATTLT+AGYVG+DVE+I+ +L
Sbjct: 99 DDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPFAIADATTLTEAGYVGDDVENIIVRL 158
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+F+V AQ+G++YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGT+ +VP K
Sbjct: 159 LQNADFDVAKAQKGIIYIDEIDKIARKSESASITRDVSGEGVQQALLKLIEGTVSSVPPK 218
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT DILFICGGAF +EK + R SIGF A V ++
Sbjct: 219 GGRKHPNQDMIQVDTSDILFICGGAFAGIEKVVKHRMDKVSIGFNADVIQQ-----KNSL 273
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T L++ VES DL +GLIPE +GR PI+ L L E+ LVK+LTEPKNAL
Sbjct: 274 DTEKLMQKVESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVKILTEPKNAL 325
>gi|24373361|ref|NP_717404.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
oneidensis MR-1]
gi|46576583|sp|Q8EG18.1|CLPX_SHEON RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|24347624|gb|AAN54848.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
oneidensis MR-1]
Length = 426
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/291 (58%), Positives = 220/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +++ PK D
Sbjct: 65 LPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNSS--------PK--------DG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G D A
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKDKAT 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L+EPKNAL
Sbjct: 284 ISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNAL 334
>gi|338739741|ref|YP_004676703.1| ATP-dependent Clp protease, ATP-binding subunit [Hyphomicrobium sp.
MC1]
gi|337760304|emb|CCB66135.1| ATP-dependent Clp protease, ATP-binding subunit [Hyphomicrobium sp.
MC1]
Length = 416
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 220/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ AK+VLSVAV+NHYKR+ HA+ +++
Sbjct: 58 VPTPQEICGVLDSYVIGQNHAKRVLSVAVHNHYKRLNHAS----------------KNND 101
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 102 VELAKSNILLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 161
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 162 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 221
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + SSIGF A R D T
Sbjct: 222 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISRRGKGSSIGFQA------RVSGPDERRT 275
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +VE DL+ +GLIPEF+GR P++ +L L E LV++LTEPKNA+
Sbjct: 276 GEILRNVEPEDLLKFGLIPEFIGRLPVIATLEDLDESALVQILTEPKNAI 325
>gi|260892393|ref|YP_003238490.1| ATP-dependent protease ATP-binding subunit ClpX [Ammonifex degensii
KC4]
gi|260864534|gb|ACX51640.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ammonifex
degensii KC4]
Length = 420
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 215/291 (73%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTPKEI + LD++VIGQE AKK L+VAVYNHYKR++ D
Sbjct: 60 DLPTPKEIKEFLDQYVIGQEHAKKTLAVAVYNHYKRVHLGG----------------KID 103
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+L++GPTG GKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 104 DVELQKSNILMLGPTGCGKTLLAQTLARFLNVPFAIADATSLTEAGYVGEDVENILLKLV 163
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G+VYIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 164 QAADYDIEKAERGIVYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF +EK I R S+GFGA + +
Sbjct: 224 GRKHPHQEFIQIDTTNILFICGGAFEGIEKIIQNRISRKSMGFGAELVVQREQDL----- 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L + DL+ +GLIPEFVGR PI+V+L LTED LV++LTEP+NAL
Sbjct: 279 -GKILRQILPQDLLKFGLIPEFVGRLPIIVTLDPLTEDDLVRILTEPRNAL 328
>gi|365895291|ref|ZP_09433412.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. STM 3843]
gi|365424010|emb|CCE05954.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. STM 3843]
Length = 424
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 217/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQT----------------KHSD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LT+PKNAL
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTDPKNAL 330
>gi|417860287|ref|ZP_12505343.1| ATP-dependent protease ATP-binding subunit [Agrobacterium
tumefaciens F2]
gi|418296069|ref|ZP_12907913.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
tumefaciens CCNWGS0286]
gi|338823351|gb|EGP57319.1| ATP-dependent protease ATP-binding subunit [Agrobacterium
tumefaciens F2]
gi|355539501|gb|EHH08739.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
tumefaciens CCNWGS0286]
Length = 425
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/292 (56%), Positives = 224/292 (76%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP++I K LD++VIGQ++AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 64 EGVPTPQDIIKILDEYVIGQKQAKKILSVAVHNHYKRLAHAS-KNG-------------- 108
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 109 -DVELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQSADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 228 GGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAE------DDR 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 282 RVGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 333
>gi|134295957|ref|YP_001119692.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
vietnamiensis G4]
gi|387902476|ref|YP_006332815.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Burkholderia
sp. KJ006]
gi|166214767|sp|A4JF04.1|CLPX_BURVG RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|134139114|gb|ABO54857.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
vietnamiensis G4]
gi|387577368|gb|AFJ86084.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Burkholderia
sp. KJ006]
Length = 423
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGASVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L E DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 285 --EVLRETEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>gi|339486804|ref|YP_004701332.1| ATP-dependent protease, ATP-binding subunit ClpX [Pseudomonas
putida S16]
gi|431801809|ref|YP_007228712.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
HB3267]
gi|338837647|gb|AEJ12452.1| ATP-dependent protease, ATP-binding subunit ClpX [Pseudomonas
putida S16]
gi|430792574|gb|AGA72769.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
HB3267]
Length = 427
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/290 (59%), Positives = 219/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|335996828|ref|ZP_08562745.1| ATP-dependent protease ATP-binding subunit [Lactobacillus ruminis
SPM0211]
gi|335351898|gb|EGM53389.1| ATP-dependent protease ATP-binding subunit [Lactobacillus ruminis
SPM0211]
Length = 385
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 217/291 (74%), Gaps = 21/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+ TPKEI K L+++VIGQ +AKK L+VAVYNHYKRI A D ++
Sbjct: 35 DVLTPKEIVKTLNQYVIGQNEAKKTLAVAVYNHYKRI--------------NAMLEDENE 80
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+ EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 81 DTELQKSNICLIGPTGSGKTYLAQSLAKLLNVPFAIADATTLTEAGYVGEDVENILLKLL 140
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE AQ+G++YIDE+DKI KK+E+++I+RDVSGEGVQQ+LLK+LEGTI NVP +G
Sbjct: 141 QNADYDVERAQRGIIYIDEIDKIAKKSENVSITRDVSGEGVQQSLLKILEGTIANVPPQG 200
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFI GGAF +EK + R D +IGFG R N
Sbjct: 201 GRKHPQQEFIQIDTTNILFIVGGAFDGIEKIVKNRLGDKTIGFGVEARKNYDE------- 253
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ SL++ + DL+ +GLIPEF+GR PI+ +L LTED LV++LTEPKNAL
Sbjct: 254 SKSLMQQIIPEDLLKFGLIPEFIGRLPIITALEKLTEDDLVRILTEPKNAL 304
>gi|90423894|ref|YP_532264.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris BisB18]
gi|115524518|ref|YP_781429.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris BisA53]
gi|122296221|sp|Q07NN5.1|CLPX_RHOP5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|122476340|sp|Q215J1.1|CLPX_RHOPB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|90105908|gb|ABD87945.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodopseudomonas palustris BisB18]
gi|115518465|gb|ABJ06449.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodopseudomonas palustris BisA53]
Length = 424
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 217/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNAL 330
>gi|397676239|ref|YP_006517777.1| ATP-dependent Clp protease ATP-binding subunit clpX [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395396928|gb|AFN56255.1| ATP-dependent Clp protease ATP-binding subunit clpX [Zymomonas
mobilis subsp. mobilis ATCC 29191]
Length = 422
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 217/290 (74%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD++VIGQ KAK+VLSVAV+NHYKR+ H D +
Sbjct: 63 VPTPQEICTILDQYVIGQSKAKRVLSVAVHNHYKRLNHGG----------------KDAD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAETLARTFDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKIT+K+++ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKITRKSDNPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L++ I++R + SIGFGA V A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDRIIADRLEGKSIGFGAHVAA------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L+ E DL+ +GLIPEFVGR P+L +L L + LV++LTEPKNAL
Sbjct: 281 GEILQECEPEDLLKFGLIPEFVGRLPVLATLEDLDQSALVRILTEPKNAL 330
>gi|408785975|ref|ZP_11197715.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium lupini
HPC(L)]
gi|424910123|ref|ZP_18333500.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392846154|gb|EJA98676.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|408488164|gb|EKJ96478.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium lupini
HPC(L)]
Length = 425
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/292 (56%), Positives = 224/292 (76%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP++I K LD++VIGQ++AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 64 EGVPTPQDIIKILDEYVIGQKQAKKILSVAVHNHYKRLAHAS-KNG-------------- 108
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 109 -DVELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 228 GGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAE------DDR 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 282 RVGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 333
>gi|296446425|ref|ZP_06888369.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylosinus
trichosporium OB3b]
gi|296256060|gb|EFH03143.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylosinus
trichosporium OB3b]
Length = 420
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 221/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ +AK+VLSVAV+NHYKR+ HA K G +
Sbjct: 62 IPTPREICKVLDDYVIGQAQAKRVLSVAVHNHYKRLNHAT-KHG---------------D 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKT+LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VELAKSNILLIGPTGVGKTMLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VY+DE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 166 ASDYNVERAQRGIVYVDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGFGA V+A D T
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISSRGRGTSIGFGATVQA------PDERRT 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ V+ DL+ +GLIPEFVGR P++ +L L E+ L ++LTEPKNAL
Sbjct: 280 GDIFRHVQPEDLLKFGLIPEFVGRLPVIATLEDLDEEALKRILTEPKNAL 329
>gi|393776901|ref|ZP_10365195.1| ATP-dependent protease ATP-binding subunit ClpX [Ralstonia sp. PBA]
gi|392716258|gb|EIZ03838.1| ATP-dependent protease ATP-binding subunit ClpX [Ralstonia sp. PBA]
Length = 424
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 215/291 (73%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI + LD++VIGQ+ AKK+L+VAVYNHYKR+ H K D
Sbjct: 66 DLPTPHEIRQSLDQYVIGQDAAKKILAVAVYNHYKRLKHLGRK----------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I +R + IGFGA V++ +
Sbjct: 230 GRKHPNQDFLQVDTTNILFICGGAFDGLEKVIMQRSDKTGIGFGAEVQSK------EERE 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L VE DLI +GLIPE +GR P++ +L L E LV++L EPKNAL
Sbjct: 284 ASEVLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALVQILVEPKNAL 334
>gi|390571700|ref|ZP_10251937.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
terrae BS001]
gi|420250358|ref|ZP_14753577.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Burkholderia
sp. BT03]
gi|389936314|gb|EIM98205.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
terrae BS001]
gi|398061217|gb|EJL53015.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Burkholderia
sp. BT03]
Length = 423
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 222/306 (72%), Gaps = 24/306 (7%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G G S DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H
Sbjct: 52 AAGAGLETGLSK--SDLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH------ 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+D D++EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+A
Sbjct: 104 ----------LDKKDDIELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEA 153
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQAL
Sbjct: 154 GYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 213
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF LEK I +R + + IGFGA
Sbjct: 214 LKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVIVDRTEKTGIGFGA 273
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V++ DA +L VE DLI +GLIPE +GR P++ +L L E L+K+L
Sbjct: 274 SVKSKQD---RDAG---EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEVALMKILV 327
Query: 545 EPKNAL 550
EPKNAL
Sbjct: 328 EPKNAL 333
>gi|345017120|ref|YP_004819473.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermoanaerobacter wiegelii Rt8.B1]
gi|344032463|gb|AEM78189.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 424
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 221/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP PKEI + LD++VIGQEKAKK L+VAVYNHYKRI S +P D
Sbjct: 59 ELPKPKEIKEFLDQYVIGQEKAKKALAVAVYNHYKRI-------NSRIKP---------D 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 103 DVELQKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 163 QAADYDIEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF +EK I R S+GFGA V++ +
Sbjct: 223 GRKHPHQEFIQIDTTNILFICGGAFEGIEKIIESRIGKKSLGFGAEVQSRKEKDL----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L + DL+ +G+IPEF+GR PI+V+L L++D LV++LTEPKNAL
Sbjct: 278 -SEILSHIMPQDLLKFGMIPEFIGRVPIVVTLDPLSKDDLVRILTEPKNAL 327
>gi|167038049|ref|YP_001665627.1| ATP-dependent protease ATP-binding subunit ClpX [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116458|ref|YP_004186617.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|326391009|ref|ZP_08212558.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter ethanolicus JW 200]
gi|392940443|ref|ZP_10306087.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermoanaerobacter siderophilus SR4]
gi|238687678|sp|B0KBA3.1|CLPX_THEP3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166856883|gb|ABY95291.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319929549|gb|ADV80234.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|325992954|gb|EGD51397.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter ethanolicus JW 200]
gi|392292193|gb|EIW00637.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermoanaerobacter siderophilus SR4]
Length = 424
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 221/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP PKEI + LD++VIGQEKAKK L+VAVYNHYKRI S +P D
Sbjct: 59 ELPKPKEIKEFLDQYVIGQEKAKKALAVAVYNHYKRI-------NSRIKP---------D 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 103 DVELQKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 163 QAADYDIEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF +EK I R S+GFGA V++ +
Sbjct: 223 GRKHPHQEFIQIDTTNILFICGGAFEGIEKIIESRIGKKSLGFGAEVQSRKEKDL----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L + DL+ +G+IPEF+GR PI+V+L L++D LV++LTEPKNAL
Sbjct: 278 -SEILSHIMPQDLLKFGMIPEFIGRVPIVVTLDPLSKDDLVRILTEPKNAL 327
>gi|209885040|ref|YP_002288897.1| ATP-dependent protease ATP-binding subunit ClpX [Oligotropha
carboxidovorans OM5]
gi|337741328|ref|YP_004633056.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oligotropha
carboxidovorans OM5]
gi|386030344|ref|YP_005951119.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oligotropha
carboxidovorans OM4]
gi|229484078|sp|B6JGU8.1|CLPX_OLICO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|209873236|gb|ACI93032.1| ATP-dependent Clp protease [Oligotropha carboxidovorans OM5]
gi|336095412|gb|AEI03238.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oligotropha
carboxidovorans OM4]
gi|336098992|gb|AEI06815.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oligotropha
carboxidovorans OM5]
Length = 424
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 216/292 (73%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQAHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISSRGRTTSIGFAASVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E L K+L EPKNAL
Sbjct: 282 ---EIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNAL 330
>gi|398823689|ref|ZP_10582045.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. YR681]
gi|398225662|gb|EJN11928.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. YR681]
Length = 423
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 217/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGRSTSIGFAAQVMAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LTEPKNAL
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEVSLKKILTEPKNAL 330
>gi|91793846|ref|YP_563497.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella
denitrificans OS217]
gi|123060778|sp|Q12LA2.1|CLPX_SHEDO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91715848|gb|ABE55774.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
denitrificans OS217]
Length = 426
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/293 (56%), Positives = 221/293 (75%), Gaps = 22/293 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP E+ LD++VIGQ+KAKKVL+VAVYNHYKR+ + K+G
Sbjct: 63 DKLPTPHELRNHLDEYVIGQDKAKKVLAVAVYNHYKRLRNGTTKEG-------------- 108
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 109 --VELGKSNILLIGPTGSGKTLLAETLARSLNVPFAMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF LEK I +R + IGFGA V+ G D
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHTGTGIGFGAEVK-----GEQDK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A S +L VE DL+ YGLIPEF+GR P++ +LT L E L+++L++PKNAL
Sbjct: 282 ATISQILGQVEPEDLVKYGLIPEFIGRLPVVATLTELDESALIQILSQPKNAL 334
>gi|58580657|ref|YP_199673.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas oryzae
pv. oryzae KACC 10331]
gi|84622590|ref|YP_449962.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|384418135|ref|YP_005627495.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
oryzae pv. oryzicola BLS256]
gi|81311961|sp|Q5H433.1|CLPX_XANOR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123522986|sp|Q2P6Y9.1|CLPX_XANOM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|58425251|gb|AAW74288.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas oryzae
pv. oryzae KACC 10331]
gi|84366530|dbj|BAE67688.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|353461049|gb|AEQ95328.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
oryzae pv. oryzicola BLS256]
Length = 428
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 220/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ +AK+ L+VAVYNHYKRI + +D+
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRS----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R D+ IGFGA V+++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSER-----KQE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+
Sbjct: 285 VGKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAI 335
>gi|374262730|ref|ZP_09621293.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
drancourtii LLAP12]
gi|363536954|gb|EHL30385.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
drancourtii LLAP12]
Length = 396
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 219/290 (75%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI K LD++VIGQ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 36 LPSPKEISKFLDEYVIGQPHAKKVLSVAVYNHYKRLQHKS-----------------EDG 78
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 79 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 138
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 139 KCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 198
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER + SSIGF A ++ ++
Sbjct: 199 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSEKSSIGFS----AQLKNKKDNSEEI 254
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L +ES DLI YGLIPEFVGR P++ +L L + L+ +LT PKNAL
Sbjct: 255 SKVLSRLESDDLIKYGLIPEFVGRLPVVTTLQELDQGALIDILTNPKNAL 304
>gi|387824405|ref|YP_005823876.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
cf. novicida 3523]
gi|328676004|gb|AEB28679.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
cf. novicida 3523]
Length = 417
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 175/324 (54%), Positives = 219/324 (67%), Gaps = 25/324 (7%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R G+ ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRDGNICNECVSKCAEKIRSIGNTAAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI K DD+ EL+KSNVLL+GPTGSGKTL A+TLA
Sbjct: 82 VAVYNHYKRITSNPTK---------------DDDTELKKSNVLLIGPTGSGKTLFAQTLA 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT +ILFICGGAF
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTTNILFICGGAFAG 246
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK + R SIGF A V + TD L++ +ES DL +GLIPE +GR P
Sbjct: 247 IEKVVKHRMDKVSIGFNADVIQQKNSLDTD-----KLMQKIESEDLTRFGLIPELIGRLP 301
Query: 527 ILVSLTALTEDQLVKVLTEPKNAL 550
I+ L L E+ LV++LTEPKNAL
Sbjct: 302 IVTVLNELKEEDLVRILTEPKNAL 325
>gi|121997403|ref|YP_001002190.1| ATP-dependent protease ATP-binding subunit ClpX [Halorhodospira
halophila SL1]
gi|167009016|sp|A1WUM6.1|CLPX_HALHL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|121588808|gb|ABM61388.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Halorhodospira halophila SL1]
Length = 426
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 169/300 (56%), Positives = 223/300 (74%), Gaps = 21/300 (7%)
Query: 251 RWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPK 310
+ G + G LP P EI + LD++VIGQE AKKVLSVAVYNHYKR+ E +
Sbjct: 56 QEGAATEGGGLPRPHEINRELDQYVIGQEHAKKVLSVAVYNHYKRL-----------ESR 104
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
T+ D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGED
Sbjct: 105 TSQ-----DDVELTKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGED 159
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VE+I+ KLL + +++VE AQ G+VYIDE+DK+++KA++ +I+RDVSGEGVQQALLK++EG
Sbjct: 160 VENIIQKLLQKCDYDVEKAQHGIVYIDEIDKVSRKADNPSITRDVSGEGVQQALLKLIEG 219
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T +VP +G RKHP+ + +Q+DT ++LFICGGAF L+K I ER + IGF A ++
Sbjct: 220 TTASVPPQGGRKHPQQEFVQVDTSNMLFICGGAFAGLDKVIQERSERGGIGFSAEIK--- 276
Query: 491 RAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
G + A L++VE SDL+ YGLIPEFVGR P++ +L L ++ LV++L EPKNAL
Sbjct: 277 --GEGERASVGETLQTVEPSDLVRYGLIPEFVGRLPVIATLNELDQEALVQILREPKNAL 334
>gi|34498012|ref|NP_902227.1| ATP-dependent protease ATP-binding subunit ClpX [Chromobacterium
violaceum ATCC 12472]
gi|46576429|sp|Q7NUZ0.1|CLPX_CHRVO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|34103867|gb|AAQ60227.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Chromobacterium violaceum ATCC 12472]
Length = 426
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 168/305 (55%), Positives = 223/305 (73%), Gaps = 21/305 (6%)
Query: 246 GGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGS 305
G GG GG++ LPTP+EI LD+++IGQ+ AKK LSVAVYNHYKR+Y+ K
Sbjct: 53 GTGGEVIGGASADHPLPTPQEIRADLDQYIIGQDFAKKTLSVAVYNHYKRLYNKGGK--- 109
Query: 306 GAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAG 365
D+VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFVIADATTLT+AG
Sbjct: 110 -------------DDVELAKSNILLIGPTGSGKTLLAQSLARLLDVPFVIADATTLTEAG 156
Query: 366 YVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
YVGEDVE I+ KLL + +++V+ AQ+G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALL
Sbjct: 157 YVGEDVEHIIQKLLQKCDYDVDKAQRGIVYIDEIDKISRKSENPSITRDVSGEGVQQALL 216
Query: 426 KMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 485
K++EGT+ +VP +G RKHP + IQ+DT +ILFICGGAF L+K I +R + IGFGA
Sbjct: 217 KLIEGTVASVPPQGGRKHPNQEFIQVDTTNILFICGGAFDGLDKIIRQRSEKGGIGFGAE 276
Query: 486 VRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTE 545
V + D + L + VE D+I +GLIPE +GR P++ +L L E+ LV +LT+
Sbjct: 277 VSSK-----DDGKSLTKLFQEVEPQDIIRFGLIPELIGRLPVVATLEELDEEALVSILTQ 331
Query: 546 PKNAL 550
PKNAL
Sbjct: 332 PKNAL 336
>gi|339483338|ref|YP_004695124.1| ATP-dependent Clp protease ATP-binding subunit clpX [Nitrosomonas
sp. Is79A3]
gi|338805483|gb|AEJ01725.1| ATP-dependent Clp protease ATP-binding subunit clpX [Nitrosomonas
sp. Is79A3]
Length = 425
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/305 (54%), Positives = 222/305 (72%), Gaps = 23/305 (7%)
Query: 246 GGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGS 305
G ++ SNL P P+EIC+ LD++VIGQE AKK+LSVAVYNHYKR+
Sbjct: 52 GDDATKLVKSNL----PVPREICQILDQYVIGQESAKKILSVAVYNHYKRL--------- 98
Query: 306 GAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAG 365
K D+ D++EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF++ADAT LT+AG
Sbjct: 99 ----KNVTKSDDTDDIELSKSNILLVGPTGSGKTLLAQTLARLLDVPFIMADATALTEAG 154
Query: 366 YVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
YVGEDVE+I+ KLL + ++ E AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALL
Sbjct: 155 YVGEDVENIIQKLLQKCNYDAEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALL 214
Query: 426 KMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 485
K++EGTI VP +G RKHP + IQ+DT +ILFICGGAF L+K I R + IGFG
Sbjct: 215 KLIEGTIAMVPPQGGRKHPNQEFIQVDTTNILFICGGAFDGLDKVIRARTEKGGIGFGVD 274
Query: 486 VRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTE 545
V+ + R + + +L+ VE DL+ +GLIPEFVGR P++ +L L E L+++LTE
Sbjct: 275 VKNHTRKDM------NKVLQQVEPEDLVKFGLIPEFVGRLPVVATLEELNEAALIQILTE 328
Query: 546 PKNAL 550
PKNAL
Sbjct: 329 PKNAL 333
>gi|358450533|ref|ZP_09160991.1| ATP-dependent protease ATP-binding subunit ClpX [Marinobacter
manganoxydans MnI7-9]
gi|385331925|ref|YP_005885876.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Marinobacter
adhaerens HP15]
gi|311695075|gb|ADP97948.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Marinobacter
adhaerens HP15]
gi|357225182|gb|EHJ03689.1| ATP-dependent protease ATP-binding subunit ClpX [Marinobacter
manganoxydans MnI7-9]
Length = 427
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 223/290 (76%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD++VIGQ++AK VLSVAVYNHYKR+ + +G G +
Sbjct: 67 LPTPAEIRNTLDEYVIGQDRAKVVLSVAVYNHYKRLRYG---EGKG-------------D 110
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 VELGKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 170
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 KCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 230
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ++LFICGGAF L+K I ER + +SIGF A V A DA T
Sbjct: 231 RKHPQQEFLQVDTGNMLFICGGAFAGLDKVIRERTEKNSIGFSASV-----ASQDDAKNT 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+++ VE+ DL+ YGLIPEFVGR P++ +L L E+ LV++LTEPKN+L
Sbjct: 286 GDVIKDVETEDLVKYGLIPEFVGRLPVVATLNELDEEALVQILTEPKNSL 335
>gi|325292626|ref|YP_004278490.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Agrobacterium
sp. H13-3]
gi|418406779|ref|ZP_12980098.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
tumefaciens 5A]
gi|325060479|gb|ADY64170.1| ATP-dependent clp protease ATP-binding subunit ClpX [Agrobacterium
sp. H13-3]
gi|358007272|gb|EHJ99595.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
tumefaciens 5A]
Length = 425
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/292 (56%), Positives = 224/292 (76%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP++I K LD++VIGQ++AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 64 EGVPTPQDIIKILDEYVIGQKQAKKILSVAVHNHYKRLAHAS-KNG-------------- 108
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 109 -DVELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 228 GGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAE------DDR 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 282 RVGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 333
>gi|163851840|ref|YP_001639883.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
extorquens PA1]
gi|218530632|ref|YP_002421448.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
extorquens CM4]
gi|240139004|ref|YP_002963479.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens AM1]
gi|254561599|ref|YP_003068694.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens DM4]
gi|418060065|ref|ZP_12697993.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens DSM 13060]
gi|238687353|sp|A9W5F6.1|CLPX_METEP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763853|sp|B7KNT1.1|CLPX_METC4 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|163663445|gb|ABY30812.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium extorquens PA1]
gi|218522935|gb|ACK83520.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium extorquens CM4]
gi|240008976|gb|ACS40202.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens AM1]
gi|254268877|emb|CAX24838.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens DM4]
gi|373566383|gb|EHP92384.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens DSM 13060]
Length = 423
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 221/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA ++
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS+R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISQRGKGTSIGFGASVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ SVE DL+ +GLIPEFVGR P+L +L L E+ L K+L EPKNAL
Sbjct: 281 GEVFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALKKILQEPKNAL 330
>gi|134094957|ref|YP_001100032.1| ATP-dependent protease ATP-binding subunit ClpX [Herminiimonas
arsenicoxydans]
gi|166214778|sp|A4G5X0.1|CLPX_HERAR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|133738860|emb|CAL61907.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Herminiimonas
arsenicoxydans]
Length = 422
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 216/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+E+C+ LD++VIGQ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 DLPTPQELCELLDQYVIGQNSAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARTLDVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVERAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +I+FICGGAF L K ISER + S IGF A V++ +
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKIISERSEKSGIGFSATVKSR------EERS 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S ++ E DLI +GLIPE VGR P++ +L L E+ L+++L EPKNAL
Sbjct: 282 ASQVMLDTEPEDLIKFGLIPELVGRLPVVATLRELDEEALIQILLEPKNAL 332
>gi|225850860|ref|YP_002731094.1| ATP-dependent protease ATP-binding subunit ClpX [Persephonella
marina EX-H1]
gi|225645554|gb|ACO03740.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Persephonella
marina EX-H1]
Length = 411
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 215/291 (73%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI K LD++VIGQE+AKK+LSVAVYNHYKRI+H DD+
Sbjct: 58 LPTPAEIKKKLDEYVIGQERAKKILSVAVYNHYKRIFHPGRY--------------TDDD 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VELEKSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADAT +T+AGYVGEDVESIL +L+
Sbjct: 104 VELEKSNILLIGPTGSGKTLLARTLAKILNVPFAIADATNITEAGYVGEDVESILVRLVQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKA-ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDE+DKI KK+ E+ +I+RDVSGEGVQQALLK+LEGT+ N+P +G
Sbjct: 164 AADYDIEKAEKGIIYIDEIDKIAKKSGENPSITRDVSGEGVQQALLKILEGTVANIPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFI GGAFV LE I +R SIGF +R+
Sbjct: 224 GRKHPHQEFIQLDTSNILFILGGAFVGLEDIIKQRIGKKSIGFATQIRSKEEE------- 276
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++L V DLI +GLIPEF+GR P++ +L L ED LV+VLTEPKNAL
Sbjct: 277 EGNILSKVRVEDLIKFGLIPEFIGRIPVVATLDELDEDALVRVLTEPKNAL 327
>gi|15888589|ref|NP_354270.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
fabrum str. C58]
gi|335035105|ref|ZP_08528448.1| ATP-dependent protease ATP-binding subunit [Agrobacterium sp. ATCC
31749]
gi|23813866|sp|Q8UFY5.1|CLPX_AGRT5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|15156307|gb|AAK87055.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
fabrum str. C58]
gi|333793536|gb|EGL64890.1| ATP-dependent protease ATP-binding subunit [Agrobacterium sp. ATCC
31749]
Length = 425
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/292 (56%), Positives = 224/292 (76%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP++I K LD++VIGQ++AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 64 EGVPTPQDIIKILDEYVIGQKQAKKILSVAVHNHYKRLAHAS-KNG-------------- 108
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 109 -DVELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 228 GGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAE------DDR 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 282 RVGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 333
>gi|418520578|ref|ZP_13086626.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. malvacearum str. GSPB2388]
gi|410703463|gb|EKQ61954.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. malvacearum str. GSPB2388]
Length = 428
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 220/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ +AK+ L+VAVYNHYKRI + +D+
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRS----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R D+ IGFGA V+++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSER-----KQE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+
Sbjct: 285 VGKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAI 335
>gi|402771335|ref|YP_006590872.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylocystis
sp. SC2]
gi|401773355|emb|CCJ06221.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylocystis
sp. SC2]
Length = 421
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 221/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ +AK+VLSVAV+NHYKR+ HA K G +
Sbjct: 63 IPTPREICKVLDDYVIGQSQAKRVLSVAVHNHYKRLNHAT-KHG---------------D 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKT+LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGVGKTMLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VY+DE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYVDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R +++SIGF A V++ D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRNTSIGFAATVQS------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ V+ DL+ +GLIPEFVGR P++ +L L ED L ++LTEPKNAL
Sbjct: 281 GDIFRQVQPEDLLKFGLIPEFVGRLPVIATLEDLDEDALKRILTEPKNAL 330
>gi|21241839|ref|NP_641421.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. citri str. 306]
gi|78046638|ref|YP_362813.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|289664184|ref|ZP_06485765.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. vasculorum NCPPB 702]
gi|289668775|ref|ZP_06489850.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. musacearum NCPPB 4381]
gi|294627914|ref|ZP_06706493.1| ATP-dependent protease ATP-binding subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|294666561|ref|ZP_06731802.1| ATP-dependent protease ATP-binding subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|325914925|ref|ZP_08177257.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
vesicatoria ATCC 35937]
gi|325927442|ref|ZP_08188689.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
perforans 91-118]
gi|346723959|ref|YP_004850628.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. citrumelo F1]
gi|381170419|ref|ZP_09879576.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
citri pv. mangiferaeindicae LMG 941]
gi|390990706|ref|ZP_10260987.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|418517008|ref|ZP_13083176.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. malvacearum str. GSPB1386]
gi|23813860|sp|Q8PNI4.1|CLPX_XANAC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123585731|sp|Q3BWQ0.1|CLPX_XANC5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|21107219|gb|AAM35957.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
axonopodis pv. citri str. 306]
gi|78035068|emb|CAJ22713.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|292597828|gb|EFF41986.1| ATP-dependent protease ATP-binding subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292603705|gb|EFF47115.1| ATP-dependent protease ATP-binding subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|325538818|gb|EGD10482.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
vesicatoria ATCC 35937]
gi|325542192|gb|EGD13687.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
perforans 91-118]
gi|346648706|gb|AEO41330.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. citrumelo F1]
gi|372554559|emb|CCF67962.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|380689080|emb|CCG36063.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
citri pv. mangiferaeindicae LMG 941]
gi|410706221|gb|EKQ64683.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. malvacearum str. GSPB1386]
Length = 428
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 220/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ +AK+ L+VAVYNHYKRI + +D+
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRS----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R D+ IGFGA V+++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSER-----KQE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+
Sbjct: 285 VGKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAI 335
>gi|256752436|ref|ZP_05493295.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter ethanolicus CCSD1]
gi|256748705|gb|EEU61750.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter ethanolicus CCSD1]
Length = 424
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 221/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP PKEI + LD++VIGQEKAKK L+VAVYNHYKRI S +P D
Sbjct: 59 ELPKPKEIKEFLDQYVIGQEKAKKALAVAVYNHYKRI-------NSRIKP---------D 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 103 DVELQKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 163 QAADYDIEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF +EK I R S+GFGA V++ +
Sbjct: 223 GRKHPHQEFIQIDTTNILFICGGAFEGIEKIIESRIGKKSLGFGAEVQSRKEKDL----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L + DL+ +G+IPEF+GR PI+V+L L++D LV++LTEPKNAL
Sbjct: 278 -SEILSHIMPQDLLKFGMIPEFIGRVPIVVTLDPLSKDDLVRILTEPKNAL 327
>gi|23014985|ref|ZP_00054777.1| COG1219: ATP-dependent protease Clp, ATPase subunit
[Magnetospirillum magnetotacticum MS-1]
Length = 422
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 169/290 (58%), Positives = 217/290 (74%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPK+IC+ LD +VIGQ AKKVLSVAV+NHYKR+ H N++
Sbjct: 63 VPTPKDICQVLDDYVIGQGHAKKVLSVAVHNHYKRLQHGG---------------KNNNE 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
AE+NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 AAEYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I R + +SIGFGA VR D T
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFSGLEKIIGSRGRGTSIGFGADVRG------PDERRT 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL+ +GLIPEFVGR P+L +L L D L+ +L++PKNAL
Sbjct: 282 GEILREVEPEDLLKFGLIPEFVGRLPVLATLEDLDVDALIDILSKPKNAL 331
>gi|91783521|ref|YP_558727.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
xenovorans LB400]
gi|123358810|sp|Q13Z14.1|CLPX_BURXL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91687475|gb|ABE30675.1| ClpX, ATPase regulatory subunit [Burkholderia xenovorans LB400]
Length = 423
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 222/306 (72%), Gaps = 24/306 (7%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G G S DLP+P+EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H
Sbjct: 52 AAGAGIEAGLSK--SDLPSPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKH------ 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+D D +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+A
Sbjct: 104 ----------LDKKDEIELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEA 153
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQAL
Sbjct: 154 GYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 213
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF LEK I +R + + IGFGA
Sbjct: 214 LKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVIVDRTEKTGIGFGA 273
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V++ DA +L VE DLI +GLIPE +GR P++ +L L E L+K+L
Sbjct: 274 SVKSKQD---RDAG---EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEVALMKILV 327
Query: 545 EPKNAL 550
EPKNAL
Sbjct: 328 EPKNAL 333
>gi|260426453|ref|ZP_05780432.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Citreicella
sp. SE45]
gi|260420945|gb|EEX14196.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Citreicella
sp. SE45]
Length = 421
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 167/301 (55%), Positives = 225/301 (74%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +P+P+EIC LD +VIGQ AK+VLSVAV+NHYKR+ H+ +K S
Sbjct: 52 TKGAGLKSSEGVPSPREICDVLDDYVIGQMMAKRVLSVAVHNHYKRLNHS--QKSS---- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + S++GFGA VR
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAMGFGADVREP 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
G T + + +E DL+ +GLIPEFVGR P++ +L L ED LV +LT+PKNA
Sbjct: 276 DERG------TGEVFKDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILTQPKNA 329
Query: 550 L 550
L
Sbjct: 330 L 330
>gi|188581624|ref|YP_001925069.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
populi BJ001]
gi|238692872|sp|B1Z9C8.1|CLPX_METPB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|179345122|gb|ACB80534.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium populi BJ001]
Length = 423
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 221/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA ++
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS+R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISQRGKGTSIGFGASVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ SVE DL+ +GLIPEFVGR P+L +L L E+ L K+L EPKNAL
Sbjct: 281 GEVFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALKKILQEPKNAL 330
>gi|187923897|ref|YP_001895539.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
phytofirmans PsJN]
gi|385209689|ref|ZP_10036557.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Burkholderia
sp. Ch1-1]
gi|238689607|sp|B2T404.1|CLPX_BURPP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|187715091|gb|ACD16315.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
phytofirmans PsJN]
gi|385182027|gb|EIF31303.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Burkholderia
sp. Ch1-1]
Length = 423
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 222/306 (72%), Gaps = 24/306 (7%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G G S DLP+P+EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H
Sbjct: 52 AAGAGIEAGLSK--SDLPSPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKH------ 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+D D +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+A
Sbjct: 104 ----------LDKKDEIELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEA 153
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQAL
Sbjct: 154 GYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 213
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF LEK I +R + + IGFGA
Sbjct: 214 LKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVIVDRTEKTGIGFGA 273
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V++ DA +L VE DLI +GLIPE +GR P++ +L L E L+K+L
Sbjct: 274 SVKSKQD---RDAG---EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEVALMKILV 327
Query: 545 EPKNAL 550
EPKNAL
Sbjct: 328 EPKNAL 333
>gi|304311291|ref|YP_003810889.1| ATP-dependent Clp protease ATP-binding subunit [gamma
proteobacterium HdN1]
gi|301797024|emb|CBL45237.1| ATP-dependent Clp protease ATP-binding subunit [gamma
proteobacterium HdN1]
Length = 434
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 170/300 (56%), Positives = 221/300 (73%), Gaps = 20/300 (6%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
N + LP+PKEI LD +VIGQ++AKK+L+VAVYNHYKRI N K G
Sbjct: 60 ADNKSDRLPSPKEIKTILDDYVIGQDRAKKILAVAVYNHYKRIRSGNAKSAKGR------ 113
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
+ ++EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+
Sbjct: 114 ---GEGDIELSKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVEN 170
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
I+ KLL + +++VE AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 171 IIQKLLQKCDYDVEKAQVGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVA 230
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA---NM 490
+VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I R S IGF A V++ N+
Sbjct: 231 SVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKVIQNRSTKSGIGFVASVKSKEDNI 290
Query: 491 RAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
G T L+ VE DL+ +GLIPEFVGR PI+ +L L E LV++LTEP+N+L
Sbjct: 291 NVGDT--------LKEVEPEDLVKFGLIPEFVGRLPIIATLEELDEAALVRILTEPRNSL 342
>gi|167040914|ref|YP_001663899.1| ATP-dependent protease ATP-binding subunit ClpX [Thermoanaerobacter
sp. X514]
gi|300914950|ref|ZP_07132266.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter sp. X561]
gi|307723816|ref|YP_003903567.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter sp. X513]
gi|238687634|sp|B0K532.1|CLPX_THEPX RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166855154|gb|ABY93563.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter sp. X514]
gi|300889885|gb|EFK85031.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter sp. X561]
gi|307580877|gb|ADN54276.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter sp. X513]
Length = 424
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 221/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP PKEI + LD++VIGQEKAKK L+VAVYNHYKRI S +P D
Sbjct: 59 ELPKPKEIKEFLDQYVIGQEKAKKALAVAVYNHYKRI-------NSRIKP---------D 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 103 DVELQKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 163 QAADYDIEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF +EK I R S+GFGA V++ +
Sbjct: 223 GRKHPHQEFIQIDTTNILFICGGAFEGIEKIIESRIGKKSLGFGAEVQSRKEKDL----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L + DL+ +G+IPEF+GR PI+V+L L++D LV++LTEPKNAL
Sbjct: 278 -SEILSHIMPQDLLKFGMIPEFIGRVPIVVTLDPLSKDDLVRILTEPKNAL 327
>gi|114563761|ref|YP_751274.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella
frigidimarina NCIMB 400]
gi|122299289|sp|Q07ZX9.1|CLPX_SHEFN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|114335054|gb|ABI72436.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
frigidimarina NCIMB 400]
Length = 426
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 220/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ K LD +VIGQ++AKKVL+VAVYNHYKR+ + +K D
Sbjct: 65 LPTPHELRKHLDDYVIGQDQAKKVLAVAVYNHYKRLRNGAIK----------------DG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLLGPTGSGKTLLAETLARSLNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE A++G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAERGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R + IGFGA V+ G D A
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHTGTGIGFGAEVK-----GEADKAT 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L VE DL+ +GLIPEF+GR P++ +LT L E LV++L+EPKNAL
Sbjct: 284 ISQILSQVEPGDLVKFGLIPEFIGRLPVVATLTELDEAALVQILSEPKNAL 334
>gi|339325653|ref|YP_004685346.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cupriavidus
necator N-1]
gi|338165810|gb|AEI76865.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cupriavidus
necator N-1]
Length = 425
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 215/291 (73%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K D
Sbjct: 66 DLPTPHEIRESLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK----------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I +R + IGF A V++ D
Sbjct: 230 GRKHPNQDFLQVDTTNILFICGGAFDGLEKVIMQRSDKTGIGFAAQVKSK------DERD 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L E DLI +GLIPE +GR P++ +L+ L E L+++L EPKNAL
Sbjct: 284 ASEVLPQTEPEDLIKFGLIPELIGRLPVVATLSKLDEAALMQILVEPKNAL 334
>gi|26989025|ref|NP_744450.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
KT2440]
gi|38257486|sp|Q88KI9.1|CLPX_PSEPK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|24983848|gb|AAN67914.1|AE016423_9 ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
putida KT2440]
Length = 442
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 173/290 (59%), Positives = 219/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 80 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 124
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 125 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 184
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 185 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 244
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ V
Sbjct: 245 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEG----KKVG 300
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 301 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 349
>gi|119384011|ref|YP_915067.1| ATP-dependent protease ATP-binding subunit ClpX [Paracoccus
denitrificans PD1222]
gi|166214797|sp|A1B1H7.1|CLPX_PARDP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|119373778|gb|ABL69371.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Paracoccus
denitrificans PD1222]
Length = 421
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 164/293 (55%), Positives = 224/293 (76%), Gaps = 23/293 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ +PTP+EIC LD +VIGQE AK+VLSVAV+NHYKR+ H++ KT
Sbjct: 60 GDGVPTPREICNVLDDYVIGQEHAKRVLSVAVHNHYKRLNHSS---------KT------ 104
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 105 --DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILK 162
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 163 LLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPP 222
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + +++GFGA V+ + GV
Sbjct: 223 QGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRNKGTAMGFGAAVKEDDDKGV--- 279
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L + +E DL+ +GLIPEFVGR P++ +L L E L+ +LT+PKNAL
Sbjct: 280 ---GELFKQLEPEDLLKFGLIPEFVGRLPVIATLGDLDEQALITILTQPKNAL 329
>gi|414162391|ref|ZP_11418638.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia felis
ATCC 53690]
gi|410880171|gb|EKS28011.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia felis
ATCC 53690]
Length = 424
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 216/292 (73%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISSRGRTTSIGFAASVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E L K+L EPKNAL
Sbjct: 282 ---EIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNAL 330
>gi|386313268|ref|YP_006009433.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
putrefaciens 200]
gi|319425893|gb|ADV53967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
putrefaciens 200]
Length = 426
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 170/293 (58%), Positives = 221/293 (75%), Gaps = 22/293 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +++ PK
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNSS--------PK-------- 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G D
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKDK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL
Sbjct: 282 ATISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNAL 334
>gi|428223755|ref|YP_007107852.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Geitlerinema
sp. PCC 7407]
gi|427983656|gb|AFY64800.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Geitlerinema
sp. PCC 7407]
Length = 445
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 223/304 (73%), Gaps = 22/304 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+R +LG+ +P P+EI K LD+ VIGQE AKK+LSVAVYNHYKR+ + KG G
Sbjct: 70 TRSSNLSLGQ-MPKPQEIKKYLDEHVIGQESAKKILSVAVYNHYKRLSYIQ-GKGKG--- 124
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D DD VEL+KSN+LL+GPTG GKTLLA+TLA ++VPF +ADATTLT+AGYVGE
Sbjct: 125 ------DFDDAVELQKSNILLIGPTGCGKTLLAQTLAEILDVPFAVADATTLTEAGYVGE 178
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+IL +LL A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLE
Sbjct: 179 DVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLE 238
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGF---GAPV 486
GT+ NVP +G RKHP D IQ+DT +ILFICGGAFV LEK++ +R SIGF P+
Sbjct: 239 GTVANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLEKSVEQRIGKKSIGFVQPNDPM 298
Query: 487 RANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEP 546
RA + +L+ +E DL+ +G+IPEF+GR PI+ L L ED L ++LTEP
Sbjct: 299 SKEKRA--------ADVLKHLEPDDLVKFGMIPEFIGRVPIVAVLDPLDEDALTEILTEP 350
Query: 547 KNAL 550
+NAL
Sbjct: 351 RNAL 354
>gi|408379475|ref|ZP_11177069.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
albertimagni AOL15]
gi|407746959|gb|EKF58481.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
albertimagni AOL15]
Length = 425
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 223/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ++AKK+LSVAV+NHYKR+ HA+ KG +
Sbjct: 66 VPTPQDIIKILDEYVIGQKQAKKILSVAVHNHYKRLSHAS--KGG--------------D 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAE------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 333
>gi|358012228|ref|ZP_09144038.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
P8-3-8]
Length = 436
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 221/290 (76%), Gaps = 17/290 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ + +G +P D
Sbjct: 60 LPKPHEIRAALDQYVIGQDTAKKTLSVAVYNHYKRLKVSQ----TGHKPA--------DA 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 168 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ D+
Sbjct: 228 RKHPQQEFIQVDTANILFICGGAFSGLEKVVQQRQEKGGIGFTADVKNK-----DDSKKL 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 283 SELFRQVEAADLVRFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNAL 332
>gi|296536160|ref|ZP_06898288.1| ATP-dependent Clp protease ATP-binding subunit [Roseomonas
cervicalis ATCC 49957]
gi|296263531|gb|EFH10028.1| ATP-dependent Clp protease ATP-binding subunit [Roseomonas
cervicalis ATCC 49957]
Length = 418
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 169/290 (58%), Positives = 219/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQE AKKVLSVAV+NHYKR+ H K G
Sbjct: 61 VPTPREICKVLDDYVIGQEHAKKVLSVAVHNHYKRLAHGG-KTG---------------E 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 VEIAKSNIMLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 164
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 165 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 224
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I+ R + S IG+GA VR D T
Sbjct: 225 RKHPQQEFLQVDTSNILFICGGAFAGLEKIIAGRGKGSGIGYGAEVRG------PDERRT 278
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL+ +GLIPEF+GR P++ +L L E LV++LT+PKNAL
Sbjct: 279 GQILREVEPEDLLKFGLIPEFIGRLPVVATLDDLDEKALVEILTKPKNAL 328
>gi|406902847|gb|EKD45108.1| hypothetical protein ACD_70C00070G0005 [uncultured bacterium]
Length = 421
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 223/291 (76%), Gaps = 24/291 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIY-HANLKKGSGAEPKTAAAVDNDD 319
L +PKE+ LD++VIGQE+AKK+LSVAVYNHYKR+ HA+ +D
Sbjct: 64 LLSPKELHMQLDQYVIGQEEAKKILSVAVYNHYKRLRNHAS-----------------ND 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 DVELSKSNILLIGPTGSGKTLLAQTLARVLNVPFAIADATTLTEAGYVGEDVENIVQKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ ++V+ A+ G++YIDE+DKI++K++S +++RDVSGEGVQQALLK++EGT+ +P +G
Sbjct: 167 QKCNYDVKKAETGIIYIDEIDKISRKSDSPSLTRDVSGEGVQQALLKLIEGTVAAIPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT +ILFICGGAF DL+K + +R +S IGF A ++ ++GV DA +
Sbjct: 227 GRKHPQQEYLQVDTTNILFICGGAFADLDKIVQQRTDESGIGFAATMKK--KSGVPDAGI 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++ VE+ DLI YGLIPEFVGR PI+ L L ED L+ VLTEPKNAL
Sbjct: 285 ----VKKVETQDLIKYGLIPEFVGRLPIISVLDELDEDALLTVLTEPKNAL 331
>gi|414343401|ref|YP_006984922.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconobacter
oxydans H24]
gi|411028736|gb|AFW01991.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconobacter
oxydans H24]
Length = 421
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 162/290 (55%), Positives = 222/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ +AK+ LSVAV+NHYKR+ H V + +
Sbjct: 62 VPTPKEICKVLDDYVIGQFEAKRALSVAVHNHYKRLAH----------------VQKNSD 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 IEIAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ++LFICGGAF L+K IS R + S IGFGA VR+ D
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVRSE------DERRL 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++L++VE DL+ +GLIPEF+GR P++ +L L E L+++L++PKNAL
Sbjct: 280 GAILQTVEPEDLLKFGLIPEFIGRLPVIAALNDLDESALIQILSKPKNAL 329
>gi|299135042|ref|ZP_07028233.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Afipia sp.
1NLS2]
gi|298590019|gb|EFI50223.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Afipia sp.
1NLS2]
Length = 424
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 216/292 (73%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISSRGRTTSIGFAASVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E L K+L EPKNAL
Sbjct: 282 ---EIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNAL 330
>gi|415938746|ref|ZP_11555480.1| ATP-dependent Clp protease, ATP-binding subunit [Herbaspirillum
frisingense GSF30]
gi|407759380|gb|EKF69075.1| ATP-dependent Clp protease, ATP-binding subunit [Herbaspirillum
frisingense GSF30]
Length = 421
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 215/291 (73%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+EI LD++VIGQ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 DLPTPQEITDLLDQYVIGQATAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +I+FICGGAF L K IS+R + S IGF A V++ +
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKIISDRSEKSGIGFSASVKSQTQKS------ 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L + E DL+ +GLIPE VGR P++ +L L E+ L+++L EPKNAL
Sbjct: 282 NSEVLLNAEPEDLVKFGLIPELVGRLPVIATLNELDEEALIQILVEPKNAL 332
>gi|383640601|ref|ZP_09953007.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas
elodea ATCC 31461]
Length = 421
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 218/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P+EIC LD +VIGQ+KAK+VLSVAV+NHYKR+ H KG+ +
Sbjct: 64 VPSPQEICDVLDDYVIGQKKAKRVLSVAVHNHYKRLNHG--AKGA--------------D 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 168 ASDYNVERAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I +R Q SIGFGA V A D T
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFSGLEKIIGDRLQGKSIGFGAHVAA------PDERRT 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL E DL+ +GLIPEFVGR P++ +L L + L+K+LTEPKNAL
Sbjct: 282 GELLRQTEPEDLLKFGLIPEFVGRLPVIATLEDLDVEALIKILTEPKNAL 331
>gi|337755600|ref|YP_004648111.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
sp. TX077308]
gi|336447205|gb|AEI36511.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
sp. TX077308]
Length = 417
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 210/292 (71%), Gaps = 20/292 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LP P EI K LD ++IGQ AKKVLSVAVYNHYKRI K D
Sbjct: 54 EKLPKPIEIKKYLDDYIIGQNNAKKVLSVAVYNHYKRITSETAK---------------D 98
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSNVLL+GPTGSGKTL A+TLA+ +NVPF IADATTLT+AGYVG+DVE+I+ +L
Sbjct: 99 DDIELKKSNVLLLGPTGSGKTLFAQTLAKLLNVPFAIADATTLTEAGYVGDDVENIIVRL 158
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+F++ AQ+G++YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGT+ +VP K
Sbjct: 159 LQNADFDIAKAQKGIIYIDEIDKIARKSESASITRDVSGEGVQQALLKLIEGTVSSVPPK 218
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + IQ+DT DILFICGGAF +EK + R SIGF A V ++
Sbjct: 219 GGRKHPNQEMIQVDTSDILFICGGAFAGIEKVVKHRMDKVSIGFNADVVQQ-----KNSL 273
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T L++ VES DL +GLIPE +GR PI+ L L E+ LVK+L EPKNAL
Sbjct: 274 DTEKLMQKVESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVKILMEPKNAL 325
>gi|209548851|ref|YP_002280768.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|424890862|ref|ZP_18314461.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|424894552|ref|ZP_18318126.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|424914595|ref|ZP_18337959.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|238066658|sp|B5ZY09.1|CLPX_RHILW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|209534607|gb|ACI54542.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|392850771|gb|EJB03292.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|393173080|gb|EJC73125.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393178779|gb|EJC78818.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 425
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 221/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------E 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQ------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 333
>gi|405379886|ref|ZP_11033731.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF142]
gi|397323501|gb|EJJ27894.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF142]
Length = 425
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 222/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G +
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------D 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQ------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 333
>gi|120599413|ref|YP_963987.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella sp.
W3-18-1]
gi|146292591|ref|YP_001183015.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella
putrefaciens CN-32]
gi|166215204|sp|A4Y5I3.1|CLPX_SHEPC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166215206|sp|A1RL88.1|CLPX_SHESW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120559506|gb|ABM25433.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
sp. W3-18-1]
gi|145564281|gb|ABP75216.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
putrefaciens CN-32]
Length = 426
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 220/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +++ PK D
Sbjct: 65 LPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNSS--------PK--------DG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G D A
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKDKAT 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL
Sbjct: 284 ISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNAL 334
>gi|338974251|ref|ZP_08629613.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Bradyrhizobiaceae bacterium SG-6C]
gi|338232978|gb|EGP08106.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Bradyrhizobiaceae bacterium SG-6C]
Length = 424
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 217/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ+ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQQHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISGRGRTTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E L K+L EPKNAL
Sbjct: 282 ---EIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNAL 330
>gi|409406435|ref|ZP_11254897.1| ATP-dependent protease ATP-binding specificity subunit
[Herbaspirillum sp. GW103]
gi|386434984|gb|EIJ47809.1| ATP-dependent protease ATP-binding specificity subunit
[Herbaspirillum sp. GW103]
Length = 421
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 215/291 (73%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+EI LD++VIGQ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 DLPTPQEITDLLDQYVIGQATAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +I+FICGGAF L K IS+R + S IGF A V++ +
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKIISDRSEKSGIGFSASVKSQTQKS------ 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L + E DL+ +GLIPE VGR P++ +L L E+ L+++L EPKNAL
Sbjct: 282 NSEVLLNAEPEDLVKFGLIPELVGRLPVIATLNELDEEALIQILVEPKNAL 332
>gi|408481158|ref|ZP_11187377.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
R81]
Length = 427
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 172/290 (59%), Positives = 219/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I +R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSTRGGIGFSAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNAL 334
>gi|229591361|ref|YP_002873480.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
fluorescens SBW25]
gi|388466303|ref|ZP_10140513.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
synxantha BG33R]
gi|440741132|ref|ZP_20920587.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
fluorescens BRIP34879]
gi|447917343|ref|YP_007397911.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas poae
RE*1-1-14]
gi|259491265|sp|C3JYJ9.1|CLPX_PSEFS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|229363227|emb|CAY50310.1| ATP-dependent specificity component of clpP serine protease,
chaperone [Pseudomonas fluorescens SBW25]
gi|388009883|gb|EIK71070.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
synxantha BG33R]
gi|440373753|gb|ELQ10501.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
fluorescens BRIP34879]
gi|445201206|gb|AGE26415.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas poae
RE*1-1-14]
Length = 427
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 172/290 (59%), Positives = 219/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I +R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSTRGGIGFSAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNAL 334
>gi|427404658|ref|ZP_18895398.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Massilia
timonae CCUG 45783]
gi|425716829|gb|EKU79798.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Massilia
timonae CCUG 45783]
Length = 422
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 215/291 (73%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI + LD++VIGQ+ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 DLPTPHEITELLDQYVIGQQTAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 EVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QSCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +I+FICGGAF L K I R S IGFGA V++ D
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKVIQNRSVKSGIGFGATVKSQ-----NDDYN 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LLE+ E DLI +GLIPE VGR P++ +L+ LTE+ L+++L EPKNAL
Sbjct: 283 AEILLEA-EPEDLIKFGLIPELVGRLPVVAALSELTEEALIQILVEPKNAL 332
>gi|378825566|ref|YP_005188298.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
fredii HH103]
gi|365178618|emb|CCE95473.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sinorhizobium
fredii HH103]
Length = 425
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 164/292 (56%), Positives = 222/292 (76%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI K LD++VIGQ++AK++LSVAV+NHYKR+ HA +
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAHAA----------------KSSD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA VR+ + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRSPEDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 333
>gi|402486167|ref|ZP_10832999.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium sp. CCGE
510]
gi|401814823|gb|EJT07153.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium sp. CCGE
510]
Length = 425
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 221/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------E 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQ------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 333
>gi|387894466|ref|YP_006324763.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
fluorescens A506]
gi|423692341|ref|ZP_17666861.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens SS101]
gi|387159491|gb|AFJ54690.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens A506]
gi|388000622|gb|EIK61951.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens SS101]
Length = 427
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 172/290 (59%), Positives = 219/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I +R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSTRGGIGFSAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNAL 334
>gi|325922709|ref|ZP_08184449.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
gardneri ATCC 19865]
gi|325546826|gb|EGD17940.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
gardneri ATCC 19865]
Length = 428
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ +AK+ L+VAVYNHYKRI + +D
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRS----------------KNDE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R D+ IGFGA V+++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSER-----KQE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+
Sbjct: 285 VGKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAI 335
>gi|190573023|ref|YP_001970868.1| ATP-dependent protease ATP-binding subunit ClpX [Stenotrophomonas
maltophilia K279a]
gi|254524793|ref|ZP_05136848.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Stenotrophomonas sp. SKA14]
gi|344206261|ref|YP_004791402.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Stenotrophomonas maltophilia JV3]
gi|424667285|ref|ZP_18104310.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia Ab55555]
gi|229485949|sp|B2FQR3.1|CLPX_STRMK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|190010945|emb|CAQ44554.1| ATP-dependent clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia K279a]
gi|219722384|gb|EED40909.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Stenotrophomonas sp. SKA14]
gi|343777623|gb|AEM50176.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Stenotrophomonas maltophilia JV3]
gi|401069420|gb|EJP77942.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia Ab55555]
gi|456738230|gb|EMF62907.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia EPM1]
Length = 429
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ +AK+ L+VAVYNHYKRI +D+
Sbjct: 66 LPKPREILEVLDQYVIGQNRAKRTLAVAVYNHYKRIESRQ----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I R D SIGFGA V+++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQARSTDVGSIGFGAKVKSSER-----KQE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+
Sbjct: 285 VGKVLAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAI 335
>gi|227821607|ref|YP_002825577.1| ATP-dependent protease ATP-binding subunit ClpX [Sinorhizobium
fredii NGR234]
gi|254763858|sp|C3MA45.1|CLPX_RHISN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|227340606|gb|ACP24824.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
fredii NGR234]
Length = 425
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 164/292 (56%), Positives = 222/292 (76%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI K LD++VIGQ++AK++LSVAV+NHYKR+ HA +
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAHAA----------------KSSD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA VR+ + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRSPEDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 333
>gi|410582588|ref|ZP_11319694.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermaerobacter subterraneus DSM 13965]
gi|410505408|gb|EKP94917.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermaerobacter subterraneus DSM 13965]
Length = 419
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 217/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP P EI LD++VIGQE+AKK+LSVAVYNHYKRI+ D
Sbjct: 60 DLPKPAEIKAFLDQYVIGQERAKKILSVAVYNHYKRIHLGG----------------RID 103
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+L++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 104 DVELQKSNILMIGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKLI 163
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G+VYIDE+DKI +KAE+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 QAADYDIERAERGIVYIDEIDKIARKAENPSITRDVSGEGVQQALLKILEGTVASVPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF L+K I+ R +GFGA VR+ V D
Sbjct: 224 GRKHPHQEFIQIDTTNILFICGGAFEGLDKIIASRIGRRVMGFGAEVRSKQETNVGD--- 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L + DL+ +GLIPEFVGR P++ +L AL ED LV++LTEPKNAL
Sbjct: 281 ---ILRHIMPEDLLKFGLIPEFVGRLPVIATLDALDEDALVRILTEPKNAL 328
>gi|86357225|ref|YP_469117.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium etli CFN
42]
gi|190891273|ref|YP_001977815.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium etli
CIAT 652]
gi|417110579|ref|ZP_11963749.1| ATP-dependent protease ATP-binding subunit [Rhizobium etli
CNPAF512]
gi|421587069|ref|ZP_16032522.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium sp.
Pop5]
gi|123512322|sp|Q2K9U6.1|CLPX_RHIEC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238692521|sp|B3PVY5.1|CLPX_RHIE6 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|86281327|gb|ABC90390.1| ATP-dependent Clp protease, ATP-binding subunit protein [Rhizobium
etli CFN 42]
gi|190696552|gb|ACE90637.1| ATP-dependent Clp protease protein, ATP-binding subunit [Rhizobium
etli CIAT 652]
gi|327188466|gb|EGE55680.1| ATP-dependent protease ATP-binding subunit [Rhizobium etli
CNPAF512]
gi|403708547|gb|EJZ23213.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium sp.
Pop5]
Length = 425
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 221/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------E 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQ------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 333
>gi|91977363|ref|YP_570022.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris BisB5]
gi|123762673|sp|Q135W8.1|CLPX_RHOPS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91683819|gb|ABE40121.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Rhodopseudomonas palustris BisB5]
Length = 424
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 217/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNAL 330
>gi|422674864|ref|ZP_16734214.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aceris str. M302273]
gi|330972588|gb|EGH72654.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aceris str. M302273]
Length = 427
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 171/290 (58%), Positives = 218/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLAKTLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAKTLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNAL 334
>gi|414166620|ref|ZP_11422852.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia
clevelandensis ATCC 49720]
gi|410892464|gb|EKS40256.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia
clevelandensis ATCC 49720]
Length = 424
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 217/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ+ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQQHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISGRGRTTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E L K+L EPKNAL
Sbjct: 282 ---EIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNAL 330
>gi|384261375|ref|YP_005416561.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhodospirillum
photometricum DSM 122]
gi|378402475|emb|CCG07591.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhodospirillum
photometricum DSM 122]
Length = 446
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 218/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P+EI + LD +VIGQ AKKVL+VAV+NHYKR+ H V + +
Sbjct: 87 VPSPREIMQVLDDYVIGQHHAKKVLAVAVHNHYKRLSH----------------VGRNSD 130
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 131 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 190
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 191 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 250
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + SSIGFGA VR + T
Sbjct: 251 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGKGSSIGFGADVRD------PETRRT 304
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +VE DL+ YGLIPEFVGR P+L +L L ED LV +LT PKNAL
Sbjct: 305 GEILRNVEPEDLLKYGLIPEFVGRLPVLATLDDLDEDALVDILTSPKNAL 354
>gi|410618479|ref|ZP_11329424.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
polaris LMG 21857]
gi|410162021|dbj|GAC33562.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
polaris LMG 21857]
Length = 425
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 169/293 (57%), Positives = 220/293 (75%), Gaps = 22/293 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LPTPKEI LD +VIGQE AKKVLSVAVYNHYKR L+ G D
Sbjct: 63 DELPTPKEIHSHLDDYVIGQEHAKKVLSVAVYNHYKR-----LRNG-----------DVH 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LLMGPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGVELGKSNILLMGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFG ++ + +
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAHTGTGIGFGTAIK-----DINNK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A LL+ VE DL+ YGLIPEF+GR P+L SL L+ED L+++L EPKN+L
Sbjct: 282 AKEGELLKKVEPEDLVKYGLIPEFIGRLPVLTSLEELSEDALIQILREPKNSL 334
>gi|114767021|ref|ZP_01445929.1| ATP-dependent protease ATP-binding subunit [Pelagibaca bermudensis
HTCC2601]
gi|114540805|gb|EAU43869.1| ATP-dependent protease ATP-binding subunit [Roseovarius sp.
HTCC2601]
Length = 421
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 167/301 (55%), Positives = 224/301 (74%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +P+P+EIC LD +VIGQ AK+VLSVAV+NHYKR+ H+ +K S
Sbjct: 52 TKGAGLKSSEGVPSPREICDVLDDYVIGQAMAKRVLSVAVHNHYKRLNHS--QKSS---- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + S++GFGA VR
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAMGFGADVRDP 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
G T + + +E DL+ +GLIPEFVGR P++ +L L ED LV +LT PKNA
Sbjct: 276 EERG------TGEVFKDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILTAPKNA 329
Query: 550 L 550
L
Sbjct: 330 L 330
>gi|194289505|ref|YP_002005412.1| ATP-dependent protease ATP-binding subunit clpx [Cupriavidus
taiwanensis LMG 19424]
gi|238692761|sp|B3R4W2.1|CLPX_CUPTR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|193223340|emb|CAQ69345.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Cupriavidus taiwanensis LMG 19424]
Length = 425
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 214/291 (73%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K D
Sbjct: 66 DLPTPHEIRESLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK----------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I +R + IGF A V++ V
Sbjct: 230 GRKHPNQDFLQVDTTNILFICGGAFDGLEKVIMQRSDKTGIGFAAQVKSKEERDV----- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L E DLI +GLIPE +GR P++ +L L E L+++L EPKNAL
Sbjct: 285 -SEVLPQTEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMQILVEPKNAL 334
>gi|149376711|ref|ZP_01894469.1| ATP-dependent protease ATP-binding subunit [Marinobacter algicola
DG893]
gi|149358950|gb|EDM47416.1| ATP-dependent protease ATP-binding subunit [Marinobacter algicola
DG893]
Length = 427
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 222/290 (76%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+++VIGQ++AK VLSVAVYNHYKR L+ G G
Sbjct: 67 LPTPAEIRDTLNEYVIGQDRAKVVLSVAVYNHYKR-----LRYGEGKA-----------E 110
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 VELGKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 170
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 KCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 230
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ++LFICGGAF L+K I ER + SSIGF A V++ D T
Sbjct: 231 RKHPQQEFLQVDTGNMLFICGGAFAGLDKVIQERSERSSIGFSALVKSP-----DDTKNT 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+++ VE+ DL+ YGLIPEFVGR P++ +LT L E+ LV++LTEPKNAL
Sbjct: 286 GDIIKDVETEDLVKYGLIPEFVGRLPVVATLTELDEEALVQILTEPKNAL 335
>gi|121611286|ref|YP_999093.1| ATP-dependent protease ATP-binding subunit ClpX [Verminephrobacter
eiseniae EF01-2]
gi|121555926|gb|ABM60075.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Verminephrobacter eiseniae EF01-2]
Length = 447
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 216/290 (74%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AK+ L+VAVYNHYKR+ + A ND
Sbjct: 91 LPTPAEIKNNLDNYVIGQEEAKRTLAVAVYNHYKRLRYKE------------KARKND-- 136
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 137 VELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLLQ 196
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+V+VP +G
Sbjct: 197 SCGYKVEPAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMVSVPPQGG 256
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D +Q+DT DILFICGGAF LEK I R + S IGFGA V++ + +TD
Sbjct: 257 RKHPNQDFLQIDTSDILFICGGAFAGLEKVIENRTEASGIGFGASVKSKKQRSLTD---- 312
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DLI +GLIPE VGR P++ +L L+E L+++LTEP+NAL
Sbjct: 313 --VFAEVEPEDLIKFGLIPELVGRMPVVTALAELSEQALIQILTEPRNAL 360
>gi|386717298|ref|YP_006183624.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia D457]
gi|384076860|emb|CCH11445.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia D457]
Length = 429
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ +AK+ L+VAVYNHYKRI +D+
Sbjct: 66 LPKPREILEVLDQYVIGQNRAKRTLAVAVYNHYKRIESRQ----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I R D SIGFGA V+++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQARSTDVGSIGFGAKVKSSER-----KQE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+
Sbjct: 285 VGKVLAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAI 335
>gi|410943167|ref|ZP_11374908.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconobacter
frateurii NBRC 101659]
Length = 421
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 162/290 (55%), Positives = 222/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ +AK+ LSVAV+NHYKR+ HA + +
Sbjct: 62 VPTPKEICKVLDDYVIGQFEAKRALSVAVHNHYKRLAHAQ----------------KNSD 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 IEIAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ++LFICGGAF L+K IS R + S IGFGA VR+ D
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVRSE------DERRL 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++L++VE DL+ +GLIPEF+GR P++ +L L E L+++L++PKNAL
Sbjct: 280 GAILQTVEPEDLLKFGLIPEFIGRLPVIAALNDLDEAALIQILSKPKNAL 329
>gi|418055592|ref|ZP_12693646.1| ATP-dependent Clp protease ATP-binding subunit clpX [Hyphomicrobium
denitrificans 1NES1]
gi|353209870|gb|EHB75272.1| ATP-dependent Clp protease ATP-binding subunit clpX [Hyphomicrobium
denitrificans 1NES1]
Length = 415
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 218/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ AK+VLSVAV+NHYKR+ HA +++
Sbjct: 58 VPTPQEICNVLDSYVIGQFHAKRVLSVAVHNHYKRLNHAT----------------KNND 101
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 102 VELAKSNILLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 161
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 162 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 221
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + SSIGF A V D T
Sbjct: 222 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISRRGKGSSIGFSAKVTG------PDERRT 275
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL+ +GLIPEF+GR P++ +L L E LV++LTEPKNA+
Sbjct: 276 GDILRGVEPEDLLKFGLIPEFIGRLPVIATLEDLDEAALVQILTEPKNAI 325
>gi|296284616|ref|ZP_06862614.1| ATP-dependent protease ATP-binding subunit ClpX [Citromicrobium
bathyomarinum JL354]
Length = 421
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 171/291 (58%), Positives = 215/291 (73%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++PTP EIC L+ +VIGQE+AK+VLSVAV+NHYKR+ HA K+G
Sbjct: 60 EVPTPSEICATLNDYVIGQERAKRVLSVAVHNHYKRLKHAG-KQG--------------- 103
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 104 DVELAKSNILLVGPTGSGKTLLAQTLARTFDVPFTMADATTLTEAGYVGEDVENIILKLL 163
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+++NVE AQ G+VYIDE+DKIT+KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 164 QASDYNVEKAQHGIVYIDEIDKITRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT +ILFICGGAF L+K I +R Q SIGFGA V D
Sbjct: 224 GRKHPQQEFLQVDTTNILFICGGAFAGLDKIIGDRLQKRSIGFGAHV------ADPDKRR 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LLE E DL+ +GLIPEFVGR P++ SL L D LV +L EPKNA+
Sbjct: 278 IGELLEKSEPEDLLKFGLIPEFVGRLPVIASLHDLDVDALVTILQEPKNAI 328
>gi|83311890|ref|YP_422154.1| ATP-dependent protease ATP-binding subunit ClpX [Magnetospirillum
magneticum AMB-1]
gi|123541533|sp|Q2W3I0.1|CLPX_MAGSA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|82946731|dbj|BAE51595.1| ATP-dependent protease Clp [Magnetospirillum magneticum AMB-1]
Length = 421
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 216/290 (74%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPK+IC+ LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 VPTPKDICQVLDDYVIGQSHAKKVLSVAVHNHYKRLQHGG----------------KNNE 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
AE+NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AAEYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I R + +SIGFGA VR D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIGSRGRGTSIGFGADVRG------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL+ +GLIPEFVGR P+L +L L D L+ +L++PKNAL
Sbjct: 281 GEILREVEPEDLLKFGLIPEFVGRLPVLATLEDLDVDALIDILSKPKNAL 330
>gi|374575869|ref|ZP_09648965.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. WSM471]
gi|386402535|ref|ZP_10087313.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. WSM1253]
gi|374424190|gb|EHR03723.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. WSM471]
gi|385743161|gb|EIG63357.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. WSM1253]
Length = 423
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 216/292 (73%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E L K+L EPKNAL
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNAL 330
>gi|254294161|ref|YP_003060184.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Hirschia
baltica ATCC 49814]
gi|254042692|gb|ACT59487.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Hirschia
baltica ATCC 49814]
Length = 423
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 165/294 (56%), Positives = 222/294 (75%), Gaps = 25/294 (8%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EIC LD +VIGQ +AK+VL+VAV+NHYKR+ HA+ N
Sbjct: 62 EGVPTPQEICDVLDDYVIGQAQAKRVLAVAVHNHYKRLSHAS---------------KNG 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 NEVELAKSNILLVGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L +++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR--ANMRAGVTD 496
G RKHP+ + +Q+DT ++LFICGGAF L+K IS+R Q SSIGFGA V + R G
Sbjct: 227 GGRKHPQQEFLQVDTTNMLFICGGAFAGLDKVISDRGQGSSIGFGATVSDPDDRRVG--- 283
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++L+ E DL+ +GLIPEF+GR P++ +L L D LV +LT+PKNAL
Sbjct: 284 -----AVLQDCEPEDLVKFGLIPEFIGRLPVIATLEDLDTDSLVMILTQPKNAL 332
>gi|53805231|ref|YP_113049.1| ATP-dependent protease ATP-binding subunit ClpX [Methylococcus
capsulatus str. Bath]
gi|61211759|sp|Q60BE7.1|CLPX2_METCA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX 2
gi|53758992|gb|AAU93283.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylococcus
capsulatus str. Bath]
Length = 428
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 218/293 (74%), Gaps = 18/293 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
+ LP PKEI K LD++VIGQEKAK++LSVAVYNHYKR+ +
Sbjct: 62 ADKLPKPKEIKKVLDEYVIGQEKAKRILSVAVYNHYKRL-------------RAQQTHSK 108
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 109 KNEVELAKSNILLIGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQK 168
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
+L + +++VE A+QG+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 169 ILQKCDYDVEKAEQGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTVASVPP 228
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP+ + +Q++T +ILFICGGAF LEK I R + IGF A V++ D+
Sbjct: 229 QGGRKHPQQEFLQVNTANILFICGGAFAGLEKIIRSRSEQGGIGFAADVKSK-----DDS 283
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE+ DLI YGLIPEFVGR P++ +L L E LV++LTEPKNAL
Sbjct: 284 RNVGEVLADVEAEDLIRYGLIPEFVGRLPVVATLEELDEAALVRILTEPKNAL 336
>gi|300023468|ref|YP_003756079.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Hyphomicrobium
denitrificans ATCC 51888]
gi|299525289|gb|ADJ23758.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Hyphomicrobium denitrificans ATCC 51888]
Length = 415
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 218/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ AK+VLSVAV+NHYKR+ HA +++
Sbjct: 58 VPTPQEICNVLDSYVIGQFHAKRVLSVAVHNHYKRLNHAT----------------KNND 101
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 102 VELAKSNILLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 161
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 162 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 221
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + SSIGF A R D T
Sbjct: 222 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISRRGKGSSIGFSA------RVTGPDERRT 275
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL+ +GLIPEF+GR P++ +L L E LV++LTEPKNA+
Sbjct: 276 GDILRGVEPEDLLKFGLIPEFIGRLPVIATLEDLDEAALVQILTEPKNAI 325
>gi|411001021|gb|AFV98752.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Candidatus
Snodgrassella sp. T3_2_35043]
gi|411001073|gb|AFV98801.1| ClpX [Candidatus Snodgrassella sp. TA7_36335]
Length = 420
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 215/292 (73%), Gaps = 21/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP EI LD++VIGQE AKK L+VAVYNHYKR+ L K G
Sbjct: 62 EKLPTPAEIVANLDQYVIGQETAKKSLAVAVYNHYKRL---RLGKEEG------------ 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE I+ KL
Sbjct: 107 -QVELSKSNILLIGPTGSGKTLLAQTLARKLDVPFVMADATTLTEAGYVGEDVEQIITKL 165
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +F+V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 166 LGKCDFDVQKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 225
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + +
Sbjct: 226 GGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSK-----DENT 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L ++VE DLI +GLIPE +GR P++ +LT L ED L+ +LTEPKNAL
Sbjct: 281 NVSELFQTVEPEDLIKFGLIPELIGRLPVIATLTELDEDALINILTEPKNAL 332
>gi|90021256|ref|YP_527083.1| ATP-dependent protease ATP-binding subunit ClpX [Saccharophagus
degradans 2-40]
gi|123277147|sp|Q21KA8.1|CLPX_SACD2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|89950856|gb|ABD80871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Saccharophagus degradans 2-40]
Length = 431
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 165/293 (56%), Positives = 220/293 (75%), Gaps = 18/293 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ LPTP+EI + LD++VIGQ++AKKVL+VAVYNHYKR+ + KK
Sbjct: 63 GDKLPTPQEISETLDEYVIGQKQAKKVLAVAVYNHYKRLRVGDKKKSK------------ 110
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 111 -DDVELGKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 169
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 170 LLQKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 229
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP+ + +Q+DT +ILFICGGAF L+K I +R + IGF A V++
Sbjct: 230 QGGRKHPQQEFLQVDTGNILFICGGAFAGLDKVIRDRSEKGGIGFSAEVKSK-----DSG 284
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L +E DL+ YGLIPEFVGR P++ +L L +D LV++L EPKN+L
Sbjct: 285 KNVGETLRELEPEDLVRYGLIPEFVGRLPVIATLDELDQDALVRILKEPKNSL 337
>gi|313891580|ref|ZP_07825190.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dialister
microaerophilus UPII 345-E]
gi|313120039|gb|EFR43221.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dialister
microaerophilus UPII 345-E]
Length = 411
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 163/290 (56%), Positives = 223/290 (76%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI K +D++VI QE+AK L+VAVYNHYKRI + +K G +D+
Sbjct: 61 LPTPVEIKKYMDQYVIDQEEAKIALAVAVYNHYKRIKY---EKDGG-----------NDD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN++++GPTGSGKTLLA+TLAR ++VPF I+DATTLT+AGYVGEDVE+IL +L+
Sbjct: 107 VELQKSNIIMLGPTGSGKTLLAQTLARFLDVPFAISDATTLTEAGYVGEDVENILLRLIQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 167 AADYDLEKAERGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVANVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT ILFICGGAF ++K +++R S++GFGA ++ V
Sbjct: 227 RKHPNQEMIQLDTSKILFICGGAFAGMDKVVAKRLTKSAVGFGADIKKKEEKDV------ 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +L VE DL+ +GLIPEF+GR PILV+L+ L+ED LV++LT+PKNAL
Sbjct: 281 AKILNMVEPEDLLKFGLIPEFIGRLPILVALSPLSEDALVRILTQPKNAL 330
>gi|388456733|ref|ZP_10139028.1| ATP-dependent protease ATP-binding subunit ClpX [Fluoribacter
dumoffii Tex-KL]
Length = 424
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 215/290 (74%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 63 LPSPKEISTFLDEYVIGQSHAKKVLSVAVYNHYKRLQHKS-----------------EDG 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 166 KCDYDVDKAQHGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I ER S IGF A ++ ++
Sbjct: 226 RKHPQQEFLQVDTSNILFICGGAFAGLEKVIRERSDKSGIGFSAQLKNKKE----NSDEI 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L +ES DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL
Sbjct: 282 SKVLNQLESDDLIKYGLIPEFVGRLPVVATLQELDESALIDILTNPKNAL 331
>gi|410087015|ref|ZP_11283720.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Morganella
morganii SC01]
gi|421492900|ref|ZP_15940259.1| CLPX [Morganella morganii subsp. morganii KT]
gi|455740392|ref|YP_007506658.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Morganella
morganii subsp. morganii KT]
gi|400193005|gb|EJO26142.1| CLPX [Morganella morganii subsp. morganii KT]
gi|409766244|gb|EKN50338.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Morganella
morganii SC01]
gi|455421955|gb|AGG32285.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Morganella
morganii subsp. morganii KT]
Length = 426
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 171/292 (58%), Positives = 221/292 (75%), Gaps = 21/292 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI + LD +VIGQE AKKVL+VAVYNHYKR+ + + KTA D
Sbjct: 65 ELPTPHEIRQHLDDYVIGQELAKKVLAVAVYNHYKRLRNGD---------KTA------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 GVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 170 QKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTIAAVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAA 498
RKHP+ + +Q+DT ILFICGGAF L+K + +R S IGFGA VR G D A
Sbjct: 230 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVVGQRLNTRSGIGFGAEVR-----GEKDKA 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+ED L+++L EPKNAL
Sbjct: 285 TEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLGELSEDALIQILQEPKNAL 336
>gi|197105277|ref|YP_002130654.1| ATP-dependent protease ATP-binding subunit ClpX [Phenylobacterium
zucineum HLK1]
gi|238690156|sp|B4RCN8.1|CLPX_PHEZH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|196478697|gb|ACG78225.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Phenylobacterium zucineum HLK1]
Length = 420
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 218/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA +++
Sbjct: 63 VPTPKEIREVLDDYVIGQDHAKKVLSVAVHNHYKRLNHAT----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL K+N+LL+GPTG+GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELGKANILLIGPTGTGKTLLAQTLARIIDVPFTVADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R Q +SIGFGA V D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGQGTSIGFGAKV------ADPDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ +GLIPEF+GR P++ +L L E LVK+LTEPKNA
Sbjct: 281 GEIFRQVEPDDLLRFGLIPEFIGRLPVIATLDDLDEKALVKILTEPKNAF 330
>gi|254455799|ref|ZP_05069228.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Candidatus
Pelagibacter sp. HTCC7211]
gi|207082801|gb|EDZ60227.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Candidatus
Pelagibacter sp. HTCC7211]
Length = 422
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 221/290 (76%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEIC LD +VIGQ AKKVLSVAV+NHYKR+ + N KT+ N
Sbjct: 59 LPSPKEICSVLDDYVIGQPHAKKVLSVAVHNHYKRLNYEN---------KTSK------N 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 104 VELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDEVDKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 164 ASDYNVEKAQRGIVYIDEVDKISRKSENPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGFGA V+ T T
Sbjct: 224 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISQRDKGTSIGFGADVKN------TQDKKT 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++++E DL+ +GLIPEF+GR P++ +L L E L+K+L EPKN+L
Sbjct: 278 GEWMKTLEPEDLLKFGLIPEFIGRLPMIATLEDLDEKSLIKILQEPKNSL 327
>gi|315499704|ref|YP_004088507.1| ATP-dependent clp protease, ATP-binding subunit clpx [Asticcacaulis
excentricus CB 48]
gi|315417716|gb|ADU14356.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Asticcacaulis
excentricus CB 48]
Length = 419
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 173/292 (59%), Positives = 222/292 (76%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ +AKKVLSVAV+NHYKR+ HA KG ++
Sbjct: 63 VPTPKEIREVLDDYVIGQAQAKKVLSVAVHNHYKRLNHA--AKG--------------ND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR--ANMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGFGA V+ R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISGRGKGTSIGFGATVKDPEERRLG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL+ +GLIPEF+GR P+L +L L E LVK+LTEPKNAL
Sbjct: 282 ---EVLHQVEPDDLMKFGLIPEFIGRLPVLATLEDLDEATLVKILTEPKNAL 330
>gi|268592035|ref|ZP_06126256.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Providencia
rettgeri DSM 1131]
gi|291312427|gb|EFE52880.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Providencia
rettgeri DSM 1131]
Length = 425
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 169/292 (57%), Positives = 222/292 (76%), Gaps = 21/292 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI + LD +VIGQEKAKKVL+VAVYNHYKR+ + + KT+ D
Sbjct: 63 ELPTPHEIRQHLDDYVIGQEKAKKVLAVAVYNHYKRLRNGD---------KTS------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 GVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 168 QKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAA 498
RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGF A V+ G +D A
Sbjct: 228 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTRSGIGFAAEVK-----GESDKA 282
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL E DLI +GLIPEF+GR P++ +LT L+E+ L+++L EPKNAL
Sbjct: 283 TEGELLTQAEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILQEPKNAL 334
>gi|92117751|ref|YP_577480.1| ATP-dependent protease ATP-binding subunit ClpX [Nitrobacter
hamburgensis X14]
gi|122417675|sp|Q1QL77.1|CLPX_NITHX RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91800645|gb|ABE63020.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Nitrobacter
hamburgensis X14]
Length = 424
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 217/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRTTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNAL 330
>gi|75676089|ref|YP_318510.1| ATP-dependent protease ATP-binding subunit ClpX [Nitrobacter
winogradskyi Nb-255]
gi|123773227|sp|Q3SRD3.1|CLPX_NITWN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|74420959|gb|ABA05158.1| ClpX, ATPase regulatory subunit [Nitrobacter winogradskyi Nb-255]
Length = 424
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 217/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRTTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNAL 330
>gi|393769362|ref|ZP_10357886.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
sp. GXF4]
gi|392725261|gb|EIZ82602.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
sp. GXF4]
Length = 423
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 220/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA ++
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS+R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISQRGKGTSIGFGASVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ SVE DL+ +GLIPEFVGR P+L +L L E L K+L EPKNAL
Sbjct: 281 GEIFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEAALKKILQEPKNAL 330
>gi|386815715|ref|ZP_10102933.1| ATP-dependent Clp protease ATP-binding subunit clpX [Thiothrix
nivea DSM 5205]
gi|386420291|gb|EIJ34126.1| ATP-dependent Clp protease ATP-binding subunit clpX [Thiothrix
nivea DSM 5205]
Length = 426
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 168/297 (56%), Positives = 223/297 (75%), Gaps = 21/297 (7%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
GS+ LPTP E+ LD++VIGQE AK+VLSVAVYNHYKR+Y KKG
Sbjct: 59 GSDEQSSLPTPHELKANLDEYVIGQELAKRVLSVAVYNHYKRLY----KKG--------- 105
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+
Sbjct: 106 ---GKDDVELAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVEN 162
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
I+ KLL + +++VE AQ G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGTI
Sbjct: 163 IIQKLLQKCDYDVEKAQTGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTIA 222
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 493
+VP +G RKHP+ + +Q+DT++ILFI GGAF +++ I R + SIGF A V+A
Sbjct: 223 SVPPQGGRKHPQQEFLQVDTRNILFIVGGAFAGMDRVIRRRTEKGSIGFSAKVKAP---- 278
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++ ++ +E+ DL+ YGLIPEFVGR P++ +L L E+ LV++LTEP+NAL
Sbjct: 279 -DESRSFGEVIRDIEAEDLVHYGLIPEFVGRLPVVATLEELDEEALVQILTEPRNAL 334
>gi|170751515|ref|YP_001757775.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
radiotolerans JCM 2831]
gi|238688765|sp|B1LW29.1|CLPX_METRJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|170658037|gb|ACB27092.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium radiotolerans JCM 2831]
Length = 423
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 220/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA ++
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS+R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISQRGKGTSIGFGATVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ SVE DL+ +GLIPEFVGR P+L +L L E L K+L EPKNAL
Sbjct: 281 GEIFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEAALKKILQEPKNAL 330
>gi|312961788|ref|ZP_07776286.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens WH6]
gi|311284047|gb|EFQ62630.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens WH6]
Length = 438
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 172/290 (59%), Positives = 219/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 76 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 120
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 121 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 180
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 181 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 240
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I +R IGF A VR+ V
Sbjct: 241 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSTRGGIGFSAEVRSKEEG----KKVG 296
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 297 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNAL 345
>gi|399038247|ref|ZP_10734548.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF122]
gi|398063910|gb|EJL55617.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF122]
Length = 425
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 164/292 (56%), Positives = 221/292 (75%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA +
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAT----------------KNSE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAPDDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 333
>gi|333908457|ref|YP_004482043.1| ATP-dependent Clp protease ATP-binding subunit clpX [Marinomonas
posidonica IVIA-Po-181]
gi|333478463|gb|AEF55124.1| ATP-dependent Clp protease ATP-binding subunit clpX [Marinomonas
posidonica IVIA-Po-181]
Length = 426
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 164/302 (54%), Positives = 226/302 (74%), Gaps = 21/302 (6%)
Query: 250 SRWGGSNLGED-LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAE 308
S+ G ++ ED LPTP ++ LD +VIGQ++AK+VL+VAVYNHYKR+ H
Sbjct: 56 SQVDGESISEDELPTPMKLSTALDDYVIGQDRAKRVLAVAVYNHYKRLRHQG-------- 107
Query: 309 PKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVG 368
+D +EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVG
Sbjct: 108 -------KSDSGIELGKSNILLIGPTGSGKTLLAQTLARVLDVPFTIADATTLTEAGYVG 160
Query: 369 EDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 428
EDVE+I+ KLL +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++
Sbjct: 161 EDVENIIQKLLQNCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLI 220
Query: 429 EGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA 488
EGT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF LE+ I ER + SSIGF A V++
Sbjct: 221 EGTVASVPPQGGRKHPQQEFLQVDTSNILFICGGAFAGLERVIGERTEKSSIGFSAKVKS 280
Query: 489 NMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKN 548
+ S + +VE+ DL+ +GLIPEFVGR P++ +L+ L ++ LV +L+EPKN
Sbjct: 281 K-----DEGKSFSETVHNVETEDLVKFGLIPEFVGRLPVVATLSELDQEALVTILSEPKN 335
Query: 549 AL 550
AL
Sbjct: 336 AL 337
>gi|261855008|ref|YP_003262291.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Halothiobacillus neapolitanus c2]
gi|261835477|gb|ACX95244.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Halothiobacillus neapolitanus c2]
Length = 434
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 169/292 (57%), Positives = 219/292 (75%), Gaps = 13/292 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKE+ + LD++VIGQ++AK+ L+VAVYNHYKR+ NL G+ K A + D+
Sbjct: 61 LPTPKELVEALDEYVIGQQRAKRALAVAVYNHYKRL---NL---FGSTRKVAEKDKDSDS 114
Query: 321 --VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+IL KL
Sbjct: 115 EPVELSKSNILLIGPTGSGKTLLAQTLARVLDVPFAIADATTLTEAGYVGEDVENILQKL 174
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ G+VYIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGT +VP +
Sbjct: 175 LQRCDYDVEKAQHGIVYIDEIDKITRKSENPSITRDVSGEGVQQALLKLIEGTQASVPPQ 234
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+ I +R + IGF A V++ D
Sbjct: 235 GGRKHPQQEFVQLDTTNILFICGGAFSGLDSIIRQRIEKGGIGFSAEVKSK-----DDKR 289
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL +ES DL YGLIPEF+GR P++ +L L E LVK+L EPKNAL
Sbjct: 290 AADELLTQIESEDLTRYGLIPEFIGRLPVIATLNELDEAALVKILVEPKNAL 341
>gi|430003193|emb|CCF18978.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhizobium sp.]
Length = 425
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 222/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ++AK++LSVAV+NHYKR+ HA+ G E
Sbjct: 66 VPTPQDIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAHAS----KGGE------------ 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAE------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 333
>gi|84686589|ref|ZP_01014482.1| ATP-dependent protease ATP-binding subunit [Maritimibacter
alkaliphilus HTCC2654]
gi|84665502|gb|EAQ11979.1| ATP-dependent protease ATP-binding subunit [Rhodobacterales
bacterium HTCC2654]
Length = 423
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 219/290 (75%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ AK+VLSVAV+NHYKR+ HA K G D
Sbjct: 64 VPTPQEICGVLDDYVIGQSHAKRVLSVAVHNHYKRLNHAA-KHG--------------DE 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 ASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L++ I++R + S+IGFGA V+ A
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAIGFGADVKDEQ------ARKI 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + +E DL+ +GLIPEFVGR P++ +L L ED LV +LT+PKNAL
Sbjct: 283 GEVFQELEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILTQPKNAL 332
>gi|83592886|ref|YP_426638.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodospirillum
rubrum ATCC 11170]
gi|386349616|ref|YP_006047864.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodospirillum
rubrum F11]
gi|123739541|sp|Q2RU44.1|CLPX_RHORT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|83575800|gb|ABC22351.1| ClpX, ATPase regulatory subunit [Rhodospirillum rubrum ATCC 11170]
gi|346718052|gb|AEO48067.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodospirillum
rubrum F11]
Length = 422
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 219/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+PK+I K LD +VIGQ+ AKKVLSVAV+NHYKR+ A + +
Sbjct: 63 VPSPKDILKVLDDYVIGQQHAKKVLSVAVHNHYKRLSQAG----------------KNSD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L++ IS R + SSIGFGA VR +A T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGKGSSIGFGADVRD------PEARRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +VE DL+ YGLIPEFVGR P+L +L L ED LV +LT PKNAL
Sbjct: 281 GEVLRAVEPEDLLKYGLIPEFVGRLPVLATLDDLDEDALVDILTTPKNAL 330
>gi|381197076|ref|ZP_09904417.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
lwoffii WJ10621]
Length = 436
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 219/290 (75%), Gaps = 17/290 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G +DD
Sbjct: 60 LPKPHEIRAALDQYVIGQDVAKKTLSVAVYNHYKR-----LKATHGGHK-------HDDA 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+T+AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VEIAKSNILLVGPTGSGKTLLAQTMARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 168 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ +
Sbjct: 228 RKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTAEVKKK-----DEGKKL 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 283 SDLFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNAL 332
>gi|316933822|ref|YP_004108804.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Rhodopseudomonas palustris DX-1]
gi|315601536|gb|ADU44071.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodopseudomonas palustris DX-1]
Length = 424
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 217/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISGRGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDETSLKKILTDPKNAL 330
>gi|307729639|ref|YP_003906863.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Burkholderia
sp. CCGE1003]
gi|323526046|ref|YP_004228199.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
sp. CCGE1001]
gi|407713409|ref|YP_006833974.1| ATP-dependent Clp protease ATP-binding protein subunit ClpX
[Burkholderia phenoliruptrix BR3459a]
gi|307584174|gb|ADN57572.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
sp. CCGE1003]
gi|323383048|gb|ADX55139.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
sp. CCGE1001]
gi|407235593|gb|AFT85792.1| ATP-dependent Clp protease ATP-binding protein subunit ClpX
[Burkholderia phenoliruptrix BR3459a]
Length = 423
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 221/306 (72%), Gaps = 24/306 (7%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G G S DLP P+EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H
Sbjct: 52 AAGAGIEAGLSK--SDLPGPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKH------ 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+D D +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+A
Sbjct: 104 ----------LDKKDEIELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEA 153
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQAL
Sbjct: 154 GYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 213
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF LEK I +R + + IGFGA
Sbjct: 214 LKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVIVDRTEKTGIGFGA 273
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V++ DA +L VE DLI +GLIPE +GR P++ +L L E L+K+L
Sbjct: 274 SVKSKQD---RDAG---EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILV 327
Query: 545 EPKNAL 550
EPKNAL
Sbjct: 328 EPKNAL 333
>gi|225573067|ref|ZP_03781822.1| hypothetical protein RUMHYD_01258 [Blautia hydrogenotrophica DSM
10507]
gi|225039573|gb|EEG49819.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Blautia
hydrogenotrophica DSM 10507]
Length = 432
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 218/291 (74%), Gaps = 23/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+L TP+EI LD++VIGQ++AKK LSVAVYNHYKR+ PK+
Sbjct: 63 NLMTPQEIHNFLDEYVIGQDEAKKALSVAVYNHYKRVMA----------PKSL------- 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+L++GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL K++
Sbjct: 106 DVELQKSNILMLGPTGSGKTLLAQTLAKLLNVPFAIADATTLTEAGYVGEDVENILLKII 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E AQ G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 166 QAADYDIERAQYGIIYIDEIDKITRKSENASITRDVSGEGVQQALLKILEGTVASVPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF LEK I+ R+ SIGFGA VR+ V
Sbjct: 226 GRKHPHQEFIQIDTTNILFICGGAFEGLEKIIATRKDQKSIGFGADVRSAKEHNV----- 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL V D I +GLIPEF+GR P++VSL AL E+ L+++L EPKN+L
Sbjct: 281 -GELLREVMPEDFIKFGLIPEFIGRVPVVVSLNALDEEALIRILQEPKNSL 330
>gi|213521160|gb|ACJ50517.1| ATP-dependent protease ATP-binding subunit [Pseudomonas fluorescens
SS101]
Length = 438
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 172/290 (59%), Positives = 219/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 76 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 120
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 121 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 180
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 181 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 240
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I +R IGF A VR+ V
Sbjct: 241 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSTRGGIGFSAEVRSKEEG----KKVG 296
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 297 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNAL 345
>gi|398948872|ref|ZP_10672974.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM33]
gi|398160046|gb|EJM48328.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM33]
Length = 427
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 218/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDETALMQILTEPKNAL 334
>gi|319787635|ref|YP_004147110.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoxanthomonas suwonensis 11-1]
gi|317466147|gb|ADV27879.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Pseudoxanthomonas suwonensis 11-1]
Length = 429
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 220/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ++AKK L+VAVYNHYKRI +++
Sbjct: 66 LPKPREILEVLDQYVIGQQRAKKTLAVAVYNHYKRIESRQ----------------RNED 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFI GGAF L+K I +R D+ IGFGA V+++ A
Sbjct: 230 RKHPQQEFLQVDTKNILFIVGGAFAGLDKIIQQRSSDAGGIGFGAKVKSSKV-----KAD 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T LL VE DLI +GLIPEFVGR P++ +L L E LVK+LTEPKNA+
Sbjct: 285 TGKLLAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALVKILTEPKNAI 335
>gi|84515417|ref|ZP_01002779.1| ATP-dependent protease ATP-binding subunit [Loktanella
vestfoldensis SKA53]
gi|84510700|gb|EAQ07155.1| ATP-dependent protease ATP-binding subunit [Loktanella
vestfoldensis SKA53]
Length = 421
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 164/301 (54%), Positives = 222/301 (73%), Gaps = 23/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G GE +PTP +IC LD +VIGQ AK+VLSVAV+NHYKR+ HA+
Sbjct: 52 TKASGLKSGEGVPTPSDICAVLDDYVIGQVHAKRVLSVAVHNHYKRLNHAD--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN++L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 --------KSDIELAKSNIMLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I+ R + S +GFGA V+
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIARRSKGSGMGFGADVKDV 274
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
G+ + + +E DL+ +GLIPEFVGR P++ +LT L ED L+ +LT+PKNA
Sbjct: 275 DERGI------GEVFQDLEPEDLLKFGLIPEFVGRLPVIATLTDLDEDALITILTKPKNA 328
Query: 550 L 550
L
Sbjct: 329 L 329
>gi|320102131|ref|YP_004177722.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Isosphaera
pallida ATCC 43644]
gi|319749413|gb|ADV61173.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Isosphaera
pallida ATCC 43644]
Length = 478
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 175/304 (57%), Positives = 222/304 (73%), Gaps = 25/304 (8%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
SR G S GE +P P+EI LD++VIGQ++AKKVLSVAV+NHYKR+ H EP
Sbjct: 76 SRGGRSLFGE-IPNPREIKAQLDQYVIGQDRAKKVLSVAVHNHYKRLVHDE-------EP 127
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+T +VEL+KSN+LL+GPTGSGKTLLA+TLAR +NVPF I DATTLT+AGYVGE
Sbjct: 128 ET--------DVELDKSNILLIGPTGSGKTLLARTLARVLNVPFAIGDATTLTEAGYVGE 179
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+IL KLL A F++EAAQ+G+VYIDE+DKI K + +++I+RDVSGEGVQQALLKMLE
Sbjct: 180 DVENILLKLLHAANFDLEAAQRGIVYIDEIDKIGKTSHNVSITRDVSGEGVQQALLKMLE 239
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ NVP +G RKHP IQMDT +ILFICGG FV L+ I+ R +IGFG +
Sbjct: 240 GTVANVPPQGGRKHPEQQYIQMDTTNILFICGGTFVGLDNIIARRIGRKTIGFGGAM--- 296
Query: 490 MRAGVTDAAVT---SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEP 546
G +D+A + LL V S D++ +GLIPEF+GR P++ L L + LV++LTEP
Sbjct: 297 ---GDSDSAREKNLADLLNQVTSDDVLEFGLIPEFIGRLPVICPLMPLDVEALVQILTEP 353
Query: 547 KNAL 550
+NAL
Sbjct: 354 RNAL 357
>gi|30248063|ref|NP_840133.1| ATP-dependent protease ATP-binding subunit ClpX [Nitrosomonas
europaea ATCC 19718]
gi|46576514|sp|Q82Y56.1|CLPX_NITEU RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|30179948|emb|CAD83943.1| clpX; ATP-dependent protease (ATP-binding specificity subunit)
[Nitrosomonas europaea ATCC 19718]
Length = 426
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 169/290 (58%), Positives = 217/290 (74%), Gaps = 18/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + LD++VIGQE AKK+LSVAVYNHYKR+ K + V+N D+
Sbjct: 63 LPTPHEIRETLDQYVIGQESAKKILSVAVYNHYKRL-------------KNLSKVNNGDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELSKSNILLIGPTGSGKTLLAQTLARLLDVPFVIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT VP +G
Sbjct: 170 KCNHDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTALVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF ++K I R + S IGFGA V D
Sbjct: 230 RKHPNQEFIQIDTTNILFICGGAFDGIDKIIRGRSEKSGIGFGADV-----INQNDRKEL 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +L+ +E DLI YGLIPEFVGR P++ +L+ L E L+++L EPKNAL
Sbjct: 285 NKILKDIEPEDLIKYGLIPEFVGRLPVVATLSELNEAALIQILVEPKNAL 334
>gi|410633402|ref|ZP_11344048.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
arctica BSs20135]
gi|410147117|dbj|GAC20915.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
arctica BSs20135]
Length = 425
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 221/293 (75%), Gaps = 22/293 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+DLPTPKEI LD +VIGQE AKKVLSVAVYNHYKR+ + ++ +G
Sbjct: 63 DDLPTPKEIHAHLDDYVIGQEHAKKVLSVAVYNHYKRLRNGDVHEG-------------- 108
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VEL KSN+LLMGPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 109 --VELGKSNILLMGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFG+ ++ +++
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAHTGTGIGFGSEIK-----NISNK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A L+ VE DL+ YGLIPEF+GR P+L L L+ED LV++L EPKN+L
Sbjct: 282 AQEGEWLKKVEPEDLVKYGLIPEFIGRLPVLTCLEELSEDALVQILREPKNSL 334
>gi|365873787|ref|ZP_09413320.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermanaerovibrio velox DSM 12556]
gi|363983874|gb|EHM10081.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermanaerovibrio velox DSM 12556]
Length = 429
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 174/306 (56%), Positives = 222/306 (72%), Gaps = 22/306 (7%)
Query: 246 GGGGSRWGGSNLGED-LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G R G LG D +P P EI LD++VIGQ++AKKVLSVAVYNHY+RI A
Sbjct: 57 GAPSLRDGKEPLGLDKIPRPDEIKSFLDQYVIGQDQAKKVLSVAVYNHYRRITSAP---- 112
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
++++VEL KSNVLL+GPTGSGKTLLA+TLAR + VPF IADATTLT+A
Sbjct: 113 ------------DEEDVELPKSNVLLVGPTGSGKTLLAQTLARLLKVPFAIADATTLTEA 160
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+IL +LL A+++V+AA++G++YIDE+DKI++K+ES +I+RDVSGEGVQQAL
Sbjct: 161 GYVGEDVENILVRLLQAADYDVKAAERGIIYIDEIDKISRKSESPSITRDVSGEGVQQAL 220
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
L++LEGT+ NVP KG RKHP D IQ+DTK+ILFICGGAF LE I+ R IGFG
Sbjct: 221 LRILEGTVANVPPKGGRKHPNQDFIQVDTKNILFICGGAFDGLEPIIARRTNKKVIGFGG 280
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V A D +SL + + + DLI YG IPEFVGR P++V L +L E+ L+++L
Sbjct: 281 DV-----ASAKDLDKRNSLYKDLIADDLITYGFIPEFVGRLPVIVPLESLDEEALIRILQ 335
Query: 545 EPKNAL 550
EP+NAL
Sbjct: 336 EPRNAL 341
>gi|341616022|ref|ZP_08702891.1| ATP-dependent protease ATP-binding subunit ClpX [Citromicrobium sp.
JLT1363]
Length = 422
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 216/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++P+P EIC L+ +VIGQE+AK+VLSVAV+NHYKR+ HA K+G
Sbjct: 63 EVPSPSEICATLNDYVIGQERAKRVLSVAVHNHYKRLKHAG-KQG--------------- 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 DVELAKSNILLVGPTGSGKTLLAQTLARTFDVPFTMADATTLTEAGYVGEDVENIILKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+++NVE AQ G+VYIDE+DKIT+KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 167 QASDYNVEKAQHGIVYIDEIDKITRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT +ILFICGGAF L+K I++R Q SIGFGA V D
Sbjct: 227 GRKHPQQEFLQVDTTNILFICGGAFAGLDKIIADRLQKRSIGFGAHV------ADPDKRR 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LLE E DL+ +GLIPEFVGR P++ SL L D LV +L EPKNA+
Sbjct: 281 IGELLEKSEPEDLLKFGLIPEFVGRLPVIASLHDLDVDALVTILQEPKNAI 331
>gi|262369922|ref|ZP_06063249.1| ATP-dependent protease Clp [Acinetobacter johnsonii SH046]
gi|262314961|gb|EEY96001.1| ATP-dependent protease Clp [Acinetobacter johnsonii SH046]
Length = 438
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 219/290 (75%), Gaps = 17/290 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G +DD
Sbjct: 62 LPKPHEIRAALDQYVIGQDVAKKTLSVAVYNHYKR-----LKATHGGHK-------HDDA 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+T+AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VEIAKSNILLVGPTGSGKTLLAQTMARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 170 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ +
Sbjct: 230 RKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTAEVKKK-----DEGKKL 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 285 SDLFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNAL 334
>gi|188578370|ref|YP_001915299.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas oryzae
pv. oryzae PXO99A]
gi|238689531|sp|B2SMI2.1|CLPX_XANOP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|188522822|gb|ACD60767.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
oryzae pv. oryzae PXO99A]
Length = 428
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ +AK+ L+VAVYNHYKRI + +D+
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRS----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R D+ IGFG V+++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGVKVKSSER-----KQE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+
Sbjct: 285 VGKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAI 335
>gi|410636603|ref|ZP_11347196.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
lipolytica E3]
gi|410143885|dbj|GAC14401.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
lipolytica E3]
Length = 425
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE AKKVLSVAVYNHYKR+ ++ +G
Sbjct: 65 LPKPKEIHAHLDEYVIGQEHAKKVLSVAVYNHYKRLRSGDVHEG---------------- 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELSKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGFGA V+ D
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAAVGSGIGFGATVKNK-----DDKKA 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++ L + VE DL+ YGLIPEF+GR P+L SL L+ED L+++L EPKNAL
Sbjct: 284 SNELFKKVEPEDLVKYGLIPEFIGRLPVLTSLEELSEDALIQILQEPKNAL 334
>gi|389795693|ref|ZP_10198807.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
fulvus Jip2]
gi|388430345|gb|EIL87519.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
fulvus Jip2]
Length = 430
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 215/290 (74%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++V+GQ +AKK L+VAVYNHYKRI D+
Sbjct: 66 LPKPREIRESLDQYVVGQSRAKKALAVAVYNHYKRIESRQ----------------KSDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQSGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTLASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DTK+ILFICGGAF LEK I +R + + IGF A VR+ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLEKVIQQRSETTGIGFSAEVRSKER-----TENL 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL+ +GLIPEFVGR P++ +L L E LVK+LTEPKNA+
Sbjct: 285 GKVLADVEPEDLVRFGLIPEFVGRLPVVATLDELDEAALVKILTEPKNAV 334
>gi|335357124|ref|ZP_08548994.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
animalis KCTC 3501]
Length = 411
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 219/291 (75%), Gaps = 21/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+PTPKEI L+++VIGQE+AKK L+VAVYNHYKRI A TA DD
Sbjct: 60 DVPTPKEIVDILNQYVIGQEQAKKTLAVAVYNHYKRI---------NASFDTA-----DD 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+ EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 106 DTELQKSNICLVGPTGSGKTFLAQSLAKILNVPFTIADATTLTEAGYVGEDVENILLKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE AQ+G+VYIDE+DKI KK+E+++I+RDVSGEGVQQ+LLK+LEGT+ NVP +G
Sbjct: 166 QNADYDVERAQRGIVYIDEIDKIAKKSENVSITRDVSGEGVQQSLLKILEGTVANVPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFI GGAF +E + R D +IGFGA + +
Sbjct: 226 GRKHPQQEFIQIDTTNILFIVGGAFDGIETIVKNRLGDKTIGFGADSKQSYDE------- 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ S+++ + DL+ +GLIPEF+GR PIL +L L+ED LV++LTEPKNAL
Sbjct: 279 SKSIMQQIIPEDLLKFGLIPEFIGRLPILTALEKLSEDDLVRILTEPKNAL 329
>gi|398833400|ref|ZP_10591532.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Herbaspirillum sp. YR522]
gi|398221567|gb|EJN07974.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Herbaspirillum sp. YR522]
Length = 421
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 214/291 (73%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+EI + LD++VIGQ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 DLPTPQEISELLDQYVIGQSNAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +I+FICGGAF L K IS+R + S IGF A V++
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKIISDRSEKSGIGFSAAVKSQTE------KT 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L E DL+ +GLIPE VGR P++ +L+ L E L+++L EPKNAL
Sbjct: 282 ASQVLLGAEPEDLVKFGLIPELVGRLPVIATLSELDEAALIEILIEPKNAL 332
>gi|409436887|ref|ZP_11264046.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhizobium
mesoamericanum STM3625]
gi|408751361|emb|CCM75200.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhizobium
mesoamericanum STM3625]
Length = 425
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 164/292 (56%), Positives = 221/292 (75%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA +
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAT----------------KNSE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAPDDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 333
>gi|113867497|ref|YP_725986.1| ATP-dependent protease ATP-binding subunit ClpX [Ralstonia eutropha
H16]
gi|123033070|sp|Q0KBK3.1|CLPX_RALEH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|113526273|emb|CAJ92618.1| ATP-dependent Clp protease ATP-binding subunit (ClpX) [Ralstonia
eutropha H16]
Length = 425
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 216/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K D
Sbjct: 66 DLPTPHEIRESLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK----------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I +R + IGF A V++ DA
Sbjct: 230 GRKHPNQDFLQVDTTNILFICGGAFDGLEKVIMQRSDKTGIGFAAQVKSKEE---RDA-- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L E DLI +GLIPE +GR P++ +L+ L E L+++L EPKNAL
Sbjct: 285 -SEVLPQTEPEDLIKFGLIPELIGRLPVVATLSKLDEAALMQILVEPKNAL 334
>gi|162148814|ref|YP_001603275.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconacetobacter
diazotrophicus PAl 5]
gi|209545438|ref|YP_002277667.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconacetobacter
diazotrophicus PAl 5]
gi|189044136|sp|A9HRV3.1|CLPX_GLUDA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|161787391|emb|CAP56986.1| ATP-dependent Clp protease ATP-binding subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533115|gb|ACI53052.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Gluconacetobacter diazotrophicus PAl 5]
Length = 419
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 222/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H+ +++
Sbjct: 62 VPTPKEICKVLDDYVIGQFYAKKVLSVAVHNHYKRLAHSQ----------------KNND 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNILLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ++LFICGGAF L+K IS R + S IGFGA V++ D T
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVQS------PDERRT 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++L VE DL+ +GLIPEF+GR P++ +L L E L+++LT+PKNAL
Sbjct: 280 GAILRDVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNAL 329
>gi|338707313|ref|YP_004661514.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
gi|336294117|gb|AEI37224.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
Length = 422
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 217/290 (74%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD++VIGQ KAK+VLSVAV+NHYKR+ H D +
Sbjct: 63 VPTPQEICTILDQYVIGQNKAKRVLSVAVHNHYKRLNHGG----------------KDAD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAETLARTFDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKIT+K+++ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKITRKSDNPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L++ I++R + SIGFGA V + D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDRIIADRLEGKSIGFGAHVAS------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L+ E DL+ +GLIPEFVGR P+L +L L E LV++LTEP+NAL
Sbjct: 281 GKILQECEPEDLLKFGLIPEFVGRLPVLATLEDLDEAALVRILTEPRNAL 330
>gi|332305575|ref|YP_004433426.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola sp.
4H-3-7+YE-5]
gi|410641919|ref|ZP_11352438.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
chathamensis S18K6]
gi|410646704|ref|ZP_11357154.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
agarilytica NO2]
gi|332172904|gb|AEE22158.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Glaciecola
sp. 4H-3-7+YE-5]
gi|410133876|dbj|GAC05553.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
agarilytica NO2]
gi|410138821|dbj|GAC10625.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
chathamensis S18K6]
Length = 425
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/293 (57%), Positives = 222/293 (75%), Gaps = 22/293 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LPTPKEI LD +VIGQE AKKVLSVAVYNHYKR L+ G D
Sbjct: 63 DELPTPKEIHSHLDDYVIGQEHAKKVLSVAVYNHYKR-----LRNG-----------DVH 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LLMGPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGVELGKSNILLMGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFG+ ++ +++
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAHTGTGIGFGSAIK-----DISNK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ LL+ VE DL+ YGLIPEF+GR P+L SL L+E+ L+++L EPKN+L
Sbjct: 282 SKEGELLKKVEPEDLVKYGLIPEFIGRLPVLTSLEELSEEALIQILREPKNSL 334
>gi|126173839|ref|YP_001049988.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella baltica
OS155]
gi|160874745|ref|YP_001554061.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella baltica
OS195]
gi|217973909|ref|YP_002358660.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella baltica
OS223]
gi|373948995|ref|ZP_09608956.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS183]
gi|378707998|ref|YP_005272892.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
baltica OS678]
gi|386325166|ref|YP_006021283.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica BA175]
gi|386340599|ref|YP_006036965.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS117]
gi|418023626|ref|ZP_12662611.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS625]
gi|166215201|sp|A3D306.1|CLPX_SHEB5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|189044150|sp|A9KWH8.1|CLPX_SHEB9 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763862|sp|B8E5E8.1|CLPX_SHEB2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|125997044|gb|ABN61119.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
baltica OS155]
gi|160860267|gb|ABX48801.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
baltica OS195]
gi|217499044|gb|ACK47237.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
baltica OS223]
gi|315266987|gb|ADT93840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
baltica OS678]
gi|333819311|gb|AEG11977.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica BA175]
gi|334863000|gb|AEH13471.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS117]
gi|353537509|gb|EHC07066.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS625]
gi|373885595|gb|EHQ14487.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS183]
Length = 426
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 169/293 (57%), Positives = 221/293 (75%), Gaps = 22/293 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +A+ PK
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNAS--------PK-------- 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGIELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G +
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKEK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL
Sbjct: 282 ATISETLTQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNAL 334
>gi|375106290|ref|ZP_09752551.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Burkholderiales bacterium JOSHI_001]
gi|374667021|gb|EHR71806.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Burkholderiales bacterium JOSHI_001]
Length = 421
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 213/291 (73%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI LD++VIGQE AK+ LSVAVYNHYKR+ H K D
Sbjct: 65 ELPTPSEIKLSLDQYVIGQEAAKRTLSVAVYNHYKRLKHLGGK----------------D 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELTKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++V+ AQ+G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYDVDRAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V + D
Sbjct: 229 GRKHPNQDFLQIDTTNILFICGGAFDGLEKVIQNRTEKSGIGFGASVHSKTEKRAAD--- 285
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ E D+I +GLIPE VGR P++ +L LTE+ ++++LTEPKNAL
Sbjct: 286 ---VFRDAEPEDMIKFGLIPELVGRLPVVATLGELTEEAMIQILTEPKNAL 333
>gi|411001053|gb|AFV98782.1| ClpX [Candidatus Snodgrassella sp. TA1_30860]
Length = 452
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 215/292 (73%), Gaps = 21/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP EI LD++VIGQE AKK L+VAVYNHYKR+ L K G
Sbjct: 94 EKLPTPAEIVANLDQYVIGQETAKKSLAVAVYNHYKRL---RLGKEEG------------ 138
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE I+ KL
Sbjct: 139 -QVELSKSNILLIGPTGSGKTLLAQTLARKLDVPFVMADATTLTEAGYVGEDVEQIITKL 197
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +F+V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 198 LGKCDFDVQKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 257
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + +
Sbjct: 258 GGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSK-----DENT 312
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L ++VE DLI +GLIPE +GR P++ +LT L ED L+ +LTEPKNAL
Sbjct: 313 NVSELFQTVEPEDLIKFGLIPELIGRLPVIATLTELDEDALINILTEPKNAL 364
>gi|398893208|ref|ZP_10646002.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM55]
gi|398184566|gb|EJM72012.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM55]
Length = 427
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 218/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFSAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|110834072|ref|YP_692931.1| ATP-dependent protease ATP-binding subunit ClpX [Alcanivorax
borkumensis SK2]
gi|123345580|sp|Q0VQ89.1|CLPX_ALCBS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|110647183|emb|CAL16659.1| ATP-dependent Clp protease, ATP-binding subunitClpX [Alcanivorax
borkumensis SK2]
Length = 426
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 219/293 (74%), Gaps = 20/293 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
GE LP P EI LD++VIGQE+AKKVL+VAVYNHYKR+ G G
Sbjct: 62 GERLPKPNEIKDTLDEYVIGQERAKKVLAVAVYNHYKRLRSG----GKGR---------- 107
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 108 -DEVELGKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQK 166
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 167 LLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 226
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP+ + +Q+DT ++LFICGGAF L+K I ER + IGF A V++ +
Sbjct: 227 QGGRKHPQQEFLQVDTSNMLFICGGAFAGLDKVIRERSEKGGIGFSAEVKSK-----DNT 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DL+ YGLIPEF+GR P++ +L L+ED L+++LTEP+NAL
Sbjct: 282 RNLGELLVDVEPEDLVKYGLIPEFIGRLPVIATLEELSEDALIQILTEPRNAL 334
>gi|85716434|ref|ZP_01047406.1| ATP-dependent protease ATP-binding subunit [Nitrobacter sp.
Nb-311A]
gi|85696791|gb|EAQ34677.1| ATP-dependent protease ATP-binding subunit [Nitrobacter sp.
Nb-311A]
Length = 400
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 217/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 39 IPTPKEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLNHQT----------------KHND 82
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 83 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 142
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 143 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 202
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 203 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRTTSIGFAAQVLAPEDRRTG----- 257
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL
Sbjct: 258 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNAL 306
>gi|74317694|ref|YP_315434.1| ATP-dependent protease ATP-binding subunit ClpX [Thiobacillus
denitrificans ATCC 25259]
gi|123772958|sp|Q3SI99.1|CLPX_THIDA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|74057189|gb|AAZ97629.1| ClpX, ATPase regulatory subunit [Thiobacillus denitrificans ATCC
25259]
Length = 423
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/291 (59%), Positives = 219/291 (75%), Gaps = 21/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD++VIGQ +AKK L+VAVYNHYKR+ ++ GSG
Sbjct: 62 DLPTPHEISGILDQYVIGQGQAKKALAVAVYNHYKRLRSSS---GSG------------- 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++V+ A+QG+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 166 QKCDYDVDKAKQGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTTASVPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + +Q+DT +ILFICGGAF LEK I R + IGFGA V+ N+ DA
Sbjct: 226 GRKHPNQEFVQVDTSNILFICGGAFSGLEKVIRGRTEKGGIGFGAQVK-NVDENKRDA-- 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI YGLIPEFVGR P++ +L L E LV++LTEPKNAL
Sbjct: 283 --ELLHQVEPEDLIKYGLIPEFVGRLPVVATLDELDEAALVQILTEPKNAL 331
>gi|395649557|ref|ZP_10437407.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 427
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/290 (59%), Positives = 218/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFSAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNAL 334
>gi|399002987|ref|ZP_10705661.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM18]
gi|398123673|gb|EJM13214.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM18]
Length = 427
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 218/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFSAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|350546002|ref|ZP_08915433.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Candidatus
Burkholderia kirkii UZHbot1]
gi|350526223|emb|CCD41032.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Candidatus
Burkholderia kirkii UZHbot1]
Length = 423
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 217/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI L+++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEISDILNQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
++EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DIELSKSNILLIGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILF+CGGAF LEK I +R + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFVCGGAFDGLEKVIIDRTEKIGIGFGASVKSKQD---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPE +GR P++ +L L E LVK+L EPKNAL
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALVKILIEPKNAL 333
>gi|116251455|ref|YP_767293.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium
leguminosarum bv. viciae 3841]
gi|241204074|ref|YP_002975170.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|424874765|ref|ZP_18298427.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|424881044|ref|ZP_18304676.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WU95]
gi|166214809|sp|Q1MIM6.1|CLPX_RHIL3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|115256103|emb|CAK07184.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX
[Rhizobium leguminosarum bv. viciae 3841]
gi|240857964|gb|ACS55631.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|392517407|gb|EIW42139.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WU95]
gi|393170466|gb|EJC70513.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 425
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 221/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------E 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V++ D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGASVKSQ------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 333
>gi|21230440|ref|NP_636357.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66769566|ref|YP_244328.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. campestris str. 8004]
gi|188992774|ref|YP_001904784.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. campestris str. B100]
gi|384426844|ref|YP_005636201.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. raphani 756C]
gi|23813857|sp|Q8PBY5.1|CLPX_XANCP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|81304479|sp|Q4URL5.1|CLPX_XANC8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|229485950|sp|B0RTF5.1|CLPX_XANCB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|21112002|gb|AAM40281.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66574898|gb|AAY50308.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
campestris pv. campestris str. 8004]
gi|167734534|emb|CAP52744.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
campestris pv. campestris]
gi|341935944|gb|AEL06083.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
campestris pv. raphani 756C]
Length = 428
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ +AK+ L+VAVYNHYKRI + +D
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRS----------------KNDE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I R D+ IGFGA V+++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQARSNDAGGIGFGAKVKSSER-----KQE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+
Sbjct: 285 VGKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAI 335
>gi|422010032|ref|ZP_16357014.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
rettgeri Dmel1]
gi|414092205|gb|EKT53884.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
rettgeri Dmel1]
Length = 425
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 222/292 (76%), Gaps = 21/292 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI + LD +VIGQEKAKKVL+VAVYNHYKR+ + + KT+ D
Sbjct: 63 ELPTPHEIRQHLDDYVIGQEKAKKVLAVAVYNHYKRLRNGD---------KTS------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 GVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 QKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAA 498
RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGF A V+ G +D A
Sbjct: 228 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTRSGIGFAAEVK-----GESDKA 282
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL E DLI +GLIPEF+GR P++ +LT L+E+ L+++L EPKNAL
Sbjct: 283 TEGELLTQAEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILKEPKNAL 334
>gi|379012039|ref|YP_005269851.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acetobacterium
woodii DSM 1030]
gi|375302828|gb|AFA48962.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acetobacterium
woodii DSM 1030]
Length = 423
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 166/292 (56%), Positives = 215/292 (73%), Gaps = 21/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+D+P PKEI K L ++VI Q AK+ LSVAVYNHYKRI + +ND
Sbjct: 58 DDVPKPKEIKKKLSEYVIAQNHAKRALSVAVYNHYKRITSMD---------------END 102
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VEL+KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct: 103 PEVELQKSNILLIGPTGSGKTLLAQTLARVLNVPFAIADATSLTEAGYVGEDVENILLKL 162
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A F+V A++G++YIDE+DKI +K ++ +I+RDVSGEGVQQALLK+LEGT+ NVP +
Sbjct: 163 LQAANFDVAKAEKGIIYIDEIDKIARKGDNPSITRDVSGEGVQQALLKILEGTVANVPPQ 222
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ++T ++LFICGGAF ++K I +R SS+GFGA VR N +
Sbjct: 223 GGRKHPHQDFIQINTNNVLFICGGAFDGMDKLIEQRTDKSSMGFGAEVRNNKK------E 276
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L SV+ DL+ YGLIPEF+GR P++ SL L E+ L+++LTEP+NAL
Sbjct: 277 TEDNTLNSVQPQDLLKYGLIPEFIGRIPVIASLEHLDEEALIQILTEPRNAL 328
>gi|256556953|gb|ACU83575.1| ATP-dependent protease Clp ATPase subunit [uncultured bacterium
HF130_AEPn_2]
Length = 427
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/290 (59%), Positives = 218/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFSAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNAL 334
>gi|261346363|ref|ZP_05974007.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Providencia
rustigianii DSM 4541]
gi|282565677|gb|EFB71212.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Providencia
rustigianii DSM 4541]
Length = 425
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 222/292 (76%), Gaps = 21/292 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI + LD +VIGQEKAKKVL+VAVYNHYKR+ + + KT+ D
Sbjct: 63 ELPTPHEIRQHLDDYVIGQEKAKKVLAVAVYNHYKRLRNGD---------KTS------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 GVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 QKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAA 498
RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGF A V+ G ++ A
Sbjct: 228 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTRSGIGFAAEVK-----GESEKA 282
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL E DLI +GLIPEF+GR P++ +LT L+ED L+++L EPKNAL
Sbjct: 283 TEGELLTQAEPEDLIKFGLIPEFIGRLPVVATLTELSEDALIQILKEPKNAL 334
>gi|77463764|ref|YP_353268.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides 2.4.1]
gi|123591634|sp|Q3J1G7.1|CLPX_RHOS4 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|77388182|gb|ABA79367.1| ATP-dependent protease Clp, ATPase subunit [Rhodobacter sphaeroides
2.4.1]
Length = 421
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/301 (56%), Positives = 223/301 (74%), Gaps = 23/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP+EICK LD +VIGQ AK+VLSVAV+NHYKR+ H++
Sbjct: 52 TKSTGLKSADGVPTPREICKVLDDYVIGQMHAKRVLSVAVHNHYKRLNHSS--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
KT ++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 KT--------DIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE Q+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERVQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S IGFGA V+
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGAEVKD- 273
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
DA L + +E DL +GLIPEFVGR P++ +LT L E LV +LTEPKNA
Sbjct: 274 -----PDARGVGELFKELEPEDLPKFGLIPEFVGRLPVIATLTDLDEAALVTILTEPKNA 328
Query: 550 L 550
L
Sbjct: 329 L 329
>gi|388547448|ref|ZP_10150713.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
M47T1]
gi|388274535|gb|EIK94132.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
M47T1]
Length = 427
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/290 (59%), Positives = 219/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTAGGIGFNAEVRSKQEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|330814218|ref|YP_004358457.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Candidatus
Pelagibacter sp. IMCC9063]
gi|327487313|gb|AEA81718.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Candidatus
Pelagibacter sp. IMCC9063]
Length = 380
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 166/292 (56%), Positives = 220/292 (75%), Gaps = 20/292 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P+PKEI LD++VIGQ+ AK++LSVAV+NHYKR+ + +N
Sbjct: 17 EGVPSPKEIFSTLDEYVIGQKTAKQILSVAVHNHYKRLNYE--------------GKNNK 62
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LLMGPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 63 GDVELAKSNILLMGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKL 122
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K E+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 123 LQAADYNVEKAQRGIVYIDEVDKISRKTENPSITRDVSGEGVQQALLKIMEGTVASVPPQ 182
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF ++K IS R + SSIGFG+ + V +
Sbjct: 183 GGRKHPQQEFLQVDTTNILFICGGAFAGIDKIISSRDKGSSIGFGSKLNTKAEKKVGE-- 240
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL+S+E DL+ +GLIPEF+GR PI+ +L L ED LVK+L EPKN+L
Sbjct: 241 ----LLKSIEPEDLLKFGLIPEFIGRLPIISTLEDLDEDSLVKILEEPKNSL 288
>gi|380510629|ref|ZP_09854036.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
sacchari NCPPB 4393]
Length = 428
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ++AK+ L+VAVYNHYKRI +D
Sbjct: 66 LPKPREILEVLDQYVIGQQRAKRTLAVAVYNHYKRIESRQ----------------KNDE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVDKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R D+ IGFGA V++ V
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKS-----VERKRE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+
Sbjct: 285 VGKILADVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAI 335
>gi|398919615|ref|ZP_10658870.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM49]
gi|398923823|ref|ZP_10660916.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM48]
gi|426408622|ref|YP_007028721.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
UW4]
gi|398169637|gb|EJM57615.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM49]
gi|398174660|gb|EJM62449.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM48]
gi|426266839|gb|AFY18916.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
UW4]
Length = 427
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 218/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|398840798|ref|ZP_10598030.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM102]
gi|398109810|gb|EJL99726.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM102]
Length = 427
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 218/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|28870880|ref|NP_793499.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213968835|ref|ZP_03396976.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato T1]
gi|301384119|ref|ZP_07232537.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato Max13]
gi|302059518|ref|ZP_07251059.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato K40]
gi|302135031|ref|ZP_07261021.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|422660629|ref|ZP_16723037.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. lachrymans str. M302278]
gi|38257469|sp|Q87YR7.1|CLPX_PSESM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|28854129|gb|AAO57194.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213926438|gb|EEB59992.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato T1]
gi|331019230|gb|EGH99286.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. lachrymans str. M302278]
Length = 427
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 218/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNAL 334
>gi|170727452|ref|YP_001761478.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella woodyi
ATCC 51908]
gi|238688691|sp|B1KLT6.1|CLPX_SHEWM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|169812799|gb|ACA87383.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
woodyi ATCC 51908]
Length = 426
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 171/291 (58%), Positives = 217/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQEKAKKVLSVAVYNHYKR+ +A PK D
Sbjct: 65 LPTPHELRAHLDDYVIGQEKAKKVLSVAVYNHYKRLKNAG--------PK--------DG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILF+CGGAF LEK I +R + IGFGA V+ G D A
Sbjct: 229 RKHPQQEFLQVDTSKILFVCGGAFSGLEKVIEQRSHTGTGIGFGAQVK-----GEDDKAT 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE DL+ YGLIPEF+GR P+L +L L + L+++L+EPKNAL
Sbjct: 284 ISDTLMQVEPEDLVKYGLIPEFIGRLPVLATLAELDDAALIQILSEPKNAL 334
>gi|269792563|ref|YP_003317467.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100198|gb|ACZ19185.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 429
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 223/310 (71%), Gaps = 22/310 (7%)
Query: 241 SSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHAN 300
S G G G++ S L + +P P E+ LD++VIGQ++AKKVLSVAVYNHY+RI
Sbjct: 54 SLSAGQGIGAKPSLSGLDQ-VPRPDEMKAFLDQYVIGQDQAKKVLSVAVYNHYRRI---- 108
Query: 301 LKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATT 360
A +DD VEL KSNVLL+GPTGSGKTLLA+TLAR + VPF IADATT
Sbjct: 109 ------------TAGPSDDQVELPKSNVLLVGPTGSGKTLLAQTLARLLKVPFAIADATT 156
Query: 361 LTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGV 420
LT+AGYVGEDVE+IL +LL A+++V+AA++G++YIDE+DKI++K+ES +I+RDVSGEGV
Sbjct: 157 LTEAGYVGEDVENILVRLLQAADYDVKAAERGIIYIDEIDKISRKSESPSITRDVSGEGV 216
Query: 421 QQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSI 480
QQALL++LEGT+ NVP KG RKHP D IQ+DTK+ILFICGGAF LE I+ R + I
Sbjct: 217 QQALLRILEGTVSNVPPKGGRKHPNQDFIQVDTKNILFICGGAFDGLEPIIARRTRKKVI 276
Query: 481 GFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLV 540
GFG + A D +SL + + D I YG IPEFVGR P++V L +L E+ LV
Sbjct: 277 GFGGDI-----ASAKDLEKRNSLYRELVADDFITYGFIPEFVGRLPVIVPLDSLDEEALV 331
Query: 541 KVLTEPKNAL 550
++L EPKNAL
Sbjct: 332 RILQEPKNAL 341
>gi|153000123|ref|YP_001365804.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella baltica
OS185]
gi|166215202|sp|A6WLQ2.1|CLPX_SHEB8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|151364741|gb|ABS07741.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
baltica OS185]
Length = 426
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 169/293 (57%), Positives = 221/293 (75%), Gaps = 22/293 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +A+ PK
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNAS--------PK-------- 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGIELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G +
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKEK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL
Sbjct: 282 ATISETLTQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNAL 334
>gi|398860149|ref|ZP_10615807.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM79]
gi|398867304|ref|ZP_10622768.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM78]
gi|398879705|ref|ZP_10634793.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM67]
gi|398886633|ref|ZP_10641500.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM60]
gi|398904000|ref|ZP_10652022.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM50]
gi|398938376|ref|ZP_10667779.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM41(2012)]
gi|398996367|ref|ZP_10699224.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM21]
gi|407364029|ref|ZP_11110561.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mandelii JR-1]
gi|398126898|gb|EJM16319.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM21]
gi|398165924|gb|EJM54034.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM41(2012)]
gi|398176429|gb|EJM64148.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM50]
gi|398188904|gb|EJM76193.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM60]
gi|398195849|gb|EJM82876.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM67]
gi|398235354|gb|EJN21185.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM79]
gi|398237282|gb|EJN23036.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM78]
Length = 427
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 218/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|163759317|ref|ZP_02166403.1| ATP-dependent Clp protease, ATP-binding subunit protein [Hoeflea
phototrophica DFL-43]
gi|162283721|gb|EDQ34006.1| ATP-dependent Clp protease, ATP-binding subunit protein [Hoeflea
phototrophica DFL-43]
Length = 426
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 220/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD++VIGQ +AKK+LSVAV+NHYKR+ H++ K G
Sbjct: 66 VPTPQEIIATLDEYVIGQHQAKKILSVAVHNHYKRLNHSS-KSG---------------E 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILF+CGGAF L+K IS+R + +SIGF A VRA D
Sbjct: 230 RKHPQQEFLQVDTTNILFVCGGAFAGLDKIISDRGEKTSIGFSASVRAQ------DERRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L ++E DL+ +GLIPEF+GR P+L +L L E L+++LTEPKNAL
Sbjct: 284 GEVLRALEPEDLVKFGLIPEFIGRLPVLATLEDLDESALIQILTEPKNAL 333
>gi|346643098|ref|YP_261086.2| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
protegens Pf-5]
gi|341580245|gb|AAY93250.2| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
protegens Pf-5]
Length = 427
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 217/290 (74%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKS---------------DD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNAL 334
>gi|302390302|ref|YP_003826123.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermosediminibacter oceani DSM 16646]
gi|302200930|gb|ADL08500.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermosediminibacter oceani DSM 16646]
Length = 421
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++P P EI + LD++VIGQEKAKK+LSVAVYNHYKRI ++V DD
Sbjct: 60 NIPKPSEIKEILDQYVIGQEKAKKILSVAVYNHYKRI---------------NSSVKTDD 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL+KSN++++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 105 -VELQKSNIIMLGPTGSGKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVENILLKLI 163
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 164 QAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIASVPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF +EK I+ R SIGFGA +R+ V
Sbjct: 224 GRKHPHQEFIQIDTTNILFICGGAFEGIEKIIANRIGKKSIGFGAEIRSKEEKNV----- 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL + DL+ +G+IPEFVGR PI+V+L AL E L+++L EPKNAL
Sbjct: 279 -GELLSQIMPEDLLKFGMIPEFVGRVPIIVTLDALDEQALIRILKEPKNAL 328
>gi|383784112|ref|YP_005468681.1| clpX, ATPase regulatory subunit [Leptospirillum ferrooxidans C2-3]
gi|383083024|dbj|BAM06551.1| clpX, ATPase regulatory subunit [Leptospirillum ferrooxidans C2-3]
Length = 427
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 219/293 (74%), Gaps = 21/293 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G L P EI + LD++V+GQE+AKKVLSVAVYNHYKRI +AN N
Sbjct: 62 GAALLKPVEINRILDQYVVGQERAKKVLSVAVYNHYKRI-NAN---------------QN 105
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VEL+K N+L++GPTG+GKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 SDDVELQKGNILMIGPTGTGKTLLAQTLARILDVPFAIADATTLTEAGYVGEDVENIILK 165
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL A+++VE A++G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ NVP
Sbjct: 166 LLQSADYDVEKAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLVEGTVANVPP 225
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP + IQ+DT +ILFICGGAF+ L+ +S+R + ++GFGA +R V D
Sbjct: 226 QGGRKHPHQEFIQVDTTNILFICGGAFIGLDNIVSQRISNKNLGFGADIRT-----VEDR 280
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL DL+ YGLIPEFVGRFP++ L L ED +++LTEPKNAL
Sbjct: 281 KKVGELLVKSRPDDLLKYGLIPEFVGRFPVMAVLEDLDEDAFLRILTEPKNAL 333
>gi|407775743|ref|ZP_11123035.1| ATP-dependent protease ATP-binding subunit ClpX [Thalassospira
profundimaris WP0211]
gi|407281104|gb|EKF06668.1| ATP-dependent protease ATP-binding subunit ClpX [Thalassospira
profundimaris WP0211]
Length = 421
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 166/292 (56%), Positives = 223/292 (76%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P+EICK LD +VIGQ AKKVLSVAV+NHYKR++H++ +++
Sbjct: 63 VPSPQEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLHHSS----------------KNED 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN++L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IELAKSNIMLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFI GGAF L+K IS+R + S+IGFGA VR RAG
Sbjct: 227 RKHPQQEFLQVDTTNILFIVGGAFAGLDKVISQRGRGSAIGFGADVRGPDERRAG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL+ +GLIPEF+GR P+L +L L + LV++LTEPKNAL
Sbjct: 282 ---DVLREVEPEDLLKFGLIPEFIGRLPVLATLEDLDNEALVQILTEPKNAL 330
>gi|329889320|ref|ZP_08267663.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
diminuta ATCC 11568]
gi|328844621|gb|EGF94185.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
diminuta ATCC 11568]
Length = 422
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 219/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI LD +VIGQ AKKVLSVAV+NHYKR+ HA +++
Sbjct: 63 VPTPKEIRDVLDDYVIGQSHAKKVLSVAVHNHYKRLNHAT----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFI GGAF LEK IS R + +SIGFGA V+ D T
Sbjct: 227 RKHPQQEFLQVDTANILFIVGGAFAGLEKVISARGEGASIGFGAKVKE------IDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L+ VE DL+ +GLIPEF+GR P+L +L L E L+K+LTEPKNAL
Sbjct: 281 GEILKQVEPDDLMRFGLIPEFIGRLPVLATLEDLDEVALIKILTEPKNAL 330
>gi|170078143|ref|YP_001734781.1| ATP-dependent protease ATP-binding subunit ClpX [Synechococcus sp.
PCC 7002]
gi|238692806|sp|B1XN45.1|CLPX_SYNP2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|169885812|gb|ACA99525.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Synechococcus
sp. PCC 7002]
Length = 443
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 218/292 (74%), Gaps = 14/292 (4%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
ED+P P+EI LD+ VIGQ++AKKVLSVAVYNHYKR+ +L + A+P
Sbjct: 75 EDIPKPREIKHYLDEHVIGQDEAKKVLSVAVYNHYKRL---SLMEDDDADPVA------- 124
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D +EL KSN+LL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 125 DGIELHKSNILLIGPTGCGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 184
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +V AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +
Sbjct: 185 LQVADLDVAEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQ 244
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT++ILFICGGAFV L+K I R S+GF P G
Sbjct: 245 GGRKHPYQDCIQIDTRNILFICGGAFVGLDKVIERRVGKKSMGFVRP----GEEGSAKEQ 300
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T+ LL+ + DL+ YG+IPEF+GR P++ SL+ L E+ LV++LT+PKNAL
Sbjct: 301 RTAELLQHLSPEDLVKYGMIPEFIGRIPVIASLSPLDEEALVEILTQPKNAL 352
>gi|406990092|gb|EKE09781.1| hypothetical protein ACD_16C00110G0016 [uncultured bacterium]
Length = 423
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 222/292 (76%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P PK+I + L+ +VIGQ++AKKVLSVAV+NHYKR+ H N +
Sbjct: 61 EGIPAPKQIYEVLNDYVIGQDRAKKVLSVAVHNHYKRLDHRN----------------HS 104
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 105 GDVELSKSNILLVGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 164
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +
Sbjct: 165 LQAADYNVEKAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQ 224
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF +EK IS R + ++IGFGA VR D
Sbjct: 225 GGRKHPQQEFLQVDTTNILFICGGAFAGIEKLISLRGKGTAIGFGADVRG------PDER 278
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T LL+ +E+ DL+ +GLIPEF+GR PI+ +L L E L+++LTEPKNAL
Sbjct: 279 KTGDLLQELETEDLLKFGLIPEFIGRLPIIATLKDLDEGALIEILTEPKNAL 330
>gi|398871357|ref|ZP_10626672.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM74]
gi|398206298|gb|EJM93065.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM74]
Length = 427
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 218/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|56478266|ref|YP_159855.1| ATP-dependent protease ATP-binding subunit ClpX [Aromatoleum
aromaticum EbN1]
gi|62286505|sp|Q5P160.1|CLPX_AZOSE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|56314309|emb|CAI08954.1| ATP-dependent Clp protease ATP-binding,subunit clpX [Aromatoleum
aromaticum EbN1]
Length = 422
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 163/290 (56%), Positives = 219/290 (75%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+EIC+ L+++VIGQ +AK+ LSVAVYNHYKR+ H + +K +
Sbjct: 64 LPTPQEICEILNQYVIGQTQAKRNLSVAVYNHYKRLRHLSGRK---------------EE 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ ++P +G
Sbjct: 169 KCDYDVDKAQHGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASIPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT +ILFICGGAF LEK I R + IGFGA +++ V+++
Sbjct: 229 RKHPNQDFIQIDTTNILFICGGAFDGLEKVIRNRTEKIGIGFGAEIKSREGKNVSES--- 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
VE DLI +GLIPEFVGR P++ +L L E+ L+++L EPKNAL
Sbjct: 286 ---FRQVEPEDLIKFGLIPEFVGRLPVVATLQELDEEALIQILVEPKNAL 332
>gi|423096201|ref|ZP_17083997.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens Q2-87]
gi|423696405|ref|ZP_17670895.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens Q8r1-96]
gi|388003112|gb|EIK64439.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens Q8r1-96]
gi|397884545|gb|EJL01028.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens Q2-87]
Length = 427
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 218/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|336311089|ref|ZP_08566056.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella sp.
HN-41]
gi|335865305|gb|EGM70331.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella sp.
HN-41]
Length = 426
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 169/293 (57%), Positives = 221/293 (75%), Gaps = 22/293 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +++ PK
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNSS--------PK-------- 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G +
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKEK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL
Sbjct: 282 ATISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNAL 334
>gi|20807120|ref|NP_622291.1| ATP-dependent protease ATP-binding subunit ClpX [Thermoanaerobacter
tengcongensis MB4]
gi|254479267|ref|ZP_05092610.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Carboxydibrachium pacificum DSM 12653]
gi|23813862|sp|Q8RC24.1|CLPX_THETN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|20515614|gb|AAM23895.1| ATP-dependent protease Clp, ATPase subunit [Thermoanaerobacter
tengcongensis MB4]
gi|214034805|gb|EEB75536.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Carboxydibrachium pacificum DSM 12653]
Length = 425
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 220/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP PKEI LD++VIGQ++AKK L+VAVYNHYKRI N K S D
Sbjct: 59 DLPKPKEIKAFLDQYVIGQDRAKKALAVAVYNHYKRI---NSKVKS-------------D 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 103 DVELQKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATTLTEAGYVGEDVENILLRLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 163 QAADYDIERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF ++K I R S+GFGA V++ V
Sbjct: 223 GRKHPHQEFIQIDTTNILFICGGAFEGIDKIIESRIGKKSLGFGAEVQSKKEKDV----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L+ + DL+ +G+IPEF+GR PI+V+L LT+D LV++LTEPKNAL
Sbjct: 278 -GEILKHIMPEDLLKFGMIPEFIGRVPIVVTLDPLTKDDLVRILTEPKNAL 327
>gi|167646808|ref|YP_001684471.1| ATP-dependent protease ATP-binding subunit ClpX [Caulobacter sp.
K31]
gi|399090708|ref|ZP_10754132.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Caulobacter
sp. AP07]
gi|189082487|sp|B0SZ62.1|CLPX_CAUSK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167349238|gb|ABZ71973.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Caulobacter
sp. K31]
gi|398027514|gb|EJL21063.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Caulobacter
sp. AP07]
Length = 420
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 218/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC+ LD +VIGQ AKKVL+VAV+NHYKR+ HA+ +++
Sbjct: 63 VPTPREICEVLDDYVIGQNHAKKVLAVAVHNHYKRLNHAS----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG+GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGTGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIVLKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R Q SIGFGA V + T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISARGQGKSIGFGAKV------ADPEERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL +GLIPEF+GR P++ +L L E LVK+LTEPKNA
Sbjct: 281 GEILRGVEPDDLQRFGLIPEFIGRLPVIATLEDLDEAALVKILTEPKNAF 330
>gi|302187982|ref|ZP_07264655.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. syringae 642]
Length = 427
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 218/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNAL 334
>gi|422640407|ref|ZP_16703834.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae Cit 7]
gi|440746733|ref|ZP_20926013.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP39023]
gi|330952798|gb|EGH53058.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae Cit 7]
gi|440370993|gb|ELQ07858.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP39023]
Length = 427
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 218/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNAL 334
>gi|331005197|ref|ZP_08328591.1| ATP-dependent Clp protease ATP-binding subunit ClpX [gamma
proteobacterium IMCC1989]
gi|330420979|gb|EGG95251.1| ATP-dependent Clp protease ATP-binding subunit ClpX [gamma
proteobacterium IMCC1989]
Length = 433
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/299 (56%), Positives = 227/299 (75%), Gaps = 22/299 (7%)
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
GGS+ LPTPKEI + LD++VIGQ +AK+VLSVAVYNHYKR+ +
Sbjct: 63 GGSD---KLPTPKEITEILDQYVIGQFRAKRVLSVAVYNHYKRLRFGD------------ 107
Query: 313 AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVE 372
A + D VEL KSN+L++GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE
Sbjct: 108 TAGKDKDTVELGKSNILMVGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVE 167
Query: 373 SILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI 432
+I+ KLL + +++V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 168 NIIQKLLQKCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTV 227
Query: 433 VNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA 492
+VP +G RKHP+ + +Q+DT +ILF+CGGAF L+K I +R + IGF A V+ +
Sbjct: 228 ASVPPQGGRKHPQQEFLQVDTSNILFVCGGAFAGLDKVIRDRSEKGGIGFNAVVKNKEES 287
Query: 493 -GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
GV +A L+ +ES DL+AYGLIPEFVGR P++ +L L E L+++LTEPKN+L
Sbjct: 288 KGVGEA------LKELESEDLVAYGLIPEFVGRLPMIATLEELDEQALIQILTEPKNSL 340
>gi|66044993|ref|YP_234834.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. syringae B728a]
gi|237803595|ref|ZP_04591180.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|257483814|ref|ZP_05637855.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|289627505|ref|ZP_06460459.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aesculi str. NCPPB 3681]
gi|289649944|ref|ZP_06481287.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aesculi str. 2250]
gi|289679416|ref|ZP_06500306.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. syringae FF5]
gi|416015384|ref|ZP_11562997.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. B076]
gi|416028211|ref|ZP_11571267.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422406895|ref|ZP_16483912.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422583544|ref|ZP_16658667.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|422591340|ref|ZP_16665985.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|422595335|ref|ZP_16669623.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|422606344|ref|ZP_16678354.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. mori str. 301020]
gi|422630347|ref|ZP_16695545.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. pisi str. 1704B]
gi|422645839|ref|ZP_16708974.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|422650230|ref|ZP_16713036.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|422664683|ref|ZP_16724556.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aptata str. DSM 50252]
gi|422683345|ref|ZP_16741606.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|424066810|ref|ZP_17804272.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|424071463|ref|ZP_17808888.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|440721403|ref|ZP_20901802.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP34876]
gi|440724450|ref|ZP_20904732.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP34881]
gi|443644727|ref|ZP_21128577.1| ATP-dependent Clp protease, ATP-binding subunit [Pseudomonas
syringae pv. syringae B64]
gi|81308383|sp|Q4ZVM6.1|CLPX_PSEU2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|63255700|gb|AAY36796.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. syringae B728a]
gi|298159271|gb|EFI00329.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|320325362|gb|EFW81429.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. B076]
gi|320327653|gb|EFW83661.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330868374|gb|EGH03083.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330878773|gb|EGH12922.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|330882124|gb|EGH16273.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330889996|gb|EGH22657.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. mori str. 301020]
gi|330939707|gb|EGH43002.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. pisi str. 1704B]
gi|330959388|gb|EGH59648.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|330963319|gb|EGH63579.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|330975102|gb|EGH75168.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aptata str. DSM 50252]
gi|330985640|gb|EGH83743.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|331012680|gb|EGH92736.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|331025577|gb|EGI05633.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|407998843|gb|EKG39241.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|408001927|gb|EKG42202.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|440363824|gb|ELQ00983.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP34876]
gi|440370094|gb|ELQ07040.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP34881]
gi|443284744|gb|ELS43749.1| ATP-dependent Clp protease, ATP-binding subunit [Pseudomonas
syringae pv. syringae B64]
Length = 427
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 218/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNAL 334
>gi|339021746|ref|ZP_08645738.1| Clp protease ATP-binding subunit ClpX [Acetobacter tropicalis NBRC
101654]
gi|338751242|dbj|GAA09042.1| Clp protease ATP-binding subunit ClpX [Acetobacter tropicalis NBRC
101654]
Length = 421
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 169/294 (57%), Positives = 225/294 (76%), Gaps = 26/294 (8%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTPKEICK LD +VIGQ +AKKVLSVAV+NHYKR+ T +A +ND
Sbjct: 60 EGVPTPKEICKVLDDYVIGQFEAKKVLSVAVHNHYKRL--------------TQSAKNND 105
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 106 --VEIAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L +++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 164 LQASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQ 223
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTD 496
G RKHP+ + +Q+DT ++LFICGGAF L+K I+ R + + IGFGA VR+ + R G
Sbjct: 224 GGRKHPQQEFLQVDTTNMLFICGGAFAGLDKIIAARGKGTGIGFGADVRSPDDRRMG--- 280
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL+ +GLIPEF+GR P+L +L L E L+++LTEPKNAL
Sbjct: 281 -----EILHDVEPEDLMKFGLIPEFIGRLPVLATLGDLDEAALIRILTEPKNAL 329
>gi|194364615|ref|YP_002027225.1| ATP-dependent protease ATP-binding subunit ClpX [Stenotrophomonas
maltophilia R551-3]
gi|238693450|sp|B4SLN2.1|CLPX_STRM5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|194347419|gb|ACF50542.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Stenotrophomonas maltophilia R551-3]
Length = 429
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 216/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ +AK+ L+VAVYNHYKRI +D
Sbjct: 66 LPKPREILEVLDQYVIGQNRAKRTLAVAVYNHYKRIESRQ----------------KNDE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I R D SIGFGA V++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQARSTDVGSIGFGAKVKSAER-----KQE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+
Sbjct: 285 VGKVLAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAI 335
>gi|270291413|ref|ZP_06197635.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pediococcus
acidilactici 7_4]
gi|304385126|ref|ZP_07367472.1| ATP-dependent Clp protease ATP-binding subunit [Pediococcus
acidilactici DSM 20284]
gi|270280259|gb|EFA26095.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pediococcus
acidilactici 7_4]
gi|304329320|gb|EFL96540.1| ATP-dependent Clp protease ATP-binding subunit [Pediococcus
acidilactici DSM 20284]
Length = 421
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 216/291 (74%), Gaps = 19/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++PTP EI LD++VIGQE+AKK LSVAVYNHYKRI K A A DD
Sbjct: 64 NIPTPAEIVDYLDQYVIGQEEAKKTLSVAVYNHYKRIN------------KMAQADAKDD 111
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 112 GPELQKSNISLIGPTGSGKTFLAQSLAKILNVPFAIADATTLTEAGYVGEDVENILLKLL 171
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VEAA+ G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 172 QNADYDVEAAEHGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 231
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ++T +ILFI GGAF +E + R D +IGFG ++
Sbjct: 232 GRKHPQQEFIQINTTNILFIVGGAFDGIETIVKNRLGDKTIGFGTNASTSLDE------- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ SL++ V DL+ +GLIPEF+GR PIL +L LTE+ LV++LTEPKNAL
Sbjct: 285 SKSLMQQVIPEDLLKFGLIPEFIGRLPILTALEKLTEEDLVRILTEPKNAL 335
>gi|407696209|ref|YP_006820997.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Alcanivorax
dieselolei B5]
gi|407253547|gb|AFT70654.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Alcanivorax
dieselolei B5]
Length = 426
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 171/298 (57%), Positives = 226/298 (75%), Gaps = 21/298 (7%)
Query: 254 GSNLG-EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
G N G E LP P EI LD++VIGQE+AKKVLSVAVYNHYKR+
Sbjct: 57 GDNSGQESLPKPDEIKNTLDEYVIGQERAKKVLSVAVYNHYKRL---------------N 101
Query: 313 AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVE 372
+ + D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE
Sbjct: 102 STLRGRDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVE 161
Query: 373 SILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI 432
+I+ KLL + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 162 NIIQKLLQKCDYDVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTV 221
Query: 433 VNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA 492
+VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I +R + IGF A V++ +
Sbjct: 222 ASVPPQGGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRDRSEKGGIGFSAEVKS--KE 279
Query: 493 GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
G D V +L+ VE DL+ YGLIPEF+GR P++ +L L+ED LV++LTEP+NAL
Sbjct: 280 G--DRNVGETLV-GVEPEDLVKYGLIPEFIGRLPVVATLEELSEDALVQILTEPRNAL 334
>gi|317123028|ref|YP_004103031.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermaerobacter marianensis DSM 12885]
gi|315593008|gb|ADU52304.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermaerobacter marianensis DSM 12885]
Length = 419
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 216/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP P EI LD++VIGQE+AKK+L+VAVYNHYKRI+ D
Sbjct: 60 DLPKPAEIKAFLDQYVIGQERAKKILAVAVYNHYKRIHLGG----------------RID 103
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+L++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 104 DVELQKSNILMIGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKLI 163
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G+VYIDE+DKI +KAE+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 QAADYDIERAERGIVYIDEIDKIARKAENPSITRDVSGEGVQQALLKILEGTVASVPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF L+K IS R +GFGA VR+ V
Sbjct: 224 GRKHPHQEFIQIDTTNILFICGGAFEGLDKIISSRIGRRVLGFGAEVRSKQETNV----- 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L + DL+ +GLIPEFVGR P++ +L AL ED LV++LTEPKNAL
Sbjct: 279 -GEILRHIMPEDLLKFGLIPEFVGRLPVIATLDALDEDALVRILTEPKNAL 328
>gi|330808573|ref|YP_004353035.1| ATP-dependent protease ATP-binding subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327376681|gb|AEA68031.1| ATP-dependent protease ATP-binding subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 427
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 218/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|403387722|ref|ZP_10929779.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium sp.
JC122]
Length = 430
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 169/292 (57%), Positives = 222/292 (76%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LP P EI K LD++V+GQ++AKK LSVAVYNHYKRI +N+ +G
Sbjct: 58 ETLPKPAEIKKYLDQYVVGQDEAKKSLSVAVYNHYKRI-SSNVSEG-------------- 102
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL
Sbjct: 103 -DVELQKSNILLLGPTGSGKTLLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLKL 161
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
+ ++++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +
Sbjct: 162 IQNSDYDVEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQ 221
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + IQ++T +ILFICGGAF L+K IS R Q SS+GFGA V+ +
Sbjct: 222 GGRKHPHQEFIQINTSNILFICGGAFDGLDKIISRRTQKSSMGFGADVQTK------EVK 275
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+LL+ + DL+ +GLIPEFVGR PI+V+L AL E LV +L+EPKNAL
Sbjct: 276 DIGALLKEIMPGDLLRFGLIPEFVGRLPIIVTLQALDESALVSILSEPKNAL 327
>gi|119487887|ref|ZP_01621384.1| ClpX, ATPase regulatory subunit [Lyngbya sp. PCC 8106]
gi|119455463|gb|EAW36601.1| ClpX, ATPase regulatory subunit [Lyngbya sp. PCC 8106]
Length = 449
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 165/292 (56%), Positives = 219/292 (75%), Gaps = 8/292 (2%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ +P P +I + LD VIGQ AKKVLSVAVYNHYKR+ +L + S + ++ D
Sbjct: 75 QHIPKPTDIKQYLDDHVIGQHDAKKVLSVAVYNHYKRL---SLDRSS-----LSGNLNLD 126
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL+KSN++L+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVG+DVE+IL +L
Sbjct: 127 DGVELQKSNIMLVGPTGCGKTLLAQTLAKQLDVPFAVADATTLTEAGYVGDDVENILLRL 186
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+F++EAAQ+G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK+LEGTIVNVP +
Sbjct: 187 LQVADFDIEAAQRGIIYIDEIDKISRKSENTSITRDVSGEGVQQALLKILEGTIVNVPPQ 246
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D I++DT ILFICGGAFV LEK I +R S+GF A V
Sbjct: 247 GGRKHPYQDFIEIDTSKILFICGGAFVGLEKVIEQRLGKKSLGFIQSSETANNAAVKSVQ 306
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL+ VE DL+ +GLIPEFVGR P++ ++ L E+ L+++LTEP+NAL
Sbjct: 307 RQDELLQYVEPDDLVKFGLIPEFVGRIPVVTVISPLDEEALMRILTEPQNAL 358
>gi|222528716|ref|YP_002572598.1| ATP-dependent protease ATP-binding subunit ClpX
[Caldicellulosiruptor bescii DSM 6725]
gi|254763830|sp|B9MQ33.1|CLPX_ANATD RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|222455563|gb|ACM59825.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Caldicellulosiruptor bescii DSM 6725]
Length = 433
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 162/290 (55%), Positives = 222/290 (76%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI + LD++V+GQ+ AKK+LSVAVYNHYKRIY+ N KK D+
Sbjct: 61 LPTPKEIKEFLDQYVVGQDHAKKILSVAVYNHYKRIYYHNTKK---------------DD 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 106 VELQKSNILMLGPTGSGKTYLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRLIQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G++YIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 166 NADYDIERAERGIIYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF +EK I +R + ++GF A + + + D
Sbjct: 226 RKHPHQEFIQIDTTNILFICGGAFEGIEKIIEKRIGEKTLGFNAKIESKKEKKIGD---- 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L + DL+ +G+IPEF+GR PI+V+L AL ++ L+K+LTEPKNAL
Sbjct: 282 --ILRQIMPQDLLKFGMIPEFIGRVPIIVTLDALDKEALIKILTEPKNAL 329
>gi|418069409|ref|ZP_12706687.1| ATP-dependent protease ATP-binding subunit ClpX [Pediococcus
acidilactici MA18/5M]
gi|357536878|gb|EHJ20906.1| ATP-dependent protease ATP-binding subunit ClpX [Pediococcus
acidilactici MA18/5M]
Length = 418
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 216/291 (74%), Gaps = 19/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++PTP EI LD++VIGQE+AKK LSVAVYNHYKRI K A A DD
Sbjct: 61 NIPTPAEIVDYLDQYVIGQEEAKKTLSVAVYNHYKRIN------------KMAQADAKDD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 109 GPELQKSNISLIGPTGSGKTFLAQSLAKILNVPFAIADATTLTEAGYVGEDVENILLKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VEAA+ G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 169 QNADYDVEAAEHGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ++T +ILFI GGAF +E + R D +IGFG ++
Sbjct: 229 GRKHPQQEFIQINTTNILFIVGGAFDGIETIVKNRLGDKTIGFGTNASTSLDE------- 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ SL++ V DL+ +GLIPEF+GR PIL +L LTE+ LV++LTEPKNAL
Sbjct: 282 SKSLMQQVIPEDLLKFGLIPEFIGRLPILTALEKLTEEDLVRILTEPKNAL 332
>gi|452964827|gb|EME69860.1| ATP-dependent protease ATP-binding subunit ClpX [Magnetospirillum
sp. SO-1]
Length = 421
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 215/290 (74%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPK+IC LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 VPTPKDICAVLDDYVIGQGHAKKVLSVAVHNHYKRLQHGG----------------KNNE 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
AE+NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AAEYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I R + +SIGFGA VR D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIGSRGRGTSIGFGADVRG------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL+ +GLIPEFVGR P+L +L L D L+ +L++PKNAL
Sbjct: 281 GEILREVEPEDLLKFGLIPEFVGRLPVLATLEDLDVDALIDILSKPKNAL 330
>gi|428211846|ref|YP_007084990.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Oscillatoria
acuminata PCC 6304]
gi|428000227|gb|AFY81070.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Oscillatoria
acuminata PCC 6304]
Length = 446
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 217/290 (74%), Gaps = 13/290 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P+EI K LD+ VIGQ++AKKVLSVAVYNHYKR+ S + K + + +D
Sbjct: 79 MPKPREIKKHLDEHVIGQDEAKKVLSVAVYNHYKRL--------SYTQAKASGKIGAEDP 130
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+LL+GPTG GKTLLA+TLA + VPF +ADATTLT+AGYVGEDVE+IL +LL
Sbjct: 131 VELQKSNILLIGPTGCGKTLLAQTLADVLEVPFAVADATTLTEAGYVGEDVENILLRLLQ 190
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +G
Sbjct: 191 VADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQGG 250
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT +ILFICGGAFV LEK + +R S+GF P A + T
Sbjct: 251 RKHPYQDCIQIDTSNILFICGGAFVGLEKVVEQRTGKKSMGFIQPGDAQ-----SKEKRT 305
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +L++++ DL+ +G+IPEF+GR P+L + L ED L ++LTEPKNAL
Sbjct: 306 ADILKNLQPDDLVKFGMIPEFIGRIPVLAVVDPLDEDALTEILTEPKNAL 355
>gi|389681306|ref|ZP_10172651.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
chlororaphis O6]
gi|399007986|ref|ZP_10710480.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM17]
gi|425900380|ref|ZP_18876971.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|388554842|gb|EIM18090.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
chlororaphis O6]
gi|397890343|gb|EJL06825.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|398119026|gb|EJM08742.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM17]
Length = 427
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 217/290 (74%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNAL 334
>gi|350425874|ref|XP_003494260.1| PREDICTED: hypothetical protein LOC100749102 [Bombus impatiens]
Length = 2402
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP +I K LD++VIGQ++AKKVL+VAVYNHYKR+Y G
Sbjct: 679 LPTPHQIRKHLDQYVIGQDRAKKVLAVAVYNHYKRLYSDKTVNG---------------- 722
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 723 VELGKSNILLIGPTGSGKTLLAETLARRLDVPFAIADATTLTEAGYVGEDVENIVQKLLQ 782
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++VE AQ+G++YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP KG
Sbjct: 783 NCDYDVEKAQRGIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPKGG 842
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS+R ++ IGFGA V++ + A
Sbjct: 843 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRVATNTGIGFGAEVKSEKQ-----NAS 897
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S LL +E DLI +GLIPEF+GR P++ +L+ L E L+++LTEPKNAL
Sbjct: 898 ESDLLAQIEPEDLIKFGLIPEFIGRLPVVATLSELDEKALIQILTEPKNAL 948
>gi|402758021|ref|ZP_10860277.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
NCTC 7422]
Length = 436
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 161/290 (55%), Positives = 217/290 (74%), Gaps = 18/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ K +
Sbjct: 60 LPKPHEIRAALDQYVIGQDVAKKTLSVAVYNHYKRL-------------KVGQSTHGHQE 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ D+
Sbjct: 227 RKHPQQEFIQIDTANILFICGGAFSGLEKIVQQRQEKGGIGFTADVKNK-----DDSKKV 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 282 SELFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNAL 331
>gi|227542943|ref|ZP_03972992.1| ATP-dependent protease ATP-binding subunit [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227181165|gb|EEI62137.1| ATP-dependent protease ATP-binding subunit [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 418
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 164/292 (56%), Positives = 219/292 (75%), Gaps = 19/292 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTPKEI + LD++VIGQ++AKKVLSVAVYNHYKR+ N+ +D
Sbjct: 61 ESLPTPKEIKEFLDEYVIGQDEAKKVLSVAVYNHYKRVKLQNV-------------FGSD 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL+KSN+LL+GPTG GKT LA+TLA+ ++VPF IADAT+LT+AGYVGEDVE+IL +L
Sbjct: 108 DGVELQKSNILLLGPTGCGKTYLAQTLAKKLDVPFTIADATSLTEAGYVGEDVENILLRL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+F+V+ A+ G+VYIDE+DKIT+K E+++I+RDVSGEGVQQALLK+LEGT+ ++P +
Sbjct: 168 LQAADFDVKKAEHGIVYIDEIDKITRKGENVSITRDVSGEGVQQALLKILEGTVASIPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + IQ+DT +ILFI GAF LEK I ER S+GFGA +R+N +
Sbjct: 228 GGRKHPNQELIQVDTSNILFIASGAFAGLEKVIQERVGKKSLGFGADIRSN------EEL 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+++L+ V+ DL+ +GLIPEF+GR P+ ++ L + LV VLTEPKN+L
Sbjct: 282 ENANILQKVQPEDLVKFGLIPEFIGRLPVTATVNQLDKKALVSVLTEPKNSL 333
>gi|347760101|ref|YP_004867662.1| Clp protease ATP-binding subunit [Gluconacetobacter xylinus NBRC
3288]
gi|347579071|dbj|BAK83292.1| Clp protease ATP-binding subunit [Gluconacetobacter xylinus NBRC
3288]
Length = 431
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 163/290 (56%), Positives = 221/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ AKKVLSVAV+NHYKR+ HA +++
Sbjct: 74 VPTPREICKILDDYVIGQAHAKKVLSVAVHNHYKRLAHAQ----------------KNND 117
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 118 VEIAKSNIMLLGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 177
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 178 AADYNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 237
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ++LFICGGAF L+K IS R + S IGFGA V++ D
Sbjct: 238 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVQS------PDERRM 291
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++L VE DL+ +GLIPEF+GR P++ +L L E L+++LT+PKNAL
Sbjct: 292 GAVLRDVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNAL 341
>gi|408823479|ref|ZP_11208369.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
geniculata N1]
Length = 429
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ +AK+ L+VAVYNHYKRI +D+
Sbjct: 66 LPKPREILEVLDQYVIGQNRAKRTLAVAVYNHYKRIESRQ----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L++ I R D SIGFGA V+++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDRVIQARSTDVGSIGFGAKVKSSER-----KQE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPEFVGR P++ +L L E L+++LTEPKNA+
Sbjct: 285 VGKVLAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIRILTEPKNAI 335
>gi|326432268|gb|EGD77838.1| ATP-dependent protease ATP-binding subunit [Salpingoeca sp. ATCC
50818]
Length = 603
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 173/299 (57%), Positives = 219/299 (73%), Gaps = 21/299 (7%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKT 311
WG S P PKEI L+ +VIGQ+ AKK L+VAVYNHYKR+ ANLK+ S +
Sbjct: 220 WGPST-----PKPKEILDNLNDYVIGQDHAKKTLAVAVYNHYKRV-SANLKEAS-----S 268
Query: 312 AAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDV 371
+AA D V+ EKSN+LL GPTGSGKTLLA+TLA +NVPF I+D TTLTQAGYVGEDV
Sbjct: 269 SAAHD----VQFEKSNILLAGPTGSGKTLLARTLANILNVPFAISDCTTLTQAGYVGEDV 324
Query: 372 ESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
ES+LY+LL +F+++ AQ+G+V++DE+DKI+ + S +RDVSGEGVQQALLK+LEGT
Sbjct: 325 ESVLYRLLQACDFDLDRAQRGIVFLDEIDKISSISGSGVATRDVSGEGVQQALLKLLEGT 384
Query: 432 IVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR 491
+VNVPEKG RK PRG++IQ+DT +ILFI GAF LE I +R + SIGF A ++
Sbjct: 385 VVNVPEKGGRKSPRGETIQIDTSNILFIASGAFNGLEDLIKKREEKGSIGFNAALK---- 440
Query: 492 AGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ V +L V++ DL+ +GLIPEFVGRFP +V L ALTE LV+VLTEPKN+L
Sbjct: 441 --TPNKPVDGQMLRKVQADDLVKFGLIPEFVGRFPCVVHLEALTESDLVRVLTEPKNSL 497
>gi|94310822|ref|YP_584032.1| ATP-dependent protease ATP-binding subunit ClpX [Cupriavidus
metallidurans CH34]
gi|166214808|sp|Q1LM63.1|CLPX_RALME RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|93354674|gb|ABF08763.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Cupriavidus metallidurans CH34]
Length = 425
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 214/291 (73%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI + LD++VIGQ++AKK+L+VAVYNHYKR+ H K D
Sbjct: 66 DLPTPHEIRESLDQYVIGQDQAKKILAVAVYNHYKRLKHLGKK----------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I +R + IGF A V++ V
Sbjct: 230 GRKHPNQDFLQVDTTNILFICGGAFDGLEKVIMQRSDKTGIGFAAQVQSKEEREV----- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L E DLI +GLIPE +GR P++ +L L E L+++L EPKNAL
Sbjct: 285 -SEVLPQTEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMQILIEPKNAL 334
>gi|77459918|ref|YP_349425.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
fluorescens Pf0-1]
gi|398974166|ref|ZP_10684903.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM25]
gi|123730994|sp|Q3K9X0.1|CLPX_PSEPF RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|77383921|gb|ABA75434.1| ATP-dependent specificity component of clpP serine protease,
chaperone [Pseudomonas fluorescens Pf0-1]
gi|398142050|gb|EJM30955.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM25]
Length = 427
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 217/290 (74%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKA---------------DD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|340363011|ref|ZP_08685365.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria macacae
ATCC 33926]
gi|419798423|ref|ZP_14323834.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
sicca VK64]
gi|339886699|gb|EGQ76329.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria macacae
ATCC 33926]
gi|385694724|gb|EIG25309.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
sicca VK64]
Length = 422
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 214/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK + N
Sbjct: 63 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKA------NGN 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 107 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 227 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L E VE DLI +GLIPE +GR P++ +L L ED LV +LTEPKNAL
Sbjct: 282 TGLFEIVEPEDLIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNAL 331
>gi|261379792|ref|ZP_05984365.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
subflava NJ9703]
gi|284797477|gb|EFC52824.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
subflava NJ9703]
Length = 421
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/296 (56%), Positives = 216/296 (72%), Gaps = 21/296 (7%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
N + LPTP EI L+ VIGQE AKK L+V+VYNHYKR+ H PK
Sbjct: 59 ENTEKKLPTPAEIVANLNDHVIGQEHAKKALAVSVYNHYKRLRH----------PKA--- 105
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
+ VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I
Sbjct: 106 ---EGKVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQI 162
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +
Sbjct: 163 ITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAS 222
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V +
Sbjct: 223 VPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSK----- 277
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ A S+L E+VE DLI +GLIPE +GR P++ +L L ED LV +LTEPKNAL
Sbjct: 278 DENADISALFETVEPEDLIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNAL 333
>gi|104781014|ref|YP_607512.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
entomophila L48]
gi|95110001|emb|CAK14706.1| ATP-dependent Clp protease ATP-binding subunit [Pseudomonas
entomophila L48]
Length = 442
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/290 (59%), Positives = 218/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 80 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 124
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 125 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 184
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 185 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 244
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 245 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFSAEVRSKEEG----KKVG 300
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 301 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 349
>gi|241760359|ref|ZP_04758454.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
flavescens SK114]
gi|241319237|gb|EER55715.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
flavescens SK114]
Length = 421
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/296 (56%), Positives = 216/296 (72%), Gaps = 21/296 (7%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
N + LPTP EI L+ VIGQE AKK L+V+VYNHYKR+ H PK
Sbjct: 59 ENAEKKLPTPAEIVANLNDHVIGQEHAKKALAVSVYNHYKRLRH----------PKA--- 105
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
+ VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I
Sbjct: 106 ---EGKVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQI 162
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +
Sbjct: 163 ITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAS 222
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V +
Sbjct: 223 VPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSK----- 277
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ A S+L E+VE DLI +GLIPE +GR P++ +L L ED LV +LTEPKNAL
Sbjct: 278 DENADISALFETVEPEDLIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNAL 333
>gi|329121862|ref|ZP_08250477.1| ATP-dependent Clp protease ATP-binding subunit [Dialister
micraerophilus DSM 19965]
gi|327467800|gb|EGF13292.1| ATP-dependent Clp protease ATP-binding subunit [Dialister
micraerophilus DSM 19965]
Length = 411
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 162/290 (55%), Positives = 223/290 (76%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + +D++VI QE+AK L+VAVYNHYKRI + +K G +D+
Sbjct: 61 LPTPVEIKEYMDQYVIDQEEAKIALAVAVYNHYKRIKY---EKDGG-----------NDD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN++++GPTGSGKTLLA+TLAR ++VPF I+DATTLT+AGYVGEDVE+IL +L+
Sbjct: 107 VELQKSNIIMLGPTGSGKTLLAQTLARFLDVPFAISDATTLTEAGYVGEDVENILLRLIQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 167 AADYDLEKAERGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVANVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT ILFICGGAF ++K +++R S++GFGA ++ V
Sbjct: 227 RKHPNQEMIQLDTSKILFICGGAFAGMDKVVAKRLTKSAVGFGADIKKKEEKDV------ 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +L VE DL+ +GLIPEF+GR PILV+L+ L+ED LV++LT+PKNAL
Sbjct: 281 AKILNMVEPEDLLKFGLIPEFIGRLPILVALSPLSEDALVRILTQPKNAL 330
>gi|197284028|ref|YP_002149900.1| ATP-dependent protease ATP-binding subunit ClpX [Proteus mirabilis
HI4320]
gi|227358101|ref|ZP_03842443.1| ATP-dependent Clp protease ATP-binding subunit [Proteus mirabilis
ATCC 29906]
gi|425066921|ref|ZP_18470037.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Proteus
mirabilis WGLW6]
gi|425073646|ref|ZP_18476752.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Proteus
mirabilis WGLW4]
gi|238693153|sp|B4EU54.1|CLPX_PROMH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|194681515|emb|CAR40395.1| ATP-dependent Clp protease ATP-binding subunit [Proteus mirabilis
HI4320]
gi|227161836|gb|EEI46868.1| ATP-dependent Clp protease ATP-binding subunit [Proteus mirabilis
ATCC 29906]
gi|404594917|gb|EKA95472.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Proteus
mirabilis WGLW4]
gi|404601592|gb|EKB01984.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Proteus
mirabilis WGLW6]
Length = 423
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 169/292 (57%), Positives = 220/292 (75%), Gaps = 22/292 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI K LD +VIGQE AKKVL+VAVYNHYKR L+ G D D
Sbjct: 63 ELPTPHEIRKHLDDYVIGQELAKKVLAVAVYNHYKR-----LRNG-----------DKAD 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++V+ AQ+G+VYIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKITRKSENPSITRDVSGEGVQQALLKLVEGTVASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTDAA 498
RKHP+ + +Q+DT ILFICGGAF L+K +++R S IGFGA V++ + A
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVVAQRLNTHSGIGFGAEVKSQ-----NEKA 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L ED L+++L EPKNAL
Sbjct: 282 SEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLGELNEDALIQILQEPKNAL 333
>gi|225075808|ref|ZP_03719007.1| hypothetical protein NEIFLAOT_00824 [Neisseria flavescens
NRL30031/H210]
gi|224952841|gb|EEG34050.1| hypothetical protein NEIFLAOT_00824 [Neisseria flavescens
NRL30031/H210]
Length = 421
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/296 (56%), Positives = 216/296 (72%), Gaps = 21/296 (7%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
N + LPTP EI L+ VIGQE AKK L+V+VYNHYKR+ H PK
Sbjct: 59 ENTEKKLPTPAEIVANLNDHVIGQEHAKKALAVSVYNHYKRLRH----------PKA--- 105
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
+ VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I
Sbjct: 106 ---EGKVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQI 162
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +
Sbjct: 163 ITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAS 222
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V +
Sbjct: 223 VPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSK----- 277
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ A S+L E+VE DLI +GLIPE +GR P++ +L L ED LV +LTEPKNAL
Sbjct: 278 DENADISALFETVEPEDLIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNAL 333
>gi|255066288|ref|ZP_05318143.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
sicca ATCC 29256]
gi|255049498|gb|EET44962.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
sicca ATCC 29256]
Length = 422
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 214/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK + N
Sbjct: 63 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKA------NGN 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 107 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 227 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L E VE DLI +GLIPE +GR P++ +L L ED LV +LTEPKNAL
Sbjct: 282 TGLFEIVEPEDLIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNAL 331
>gi|149926125|ref|ZP_01914387.1| ATP-dependent protease ATP-binding subunit [Limnobacter sp. MED105]
gi|149824943|gb|EDM84155.1| ATP-dependent protease ATP-binding subunit [Limnobacter sp. MED105]
Length = 423
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 165/293 (56%), Positives = 218/293 (74%), Gaps = 22/293 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ LPTP+EI LD++VIGQ+KAK+VL+VAVYNHYKR+ H + K
Sbjct: 60 GDKLPTPQEIRSILDQYVIGQDKAKRVLAVAVYNHYKRLRHMSKK--------------- 104
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D++EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ K
Sbjct: 105 -DDIELTKSNILLVGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQK 163
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 164 LLQSCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 223
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP D +Q+DT ++LFI GGAF L+K I R + S IGFGA V++ V
Sbjct: 224 QGGRKHPNQDFVQIDTTNVLFIVGGAFEGLDKVIRNRSERSGIGFGATVKSKEEGNV--- 280
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+LL VE DLI +G+IPE VGR P++ +L L E L+++LT+PKNA+
Sbjct: 281 ---GTLLAEVEPEDLIKFGIIPELVGRLPVIATLEELDEPALIEILTKPKNAM 330
>gi|395495007|ref|ZP_10426586.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
PAMC 25886]
gi|395794595|ref|ZP_10473916.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
Ag1]
gi|421137892|ref|ZP_15597968.1| ATP-dependent protease ATP-binding subunit [Pseudomonas fluorescens
BBc6R8]
gi|395341260|gb|EJF73080.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
Ag1]
gi|404510951|gb|EKA24845.1| ATP-dependent protease ATP-binding subunit [Pseudomonas fluorescens
BBc6R8]
Length = 427
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 217/290 (74%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKS---------------DD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFSAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|85713355|ref|ZP_01044369.1| ATP-dependent protease ATP-binding subunit [Idiomarina baltica
OS145]
gi|85692822|gb|EAQ30806.1| ATP-dependent protease ATP-binding subunit [Idiomarina baltica
OS145]
Length = 425
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 221/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI K LD +VIGQE+AKKVLSVAVYNHYKR+ +A G G D+
Sbjct: 64 LPVPKEIRKHLDDYVIGQERAKKVLSVAVYNHYKRLRNA----GKGK-----------DD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKT LA+T+AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTFLAETMARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE A++G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILF+CGGAF LE+ I +R + IGFGA V++ ++A
Sbjct: 229 RKHPQQEFLQVDTSKILFVCGGAFAGLERVIEQRLATGTGIGFGAQVKS------PNSAA 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S ++ VE DL+ YGLIPEF+GR P++ +L L ED LV++L EPKNAL
Sbjct: 283 QSEIISQVEPEDLVRYGLIPEFIGRLPVVATLDELNEDALVEILREPKNAL 333
>gi|404399558|ref|ZP_10991142.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
fuscovaginae UPB0736]
Length = 427
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 217/290 (74%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKS---------------DD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFTAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|393773237|ref|ZP_10361635.1| ATP-dependent protease ATP-binding subunit ClpX [Novosphingobium
sp. Rr 2-17]
gi|392721117|gb|EIZ78584.1| ATP-dependent protease ATP-binding subunit ClpX [Novosphingobium
sp. Rr 2-17]
Length = 420
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++ +P+EIC+ L+ +VIGQE+AK+VLSVAV+NHYKR+ H+ K+G
Sbjct: 63 EIVSPREICETLNDYVIGQERAKRVLSVAVHNHYKRLKHSG-KQG--------------- 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLA+ +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 DVELSKSNILLVGPTGSGKTLLAQTLAKTFDVPFTMADATTLTEAGYVGEDVENIILKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+++NVE AQQG+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 167 QSSDYNVEKAQQGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT +ILFICGGAF L+K IS+R Q SIGFGA V D
Sbjct: 227 GRKHPQQEFLQVDTTNILFICGGAFAGLDKIISDRLQKRSIGFGAHV------ADPDKRR 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL+ E DL+ +GLIPEFVGR P++ +L L + LVK+L EPKNAL
Sbjct: 281 VGELLQKAEPEDLLKFGLIPEFVGRLPVIATLNDLDIEALVKILKEPKNAL 331
>gi|349610130|ref|ZP_08889490.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria sp.
GT4A_CT1]
gi|348610719|gb|EGY60403.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria sp.
GT4A_CT1]
Length = 415
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 214/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK + N
Sbjct: 63 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKA------NGN 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 107 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 227 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L E VE DLI +GLIPE +GR P++ +L L ED LV +LTEPKNAL
Sbjct: 282 TGLFEIVEPEDLIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNAL 331
>gi|227488330|ref|ZP_03918646.1| ATP-dependent protease ATP-binding subunit [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227091692|gb|EEI27004.1| ATP-dependent protease ATP-binding subunit [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 418
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 164/292 (56%), Positives = 219/292 (75%), Gaps = 19/292 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTPKEI + LD++VIGQ++AKKVLSVAVYNHYKR+ N+ +D
Sbjct: 61 ESLPTPKEIKEFLDEYVIGQDEAKKVLSVAVYNHYKRVKLQNV-------------FGSD 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL+KSN+LL+GPTG GKT LA+TLA+ ++VPF IADAT+LT+AGYVGEDVE+IL +L
Sbjct: 108 DGVELQKSNILLLGPTGCGKTYLAQTLAKKLDVPFTIADATSLTEAGYVGEDVENILLRL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+F+V+ A+ G+VYIDE+DKIT+K E+++I+RDVSGEGVQQALLK+LEGT+ ++P +
Sbjct: 168 LQAADFDVKKAEHGIVYIDEIDKITRKGENVSITRDVSGEGVQQALLKILEGTVASIPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + IQ+DT +ILFI GAF LEK I ER S+GFGA +R+N +
Sbjct: 228 GGRKHPNQELIQVDTSNILFIASGAFAGLEKVIQERVGKKSLGFGADIRSN------EEL 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+++L+ V+ DL+ +GLIPEF+GR P+ ++ L + LV VLTEPKN+L
Sbjct: 282 ENANILQKVQPEDLVKFGLIPEFIGRLPVTATVNQLDKKALVSVLTEPKNSL 333
>gi|226953944|ref|ZP_03824408.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter sp.
ATCC 27244]
gi|226835298|gb|EEH67681.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter sp.
ATCC 27244]
Length = 436
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 163/290 (56%), Positives = 217/290 (74%), Gaps = 18/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G
Sbjct: 60 LPKPHEIRAALDQYVIGQDIAKKTLSVAVYNHYKR-----LKAGQSGH--------THKE 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ D+
Sbjct: 227 RKHPQQEFIQIDTANILFICGGAFSGLEKIVQQRQEKGGIGFTADVKNK-----DDSKKV 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 282 SELFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNAL 331
>gi|226939793|ref|YP_002794866.1| ClpX [Laribacter hongkongensis HLHK9]
gi|226714719|gb|ACO73857.1| ClpX [Laribacter hongkongensis HLHK9]
Length = 422
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 166/294 (56%), Positives = 216/294 (73%), Gaps = 20/294 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LP+P+EI + LD++VIGQE+AKK LSVAVYNHYKR+ A D+
Sbjct: 63 EHLPSPREIREALDQYVIGQEQAKKALSVAVYNHYKRLN---------------AKSDDK 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVESI+ KL
Sbjct: 108 NEVELSKSNILLIGPTGSGKTLLAQTLARVLDVPFAIADATTLTEAGYVGEDVESIITKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++ + AQ+G++YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ NVP +
Sbjct: 168 LQKCDYDAQKAQRGIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTVANVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RK+P + IQ+DT +ILFICGGAF LEK I +R + IGFGA V A D
Sbjct: 228 GGRKNPNAEFIQVDTTNILFICGGAFDGLEKIIRQRTEKGGIGFGAEV-----ASKNDQK 282
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
LL E DLI +GLIPEF+GR P++ L L E+ L+ +LTEPKNAL +
Sbjct: 283 AVGELLRDTEPEDLIKFGLIPEFIGRLPVVALLEPLDEEALMTILTEPKNALAK 336
>gi|398849722|ref|ZP_10606451.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM80]
gi|398966270|ref|ZP_10681429.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM30]
gi|398985562|ref|ZP_10691097.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM24]
gi|399015405|ref|ZP_10717678.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM16]
gi|424922479|ref|ZP_18345840.1| ClpX [Pseudomonas fluorescens R124]
gi|398108656|gb|EJL98609.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM16]
gi|398146238|gb|EJM34994.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM30]
gi|398153941|gb|EJM42432.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM24]
gi|398250437|gb|EJN35757.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM80]
gi|404303639|gb|EJZ57601.1| ClpX [Pseudomonas fluorescens R124]
Length = 427
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 217/290 (74%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKA---------------DD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|349685704|ref|ZP_08896846.1| Clp protease ATP-binding subunit [Gluconacetobacter oboediens
174Bp2]
Length = 419
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 163/290 (56%), Positives = 221/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ AKKVLSVAV+NHYKR+ HA +++
Sbjct: 62 VPTPREICKILDDYVIGQAHAKKVLSVAVHNHYKRLAHAQ----------------KNND 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 AADYNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ++LFICGGAF L+K IS R + S IGFGA V++ D
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVQS------PDERRM 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++L VE DL+ +GLIPEF+GR P++ +L L E L+++LT+PKNAL
Sbjct: 280 GAVLRDVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNAL 329
>gi|171463606|ref|YP_001797719.1| ATP-dependent protease ATP-binding subunit ClpX [Polynucleobacter
necessarius subsp. necessarius STIR1]
gi|226706593|sp|B1XUS8.1|CLPX_POLNS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|171193144|gb|ACB44105.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 453
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/302 (56%), Positives = 221/302 (73%), Gaps = 18/302 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI-YHANLKK-----------GSGAE 308
LPTP +I K LD++VIGQ+ AKK L+VAVYNHYKR+ Y KK GS +
Sbjct: 65 LPTPHQIRKNLDQYVIGQDHAKKTLAVAVYNHYKRLQYLPKPKKEKLDKDGKPVEGSDKK 124
Query: 309 PKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVG 368
A D+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVG
Sbjct: 125 ESKLPAKAMVDDVELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVG 184
Query: 369 EDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 428
EDVE+I+ KLL ++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++
Sbjct: 185 EDVENIIQKLLQACDYNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLV 244
Query: 429 EGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA 488
EGT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I +R + IGF A V
Sbjct: 245 EGTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKVIQQRTAKTGIGFNATVPG 304
Query: 489 NMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKN 548
GV+D LL VE DLI +GLIPE +GR P++ +L L E+ L+++LTEPKN
Sbjct: 305 KDDRGVSD------LLIEVEPEDLIKFGLIPELIGRLPVVATLAQLDEEALIQILTEPKN 358
Query: 549 AL 550
AL
Sbjct: 359 AL 360
>gi|427439827|ref|ZP_18924391.1| ATP-dependent protease ATP-binding subunit ClpX [Pediococcus lolii
NGRI 0510Q]
gi|425787959|dbj|GAC45179.1| ATP-dependent protease ATP-binding subunit ClpX [Pediococcus lolii
NGRI 0510Q]
Length = 418
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 216/291 (74%), Gaps = 19/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++PTP EI LD++VIGQE+AKK LSVAVYNHYKRI K A A DD
Sbjct: 61 NIPTPAEIVDYLDQYVIGQEEAKKTLSVAVYNHYKRIN------------KMAQADAKDD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 109 GPELQKSNISLIGPTGSGKTFLAQSLAKILNVPFAIADATTLTEAGYVGEDVENILLKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VEAA+ G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 169 QNADYDVEAAEHGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ++T +ILFI GGAF +E + R D +IGFG ++
Sbjct: 229 GRKHPQQEFIQINTTNILFIVGGAFDGIETIVKNRLGDKTIGFGTNASTSLDE------- 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ SL++ V DL+ +GLIPEF+GR PIL +L LTE+ LV++LTEPKNAL
Sbjct: 282 SKSLMQQVIPEDLLKFGLIPEFIGRLPILTALEKLTEEDLVRILTEPKNAL 332
>gi|378951823|ref|YP_005209311.1| protein ClpX [Pseudomonas fluorescens F113]
gi|359761837|gb|AEV63916.1| ClpX [Pseudomonas fluorescens F113]
Length = 427
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 217/290 (74%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKS---------------DD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|407798619|ref|ZP_11145526.1| ClpX [Oceaniovalibus guishaninsula JLT2003]
gi|407059580|gb|EKE45509.1| ClpX [Oceaniovalibus guishaninsula JLT2003]
Length = 420
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 164/301 (54%), Positives = 222/301 (73%), Gaps = 23/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G G+ +PTP+EIC LD +VIGQ AK+VLSVAV+NHYKR+ A
Sbjct: 51 TKATGIKSGDGVPTPREICDVLDDYVIGQMHAKRVLSVAVHNHYKRLNQAG--------- 101
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 102 --------KSDIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 153
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 154 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 213
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILF+CGGAF L++ I++R + SS+GFGA V+A
Sbjct: 214 GTVASVPPQGGRKHPQQEFLQVDTTNILFVCGGAFAGLDRIIAQRGKGSSMGFGAEVKAP 273
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
+ D + +E DL+ +GLIPEFVGR P++ +L L ED LV +LT+PKNA
Sbjct: 274 DEKSIGD------FFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILTKPKNA 327
Query: 550 L 550
L
Sbjct: 328 L 328
>gi|148652117|ref|YP_001279210.1| ATP-dependent protease ATP-binding subunit ClpX [Psychrobacter sp.
PRwf-1]
gi|172048458|sp|A5WC69.1|CLPX_PSYWF RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|148571201|gb|ABQ93260.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Psychrobacter
sp. PRwf-1]
Length = 425
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/295 (56%), Positives = 219/295 (74%), Gaps = 10/295 (3%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
L + LPTPKEI + LD +VIGQE AKK LSVAVYNHYKR+ A AE K A +
Sbjct: 61 LTKKLPTPKEIREHLDGYVIGQETAKKALSVAVYNHYKRLKVA----AKLAEDKKQAKLG 116
Query: 317 NDDN-VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESIL 375
DD VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 117 ADDAMVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFAMADATTLTEAGYVGEDVENIV 176
Query: 376 YKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV 435
KLL A+++VE A+QG++Y+DE+DKI+KK E+++I+RDVSGEGVQQALLK++EGT+ +
Sbjct: 177 QKLLQAADYDVEKAEQGIIYVDEIDKISKKGENMSITRDVSGEGVQQALLKLIEGTVAAI 236
Query: 436 PEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVT 495
P G RKHP + IQ+DT +IL I GGAF L+K I +R + + IGF A V++
Sbjct: 237 PPHGGRKHPNQELIQVDTSNILIIVGGAFSGLDKVIQQRTEKTGIGFNAEVKSK-----D 291
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
D S L + VE DLI +GLIPE +GR P++ +L L E+ L+++LTEPKNA+
Sbjct: 292 DGKQLSELFKQVEPEDLIKFGLIPELIGRLPVIATLEELDEEALMQILTEPKNAI 346
>gi|261365228|ref|ZP_05978111.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
mucosa ATCC 25996]
gi|288566311|gb|EFC87871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
mucosa ATCC 25996]
Length = 422
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 214/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK + N
Sbjct: 63 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKA------NGN 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 107 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 227 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L E VE DLI +GLIPE +GR P++ +L L ED LV +LTEPKNAL
Sbjct: 282 TGLFEIVEPEDLIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNAL 331
>gi|290474662|ref|YP_003467542.1| ATPase, chaperone subunit of serine protease [Xenorhabdus bovienii
SS-2004]
gi|289173975|emb|CBJ80762.1| ATPase, chaperone subunit of serine protease [Xenorhabdus bovienii
SS-2004]
Length = 423
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 221/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + LD +VIGQE AKKVL+VAVYNHYKR L+ G D ++
Sbjct: 64 LPTPHEIRQHLDDYVIGQETAKKVLAVAVYNHYKR-----LRNG-----------DTNNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS+R SS IGF A V+ G ++ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRLNVSSGIGFSATVK-----GESEKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL E DLI +GLIPEF+GR P++ +LT L+ED L+++L EPKNAL
Sbjct: 283 EGELLAQAEPEDLIKFGLIPEFIGRLPVVATLTELSEDALIQILQEPKNAL 333
>gi|298369174|ref|ZP_06980492.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria sp.
oral taxon 014 str. F0314]
gi|298283177|gb|EFI24664.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria sp.
oral taxon 014 str. F0314]
Length = 424
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 214/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK + N
Sbjct: 62 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKA------NGN 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 106 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 226 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L E VE DLI +GLIPE +GR P++ +L L ED LV +LTEPKNAL
Sbjct: 281 TGLFEIVEPEDLIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNAL 330
>gi|423067860|ref|ZP_17056650.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Arthrospira
platensis C1]
gi|406710603|gb|EKD05810.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Arthrospira
platensis C1]
Length = 456
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 169/294 (57%), Positives = 220/294 (74%), Gaps = 8/294 (2%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR--IYHANLKKGSGAEPKTAAAVDN 317
+LP P EI + LDK VIGQ KKVLSVAVYNHYKR + N+ E + +
Sbjct: 77 ELPKPVEIKQYLDKHVIGQNNTKKVLSVAVYNHYKRLSVDAGNMSNQDFDETQGYS---- 132
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+ VEL+KSN+LLMGPTG GKTLLA++LA+ ++VPF +ADATTLT+AGYVG+DVE+IL +
Sbjct: 133 DEQVELQKSNILLMGPTGCGKTLLAESLAKLLDVPFAVADATTLTEAGYVGDDVENILLR 192
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL A+F++EAAQQG++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+VNVP
Sbjct: 193 LLQVADFDIEAAQQGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKILEGTVVNVPP 252
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP-VRANMRAGVTD 496
+G RKHP D IQ+DT ILFICGGAFV L+K + +R S+GF P V+ T
Sbjct: 253 QGGRKHPYQDFIQIDTSKILFICGGAFVGLDKLVEQRMGKKSLGFIQPGVKPGEEVQKTS 312
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T+ +L++VE DL+ +GLIPEF+GR P+L ++ L E+ LVK+LTEP NAL
Sbjct: 313 VD-TTEILQNVEPQDLVKFGLIPEFIGRVPVLTVISPLDEEALVKILTEPHNAL 365
>gi|406035384|ref|ZP_11042748.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
parvus DSM 16617 = CIP 108168]
Length = 436
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 162/290 (55%), Positives = 217/290 (74%), Gaps = 18/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ K + +
Sbjct: 60 LPKPHEIRAALDQYVIGQDIAKKTLSVAVYNHYKRL-------------KVGQSHHKHQD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ D
Sbjct: 227 RKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTADVKNK-----DDRKKI 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 282 SELFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNAL 331
>gi|402699100|ref|ZP_10847079.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas fragi
A22]
Length = 427
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 169/290 (58%), Positives = 218/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK + R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVVQARSTRGGIGFSAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|222085565|ref|YP_002544095.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
radiobacter K84]
gi|221723013|gb|ACM26169.1| ATP-dependent Clp protease [Agrobacterium radiobacter K84]
Length = 470
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 221/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G +
Sbjct: 111 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------D 154
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 155 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 214
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 215 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 274
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+ D
Sbjct: 275 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGAAVKG------PDDRRV 328
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 329 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 378
>gi|296112318|ref|YP_003626256.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Moraxella
catarrhalis RH4]
gi|295920012|gb|ADG60363.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Moraxella
catarrhalis BBH18]
Length = 438
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 165/294 (56%), Positives = 219/294 (74%), Gaps = 19/294 (6%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
L + LP PKE+ LD +VIGQ+ AKK L+VAVYNHYKR+ AN KK +
Sbjct: 82 LNKVLPKPKELRAHLDDYVIGQDVAKKALAVAVYNHYKRLKVANDKKDT----------- 130
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
D VEL KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 131 --DGVELSKSNILLIGPTGSGKTLLAQTLAKMLDVPFAMADATTLTEAGYVGEDVENIVQ 188
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL A+++V+ A++G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ N+P
Sbjct: 189 KLLQAADYDVQKAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVANIP 248
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHPR + IQ+DT +IL I GGAF L+K I +R + + IGF A V+A + +T+
Sbjct: 249 PQGGRKHPRQEMIQVDTSNILMIVGGAFAGLDKVIRQRTEKTGIGFHADVKAQDESSITE 308
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE+ DLI +GLIPE +GR P+L SL L E LV++LTEPKNAL
Sbjct: 309 ------LFREVEAEDLIKFGLIPELIGRLPVLASLEELDEAALVQILTEPKNAL 356
>gi|357974123|ref|ZP_09138094.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
KC8]
Length = 422
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 169/290 (58%), Positives = 216/290 (74%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P+EICK LD +VIGQ +AK+VLSVAV+NHYKR+ H GAE
Sbjct: 64 VPSPQEICKVLDDYVIGQMQAKRVLSVAVHNHYKRLAHG----AKGAE------------ 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLA+ +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLVGPTGCGKTLLAQTLAKTFDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 168 ASDYNVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I +R Q SIGFGA V A D T
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFSGLEKIIGDRLQGKSIGFGAHVAA------PDERRT 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L E DL+ +GLIPEFVGR P++ +L L E LVK+L+EPKNAL
Sbjct: 282 GEVLRQCEPEDLLKFGLIPEFVGRLPVIATLEDLDEPALVKILSEPKNAL 331
>gi|294651551|ref|ZP_06728860.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter
haemolyticus ATCC 19194]
gi|292822574|gb|EFF81468.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter
haemolyticus ATCC 19194]
Length = 436
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 163/290 (56%), Positives = 217/290 (74%), Gaps = 18/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G
Sbjct: 60 LPKPHEIRAALDQYVIGQDIAKKTLSVAVYNHYKR-----LKAGQSGH--------THKE 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ D+
Sbjct: 227 RKHPQQEFIQIDTANILFICGGAFSGLEKIVQQRQEKGGIGFTADVKNK-----DDSKKV 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 282 SELFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNAL 331
>gi|406837289|ref|ZP_11096883.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus vini
DSM 20605]
Length = 415
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 167/299 (55%), Positives = 219/299 (73%), Gaps = 25/299 (8%)
Query: 255 SNLGEDL---PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKT 311
+ L EDL P P EI L+++VIGQE+AKK L+VAVYNHYKRI
Sbjct: 52 AELSEDLINVPKPHEIVNILNQYVIGQEQAKKTLAVAVYNHYKRI--------------- 96
Query: 312 AAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDV 371
++ ++ DD EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDV
Sbjct: 97 SSELNQDDETELQKSNICLVGPTGSGKTFLAQSLAKILNVPFAIADATTLTEAGYVGEDV 156
Query: 372 ESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
E+IL KLL A+++VE AQ+G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGT
Sbjct: 157 ENILLKLLQNADYDVERAQRGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGT 216
Query: 432 IVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR 491
I NVP +G RKHP+ + IQ+DT +ILFI GGAF +E+ + R D +IGFGA +
Sbjct: 217 IANVPPQGGRKHPQQEFIQLDTTNILFIVGGAFDGIEEIVKRRLGDQTIGFGATAENKLD 276
Query: 492 AGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ SL++ + DL+ +GLIPEF+GR PIL +L LTE LV++LTEPKNAL
Sbjct: 277 E-------SKSLMQQIIPEDLLKFGLIPEFIGRLPILTALEKLTEGDLVRILTEPKNAL 328
>gi|152995750|ref|YP_001340585.1| ATP-dependent protease ATP-binding subunit ClpX [Marinomonas sp.
MWYL1]
gi|226706592|sp|A6VW21.1|CLPX_MARMS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|150836674|gb|ABR70650.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Marinomonas
sp. MWYL1]
Length = 426
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 163/292 (55%), Positives = 223/292 (76%), Gaps = 20/292 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LPTP ++ LD +VIGQ+KAK+VL+VAVYNHYKR+ H + KT D
Sbjct: 66 DELPTPAKLSAALDDYVIGQDKAKRVLAVAVYNHYKRLRH---------QGKT------D 110
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 111 TSIELGKSNILLIGPTGSGKTLLAQTLARVLDVPFTIADATTLTEAGYVGEDVENIIQKL 170
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 171 LQNCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 230
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF LE+ IS+R + SSIGF A V++ A
Sbjct: 231 GGRKHPQQEFLQVDTSNILFICGGAFAGLERVISDRTEKSSIGFSATVKSKEEGRSFSEA 290
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
V VE+ DL+ +GLIPEFVGR P++ +L+ L E+ L+ +L++PKNAL
Sbjct: 291 V-----HRVETEDLVKFGLIPEFVGRLPVVATLSELDEEALMTILSQPKNAL 337
>gi|384915525|ref|ZP_10015741.1| ATP-dependent Clp protease ATP-binding subunit [Methylacidiphilum
fumariolicum SolV]
gi|384527075|emb|CCG91612.1| ATP-dependent Clp protease ATP-binding subunit [Methylacidiphilum
fumariolicum SolV]
Length = 412
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 223/290 (76%), Gaps = 16/290 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P EI L+ +VIGQ AKK+LSVAV+NHYKRI+ L S +++ +
Sbjct: 52 IPKPTEIFARLEDYVIGQTNAKKILSVAVHNHYKRIFSGELTDLS--------SLNQIKD 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+EK+N+LL+GPTGSGKTLLAKT AR ++VPF IADAT+LT+AGYVGEDVESIL +LL
Sbjct: 104 VEIEKTNILLVGPTGSGKTLLAKTFARLLDVPFCIADATSLTEAGYVGEDVESILLRLLQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A F+V+ A+ G+VYIDE+DKI++K++S +I+RDVSGEGVQQALLKMLEGTI NVP +G
Sbjct: 164 NANFDVKKAEMGIVYIDEIDKISRKSDSPSITRDVSGEGVQQALLKMLEGTICNVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I+++T++ILFICGGAF+ L+K ++ RR +GF ++ T+ + +
Sbjct: 224 RKHPHQEFIRINTENILFICGGAFIGLDKIVARRRGKQVLGFQHALQ-------TEDSQS 276
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ LE VE DLI+YG+IPEFVGRFP++ +L+ LTED+LV++LTEPKNA+
Sbjct: 277 NGQLE-VEPEDLISYGMIPEFVGRFPVIATLSELTEDELVRILTEPKNAI 325
>gi|332141944|ref|YP_004427682.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Deep ecotype']
gi|410862349|ref|YP_006977583.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii AltDE1]
gi|327551966|gb|AEA98684.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Deep ecotype']
gi|410819611|gb|AFV86228.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii AltDE1]
Length = 424
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD +VIGQE AKKVLSVAVYNHYKR+ + ++ +G
Sbjct: 65 LPKPTEIHAHLDDYVIGQEHAKKVLSVAVYNHYKRLRNGDVHEG---------------- 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R Q D+ IGFGA V++ ++
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAQKDTGIGFGATVKSK-----DNSKQ 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L + VE DL+ YGLIPEF+GR P++ SL L ED L+++L EPKNA+
Sbjct: 284 ISELFKQVEPEDLVKYGLIPEFIGRLPVVTSLEELNEDALIQILREPKNAI 334
>gi|256823169|ref|YP_003147132.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Kangiella
koreensis DSM 16069]
gi|256796708|gb|ACV27364.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Kangiella
koreensis DSM 16069]
Length = 422
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 222/290 (76%), Gaps = 18/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + L+++VIGQ++AKKVLSVAVYNHYKR+ +EP ++ D
Sbjct: 62 LPKPQEIAEFLEQYVIGQDRAKKVLSVAVYNHYKRL---------ESEPASSEHKD---- 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR + VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARMLEVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILF+CGGAF LEK I ER + IGFGA V+ V +
Sbjct: 229 RKHPQQEFLQVDTGNILFVCGGAFAGLEKIIQERTEKGGIGFGADVKQ-----VKEGRAI 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L++VE DL+ +GLIPEF+GR PI+ +L L E+ LV++L EPKNAL
Sbjct: 284 GEMLKAVEPDDLVKFGLIPEFIGRLPIVTTLQELDEEALVRILIEPKNAL 333
>gi|13476995|ref|NP_108565.1| ATP-dependent protease ATP-binding protein ClpX [Mesorhizobium loti
MAFF303099]
gi|21263478|sp|Q982V5.1|CLPX_RHILO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|14027758|dbj|BAB54351.1| ATP-dependent Clp protease ATP binding subunit; ClpX [Mesorhizobium
loti MAFF303099]
Length = 424
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 166/292 (56%), Positives = 220/292 (75%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI K LD +VIGQ AK+VLSVAV+NHYKR+ HA +
Sbjct: 63 EGVPTPQEILKVLDDYVIGQPYAKRVLSVAVHNHYKRLAHAG----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 NDVELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGFGA V + +
Sbjct: 227 GGRKHPQQEFLQVDTANILFICGGAFAGLDKIISDRGRKTSIGFGATVAS------PEDR 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T + VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 281 RTGDIFRQVEPEDLLKFGLIPEFVGRLPVLATLEDLDEPALIQILTEPKNAL 332
>gi|254556941|ref|YP_003063358.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
plantarum JDM1]
gi|300768256|ref|ZP_07078161.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308180930|ref|YP_003925058.1| ATP-dependent protease ATP-binding subunit [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|380032875|ref|YP_004889866.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
plantarum WCFS1]
gi|418275671|ref|ZP_12890994.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Lactobacillus
plantarum subsp. plantarum NC8]
gi|448821642|ref|YP_007414804.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
plantarum ZJ316]
gi|38257506|sp|Q88VE2.1|CLPX_LACPL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254045868|gb|ACT62661.1| ATP-dependent protease ATP-binding subunit [Lactobacillus plantarum
JDM1]
gi|300494320|gb|EFK29483.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308046421|gb|ADN98964.1| ATP-dependent protease ATP-binding subunit [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|342242118|emb|CCC79352.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Lactobacillus
plantarum WCFS1]
gi|376009222|gb|EHS82551.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Lactobacillus
plantarum subsp. plantarum NC8]
gi|448275139|gb|AGE39658.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
plantarum ZJ316]
Length = 421
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 169/295 (57%), Positives = 218/295 (73%), Gaps = 23/295 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+PTPKEI LD++VIGQ +AK+ LSVAVYNHYKR+ A DND+
Sbjct: 60 DIPTPKEIVDELDQYVIGQNEAKRTLSVAVYNHYKRV---------------KAMADNDE 104
Query: 320 NVE----LEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESIL 375
E L+KSN+ L+GPTGSGKT LA++LAR ++VPF IADATTLT+AGYVGEDVE+IL
Sbjct: 105 ETEDGPELQKSNISLVGPTGSGKTFLAQSLARILDVPFAIADATTLTEAGYVGEDVENIL 164
Query: 376 YKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV 435
KLL A+++VE A++G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI NV
Sbjct: 165 LKLLQNADYDVERAEKGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANV 224
Query: 436 PEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVT 495
P +G RKHP+ + IQ+DT +ILFI GGAF +E + R D +IGFG + + V
Sbjct: 225 PPQGGRKHPQQEFIQIDTTNILFIVGGAFDGIEDIVKRRLGDKTIGFGTD--TDGKNAVL 282
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
D + SL++ V DL+ +GLIPEF+GR PIL +L LTED LV++LTEPKNAL
Sbjct: 283 DD--SKSLMQQVVPEDLLQFGLIPEFIGRLPILTALERLTEDDLVRILTEPKNAL 335
>gi|148553516|ref|YP_001261098.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas
wittichii RW1]
gi|166215208|sp|A5V3U4.1|CLPX_SPHWW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|148498706|gb|ABQ66960.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sphingomonas
wittichii RW1]
Length = 424
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 219/292 (75%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP EIC+ LD++VIGQ KAK+VLSVAV+NHYKR+ H KG+ +
Sbjct: 64 VPTPHEICEHLDQYVIGQAKAKRVLSVAVHNHYKRLNHG--AKGA--------------D 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+T+AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLVGPTGSGKTLLAQTMARLLDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 168 ASDYNVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK I +R Q SIGFGA V A R G T
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIGDRLQGKSIGFGAYVAAPEERRTGET--- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L+ E DL+ +GLIPEFVGR P++ +L L E LV++LT PKNAL
Sbjct: 285 -----LQQCEPEDLLKFGLIPEFVGRLPVIATLMDLDEAALVEILTAPKNAL 331
>gi|349699183|ref|ZP_08900812.1| Clp protease ATP-binding subunit [Gluconacetobacter europaeus LMG
18494]
Length = 419
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 163/290 (56%), Positives = 221/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ AKKVLSVAV+NHYKR+ HA +++
Sbjct: 62 VPTPREICKILDDYVIGQGHAKKVLSVAVHNHYKRLAHAQ----------------KNND 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 AADYNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ++LFICGGAF L+K IS R + S IGFGA V++ D
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVQS------PDERRM 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++L VE DL+ +GLIPEF+GR P++ +L L E L+++LT+PKNAL
Sbjct: 280 GAVLRDVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNAL 329
>gi|429216066|ref|ZP_19207225.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
M1]
gi|428153719|gb|EKX00273.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
M1]
Length = 426
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 215/291 (73%), Gaps = 23/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKK L+VAVYNHYKR+ D D+
Sbjct: 65 LPAPKEIRSILDQYVIGQERAKKTLAVAVYNHYKRLNQR----------------DRKDD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN-MRAGVTDAAV 499
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ M V +A
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFAGLEKVIQNRSTKGGIGFSAEVRSQEMGKKVGEA-- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE DL+ +GLIPEFVGR PI+ +L L E L+++LTEPKNAL
Sbjct: 287 ----LREVEPEDLVKFGLIPEFVGRLPIIATLDELDEAALMQILTEPKNAL 333
>gi|288941152|ref|YP_003443392.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Allochromatium
vinosum DSM 180]
gi|288896524|gb|ADC62360.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Allochromatium vinosum DSM 180]
Length = 419
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 217/290 (74%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI LD+FVIGQEKAKKVLSVAVYNHYKR+ A K ++
Sbjct: 60 LPKPREINAKLDEFVIGQEKAKKVLSVAVYNHYKRLEVAEAK----------------ED 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 104 IEIAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 164 KCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFI GGAF L+K I R + + IGF A V++ D+
Sbjct: 224 RKHPQQEFLQVDTSNILFIVGGAFAGLDKVIQNRSKKTGIGFSAEVQSK-----DDSRQI 278
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S LL +VE DLI YGLIPEFVGR P++ +L L E L+ +LTEPK+AL
Sbjct: 279 SELLSAVEPEDLIRYGLIPEFVGRLPVMATLEELDEAALMLILTEPKHAL 328
>gi|425744506|ref|ZP_18862562.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-323]
gi|425490661|gb|EKU56957.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-323]
Length = 436
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 161/290 (55%), Positives = 218/290 (75%), Gaps = 18/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ K + +
Sbjct: 60 LPKPHEIRAALDQYVIGQDVAKKTLSVAVYNHYKRL-------------KVGQSNHGHQD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ D+
Sbjct: 227 RKHPQQEFIQIDTANILFICGGAFSGLEKIVQQRQEKGGIGFTADVKNK-----DDSKKV 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 282 SELFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNAL 331
>gi|157374681|ref|YP_001473281.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella
sediminis HAW-EB3]
gi|189044153|sp|A8FTI0.1|CLPX_SHESH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|157317055|gb|ABV36153.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
sediminis HAW-EB3]
Length = 425
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+E+ LD +VIGQ+KAKKVLSVAVYNHYKR+ +A PK D
Sbjct: 65 LPTPRELRAHLDDYVIGQDKAKKVLSVAVYNHYKRLKNAG--------PK--------DG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILF+CGGAF LEK I +R + IGFGA V+ G D A
Sbjct: 229 RKHPQQEFLQVDTSKILFVCGGAFSGLEKVIEQRSHTGTGIGFGAEVK-----GEDDKAS 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L VE DL+ YGLIPEF+GR P+L +L L + L+++L+EPKNA+
Sbjct: 284 ISDILMQVEPEDLVKYGLIPEFIGRLPVLATLAELDDAALIQILSEPKNAI 334
>gi|398378315|ref|ZP_10536479.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. AP16]
gi|397725069|gb|EJK85525.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. AP16]
Length = 425
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 165/292 (56%), Positives = 223/292 (76%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G +
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------D 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+ + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGAAVKGPDDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 333
>gi|237653229|ref|YP_002889543.1| ATP-dependent protease ATP-binding subunit ClpX [Thauera sp. MZ1T]
gi|237624476|gb|ACR01166.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thauera sp.
MZ1T]
Length = 422
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 162/290 (55%), Positives = 215/290 (74%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EIC LD++VIGQ AK+ L+VAVYNHYKR+ H + ++ D+
Sbjct: 64 LPTPHEICSILDQYVIGQSLAKRSLAVAVYNHYKRLRHLDARQ---------------DD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELAKSNILLIGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVGEDVENIVQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG++YIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ ++P +G
Sbjct: 169 KCDYDVDKAQQGIIYIDEIDKISRKADNPSITRDVSGEGVQQALLKLVEGTVASIPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT ++LFICGGAF LEK I R + IGFGA V++ +TD
Sbjct: 229 RKHPNQDFIQVDTTNVLFICGGAFDGLEKVIRNRTEKVGIGFGAEVKSKEGKNLTDT--- 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
VE DLI +GLIPE +GR P++ +L L E L+++L EPKNAL
Sbjct: 286 ---FRQVEPEDLIKFGLIPELIGRLPVVATLQELDEAALIQILIEPKNAL 332
>gi|145589118|ref|YP_001155715.1| ATP-dependent protease ATP-binding subunit ClpX [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|226706594|sp|A4SXD7.1|CLPX_POLSQ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|145047524|gb|ABP34151.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 453
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 172/304 (56%), Positives = 219/304 (72%), Gaps = 18/304 (5%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP--KTAAAVD 316
E LPTP EI LD++VIGQE AKK L+VAVYNHYKR+ + K + K A D
Sbjct: 63 ESLPTPHEIRGNLDQYVIGQEHAKKTLAVAVYNHYKRLQYLPKPKKEKLDKDGKPVEASD 122
Query: 317 ND----------DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
D VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGY
Sbjct: 123 KKESKLPAKAIVDGVELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGY 182
Query: 367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
VGEDVE+I+ KLL ++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK
Sbjct: 183 VGEDVENIIQKLLQACDYNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLK 242
Query: 427 MLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV 486
++EGT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I +R + IGF A V
Sbjct: 243 LVEGTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKVIQQRTAKTGIGFNATV 302
Query: 487 RANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEP 546
GV+D LL VE DLI +GLIPE +GR P++ +L L E+ L+++LTEP
Sbjct: 303 PGKDERGVSD------LLIEVEPEDLIKFGLIPELIGRLPVVATLAQLDEEALIQILTEP 356
Query: 547 KNAL 550
KNAL
Sbjct: 357 KNAL 360
>gi|109899440|ref|YP_662695.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoalteromonas
atlantica T6c]
gi|123170858|sp|Q15R47.1|CLPX_PSEA6 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|109701721|gb|ABG41641.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas atlantica T6c]
Length = 425
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 168/293 (57%), Positives = 221/293 (75%), Gaps = 22/293 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LPTPKEI LD +VIGQE AKKVLSVAVYNHYKR L+ G D
Sbjct: 63 DELPTPKEIHSHLDDYVIGQEHAKKVLSVAVYNHYKR-----LRNG-----------DVH 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LLMGPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGVELGKSNILLMGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFG ++ + ++
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAHTGTGIGFGTAIKDS-----SNK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ LL+ VE DL+ YGLIPEF+GR P+L SL L+E+ L+++L EPKN+L
Sbjct: 282 SKEGELLKKVEPEDLVKYGLIPEFIGRLPVLTSLEELSEEALIQILREPKNSL 334
>gi|410627459|ref|ZP_11338198.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
mesophila KMM 241]
gi|410152951|dbj|GAC24967.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
mesophila KMM 241]
Length = 425
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 220/293 (75%), Gaps = 22/293 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LPTPKEI LD +VIGQE AKKVLSVAVYNHYKR+ + D
Sbjct: 63 DELPTPKEIHSHLDDYVIGQEHAKKVLSVAVYNHYKRLRNG----------------DVH 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LLMGPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGVELGKSNILLMGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFG ++ + ++
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAHTGTGIGFGTAIKDS-----SNK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ LL+ VE DL+ YGLIPEF+GR P+L SL L+E+ L+++L EPKN+L
Sbjct: 282 SKEGELLKKVEPEDLVKYGLIPEFIGRLPVLTSLEELSEEALIQILREPKNSL 334
>gi|389774766|ref|ZP_10192885.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
spathiphylli B39]
gi|388438365|gb|EIL95120.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
spathiphylli B39]
Length = 430
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 216/290 (74%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++V+GQ +AKK L+VAVYNHYKRI D+
Sbjct: 66 LPKPREIRESLDQYVVGQSRAKKALAVAVYNHYKRIESRQ----------------KSDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQSGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTLASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R + + IGF A VR+ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFSGLDKVIQQRSETTGIGFSAEVRSKER-----TENL 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE +DL+ +GLIPEFVGR P++ +L L E LVK+LTEPKNA+
Sbjct: 285 GKVLAEVEPADLVRFGLIPEFVGRLPVVATLDELDEAALVKILTEPKNAV 334
>gi|430810195|ref|ZP_19437310.1| ATP-dependent protease ATP-binding subunit ClpX [Cupriavidus sp.
HMR-1]
gi|429497429|gb|EKZ95962.1| ATP-dependent protease ATP-binding subunit ClpX [Cupriavidus sp.
HMR-1]
Length = 425
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 214/291 (73%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI + LD++VIGQ++AKK+L+VAVYNHYKR+ H K D
Sbjct: 66 DLPTPHEIRESLDQYVIGQDQAKKILAVAVYNHYKRLKHLGKK----------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I +R + IGF A V++ V
Sbjct: 230 GRKHPNQDFLQVDTTNILFICGGAFDGLEKVIMQRSDKTGIGFAAQVQSKEEREV----- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L E DLI +GLIPE +GR P++ +L L E L+++L EPKNAL
Sbjct: 285 -SEVLPQTEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMQILIEPKNAL 334
>gi|296116538|ref|ZP_06835148.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconacetobacter
hansenii ATCC 23769]
gi|295976750|gb|EFG83518.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconacetobacter
hansenii ATCC 23769]
Length = 419
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 162/290 (55%), Positives = 221/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ AKKVLSVAV+NHYKR+ H+ +++
Sbjct: 62 VPTPREICNILDDYVIGQMHAKKVLSVAVHNHYKRLAHSQ----------------KNND 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 AADYNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ++LFICGGAF L+K IS R + S IGFGA V++ D T
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVQS------PDDRRT 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++L +E DL+ +GLIPEF+GR P+L +L L E L+++LT+PKNAL
Sbjct: 280 GAILRDIEPEDLLKFGLIPEFIGRLPVLATLEDLDEAALIEILTKPKNAL 329
>gi|424795847|ref|ZP_18221655.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
translucens pv. graminis ART-Xtg29]
gi|433679139|ref|ZP_20510915.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
translucens pv. translucens DSM 18974]
gi|440731336|ref|ZP_20911361.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
translucens DAR61454]
gi|422795261|gb|EKU23984.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
translucens pv. graminis ART-Xtg29]
gi|430815743|emb|CCP41465.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
translucens pv. translucens DSM 18974]
gi|440373298|gb|ELQ10057.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
translucens DAR61454]
Length = 428
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 217/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI + LD++VIGQ +AK+ L+VAVYNHYKRI +D
Sbjct: 66 LPKPKEILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRQ----------------KNDE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVDKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R D IGFGA V+++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDVGGIGFGAKVKSSER-----KRE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPEFVGR P++ +L L E L+++LTEPKNA+
Sbjct: 285 VGKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIRILTEPKNAI 335
>gi|154497946|ref|ZP_02036324.1| hypothetical protein BACCAP_01926 [Bacteroides capillosus ATCC
29799]
gi|150272936|gb|EDN00093.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Pseudoflavonifractor capillosus ATCC 29799]
Length = 438
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 163/290 (56%), Positives = 221/290 (76%), Gaps = 23/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI + LD+++IGQE AK LSVAVYNHYKRIY G G ++
Sbjct: 63 IPTPREIREVLDQYIIGQEDAKVALSVAVYNHYKRIYF-----GGG------------ED 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+LL+GPTGSGKTL A+TLAR + VPF IADATTLT+AGYVG+DVE+IL +L+
Sbjct: 106 VELQKSNILLVGPTGSGKTLFAQTLARILKVPFAIADATTLTEAGYVGDDVENILLRLVQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+F++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 166 AADFDIELAERGIIYIDEMDKIARKSENTSITRDVSGEGVQQALLKILEGTVANVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++TK+ILFICGGAF LEK I +R+ ++GFGA +++
Sbjct: 226 RKHPHQEFIQLNTKNILFICGGAFDGLEKIIEQRQDRKTMGFGAEIKSKKELD------R 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S++L+ V+ DLI +G+IPE VGR P++ +L AL ++QLV++LTEPKNAL
Sbjct: 280 SAVLKDVQPHDLIKFGIIPELVGRLPVVTTLRALNKEQLVQILTEPKNAL 329
>gi|170744619|ref|YP_001773274.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
sp. 4-46]
gi|238688059|sp|B0UD19.1|CLPX_METS4 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|168198893|gb|ACA20840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium sp. 4-46]
Length = 423
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 220/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA A ND
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHA--------------AKHND-- 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISARGKGTSIGFGATVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +VE DL+ +GLIPEFVGR P+L +L L E L ++L EPKNAL
Sbjct: 281 GEIFRAVEPEDLLKFGLIPEFVGRLPVLATLEDLDETALKRILQEPKNAL 330
>gi|330994050|ref|ZP_08317980.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Gluconacetobacter sp. SXCC-1]
gi|329758996|gb|EGG75510.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Gluconacetobacter sp. SXCC-1]
Length = 419
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 164/292 (56%), Positives = 222/292 (76%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ AKKVLSVAV+NHYKR+ HA +++
Sbjct: 62 VPTPREICKILDDYVIGQAHAKKVLSVAVHNHYKRLAHAQ----------------KNND 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNIMLLGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 AADYNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT ++LFICGGAF L+K IS R + S IGFGA V++ R G
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVQSPEERRMG----- 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++L VE DL+ +GLIPEF+GR P++ +L L E L+++LT+PKNAL
Sbjct: 281 ---AVLRDVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNAL 329
>gi|212709198|ref|ZP_03317326.1| hypothetical protein PROVALCAL_00231 [Providencia alcalifaciens DSM
30120]
gi|422019640|ref|ZP_16366183.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
alcalifaciens Dmel2]
gi|212688110|gb|EEB47638.1| hypothetical protein PROVALCAL_00231 [Providencia alcalifaciens DSM
30120]
gi|414102746|gb|EKT64336.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
alcalifaciens Dmel2]
Length = 425
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 222/292 (76%), Gaps = 21/292 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI + LD +VIGQEKAKKVL+VAVYNHYKR+ + + KT+ D
Sbjct: 63 ELPTPHEIRQHLDDYVIGQEKAKKVLAVAVYNHYKRLRNGD---------KTS------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 GVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 QKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAA 498
RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGF A V+ G ++ A
Sbjct: 228 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTRSGIGFAAQVK-----GESEKA 282
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL E DLI +GLIPEF+GR P++ +LT L+E+ L+++L EPKNAL
Sbjct: 283 TEGELLTQAEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILKEPKNAL 334
>gi|420238691|ref|ZP_14743074.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF080]
gi|398085331|gb|EJL75991.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF080]
Length = 425
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 164/292 (56%), Positives = 225/292 (77%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ++AK++LSVAV+NHYKR+ HA+ KG +
Sbjct: 66 VPTPQDIIKVLDEYVIGQKQAKRILSVAVHNHYKRLAHAS--KGG--------------D 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V++ + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGASVKSAEDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 333
>gi|416228845|ref|ZP_11627777.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 46P47B1]
gi|326563260|gb|EGE13527.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 46P47B1]
Length = 438
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 164/294 (55%), Positives = 219/294 (74%), Gaps = 19/294 (6%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
L + LP PKE+ LD +VIGQ+ AKK L+VAVYNHYKR+ AN KK +
Sbjct: 82 LNKVLPKPKELRAHLDDYVIGQDVAKKALAVAVYNHYKRLKVANDKKDT----------- 130
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
D VEL KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 131 --DGVELSKSNILLIGPTGSGKTLLAQTLAKMLDVPFAMADATTLTEAGYVGEDVENIVQ 188
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL ++++V+ A+QG++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ N+P
Sbjct: 189 KLLQASDYDVQKAEQGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVANIP 248
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHPR + IQ+DT +IL I GGAF L+K I +R + + IGF A V+A + +T+
Sbjct: 249 PQGGRKHPRQEMIQVDTSNILMIVGGAFAGLDKVIRQRTEKTGIGFHADVKAQDESSITE 308
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE+ DLI +GLIPE +GR P++ SL L E LV++LTEPKNAL
Sbjct: 309 ------LFREVEAEDLIKFGLIPELIGRLPVIASLEELDEAALVQILTEPKNAL 356
>gi|387771175|ref|ZP_10127341.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pasteurella
bettyae CCUG 2042]
gi|386902380|gb|EIJ67220.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pasteurella
bettyae CCUG 2042]
Length = 411
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 219/293 (74%), Gaps = 22/293 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP EI LD +VIGQE AKKVLSVAVYNHYKR+ +N G G
Sbjct: 59 EKLPTPHEIRAHLDDYVIGQEYAKKVLSVAVYNHYKRLRSSN---GIG------------ 103
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTGSGKTLLA+T+AR +NVPF +ADATTLT+AGYVGEDVE+++ KL
Sbjct: 104 -DVELGKSNILLIGPTGSGKTLLAETMARMLNVPFAMADATTLTEAGYVGEDVENVIQKL 162
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L E+N E AQQG++YIDE+DKIT+K+++ +I+RDVSGEGVQQALLK++EGT+ ++P +
Sbjct: 163 LQNCEYNTEKAQQGIIYIDEIDKITRKSDNPSITRDVSGEGVQQALLKLIEGTVASIPPQ 222
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +++DT ILFICGGAF L++ + +R + S IGF A V+ G D
Sbjct: 223 GGRKHPQQEMLRVDTSKILFICGGAFAGLDRVVQKRIYKGSGIGFDAEVK-----GEADE 277
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A + L + +E+ DLI YGLIPEF+GR P++ L+ L E+ L+++LTEPKNAL
Sbjct: 278 ASLTDLFKQIETEDLIKYGLIPEFIGRLPVVAPLSELDENALIQILTEPKNAL 330
>gi|209525223|ref|ZP_03273766.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Arthrospira
maxima CS-328]
gi|376002437|ref|ZP_09780270.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Arthrospira sp. PCC 8005]
gi|209494408|gb|EDZ94720.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Arthrospira
maxima CS-328]
gi|375329177|emb|CCE16023.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Arthrospira sp. PCC 8005]
Length = 456
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 169/294 (57%), Positives = 220/294 (74%), Gaps = 8/294 (2%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR--IYHANLKKGSGAEPKTAAAVDN 317
+LP P EI + LDK VIGQ KKVLSVAVYNHYKR + N+ E + +
Sbjct: 77 ELPKPVEIKQYLDKHVIGQNNTKKVLSVAVYNHYKRLSVDAGNISNQDFDETQGYS---- 132
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+ VEL+KSN+LLMGPTG GKTLLA++LA+ ++VPF +ADATTLT+AGYVG+DVE+IL +
Sbjct: 133 DEQVELQKSNILLMGPTGCGKTLLAESLAKLLDVPFAVADATTLTEAGYVGDDVENILLR 192
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL A+F++EAAQQG++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+VNVP
Sbjct: 193 LLQVADFDIEAAQQGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKILEGTVVNVPP 252
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP-VRANMRAGVTD 496
+G RKHP D IQ+DT ILFICGGAFV L+K + +R S+GF P V+ T
Sbjct: 253 QGGRKHPYQDFIQIDTSKILFICGGAFVGLDKLVEQRMGKKSLGFIQPGVKPGEEVQKTS 312
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T+ +L++VE DL+ +GLIPEF+GR P+L ++ L E+ LVK+LTEP NAL
Sbjct: 313 VD-TTEILQNVEPQDLVKFGLIPEFIGRVPVLTVISPLDEEALVKILTEPHNAL 365
>gi|387886909|ref|YP_006317208.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
noatunensis subsp. orientalis str. Toba 04]
gi|386871725|gb|AFJ43732.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
noatunensis subsp. orientalis str. Toba 04]
Length = 416
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 208/292 (71%), Gaps = 21/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E L P EI K LD ++IGQ+ AKKVLSVAVYNHYKRI K
Sbjct: 54 EKLSKPIEIKKYLDNYIIGQDNAKKVLSVAVYNHYKRITSNTTK---------------- 97
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+ EL+KSNVLL+GPTGSGKTL A+TLA+ +NVPF IADATTLT+AGYVG+DVE+++ +L
Sbjct: 98 DDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPFAIADATTLTEAGYVGDDVENVIVRL 157
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+F+V AQ+G++YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGT+ +VP K
Sbjct: 158 LQNADFDVAKAQKGIIYIDEIDKIARKSESASITRDVSGEGVQQALLKLIEGTVSSVPPK 217
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT DILFICGGAF +EK + R SIGF A V ++
Sbjct: 218 GGRKHPNQDMIQVDTSDILFICGGAFAGIEKVVKHRMDKVSIGFNADVIQQ-----KNSL 272
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T L+ VES DL +GLIPE +GR PI+ L L E+ LVK+LTEPKNAL
Sbjct: 273 NTEKLMRKVESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVKILTEPKNAL 324
>gi|255321157|ref|ZP_05362323.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens SK82]
gi|421855045|ref|ZP_16287427.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
gi|255301711|gb|EET80962.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens SK82]
gi|403189545|dbj|GAB73628.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
Length = 438
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 163/290 (56%), Positives = 219/290 (75%), Gaps = 17/290 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ K S KT +D
Sbjct: 60 LPKPHEIRAALDQYVIGQDIAKKTLSVAVYNHYKRL------KVSQNGQKT------EDK 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A++++E AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 168 KADYDIEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT ++LFICGGAF LEK + R++ IGF A V++ +
Sbjct: 228 RKHPQQEFIQVDTSNVLFICGGAFSGLEKIVQHRQEKGGIGFTAEVKSK-----DETKKL 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE +DL+ +GLIPEF+GR P++ +L L ED L+++LTEPKNAL
Sbjct: 283 AELFRQVEPADLVKFGLIPEFIGRLPVIATLEELDEDALMQILTEPKNAL 332
>gi|88810608|ref|ZP_01125865.1| ATP-dependent protease ATP-binding subunit [Nitrococcus mobilis
Nb-231]
gi|88792238|gb|EAR23348.1| ATP-dependent protease ATP-binding subunit [Nitrococcus mobilis
Nb-231]
Length = 425
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 169/294 (57%), Positives = 217/294 (73%), Gaps = 23/294 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G LP P EI LD +VIGQE+AKKVLSVAVYNHYKR+ ++ K
Sbjct: 63 GSKLPKPHEIKTVLDDYVIGQEQAKKVLSVAVYNHYKRMEASHSKS-------------- 108
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 109 --EVELSKSNILLIGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQK 166
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQQG+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGTI +VP
Sbjct: 167 LLQKCDYDVEKAQQGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTIASVPP 226
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA-NMRAGVTD 496
+G RKHP+ + +Q++T +ILFICGGAF LEK I +R + IGF A ++ R + D
Sbjct: 227 QGGRKHPQQEFLQVNTGNILFICGGAFAGLEKIIQQRSERGGIGFSAEIKGREQRKSIGD 286
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE DLI YGLIPEFVGR P++ +LT L E+ L+++L EPKNAL
Sbjct: 287 S------LRDVEPEDLIRYGLIPEFVGRMPVVATLTELDEEALMRILIEPKNAL 334
>gi|417120998|ref|ZP_11970452.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0246]
gi|386148728|gb|EIG95163.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0246]
Length = 424
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + DN +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DNSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|285017389|ref|YP_003375100.1| ATP-dependent clp protease ATP-binding subunit protein [Xanthomonas
albilineans GPE PC73]
gi|283472607|emb|CBA15112.1| probable atp-dependent clp protease atp-binding subunit protein
[Xanthomonas albilineans GPE PC73]
Length = 428
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ++AK+ L+VAVYNHYKRI + +D
Sbjct: 66 LPKPREILEVLDQYVIGQQRAKRTLAVAVYNHYKRI----------------ESRQKNDE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVDKAQHGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R D+ IGFGA V++ V
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKS-----VERKRE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+
Sbjct: 285 VGKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAI 335
>gi|332140446|ref|YP_004426184.1| ATP-dependent protease ATP-binding subunit [Alteromonas macleodii
str. 'Deep ecotype']
gi|327550468|gb|AEA97186.1| ATP-dependent protease ATP-binding subunit [Alteromonas macleodii
str. 'Deep ecotype']
Length = 346
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD +VIGQE AKKVLSVAVYNHYKR+ + ++ +G
Sbjct: 65 LPKPTEIHAHLDDYVIGQEHAKKVLSVAVYNHYKRLRNGDVHEG---------------- 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R Q D+ IGFGA V++ ++
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAQKDTGIGFGATVKSK-----DNSKQ 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L + VE DL+ YGLIPEF+GR P++ SL L ED L+++L EPKNA+
Sbjct: 284 ISELFKQVEPEDLVKYGLIPEFIGRLPVVTSLEELNEDALIQILREPKNAI 334
>gi|28211966|ref|NP_782910.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium tetani
E88]
gi|46576541|sp|Q891J8.1|CLPX_CLOTE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|28204409|gb|AAO36847.1| ATP-dependent clp protease ATP-binding subunit clpX [Clostridium
tetani E88]
Length = 431
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 218/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD +VIGQ+ AKK LSVAVYNHYKRI N+ +D+
Sbjct: 62 LPKPSEIKSYLDDYVIGQDDAKKALSVAVYNHYKRINLNNV----------------NDD 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+LL+GPTGSGKTLLA+T+A+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 106 VELQKSNILLLGPTGSGKTLLAQTMAKFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQ+LLK+LEGTI +VP +G
Sbjct: 166 NADYDIEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQSLLKILEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I R ++SS+GFGA +++ V
Sbjct: 226 RKHPHQEFIQLNTTNILFICGGAFDGVDKLIERRTRNSSLGFGADIKSKRDENV------ 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL+ + DL+ +GLIPEF+GR PI V+L+AL D LV++LTEPKNAL
Sbjct: 280 GELLKKIMPEDLLKFGLIPEFIGRLPITVTLSALDRDALVEILTEPKNAL 329
>gi|71734283|ref|YP_273936.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|123637276|sp|Q48KY9.1|CLPX_PSE14 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|71554836|gb|AAZ34047.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. phaseolicola 1448A]
Length = 427
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 169/290 (58%), Positives = 218/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVDKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNAL 334
>gi|406967035|gb|EKD92236.1| hypothetical protein ACD_29C00105G0003 [uncultured bacterium]
Length = 422
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 217/290 (74%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
L +PKE+ + L+++V+GQ +AKK+LSVAVYNHYKR+ H KT A ++
Sbjct: 64 LASPKELHEELNQYVVGQHEAKKILSVAVYNHYKRLNHR----------KTQA-----ND 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+L +GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELSKSNILFIGPTGSGKTLLAQTLARILNVPFAIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ ++VE AQ G++YIDE+DKI +K +S +++RDVSGEGVQQALLK++EGTI ++P +G
Sbjct: 169 KCNYDVEKAQTGIIYIDEIDKIARKTDSPSLTRDVSGEGVQQALLKLIEGTIASIPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF DL+K I +R DS IGF A V+A + D
Sbjct: 229 RKHPQQEYLQVDTTNILFICGGAFADLDKIIQQRSDDSGIGFSANVQAKNKIQAAD---- 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+++ VES DL+ YGLIPEFVGR P++ L L E L+++LT PKNAL
Sbjct: 285 --IMKKVESQDLMKYGLIPEFVGRLPVISVLDELDEAALLEILTRPKNAL 332
>gi|416243367|ref|ZP_11633888.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis BC7]
gi|326569250|gb|EGE19311.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis BC7]
Length = 438
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 165/294 (56%), Positives = 219/294 (74%), Gaps = 19/294 (6%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
L + LP PKE+ LD +VIGQ+ AKK L+VAVYNHYKR+ AN KK +
Sbjct: 82 LNKVLPKPKELRAHLDDYVIGQDVAKKALAVAVYNHYKRLKVANDKKDT----------- 130
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
D VEL KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 131 --DGVELSKSNILLIGPTGSGKTLLAQTLAKMLDVPFAMADATTLTEAGYVGEDVENIVQ 188
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL A+++V+ A++G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ N+P
Sbjct: 189 KLLQAADYDVQKAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVANIP 248
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHPR + IQ+DT +IL I GGAF L+K I +R + + IGF A V+A + +T+
Sbjct: 249 PQGGRKHPRQEMIQVDTSNILMIVGGAFAGLDKVIRQRTEKTGIGFHADVKAQDESSITE 308
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE+ DLI +GLIPE +GR P+L SL L E LV++LTEPKNAL
Sbjct: 309 ------LFREVEAEDLIKFGLIPELIGRLPVLASLEELDEAALVQILTEPKNAL 356
>gi|226944448|ref|YP_002799521.1| ATP-dependent protease ATP-binding subunit ClpX [Azotobacter
vinelandii DJ]
gi|226719375|gb|ACO78546.1| ATP-dependent Clp protease, ATP binding subunit ClpX [Azotobacter
vinelandii DJ]
Length = 426
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 217/291 (74%), Gaps = 23/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ D D+
Sbjct: 65 LPAPKEISTILDQYVIGQERAKKVLAVAVYNHYKRLNQR----------------DKKDD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA-NMRAGVTDAAV 499
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ ++ + +A
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSPDVGKKIGEA-- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE DL+ +GLIPEFVGR P++ +L L E LV++LTEPKNAL
Sbjct: 287 ----LRDVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALVQILTEPKNAL 333
>gi|410092111|ref|ZP_11288651.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
viridiflava UASWS0038]
gi|409760539|gb|EKN45672.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
viridiflava UASWS0038]
Length = 427
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 217/290 (74%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSIMRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNAL 334
>gi|262373454|ref|ZP_06066732.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
junii SH205]
gi|262311207|gb|EEY92293.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
junii SH205]
Length = 436
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 162/295 (54%), Positives = 220/295 (74%), Gaps = 28/295 (9%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI-----YHANLKKGSGAEPKTAAAV 315
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ +HA+
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKRLKVGQTHHAH--------------- 104
Query: 316 DNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESIL 375
++E+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 105 ---QDIEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIV 161
Query: 376 YKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV 435
KLL +A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++
Sbjct: 162 QKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASI 221
Query: 436 PEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVT 495
P +G RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+
Sbjct: 222 PPQGGRKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTADVKNK-----D 276
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
D+ S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 277 DSKKVSELFRQVEATDLVKFGLIPEFIGRLPVIATLDELDEEALMQILTEPKNAL 331
>gi|84387736|ref|ZP_00990752.1| ATP-dependent protease ATP-binding subunit [Vibrio splendidus
12B01]
gi|84377419|gb|EAP94286.1| ATP-dependent protease ATP-binding subunit [Vibrio splendidus
12B01]
Length = 426
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 169/293 (57%), Positives = 220/293 (75%), Gaps = 21/293 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP+EI + LD +VIGQE AKKVL+VAVYNHYKR+ + + T A
Sbjct: 63 ESLPTPREIREHLDDYVIGQEYAKKVLAVAVYNHYKRLRNGD----------TTA----- 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 EGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + SSIGFGA VR+ +A
Sbjct: 228 GGRKHPQQEFLQVDTSKILFICGGAFSGLDKVIEQRVEKGSSIGFGAEVRSK-----DEA 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE DL+ YGLIPEF+GR P+ +LT L E+ LV++L EPKNAL
Sbjct: 283 KTVGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALVQILCEPKNAL 335
>gi|319637747|ref|ZP_07992513.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
mucosa C102]
gi|317400902|gb|EFV81557.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
mucosa C102]
Length = 421
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 168/296 (56%), Positives = 216/296 (72%), Gaps = 21/296 (7%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
N + LPTP EI L+ VIGQE AKK L+V+VYNHYKR+ H PK
Sbjct: 59 ENAEKKLPTPAEIVANLNDHVIGQEHAKKALAVSVYNHYKRLRH----------PKA--- 105
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
+ VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I
Sbjct: 106 ---EGKVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQI 162
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +
Sbjct: 163 ITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAS 222
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V +
Sbjct: 223 VPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSK----- 277
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ A S+L E+VE DLI +GLIPE +GR P++ +L L ED LV +LTEPKNAL
Sbjct: 278 DENADISALFETVEPEDLIKFGLIPELIGRLPMIATLAELDEDALVNILTEPKNAL 333
>gi|300721990|ref|YP_003711270.1| ATPase [Xenorhabdus nematophila ATCC 19061]
gi|297628487|emb|CBJ89054.1| ATPase, chaperone subunit of serine protease [Xenorhabdus
nematophila ATCC 19061]
Length = 423
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 222/291 (76%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + LD +VIGQE+AKKVL+VAVYNHYKR L+ G D ++
Sbjct: 64 LPTPHEIRQHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTNNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K +S+R SS IGF A V+ G ++ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVVSQRLNVSSGIGFSATVK-----GESEKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +LT L E+ L+++L EPKNAL
Sbjct: 283 EGQLLAQVEPEDLIKFGLIPEFIGRLPVVATLTELNEEALIQILQEPKNAL 333
>gi|359428059|ref|ZP_09219101.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
sp. NBRC 100985]
gi|358236510|dbj|GAB00640.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
sp. NBRC 100985]
Length = 436
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 161/290 (55%), Positives = 218/290 (75%), Gaps = 18/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ K + +
Sbjct: 60 LPKPHEIRAALDQYVIGQDVAKKTLSVAVYNHYKRL-------------KVGQSQHGNPE 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ D+
Sbjct: 227 RKHPQQEFIQIDTANILFICGGAFSGLEKIVQQRQEKGGIGFTADVKNK-----DDSKKV 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 282 SELFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNAL 331
>gi|149186484|ref|ZP_01864796.1| ATP-dependent protease ATP-binding subunit [Erythrobacter sp.
SD-21]
gi|148829711|gb|EDL48150.1| ATP-dependent protease ATP-binding subunit [Erythrobacter sp.
SD-21]
Length = 418
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 215/291 (73%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+PTPKEI + L+ +VIGQ++AK+VLSVAV+NHYKR+ H K G
Sbjct: 63 DVPTPKEIFETLNDYVIGQDRAKRVLSVAVHNHYKRLKHGG-KAG--------------- 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTG GKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 DVELAKSNILLVGPTGCGKTLLAQTLARTFDVPFTMADATTLTEAGYVGEDVENIILKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+++NVE AQ G+VYIDE+DKIT+KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 167 QASDYNVEKAQHGIVYIDEIDKITRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT +ILFICGGAF LEK I++R Q SIGFGA V D
Sbjct: 227 GRKHPQQEFLQVDTTNILFICGGAFAGLEKIIADRLQKRSIGFGAHV------ADPDKRR 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LLE E DL+ +GLIPEFVGR P++ +L L D L+ +LTEPKNAL
Sbjct: 281 IGELLEKGEPEDLLKFGLIPEFVGRLPVIATLRDLDTDALITILTEPKNAL 331
>gi|410727501|ref|ZP_11365718.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Clostridium
sp. Maddingley MBC34-26]
gi|410598747|gb|EKQ53314.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Clostridium
sp. Maddingley MBC34-26]
Length = 429
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 220/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P EI + LD +VIGQE+AKK L+VAVYNHYKRI N K D +
Sbjct: 60 VPKPNEIKEYLDSYVIGQERAKKSLAVAVYNHYKRI---NTNK-------------EDID 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELSKSNILLLGPTGSGKTLLAQTLARFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 NADYDVEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I R + SS+GFGA ++A V
Sbjct: 224 RKHPHQEFIQINTSNILFICGGAFDGVDKIIENRTRKSSMGFGAKIQAKNEKDV------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SLL+ + +DL+ +GLIPEFVGR PILV+L +L +D L+++LT+PKNAL
Sbjct: 278 GSLLKEIMPADLLKFGLIPEFVGRLPILVTLESLDKDALIQILTKPKNAL 327
>gi|416216368|ref|ZP_11623692.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 7169]
gi|416236088|ref|ZP_11630454.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 12P80B1]
gi|416245838|ref|ZP_11634733.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis BC8]
gi|326561828|gb|EGE12163.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 7169]
gi|326563374|gb|EGE13639.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 12P80B1]
gi|326571925|gb|EGE21930.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis BC8]
Length = 438
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 164/294 (55%), Positives = 219/294 (74%), Gaps = 19/294 (6%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
L + LP PKE+ LD +VIGQ+ AKK L+VAVYNHYKR+ AN KK +
Sbjct: 82 LNKVLPKPKELRAHLDDYVIGQDVAKKALAVAVYNHYKRLKVANDKKDT----------- 130
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
D VEL KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 131 --DGVELSKSNILLIGPTGSGKTLLAQTLAKMLDVPFAMADATTLTEAGYVGEDVENIVQ 188
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL A+++V+ A++G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ N+P
Sbjct: 189 KLLQAADYDVQKAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVANIP 248
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHPR + IQ+DT +IL I GGAF L+K I +R + + IGF A V+A + +T+
Sbjct: 249 PQGGRKHPRQEMIQVDTSNILMIVGGAFAGLDKVIRQRTEKTGIGFHADVKAQDESSITE 308
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE+ DLI +GLIPE +GR P++ SL L E LV++LTEPKNAL
Sbjct: 309 ------LFREVEAEDLIKFGLIPELIGRLPVIASLEELDEAALVQILTEPKNAL 356
>gi|296134053|ref|YP_003641300.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Thermincola
potens JR]
gi|296032631|gb|ADG83399.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermincola
potens JR]
Length = 419
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 167/297 (56%), Positives = 222/297 (74%), Gaps = 23/297 (7%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
G +GE LP P+EI + LD++VIGQE AKK L+VAVYNHYKRI N
Sbjct: 55 GVEIGE-LPKPREIKEILDQYVIGQEPAKKALAVAVYNHYKRINMGN------------- 100
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
D+VEL+KSN++++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+
Sbjct: 101 ---KIDDVELQKSNIVMLGPTGSGKTLLAQTLARLLNVPFAIADATSLTEAGYVGEDVEN 157
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
IL KL+ A+++VE A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+
Sbjct: 158 ILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVA 217
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 493
+VP +G RKHP + IQ+DT +ILFICGGAF +EK I R ++GFGA +++
Sbjct: 218 SVPPQGGRKHPHQEFIQLDTTNILFICGGAFDGIEKIIQNRIGKKTLGFGAEIKSQKEKN 277
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
V D +L+ + DL+ +GLIPEFVGR P++V+L AL E+ LV++LTEP+NAL
Sbjct: 278 VGD------ILKHILPEDLLKFGLIPEFVGRLPVIVTLEALDENALVRILTEPRNAL 328
>gi|430744132|ref|YP_007203261.1| LOW QUALITY PROTEIN: endopeptidase Clp ATP-binding regulatory
subunit ClpX [Singulisphaera acidiphila DSM 18658]
gi|430015852|gb|AGA27566.1| LOW QUALITY PROTEIN: endopeptidase Clp ATP-binding regulatory
subunit ClpX [Singulisphaera acidiphila DSM 18658]
Length = 459
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 167/297 (56%), Positives = 215/297 (72%), Gaps = 25/297 (8%)
Query: 256 NLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAV 315
L D+PTP+EI + LD +VI Q++AKKVLSVAV+NHYKR+ H
Sbjct: 86 TLFTDIPTPREIKEQLDAYVIDQDRAKKVLSVAVHNHYKRLVHGE--------------- 130
Query: 316 DNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESIL 375
D D ++E++KSN+LLMGPTG GKTLLA+TLAR +NVPF I DATTLT+AGYVGEDVE+IL
Sbjct: 131 DADSSIEIDKSNILLMGPTGCGKTLLARTLARILNVPFAIGDATTLTEAGYVGEDVENIL 190
Query: 376 YKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV 435
KLL A+F++E+AQ+G++YIDE+DKI K +++I+RDVSGEGVQQALLKMLEGT+ NV
Sbjct: 191 LKLLHAADFDLESAQRGIIYIDEIDKIGKTNHNVSITRDVSGEGVQQALLKMLEGTVANV 250
Query: 436 PEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAG 493
P +G RKHP IQ+DT +ILFICGG FV LE I+ R +IGFG+ A N+ G
Sbjct: 251 PPQGGRKHPEQQYIQLDTTNILFICGGTFVGLENLIARRVGRKTIGFGSQSEAEHNVELG 310
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SLL+ V S D++ +G+IPEFVGR P++ L L D LV+++TEP+NAL
Sbjct: 311 --------SLLDKVTSDDILEFGMIPEFVGRLPVVCPLMPLDVDALVQIMTEPRNAL 359
>gi|407974426|ref|ZP_11155335.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
indicus C115]
gi|407430115|gb|EKF42790.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
indicus C115]
Length = 424
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 169/294 (57%), Positives = 222/294 (75%), Gaps = 26/294 (8%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ AK+VLSVAV+NHYKR+ HA+ K+A
Sbjct: 63 EGVPTPQEIMTVLDDYVIGQSHAKRVLSVAVHNHYKRLAHAS---------KSA------ 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 -DVELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTD 496
G RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGFGA V + + R G
Sbjct: 227 GGRKHPQQEFLQVDTANILFICGGAFAGLDKIISDRGRKTSIGFGATVASPEDRRTG--- 283
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE DL+ +GLIPEFVGR P+L +L L E LV++L+EPKNAL
Sbjct: 284 -----ELFRQVEPEDLLKFGLIPEFVGRLPVLATLEDLDEAALVQILSEPKNAL 332
>gi|440226209|ref|YP_007333300.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhizobium
tropici CIAT 899]
gi|440037720|gb|AGB70754.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhizobium
tropici CIAT 899]
Length = 425
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 165/292 (56%), Positives = 223/292 (76%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G +
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------D 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAPDDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L D L+++L+EPKNAL
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDADALIQILSEPKNAL 333
>gi|416237863|ref|ZP_11631218.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis BC1]
gi|326568951|gb|EGE19020.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis BC1]
Length = 438
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 164/294 (55%), Positives = 219/294 (74%), Gaps = 19/294 (6%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
L + LP PKE+ LD +VIGQ+ AKK L+VAVYNHYKR+ AN KK +
Sbjct: 82 LNKVLPKPKELRAHLDDYVIGQDVAKKALAVAVYNHYKRLKVANDKKDT----------- 130
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
D VEL KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 131 --DGVELSKSNILLIGPTGSGKTLLAQTLAKMLDVPFAMADATTLTEAGYVGEDVENIVQ 188
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL A+++V+ A++G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ N+P
Sbjct: 189 KLLQAADYDVQKAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVANIP 248
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHPR + IQ+DT +IL I GGAF L+K I +R + + IGF A V+A + +T+
Sbjct: 249 PQGGRKHPRQEMIQVDTSNILMIVGGAFAGLDKVIRQRTEKTGIGFHADVKAQDESSITE 308
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE+ DLI +GLIPE +GR P++ SL L E LV++LTEPKNAL
Sbjct: 309 ------LFREVEAEDLIKFGLIPELIGRLPVIASLEELDEAALVQILTEPKNAL 356
>gi|223938521|ref|ZP_03630413.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [bacterium
Ellin514]
gi|223892783|gb|EEF59252.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [bacterium
Ellin514]
Length = 432
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 163/291 (56%), Positives = 217/291 (74%), Gaps = 4/291 (1%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++P P +I + LD+ IGQ+ AKK L+VAV+NHYKRI H + + E A D
Sbjct: 59 NIPKPIDIKRQLDRHCIGQDHAKKTLAVAVHNHYKRILHEPGAQANETEGAEDLAADRHA 118
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VE+EKSN+L++GPTGSGKTLLA+TLA+ ++VPF IADATTLT+AGYVGEDVE+I+ +LL
Sbjct: 119 EVEIEKSNILMVGPTGSGKTLLARTLAQILDVPFAIADATTLTEAGYVGEDVENIILRLL 178
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++V+ AQ+G+VYIDE+DKI +K E+++I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 179 QNADYDVKRAQRGIVYIDEIDKIARKTENVSITRDVSGEGVQQALLKILEGTICNVPPQG 238
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + I++DT ILFICGGAFV LEK I R +GF A V +A D
Sbjct: 239 GRKHPQQEYIRVDTSHILFICGGAFVGLEKVIHRRLGKHVMGFNA-VEQGHKAASVDRL- 296
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L+ +E DL+++G IPEF+GR P++ L+ LTEDQLV +LT+PKNAL
Sbjct: 297 --QILQHIEPEDLLSFGFIPEFIGRLPMMTVLSELTEDQLVSILTDPKNAL 345
>gi|292493107|ref|YP_003528546.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Nitrosococcus
halophilus Nc4]
gi|291581702|gb|ADE16159.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Nitrosococcus
halophilus Nc4]
Length = 424
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 217/290 (74%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+++VIGQ +AKKVLSVAVYNHYKR+ +D+
Sbjct: 66 LPTPHEIRDILNQYVIGQNRAKKVLSVAVYNHYKRLQLGK----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELSKSNILLIGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 170 KCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q++T +ILFICGGAF LEK I +R + IGF A V++ V D
Sbjct: 230 RKHPQQEFLQVNTANILFICGGAFAGLEKIIRDRSKKGGIGFSAEVKS-----VEDKRSM 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L++VE DLI YGLIPEFVGR P++ +L L E L+++LTEPKNAL
Sbjct: 285 GEILQAVEPEDLIKYGLIPEFVGRMPVVATLDELDEAALIRILTEPKNAL 334
>gi|121534155|ref|ZP_01665980.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermosinus
carboxydivorans Nor1]
gi|121307258|gb|EAX48175.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermosinus
carboxydivorans Nor1]
Length = 420
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 222/291 (76%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+P PKEI + LD++VIGQE+AKK L+VAVYNHYKRI NL GS E
Sbjct: 60 DIPKPKEIKEILDQYVIGQEEAKKTLAVAVYNHYKRI---NL--GSKME----------- 103
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN++++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 104 DVELQKSNIVMLGPTGSGKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVENILLKLI 163
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 164 QAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIASVPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF ++K IS R ++GFGA +++ + V
Sbjct: 224 GRKHPHQEFIQIDTTNILFICGGAFDGIDKIISARTGKKTLGFGADIKSREKKQV----- 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L + DL+ +GLIPEFVGR P++V+L AL ED LV++L EPKNAL
Sbjct: 279 -GEILRQILPEDLLKFGLIPEFVGRLPVIVTLDALDEDALVRILVEPKNAL 328
>gi|254492062|ref|ZP_05105238.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylophaga
thiooxidans DMS010]
gi|224462726|gb|EEF78999.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylophaga
thiooxydans DMS010]
Length = 423
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 214/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+EI + LD +VIGQEKAK+ LSVAVYNHYKR+ + DD
Sbjct: 63 LPTPREINEALDNYVIGQEKAKRYLSVAVYNHYKRLRSGH----------------KDDG 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELSKSNILLIGPTGSGKTLLAETLARQLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ A+ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 167 KCDYDVDKAETGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ILFICGGAF L+K I R IGF A V++ + +
Sbjct: 227 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIRNRTHKGGIGFSADVKS-----LDEQRPL 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L +VE DLI YGLIPEFVGR P++ +L L E LV++LTEPKNAL
Sbjct: 282 SESLRTVEPEDLIQYGLIPEFVGRLPVVATLDELDEAALVQILTEPKNAL 331
>gi|392949120|ref|ZP_10314715.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
pentosus KCA1]
gi|392435709|gb|EIW13638.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
pentosus KCA1]
Length = 422
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 216/291 (74%), Gaps = 14/291 (4%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+PTPK+I LD++VIGQ +AK+ LSVAVYNHYKR+ AE D
Sbjct: 60 DIPTPKQIVDELDQYVIGQNEAKRTLSVAVYNHYKRVKAMADSNDEEAE----------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
EL+KSN+ L+GPTGSGKT LA++LAR ++VPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 110 GPELQKSNISLVGPTGSGKTFLAQSLARILDVPFAIADATTLTEAGYVGEDVENILLKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 170 QNADYDVERAEKGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFI GGAF +E + R D +IGFG + R V D
Sbjct: 230 GRKHPQQEFIQIDTTNILFIVGGAFDGIEDIVKRRLGDKTIGFGTD--TDGRNAVLDD-- 285
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ SL++ V DL+ +GLIPEF+GR PIL +L LTED LV++LTEPKNAL
Sbjct: 286 SKSLMQQVVPEDLLQFGLIPEFIGRLPILTALERLTEDDLVRILTEPKNAL 336
>gi|222148265|ref|YP_002549222.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
vitis S4]
gi|254763828|sp|B9JVD6.1|CLPX_AGRVS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|221735253|gb|ACM36216.1| ATP-dependent Clp protease ATP-binding subunit [Agrobacterium vitis
S4]
Length = 425
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 166/292 (56%), Positives = 223/292 (76%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ KG +
Sbjct: 66 VPTPQDIIKILDEYVIGQRQAKKILSVAVHNHYKRLSHAS--KGG--------------D 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V + + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVVSPEDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNAL 333
>gi|262277076|ref|ZP_06054869.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [alpha
proteobacterium HIMB114]
gi|262224179|gb|EEY74638.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [alpha
proteobacterium HIMB114]
Length = 423
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 164/292 (56%), Positives = 224/292 (76%), Gaps = 21/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTPKEI L+++VIGQ+KAK++LSVAV+NHYKR+ H +
Sbjct: 57 EGVPTPKEIFSILNEYVIGQKKAKQILSVAVHNHYKRLGHTE---------------KSS 101
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++VEL KSN+LL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 102 NDVELAKSNILLIGPTGCGKTLLAQTLAKILDVPFTMADATTLTEAGYVGEDVENIILKL 161
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K E+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 162 LQAADYNVEKAQRGIVYIDEVDKISRKTENPSITRDVSGEGVQQALLKIMEGTVASVPPQ 221
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFI GGAF ++K IS+R Q SSIGFGA ++ ++ GV +
Sbjct: 222 GGRKHPQQEFLQVDTTNILFIVGGAFAGIDKIISDRGQGSSIGFGAKIKDKIKKGVGE-- 279
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L++ VE DL+ +GLIPEF+GR PI+ +L L E+ LV++L EPKN+L
Sbjct: 280 ----LIKDVEPEDLLKFGLIPEFIGRLPIISTLEDLDEESLVQILEEPKNSL 327
>gi|257093850|ref|YP_003167491.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046374|gb|ACV35562.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 423
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 218/291 (74%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTPKEI LD++VIGQ++AK++LSVAVYNHYKR+ H + G D
Sbjct: 63 DLPTPKEISALLDQYVIGQDQAKRILSVAVYNHYKRLRHHG-RAG--------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
++EL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DIELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++ E AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QKADYDTEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIIEGTVASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R IGFGA V++ ++
Sbjct: 228 GRKHPNQDFVQVDTTNILFICGGAFDGLEKVIRNRSDRGGIGFGAEVKSK-----DNSKA 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPE +GR P++ +L L+ LV++L EPKNAL
Sbjct: 283 IGEVLRGVEPEDLIKFGLIPELIGRLPVIATLEELSAAALVQILIEPKNAL 333
>gi|254451899|ref|ZP_05065336.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Octadecabacter arcticus 238]
gi|198266305|gb|EDY90575.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Octadecabacter arcticus 238]
Length = 378
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 164/301 (54%), Positives = 221/301 (73%), Gaps = 23/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +PTP EIC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA+
Sbjct: 8 TKSAGLKSSEGVPTPLEICQVLDDYVIGQRHAKRVLSVAVHNHYKRLNHAD--------- 58
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN++L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 59 --------KSDIELAKSNIMLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 110
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 111 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 170
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GTI +VP +G RKHP+ + +Q+DT +ILF+CGGAF L+K I++R + + +GFGA VR
Sbjct: 171 GTIASVPPQGGRKHPQQEFLQVDTTNILFVCGGAFAGLDKIIAQRGKGAGMGFGAEVRGP 230
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + +E DL+ +GLIPEFVGR P++ +L L ED LV +L++PKNA
Sbjct: 231 DERGV------GEIFSDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILSKPKNA 284
Query: 550 L 550
L
Sbjct: 285 L 285
>gi|345864968|ref|ZP_08817162.1| ATP-dependent Clp protease ATP-binding subunit ClpX [endosymbiont
of Tevnia jerichonana (vent Tica)]
gi|345878325|ref|ZP_08830044.1| ATP-dependent Clp protease ATP-binding subunit clpX [endosymbiont
of Riftia pachyptila (vent Ph05)]
gi|344224680|gb|EGV51064.1| ATP-dependent Clp protease ATP-binding subunit clpX [endosymbiont
of Riftia pachyptila (vent Ph05)]
gi|345123906|gb|EGW53792.1| ATP-dependent Clp protease ATP-binding subunit ClpX [endosymbiont
of Tevnia jerichonana (vent Tica)]
Length = 425
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 166/297 (55%), Positives = 218/297 (73%), Gaps = 21/297 (7%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
G + LP P EI K LD++VIGQ++AKKVLSVAVYNHYKR+
Sbjct: 58 GEKSSDSLPRPHEINKTLDQYVIGQQRAKKVLSVAVYNHYKRL----------------E 101
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
++ + ++EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+
Sbjct: 102 SLGKESDIELAKSNILLIGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVEN 161
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
I+ KLL + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 162 IIQKLLQKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVA 221
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 493
+VP +G RKHP+ + +Q+DT +ILFI GGAF LEK I +R + IGF A V +
Sbjct: 222 SVPPQGGRKHPQQEFLQVDTSNILFIVGGAFSGLEKVIKDRSEKGGIGFSAEVHSK---- 277
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+A ++ VE DLI YGLIPEFVGR P++ +L L ED LVK+LTEPKNAL
Sbjct: 278 -DEARSVGEIIVDVEPEDLIKYGLIPEFVGRLPVVATLQELDEDSLVKILTEPKNAL 333
>gi|443473069|ref|ZP_21063094.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
pseudoalcaligenes KF707]
gi|442903632|gb|ELS28923.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
pseudoalcaligenes KF707]
Length = 426
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 213/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ D D+
Sbjct: 65 LPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRLNQR----------------DKKDD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ A
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFAGLEKVIQNRSTRGGIGFNAEVRSKELGKKVGEA-- 286
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL
Sbjct: 287 ---LREVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNAL 333
>gi|103488220|ref|YP_617781.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingopyxis
alaskensis RB2256]
gi|123379515|sp|Q1GPH4.1|CLPX_SPHAL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|98978297|gb|ABF54448.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sphingopyxis
alaskensis RB2256]
Length = 423
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 175/307 (57%), Positives = 225/307 (73%), Gaps = 31/307 (10%)
Query: 246 GGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGS 305
GG +R G+ +PTP EIC+ LD +VIGQ KAK+VLSVAV+NHYKR+ AN +G
Sbjct: 54 GGVAARKDGA-----VPTPLEICQHLDAYVIGQNKAKRVLSVAVHNHYKRL--ANSGRG- 105
Query: 306 GAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAG 365
++VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AG
Sbjct: 106 -------------EDVELAKSNILLVGPTGSGKTLLAQTLARFLDVPFTMADATTLTEAG 152
Query: 366 YVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
YVGEDVE+I+ KLL +++NVE AQ+G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALL
Sbjct: 153 YVGEDVENIILKLLQSSDYNVEKAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALL 212
Query: 426 KMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 485
K++EGT +VP +G RKHP+ + +Q+DT +ILFI GGAF LEK I +R Q SIGFGA
Sbjct: 213 KLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFIAGGAFAGLEKIIGDRLQGKSIGFGAH 272
Query: 486 VRA--NMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVL 543
V RAG +L+ +E DL+ +GLIPEFVGR P++ +L L D LVK+L
Sbjct: 273 VAGPDERRAG--------EVLKQIEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVKIL 324
Query: 544 TEPKNAL 550
EPKNAL
Sbjct: 325 GEPKNAL 331
>gi|224824982|ref|ZP_03698088.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Pseudogulbenkiania ferrooxidans 2002]
gi|347540403|ref|YP_004847828.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudogulbenkiania sp. NH8B]
gi|224602653|gb|EEG08830.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Pseudogulbenkiania ferrooxidans 2002]
gi|345643581|dbj|BAK77414.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Pseudogulbenkiania sp. NH8B]
Length = 424
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 165/293 (56%), Positives = 217/293 (74%), Gaps = 21/293 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ LPTP+EI LD+++IGQ+ AKK LSVAVYNHYKR+Y +
Sbjct: 63 GQPLPTPQEIRSDLDQYIIGQDIAKKTLSVAVYNHYKRLYTPT----------------D 106
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFVIADATTLT+AGYVGEDVE I+ K
Sbjct: 107 KDDVELAKSNILLIGPTGSGKTLLAQSLARLLDVPFVIADATTLTEAGYVGEDVEHIIQK 166
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQ+G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ ++P
Sbjct: 167 LLQKCDYDVEKAQRGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASIPP 226
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP + IQ+DT +ILFICGGAF LEK I R + IGFGA V + ++
Sbjct: 227 QGGRKHPNQEFIQVDTTNILFICGGAFDGLEKIIRRRSEKGGIGFGAEVSSK-----DES 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L + VE DLI +GLIPE +GR P++ +L L E+ LV +LT+PKNAL
Sbjct: 282 KSISVLFKDVEPGDLIKFGLIPELIGRLPVVATLEELDEEALVTILTQPKNAL 334
>gi|254441479|ref|ZP_05054972.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Octadecabacter antarcticus 307]
gi|198251557|gb|EDY75872.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Octadecabacter antarcticus 307]
Length = 422
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 163/301 (54%), Positives = 221/301 (73%), Gaps = 23/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +PTP EIC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA+
Sbjct: 52 TKSAGFKSAEGVPTPLEICQVLDDYVIGQRHAKRVLSVAVHNHYKRLNHAD--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN++L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 --------KSDIELAKSNIMLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILF+CGGAF L+K I++R + + +GFGA VR
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFVCGGAFAGLDKIIAQRGKGAGMGFGAEVRGP 274
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + +E DL+ +GLIPEFVGR P++ +L L ED LV +L++PKNA
Sbjct: 275 DERGV------GEIFNDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILSKPKNA 328
Query: 550 L 550
L
Sbjct: 329 L 329
>gi|254429578|ref|ZP_05043285.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Alcanivorax
sp. DG881]
gi|196195747|gb|EDX90706.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Alcanivorax
sp. DG881]
Length = 426
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 165/293 (56%), Positives = 219/293 (74%), Gaps = 20/293 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
GE LP P EI LD++VIGQE+AKKVL+VAVYNHYKR+ G G
Sbjct: 62 GERLPKPNEIKDTLDEYVIGQERAKKVLAVAVYNHYKRLRSG----GKGR---------- 107
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 108 -DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 166
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 167 LLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 226
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP+ + +Q+DT ++LFICGGAF L+K I ER + IGF A V++ +
Sbjct: 227 QGGRKHPQQEFLQVDTSNMLFICGGAFAGLDKVIRERSEKGGIGFSAEVKSK-----DNT 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DL+ YGLIPEF+GR P++ +L L+E+ L+++LTEP+NAL
Sbjct: 282 RNLGELLVDVEPEDLVKYGLIPEFIGRLPVIATLEELSEEALIQILTEPRNAL 334
>gi|312622970|ref|YP_004024583.1| ATP-dependent clp protease, ATP-binding subunit clpx
[Caldicellulosiruptor kronotskyensis 2002]
gi|312203437|gb|ADQ46764.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Caldicellulosiruptor kronotskyensis 2002]
Length = 433
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 161/290 (55%), Positives = 222/290 (76%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI + LD++V+GQ+ AKK+LSVAVYNHYKRIY+ + KK D+
Sbjct: 61 LPTPKEIKEFLDQYVVGQDHAKKILSVAVYNHYKRIYYHDTKK---------------DD 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 106 VELQKSNILMLGPTGSGKTYLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRLIQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G++YIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 166 NADYDIERAERGIIYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF +EK I +R + ++GF A + + + D
Sbjct: 226 RKHPHQEFIQIDTTNILFICGGAFEGIEKIIEKRIGEKTLGFNAKIESKKEKKIGD---- 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L + DL+ +G+IPEF+GR PI+V+L AL ++ L+K+LTEPKNAL
Sbjct: 282 --ILRQIMPQDLLKFGMIPEFIGRVPIIVTLDALDKEALIKILTEPKNAL 329
>gi|302871326|ref|YP_003839962.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Caldicellulosiruptor obsidiansis OB47]
gi|302574185|gb|ADL41976.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Caldicellulosiruptor obsidiansis OB47]
Length = 433
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 161/290 (55%), Positives = 222/290 (76%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI + LD++V+GQ+ AKK+LSVAVYNHYKRIY+ + KK D+
Sbjct: 61 LPTPKEIKEFLDQYVVGQDHAKKILSVAVYNHYKRIYYHDTKK---------------DD 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 106 VELQKSNILMLGPTGSGKTYLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRLIQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G++YIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 166 NADYDIERAERGIIYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF +EK I +R + ++GF A + + + D
Sbjct: 226 RKHPHQEFIQIDTTNILFICGGAFEGIEKIIEKRIGEKTLGFNAKIESKKEKKIGD---- 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L + DL+ +G+IPEF+GR PI+V+L AL ++ L+K+LTEPKNAL
Sbjct: 282 --ILRQIMPQDLLKFGMIPEFIGRVPIIVTLDALDKEALIKILTEPKNAL 329
>gi|387127881|ref|YP_006296486.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylophaga
sp. JAM1]
gi|386274943|gb|AFI84841.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylophaga
sp. JAM1]
Length = 361
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 213/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P EI L+ +VIGQ KAK+VLSVAVYNHYKR+ H +D+
Sbjct: 1 MPSPHEIDSALNNYVIGQAKAKRVLSVAVYNHYKRLRHGT----------------KNDD 44
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 45 VELSKSNILLIGPTGSGKTLLAETLARQLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 104
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE A+ G+VYIDE+DKI+KK+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 105 KCDYDVEKAETGIVYIDEIDKISKKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 164
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ILFICGGAF L+K I R IGF A V++ V + +
Sbjct: 165 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIRNRTHKGGIGFSAEVKS-----VDTKSPS 219
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE DLI YGLIPEFVGR P++ +L L E LV++LTEPKNAL
Sbjct: 220 SEALRGVEPEDLIQYGLIPEFVGRLPVVATLEELDEAALVQILTEPKNAL 269
>gi|262380155|ref|ZP_06073310.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens SH164]
gi|262298349|gb|EEY86263.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens SH164]
Length = 438
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 163/290 (56%), Positives = 219/290 (75%), Gaps = 17/290 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ K S KT +D
Sbjct: 60 LPKPHEIRAALDQYVIGQDIAKKTLSVAVYNHYKRL------KVSQNGHKT------EDK 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A++++E AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 168 KADYDIEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT ++LFICGGAF LEK + R++ IGF A V++ +
Sbjct: 228 RKHPQQEFIQVDTSNVLFICGGAFSGLEKIVQHRQEKGGIGFTAEVKSK-----DETKKL 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE +DL+ +GLIPEF+GR P++ +L L ED L+++LTEPKNAL
Sbjct: 283 AELFRQVEPADLVKFGLIPEFIGRLPVIATLEELDEDALMQILTEPKNAL 332
>gi|365841794|ref|ZP_09382848.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Flavonifractor plautii ATCC 29863]
gi|373115370|ref|ZP_09529544.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Lachnospiraceae bacterium 7_1_58FAA]
gi|364576946|gb|EHM54241.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Flavonifractor plautii ATCC 29863]
gi|371670436|gb|EHO35517.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Lachnospiraceae bacterium 7_1_58FAA]
Length = 438
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 162/301 (53%), Positives = 222/301 (73%), Gaps = 23/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
G ++ + +PTP+EI LD+++IGQE AK LSVAVYNHYKRIY G G
Sbjct: 52 EEQAGPDIPDVIPTPREIRDVLDQYIIGQEDAKIALSVAVYNHYKRIYF-----GGG--- 103
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++VEL+KSN+LLMGPTG GKTL A+TLAR + VPF IADATTLT+AGYVG+
Sbjct: 104 ---------EDVELQKSNILLMGPTGCGKTLFAQTLARILKVPFAIADATTLTEAGYVGD 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+IL +L+ A++++E A++G++Y+DE+DKI +K+E+ +I+RDVSGEGVQQALLK+LE
Sbjct: 155 DVENILLRLVQAADYDIELAERGIIYVDEIDKIARKSENTSITRDVSGEGVQQALLKILE 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ NVP +G RKHP + IQ++TK+ILFICGGAF +EK I +R +IGFGA +++
Sbjct: 215 GTVANVPPQGGRKHPHQEFIQINTKNILFICGGAFDGMEKIIEQRLNKKTIGFGADIQSK 274
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
T+S+L+ V+ DL+ +G+IPE VGR P++ +L AL + QLV++LTEPKNA
Sbjct: 275 KERD------TTSVLKQVQPHDLLKFGIIPELVGRLPVITTLNALDKGQLVRILTEPKNA 328
Query: 550 L 550
L
Sbjct: 329 L 329
>gi|220927144|ref|YP_002502446.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
nodulans ORS 2060]
gi|254763854|sp|B8IN27.1|CLPX_METNO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|219951751|gb|ACL62143.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium nodulans ORS 2060]
Length = 423
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 220/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA A ND
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHA--------------AKHND-- 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISARGKGTSIGFGATVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +VE DL+ +GLIPEFVGR P+L +L L E L ++L EPKNAL
Sbjct: 281 GEIFRNVEPEDLLKFGLIPEFVGRLPVLATLEDLDEIALKRILQEPKNAL 330
>gi|428307442|ref|YP_007144267.1| ATP-dependent Clp protease ATP-binding subunit clpX [Crinalium
epipsammum PCC 9333]
gi|428248977|gb|AFZ14757.1| ATP-dependent Clp protease ATP-binding subunit clpX [Crinalium
epipsammum PCC 9333]
Length = 445
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 167/303 (55%), Positives = 220/303 (72%), Gaps = 14/303 (4%)
Query: 251 RWGGSNLG-EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
R +NL +P P+E+ K LD+ VIGQ++AKKVLSVAVYNHYKR+ S +
Sbjct: 67 RAHSANLSLSQIPKPRELKKFLDEHVIGQQEAKKVLSVAVYNHYKRL--------SFIQS 118
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
K + DD V+L+KSN+LLMGPTG GKTLLA+TLA ++VPF +ADATTLT+AGYVGE
Sbjct: 119 KNSGKPGADDAVDLQKSNILLMGPTGCGKTLLAQTLASILDVPFAVADATTLTEAGYVGE 178
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+IL +LL A+F+VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLE
Sbjct: 179 DVENILLRLLQVADFDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLE 238
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ NVP +G RKHP D IQ+DT +I+FICGGAFV LEK + +R SIGF P
Sbjct: 239 GTVANVPPQGGRKHPYQDCIQIDTSNIMFICGGAFVGLEKVVEQRMGKKSIGFIQPGEGQ 298
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
R + +L +E DL+ +GLIPEF+GR P++ + L E+ L+++LTEP+NA
Sbjct: 299 PR-----EKRAADILRHMEPDDLVKFGLIPEFIGRIPVVAVVDPLDEEALMEILTEPRNA 353
Query: 550 LGQ 552
L +
Sbjct: 354 LAK 356
>gi|384921303|ref|ZP_10021288.1| ATP-dependent protease ATP-binding subunit ClpX [Citreicella sp.
357]
gi|384464818|gb|EIE49378.1| ATP-dependent protease ATP-binding subunit ClpX [Citreicella sp.
357]
Length = 421
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 166/301 (55%), Positives = 224/301 (74%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +P+P+EIC LD +VIGQ AK+VLSVAV+NHYKR+ H+
Sbjct: 52 TKGAGLKSSEGVPSPREICDVLDDYVIGQFTAKRVLSVAVHNHYKRLNHSQ--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
K+A ++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 KSA-------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + S++GFGA VR
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAMGFGADVRDP 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + +E DL+ +GLIPEFVGR P++ +L L E+ LV +LT+PKNA
Sbjct: 276 DERGV------GEIFGDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALVTILTKPKNA 329
Query: 550 L 550
L
Sbjct: 330 L 330
>gi|385338221|ref|YP_005892094.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
meningitidis WUE 2594]
gi|421550865|ref|ZP_15996866.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 69166]
gi|433471399|ref|ZP_20428785.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 68094]
gi|433475098|ref|ZP_20432439.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 88050]
gi|433477816|ref|ZP_20435136.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 70012]
gi|433515956|ref|ZP_20472724.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 2004090]
gi|433517763|ref|ZP_20474509.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 96023]
gi|433522086|ref|ZP_20478776.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 61103]
gi|433524225|ref|ZP_20480886.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 97020]
gi|433526203|ref|ZP_20482833.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 69096]
gi|433528439|ref|ZP_20485048.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM3652]
gi|433530640|ref|ZP_20487229.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM3642]
gi|433532909|ref|ZP_20489472.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 2007056]
gi|433534724|ref|ZP_20491264.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 2001212]
gi|433539150|ref|ZP_20495626.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 70030]
gi|319410635|emb|CBY91004.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
meningitidis WUE 2594]
gi|402329402|gb|EJU64763.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 69166]
gi|432208251|gb|ELK64229.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 68094]
gi|432210916|gb|ELK66871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 88050]
gi|432215481|gb|ELK71370.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 70012]
gi|432252882|gb|ELL08232.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 2004090]
gi|432253499|gb|ELL08843.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 96023]
gi|432259157|gb|ELL14431.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 61103]
gi|432259469|gb|ELL14740.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 97020]
gi|432260967|gb|ELL16224.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 69096]
gi|432265240|gb|ELL20436.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM3652]
gi|432266732|gb|ELL21914.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 2007056]
gi|432267147|gb|ELL22328.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM3642]
gi|432271466|gb|ELL26591.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 2001212]
gi|432273512|gb|ELL28610.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 70030]
Length = 414
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 171/314 (54%), Positives = 219/314 (69%), Gaps = 26/314 (8%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+ GG G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTPSESAGGEPEESGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNAL 550
D L+ +LTEPKNAL
Sbjct: 319 DALINILTEPKNAL 332
>gi|397905706|ref|ZP_10506548.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Caloramator
australicus RC3]
gi|397161225|emb|CCJ33883.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Caloramator
australicus RC3]
Length = 431
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 163/291 (56%), Positives = 221/291 (75%), Gaps = 21/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP PKEI + LD++V+GQ++AKK L+VAVYNHYKRI PK+ D
Sbjct: 58 DLPKPKEIKEYLDQYVVGQDEAKKALAVAVYNHYKRINA----------PKS-----RRD 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 103 DVELQKSNILLLGPTGSGKTLLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 163 QNADYDIERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVANVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + +Q+DT +ILFICGGAF ++K I +R +SIGFGA +++ V
Sbjct: 223 GRKHPHQEFLQIDTTNILFICGGAFEGIDKIIEKRLHKNSIGFGAEIKSKNERNV----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L+ + DL+ +G+IPEFVGR PI+V+L L +D L+ +LTEPKNAL
Sbjct: 278 -GEILKHILPEDLLKFGMIPEFVGRVPIVVTLNQLDKDALINILTEPKNAL 327
>gi|392307872|ref|ZP_10270406.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoalteromonas
citrea NCIMB 1889]
Length = 428
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 165/294 (56%), Positives = 219/294 (74%), Gaps = 21/294 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
+ LP PKEI LD +VIGQE AKKVLSVAVYNHYKR+ + KG
Sbjct: 64 ADKLPVPKEIRNHLDDYVIGQEHAKKVLSVAVYNHYKRLKNQGSAKG------------- 110
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 111 --DVELSKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 168
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 169 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 228
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTD 496
+G RKHP+ + +Q+DT ILFICGGAF L+K I +R +++ IGFGA V++
Sbjct: 229 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIDQRSHKNAGIGFGAQVKSE-----DS 283
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ S + VE DL+ YGLIPEF+GR P++ +LT L ED L+++L EPKNAL
Sbjct: 284 SRSLSETFKDVEPEDLVKYGLIPEFIGRLPVVATLTELDEDALIQILNEPKNAL 337
>gi|312134618|ref|YP_004001956.1| ATP-dependent clp protease, ATP-binding subunit clpx
[Caldicellulosiruptor owensensis OL]
gi|311774669|gb|ADQ04156.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Caldicellulosiruptor owensensis OL]
Length = 433
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 161/290 (55%), Positives = 222/290 (76%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI + LD++V+GQ+ AKK+LSVAVYNHYKRIY+ + KK D+
Sbjct: 61 LPTPKEIKEFLDQYVVGQDHAKKILSVAVYNHYKRIYYHDTKK---------------DD 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 106 VELQKSNILMLGPTGSGKTYLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRLIQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G++YIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 166 NADYDIERAERGIIYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF +EK I +R + ++GF A + + + D
Sbjct: 226 RKHPHQEFIQIDTTNILFICGGAFEGIEKIIEKRIGEKTLGFNAKIESKKEKKIGD---- 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L + DL+ +G+IPEF+GR PI+V+L AL ++ L+K+LTEPKNAL
Sbjct: 282 --ILRQIMPQDLLKFGMIPEFIGRVPIIVTLDALDKEALIKILTEPKNAL 329
>gi|393718796|ref|ZP_10338723.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas
echinoides ATCC 14820]
Length = 422
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 171/292 (58%), Positives = 220/292 (75%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ++AK+VLSVAV+NHYKR+ H +KG+ +
Sbjct: 64 VPTPQEICDVLDDYVIGQKRAKRVLSVAVHNHYKRLNHG--QKGA--------------D 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 168 ASDYNVERAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK I +R Q SIGFGA V + R G T
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFSGLEKIIGDRLQGKSIGFGAYVASPEERRTGET--- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L+SVE DL+ +GLIPEFVGR P++ +L L LV +LTEPKNAL
Sbjct: 285 -----LKSVEPEDLLKFGLIPEFVGRLPVIATLEDLDVPALVTILTEPKNAL 331
>gi|366053347|ref|ZP_09451069.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
suebicus KCTC 3549]
Length = 416
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 214/291 (73%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+PTP EI LD +VIGQE AKK LSVAVYNHYKR+ A +DD
Sbjct: 60 DVPTPAEIVTKLDDYVIGQEDAKKTLSVAVYNHYKRV--------------NAMTNSSDD 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+ EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DTELQKSNISLIGPTGSGKTYLAQSLAKILNVPFAIADATTLTEAGYVGEDVENIILKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 166 QSADYDVERAEKGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ++TK+ILFI GGAF +E + +R D +IGFG R D
Sbjct: 226 GRKHPQQEFIQINTKNILFIVGGAFDGIETIVKDRLGDKTIGFGTNSRE------IDQVT 279
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++L+ V DL+++GLIPEF+GR PIL +L L E LV++LTEPKNAL
Sbjct: 280 EKNVLQHVVPEDLLSFGLIPEFIGRLPILTALQKLDEHDLVRILTEPKNAL 330
>gi|16126204|ref|NP_420768.1| ATP-dependent protease ATP-binding subunit [Caulobacter crescentus
CB15]
gi|221234976|ref|YP_002517412.1| ATP-dependent protease ATP-binding subunit ClpX [Caulobacter
crescentus NA1000]
gi|239977101|sp|B8GX14.1|CLPX_CAUCN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|239977102|sp|P0CAU2.1|CLPX_CAUCR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|3688207|emb|CAA09092.1| clpX protein [Caulobacter crescentus CB15]
gi|13423422|gb|AAK23936.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Caulobacter
crescentus CB15]
gi|220964148|gb|ACL95504.1| ATP-dependent endopeptidase clp, ATP-binding subunit ClpX
[Caulobacter crescentus NA1000]
Length = 420
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 219/292 (75%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC+ LD +VIGQ AKKVL+VAV+NHYKR+ HA+ +++
Sbjct: 63 VPTPREICEVLDDYVIGQGHAKKVLAVAVHNHYKRLNHAS----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG+GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGTGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIVLKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD--AA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R SIGFGA VTD
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGAAKSIGFGAK--------VTDPEER 278
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T +L +VE DL +GLIPEF+GR P++ +L L E LVK+LTEPKNA
Sbjct: 279 RTGEILRNVEPDDLQRFGLIPEFIGRLPVVATLEDLDEAALVKILTEPKNAF 330
>gi|344996807|ref|YP_004799150.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Caldicellulosiruptor lactoaceticus 6A]
gi|343965026|gb|AEM74173.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Caldicellulosiruptor lactoaceticus 6A]
Length = 432
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 161/290 (55%), Positives = 222/290 (76%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI + LD++V+GQ+ AKK+LSVAVYNHYKRIY+ + KK D+
Sbjct: 60 LPTPKEIKEFLDQYVVGQDHAKKILSVAVYNHYKRIYYHDTKK---------------DD 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 105 VELQKSNILMLGPTGSGKTYLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRLIQ 164
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G++YIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 165 NADYDIERAERGIIYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGTIASVPPQGG 224
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF +EK I +R + ++GF A + + + D
Sbjct: 225 RKHPHQEFIQIDTTNILFICGGAFEGIEKIIEKRIGEKTLGFNAKIESKKEKKIGD---- 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L + DL+ +G+IPEF+GR PI+V+L AL ++ L+K+LTEPKNAL
Sbjct: 281 --ILRQIMPQDLLKFGMIPEFIGRVPIIVTLDALDKEALIKILTEPKNAL 328
>gi|154253669|ref|YP_001414493.1| ATP-dependent protease ATP-binding subunit ClpX [Parvibaculum
lavamentivorans DS-1]
gi|171769684|sp|A7HY53.1|CLPX_PARL1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|154157619|gb|ABS64836.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Parvibaculum
lavamentivorans DS-1]
Length = 421
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 223/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P+EIC LD +VIGQ+ AK+VLSVAV+NHYKR+ HA A +ND
Sbjct: 63 VPSPQEICGVLDDYVIGQQHAKRVLSVAVHNHYKRLNHA--------------AKNND-- 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I +R + + IGFGA V++ V D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIGQRGKGAGIGFGAKVQS-----VEDRR-T 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L+ +E DL+ +GLIPEFVGR P+L +L L E+ L+ +LT+PKNAL
Sbjct: 281 GDILKDLEPEDLLKFGLIPEFVGRMPVLATLEDLDEEALLTILTQPKNAL 330
>gi|402822002|ref|ZP_10871511.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
LH128]
gi|402264483|gb|EJU14337.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
LH128]
Length = 420
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++ +P++IC+ L+ +VIGQE+AK+VLSVAV+NHYKR+ H+ K+G
Sbjct: 63 EIVSPRDICEMLNDYVIGQERAKRVLSVAVHNHYKRLKHSG-KQG--------------- 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 DVELSKSNILLVGPTGSGKTLLAQTLARTFDVPFTMADATTLTEAGYVGEDVENIILKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+++NVE AQQG+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 167 QASDYNVEKAQQGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT +ILFICGGAF L+K I++R Q SIGFGA V D
Sbjct: 227 GRKHPQQEFLQVDTTNILFICGGAFAGLDKIIADRLQKRSIGFGAHV------ADPDKRR 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL+ E DL+ +GLIPEFVGR P++ +L L + LVK+L EPKNAL
Sbjct: 281 VGELLQKAEPEDLLKFGLIPEFVGRLPVIATLNDLDIEALVKILKEPKNAL 331
>gi|298292193|ref|YP_003694132.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Starkeya
novella DSM 506]
gi|296928704|gb|ADH89513.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Starkeya
novella DSM 506]
Length = 423
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 218/292 (74%), Gaps = 25/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AK+VLSVAV+NHYKR+ HA G +
Sbjct: 63 IPTPKEICKVLDDYVIGQFHAKRVLSVAVHNHYKRLNHATKHAG---------------D 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGF A V A + + G
Sbjct: 228 RKHPQQEFLQVDTSNILFICGGAFAGLDKIISSRGKGTSIGFSAVVAAPEDRKPG----- 282
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEF+GR P++ +L L E+ L K+L EPKNAL
Sbjct: 283 ---EVFREVEPEDLLKYGLIPEFIGRLPVIATLGDLDEEALKKILAEPKNAL 331
>gi|15677237|ref|NP_274390.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
meningitidis MC58]
gi|385341713|ref|YP_005895584.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
meningitidis M01-240149]
gi|385851038|ref|YP_005897553.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
meningitidis M04-240196]
gi|385853003|ref|YP_005899517.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
meningitidis H44/76]
gi|385857441|ref|YP_005903953.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
meningitidis NZ-05/33]
gi|416182742|ref|ZP_11612178.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M13399]
gi|416196314|ref|ZP_11618084.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis CU385]
gi|427828060|ref|ZP_18995079.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis H44/76]
gi|433465314|ref|ZP_20422796.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM422]
gi|433467513|ref|ZP_20424967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 87255]
gi|433488652|ref|ZP_20445814.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M13255]
gi|433490694|ref|ZP_20447820.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM418]
gi|433505053|ref|ZP_20461992.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 9506]
gi|433507377|ref|ZP_20464285.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 9757]
gi|433509619|ref|ZP_20466488.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 12888]
gi|433511583|ref|ZP_20468410.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 4119]
gi|21263485|sp|Q9JYY3.1|CLPX_NEIMB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|7226618|gb|AAF41746.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis MC58]
gi|316984186|gb|EFV63164.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis H44/76]
gi|325134392|gb|EGC57037.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M13399]
gi|325140408|gb|EGC62929.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis CU385]
gi|325200007|gb|ADY95462.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis H44/76]
gi|325201919|gb|ADY97373.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M01-240149]
gi|325205861|gb|ADZ01314.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M04-240196]
gi|325208330|gb|ADZ03782.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NZ-05/33]
gi|389605498|emb|CCA44415.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
meningitidis alpha522]
gi|432202347|gb|ELK58411.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 87255]
gi|432203258|gb|ELK59312.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM422]
gi|432223485|gb|ELK79266.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M13255]
gi|432227685|gb|ELK83394.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM418]
gi|432241178|gb|ELK96708.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 9506]
gi|432241742|gb|ELK97271.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 9757]
gi|432247007|gb|ELL02453.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 12888]
gi|432247631|gb|ELL03068.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 4119]
Length = 414
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 171/314 (54%), Positives = 219/314 (69%), Gaps = 26/314 (8%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+ GG G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTPSESAGGEPEESGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNAL 550
D L+ +LTEPKNAL
Sbjct: 319 DALINILTEPKNAL 332
>gi|298529125|ref|ZP_07016528.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Desulfonatronospira thiodismutans ASO3-1]
gi|298510561|gb|EFI34464.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Desulfonatronospira thiodismutans ASO3-1]
Length = 417
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 165/293 (56%), Positives = 218/293 (74%), Gaps = 21/293 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ L P E+ K LD +V+GQEK KK+L+VAVYNHYKR+ + +K
Sbjct: 59 GDTLLPPSELKKALDDYVVGQEKTKKLLAVAVYNHYKRVRYIKKQK-------------- 104
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VEL+KSN+LL+GPTGSGKTLLA+TLAR + VPF IADATTLT+AGYVGEDVE+IL +
Sbjct: 105 -DDVELDKSNILLIGPTGSGKTLLAQTLARVLKVPFAIADATTLTEAGYVGEDVENILVQ 163
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
L+ A++++EAA +G++Y+DE+DKI +K++S +I+RDVSGEGVQQALLK++EGT N+P
Sbjct: 164 LMQNADYDLEAASKGIIYVDEIDKIARKSDSPSITRDVSGEGVQQALLKIIEGTEANIPP 223
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
KG RKHP+ + I+MDT +ILFI GGAF+ ++K + ER Q S+GFGA + G
Sbjct: 224 KGGRKHPQQEFIRMDTSNILFIAGGAFIGMDKIVRERVQKGSMGFGAEL------GSQFG 277
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A + L+ +DLI YGLIPEFVGR P++ SL LTED LV++LTEPKNAL
Sbjct: 278 ATPNELISMAHPADLIKYGLIPEFVGRIPVVSSLEELTEDDLVRILTEPKNAL 330
>gi|418939669|ref|ZP_13493059.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhizobium sp.
PDO1-076]
gi|375053610|gb|EHS49999.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhizobium sp.
PDO1-076]
Length = 425
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 166/294 (56%), Positives = 224/294 (76%), Gaps = 26/294 (8%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP++I K LD++VIGQ++AKK+LSVAV+NHYKR+ HA+ KG
Sbjct: 64 EGVPTPQDIIKILDEYVIGQKQAKKILSVAVHNHYKRLSHAS--KGG------------- 108
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 109 -DVELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQSADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTD 496
G RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V + + R G
Sbjct: 228 GGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVTSPEDRRVG--- 284
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ +GLIPEF+GR P+L +L L D L+++L+EPKNAL
Sbjct: 285 -----EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDADALIQILSEPKNAL 333
>gi|300715592|ref|YP_003740395.1| ATP-dependent Clp protease ATP-binding protein ClpX [Erwinia
billingiae Eb661]
gi|299061428|emb|CAX58540.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Erwinia
billingiae Eb661]
Length = 424
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS+R + IGFGA V+ G + A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRVDTGTGIGFGATVK-----GTAEKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LLE VE DLI +GLIPEF+GR P++ +L+ L+E+ L+++L EPKNAL
Sbjct: 283 EGQLLEQVEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILREPKNAL 333
>gi|295689636|ref|YP_003593329.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Caulobacter
segnis ATCC 21756]
gi|295431539|gb|ADG10711.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Caulobacter
segnis ATCC 21756]
Length = 420
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 218/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC+ LD +VIGQ AKKVL+VAV+NHYKR+ HA+ +++
Sbjct: 63 VPTPREICEVLDDYVIGQGHAKKVLAVAVHNHYKRLNHAS----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG+GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGTGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIVLKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R SIGFGA V + T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGAAKSIGFGAKVTD------PEERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +VE DL +GLIPEF+GR P++ +L L E LVK+LTEPKNA
Sbjct: 281 GEILRNVEPDDLQRFGLIPEFIGRLPVVATLEDLDEAALVKILTEPKNAF 330
>gi|165924017|ref|ZP_02219849.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Coxiella
burnetii Q321]
gi|165916540|gb|EDR35144.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Coxiella
burnetii Q321]
Length = 422
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 169/301 (56%), Positives = 221/301 (73%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ GG+ + LPTP EI + LD++VIGQE AKKVLSVAVYNHYKR+ + K
Sbjct: 51 AQAGGAQ--KKLPTPPEIHRKLDEYVIGQEFAKKVLSVAVYNHYKRLGNQTKK------- 101
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D+VE+ KSN+LL+GPTGSGKTLLA+TLA+ ++VPF IADATTLT+AGYVGE
Sbjct: 102 ---------DSVEISKSNILLIGPTGSGKTLLAQTLAKILDVPFAIADATTLTEAGYVGE 152
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL + ++VE A+ G++YIDE+DKI +K +S +++RDVSGEGVQQALLK++E
Sbjct: 153 DVENIIQKLLQKCNYDVEKAKTGIIYIDEIDKIARKTDSPSLTRDVSGEGVQQALLKLIE 212
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ ++P +G RKHP+ + +Q+DT +ILFICGGAF DL K I R S IGF A VR
Sbjct: 213 GTVASIPPQGGRKHPQQEYLQVDTSNILFICGGAFADLHKIIQRRTDKSGIGFAAEVRP- 271
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
+ + A S L++ E DLI YGLIPEFVGR PI+ +L L ED L+++LTEPKNA
Sbjct: 272 -KEDFSREA--SKLIKQTEPGDLIKYGLIPEFVGRLPIITTLEELDEDALMRILTEPKNA 328
Query: 550 L 550
L
Sbjct: 329 L 329
>gi|119713090|gb|ABL97159.1| ATP-dependent Clp protease ATP-binding subunit ClpX [uncultured
marine bacterium EB0_49D07]
Length = 414
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 165/292 (56%), Positives = 221/292 (75%), Gaps = 23/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E+LP+P EI LD++VIGQEKAKK+LSVAVYNHYKR+ +N KK
Sbjct: 56 EELPSPLEIFNQLDEYVIGQEKAKKILSVAVYNHYKRL-RSNSKK--------------- 99
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D +EL+KSNVLL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 100 DKIELQKSNVLLLGPTGSGKTLLAQTLARVLNVPFTIADATTLTEAGYVGEDVENIIQKL 159
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++ + A G+VYIDE+DKI +K+++ +I+RDVSGEGVQQALLK++EGT+ ++P +
Sbjct: 160 LQKCDYDPDKAALGIVYIDEIDKIARKSDNPSITRDVSGEGVQQALLKLIEGTVASIPPQ 219
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + IQ+DT +ILFICGGAF +++ I R +S IGFGA V+ A
Sbjct: 220 GGRKHPQQEFIQIDTSNILFICGGAFSGIDEVIKHRTDNSGIGFGAAVKDT-------KA 272
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+S++E++E DL+ +GLIPEFVGR P++ +L L E+ LV++L EPKNAL
Sbjct: 273 TVASIVETLEPEDLVKFGLIPEFVGRLPVISTLHELDEEALVRILQEPKNAL 324
>gi|374335522|ref|YP_005092209.1| ATP-dependent protease ATP-binding subunit ClpX [Oceanimonas sp.
GK1]
gi|372985209|gb|AEY01459.1| ATP-dependent protease ATP-binding subunit ClpX [Oceanimonas sp.
GK1]
Length = 426
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 168/295 (56%), Positives = 221/295 (74%), Gaps = 24/295 (8%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ LPTP EI LD +VIGQ+ AKKVL+VAVYNHYKR+ +A +
Sbjct: 63 GDALPTPHEIRAHLDDYVIGQDHAKKVLAVAVYNHYKRLRNAT----------------S 106
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 TDGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 166
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 167 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 226
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD--SSIGFGAPVRANMRAGVT 495
+G RKHP+ + +Q+DT ILFICGGAF L+K + E+R D + IGFGA V+A
Sbjct: 227 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVV-EQRMDHGTGIGFGAEVKAR-----D 280
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A S + VE DL+ YGLIPEF+GR P++ +LT L ED LV++L+EPKNAL
Sbjct: 281 QKASLSEIFTRVEPEDLVKYGLIPEFIGRLPVVATLTELDEDALVQILSEPKNAL 335
>gi|399060627|ref|ZP_10745702.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Novosphingobium sp. AP12]
gi|398037345|gb|EJL30539.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Novosphingobium sp. AP12]
Length = 420
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++ +P+EIC+ L+ +VIGQE+AK+VLSVAV+NHYKR+ H+ K+G
Sbjct: 63 EVVSPREICETLNDYVIGQERAKRVLSVAVHNHYKRLKHSG-KQG--------------- 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLA+ +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 DVELSKSNILLVGPTGSGKTLLAQTLAKTFDVPFTMADATTLTEAGYVGEDVENIILKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+++NVE AQQG+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 167 QSSDYNVEKAQQGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT +ILFICGGAF L+K I++R Q SIGFGA V D
Sbjct: 227 GRKHPQQEFLQVDTTNILFICGGAFAGLDKIIADRLQKRSIGFGAHV------ADPDKRR 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL+ E DL+ +GLIPEFVGR P++ +L L + LVK+L EPKNAL
Sbjct: 281 VGELLQKAEPEDLLKFGLIPEFVGRLPVIATLNDLDIEALVKILKEPKNAL 331
>gi|395493606|ref|ZP_10425185.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
PAMC 26617]
gi|404253933|ref|ZP_10957901.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
PAMC 26621]
Length = 422
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 220/292 (75%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ++AK+VLSVAV+NHYKR+ H +KG+ +
Sbjct: 64 VPTPQEICDVLDDYVIGQKRAKRVLSVAVHNHYKRLNHG--QKGA--------------D 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LLMGPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLMGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 168 ASDYNVERAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF +EK I +R Q SIGFGA V + R G T
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFSGIEKIIGDRLQGKSIGFGAYVASPEERRTGET--- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L++VE DL+ +GLIPEFVGR P++ +L L LV +LTEPKNAL
Sbjct: 285 -----LKAVEPEDLLKFGLIPEFVGRLPVIATLEDLDVPALVTILTEPKNAL 331
>gi|82703456|ref|YP_413022.1| ATP-dependent protease ATP-binding subunit ClpX [Nitrosospira
multiformis ATCC 25196]
gi|123543991|sp|Q2Y6J1.1|CLPX_NITMU RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|82411521|gb|ABB75630.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Nitrosospira
multiformis ATCC 25196]
Length = 425
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 217/291 (74%), Gaps = 18/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP P EI + LD++VIGQE+AKK+LSVAVYNHYKR+ +T A + D
Sbjct: 62 DLPVPHEIRQILDQYVIGQEQAKKILSVAVYNHYKRL-------------RTLAKSADPD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 EIELAKSNILLIGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ ++ E AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QKCNYDAEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + +Q+DT +ILFICGGAF LEK I R + IGF A VR+ +
Sbjct: 229 GRKHPNQEFVQVDTTNILFICGGAFDGLEKIIRARSEKGGIGFSASVRSQ-----DNRKD 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++L VE DL+ YGLIPEFVGR P++ +L L E L+++LTEP+NAL
Sbjct: 284 FGAVLRGVEPEDLVKYGLIPEFVGRLPVVATLEELDEAALIQILTEPRNAL 334
>gi|417674454|ref|ZP_12323887.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 155-74]
gi|420345497|ref|ZP_14846929.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 965-58]
gi|332085738|gb|EGI90902.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 155-74]
gi|391276381|gb|EIQ35153.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 965-58]
Length = 424
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELSKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|268596668|ref|ZP_06130835.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
FA19]
gi|268682330|ref|ZP_06149192.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
PID332]
gi|268686798|ref|ZP_06153660.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
SK-93-1035]
gi|268550456|gb|EEZ45475.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
FA19]
gi|268622614|gb|EEZ55014.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
PID332]
gi|268627082|gb|EEZ59482.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
SK-93-1035]
Length = 414
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 174/317 (54%), Positives = 220/317 (69%), Gaps = 28/317 (8%)
Query: 235 NGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYK 294
G GG+ GG G LPTP EI LD +VIGQ +AKK L+VAVYNHYK
Sbjct: 43 EGDNGGTPPENAGGEPEESGK-----LPTPAEIVANLDDYVIGQGQAKKALAVAVYNHYK 97
Query: 295 RIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFV 354
R+ H PK D VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV
Sbjct: 98 RLRH----------PKA------DGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFV 141
Query: 355 IADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRD 414
+ADATTLT+AGYVGEDVE I+ KLL + +F+VE AQ G+VYIDE+DKI++K+++ +I+RD
Sbjct: 142 MADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQHGIVYIDEIDKISRKSDNPSITRD 201
Query: 415 VSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER 474
VSGEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R
Sbjct: 202 VSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTANILFICGGAFAGLEKVIRQR 261
Query: 475 RQDSSIGFGAPVRA-NMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTA 533
+ IGFGA V + + AG+T L VE DLI +GLIPE +GR P++ +L
Sbjct: 262 TEKGGIGFGASVHSKDENAGIT------KLFGIVEPEDLIKFGLIPELIGRLPVIATLEE 315
Query: 534 LTEDQLVKVLTEPKNAL 550
L ED L+ +LTEPKNAL
Sbjct: 316 LDEDALINILTEPKNAL 332
>gi|53802552|ref|YP_112778.1| ATP-dependent protease ATP-binding subunit ClpX [Methylococcus
capsulatus str. Bath]
gi|61211760|sp|Q60C67.1|CLPX1_METCA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX 1
gi|53756313|gb|AAU90604.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylococcus
capsulatus str. Bath]
Length = 422
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 169/302 (55%), Positives = 221/302 (73%), Gaps = 24/302 (7%)
Query: 249 GSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAE 308
GS GG E LP PKE+ LD++VIGQ+KAK++LSVAVYNHYKR+ +
Sbjct: 55 GSEAGGV---EGLPKPKEMKAILDQYVIGQDKAKRILSVAVYNHYKRLKARTFR------ 105
Query: 309 PKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVG 368
++VEL KSNVLL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVG
Sbjct: 106 ----------NDVELAKSNVLLIGPTGSGKTLLAETLARVLDVPFTIADATTLTEAGYVG 155
Query: 369 EDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 428
EDVE+I+ KLL +++VE A+QG+VYIDE+DKI++KA+S +I+RDVSGEGVQQALLK++
Sbjct: 156 EDVENIIQKLLLACDYDVEKAEQGIVYIDEIDKISRKADSPSITRDVSGEGVQQALLKLM 215
Query: 429 EGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA 488
EGT+ +VP +G RKHP+ + +Q++T +ILFICGGAF L+KTI R + S IGF A V++
Sbjct: 216 EGTVASVPPQGGRKHPQQEFLQVNTANILFICGGAFAGLDKTIRSRSERSGIGFSAEVKS 275
Query: 489 NMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKN 548
+ +L VE+ DLI YGLIPEF+GR P++ +L L E LV++L EPKN
Sbjct: 276 K-----EENTNVGEILAGVEAEDLIRYGLIPEFIGRLPVVATLEELDEAALVRILIEPKN 330
Query: 549 AL 550
AL
Sbjct: 331 AL 332
>gi|388257268|ref|ZP_10134447.1| ATP-dependent protease ATP-binding subunit ClpX [Cellvibrio sp. BR]
gi|387938435|gb|EIK44987.1| ATP-dependent protease ATP-binding subunit ClpX [Cellvibrio sp. BR]
Length = 433
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 165/294 (56%), Positives = 221/294 (75%), Gaps = 17/294 (5%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
+ E LP P EI LD++VIGQ++AKKVL+VAVYNHYKR+ + K G EP
Sbjct: 63 VSEKLPKPHEISAILDQYVIGQKRAKKVLAVAVYNHYKRLRFGD-KAGKDKEP------- 114
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+
Sbjct: 115 ----IELGKSNILLVGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQ 170
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL + +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 171 KLLQKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 230
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHP+ + +Q+DT +ILFICGGAF L+K I +R + S IGFGA V++ +
Sbjct: 231 PQGGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRDRSEKSGIGFGAEVKSK-----DE 285
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L S+E DL+ YGLIPEFVGR P++ +L L + L+++LTEP+NAL
Sbjct: 286 KRNFGETLHSLEPEDLVRYGLIPEFVGRLPVIATLDELDKAALIQILTEPRNAL 339
>gi|358639056|dbj|BAL26353.1| ATP-dependent protease ATP-binding subunit [Azoarcus sp. KH32C]
Length = 426
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 215/290 (74%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P +I LD++VIGQ++AK++L+VAVYNHYKR+ HA N +
Sbjct: 67 LPRPTQIHAILDQYVIGQDRAKRILAVAVYNHYKRLRHA---------------AANTNE 111
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 112 VELAKSNILLVGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVGEDVENIIQKLLQ 171
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VY+DE+DKI +K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 172 KCDYDVDKAQRGIVYVDEIDKIARKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 231
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT +ILFICGGAF LE+ I R + IGFGA V+ D T
Sbjct: 232 RKHPGQDFIQVDTSNILFICGGAFDGLERVIRRRHEKGGIGFGAEVK-----NAEDTRST 286
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE +DLI +GLIPEFVGR P++ +L L E LV++L EPKNAL
Sbjct: 287 GELLAGVEPADLIRFGLIPEFVGRLPVVATLAELDEAALVQILVEPKNAL 336
>gi|126668932|ref|ZP_01739873.1| ATP-dependent protease ATP-binding subunit [Marinobacter sp. ELB17]
gi|126626595|gb|EAZ97251.1| ATP-dependent protease ATP-binding subunit [Marinobacter sp. ELB17]
Length = 427
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 165/292 (56%), Positives = 224/292 (76%), Gaps = 25/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + L+++VIGQ++AK VL+VAVYNHYKR L+ G G +
Sbjct: 67 LPTPAEIRETLNEYVIGQDRAKVVLAVAVYNHYKR-----LRYGEGKA-----------D 110
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 VELGKSNILLIGPTGSGKTLLAETLARVLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 170
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 230
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV--RANMRAGVTDAA 498
RKHP+ + +Q++T +ILFICGGAF LEK I +R SSIGF A V + N+++
Sbjct: 231 RKHPQQEFLQVNTSNILFICGGAFAGLEKVIQQRSARSSIGFSAEVASKDNIKSA----- 285
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+++ V++ DL+ +GLIPEFVGR P++ +LT L ED L+++LTEPKNAL
Sbjct: 286 --GEIIKDVQTEDLVKFGLIPEFVGRLPVVATLTELDEDALIQILTEPKNAL 335
>gi|421567720|ref|ZP_16013454.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM3001]
gi|402343753|gb|EJU78899.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM3001]
Length = 414
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 172/314 (54%), Positives = 220/314 (70%), Gaps = 26/314 (8%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+S G S G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTSSESVGQTSEEPGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNAL 550
D L+ +LTEPKNAL
Sbjct: 319 DALINILTEPKNAL 332
>gi|254493894|ref|ZP_05107065.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
1291]
gi|268601527|ref|ZP_06135694.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
PID18]
gi|291043626|ref|ZP_06569342.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
DGI2]
gi|226512934|gb|EEH62279.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
1291]
gi|268585658|gb|EEZ50334.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
PID18]
gi|291012089|gb|EFE04078.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
DGI2]
Length = 414
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 174/317 (54%), Positives = 220/317 (69%), Gaps = 28/317 (8%)
Query: 235 NGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYK 294
G GG+ GG G LPTP EI LD +VIGQ +AKK L+VAVYNHYK
Sbjct: 43 EGDNGGTPPENAGGEPEESGK-----LPTPAEIVANLDDYVIGQGQAKKALAVAVYNHYK 97
Query: 295 RIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFV 354
R+ H PK D VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV
Sbjct: 98 RLRH----------PKA------DGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFV 141
Query: 355 IADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRD 414
+ADATTLT+AGYVGEDVE I+ KLL + +F+VE AQ G+VYIDE+DKI++K+++ +I+RD
Sbjct: 142 MADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQHGIVYIDEIDKISRKSDNPSITRD 201
Query: 415 VSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER 474
VSGEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R
Sbjct: 202 VSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTANILFICGGAFAGLEKVIRQR 261
Query: 475 RQDSSIGFGAPVRA-NMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTA 533
+ IGFGA V + + AG+T L VE DLI +GLIPE +GR P++ +L
Sbjct: 262 TEKGGIGFGASVHSKDENAGIT------KLFGIVEPEDLIKFGLIPELIGRLPVIATLEE 315
Query: 534 LTEDQLVKVLTEPKNAL 550
L ED L+ +LTEPKNAL
Sbjct: 316 LDEDALINILTEPKNAL 332
>gi|194098830|ref|YP_002001893.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
gonorrhoeae NCCP11945]
gi|193934120|gb|ACF29944.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
NCCP11945]
Length = 442
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 174/316 (55%), Positives = 220/316 (69%), Gaps = 28/316 (8%)
Query: 236 GGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR 295
G GG+ GG G LPTP EI LD +VIGQ +AKK L+VAVYNHYKR
Sbjct: 72 GDNGGTPPENAGGEPEESGK-----LPTPAEIVANLDDYVIGQGQAKKALAVAVYNHYKR 126
Query: 296 IYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVI 355
+ H PK D VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+
Sbjct: 127 LRH----------PKA------DGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVM 170
Query: 356 ADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDV 415
ADATTLT+AGYVGEDVE I+ KLL + +F+VE AQ G+VYIDE+DKI++K+++ +I+RDV
Sbjct: 171 ADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQHGIVYIDEIDKISRKSDNPSITRDV 230
Query: 416 SGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERR 475
SGEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R
Sbjct: 231 SGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTANILFICGGAFAGLEKVIRQRT 290
Query: 476 QDSSIGFGAPVRA-NMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTAL 534
+ IGFGA V + + AG+T L VE DLI +GLIPE +GR P++ +L L
Sbjct: 291 EKGGIGFGASVHSKDENAGIT------KLFGIVEPEDLIKFGLIPELIGRLPVIATLEEL 344
Query: 535 TEDQLVKVLTEPKNAL 550
ED L+ +LTEPKNAL
Sbjct: 345 DEDALINILTEPKNAL 360
>gi|313668518|ref|YP_004048802.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria lactamica
020-06]
gi|313005980|emb|CBN87437.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria lactamica
020-06]
Length = 414
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 213/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK DN
Sbjct: 64 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKAG------DN 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 108 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 228 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL
Sbjct: 283 TKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNAL 332
>gi|161830841|ref|YP_001596949.1| ATP-dependent protease ATP-binding subunit ClpX [Coxiella burnetii
RSA 331]
gi|189044132|sp|A9NDF9.1|CLPX_COXBR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|161762708|gb|ABX78350.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Coxiella
burnetii RSA 331]
Length = 422
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 169/301 (56%), Positives = 221/301 (73%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ GG+ + LPTP EI + LD++VIGQE AKKVLSVAVYNHYKR+ + K
Sbjct: 51 AQAGGAQ--KKLPTPPEIHRMLDEYVIGQEFAKKVLSVAVYNHYKRLGNQTKK------- 101
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D+VE+ KSN+LL+GPTGSGKTLLA+TLA+ ++VPF IADATTLT+AGYVGE
Sbjct: 102 ---------DSVEISKSNILLIGPTGSGKTLLAQTLAKILDVPFAIADATTLTEAGYVGE 152
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL + ++VE A+ G++YIDE+DKI +K +S +++RDVSGEGVQQALLK++E
Sbjct: 153 DVENIIQKLLQKCNYDVEKAKTGIIYIDEIDKIARKTDSPSLTRDVSGEGVQQALLKLIE 212
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ ++P +G RKHP+ + +Q+DT +ILFICGGAF DL K I R S IGF A VR
Sbjct: 213 GTVASIPPQGGRKHPQQEYLQVDTSNILFICGGAFADLHKIIQRRTDKSGIGFAAEVRP- 271
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
+ + A S L++ E DLI YGLIPEFVGR PI+ +L L ED L+++LTEPKNA
Sbjct: 272 -KEDFSREA--SKLIKQTEPGDLIKYGLIPEFVGRLPIITTLEELDEDALMRILTEPKNA 328
Query: 550 L 550
L
Sbjct: 329 L 329
>gi|218768389|ref|YP_002342901.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
meningitidis Z2491]
gi|433479798|ref|ZP_20437088.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 63041]
gi|433520145|ref|ZP_20476865.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 65014]
gi|433541223|ref|ZP_20497675.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 63006]
gi|21263484|sp|Q9JTX8.1|CLPX_NEIMA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|121052397|emb|CAM08729.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
meningitidis Z2491]
gi|432216137|gb|ELK72019.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 63041]
gi|432254867|gb|ELL10201.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 65014]
gi|432277236|gb|ELL32285.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 63006]
Length = 414
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 171/314 (54%), Positives = 219/314 (69%), Gaps = 26/314 (8%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+ GG G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTPSESAGGEPEESGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKARA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNAL 550
D L+ +LTEPKNAL
Sbjct: 319 DALINILTEPKNAL 332
>gi|452752507|ref|ZP_21952249.1| ATP-dependent Clp protease ATP-binding subunit ClpX [alpha
proteobacterium JLT2015]
gi|451960234|gb|EMD82648.1| ATP-dependent Clp protease ATP-binding subunit ClpX [alpha
proteobacterium JLT2015]
Length = 435
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 217/290 (74%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++IC LD +VIGQ+ AK+VLSVAV+NHYKR+ H KG+ +
Sbjct: 76 VPTPRQICDTLDDYVIGQDFAKRVLSVAVHNHYKRLAHG--AKGA--------------D 119
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKTLLA+TLA+ +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 120 IELAKSNILLIGPTGCGKTLLAQTLAKTFDVPFTMADATTLTEAGYVGEDVENIILKLLQ 179
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DK+++KA++ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 180 ASDYNVERAQRGIVYIDEIDKVSRKADNPSITRDVSGEGVQQALLKIMEGTTASVPPQGG 239
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L++ I++R Q SIGFGA V A D
Sbjct: 240 RKHPQQEFLQVDTTNILFICGGAFAGLDRIIADRLQGKSIGFGAHVAA------PDERRV 293
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ YGLIPEFVGR P+L +L L ED L+ +LTEPKNAL
Sbjct: 294 GRILREIEPEDLLKYGLIPEFVGRLPVLATLEDLDEDALITILTEPKNAL 343
>gi|416170252|ref|ZP_11608305.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis OX99.30304]
gi|325130451|gb|EGC53212.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis OX99.30304]
Length = 414
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 172/314 (54%), Positives = 220/314 (70%), Gaps = 26/314 (8%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+S G S G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTSSESVGQTSEEPGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNAL 550
D L+ +LTEPKNAL
Sbjct: 319 DALINILTEPKNAL 332
>gi|296121985|ref|YP_003629763.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Planctomyces
limnophilus DSM 3776]
gi|296014325|gb|ADG67564.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Planctomyces
limnophilus DSM 3776]
Length = 427
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 166/301 (55%), Positives = 219/301 (72%), Gaps = 23/301 (7%)
Query: 251 RWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPK 310
R G + L +PTP+EI LD++VIGQ++ K++LSVAVYNHYKR+
Sbjct: 64 RGGPTKLFNRIPTPREITTHLDEYVIGQDRTKRLLSVAVYNHYKRL-------------- 109
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
AA D D+++E+EKSN+LL+GPTGSGKTLLAKTLAR + VPF I DATTLT+AGYVGED
Sbjct: 110 -TAAADADNDIEIEKSNILLIGPTGSGKTLLAKTLARLLQVPFAIGDATTLTEAGYVGED 168
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VE++L KLL A+F++EAAQ+G+V+IDE+DKI K +++++I+RDVSGEGVQQALLKMLEG
Sbjct: 169 VENLLLKLLHAADFDIEAAQRGIVFIDEIDKIGKTSQNVSITRDVSGEGVQQALLKMLEG 228
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T+ NVP +G RKHP IQ+DT +ILFICGG FV LE I++R +IGFG
Sbjct: 229 TVANVPPQGGRKHPEQQYIQIDTSNILFICGGTFVGLEDIIAKRLGKKTIGFGG------ 282
Query: 491 RAGVTDAAVTS-SLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
+ V D S LL + D+I +G+IPE VGR P++ +L+ L E LV++L+EPKN+
Sbjct: 283 -SSVDDQKTRSGKLLAHACTDDVIEFGMIPELVGRLPVVSALSPLDEQDLVRILSEPKNS 341
Query: 550 L 550
L
Sbjct: 342 L 342
>gi|433536988|ref|ZP_20493493.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 77221]
gi|432273924|gb|ELL29021.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 77221]
Length = 414
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 172/314 (54%), Positives = 220/314 (70%), Gaps = 26/314 (8%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+S G S G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTSSESVGQTSEEPGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVICQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNAL 550
D L+ +LTEPKNAL
Sbjct: 319 DALINILTEPKNAL 332
>gi|268594953|ref|ZP_06129120.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
35/02]
gi|268599181|ref|ZP_06133348.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
MS11]
gi|268548342|gb|EEZ43760.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
35/02]
gi|268583312|gb|EEZ47988.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
MS11]
Length = 414
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 174/317 (54%), Positives = 220/317 (69%), Gaps = 28/317 (8%)
Query: 235 NGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYK 294
G GG+ GG G LPTP EI LD +VIGQ +AKK L+VAVYNHYK
Sbjct: 43 EGDNGGTPPENAGGEPEESGK-----LPTPAEIVANLDDYVIGQGQAKKALAVAVYNHYK 97
Query: 295 RIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFV 354
R+ H PK D VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV
Sbjct: 98 RLRH----------PKA------DGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFV 141
Query: 355 IADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRD 414
+ADATTLT+AGYVGEDVE I+ KLL + +F+VE AQ G+VYIDE+DKI++K+++ +I+RD
Sbjct: 142 MADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQHGIVYIDEIDKISRKSDNPSITRD 201
Query: 415 VSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER 474
VSGEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R
Sbjct: 202 VSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTANILFICGGAFAGLEKVIRQR 261
Query: 475 RQDSSIGFGAPVRA-NMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTA 533
+ IGFGA V + + AG+T L VE DLI +GLIPE +GR P++ +L
Sbjct: 262 TEKGGIGFGASVHSKDENAGIT------KLFGIVEPEDLIKFGLIPELIGRLPVIATLEE 315
Query: 534 LTEDQLVKVLTEPKNAL 550
L ED L+ +LTEPKNAL
Sbjct: 316 LDEDALINILTEPKNAL 332
>gi|416187457|ref|ZP_11614218.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M0579]
gi|325136470|gb|EGC59076.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M0579]
Length = 414
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 172/314 (54%), Positives = 220/314 (70%), Gaps = 26/314 (8%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+S G S G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTSSESVGQTSEEPGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADVTKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNAL 550
D L+ +LTEPKNAL
Sbjct: 319 DALINILTEPKNAL 332
>gi|240013975|ref|ZP_04720888.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
gonorrhoeae DGI18]
gi|240016417|ref|ZP_04722957.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
gonorrhoeae FA6140]
gi|240121542|ref|ZP_04734504.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
gonorrhoeae PID24-1]
Length = 414
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 174/317 (54%), Positives = 220/317 (69%), Gaps = 28/317 (8%)
Query: 235 NGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYK 294
G GG+ GG G LPTP EI LD +VIGQ +AKK L+VAVYNHYK
Sbjct: 43 EGDNGGTPPENAGGEPEESGK-----LPTPAEIVANLDDYVIGQGQAKKALAVAVYNHYK 97
Query: 295 RIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFV 354
R+ H PK D VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV
Sbjct: 98 RLRH----------PKA------DGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFV 141
Query: 355 IADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRD 414
+ADATTLT+AGYVGEDVE I+ KLL + +F+VE AQ G+VYIDE+DKI++K+++ +I+RD
Sbjct: 142 MADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQHGIVYIDEIDKISRKSDNPSITRD 201
Query: 415 VSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER 474
VSGEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R
Sbjct: 202 VSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTANILFICGGAFAGLEKVIRQR 261
Query: 475 RQDSSIGFGAPVRA-NMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTA 533
+ IGFGA V + + AG+T L VE DLI +GLIPE +GR P++ +L
Sbjct: 262 TEKGGIGFGASVHSKDENAGIT------KLFGIVEPEDLIKFGLIPELIGRLPVIATLEE 315
Query: 534 LTEDQLVKVLTEPKNAL 550
L ED L+ +LTEPKNAL
Sbjct: 316 LDEDALINILTEPKNAL 332
>gi|407716204|ref|YP_006837484.1| ATP-dependent Clp protease ATP-binding subunit clpX [Cycloclasticus
sp. P1]
gi|407256540|gb|AFT66981.1| ATP-dependent Clp protease ATP-binding subunit clpX [Cycloclasticus
sp. P1]
Length = 425
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 167/294 (56%), Positives = 223/294 (75%), Gaps = 22/294 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ LP P EI + LDK+VIGQ++AKK+LSV+VYNHYKR+ N KG
Sbjct: 63 GDKLPKPSEIKESLDKYVIGQQQAKKILSVSVYNHYKRL---NASKGV------------ 107
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VEL KSNVLL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 108 -DDVELAKSNVLLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQK 166
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
+L + +F+V+ AQ G+VYIDE+DKI++K+++ +++RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 167 ILQKCDFDVDKAQNGIVYIDEIDKISRKSDNPSLTRDVSGEGVQQALLKLIEGTVASVPP 226
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTD 496
+G RKHP+ + +Q+DT +ILFI GGAF L+K I +R Q + IGF A V + +
Sbjct: 227 QGGRKHPQQEFLQVDTSNILFIVGGAFAGLDKVIKDRSQKNVGIGFSAEVVSE-----NE 281
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A S +L++VE DL+ YGLIPEFVGR P++ +L L ED L+++L+EPKNAL
Sbjct: 282 APDVSDVLQNVEPEDLVKYGLIPEFVGRLPVVATLEELDEDALIQILSEPKNAL 335
>gi|385335866|ref|YP_005889813.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
gonorrhoeae TCDC-NG08107]
gi|317164409|gb|ADV07950.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 442
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 174/316 (55%), Positives = 220/316 (69%), Gaps = 28/316 (8%)
Query: 236 GGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR 295
G GG+ GG G LPTP EI LD +VIGQ +AKK L+VAVYNHYKR
Sbjct: 72 GDNGGTPPENAGGEPEESGK-----LPTPAEIVANLDDYVIGQGQAKKALAVAVYNHYKR 126
Query: 296 IYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVI 355
+ H PK D VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+
Sbjct: 127 LRH----------PKA------DGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVM 170
Query: 356 ADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDV 415
ADATTLT+AGYVGEDVE I+ KLL + +F+VE AQ G+VYIDE+DKI++K+++ +I+RDV
Sbjct: 171 ADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQHGIVYIDEIDKISRKSDNPSITRDV 230
Query: 416 SGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERR 475
SGEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R
Sbjct: 231 SGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTANILFICGGAFAGLEKVIRQRT 290
Query: 476 QDSSIGFGAPVRA-NMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTAL 534
+ IGFGA V + + AG+T L VE DLI +GLIPE +GR P++ +L L
Sbjct: 291 EKGGIGFGASVHSKDENAGIT------KLFGIVEPEDLIKFGLIPELIGRLPVIATLEEL 344
Query: 535 TEDQLVKVLTEPKNAL 550
ED L+ +LTEPKNAL
Sbjct: 345 DEDALINILTEPKNAL 360
>gi|345876363|ref|ZP_08828135.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
weaveri LMG 5135]
gi|417956978|ref|ZP_12599909.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
weaveri ATCC 51223]
gi|343966610|gb|EGV34865.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
weaveri LMG 5135]
gi|343969410|gb|EGV37624.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
weaveri ATCC 51223]
Length = 396
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 213/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + L+ VIGQE AKK L+VAVYNHYKR+ H PK+A
Sbjct: 23 LPTPAEIVENLNDHVIGQELAKKALAVAVYNHYKRLSH----------PKSAG------K 66
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 67 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 126
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 127 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 186
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + +
Sbjct: 187 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAVVSSK-----DENINI 241
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L ESVE DLI +GLIPE +GR P++ +L L E LV +LTEPKNAL
Sbjct: 242 SELFESVEPEDLIKFGLIPELIGRLPVIATLAELDEAALVNILTEPKNAL 291
>gi|406942780|gb|EKD74935.1| hypothetical protein ACD_44C00289G0001 [uncultured bacterium]
Length = 423
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 215/290 (74%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI K LD +VIGQ AKK+LSVAVYNHYKR+ H + K D+
Sbjct: 65 LPHPREIAKTLDDYVIGQTLAKKILSVAVYNHYKRLQHDSKK----------------DD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELNKSNILLIGPTGSGKTLLAETLARILNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ G+VYIDE+DKI++K++S +I+RDVSGEGVQQALLK++EGTI +VP G
Sbjct: 169 KCDYDVKKAQTGIVYIDEIDKISRKSDSPSITRDVSGEGVQQALLKLIEGTIASVPPHGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK + +R + SSIGF A V + +
Sbjct: 229 RKHPQQEFLQVDTSNILFICGGAFSGLEKIVKDRTEKSSIGFSAQVHSKH-----NKKQI 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L S+E DLI YGLIPEFVGR P++ +L L + L++VL +PKN+L
Sbjct: 284 GEVLRSLEPEDLIKYGLIPEFVGRLPVVATLDELDLNSLIQVLIQPKNSL 333
>gi|376295040|ref|YP_005166270.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Desulfovibrio
desulfuricans ND132]
gi|323457601|gb|EGB13466.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Desulfovibrio
desulfuricans ND132]
Length = 418
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/293 (56%), Positives = 221/293 (75%), Gaps = 20/293 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G LP P+EI + LD++VIGQE+AKK+LSVAV+NHYKR+++A AA
Sbjct: 59 GRLLP-PQEIKELLDQYVIGQEQAKKILSVAVHNHYKRVFYA-------------AANSG 104
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VE++KSN+LL+GPTGSGKTLLA+TLAR + VPF IADATTLT+AGYVGEDVE+IL +
Sbjct: 105 GDDVEIDKSNILLIGPTGSGKTLLAQTLARVLKVPFAIADATTLTEAGYVGEDVENILVQ 164
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL A+++++AA +G++YIDE+DK+ +K +S +I+RDVSGEGVQQALLK++EGT N+P
Sbjct: 165 LLQNADYDIDAASRGIIYIDEIDKVARKGDSPSITRDVSGEGVQQALLKIIEGTEANIPP 224
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
KG RKHP+ + I+MDT +ILFI GGAF+ L+K + +R+Q S +GFGA V A G+
Sbjct: 225 KGGRKHPQQEFIRMDTSNILFILGGAFIGLDKIVQQRKQGSGMGFGAKVEAKKEMGL--- 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L E DLI +GLIPEFVGR P+ +L LTE+ LV++LTEPKNAL
Sbjct: 282 ---GELFGMAEPMDLIKFGLIPEFVGRIPVQTALEELTEEDLVRILTEPKNAL 331
>gi|319789634|ref|YP_004151267.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermovibrio
ammonificans HB-1]
gi|317114136|gb|ADU96626.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermovibrio
ammonificans HB-1]
Length = 410
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 218/291 (74%), Gaps = 25/291 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI + LD++VIGQE+AKKVLSVAVYNHYKRI SG + D+
Sbjct: 61 LPTPKEIKEFLDQYVIGQEEAKKVLSVAVYNHYKRIM-------SGG---------SVDD 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VELEKSN+LL+GPTGSGKTLLA++LA+ ++VPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 105 VELEKSNILLIGPTGSGKTLLARSLAKLLDVPFAIADATTLTEAGYVGEDVENILLRLIQ 164
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 165 AADYDIEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVANVPPQGG 224
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV-RANMRAGVTDAAV 499
RKHP IQ+DT +ILFICGGAFV LE I+ R ++GF A V + M
Sbjct: 225 RKHPHQQYIQIDTSNILFICGGAFVGLEDIIARRIGKGAMGFTADVDKKKME-------- 276
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL+ VE DL+ +GLIPE +GR P++ +L L E+ LV+VLTEPKNAL
Sbjct: 277 RDELLKYVEPDDLVKFGLIPELIGRLPVIATLKELKEEDLVRVLTEPKNAL 327
>gi|288958757|ref|YP_003449098.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum sp.
B510]
gi|288911065|dbj|BAI72554.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum sp.
B510]
Length = 420
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/290 (56%), Positives = 219/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I LD +VIGQ AK+VLSVAV+NHYKR+ H ++
Sbjct: 63 VPTPRDIHAVLDDYVIGQSYAKRVLSVAVHNHYKRLAHGT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I++R + +SIGFGA VR+ D T
Sbjct: 227 RKHPQQEFLQVDTSNILFICGGAFAGLDKIIAQRGKGTSIGFGADVRS------ADERAT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL+ +GLIPEF+GR P+L +L+ L E LV++L++PKNAL
Sbjct: 281 GEILHEVEPEDLLKFGLIPEFIGRLPVLATLSDLDEAALVEILSKPKNAL 330
>gi|325983081|ref|YP_004295483.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Nitrosomonas
sp. AL212]
gi|325532600|gb|ADZ27321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Nitrosomonas
sp. AL212]
Length = 425
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 162/291 (55%), Positives = 220/291 (75%), Gaps = 19/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP P+EIC+ LD++VIGQE AKK+LSVAVYNHYKR+ + P++ D D
Sbjct: 62 NLPVPREICQILDQYVIGQESAKKILSVAVYNHYKRLRNI---------PRS----DETD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
++EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF++ADAT LT+AGYVGEDVE+I+ KLL
Sbjct: 109 DIELSKSNILLVGPTGSGKTLLAQTLARLLDVPFIMADATALTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ ++ E AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 169 QKCNYDAEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAMVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF L++ I R + IGFG V+++ V
Sbjct: 229 GRKHPNQEFIQVDTTNILFICGGAFDGLDRVIRARTEKGGIGFGVEVKSHSGKDV----- 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +L+ VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL
Sbjct: 284 -NKVLQQVEPEDLVKFGLIPEFVGRLPVVATLEELNEAALIQILTEPKNAL 333
>gi|254418572|ref|ZP_05032296.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
sp. BAL3]
gi|196184749|gb|EDX79725.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
sp. BAL3]
Length = 422
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 220/300 (73%), Gaps = 22/300 (7%)
Query: 251 RWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPK 310
+ G + +PTPKEI LD +VIGQ AKKVLSVAV+NHYKR+ HA
Sbjct: 53 KIGFKKTTDGVPTPKEIRDVLDDYVIGQSHAKKVLSVAVHNHYKRLNHAT---------- 102
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
+++VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGED
Sbjct: 103 ------KNNDVELAKSNIMLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGED 156
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VE+I+ KLL +++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EG
Sbjct: 157 VENIILKLLQASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEG 216
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T+ +VP +G RKHP+ + +Q+DT +ILFI GGAF LEK IS R +SIGFGA V+
Sbjct: 217 TVASVPPQGGRKHPQQEFLQVDTANILFIVGGAFAGLEKVISARGAGASIGFGAQVKE-- 274
Query: 491 RAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
D T +L+ VE DL+ +GLIPEF+GR P+L +L L E LV +LTEPKNAL
Sbjct: 275 ----IDERRTGDILKGVEPDDLMRFGLIPEFIGRLPVLATLEDLDETALVTILTEPKNAL 330
>gi|407700788|ref|YP_006825575.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Black Sea 11']
gi|407249935|gb|AFT79120.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Black Sea 11']
Length = 424
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD +VIGQE AKKVLSVAVYNHYKR+ + ++ +G
Sbjct: 65 LPKPSEIHAHLDDYVIGQEHAKKVLSVAVYNHYKRLRNGDVHEG---------------- 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R Q D+ IGFGA V++ ++
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAQKDTGIGFGATVKSK-----DNSKK 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L + VE DL+ YGLIPEF+GR P++ SL L E+ L+++L EPKNA+
Sbjct: 284 ISELFKQVEPEDLVKYGLIPEFIGRLPVVTSLEELNEEALIQILREPKNAI 334
>gi|357025388|ref|ZP_09087512.1| ATP-dependent protease ATP-binding subunit ClpX [Mesorhizobium
amorphae CCNWGS0123]
gi|355542632|gb|EHH11784.1| ATP-dependent protease ATP-binding subunit ClpX [Mesorhizobium
amorphae CCNWGS0123]
Length = 424
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/292 (56%), Positives = 220/292 (75%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI K LD +VIGQ AK+VLSVAV+NHYKR+ HA +
Sbjct: 63 EGVPTPQEILKVLDDYVIGQPYAKRVLSVAVHNHYKRLAHAG----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 NDVELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGFGA V + +
Sbjct: 227 GGRKHPQQEFLQVDTANILFICGGAFAGLDKIISDRGRKTSIGFGAIVAS------PEDR 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T + VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 281 RTGDVFRLVEPEDLLKFGLIPEFVGRLPVLATLEDLDEPALIQILTEPKNAL 332
>gi|16332067|ref|NP_442795.1| ATP-dependent protease ATP-binding subunit ClpX [Synechocystis sp.
PCC 6803]
gi|383323810|ref|YP_005384664.1| ATP-dependent protease ATPase subunit [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326979|ref|YP_005387833.1| ATP-dependent protease ATPase subunit [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383492863|ref|YP_005410540.1| ATP-dependent protease ATPase subunit [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384438131|ref|YP_005652856.1| ATP-dependent protease ATPase subunit [Synechocystis sp. PCC 6803]
gi|451816219|ref|YP_007452671.1| ATP-dependent protease ATPase subunit [Synechocystis sp. PCC 6803]
gi|6225172|sp|Q55510.1|CLPX_SYNY3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|1001376|dbj|BAA10866.1| ATP-dependent protease ATPase subunit [Synechocystis sp. PCC 6803]
gi|339275164|dbj|BAK51651.1| ATP-dependent protease ATPase subunit [Synechocystis sp. PCC 6803]
gi|359273130|dbj|BAL30649.1| ATP-dependent protease ATPase subunit [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359276300|dbj|BAL33818.1| ATP-dependent protease ATPase subunit [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359279470|dbj|BAL36987.1| ATP-dependent protease ATPase subunit [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407960293|dbj|BAM53533.1| ATP-dependent protease ATP-binding subunit ClpX [Synechocystis sp.
PCC 6803]
gi|451782188|gb|AGF53157.1| ATP-dependent protease ATPase subunit [Synechocystis sp. PCC 6803]
Length = 445
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/320 (54%), Positives = 223/320 (69%), Gaps = 18/320 (5%)
Query: 231 GSGGNGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVY 290
S G G G G R E+LP P I + LD++VIGQ++AKKVLSVAVY
Sbjct: 53 ASTGERDGTGQKQKKSGQPRRRLTL---EELPKPTAIKQYLDEYVIGQDEAKKVLSVAVY 109
Query: 291 NHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVN 350
NHYKR+ NL + + +D D VEL+KSN+LL+GPTGSGKTLLA+TLA+ +
Sbjct: 110 NHYKRL---NLLERN-------QEIDPGDAVELQKSNILLVGPTGSGKTLLAQTLAKILE 159
Query: 351 VPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLN 410
VPF +ADATTLT+AGYVGEDVE+IL +LL A+ +VE AQ+G++YIDE+DKI +K+E+ +
Sbjct: 160 VPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPS 219
Query: 411 ISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKT 470
I+RDVSGEGVQQALLKMLEGT+ NVP +G RKHP D IQ+DT +ILFICGGAFV LEK
Sbjct: 220 ITRDVSGEGVQQALLKMLEGTVANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLEKV 279
Query: 471 ISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVS 530
I +R S+GF P G + T+ +L E DL+ +GLIPEF+GR P++
Sbjct: 280 IEQRFGKKSMGFVRP-----GEGPSKEKRTADVLRQAEPDDLVKFGLIPEFIGRIPVMAC 334
Query: 531 LTALTEDQLVKVLTEPKNAL 550
L L ED L+ +LT+P+NA+
Sbjct: 335 LNPLDEDALIAILTQPRNAI 354
>gi|29654073|ref|NP_819765.1| ATP-dependent protease ATP-binding subunit ClpX [Coxiella burnetii
RSA 493]
gi|153209304|ref|ZP_01947339.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Coxiella
burnetii 'MSU Goat Q177']
gi|212212796|ref|YP_002303732.1| ATP-dependent protease ATP-binding subunit ClpX [Coxiella burnetii
CbuG_Q212]
gi|212219037|ref|YP_002305824.1| ATP-dependent protease ATP-binding subunit ClpX [Coxiella burnetii
CbuK_Q154]
gi|46576521|sp|Q83DJ1.1|CLPX_COXBU RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238066653|sp|B6J8W3.1|CLPX_COXB1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238066654|sp|B6J0V9.1|CLPX_COXB2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|29541339|gb|AAO90279.1| ATP-dependent endopeptidase clp ATP-binding subunit [Coxiella
burnetii RSA 493]
gi|120575420|gb|EAX32044.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Coxiella
burnetii 'MSU Goat Q177']
gi|212011206|gb|ACJ18587.1| ATP-dependent endopeptidase clp ATP-binding subunit [Coxiella
burnetii CbuG_Q212]
gi|212013299|gb|ACJ20679.1| ATP-dependent endopeptidase clp ATP-binding subunit [Coxiella
burnetii CbuK_Q154]
Length = 422
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 169/301 (56%), Positives = 221/301 (73%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ GG+ + LPTP EI + LD++VIGQE AKKVLSVAVYNHYKR+ + K
Sbjct: 51 AQAGGAQ--KKLPTPPEIHRMLDEYVIGQEFAKKVLSVAVYNHYKRLGNQTKK------- 101
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D+VE+ KSN+LL+GPTGSGKTLLA+TLA+ ++VPF IADATTLT+AGYVGE
Sbjct: 102 ---------DSVEISKSNILLIGPTGSGKTLLAQTLAKILDVPFAIADATTLTEAGYVGE 152
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL + ++VE A+ G++YIDE+DKI +K +S +++RDVSGEGVQQALLK++E
Sbjct: 153 DVENIIQKLLQKCNYDVEKAKTGIIYIDEIDKIARKTDSPSLTRDVSGEGVQQALLKLIE 212
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ ++P +G RKHP+ + +Q+DT +ILFICGGAF DL K I R S IGF A VR
Sbjct: 213 GTVASIPPQGGRKHPQQEYLQVDTSNILFICGGAFADLHKIIQRRTDKSGIGFAAEVRP- 271
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
+ + A S L++ E DLI YGLIPEFVGR PI+ +L L ED L+++LTEPKNA
Sbjct: 272 -KEDFSREA--SKLIKQTEPGDLIKYGLIPEFVGRLPIITTLEELDEDALMRILTEPKNA 328
Query: 550 L 550
L
Sbjct: 329 L 329
>gi|416253184|ref|ZP_11638207.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis O35E]
gi|326577945|gb|EGE27809.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis O35E]
Length = 438
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/294 (55%), Positives = 219/294 (74%), Gaps = 19/294 (6%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
L + LP PKE+ LD +VIGQ+ AKK L+VAVYNHYKR+ AN KK +
Sbjct: 82 LNKVLPKPKELRAHLDDYVIGQDVAKKALAVAVYNHYKRLKVANDKKDT----------- 130
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
D VEL KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 131 --DGVELSKSNILLIGPTGSGKTLLAQTLAKMLDVPFAMADATTLTEAGYVGEDVENIVQ 188
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL ++++V+ A++G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ N+P
Sbjct: 189 KLLQASDYDVQKAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVANIP 248
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHPR + IQ+DT +IL I GGAF L+K I +R + + IGF A V+A + +T+
Sbjct: 249 PQGGRKHPRQEMIQVDTSNILMIVGGAFAGLDKVIRQRTEKTGIGFHADVKAQDESSITE 308
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE+ DLI +GLIPE +GR P++ SL L E LV++LTEPKNAL
Sbjct: 309 ------LFREVEAEDLIKFGLIPELIGRLPVIASLEELDEAALVQILTEPKNAL 356
>gi|294678130|ref|YP_003578745.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rhodobacter
capsulatus SB 1003]
gi|294476950|gb|ADE86338.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodobacter
capsulatus SB 1003]
Length = 424
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/301 (54%), Positives = 221/301 (73%), Gaps = 23/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP++ICK LD +VIGQ AK+VLSVAV+NHYKR+ H +
Sbjct: 52 TKTTGLKATDGVPTPRDICKVLDDYVIGQMHAKRVLSVAVHNHYKRLNHGS--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 --------KQDVELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + S+IGFGA V+
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAIGFGADVKDP 274
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
G L + +E DL+ +GLIPEFVGR P++ +L L E LV +LTEPKNA
Sbjct: 275 ESRG------AGELFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDEAALVTILTEPKNA 328
Query: 550 L 550
L
Sbjct: 329 L 329
>gi|406597482|ref|YP_006748612.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii ATCC 27126]
gi|407684496|ref|YP_006799670.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'English Channel 673']
gi|407688424|ref|YP_006803597.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Balearic Sea AD45']
gi|406374803|gb|AFS38058.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii ATCC 27126]
gi|407246107|gb|AFT75293.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'English Channel 673']
gi|407291804|gb|AFT96116.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Balearic Sea AD45']
Length = 424
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD +VIGQE AKKVLSVAVYNHYKR+ + ++ +G
Sbjct: 65 LPKPSEIHAHLDDYVIGQEHAKKVLSVAVYNHYKRLRNGDVHEG---------------- 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R Q D+ IGFGA V++ ++
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAQKDTGIGFGATVKSK-----DNSKQ 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L + VE DL+ YGLIPEF+GR P++ SL L E+ L+++L EPKNA+
Sbjct: 284 ISELFKQVEPEDLVKYGLIPEFIGRLPVVTSLEELNEEALIQILREPKNAI 334
>gi|434388322|ref|YP_007098933.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Chamaesiphon
minutus PCC 6605]
gi|428019312|gb|AFY95406.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Chamaesiphon
minutus PCC 6605]
Length = 464
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/299 (55%), Positives = 221/299 (73%), Gaps = 17/299 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGA-EPKTAA-----A 314
+P P+E+ K LD+ VIGQ++AKKVLSV+VYNHYKR+ +A K A +P T A
Sbjct: 81 MPKPRELKKYLDEHVIGQDEAKKVLSVSVYNHYKRLSYAQAKSTPNATQPATGVNGVHKA 140
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
DD VEL+KSN+LL+GPTG GKT+LA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I
Sbjct: 141 NATDDGVELQKSNILLIGPTGCGKTMLAQTLAKVLDVPFAVADATTLTEAGYVGEDVENI 200
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
L +LL A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI +
Sbjct: 201 LLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIAS 260
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGF---GAPVRANMR 491
VP +G RKHP D IQ+DT +I+FICGGAFV LEK I +R S+GF G R
Sbjct: 261 VPPQGGRKHPYQDCIQIDTSNIMFICGGAFVGLEKVIEQRMGKKSMGFIQQGETPNREQR 320
Query: 492 AGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A + +++ +E DL+ YGLIPEF+GR P++ +L L E+ LV +LTEP++AL
Sbjct: 321 A--------ADMMKHLEPEDLVKYGLIPEFIGRVPVIATLNPLDENTLVSILTEPRSAL 371
>gi|331001371|ref|ZP_08324995.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Parasutterella excrementihominis YIT 11859]
gi|329568630|gb|EGG50432.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Parasutterella excrementihominis YIT 11859]
Length = 441
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/291 (55%), Positives = 216/291 (74%), Gaps = 18/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTPKEI LD++VIGQE+AKKVLSVAVYNHYKR+ + D+D+
Sbjct: 89 ELPTPKEIYANLDQYVIGQEQAKKVLSVAVYNHYKRLRSKFIGD------------DSDE 136
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VE++KSN+LL+GPTGSGKTLLA++LA+ +NVPF IADATTLT+AGYVGEDVE+++ KLL
Sbjct: 137 KVEIQKSNILLIGPTGSGKTLLAQSLAKMLNVPFAIADATTLTEAGYVGEDVENVILKLL 196
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+++ AQ G++Y+DE+DKI +K+E+ +I+RDVSGEGVQQALLK++EGT+ NVP G
Sbjct: 197 QSCNMDLKRAQMGIIYLDEIDKIARKSENPSITRDVSGEGVQQALLKLVEGTVANVPAAG 256
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+G++I +DT +ILFICGGAF L+K I R + S IGF A V+ D
Sbjct: 257 GRKHPQGNNIPVDTSNILFICGGAFEGLDKIIRRRTERSGIGFEADVKG------ADDRS 310
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E+ DL+ YGLIPE VGR P++ +L L E+ L+++LTEPKNA+
Sbjct: 311 EGEVLRDIEAKDLVRYGLIPELVGRLPVIATLDDLDEEALIRILTEPKNAV 361
>gi|416156276|ref|ZP_11604408.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 101P30B1]
gi|416220782|ref|ZP_11625591.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 103P14B1]
gi|421779132|ref|ZP_16215626.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Moraxella
catarrhalis RH4]
gi|326565912|gb|EGE16073.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 103P14B1]
gi|326575438|gb|EGE25363.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 101P30B1]
gi|407813573|gb|EKF84353.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Moraxella
catarrhalis RH4]
Length = 438
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/294 (55%), Positives = 219/294 (74%), Gaps = 19/294 (6%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
L + LP PKE+ LD +VIGQ+ AKK L+VAVYNHYKR+ AN KK +
Sbjct: 82 LNKVLPKPKELRAHLDDYVIGQDVAKKALAVAVYNHYKRLKVANDKKDT----------- 130
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
D VEL KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 131 --DGVELSKSNILLIGPTGSGKTLLAQTLAKMLDVPFAMADATTLTEAGYVGEDVENIVQ 188
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL ++++V+ A++G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ N+P
Sbjct: 189 KLLQASDYDVQKAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVANIP 248
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHPR + IQ+DT +IL I GGAF L+K I +R + + IGF A V+A + +T+
Sbjct: 249 PQGGRKHPRQEMIQVDTSNILMIVGGAFAGLDKVIRQRTEKTGIGFHADVKAQDESSITE 308
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE+ DLI +GLIPE +GR P++ SL L E LV++LTEPKNAL
Sbjct: 309 ------LFREVEAEDLIKFGLIPELIGRLPVIASLEELDEAALVQILTEPKNAL 356
>gi|196230687|ref|ZP_03129548.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Chthoniobacter flavus Ellin428]
gi|196225028|gb|EDY19537.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Chthoniobacter flavus Ellin428]
Length = 428
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 217/290 (74%), Gaps = 8/290 (2%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P EI + LD+FVIGQE+AKKVLSVAV+NHYKRI H N GSG +D +
Sbjct: 60 VPKPMEIRRQLDQFVIGQERAKKVLSVAVHNHYKRILH-NQSLGSG---NAVQQMDPLGD 115
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+EKSNVLL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ +LL
Sbjct: 116 VEIEKSNVLLIGPTGSGKTLLARTLARIIDVPFCIADATTLTEAGYVGEDVENIILRLLQ 175
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
++++V+ A+ G+VYIDE+DKI +K ++++I+RDVSGEGVQQALLK+LEGT NVP +G
Sbjct: 176 ASDYDVKRAEIGIVYIDEIDKIGRKTDNVSITRDVSGEGVQQALLKILEGTTCNVPPQGG 235
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+ T+ ILFICGGAFV LEK I +R +GFG + A V
Sbjct: 236 RKHPHQEYIQVSTEKILFICGGAFVGLEKMIQKRMGKKVLGFGVSAHEAVEAEVP----A 291
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S + E DL+++G+IPEFVGR P++ +L LTED+LV +LT+ KNA+
Sbjct: 292 SEAIRFTEPEDLLSFGMIPEFVGRLPVITALDQLTEDELVMILTDTKNAM 341
>gi|451982760|ref|ZP_21931062.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 18A]
gi|451759537|emb|CCQ83585.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 18A]
Length = 426
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/294 (56%), Positives = 217/294 (73%), Gaps = 23/294 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G LP PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ D
Sbjct: 62 GHKLPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRLNQR----------------DK 105
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D++EL KSN+L++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 KDDIELGKSNILMIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 165
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 225
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN-MRAGVTD 496
+G RKHP+ + +Q+DT++ILFICGGAF LE+ I R IGF A VR+ M V +
Sbjct: 226 QGGRKHPQQEFLQVDTRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRSQEMGKKVGE 285
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A + VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL
Sbjct: 286 A------FKEVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNAL 333
>gi|348618147|ref|ZP_08884678.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Candidatus
Glomeribacter gigasporarum BEG34]
gi|347816518|emb|CCD29367.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Candidatus
Glomeribacter gigasporarum BEG34]
Length = 422
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 215/291 (73%), Gaps = 23/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP P+EI LD++VIGQE+AKK+LSVAVYNHYKR+ H +D +
Sbjct: 65 ELPAPQEIKAFLDQYVIGQERAKKILSVAVYNHYKRLKH----------------LDRKN 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+EL KSN+LL+GPTGSGKTL A+TLAR +NVPFVI DATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 EIELAKSNILLIGPTGSGKTLFAQTLARLLNVPFVIVDATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++V AQ+G+VYIDE+DKI +K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYDVGKAQKGIVYIDEIDKIGRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I R +++ IGFGA V++ A
Sbjct: 229 GRKHPNQDFIQIDTTNILFICGGAFDGLEKVIISRTKEAGIGFGAMVKSQKHAS------ 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +LLE VE DLI +GLIPE +GR P++ L L E+ L+K+L EPKNAL
Sbjct: 283 SEALLE-VEPEDLIKFGLIPELIGRLPVVTVLDELDENALIKILVEPKNAL 332
>gi|416248952|ref|ZP_11636286.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis CO72]
gi|326576474|gb|EGE26382.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis CO72]
Length = 438
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 164/300 (54%), Positives = 221/300 (73%), Gaps = 23/300 (7%)
Query: 251 RWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPK 310
+W L + LP PKE+ LD +VIGQ+ AKK L+VAVYNHYKR+ AN KK +
Sbjct: 80 KW----LNKVLPKPKELRAHLDDYVIGQDVAKKALAVAVYNHYKRLKVANDKKDT----- 130
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
D VEL KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGED
Sbjct: 131 --------DGVELSKSNILLIGPTGSGKTLLAQTLAKMLDVPFAMADATTLTEAGYVGED 182
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VE+I+ KLL ++++V+ A++G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EG
Sbjct: 183 VENIVQKLLQASDYDVQKAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEG 242
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T+ N+P +G RKHPR + IQ+DT +IL I GGAF L+K I +R + + IGF A V+A
Sbjct: 243 TVANIPPQGGRKHPRQEMIQVDTSNILMIVGGAFAGLDKVIRQRTEKTGIGFHADVKAQD 302
Query: 491 RAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +T+ L VE+ DLI +GLIPE +GR P++ SL L E LV++LTEPKNAL
Sbjct: 303 ESSITE------LFREVEAEDLIKFGLIPELIGRLPVIASLEELDEAALVQILTEPKNAL 356
>gi|50083773|ref|YP_045283.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
ADP1]
gi|61211483|sp|Q6FEP7.1|CLPX_ACIAD RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|49529749|emb|CAG67461.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter sp.
ADP1]
Length = 436
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/291 (56%), Positives = 215/291 (73%), Gaps = 17/291 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G +
Sbjct: 59 DLPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKR-----LKAGQSGHV-------SKH 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 EVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R + IGF A V+ +
Sbjct: 227 GRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRHEKGGIGFNAEVKKK-----DETKK 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE +DL+ +GLIPEF+GR P++ +L L E L+++LTEPKNAL
Sbjct: 282 LAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEAALMQILTEPKNAL 332
>gi|302382858|ref|YP_003818681.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brevundimonas
subvibrioides ATCC 15264]
gi|302193486|gb|ADL01058.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
subvibrioides ATCC 15264]
Length = 420
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 218/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ AKKVLSVAV+NHYKR+ HA +++
Sbjct: 63 VPTPKEIREVLDDYVIGQSHAKKVLSVAVHNHYKRLNHAT----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFI GGAF LEK I+ R +SIGFGA V+ D T
Sbjct: 227 RKHPQQEFLQVDTANILFIVGGAFAGLEKVIAARGAGASIGFGAKVKE------VDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L+ VE DL+ +GLIPEF+GR P+L +L L E LV +LTEPKNAL
Sbjct: 281 GDILKGVEPDDLMRFGLIPEFIGRLPVLATLEDLDEKALVTILTEPKNAL 330
>gi|303257391|ref|ZP_07343404.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Burkholderiales bacterium 1_1_47]
gi|302859748|gb|EFL82826.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Burkholderiales bacterium 1_1_47]
Length = 441
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/291 (55%), Positives = 216/291 (74%), Gaps = 18/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTPKEI LD++VIGQE+AKKVLSVAVYNHYKR+ + D+D+
Sbjct: 89 ELPTPKEIYANLDQYVIGQEQAKKVLSVAVYNHYKRLRSKFIGD------------DSDE 136
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VE++KSN+LL+GPTGSGKTLLA++LA+ +NVPF IADATTLT+AGYVGEDVE+++ KLL
Sbjct: 137 KVEIQKSNILLIGPTGSGKTLLAQSLAKMLNVPFAIADATTLTEAGYVGEDVENVILKLL 196
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+++ AQ G++Y+DE+DKI +K+E+ +I+RDVSGEGVQQALLK++EGT+ NVP G
Sbjct: 197 QSCNMDLKRAQMGIIYLDEIDKIARKSENPSITRDVSGEGVQQALLKLVEGTVANVPAAG 256
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+G++I +DT +ILFICGGAF L+K I R + S IGF A V+ D
Sbjct: 257 GRKHPQGNNIPVDTSNILFICGGAFEGLDKIIRRRTERSGIGFEADVKG------ADDRS 310
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E+ DL+ YGLIPE VGR P++ +L L E+ L+++LTEPKNA+
Sbjct: 311 EGEVLRDIEAKDLVRYGLIPELVGRLPVIATLDDLDEEALIRILTEPKNAV 361
>gi|407802231|ref|ZP_11149073.1| ATP-dependent protease ATP-binding subunit ClpX [Alcanivorax sp.
W11-5]
gi|407023906|gb|EKE35651.1| ATP-dependent protease ATP-binding subunit ClpX [Alcanivorax sp.
W11-5]
Length = 435
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 215/291 (73%), Gaps = 14/291 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD +VIGQE+AKKVLSVAVYNHYKR+ SG +
Sbjct: 66 LPKPHEIKDTLDDYVIGQERAKKVLSVAVYNHYKRLR-------SGDSKTVKGGGKKGEE 118
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 119 IELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 178
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 179 KCDYDVERAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 238
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV- 499
RKHP+ + +Q+DT +ILFICGGAF LEK I +R + IGF A V++ D V
Sbjct: 239 RKHPQQEFLQVDTSNILFICGGAFAGLEKIIRDRSEKGGIGFSAEVKSK------DKTVN 292
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE DLI +GLIPEF+GR P++ +L L+E+ L+++LTEP+NAL
Sbjct: 293 VGQTLADVEPEDLIKFGLIPEFIGRLPVIATLEELSEEALIQILTEPRNAL 343
>gi|254805167|ref|YP_003083388.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
meningitidis alpha14]
gi|254668709|emb|CBA06486.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis alpha14]
Length = 414
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/314 (54%), Positives = 218/314 (69%), Gaps = 26/314 (8%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+ GG G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTPSESAGGEPEESGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRRRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNAL 550
D L+ +LTEPKNAL
Sbjct: 319 DALINILTEPKNAL 332
>gi|254469906|ref|ZP_05083311.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudovibrio
sp. JE062]
gi|374331791|ref|YP_005081975.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudovibrio
sp. FO-BEG1]
gi|211961741|gb|EEA96936.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudovibrio
sp. JE062]
gi|359344579|gb|AEV37953.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudovibrio
sp. FO-BEG1]
Length = 421
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 217/290 (74%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ +AKKVLSVAV+NHYKR+ HA+ +++
Sbjct: 63 IPTPQEIRGVLDDYVIGQGRAKKVLSVAVHNHYKRLNHAS----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGCGKTHLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKIT+KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKITRKAENPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGF A V A + T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISDRGRSTSIGFAASVMA------PEDRKT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L +E DL+ +GLIPEFVGR P++ +L L ED LV +L EPKNAL
Sbjct: 281 GELFAELEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVSILREPKNAL 330
>gi|422110321|ref|ZP_16380383.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309378864|emb|CBX22569.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 414
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 213/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK A N
Sbjct: 64 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKAGA------N 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 108 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 228 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL
Sbjct: 283 TKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNAL 332
>gi|359790767|ref|ZP_09293648.1| ATP-dependent protease ATP-binding subunit ClpX [Mesorhizobium
alhagi CCNWXJ12-2]
gi|359253255|gb|EHK56410.1| ATP-dependent protease ATP-binding subunit ClpX [Mesorhizobium
alhagi CCNWXJ12-2]
Length = 422
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/294 (56%), Positives = 222/294 (75%), Gaps = 26/294 (8%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI K LD +VIGQ AK+VLSVAV+NHYKR+ HA+ +
Sbjct: 63 EGVPTPQEILKVLDDYVIGQPYAKRVLSVAVHNHYKRLAHAS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 NDVELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTD 496
G RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGF A V + + R+G
Sbjct: 227 GGRKHPQQEFLQVDTANILFICGGAFAGLDKIISDRGRKTSIGFSATVASPEDRRSG--- 283
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 284 -----EVFRLVEPEDLLKFGLIPEFVGRLPVLATLEDLDEPALIQILTEPKNAL 332
>gi|239907452|ref|YP_002954193.1| ATP-dependent protease ATP-binding subunit ClpX [Desulfovibrio
magneticus RS-1]
gi|239797318|dbj|BAH76307.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Desulfovibrio
magneticus RS-1]
Length = 417
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/293 (57%), Positives = 225/293 (76%), Gaps = 21/293 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ LP P EI + LD++VIGQE+AKK+L+VAV+NHYKR+Y+A +GA
Sbjct: 59 GKLLP-PAEIKRLLDEYVIGQEQAKKILAVAVHNHYKRVYYAG---SAGA---------- 104
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VE++KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL +
Sbjct: 105 -DDVEIDKSNILLIGPTGSGKTLLAQTLARILNVPFAIADATTLTEAGYVGEDVENILVQ 163
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL A++++E+A +G++YIDE+DKI +K +S +I+RDVSGEGVQQALLK++EGT N+P
Sbjct: 164 LLQNADYDIESASKGIIYIDEIDKIARKGDSPSITRDVSGEGVQQALLKIIEGTEANIPP 223
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
KG RKHP+ + I+++T +ILFI GGAF+ L+K + +R++ S++GFGA V A +
Sbjct: 224 KGGRKHPQQEFIRLNTANILFIVGGAFIGLDKIVGQRQRGSAMGFGAKVEAKSDDDL--- 280
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S LL +DLI +GLIPEFVGR PIL SL LT+ LV++LTEPKNAL
Sbjct: 281 ---SKLLTQAHPADLIKFGLIPEFVGRIPILTSLEELTQTDLVRILTEPKNAL 330
>gi|421544664|ref|ZP_15990740.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM140]
gi|421546779|ref|ZP_15992824.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM183]
gi|421549031|ref|ZP_15995055.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM2781]
gi|421552982|ref|ZP_15998954.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM576]
gi|421561452|ref|ZP_16007299.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM2657]
gi|433469565|ref|ZP_20426986.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 98080]
gi|402323024|gb|EJU58474.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM183]
gi|402323855|gb|EJU59297.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM140]
gi|402325710|gb|EJU61119.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM2781]
gi|402330161|gb|EJU65510.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM576]
gi|402338383|gb|EJU73618.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM2657]
gi|432203835|gb|ELK59885.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 98080]
Length = 414
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 172/314 (54%), Positives = 220/314 (70%), Gaps = 26/314 (8%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+S G S G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTSSESVGQTSEEPGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNAL 550
D L+ +LTEPKNAL
Sbjct: 319 DALINILTEPKNAL 332
>gi|319784103|ref|YP_004143579.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|337269329|ref|YP_004613384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Mesorhizobium
opportunistum WSM2075]
gi|433775721|ref|YP_007306188.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Mesorhizobium australicum WSM2073]
gi|317169991|gb|ADV13529.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|336029639|gb|AEH89290.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Mesorhizobium
opportunistum WSM2075]
gi|433667736|gb|AGB46812.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Mesorhizobium australicum WSM2073]
Length = 424
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/292 (56%), Positives = 220/292 (75%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI K LD +VIGQ AK+VLSVAV+NHYKR+ HA +
Sbjct: 63 EGVPTPQEILKVLDDYVIGQPYAKRVLSVAVHNHYKRLAHAG----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 NDVELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGFGA V + +
Sbjct: 227 GGRKHPQQEFLQVDTANILFICGGAFAGLDKIISDRGRKTSIGFGAVVAS------PEDR 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T + VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL
Sbjct: 281 RTGDVFRLVEPEDLLKFGLIPEFVGRLPVLATLEDLDEPALIQILTEPKNAL 332
>gi|304316360|ref|YP_003851505.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|433654492|ref|YP_007298200.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|302777862|gb|ADL68421.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|433292681|gb|AGB18503.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 424
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 222/291 (76%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP PKEI + LD++VIGQ+KAKK L+VAVYNHYKRI ++ +K D
Sbjct: 59 ELPKPKEIKEFLDQYVIGQDKAKKALAVAVYNHYKRI-NSRVK---------------SD 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+L++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 103 DVELQKSNILMLGPTGSGKTLLAQTLARMLNVPFAIADATSLTEAGYVGEDVENILLKLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G+VYIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 163 QAADYDIEKAERGIVYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTVANVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFI GGAF +EK I R S+GFG+ V++ +
Sbjct: 223 GRKHPHQEFIQIDTTNILFIVGGAFDGIEKIIESRIGKKSLGFGSEVQSKQEKKI----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L+++ DL+ +GLIPEF+GR PI+V+L +L +D L+++LTEPKNAL
Sbjct: 278 -GEILKNIMPEDLLKFGLIPEFIGRLPIVVTLDSLDKDALIRILTEPKNAL 327
>gi|331082572|ref|ZP_08331697.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Lachnospiraceae bacterium 6_1_63FAA]
gi|330400550|gb|EGG80180.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Lachnospiraceae bacterium 6_1_63FAA]
Length = 436
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 220/291 (75%), Gaps = 23/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+L P+EI + LD++VIGQ++AKKVLSVAVYNHYKR+ SG +
Sbjct: 63 NLLKPQEIKEILDEYVIGQDEAKKVLSVAVYNHYKRVL-------SGG----------NT 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+L++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL K++
Sbjct: 106 DVELQKSNILMLGPTGSGKTLLAQTLARLLNVPFAIADATTLTEAGYVGEDVENILLKII 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E AQ G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 QAADYDIERAQYGIIYIDEIDKITRKSENASITRDVSGEGVQQALLKIVEGTVASVPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF L+K I R+ +IGF A V+ V
Sbjct: 226 GRKHPQQEFIQIDTTNILFICGGAFEGLDKIIETRKDTKAIGFNAQVQTKEEKNV----- 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL+ V DL+ +GLIPEFVGR P++VSL AL ++ LVK+LTEPKN+L
Sbjct: 281 -GELLKEVMPQDLVKFGLIPEFVGRVPVVVSLNALDKNALVKILTEPKNSL 330
>gi|254672175|emb|CBA05020.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis alpha275]
Length = 414
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 213/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK A N
Sbjct: 64 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKAGA------N 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 108 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 228 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL
Sbjct: 283 TKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNAL 332
>gi|423018591|ref|ZP_17009312.1| ATP-dependent protease ATP-binding subunit ClpX [Achromobacter
xylosoxidans AXX-A]
gi|338778353|gb|EGP42828.1| ATP-dependent protease ATP-binding subunit ClpX [Achromobacter
xylosoxidans AXX-A]
Length = 432
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 211/291 (72%), Gaps = 21/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI LD++VIGQ K++L+VAVYNHYKRI H +K D
Sbjct: 63 ELPTPAEIKTFLDQYVIGQSSPKRMLAVAVYNHYKRIRHGEIK---------------GD 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN++L+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 EVELSKSNIMLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+ ++YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVEKAQRAIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFI GGAF LEK I +R + S IGF A VRA GV +
Sbjct: 228 GRKHPNQDFVQVDTTNILFIVGGAFDGLEKVIRDRTEKSGIGFSAAVRAKSERGVGE--- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE DLI +GLIPE VGR P++ +L L E LV++LTEPKNAL
Sbjct: 285 ---LFSEVEPEDLIKFGLIPELVGRLPVVATLDELDEAALVQILTEPKNAL 332
>gi|114330231|ref|YP_746453.1| ATP-dependent protease ATP-binding subunit ClpX [Nitrosomonas
eutropha C91]
gi|122314710|sp|Q0AJI3.1|CLPX_NITEC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|114307245|gb|ABI58488.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Nitrosomonas
eutropha C91]
Length = 427
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 215/290 (74%), Gaps = 17/290 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EIC+ LD++VIGQE AKK+LSVAVYNHYKR+ NL K + D+
Sbjct: 63 LPTPHEICETLDQYVIGQESAKKILSVAVYNHYKRLR--NLSKVNAG----------SDD 110
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 IELAKSNILLIGPTGSGKTLLAQTLARLLDVPFVIADATTLTEAGYVGEDVENIIQKLLQ 170
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT VP +G
Sbjct: 171 ASNHDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTAALVPPQGG 230
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF ++K I R + S IGFGA V D
Sbjct: 231 RKHPNQEFIQVDTTNILFICGGAFDGIDKIIRARSEKSGIGFGADV-----INQNDRKEL 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +L +E DLI YGLIPEF+GR P++ +L L E L+++L EPKNAL
Sbjct: 286 NKILGDIEPEDLIKYGLIPEFIGRLPVVATLRELNEAALIQILIEPKNAL 335
>gi|425078087|ref|ZP_18481190.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|425088720|ref|ZP_18491813.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|405591066|gb|EKB64579.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|405601812|gb|EKB74965.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|381393571|ref|ZP_09919292.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
punicea DSM 14233 = ACAM 611]
gi|379330787|dbj|GAB54425.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
punicea DSM 14233 = ACAM 611]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE AKKVL+VAVYNHYKR+ + ++ +G
Sbjct: 65 LPTPSEIHAHLDDYVIGQEHAKKVLAVAVYNHYKRLKNGDVHEG---------------- 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++ E AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 KCDYDPEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERR-QDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R + S IGFGA V+A +D
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLDKIIEQRSAKGSGIGFGAEVKAQ-----SDKKN 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L + VE DL+ YGLIPEF+GR P++ SL L+ED L+++L EPKNA+
Sbjct: 284 LSELFKDVEPQDLVKYGLIPEFIGRLPVVASLEELSEDALIQILQEPKNAI 334
>gi|350270329|ref|YP_004881637.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oscillibacter
valericigenes Sjm18-20]
gi|348595171|dbj|BAK99131.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oscillibacter
valericigenes Sjm18-20]
Length = 439
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 164/298 (55%), Positives = 222/298 (74%), Gaps = 23/298 (7%)
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
G + + LPTP+EI LD++VIGQ++AK L+VAVYNHYKRIY+
Sbjct: 55 GLEEIPDKLPTPQEIKGVLDQYVIGQDEAKVALAVAVYNHYKRIYYGG------------ 102
Query: 313 AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVE 372
D++VEL+KSN+L++GPTGSGKTL A+TLAR + VPF IADATTLT+AGYVG+DVE
Sbjct: 103 -----DEDVELQKSNILMLGPTGSGKTLFAQTLARILKVPFAIADATTLTEAGYVGDDVE 157
Query: 373 SILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI 432
+IL +LL A+F+VE A++G++Y+DE+DKI +K+E+++I+RDVSGEGVQQALLK++EGT+
Sbjct: 158 NILLRLLQAADFDVERAERGIIYVDEIDKIARKSENVSITRDVSGEGVQQALLKIVEGTV 217
Query: 433 VNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA 492
NVP +G RKHP + IQ++TK+ILFICGGAF L+K I +R SIGFGA +
Sbjct: 218 ANVPPQGGRKHPHQEFIQVNTKNILFICGGAFDGLDKIIEQRVDQKSIGFGAKIE----- 272
Query: 493 GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
G D + S +L +V+ D++ YGLIPE VGR P++ +L AL+ LV++LTEPKNAL
Sbjct: 273 GKKDRDL-SRILANVQPHDILKYGLIPELVGRLPVITTLNALSRADLVRILTEPKNAL 329
>gi|336449970|ref|ZP_08620427.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Idiomarina
sp. A28L]
gi|336283127|gb|EGN76334.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Idiomarina
sp. A28L]
Length = 425
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/295 (56%), Positives = 222/295 (75%), Gaps = 24/295 (8%)
Query: 258 GED-LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
GED LPTPKEI + LD +VIGQ+ AK+VL+VAVYNHYKR+ +A +
Sbjct: 62 GEDQLPTPKEIRQHLDDYVIGQDHAKRVLAVAVYNHYKRLRNAGVH-------------- 107
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
DN+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DNIELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQ 165
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL + +++ A++G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP
Sbjct: 166 KLLQKCDYDAAKAERGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVP 225
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVT 495
+G RKHP+ + +Q+DT ILF+CGGAF LEK + +R S IGFGA ++++ +
Sbjct: 226 PQGGRKHPQQEFVQVDTSKILFVCGGAFSGLEKVVQQRLATGSGIGFGAKLKSSSDSNQV 285
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ LL VE DL+ YGLIPEF+GR P+L SLT L ED LV++L EPKNA+
Sbjct: 286 N------LLTQVEPEDLVKYGLIPEFIGRLPVLASLTELDEDALVQILGEPKNAI 334
>gi|332653035|ref|ZP_08418780.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Ruminococcaceae bacterium D16]
gi|332518181|gb|EGJ47784.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Ruminococcaceae bacterium D16]
Length = 438
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 162/296 (54%), Positives = 219/296 (73%), Gaps = 23/296 (7%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
S + + +PTP+EI LD+++IGQEKAK LSVAVYNHYKRIY GAE
Sbjct: 58 SAIPDAIPTPREIHAVLDQYIIGQEKAKVALSVAVYNHYKRIYFG------GAE------ 105
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
+VEL+KSN+LLMGPTG GKTL A+TLAR + VPF IADATTLT+AGYVG+DVE+I
Sbjct: 106 -----DVELQKSNILLMGPTGCGKTLFAQTLARVLKVPFAIADATTLTEAGYVGDDVENI 160
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
L +L+ A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ N
Sbjct: 161 LLRLVQAADYDIELAERGIIYIDEMDKIARKSENTSITRDVSGEGVQQALLKILEGTVAN 220
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP + IQ+DTK+ILFICGGAF ++K I R S+GFGA +++ V
Sbjct: 221 VPPQGGRKHPHQEFIQIDTKNILFICGGAFDGIDKIIESRLDKRSLGFGAEIQSKKERNV 280
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L++ ++ DL+ +G+IPE VGR PI+ +L +L DQ++++LTEPKNAL
Sbjct: 281 ------GELMKEIQPQDLLKFGIIPELVGRMPIITTLESLDRDQMMQILTEPKNAL 330
>gi|289449742|ref|YP_003475568.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridiales
genomosp. BVAB3 str. UPII9-5]
gi|289184289|gb|ADC90714.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridiales
genomosp. BVAB3 str. UPII9-5]
Length = 440
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/315 (53%), Positives = 226/315 (71%), Gaps = 17/315 (5%)
Query: 236 GGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR 295
G G GG++ S DLP+PKE+ LD++VIGQ++AKK L VAVYNHYKR
Sbjct: 50 GMSGKPEKSRNLGGAKAQKSVNPSDLPSPKEMKAILDEYVIGQDEAKKTLCVAVYNHYKR 109
Query: 296 IYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVI 355
++ +P++ A +D V+L+KSNV+L+GPTG GKTLLA TLA+ ++VPF I
Sbjct: 110 VFR---------DPQSETA--KEDTVQLDKSNVMLIGPTGCGKTLLASTLAKILHVPFAI 158
Query: 356 ADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDV 415
ADAT LT+AGYVGEDVE+IL +L+ A F++ AQ+G++YIDE+DKIT+++++ +I+RDV
Sbjct: 159 ADATALTEAGYVGEDVENILLRLIQNANFDIAQAQRGIIYIDEIDKITRRSDNPSITRDV 218
Query: 416 SGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERR 475
SGEGVQQALLK+LE TI NVP +G RKHP + IQ+DT +ILFICGGAF L+K I R
Sbjct: 219 SGEGVQQALLKILESTIANVPPQGGRKHPHQEFIQIDTTNILFICGGAFDGLDKIIRRRT 278
Query: 476 QDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALT 535
SIGFGA + +N + + D V S L E DL+ +GLIPEF+GR PI V+L AL
Sbjct: 279 NRKSIGFGAEIGSN--SSLDDDDVLSQL----EPRDLLKFGLIPEFIGRVPINVTLKALD 332
Query: 536 EDQLVKVLTEPKNAL 550
+ QL+KVL+EPKN+L
Sbjct: 333 QQQLIKVLSEPKNSL 347
>gi|87121307|ref|ZP_01077197.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Marinomonas
sp. MED121]
gi|86163464|gb|EAQ64739.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Marinomonas
sp. MED121]
Length = 425
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/296 (55%), Positives = 226/296 (76%), Gaps = 21/296 (7%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
S ++LP P ++ LD++VIGQEKAK+VL+VAVYNHYKR+ H + KT
Sbjct: 62 SEESDELPAPAKLKFALDEYVIGQEKAKRVLAVAVYNHYKRLKH---------QGKT--- 109
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
D VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I
Sbjct: 110 ----DGVELGKSNILLIGPTGSGKTLLAQTLARVLDVPFTIADATTLTEAGYVGEDVENI 165
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
+ KLL + +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +
Sbjct: 166 IQKLLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAS 225
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP+ + +Q+DT +ILFICGGAF L++ IS+R + SIGF A V++
Sbjct: 226 VPPQGGRKHPQQEFLQVDTSNILFICGGAFAGLDRVISDRTEKGSIGFSAVVKSK----- 280
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ V S + +VE+ DL+ +GLIPEFVGR P++ +L+ L E+ L+ +L+EPKNAL
Sbjct: 281 EEDKVFSDTVHNVETEDLVKFGLIPEFVGRLPVVATLSELDEEALITILSEPKNAL 336
>gi|407776939|ref|ZP_11124210.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
pacificus pht-3B]
gi|407301104|gb|EKF20225.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
pacificus pht-3B]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 169/292 (57%), Positives = 220/292 (75%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ AK+VLSVAV+NHYKR+ HA+ K+A
Sbjct: 63 EGVPTPQEILAVLDDYVIGQPYAKRVLSVAVHNHYKRLAHAS---------KSA------ 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 -DVELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGF A V + +
Sbjct: 227 GGRKHPQQEFLQVDTANILFICGGAFAGLDKIISDRGRKTSIGFAANVAS------PEDR 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T L VE DL+ +GLIPEFVGR PIL +L L E LV++LTEPKNAL
Sbjct: 281 QTGELFRQVEPEDLLKFGLIPEFVGRLPILATLEDLDEPALVQILTEPKNAL 332
>gi|419762102|ref|ZP_14288351.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae DSM 30104]
gi|397745020|gb|EJK92229.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae DSM 30104]
Length = 436
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 76 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 119
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 120 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 179
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 180 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 239
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 240 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 294
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 295 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 345
>gi|406947043|gb|EKD78058.1| hypothetical protein ACD_42C00061G0002 [uncultured bacterium]
Length = 380
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 159/290 (54%), Positives = 216/290 (74%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKE+ LD++V+GQ AKK+LSVAVYNHYKR+ H ++D+
Sbjct: 24 LPSPKELHTQLDQYVVGQTNAKKILSVAVYNHYKRLRHRA----------------SNDD 67
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 68 VELTKSNILLIGPTGSGKTLLAQTLARILNVPFAIADATTLTEAGYVGEDVENIVQKLLQ 127
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ ++VE A+ G++YIDE+DKI +K++S +++RDVSGEGVQQALLK++EGT+ +P +G
Sbjct: 128 KCNYDVEKAETGIIYIDEIDKIARKSDSPSLTRDVSGEGVQQALLKLIEGTVAAIPPQGG 187
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF DLEK + +R +S IGF A V+ +
Sbjct: 188 RKHPQQEYLQVDTTNILFICGGAFADLEKIVQQRTDESGIGFAASVKGKNKVS------A 241
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+++++ VE+ DLI +GLIPEFVGR P++ L L E L+ +LT+PKNAL
Sbjct: 242 NNVIKKVENQDLIKFGLIPEFVGRLPVISVLDELDESALLAILTQPKNAL 291
>gi|421557470|ref|ZP_16003375.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 80179]
gi|402335108|gb|EJU70383.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 80179]
Length = 414
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 172/314 (54%), Positives = 220/314 (70%), Gaps = 26/314 (8%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+S G S G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTSSESVGQTSEEPGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNAL 550
D L+ +LTEPKNAL
Sbjct: 319 DALINILTEPKNAL 332
>gi|15596999|ref|NP_250493.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PAO1]
gi|116049752|ref|YP_791441.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa UCBPP-PA14]
gi|152987449|ref|YP_001348853.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PA7]
gi|218892244|ref|YP_002441111.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa LESB58]
gi|254234896|ref|ZP_04928219.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa C3719]
gi|254240195|ref|ZP_04933517.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 2192]
gi|296389807|ref|ZP_06879282.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PAb1]
gi|313110499|ref|ZP_07796384.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 39016]
gi|355644078|ref|ZP_09053618.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
sp. 2_1_26]
gi|386059305|ref|YP_005975827.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa M18]
gi|386065647|ref|YP_005980951.1| ATP-dependent protease ATP-binding subunit [Pseudomonas aeruginosa
NCGM2.S1]
gi|392984725|ref|YP_006483312.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa DK2]
gi|416854316|ref|ZP_11910794.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 138244]
gi|416872416|ref|ZP_11916654.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 152504]
gi|418585583|ref|ZP_13149631.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa MPAO1/P1]
gi|418591337|ref|ZP_13155236.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa MPAO1/P2]
gi|419755332|ref|ZP_14281687.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PADK2_CF510]
gi|421154508|ref|ZP_15614013.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 14886]
gi|421161185|ref|ZP_15620151.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 25324]
gi|421168557|ref|ZP_15626633.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 700888]
gi|421175071|ref|ZP_15632768.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa CI27]
gi|421181101|ref|ZP_15638619.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa E2]
gi|421516443|ref|ZP_15963129.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PAO579]
gi|21263483|sp|Q9I2U0.1|CLPX_PSEAE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|122258863|sp|Q02KU5.1|CLPX_PSEAB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214805|sp|A6V718.1|CLPX_PSEA7 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706595|sp|B7VB75.1|CLPX_PSEA8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|9947785|gb|AAG05191.1|AE004606_5 ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PAO1]
gi|115584973|gb|ABJ10988.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa UCBPP-PA14]
gi|126166827|gb|EAZ52338.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa C3719]
gi|126193573|gb|EAZ57636.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 2192]
gi|150962607|gb|ABR84632.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
aeruginosa PA7]
gi|218772470|emb|CAW28252.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa LESB58]
gi|310882886|gb|EFQ41480.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 39016]
gi|334844151|gb|EGM22729.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 138244]
gi|334845945|gb|EGM24503.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 152504]
gi|347305611|gb|AEO75725.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa M18]
gi|348034206|dbj|BAK89566.1| ATP-dependent protease ATP-binding subunit [Pseudomonas aeruginosa
NCGM2.S1]
gi|354829406|gb|EHF13481.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
sp. 2_1_26]
gi|375044272|gb|EHS36881.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa MPAO1/P1]
gi|375049877|gb|EHS42365.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa MPAO1/P2]
gi|384398029|gb|EIE44437.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PADK2_CF510]
gi|392320230|gb|AFM65610.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa DK2]
gi|404350171|gb|EJZ76508.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PAO579]
gi|404521909|gb|EKA32463.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 14886]
gi|404529366|gb|EKA39412.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 700888]
gi|404533024|gb|EKA42877.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa CI27]
gi|404540647|gb|EKA50044.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 25324]
gi|404544329|gb|EKA53518.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa E2]
gi|453047165|gb|EME94880.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PA21_ST175]
Length = 426
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/294 (56%), Positives = 217/294 (73%), Gaps = 23/294 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G LP PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ D
Sbjct: 62 GHKLPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRLNQR----------------DK 105
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D++EL KSN+L++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 KDDIELGKSNILMIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 165
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 225
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN-MRAGVTD 496
+G RKHP+ + +Q+DT++ILFICGGAF LE+ I R IGF A VR+ M V +
Sbjct: 226 QGGRKHPQQEFLQVDTRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRSQEMGKKVGE 285
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A + VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL
Sbjct: 286 A------FKEVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNAL 333
>gi|406038260|ref|ZP_11045615.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
ursingii DSM 16037 = CIP 107286]
Length = 436
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 162/291 (55%), Positives = 220/291 (75%), Gaps = 17/291 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP P+EI K LD++VIGQ+ AKK LSVAVYNHYKR LK G +
Sbjct: 59 ELPKPQEIRKALDQYVIGQDIAKKTLSVAVYNHYKR-----LKVGQSGHKA-------NQ 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
++E+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 DIEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ ++
Sbjct: 227 GRKHPQQEFIQIDTANILFICGGAFSGLEKIVQQRQEKGGIGFTAEVKNK-----DESKK 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE +DL+ +GLIPEF+GR P++ +L L E L+++LTEPKNAL
Sbjct: 282 LAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEAALMQILTEPKNAL 332
>gi|300930259|ref|ZP_07145672.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 187-1]
gi|300461831|gb|EFK25324.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 187-1]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR PI+ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPIVATLNELSEEALIQILKEPKNAL 333
>gi|82542926|ref|YP_406873.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella boydii
Sb227]
gi|123560438|sp|Q325G3.1|CLPX_SHIBS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|81244337|gb|ABB65045.1| ATP-dependent specificity component of clpP serine protease
[Shigella boydii Sb227]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|385328638|ref|YP_005882941.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
meningitidis alpha710]
gi|308389490|gb|ADO31810.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
meningitidis alpha710]
Length = 414
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 172/314 (54%), Positives = 220/314 (70%), Gaps = 26/314 (8%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+S G S G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTSSESVGQTSEEPGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNAL 550
D L+ +LTEPKNAL
Sbjct: 319 DALINILTEPKNAL 332
>gi|304387303|ref|ZP_07369496.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
meningitidis ATCC 13091]
gi|304338686|gb|EFM04803.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
meningitidis ATCC 13091]
Length = 414
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/314 (54%), Positives = 218/314 (69%), Gaps = 26/314 (8%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+ GG G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTPSESAGGEPEESGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K ++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKGDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNAL 550
D L+ +LTEPKNAL
Sbjct: 319 DALINILTEPKNAL 332
>gi|311107152|ref|YP_003980005.1| ATP-dependent Clp protease ATP-binding subunit ClpX 1
[Achromobacter xylosoxidans A8]
gi|310761841|gb|ADP17290.1| ATP-dependent Clp protease, ATP-binding subunit ClpX 1
[Achromobacter xylosoxidans A8]
Length = 432
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 210/291 (72%), Gaps = 21/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI LD++VIGQ K++L+VAVYNHYKRI H +K D
Sbjct: 63 ELPTPAEIKTFLDQYVIGQNSPKRMLAVAVYNHYKRIRHGEIK---------------GD 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN++L+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 EVELSKSNIMLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+ ++YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVEKAQRAIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFI GGAF LEK I +R + S IGF A VRA GV
Sbjct: 228 GRKHPNQDFVQVDTTNILFIVGGAFDGLEKVIRDRTEKSGIGFSASVRAKSERGV----- 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE DLI +GLIPE VGR P++ +L L E LV++LTEPKNAL
Sbjct: 283 -GELFSEVEPEDLIKFGLIPELVGRLPVVATLDELDEAALVQILTEPKNAL 332
>gi|336249037|ref|YP_004592747.1| ATP-dependent protease ATP-binding subunit ClpX [Enterobacter
aerogenes KCTC 2190]
gi|334735093|gb|AEG97468.1| ATP-dependent protease ATP-binding subunit ClpX [Enterobacter
aerogenes KCTC 2190]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|293606139|ref|ZP_06688504.1| ATP-dependent Clp protease ATP-binding subunit [Achromobacter
piechaudii ATCC 43553]
gi|292815594|gb|EFF74710.1| ATP-dependent Clp protease ATP-binding subunit [Achromobacter
piechaudii ATCC 43553]
Length = 432
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 210/291 (72%), Gaps = 21/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI LD++VIGQ K++L+VAVYNHYKRI H +K D
Sbjct: 63 ELPTPAEIKTFLDQYVIGQNSPKRMLAVAVYNHYKRIRHGEIK---------------GD 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN++L+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 EVELSKSNIMLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+ ++YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVEKAQRAIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFI GGAF LEK I +R + S IGF A VRA GV
Sbjct: 228 GRKHPNQDFVQVDTTNILFIVGGAFDGLEKVIRDRTEKSGIGFSASVRAKSERGV----- 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE DLI +GLIPE VGR P++ +L L E LV++LTEPKNAL
Sbjct: 283 -GELFSEVEPEDLIKFGLIPELVGRLPVVATLDELDEAALVQILTEPKNAL 332
>gi|259909253|ref|YP_002649609.1| ATP-dependent protease ATP-binding subunit ClpX [Erwinia pyrifoliae
Ep1/96]
gi|385787571|ref|YP_005818680.1| ATP-dependent protease ATP-binding subunit ClpX [Erwinia sp.
Ejp617]
gi|224964875|emb|CAX56397.1| ATP-dependent specificity component of ClpP serine protease,
chaperone [Erwinia pyrifoliae Ep1/96]
gi|310766843|gb|ADP11793.1| ATP-dependent protease ATP-binding subunit ClpX [Erwinia sp.
Ejp617]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVLSVAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLSVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+T+AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELGKSNILLIGPTGSGKTLLAETMARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K +S+R S IGFGA V+ G ++ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVVSQRVDSGSGIGFGASVK-----GKSEKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +LT L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILREPKNAL 333
>gi|116492902|ref|YP_804637.1| ATP-dependent protease ATP-binding subunit ClpX [Pediococcus
pentosaceus ATCC 25745]
gi|122265634|sp|Q03F27.1|CLPX_PEDPA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|116103052|gb|ABJ68195.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pediococcus
pentosaceus ATCC 25745]
Length = 418
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 212/291 (72%), Gaps = 19/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+PTP EI L+++VIGQE+AKK LSVAVYNHYKRI K EP
Sbjct: 61 DVPTPAEIVDYLNQYVIGQEEAKKTLSVAVYNHYKRINKMAETKADEDEP---------- 110
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 111 --ELQKSNISLIGPTGSGKTFLAQSLAKILNVPFAIADATTLTEAGYVGEDVENILLKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++NVEAA++G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 169 QNADYNVEAAERGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ++T +ILFI GGAF +E + R D +IGFG +
Sbjct: 229 GRKHPQQEFIQINTTNILFIVGGAFDGIETIVKNRLGDKTIGFGTNASTTVEED------ 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL++ V DL+ +GLIPEF+GR PIL +L LTE+ LV +LTEPKNAL
Sbjct: 283 -KSLMQQVIPEDLLNFGLIPEFIGRLPILSALEKLTEEDLVHILTEPKNAL 332
>gi|424057019|ref|ZP_17794536.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
nosocomialis Ab22222]
gi|407440552|gb|EKF47069.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
nosocomialis Ab22222]
Length = 437
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 220/291 (75%), Gaps = 20/291 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG-SGAEPKTAAAVDNDD 319
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G SG K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKR-----LKVGQSGHVSK--------- 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 166 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ ++
Sbjct: 226 GRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKKK-----DESKK 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE +DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 281 IAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNAL 331
>gi|420140224|ref|ZP_14647995.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa CIG1]
gi|403246963|gb|EJY60648.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa CIG1]
Length = 427
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/294 (56%), Positives = 217/294 (73%), Gaps = 23/294 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G LP PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ D
Sbjct: 63 GHKLPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRLNQR----------------DK 106
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D++EL KSN+L++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 KDDIELGKSNILMIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 166
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 167 LLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 226
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN-MRAGVTD 496
+G RKHP+ + +Q+DT++ILFICGGAF LE+ I R IGF A VR+ M V +
Sbjct: 227 QGGRKHPQQEFLQVDTRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRSQEMGKKVGE 286
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A + VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL
Sbjct: 287 A------FKEVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNAL 334
>gi|421538319|ref|ZP_15984496.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 93003]
gi|402317138|gb|EJU52677.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 93003]
Length = 414
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 213/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK A N
Sbjct: 64 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKAGA------N 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 108 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 228 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL
Sbjct: 283 TKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNAL 332
>gi|107101234|ref|ZP_01365152.1| hypothetical protein PaerPA_01002267 [Pseudomonas aeruginosa PACS2]
Length = 426
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/294 (56%), Positives = 217/294 (73%), Gaps = 23/294 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G LP PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ D
Sbjct: 62 GHKLPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRLNQR----------------DK 105
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D++EL KSN+L++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 KDDIELGKSNILMIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 165
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 225
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN-MRAGVTD 496
+G RKHP+ + +Q+DT++ILFICGGAF LE+ I R IGF A VR+ M V +
Sbjct: 226 QGGRKHPQQEFLQVDTRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRSQEMGKKVGE 285
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A + VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL
Sbjct: 286 A------FKEVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNAL 333
>gi|85373055|ref|YP_457117.1| ATP-dependent protease ATP-binding subunit ClpX [Erythrobacter
litoralis HTCC2594]
gi|122545320|sp|Q2NDC1.1|CLPX_ERYLH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|84786138|gb|ABC62320.1| ATP-dependent Clp protease ATPase subunit [Erythrobacter litoralis
HTCC2594]
Length = 423
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 212/291 (72%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+P P EIC L+ +VIGQ++AK+VLSVAV+NHYKR+ H+ D
Sbjct: 63 DVPAPSEICATLNDYVIGQDRAKRVLSVAVHNHYKRLKHSG----------------KAD 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELAKSNILLVGPTGSGKTLLAQTLARTFDVPFTMADATTLTEAGYVGEDVENIILKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+++NV+ AQ G+VYIDE+DKIT+KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 167 QASDYNVDKAQHGIVYIDEIDKITRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT +ILFICGGAF L+K I++R Q SIGFGA V D
Sbjct: 227 GRKHPQQEFLQVDTTNILFICGGAFAGLDKIIADRLQKRSIGFGAHV------ADPDKRK 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LLE E DL+ +GLIPEFVGR P++ +L L D LV +L EPKNA+
Sbjct: 281 VGELLEKSEPEDLLKFGLIPEFVGRLPVIATLHDLDVDALVTILQEPKNAI 331
>gi|385787573|ref|YP_005818682.1| ATP-dependent protease ATP-binding subunit ClpX [Erwinia sp.
Ejp617]
gi|310766845|gb|ADP11795.1| ATP-dependent protease ATP-binding subunit ClpX [Erwinia sp.
Ejp617]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVLSVAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLSVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+T+AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELGKSNILLIGPTGSGKTLLAETMARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K +S+R S IGFGA V+ G ++ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVVSQRVDSGSGIGFGASVK-----GKSEKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +LT L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILREPKNAL 333
>gi|161870243|ref|YP_001599413.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
meningitidis 053442]
gi|189044141|sp|A9M020.1|CLPX_NEIM0 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|161595796|gb|ABX73456.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
meningitidis 053442]
Length = 414
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/314 (54%), Positives = 218/314 (69%), Gaps = 26/314 (8%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+ GG G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTPSESAGGEPEESGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K ++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKGDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNAL 550
D L+ +LTEPKNAL
Sbjct: 319 DALINILTEPKNAL 332
>gi|419840039|ref|ZP_14363437.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Haemophilus
haemolyticus HK386]
gi|386908564|gb|EIJ73256.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Haemophilus
haemolyticus HK386]
Length = 413
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/297 (56%), Positives = 216/297 (72%), Gaps = 26/297 (8%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIY--HANLKKGSGAEPKTAAAVD 316
E LPTP EI LD +VIGQ+ AKKVLSVAVYNHYKR+ H N
Sbjct: 60 EKLPTPHEIRAHLDDYVIGQDYAKKVLSVAVYNHYKRLRTNHEN---------------- 103
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
++VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE++L
Sbjct: 104 --NDVELGKSNILLIGPTGSGKTLLAQTLARRLNVPFAMADATTLTEAGYVGEDVENVLQ 161
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL E+N E A+QG++YIDE+DKI++K+E +I+RDVSGEGVQQALLK++EGT+ ++P
Sbjct: 162 KLLQNCEYNTEKAEQGIIYIDEIDKISRKSEGASITRDVSGEGVQQALLKLIEGTVASIP 221
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVT 495
+G RKHP+ + +++DT ILFICGGAF L+K IS+R Q S SIGF A V +
Sbjct: 222 PQGGRKHPQQEMVKLDTSKILFICGGAFAGLDKIISKRTQTSTSIGFSAKVEKD-----E 276
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
+ S L VE DL+ +GLIPEF+GR P++ L+ L E+ LV++LT+PKNAL +
Sbjct: 277 EEKSLSELFRQVEPDDLMKFGLIPEFIGRLPMISPLSELDEEALVQILTQPKNALTK 333
>gi|51891497|ref|YP_074188.1| ATP-dependent protease ATP-binding subunit ClpX [Symbiobacterium
thermophilum IAM 14863]
gi|61211457|sp|Q67SJ9.1|CLPX_SYMTH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|51855186|dbj|BAD39344.1| ATP-dependent Clp protease ATP-binding subunit [Symbiobacterium
thermophilum IAM 14863]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 169/292 (57%), Positives = 221/292 (75%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+D+P P EI LD++VIGQE+AK+ L+VAVYNHYKRI NL GS
Sbjct: 60 KDVPKPAEIKAILDQYVIGQERAKRTLAVAVYNHYKRI---NL--GSKL----------- 103
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL+KSN+L++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct: 104 DDVELQKSNILMLGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
+ A++++E A++G+VYIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI +VP +
Sbjct: 164 IQAADYDIEKAERGIVYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTIASVPPQ 223
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + IQ++T +ILFICGGAF ++K I+ R S +GFGA +R+ V
Sbjct: 224 GGRKHPHQEFIQINTTNILFICGGAFDGIDKIIANRVGRSGLGFGADIRSKQEQNV---- 279
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL+ + DL+ +GLIPEF+GR PI+V+L AL ED LV++L EPKNAL
Sbjct: 280 --GELLKQIMPEDLLKFGLIPEFIGRLPIVVTLDALDEDALVRILREPKNAL 329
>gi|393725065|ref|ZP_10344992.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
PAMC 26605]
Length = 422
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 220/292 (75%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ++AK+VLSVAV+NHYKR+ H +KG+ +
Sbjct: 64 VPTPQEICDVLDDYVIGQKRAKRVLSVAVHNHYKRLNHG--QKGA--------------D 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 168 ASDYNVERAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK I +R Q SIGFGA V + R G T
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFSGLEKIIGDRLQGKSIGFGAYVASPEERRTGET--- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L++VE DL+ +GLIPEFVGR P++ +L L LV +LTEPKNAL
Sbjct: 285 -----LKAVEPEDLLKFGLIPEFVGRLPVIATLEDLDVPALVTILTEPKNAL 331
>gi|157826919|ref|YP_001495983.1| ATP-dependent protease ATP-binding subunit ClpX [Rickettsia bellii
OSU 85-389]
gi|166215197|sp|A8GVR9.1|CLPX_RICB8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|157802223|gb|ABV78946.1| ATP-dependent protease ATP-binding subunit [Rickettsia bellii OSU
85-389]
Length = 427
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/301 (53%), Positives = 223/301 (74%), Gaps = 21/301 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
S+ + +PTP++IC L+ +V+GQE+AKKVL+VAVYNHYKR+ + SG
Sbjct: 49 SKIALKQITSTIPTPQKICSVLNDYVVGQEQAKKVLAVAVYNHYKRLEYVQ----SG--- 101
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+++VEL KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADAT+LT+AGYVGE
Sbjct: 102 --------NNDVELNKSNILLIGPTGSGKTLLAQTLAKILDVPFTMADATSLTEAGYVGE 153
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+IL +LL AEFNV AQ+G++YIDEVDKI +K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 154 DVENILLRLLQAAEFNVAKAQKGIIYIDEVDKIARKSENPSITRDVSGEGVQQALLKIME 213
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ D +Q+DT +ILFICGGAF+ ++ I+ R +SSIGF A V
Sbjct: 214 GTVASVPPQGGRKHPQQDFVQLDTSNILFICGGAFMGIDSIITSRTNNSSIGFAANV--- 270
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
+ + +L+S+E DL +GLIPEF+GR PI+ +L L ++ LV +LT+PKNA
Sbjct: 271 ---NIDKEKINREILKSLEIEDLTKFGLIPEFIGRLPIVTTLDDLDKEALVTILTKPKNA 327
Query: 550 L 550
+
Sbjct: 328 I 328
>gi|417842394|ref|ZP_12488485.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
haemolyticus M19501]
gi|341947266|gb|EGT73934.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
haemolyticus M19501]
Length = 413
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/295 (56%), Positives = 215/295 (72%), Gaps = 26/295 (8%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIY--HANLKKGSGAEPKTAAAVD 316
E LPTP EI LD +VIGQ+ AKKVLSVAVYNHYKR+ H N
Sbjct: 60 EKLPTPHEIRAHLDDYVIGQDYAKKVLSVAVYNHYKRLRTNHEN---------------- 103
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
++VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE++L
Sbjct: 104 --NDVELGKSNILLIGPTGSGKTLLAQTLARRLNVPFAMADATTLTEAGYVGEDVENVLQ 161
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL E+N E A+QG++YIDE+DKI++K+E +I+RDVSGEGVQQALLK++EGT+ ++P
Sbjct: 162 KLLQNCEYNTEKAEQGIIYIDEIDKISRKSEGASITRDVSGEGVQQALLKLIEGTVASIP 221
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVT 495
+G RKHP+ + +++DT ILFICGGAF L+K IS+R Q S SIGF A V +
Sbjct: 222 PQGGRKHPQQEMVKLDTSKILFICGGAFAGLDKIISKRTQTSTSIGFSAKVEKD-----E 276
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ S L VE DL+ +GLIPEF+GR P++ L+ L E+ LV++LT+PKNAL
Sbjct: 277 EEKSLSELFRQVEPDDLMKFGLIPEFIGRLPMISPLSELDEEALVQILTQPKNAL 331
>gi|342905186|ref|ZP_08726975.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
haemolyticus M21621]
gi|417839807|ref|ZP_12485974.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
haemolyticus M19107]
gi|341951682|gb|EGT78242.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
haemolyticus M19107]
gi|341951688|gb|EGT78247.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
haemolyticus M21621]
Length = 413
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/295 (56%), Positives = 215/295 (72%), Gaps = 26/295 (8%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIY--HANLKKGSGAEPKTAAAVD 316
E LPTP EI LD +VIGQ+ AKKVLSVAVYNHYKR+ H N
Sbjct: 60 EKLPTPHEIRAHLDDYVIGQDYAKKVLSVAVYNHYKRLRTNHEN---------------- 103
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
++VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE++L
Sbjct: 104 --NDVELGKSNILLIGPTGSGKTLLAQTLARRLNVPFAMADATTLTEAGYVGEDVENVLQ 161
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL E+N E A+QG++YIDE+DKI++K+E +I+RDVSGEGVQQALLK++EGT+ ++P
Sbjct: 162 KLLQNCEYNTEKAEQGIIYIDEIDKISRKSEGASITRDVSGEGVQQALLKLIEGTVASIP 221
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVT 495
+G RKHP+ + +++DT ILFICGGAF L+K IS+R Q S SIGF A V +
Sbjct: 222 PQGGRKHPQQEMVKLDTSKILFICGGAFAGLDKIISKRTQTSTSIGFSAKVEKD-----E 276
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ S L VE DL+ +GLIPEF+GR P++ L+ L E+ LV++LT+PKNAL
Sbjct: 277 EEKSLSELFRQVEPDDLMKFGLIPEFIGRLPMISPLSELDEEALVQILTQPKNAL 331
>gi|416161273|ref|ZP_11606332.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis N1568]
gi|418288531|ref|ZP_12901006.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM233]
gi|418290790|ref|ZP_12902903.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM220]
gi|421542672|ref|ZP_15988779.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM255]
gi|421559382|ref|ZP_16005256.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 92045]
gi|433473765|ref|ZP_20431126.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 97021]
gi|433482327|ref|ZP_20439586.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 2006087]
gi|433484310|ref|ZP_20441535.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 2002038]
gi|433486579|ref|ZP_20443774.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 97014]
gi|325128438|gb|EGC51319.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis N1568]
gi|372200999|gb|EHP14982.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM220]
gi|372201663|gb|EHP15556.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM233]
gi|402317502|gb|EJU53040.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM255]
gi|402335881|gb|EJU71144.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 92045]
gi|432210063|gb|ELK66029.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 97021]
gi|432215577|gb|ELK71464.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 2006087]
gi|432220408|gb|ELK76229.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 2002038]
gi|432221864|gb|ELK77668.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 97014]
Length = 414
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/314 (54%), Positives = 219/314 (69%), Gaps = 26/314 (8%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+ GG G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTPSESAGGEPEESGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNAL 550
D L+ +LTEPKNAL
Sbjct: 319 DALINILTEPKNAL 332
>gi|422320059|ref|ZP_16401127.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Achromobacter
xylosoxidans C54]
gi|317405212|gb|EFV85551.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Achromobacter
xylosoxidans C54]
Length = 432
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 211/291 (72%), Gaps = 21/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI LD++VIGQ K++L+VAVYNHYKRI H +K D
Sbjct: 63 ELPTPAEIKTFLDQYVIGQTSPKRMLAVAVYNHYKRIRHGEIK---------------GD 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN++L+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 EVELSKSNIMLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+ ++YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVEKAQRAIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFI GGAF LEK I +R + S IGF A VRA GV +
Sbjct: 228 GRKHPNQDFVQVDTTNILFIVGGAFDGLEKVIRDRTEKSGIGFSASVRAKSERGVGE--- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE DLI +GLIPE VGR P++ +L L E LV++LTEPKNAL
Sbjct: 285 ---LFSEVEPEDLIKFGLIPELVGRLPVVATLDELDEAALVQILTEPKNAL 332
>gi|422023826|ref|ZP_16370328.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
sneebia DSM 19967]
gi|414091841|gb|EKT53522.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
sneebia DSM 19967]
Length = 363
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 220/291 (75%), Gaps = 21/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + LD +VIGQE+AKKVL+VAVYNHYKR+ + + +
Sbjct: 64 LPTPHEIREHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGD---------------TTSEG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS+R S IGF A V+ G ++ A
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRLNTHSGIGFAAEVK-----GESEKAT 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+LL E DLI +GLIPEF+GR P++ +LT L+E+ L+++L EPKNAL
Sbjct: 284 EGALLAQAEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILKEPKNAL 334
>gi|334141357|ref|YP_004534563.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Novosphingobium sp. PP1Y]
gi|359397993|ref|ZP_09191017.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Novosphingobium pentaromativorans US6-1]
gi|333939387|emb|CCA92745.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Novosphingobium sp. PP1Y]
gi|357600411|gb|EHJ62106.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Novosphingobium pentaromativorans US6-1]
Length = 420
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 222/306 (72%), Gaps = 28/306 (9%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G + GG +P+P+EIC+ L+ +VIGQ++AK+VLSVAV+NHYKR+ H+ K+G
Sbjct: 54 AGIAGKKDGG------VPSPREICETLNDYVIGQDRAKRVLSVAVHNHYKRLKHSG-KQG 106
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+VEL KSN+LL+GPTGSGKTLLA+TLA+ +VPF +ADATTLT+A
Sbjct: 107 ---------------DVELSKSNILLVGPTGSGKTLLAQTLAKTFDVPFTMADATTLTEA 151
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL +++NVE AQ G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQAL
Sbjct: 152 GYVGEDVENIILKLLQASDYNVEKAQHGIVYIDEIDKISRKAENPSITRDVSGEGVQQAL 211
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I++R Q SIGFGA
Sbjct: 212 LKLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIADRLQKRSIGFGA 271
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V D LL+ E DL+ +GLIPEFVGR P++ +L L LVK+L
Sbjct: 272 HV------ADPDKRRVGELLQKSEPEDLLKFGLIPEFVGRLPVIATLEDLDIAALVKILK 325
Query: 545 EPKNAL 550
EPKNAL
Sbjct: 326 EPKNAL 331
>gi|445437356|ref|ZP_21441002.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC021]
gi|444753938|gb|ELW78574.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC021]
Length = 437
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 220/291 (75%), Gaps = 20/291 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG-SGAEPKTAAAVDNDD 319
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G SG K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKR-----LKVGQSGHVSK--------- 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 166 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ ++
Sbjct: 226 GRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKKK-----DESKK 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE +DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 281 IAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNAL 331
>gi|417846494|ref|ZP_12492496.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
haemolyticus M21639]
gi|341952171|gb|EGT78708.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
haemolyticus M21639]
Length = 413
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/295 (56%), Positives = 215/295 (72%), Gaps = 26/295 (8%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIY--HANLKKGSGAEPKTAAAVD 316
E LPTP EI LD +VIGQ+ AKKVLSVAVYNHYKR+ H N
Sbjct: 60 EKLPTPHEIRAHLDDYVIGQDYAKKVLSVAVYNHYKRLRTNHEN---------------- 103
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
++VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE++L
Sbjct: 104 --NDVELGKSNILLIGPTGSGKTLLAQTLARRLNVPFAMADATTLTEAGYVGEDVENVLQ 161
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL E+N E A+QG++YIDE+DKI++K+E +I+RDVSGEGVQQALLK++EGT+ ++P
Sbjct: 162 KLLQNCEYNTEKAEQGIIYIDEIDKISRKSEGASITRDVSGEGVQQALLKLIEGTVASIP 221
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVT 495
+G RKHP+ + +++DT ILFICGGAF L+K IS+R Q S SIGF A V +
Sbjct: 222 PQGGRKHPQQEMVKLDTSKILFICGGAFAGLDKIISKRTQTSTSIGFSAKVEKD-----K 276
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ S L VE DL+ +GLIPEF+GR P++ L+ L E+ LV++LT+PKNAL
Sbjct: 277 EEKSLSELFRQVEPDDLMKFGLIPEFIGRLPMISPLSELDEEALVQILTQPKNAL 331
>gi|170767649|ref|ZP_02902102.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
albertii TW07627]
gi|170123137|gb|EDS92068.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
albertii TW07627]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|90961621|ref|YP_535537.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
salivarius UCC118]
gi|227890708|ref|ZP_04008513.1| ATP-dependent protease ATP-binding subunit [Lactobacillus
salivarius ATCC 11741]
gi|417788215|ref|ZP_12435898.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
salivarius NIAS840]
gi|417810391|ref|ZP_12457070.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
salivarius GJ-24]
gi|122449131|sp|Q1WU81.1|CLPX_LACS1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|90820815|gb|ABD99454.1| ATP-dependent clp protease ATP-binding subunit [Lactobacillus
salivarius UCC118]
gi|227867646|gb|EEJ75067.1| ATP-dependent protease ATP-binding subunit [Lactobacillus
salivarius ATCC 11741]
gi|334308392|gb|EGL99378.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
salivarius NIAS840]
gi|335349187|gb|EGM50687.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
salivarius GJ-24]
Length = 408
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/291 (56%), Positives = 214/291 (73%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++PTP EI L+++V+GQE+AKK L+VAVYNHYKR+ A++ +DD
Sbjct: 60 NVPTPHEIVDTLNQYVVGQEEAKKTLAVAVYNHYKRV---------------NASLSDDD 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
EL+KSN+ L+GPTGSGKT LA+ LAR +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 105 GTELQKSNICLVGPTGSGKTFLAQNLARILNVPFAIADATTLTEAGYVGEDVENILLKLL 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE AQ+G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 165 QNADYDVERAQRGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFI GGAF +E + R D +IGFG +
Sbjct: 225 GRKHPQQEFIQIDTTNILFIVGGAFDGIETMVKNRLGDKTIGFGVDSKQEYDPD------ 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL++ + DL+ +GLIPEF+GR PIL +L LTE+ LV++LTEPKNAL
Sbjct: 279 -KSLMQQIIPEDLLKFGLIPEFIGRLPILTALEKLTEEDLVRILTEPKNAL 328
>gi|416203630|ref|ZP_11620109.1| ATP-dependent Clp protease, ATP-binding subunit ClpX, partial
[Neisseria meningitidis 961-5945]
gi|325142574|gb|EGC64970.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 961-5945]
Length = 341
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 212/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK A N
Sbjct: 64 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKAGA------N 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 108 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K ++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 KCDFDVEKAQRGIVYIDEIDKISRKGDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 228 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL
Sbjct: 283 TKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNAL 332
>gi|297616503|ref|YP_003701662.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Syntrophothermus lipocalidus DSM 12680]
gi|297144340|gb|ADI01097.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Syntrophothermus lipocalidus DSM 12680]
Length = 417
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+P P+EI LD++VIGQEKAKK+L+VAVYNHYKRI NL G+ D
Sbjct: 61 DIPKPQEIKDILDQYVIGQEKAKKILAVAVYNHYKRI---NL--GTKL-----------D 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+L++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 105 DVELQKSNILMLGPTGSGKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVENILLKLI 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G+VYIDE+DKI +K ++ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 165 QAADYDIEKAEKGIVYIDEIDKIARKTDNPSITRDVSGEGVQQALLKILEGTIASVPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF ++K I R S+GFGA ++ +
Sbjct: 225 GRKHPHQEFIQIDTSNILFICGGAFEGIDKIIQNRVGQKSMGFGADIKTKKEKKI----- 279
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+LE + DL+ +GLIPEFVGR PI+V+L AL E LV++LTEPKNAL
Sbjct: 280 -GEILEQILPQDLLKFGLIPEFVGRVPIIVTLDALDESALVRILTEPKNAL 329
>gi|188534633|ref|YP_001908430.1| ATP-dependent protease ATP-binding subunit ClpX [Erwinia
tasmaniensis Et1/99]
gi|188029675|emb|CAO97554.1| ATP-dependent specificity component of ClpP serine protease,
chaperone [Erwinia tasmaniensis Et1/99]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVLSVAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLSVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+T+AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELGKSNILLIGPTGSGKTLLAETMARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K +S+R S IGFGA V+ G ++ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVVSQRVDSGSGIGFGASVK-----GKSEKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +LT L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILREPKNAL 333
>gi|443316647|ref|ZP_21046083.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Leptolyngbya
sp. PCC 6406]
gi|442783733|gb|ELR93637.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Leptolyngbya
sp. PCC 6406]
Length = 445
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/294 (56%), Positives = 214/294 (72%), Gaps = 22/294 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P+EI K LD+ VIGQ+ AKKVLSVAVYNHYKR+ H + G D+
Sbjct: 79 IPKPREIKKHLDEHVIGQDDAKKVLSVAVYNHYKRLSHLQNRGNEGG----------DEP 128
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL+K+N+LL+GPTG GKTLLA+TLA+ + VPF +ADATTLT+AGYVGEDVE+IL +LL
Sbjct: 129 IELQKANILLIGPTGCGKTLLAQTLAKILEVPFAVADATTLTEAGYVGEDVENILLRLLQ 188
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +G
Sbjct: 189 VADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQGG 248
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP----VRANMRAGVTD 496
RKHP D IQ+DT +ILFICGGAFV LEK + +R SIGF P V + RA
Sbjct: 249 RKHPYQDCIQIDTSNILFICGGAFVGLEKMVEQRTGKKSIGFVQPGDSQVSRDKRA---- 304
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +L+ +E DL+ YG+IPEF+GR P L + L E+ LV +LTEPKNAL
Sbjct: 305 ----ADILKDLEPEDLVKYGMIPEFIGRIPALSVVDPLDEEALVAILTEPKNAL 354
>gi|385840311|ref|YP_005863635.1| ATP-dependent Clp protease ATP-binding subunit clpX [Lactobacillus
salivarius CECT 5713]
gi|300214432|gb|ADJ78848.1| ATP-dependent Clp protease ATP-binding subunit clpX [Lactobacillus
salivarius CECT 5713]
Length = 408
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/291 (56%), Positives = 214/291 (73%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++PTP EI L+++V+GQE+AKK L+VAVYNHYKR+ A++ +DD
Sbjct: 60 NVPTPHEIVDTLNQYVVGQEEAKKTLAVAVYNHYKRV---------------NASLSDDD 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
EL+KSN+ L+GPTGSGKT LA+ LAR +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 105 GTELQKSNICLVGPTGSGKTFLAQNLARILNVPFAIADATTLTEAGYVGEDVENILLKLL 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE AQ+G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 165 QNADYDVERAQRGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFI GGAF +E + R D +IGFG +
Sbjct: 225 GRKHPQQEFIQIDTTNILFIVGGAFDGIETMVKNRLGDKTIGFGVDSKQEYDPD------ 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL++ + DL+ +GLIPEF+GR PIL +L LTE+ LV++LTEPKNAL
Sbjct: 279 -KSLMQQIIPEDLLKFGLIPEFIGRLPILTALEKLTEEDLVRILTEPKNAL 328
>gi|152968973|ref|YP_001334082.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|238893387|ref|YP_002918121.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|330011534|ref|ZP_08307120.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. MS 92-3]
gi|365138465|ref|ZP_09345149.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella sp.
4_1_44FAA]
gi|378977300|ref|YP_005225441.1| ATP-dependent protease ATP-binding subunit [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|386033453|ref|YP_005953366.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae KCTC 2242]
gi|402782115|ref|YP_006637661.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|419973311|ref|ZP_14488736.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|419978495|ref|ZP_14493791.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|419983881|ref|ZP_14499030.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|419989933|ref|ZP_14504907.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|419995812|ref|ZP_14510617.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|420000723|ref|ZP_14515381.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|420007651|ref|ZP_14522144.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|420013284|ref|ZP_14527595.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|420018369|ref|ZP_14532566.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|420024460|ref|ZP_14538473.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|420030218|ref|ZP_14544045.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|420035321|ref|ZP_14548985.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|420041655|ref|ZP_14555151.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|420047716|ref|ZP_14561032.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|420053418|ref|ZP_14566596.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|420058262|ref|ZP_14571275.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|420064550|ref|ZP_14577359.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|420070363|ref|ZP_14583015.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|420076106|ref|ZP_14588579.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|420084375|ref|ZP_14596635.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|421908673|ref|ZP_16338508.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421918683|ref|ZP_16348198.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|424829258|ref|ZP_18253986.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
gi|424934795|ref|ZP_18353167.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|425080159|ref|ZP_18483256.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|425090281|ref|ZP_18493366.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|428149079|ref|ZP_18996911.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428933609|ref|ZP_19007157.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae JHCK1]
gi|428939230|ref|ZP_19012343.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae VA360]
gi|449060066|ref|ZP_21737738.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae hvKP1]
gi|166214780|sp|A6T5I1.1|CLPX_KLEP7 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|150953822|gb|ABR75852.1| ATP-dependent protease ATP-binding subunit [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|238545703|dbj|BAH62054.1| ATP-dependent protease ATP-binding subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|328534151|gb|EGF60786.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. MS 92-3]
gi|339760581|gb|AEJ96801.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae KCTC 2242]
gi|363654925|gb|EHL93798.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella sp.
4_1_44FAA]
gi|364516711|gb|AEW59839.1| ATP-dependent protease ATP-binding subunit [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|397348783|gb|EJJ41881.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|397351566|gb|EJJ44649.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|397354932|gb|EJJ47958.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|397366796|gb|EJJ59411.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|397368454|gb|EJJ61060.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|397372938|gb|EJJ65410.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|397380233|gb|EJJ72418.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|397384352|gb|EJJ76472.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|397390326|gb|EJJ82236.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|397399075|gb|EJJ90732.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|397402039|gb|EJJ93651.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|397408057|gb|EJJ99433.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|397416556|gb|EJK07729.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|397418192|gb|EJK09351.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|397424203|gb|EJK15110.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|397433256|gb|EJK23906.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|397437303|gb|EJK27872.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|397441745|gb|EJK32111.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|397447617|gb|EJK37807.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|397450261|gb|EJK40371.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|402542977|gb|AFQ67126.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|405607084|gb|EKB80054.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|405613965|gb|EKB86686.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|407808982|gb|EKF80233.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|410117464|emb|CCM81133.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410118950|emb|CCM90823.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|414706677|emb|CCN28381.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
gi|426304301|gb|EKV66448.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae VA360]
gi|426304863|gb|EKV66997.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae JHCK1]
gi|427540936|emb|CCM93049.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|448874274|gb|EMB09329.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae hvKP1]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|206579207|ref|YP_002240082.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae 342]
gi|288936833|ref|YP_003440892.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
variicola At-22]
gi|290510111|ref|ZP_06549481.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. 1_1_55]
gi|238066657|sp|B5Y0U1.1|CLPX_KLEP3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|206568265|gb|ACI10041.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
pneumoniae 342]
gi|288891542|gb|ADC59860.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
variicola At-22]
gi|289776827|gb|EFD84825.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. 1_1_55]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|156935009|ref|YP_001438925.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii ATCC BAA-894]
gi|389841945|ref|YP_006344029.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii ES15]
gi|417791994|ref|ZP_12439406.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii E899]
gi|424798414|ref|ZP_18223956.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 696]
gi|429089533|ref|ZP_19152265.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
universalis NCTC 9529]
gi|429092458|ref|ZP_19155086.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
dublinensis 1210]
gi|429107668|ref|ZP_19169537.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
malonaticus 681]
gi|429109246|ref|ZP_19171016.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
malonaticus 507]
gi|429114394|ref|ZP_19175312.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 701]
gi|429122486|ref|ZP_19183063.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 680]
gi|449309235|ref|YP_007441591.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii SP291]
gi|166214776|sp|A7MFI7.1|CLPX_ENTS8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|156533263|gb|ABU78089.1| hypothetical protein ESA_02860 [Cronobacter sakazakii ATCC BAA-894]
gi|333953882|gb|EGL71772.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii E899]
gi|387852421|gb|AFK00519.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii ES15]
gi|423234135|emb|CCK05826.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 696]
gi|426294391|emb|CCJ95650.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
malonaticus 681]
gi|426310403|emb|CCJ97129.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
malonaticus 507]
gi|426317523|emb|CCK01425.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 701]
gi|426322954|emb|CCK13800.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 680]
gi|426509336|emb|CCK17377.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
universalis NCTC 9529]
gi|426742657|emb|CCJ81199.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
dublinensis 1210]
gi|449099268|gb|AGE87302.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii SP291]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 217/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQEKAKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRSHLDDYVIGQEKAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+ G + A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVK-----GKSQKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+ED L+++L EPKNAL
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEDALIQILKEPKNAL 333
>gi|410462599|ref|ZP_11316167.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Desulfovibrio magneticus str. Maddingley MBC34]
gi|409984259|gb|EKO40580.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Desulfovibrio magneticus str. Maddingley MBC34]
Length = 410
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/293 (57%), Positives = 225/293 (76%), Gaps = 21/293 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ LP P EI + LD++VIGQE+AKK+L+VAV+NHYKR+Y+A +GA
Sbjct: 52 GKLLP-PAEIKRLLDEYVIGQEQAKKILAVAVHNHYKRVYYAG---SAGA---------- 97
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VE++KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL +
Sbjct: 98 -DDVEIDKSNILLIGPTGSGKTLLAQTLARILNVPFAIADATTLTEAGYVGEDVENILVQ 156
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL A++++E+A +G++YIDE+DKI +K +S +I+RDVSGEGVQQALLK++EGT N+P
Sbjct: 157 LLQNADYDIESASKGIIYIDEIDKIARKGDSPSITRDVSGEGVQQALLKIIEGTEANIPP 216
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
KG RKHP+ + I+++T +ILFI GGAF+ L+K + +R++ S++GFGA V A +
Sbjct: 217 KGGRKHPQQEFIRLNTANILFIVGGAFIGLDKIVGQRQRGSAMGFGAKVEAKSDDDL--- 273
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S LL +DLI +GLIPEFVGR PIL SL LT+ LV++LTEPKNAL
Sbjct: 274 ---SKLLTQAHPADLIKFGLIPEFVGRIPILTSLEELTQTDLVRILTEPKNAL 323
>gi|421484310|ref|ZP_15931881.1| ATP-dependent protease ATP-binding subunit ClpX [Achromobacter
piechaudii HLE]
gi|400197519|gb|EJO30484.1| ATP-dependent protease ATP-binding subunit ClpX [Achromobacter
piechaudii HLE]
Length = 432
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 210/291 (72%), Gaps = 21/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI LD++VIGQ K++L+VAVYNHYKRI H +K D
Sbjct: 63 ELPTPAEIKTFLDQYVIGQNSPKRMLAVAVYNHYKRIRHGEIK---------------GD 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN++L+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 EVELSKSNIMLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+ ++YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVEKAQRAIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFI GGAF LEK I +R + S IGF A VRA GV
Sbjct: 228 GRKHPNQDFVQVDTTNILFIVGGAFDGLEKVIRDRTEKSGIGFSASVRAKSERGV----- 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE DLI +GLIPE VGR P++ +L L E LV++LTEPKNAL
Sbjct: 283 -GELFSEVEPEDLIKFGLIPELVGRLPVVATLDELDEAALVQILTEPKNAL 332
>gi|383317430|ref|YP_005378272.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Frateuria
aurantia DSM 6220]
gi|379044534|gb|AFC86590.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Frateuria
aurantia DSM 6220]
Length = 430
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 213/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI LD++V+GQ +AKK L+VAVYNHYKRI + D
Sbjct: 66 LPKPREIMDALDQYVVGQTRAKKSLAVAVYNHYKRI----------------ESRQKSDE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQSGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTLASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DTK+ILFI GGAF L+K I +R + + IGF A VR+ R
Sbjct: 230 RKHPQQEFLQVDTKNILFIVGGAFAGLDKVIQQRAETTGIGFSAEVRSKER-----TTNL 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DL+ YGLIPEFVGR P++ +L L E LVK+LTEPKNA+
Sbjct: 285 GRLLADVEPGDLVRYGLIPEFVGRLPVIATLDELDEAALVKILTEPKNAV 334
>gi|237730415|ref|ZP_04560896.1| ATP-dependent Clp protease ATP-binding subunit clpX [Citrobacter
sp. 30_2]
gi|283834243|ref|ZP_06353984.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Citrobacter
youngae ATCC 29220]
gi|365104950|ref|ZP_09334342.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Citrobacter
freundii 4_7_47CFAA]
gi|395228095|ref|ZP_10406419.1| ATP-dependent Clp protease ATP-binding subunit clpX [Citrobacter
sp. A1]
gi|421843722|ref|ZP_16276882.1| ATP-dependent protease ATP-binding subunit ClpX [Citrobacter
freundii ATCC 8090 = MTCC 1658]
gi|424730592|ref|ZP_18159187.1| atp-dependent clp protease atp-binding subunit [Citrobacter sp.
L17]
gi|226905954|gb|EEH91872.1| ATP-dependent Clp protease ATP-binding subunit clpX [Citrobacter
sp. 30_2]
gi|291069763|gb|EFE07872.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Citrobacter
youngae ATCC 29220]
gi|363643891|gb|EHL83195.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Citrobacter
freundii 4_7_47CFAA]
gi|394718217|gb|EJF23854.1| ATP-dependent Clp protease ATP-binding subunit clpX [Citrobacter
sp. A1]
gi|411775443|gb|EKS58889.1| ATP-dependent protease ATP-binding subunit ClpX [Citrobacter
freundii ATCC 8090 = MTCC 1658]
gi|422894785|gb|EKU34592.1| atp-dependent clp protease atp-binding subunit [Citrobacter sp.
L17]
gi|455641802|gb|EMF20973.1| ATP-dependent protease ATP-binding subunit ClpX [Citrobacter
freundii GTC 09479]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAQ-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L+ L+E+ L+++L EPKNAL
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILKEPKNAL 333
>gi|373467006|ref|ZP_09558312.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Haemophilus
sp. oral taxon 851 str. F0397]
gi|371759512|gb|EHO48239.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Haemophilus
sp. oral taxon 851 str. F0397]
Length = 413
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/295 (56%), Positives = 215/295 (72%), Gaps = 26/295 (8%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIY--HANLKKGSGAEPKTAAAVD 316
E LPTP EI LD +VIGQ+ AKKVLSVAVYNHYKR+ H N
Sbjct: 60 EKLPTPHEIRAHLDDYVIGQDYAKKVLSVAVYNHYKRLRTNHEN---------------- 103
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
++VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE++L
Sbjct: 104 --NDVELGKSNILLIGPTGSGKTLLAQTLARRLNVPFAMADATTLTEAGYVGEDVENVLQ 161
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL E+N E A+QG++YIDE+DKI++K+E +I+RDVSGEGVQQALLK++EGT+ ++P
Sbjct: 162 KLLQNCEYNTEKAEQGIIYIDEIDKISRKSEGASITRDVSGEGVQQALLKLIEGTVASIP 221
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVT 495
+G RKHP+ + +++DT ILFICGGAF L+K IS+R Q S SIGF A V +
Sbjct: 222 PQGGRKHPQQEMVKLDTSKILFICGGAFAGLDKIISKRTQTSTSIGFSAKVEKD-----E 276
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ S L VE DL+ +GLIPEF+GR P++ L+ L E+ LV++LT+PKNAL
Sbjct: 277 EEKSLSELFRQVEPDDLMKFGLIPEFIGRLPMISPLSELDEEALVQILTQPKNAL 331
>gi|390449293|ref|ZP_10234902.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
aquibiodomus RA22]
gi|389664398|gb|EIM75893.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
aquibiodomus RA22]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/292 (56%), Positives = 220/292 (75%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI + LD +VIGQ AK+VLSVAV+NHYKR+ HA+ +
Sbjct: 63 EGVPTPQEIIEVLDDYVIGQGHAKRVLSVAVHNHYKRLAHAS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 ADVELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS+R + +SIGFGA V + +
Sbjct: 227 GGRKHPQQEFLQVDTANILFICGGAFAGLDRIISDRGRKTSIGFGATVAS------PEDR 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T L VE DL+ +GLIPEFVGR P+L +L L E LV++L+EPKNAL
Sbjct: 281 PTGELFRQVEPEDLLKFGLIPEFVGRLPVLATLEDLDEAALVQILSEPKNAL 332
>gi|421894267|ref|ZP_16324757.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pediococcus
pentosaceus IE-3]
gi|385272811|emb|CCG90129.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pediococcus
pentosaceus IE-3]
Length = 418
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 212/291 (72%), Gaps = 19/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+PTP EI L+++VIGQE+AKK LSVAVYNHYKRI K EP
Sbjct: 61 DVPTPAEIVDYLNQYVIGQEEAKKTLSVAVYNHYKRINKMAETKADEDEP---------- 110
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 111 --ELQKSNISLIGPTGSGKTFLAQSLAKILNVPFAIADATTLTEAGYVGEDVENILLKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++NVEAA++G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 169 QNADYNVEAAERGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ++T +ILFI GGAF +E + R D +IGFG +
Sbjct: 229 GRKHPQQEFIQINTTNILFIVGGAFDGIETIVKNRLGDKTIGFGTNASTTVEED------ 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL++ V DL+ +GLIPEF+GR PIL +L LTE+ LV +LTEPKNAL
Sbjct: 283 -KSLMQQVIPEDLLNFGLIPEFIGRLPILSALEKLTEEDLVHILTEPKNAL 332
>gi|416273476|ref|ZP_11643391.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
dysenteriae CDC 74-1112]
gi|420378676|ref|ZP_14878175.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 225-75]
gi|320173742|gb|EFW48925.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
dysenteriae CDC 74-1112]
gi|391306909|gb|EIQ64657.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 225-75]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|315122829|ref|YP_004063318.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313496231|gb|ADR52830.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 162/292 (55%), Positives = 223/292 (76%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP++I + LD++VIGQ +AKKVL+VAV+NHYKR+ H++ +
Sbjct: 63 EGVPTPQDILQVLDEYVIGQGQAKKVLAVAVHNHYKRLAHSS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SSVELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGF A V+ +D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKASIGFSAVVKN------SDDR 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L ++ES DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL
Sbjct: 281 PVGEVLRNIESEDLVKFGLIPEFIGRLPVLATLEDLDEDSLIRILSEPKNAL 332
>gi|262042474|ref|ZP_06015633.1| ATP-dependent Clp protease [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259040178|gb|EEW41290.1| ATP-dependent Clp protease [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|121635078|ref|YP_975323.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
meningitidis FAM18]
gi|416177865|ref|ZP_11610234.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M6190]
gi|416191846|ref|ZP_11616274.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis ES14902]
gi|416215261|ref|ZP_11623296.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M01-240013]
gi|421554971|ref|ZP_16000910.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 98008]
gi|421565524|ref|ZP_16011297.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM3081]
gi|433492765|ref|ZP_20449858.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM586]
gi|433494899|ref|ZP_20451967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM762]
gi|433497065|ref|ZP_20454103.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M7089]
gi|433499127|ref|ZP_20456136.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M7124]
gi|433501103|ref|ZP_20458089.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM174]
gi|433503309|ref|ZP_20460270.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM126]
gi|166214793|sp|A1KUJ4.1|CLPX_NEIMF RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120866784|emb|CAM10537.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
meningitidis FAM18]
gi|325132435|gb|EGC55128.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M6190]
gi|325138423|gb|EGC60991.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis ES14902]
gi|325143447|gb|EGC65773.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M01-240013]
gi|402332124|gb|EJU67455.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 98008]
gi|402343959|gb|EJU79101.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM3081]
gi|432228551|gb|ELK84251.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM586]
gi|432230102|gb|ELK85781.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM762]
gi|432233558|gb|ELK89185.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M7089]
gi|432234961|gb|ELK90581.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M7124]
gi|432236394|gb|ELK92003.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM174]
gi|432240074|gb|ELK95618.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM126]
Length = 414
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/314 (54%), Positives = 218/314 (69%), Gaps = 26/314 (8%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+ GG G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTPSESAGGEPEESGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K ++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKGDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNAL 550
D L+ +LTEPKNAL
Sbjct: 319 DALINILTEPKNAL 332
>gi|424941030|ref|ZP_18356793.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
aeruginosa NCMG1179]
gi|346057476|dbj|GAA17359.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
aeruginosa NCMG1179]
Length = 436
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/294 (56%), Positives = 217/294 (73%), Gaps = 23/294 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G LP PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ D
Sbjct: 72 GHKLPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRLNQR----------------DK 115
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D++EL KSN+L++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 116 KDDIELGKSNILMIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 175
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 176 LLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 235
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN-MRAGVTD 496
+G RKHP+ + +Q+DT++ILFICGGAF LE+ I R IGF A VR+ M V +
Sbjct: 236 QGGRKHPQQEFLQVDTRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRSQEMGKKVGE 295
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A + VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL
Sbjct: 296 A------FKEVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNAL 343
>gi|366160316|ref|ZP_09460178.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia sp.
TW09308]
gi|432371212|ref|ZP_19614276.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE11]
gi|430900425|gb|ELC22444.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE11]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|456063264|ref|YP_007502234.1| ATP-dependent protease ATP-binding subunit [beta proteobacterium
CB]
gi|455440561|gb|AGG33499.1| ATP-dependent protease ATP-binding subunit [beta proteobacterium
CB]
Length = 453
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/306 (56%), Positives = 223/306 (72%), Gaps = 19/306 (6%)
Query: 258 GED-LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANL-------KKGSGAEP 309
GED LPTP +I + LD++VIGQ+ AKK L+VAVYNHYKR+ + K G EP
Sbjct: 61 GEDSLPTPHQIRENLDQYVIGQDHAKKTLAVAVYNHYKRLQYLPKPKKEKLDKDGKPVEP 120
Query: 310 --KTAAAVDND---DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
K + V D VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+A
Sbjct: 121 ADKKESKVPAKAMVDGVELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEA 180
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL ++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQAL
Sbjct: 181 GYVGEDVENIIQKLLQACDYNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 240
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I +R + IGF A
Sbjct: 241 LKLVEGTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKVIQQRTAKTGIGFNA 300
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V GV+D LL VE DLI +GLIPE +GR P++ +L L E L+++LT
Sbjct: 301 TVPGKDDRGVSD------LLIEVEPEDLIKFGLIPELIGRLPVVATLAQLDETALIQILT 354
Query: 545 EPKNAL 550
EPKNAL
Sbjct: 355 EPKNAL 360
>gi|206890826|ref|YP_002248105.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|254763870|sp|B5YI39.1|CLPX_THEYD RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|206742764|gb|ACI21821.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 409
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/294 (55%), Positives = 221/294 (75%), Gaps = 27/294 (9%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
+ +DLPTP+EI K L+ +VIGQE+AKK+LSVAVYNHYKRI+ KG+ ++
Sbjct: 55 IKQDLPTPQEIHKFLNDYVIGQERAKKILSVAVYNHYKRIF-----KGTSSD-------- 101
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
E++KSN++L+GPTG+GKTLLA+TLA+ ++VPF IADATTLT+AGYVGEDVE+IL
Sbjct: 102 -----EIQKSNIMLIGPTGTGKTLLAQTLAKFLDVPFAIADATTLTEAGYVGEDVENILL 156
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL A F+++ AQ G++YIDE+DKI++K++S +I+RDVSGEGVQQALLK++EGT+ N+P
Sbjct: 157 KLLQNANFDIQRAQIGIIYIDEIDKISRKSDSPSITRDVSGEGVQQALLKIVEGTLANIP 216
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHP+ + IQ+DT +ILFICGGAFV LE+ I +R +IGF + T
Sbjct: 217 PQGGRKHPQQEYIQLDTTNILFICGGAFVGLEEIIKKRIGKRTIGFLSE---------TK 267
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++L E DLI YG+IPEFVGRFP++ +L L ED L+++LT+PKNAL
Sbjct: 268 KIDEENVLSQAEPEDLIKYGMIPEFVGRFPVVATLNQLDEDALIEILTKPKNAL 321
>gi|340787625|ref|YP_004753090.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Collimonas
fungivorans Ter331]
gi|340552892|gb|AEK62267.1| ATP-dependent Clp protease ATP-binding subunit clpX [Collimonas
fungivorans Ter331]
Length = 422
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 214/291 (73%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP P+EI + LD++VIGQE AK++LSVAVYNHYKR+ H K D
Sbjct: 64 ELPIPQEISELLDQYVIGQEPAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
++EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DIELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF L K ISER + S IGF A V++ +
Sbjct: 228 GRKHPNQDFVQIDTTNILFICGGAFDGLAKIISERSEKSGIGFSANVKSQSQ------RT 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+S +L E DL +GLIPE VGR P++ +L L E+ L+++L PKNAL
Sbjct: 282 SSEVLLDAEPEDLTRFGLIPELVGRLPVIATLAELNEEALIEILIAPKNAL 332
>gi|260596810|ref|YP_003209381.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
turicensis z3032]
gi|429102779|ref|ZP_19164753.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
turicensis 564]
gi|260215987|emb|CBA28640.1| ATP-dependent Clp protease ATP-binding subunit clpX [Cronobacter
turicensis z3032]
gi|426289428|emb|CCJ90866.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
turicensis 564]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 217/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQEKAKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRSHLDDYVIGQEKAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+ G + A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVK-----GKSQKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+ED L+++L EPKNAL
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEDALIQILKEPKNAL 333
>gi|297544143|ref|YP_003676445.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296841918|gb|ADH60434.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 424
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP PKEI + LD++VIGQEKAKK L+VAVYNHYKRI S +P D
Sbjct: 59 ELPKPKEIKEFLDQYVIGQEKAKKALAVAVYNHYKRI-------NSRLKP---------D 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 103 DVELQKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 163 QAADYDIEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF LEK I R ++GFG+ V++ +
Sbjct: 223 GRKHPHQEFIQIDTTNILFICGGAFEGLEKIIESRIGKKTLGFGSDVQSRKEKNI----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L + DL+ +G+IPEF+GR PI+V+L L ++ LV++LTEPKNAL
Sbjct: 278 -GEILSHIMPEDLLKFGMIPEFIGRVPIVVTLDPLDKEDLVRILTEPKNAL 327
>gi|417844174|ref|ZP_12490235.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
haemolyticus M21127]
gi|341947559|gb|EGT74206.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
haemolyticus M21127]
Length = 413
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/295 (56%), Positives = 215/295 (72%), Gaps = 26/295 (8%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIY--HANLKKGSGAEPKTAAAVD 316
E LPTP EI LD +VIGQ+ AKKVLSVAVYNHYKR+ H N
Sbjct: 60 EKLPTPHEIRAHLDDYVIGQDYAKKVLSVAVYNHYKRLRTNHEN---------------- 103
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
++VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE++L
Sbjct: 104 --NDVELGKSNILLIGPTGSGKTLLAQTLARRLNVPFAMADATTLTEAGYVGEDVENVLQ 161
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL E+N E A+QG++YIDE+DKI++K+E +I+RDVSGEGVQQALLK++EGT+ ++P
Sbjct: 162 KLLQNCEYNTEKAEQGIIYIDEIDKISRKSEGASITRDVSGEGVQQALLKLIEGTVASIP 221
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVT 495
+G RKHP+ + +++DT ILFICGGAF L+K IS+R Q S SIGF A V +
Sbjct: 222 PQGGRKHPQQEMVKLDTSKILFICGGAFAGLDKIISKRTQTSTSIGFSAKVEKD-----E 276
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ S L VE DL+ +GLIPEF+GR P++ L+ L E+ LV++LT+PKNAL
Sbjct: 277 EEKSLSELFRQVEPDDLMKFGLIPEFIGRLPMISPLSELDEEALVQILTQPKNAL 331
>gi|270156950|ref|ZP_06185607.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
longbeachae D-4968]
gi|289164626|ref|YP_003454764.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
longbeachae NSW150]
gi|269988975|gb|EEZ95229.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
longbeachae D-4968]
gi|288857799|emb|CBJ11643.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
longbeachae NSW150]
Length = 424
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 215/290 (74%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+P+EI LD++VIGQ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 63 LPSPQEISGFLDEYVIGQAHAKKVLSVAVYNHYKRLQHKS-----------------EDG 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 166 KCDYDVDKAQHGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I ER S IGF A ++ + D
Sbjct: 226 RKHPQQEFLQVDTSNILFICGGAFAGLEKVIRERSDKSGIGFSAQLKN--KKDTNDE--I 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L +ES DLI YGLIPEFVGR P++ +L L + L+ +LT PKNAL
Sbjct: 282 SKVLNQLESDDLIKYGLIPEFVGRLPVVTTLQELDQSALIDILTNPKNAL 331
>gi|375259345|ref|YP_005018515.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella oxytoca
KCTC 1686]
gi|397656326|ref|YP_006497028.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca E718]
gi|402843203|ref|ZP_10891605.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. OBRC7]
gi|421724876|ref|ZP_16164081.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella oxytoca
M5al]
gi|423101609|ref|ZP_17089311.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5242]
gi|423106997|ref|ZP_17094692.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5243]
gi|423112882|ref|ZP_17100573.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5245]
gi|423127776|ref|ZP_17115455.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5250]
gi|365908823|gb|AEX04276.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella oxytoca
KCTC 1686]
gi|376389123|gb|EHT01815.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5243]
gi|376390376|gb|EHT03062.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5245]
gi|376391397|gb|EHT04076.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5242]
gi|376394815|gb|EHT07465.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5250]
gi|394344932|gb|AFN31053.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca E718]
gi|402277834|gb|EJU26902.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. OBRC7]
gi|410374310|gb|EKP28986.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella oxytoca
M5al]
Length = 424
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEPAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L+ L+E+ L+++L EPKNAL
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILKEPKNAL 333
>gi|385323967|ref|YP_005878406.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
meningitidis 8013]
gi|261392354|emb|CAX49892.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
meningitidis 8013]
Length = 414
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/314 (54%), Positives = 219/314 (69%), Gaps = 26/314 (8%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+S G S G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTSSESVGQTSEEPGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRRRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNAL 550
D L+ +LTEPKNAL
Sbjct: 319 DALINILTEPKNAL 332
>gi|218549894|ref|YP_002383685.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia
fergusonii ATCC 35469]
gi|422804517|ref|ZP_16852949.1| ATP-dependent Clp protease [Escherichia fergusonii B253]
gi|424817251|ref|ZP_18242402.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia
fergusonii ECD227]
gi|226706591|sp|B7LME1.1|CLPX_ESCF3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|218357435|emb|CAQ90074.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia fergusonii ATCC 35469]
gi|324114665|gb|EGC08633.1| ATP-dependent Clp protease [Escherichia fergusonii B253]
gi|325498271|gb|EGC96130.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia
fergusonii ECD227]
Length = 424
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|437849000|ref|ZP_20847210.1| ATP-dependent protease ATP-binding subunit ClpX, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 6.0562-1]
gi|435338625|gb|ELP07836.1| ATP-dependent protease ATP-binding subunit ClpX, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 6.0562-1]
Length = 365
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 6 LPTPHEIRTHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 49
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 50 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 109
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 110 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 169
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+A +D A
Sbjct: 170 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK-----SDKAS 224
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 225 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 275
>gi|15800168|ref|NP_286180.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. EDL933]
gi|15829746|ref|NP_308519.1| ATP-dependent protease ATP-binding protein ClpX [Escherichia coli
O157:H7 str. Sakai]
gi|16128423|ref|NP_414972.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K-12 substr. MG1655]
gi|24111822|ref|NP_706332.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella flexneri
2a str. 301]
gi|26246449|ref|NP_752488.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
CFT073]
gi|30061940|ref|NP_836111.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella flexneri
2a str. 2457T]
gi|74311013|ref|YP_309432.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella sonnei
Ss046]
gi|82775655|ref|YP_402002.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella
dysenteriae Sd197]
gi|91209512|ref|YP_539498.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
UTI89]
gi|110640699|ref|YP_668427.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
536]
gi|110804466|ref|YP_687986.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella flexneri
5 str. 8401]
gi|117622698|ref|YP_851611.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
APEC O1]
gi|157157655|ref|YP_001461625.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
E24377A]
gi|157159965|ref|YP_001457283.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
HS]
gi|168754543|ref|ZP_02779550.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4401]
gi|168768393|ref|ZP_02793400.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4486]
gi|168778931|ref|ZP_02803938.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4076]
gi|168786289|ref|ZP_02811296.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC869]
gi|170021189|ref|YP_001726143.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
ATCC 8739]
gi|170080024|ref|YP_001729344.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
str. K-12 substr. DH10B]
gi|170682782|ref|YP_001742582.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
SMS-3-5]
gi|187730793|ref|YP_001879149.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella boydii
CDC 3083-94]
gi|188492973|ref|ZP_03000243.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 53638]
gi|193064164|ref|ZP_03045248.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli E22]
gi|208807403|ref|ZP_03249740.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4206]
gi|208814875|ref|ZP_03256054.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4045]
gi|208822907|ref|ZP_03263225.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4042]
gi|209398902|ref|YP_002269085.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. EC4115]
gi|209917655|ref|YP_002291739.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
SE11]
gi|215485519|ref|YP_002327950.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O127:H6 str. E2348/69]
gi|217325849|ref|ZP_03441933.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. TW14588]
gi|218553005|ref|YP_002385918.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
IAI1]
gi|218557348|ref|YP_002390261.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
S88]
gi|218688302|ref|YP_002396514.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
ED1a]
gi|218693901|ref|YP_002401568.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
55989]
gi|218698650|ref|YP_002406279.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
IAI39]
gi|218703722|ref|YP_002411241.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
UMN026]
gi|222155228|ref|YP_002555367.1| ATP-dependent Clp protease ATP-binding subunit clpX [Escherichia
coli LF82]
gi|227884551|ref|ZP_04002356.1| ATP-dependent protease ATP-binding subunit [Escherichia coli 83972]
gi|237707567|ref|ZP_04538048.1| ATP-dependent protease ATP-binding subunit [Escherichia sp.
3_2_53FAA]
gi|238899726|ref|YP_002925522.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
BW2952]
gi|251783946|ref|YP_002998250.1| clpX, subunit of ClpX ATP-dependent protease specificity component
and chaperone, ClpXP and ClpAXP [Escherichia coli
BL21(DE3)]
gi|253774573|ref|YP_003037404.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160507|ref|YP_003043615.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli B
str. REL606]
gi|254287311|ref|YP_003053059.1| ATP-dependent protease ATP-binding subunit [Escherichia coli
BL21(DE3)]
gi|254791622|ref|YP_003076459.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. TW14359]
gi|260842639|ref|YP_003220417.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O103:H2 str. 12009]
gi|260853661|ref|YP_003227552.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. 11368]
gi|260866599|ref|YP_003233001.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O111:H- str. 11128]
gi|261223921|ref|ZP_05938202.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O157:H7 str. FRIK2000]
gi|261256365|ref|ZP_05948898.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O157:H7 str. FRIK966]
gi|291281345|ref|YP_003498163.1| ATP-dependent Clp protease ATP-binding subunit clpX [Escherichia
coli O55:H7 str. CB9615]
gi|293403559|ref|ZP_06647650.1| ClpX [Escherichia coli FVEC1412]
gi|293408588|ref|ZP_06652427.1| ATP-dependent Clp protease [Escherichia coli B354]
gi|293413693|ref|ZP_06656342.1| ATP-dependent Clp protease [Escherichia coli B185]
gi|293418509|ref|ZP_06660944.1| ATP-dependent Clp protease [Escherichia coli B088]
gi|298379171|ref|ZP_06989052.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli FVEC1302]
gi|300818230|ref|ZP_07098441.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 107-1]
gi|300820316|ref|ZP_07100468.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 119-7]
gi|300900509|ref|ZP_07118676.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 198-1]
gi|300903294|ref|ZP_07121222.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 84-1]
gi|300918179|ref|ZP_07134786.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 115-1]
gi|300924165|ref|ZP_07140157.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 182-1]
gi|300937055|ref|ZP_07151921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 21-1]
gi|300947909|ref|ZP_07162057.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 116-1]
gi|300958006|ref|ZP_07170170.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 175-1]
gi|300988007|ref|ZP_07178487.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 45-1]
gi|300997373|ref|ZP_07181713.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 200-1]
gi|301022568|ref|ZP_07186440.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 69-1]
gi|301025666|ref|ZP_07189184.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 196-1]
gi|301301589|ref|ZP_07207724.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 124-1]
gi|301647364|ref|ZP_07247176.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 146-1]
gi|306813094|ref|ZP_07447287.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
NC101]
gi|307312184|ref|ZP_07591820.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli W]
gi|309787030|ref|ZP_07681642.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 1617]
gi|309794829|ref|ZP_07689250.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 145-7]
gi|312964537|ref|ZP_07778793.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2362-75]
gi|312970534|ref|ZP_07784715.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1827-70]
gi|331640958|ref|ZP_08342093.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H736]
gi|331645614|ref|ZP_08346718.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli M605]
gi|331651376|ref|ZP_08352401.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli M718]
gi|331656495|ref|ZP_08357457.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA206]
gi|331661819|ref|ZP_08362742.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA143]
gi|331666793|ref|ZP_08367667.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA271]
gi|331671985|ref|ZP_08372781.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA280]
gi|331676110|ref|ZP_08376822.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H591]
gi|331681833|ref|ZP_08382466.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H299]
gi|332281589|ref|ZP_08394002.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Shigella sp. D9]
gi|378714156|ref|YP_005279049.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KO11FL]
gi|383177028|ref|YP_005455033.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella sonnei
53G]
gi|384541994|ref|YP_005726055.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shigella
flexneri 2002017]
gi|386279463|ref|ZP_10057144.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
sp. 4_1_40B]
gi|386596686|ref|YP_006093086.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli DH1]
gi|386598155|ref|YP_006099661.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli IHE3034]
gi|386605608|ref|YP_006111908.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
UM146]
gi|386607801|ref|YP_006123287.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli W]
gi|386612633|ref|YP_006132299.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli UMNK88]
gi|386622810|ref|YP_006142538.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O7:K1 str. CE10]
gi|386628027|ref|YP_006147747.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
str. 'clone D i2']
gi|386632947|ref|YP_006152666.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
str. 'clone D i14']
gi|386637853|ref|YP_006104651.1| ATP-dependent specificity component of ClpP serine protease
[Escherichia coli ABU 83972]
gi|386702755|ref|YP_006166592.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KO11FL]
gi|386708241|ref|YP_006171962.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
W]
gi|387505456|ref|YP_006157712.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. RM12579]
gi|387605948|ref|YP_006094804.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
042]
gi|387610963|ref|YP_006114079.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
ETEC H10407]
gi|387615755|ref|YP_006118777.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O83:H1 str. NRG 857C]
gi|387620197|ref|YP_006127824.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli DH1]
gi|388476544|ref|YP_488730.1| ATPase and-specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K-12 substr. W3110]
gi|404373760|ref|ZP_10978995.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
sp. 1_1_43]
gi|407467888|ref|YP_006785670.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|407483382|ref|YP_006780531.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2011C-3493]
gi|410483934|ref|YP_006771480.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|414574651|ref|ZP_11431860.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 3233-85]
gi|415777141|ref|ZP_11488393.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3431]
gi|415790317|ref|ZP_11494959.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPECa14]
gi|415801141|ref|ZP_11499542.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli E128010]
gi|415814598|ref|ZP_11506196.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli LT-68]
gi|415821037|ref|ZP_11510051.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli OK1180]
gi|415828316|ref|ZP_11514913.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli OK1357]
gi|415836284|ref|ZP_11518696.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli RN587/1]
gi|415852352|ref|ZP_11528728.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 53G]
gi|415859378|ref|ZP_11533653.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2a str. 2457T]
gi|415862716|ref|ZP_11536156.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 85-1]
gi|415873839|ref|ZP_11541012.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 79-10]
gi|416296134|ref|ZP_11651340.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
flexneri CDC 796-83]
gi|416312993|ref|ZP_11657928.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. 1044]
gi|416316809|ref|ZP_11659941.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC1212]
gi|416325623|ref|ZP_11666031.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. 1125]
gi|416334478|ref|ZP_11671386.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli WV_060327]
gi|416341382|ref|ZP_11676005.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli EC4100B]
gi|416780507|ref|ZP_11876893.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. G5101]
gi|416791659|ref|ZP_11881792.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H- str. 493-89]
gi|416803302|ref|ZP_11886653.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H- str. H 2687]
gi|416811873|ref|ZP_11890146.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. 3256-97]
gi|416822834|ref|ZP_11895161.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. USDA 5905]
gi|416835008|ref|ZP_11901256.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. LSU-61]
gi|416895868|ref|ZP_11925752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_7v]
gi|417114411|ref|ZP_11965682.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1.2741]
gi|417132697|ref|ZP_11977482.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.0588]
gi|417139479|ref|ZP_11982901.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0259]
gi|417144119|ref|ZP_11985925.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1.2264]
gi|417152749|ref|ZP_11991540.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0497]
gi|417168503|ref|ZP_12000954.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0741]
gi|417173403|ref|ZP_12003199.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.2608]
gi|417179144|ref|ZP_12007244.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0624]
gi|417191047|ref|ZP_12013643.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 4.0522]
gi|417218200|ref|ZP_12023802.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli JB1-95]
gi|417224452|ref|ZP_12027743.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.154]
gi|417229525|ref|ZP_12031111.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.0959]
gi|417246915|ref|ZP_12040016.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 9.0111]
gi|417252909|ref|ZP_12044668.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 4.0967]
gi|417260706|ref|ZP_12048204.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2.3916]
gi|417267718|ref|ZP_12055079.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.3884]
gi|417270523|ref|ZP_12057876.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2.4168]
gi|417275380|ref|ZP_12062717.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.2303]
gi|417284656|ref|ZP_12071951.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3003]
gi|417288855|ref|ZP_12076140.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW07793]
gi|417292982|ref|ZP_12080262.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli B41]
gi|417299497|ref|ZP_12086727.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 900105 (10e)]
gi|417306940|ref|ZP_12093820.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli PCN033]
gi|417579662|ref|ZP_12230484.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_B2F1]
gi|417585233|ref|ZP_12236013.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_C165-02]
gi|417590121|ref|ZP_12240841.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2534-86]
gi|417595363|ref|ZP_12246033.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3030-1]
gi|417600720|ref|ZP_12251305.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_94C]
gi|417606430|ref|ZP_12256959.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_DG131-3]
gi|417611471|ref|ZP_12261945.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_EH250]
gi|417616827|ref|ZP_12267261.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli G58-1]
gi|417621707|ref|ZP_12272036.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_H.1.8]
gi|417627381|ref|ZP_12277628.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_MHI813]
gi|417632923|ref|ZP_12283144.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_S1191]
gi|417637738|ref|ZP_12287913.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TX1999]
gi|417661014|ref|ZP_12310595.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli AA86]
gi|417665524|ref|ZP_12315091.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_O31]
gi|417680501|ref|ZP_12329886.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 3594-74]
gi|417688201|ref|ZP_12337447.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 5216-82]
gi|417700468|ref|ZP_12349608.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-218]
gi|417705976|ref|ZP_12355041.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri VA-6]
gi|417710995|ref|ZP_12360002.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-272]
gi|417715956|ref|ZP_12364889.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-227]
gi|417721393|ref|ZP_12370239.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-304]
gi|417726777|ref|ZP_12375521.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-671]
gi|417731998|ref|ZP_12380669.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2747-71]
gi|417737259|ref|ZP_12385865.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 4343-70]
gi|417741877|ref|ZP_12390429.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2930-71]
gi|417754234|ref|ZP_12402329.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2B]
gi|417803794|ref|ZP_12450829.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. LB226692]
gi|417826440|ref|ZP_12473018.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri J1713]
gi|417867744|ref|ZP_12512779.1| clpX [Escherichia coli O104:H4 str. C227-11]
gi|417945742|ref|ZP_12588971.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
XH140A]
gi|417976588|ref|ZP_12617380.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
XH001]
gi|418042555|ref|ZP_12680748.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
W26]
gi|418253618|ref|ZP_12878643.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 6603-63]
gi|418262478|ref|ZP_12883857.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei str. Moseley]
gi|418301289|ref|ZP_12913083.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli UMNF18]
gi|418941048|ref|ZP_13494388.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H43 str. T22]
gi|418959267|ref|ZP_13511166.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
J53]
gi|418995501|ref|ZP_13543115.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1A]
gi|419000595|ref|ZP_13548157.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1B]
gi|419006129|ref|ZP_13553585.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1C]
gi|419011996|ref|ZP_13559361.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1D]
gi|419016900|ref|ZP_13564226.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1E]
gi|419022591|ref|ZP_13569833.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2A]
gi|419027402|ref|ZP_13574602.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2C]
gi|419033514|ref|ZP_13580612.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2D]
gi|419038182|ref|ZP_13585242.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2E]
gi|419043547|ref|ZP_13590521.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3A]
gi|419049040|ref|ZP_13595959.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3B]
gi|419055095|ref|ZP_13601953.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3C]
gi|419060689|ref|ZP_13607474.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3D]
gi|419066567|ref|ZP_13613248.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3E]
gi|419073421|ref|ZP_13618994.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3F]
gi|419078752|ref|ZP_13624237.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4A]
gi|419084403|ref|ZP_13629819.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4B]
gi|419090489|ref|ZP_13635809.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4C]
gi|419096619|ref|ZP_13641863.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4D]
gi|419102073|ref|ZP_13647240.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4E]
gi|419107526|ref|ZP_13652636.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4F]
gi|419113293|ref|ZP_13658328.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5A]
gi|419118879|ref|ZP_13663864.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5B]
gi|419124571|ref|ZP_13669475.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5C]
gi|419130099|ref|ZP_13674952.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5D]
gi|419134857|ref|ZP_13679666.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5E]
gi|419140969|ref|ZP_13685726.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6A]
gi|419146494|ref|ZP_13691190.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6B]
gi|419152271|ref|ZP_13696859.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6C]
gi|419157779|ref|ZP_13702305.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6D]
gi|419162711|ref|ZP_13707191.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6E]
gi|419168434|ref|ZP_13712832.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7A]
gi|419173777|ref|ZP_13717633.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7B]
gi|419179427|ref|ZP_13723052.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7C]
gi|419184985|ref|ZP_13728507.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7D]
gi|419190233|ref|ZP_13733701.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7E]
gi|419195535|ref|ZP_13738943.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8A]
gi|419201541|ref|ZP_13744769.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8B]
gi|419207439|ref|ZP_13750567.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8C]
gi|419213879|ref|ZP_13756911.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8D]
gi|419219703|ref|ZP_13762660.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8E]
gi|419225167|ref|ZP_13768057.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9A]
gi|419230952|ref|ZP_13773744.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9B]
gi|419236286|ref|ZP_13779037.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9C]
gi|419241880|ref|ZP_13784530.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9D]
gi|419247289|ref|ZP_13789904.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9E]
gi|419253065|ref|ZP_13795615.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10A]
gi|419259074|ref|ZP_13801534.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10B]
gi|419264949|ref|ZP_13807336.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10C]
gi|419270762|ref|ZP_13813095.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10D]
gi|419276560|ref|ZP_13818830.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10E]
gi|419282162|ref|ZP_13824384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10F]
gi|419287903|ref|ZP_13830021.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11A]
gi|419293242|ref|ZP_13835303.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11B]
gi|419298682|ref|ZP_13840700.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11C]
gi|419304966|ref|ZP_13846880.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11D]
gi|419309991|ref|ZP_13851868.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11E]
gi|419315310|ref|ZP_13857138.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12A]
gi|419321086|ref|ZP_13862829.1| ATP-dependent protease Clp, ATPase subunit [Escherichia coli
DEC12B]
gi|419327333|ref|ZP_13868966.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12C]
gi|419332743|ref|ZP_13874307.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12D]
gi|419339679|ref|ZP_13881156.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12E]
gi|419344086|ref|ZP_13885470.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13A]
gi|419348519|ref|ZP_13889872.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13B]
gi|419353422|ref|ZP_13894708.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13C]
gi|419358765|ref|ZP_13899996.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13D]
gi|419363727|ref|ZP_13904909.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13E]
gi|419368722|ref|ZP_13909851.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14A]
gi|419373907|ref|ZP_13914963.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14B]
gi|419379325|ref|ZP_13920306.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14C]
gi|419384581|ref|ZP_13925485.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14D]
gi|419389855|ref|ZP_13930694.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15A]
gi|419395027|ref|ZP_13935812.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15B]
gi|419400378|ref|ZP_13941112.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15C]
gi|419405550|ref|ZP_13946254.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15D]
gi|419411044|ref|ZP_13951717.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15E]
gi|419699354|ref|ZP_14226970.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
SCI-07]
gi|419805362|ref|ZP_14330500.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
AI27]
gi|419811817|ref|ZP_14336689.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O32:H37 str. P4]
gi|419862465|ref|ZP_14385070.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O103:H25 str. CVM9340]
gi|419867897|ref|ZP_14390211.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O103:H2 str. CVM9450]
gi|419876970|ref|ZP_14398629.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9534]
gi|419882603|ref|ZP_14403813.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9545]
gi|419888440|ref|ZP_14408947.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9570]
gi|419893035|ref|ZP_14413041.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9574]
gi|419900592|ref|ZP_14420018.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM9942]
gi|419906389|ref|ZP_14425301.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CVM10026]
gi|419915476|ref|ZP_14433841.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KD1]
gi|419916843|ref|ZP_14435127.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KD2]
gi|419923188|ref|ZP_14441150.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
541-15]
gi|419928056|ref|ZP_14445776.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
541-1]
gi|419937106|ref|ZP_14454022.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
576-1]
gi|419941390|ref|ZP_14458079.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
75]
gi|419945557|ref|ZP_14461996.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
HM605]
gi|419948923|ref|ZP_14465186.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
CUMT8]
gi|420088257|ref|ZP_14600161.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9602]
gi|420092933|ref|ZP_14604623.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9634]
gi|420103063|ref|ZP_14613977.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9455]
gi|420109691|ref|ZP_14619791.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9553]
gi|420113373|ref|ZP_14623116.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM10021]
gi|420119641|ref|ZP_14628906.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM10030]
gi|420125720|ref|ZP_14634511.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CVM10224]
gi|420130829|ref|ZP_14639309.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM9952]
gi|420267877|ref|ZP_14770284.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA22]
gi|420273504|ref|ZP_14775837.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA40]
gi|420278817|ref|ZP_14781084.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW06591]
gi|420284946|ref|ZP_14787164.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW10246]
gi|420290574|ref|ZP_14792739.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW11039]
gi|420296235|ref|ZP_14798332.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09109]
gi|420302065|ref|ZP_14804097.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW10119]
gi|420307959|ref|ZP_14809933.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1738]
gi|420313259|ref|ZP_14815167.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1734]
gi|420318882|ref|ZP_14820739.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2850-71]
gi|420324045|ref|ZP_14825831.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri CCH060]
gi|420329610|ref|ZP_14831315.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-1770]
gi|420340004|ref|ZP_14841531.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-404]
gi|420351207|ref|ZP_14852406.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 4444-74]
gi|420357064|ref|ZP_14858080.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 3226-85]
gi|420361958|ref|ZP_14862884.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 4822-66]
gi|420370211|ref|ZP_14870824.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 1235-66]
gi|420384076|ref|ZP_14883464.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPECa12]
gi|420389778|ref|ZP_14889051.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPEC C342-62]
gi|421681141|ref|ZP_16120971.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 1485-80]
gi|421777838|ref|ZP_16214428.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
AD30]
gi|421810661|ref|ZP_16246472.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0416]
gi|421816754|ref|ZP_16252317.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0821]
gi|421822139|ref|ZP_16257577.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK920]
gi|421828872|ref|ZP_16264202.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA7]
gi|422330695|ref|ZP_16411712.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli 4_1_47FAA]
gi|422355329|ref|ZP_16436045.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 117-3]
gi|422356282|ref|ZP_16436971.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 110-3]
gi|422363027|ref|ZP_16443575.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 153-1]
gi|422368705|ref|ZP_16449110.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 16-3]
gi|422378072|ref|ZP_16458295.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 60-1]
gi|422378679|ref|ZP_16458886.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 57-2]
gi|422748495|ref|ZP_16802408.1| ATP-dependent Clp protease [Escherichia coli H252]
gi|422753091|ref|ZP_16806918.1| ATP-dependent Clp protease [Escherichia coli H263]
gi|422763233|ref|ZP_16816988.1| ATP-dependent Clp protease [Escherichia coli E1167]
gi|422764969|ref|ZP_16818696.1| ATP-dependent Clp protease [Escherichia coli E1520]
gi|422769667|ref|ZP_16823358.1| ATP-dependent Clp protease [Escherichia coli E482]
gi|422777135|ref|ZP_16830788.1| ATP-dependent Clp protease [Escherichia coli H120]
gi|422782769|ref|ZP_16835554.1| ATP-dependent Clp protease [Escherichia coli TW10509]
gi|422785048|ref|ZP_16837787.1| ATP-dependent Clp protease [Escherichia coli H489]
gi|422791246|ref|ZP_16843949.1| ATP-dependent Clp protease [Escherichia coli TA007]
gi|422802319|ref|ZP_16850813.1| ATP-dependent Clp protease [Escherichia coli M863]
gi|422816452|ref|ZP_16864667.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli M919]
gi|422830601|ref|ZP_16878757.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli B093]
gi|422835146|ref|ZP_16883203.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli E101]
gi|422838960|ref|ZP_16886932.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H397]
gi|422960325|ref|ZP_16971773.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H494]
gi|422974759|ref|ZP_16976460.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli TA124]
gi|422991154|ref|ZP_16981925.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. C227-11]
gi|422993093|ref|ZP_16983857.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. C236-11]
gi|422998304|ref|ZP_16989060.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 09-7901]
gi|423006765|ref|ZP_16997508.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 04-8351]
gi|423008408|ref|ZP_16999146.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-3677]
gi|423022595|ref|ZP_17013298.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4404]
gi|423027749|ref|ZP_17018442.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4522]
gi|423033586|ref|ZP_17024270.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4623]
gi|423036452|ref|ZP_17027126.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C1]
gi|423041572|ref|ZP_17032239.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C2]
gi|423048258|ref|ZP_17038915.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C3]
gi|423051842|ref|ZP_17040650.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C4]
gi|423058807|ref|ZP_17047603.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C5]
gi|423652933|ref|ZP_17628236.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA31]
gi|423701219|ref|ZP_17675678.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H730]
gi|423710209|ref|ZP_17684559.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli B799]
gi|424075300|ref|ZP_17812664.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA505]
gi|424081628|ref|ZP_17818504.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA517]
gi|424088249|ref|ZP_17824524.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1996]
gi|424094468|ref|ZP_17830243.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1985]
gi|424100870|ref|ZP_17836049.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1990]
gi|424107683|ref|ZP_17842277.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93-001]
gi|424113672|ref|ZP_17847840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA3]
gi|424119734|ref|ZP_17853464.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA5]
gi|424125994|ref|ZP_17859212.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA9]
gi|424132077|ref|ZP_17864896.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA10]
gi|424138623|ref|ZP_17870935.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA14]
gi|424145063|ref|ZP_17876850.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA15]
gi|424151209|ref|ZP_17882480.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA24]
gi|424184947|ref|ZP_17887913.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA25]
gi|424266452|ref|ZP_17893815.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA28]
gi|424421801|ref|ZP_17899544.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA32]
gi|424453617|ref|ZP_17905172.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA33]
gi|424459915|ref|ZP_17910873.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA39]
gi|424466384|ref|ZP_17916592.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA41]
gi|424472945|ref|ZP_17922638.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA42]
gi|424478893|ref|ZP_17928156.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW07945]
gi|424484963|ref|ZP_17933847.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09098]
gi|424491085|ref|ZP_17939499.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09195]
gi|424498174|ref|ZP_17945464.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4203]
gi|424504403|ref|ZP_17951199.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4196]
gi|424510661|ref|ZP_17956915.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW14313]
gi|424518229|ref|ZP_17962675.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW14301]
gi|424524058|ref|ZP_17968099.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4421]
gi|424530266|ref|ZP_17973912.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4422]
gi|424536240|ref|ZP_17979519.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4013]
gi|424542148|ref|ZP_17984985.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4402]
gi|424548472|ref|ZP_17990696.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4439]
gi|424554736|ref|ZP_17996474.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4436]
gi|424561083|ref|ZP_18002384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4437]
gi|424567111|ref|ZP_18008043.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4448]
gi|424573299|ref|ZP_18013738.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1845]
gi|424579254|ref|ZP_18019203.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1863]
gi|424747926|ref|ZP_18176078.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CFSAN001629]
gi|424766681|ref|ZP_18194026.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O111:H11 str. CFSAN001630]
gi|424768159|ref|ZP_18195451.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O111:H8 str. CFSAN001632]
gi|424836930|ref|ZP_18261567.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella flexneri
5a str. M90T]
gi|425095925|ref|ZP_18498966.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.4870]
gi|425102064|ref|ZP_18504729.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.2239]
gi|425107865|ref|ZP_18510133.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 6.0172]
gi|425113767|ref|ZP_18515605.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0566]
gi|425118533|ref|ZP_18520268.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0569]
gi|425123687|ref|ZP_18525281.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0586]
gi|425129727|ref|ZP_18530843.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.2524]
gi|425136067|ref|ZP_18536806.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0833]
gi|425141967|ref|ZP_18542274.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0869]
gi|425148285|ref|ZP_18548196.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.0221]
gi|425153903|ref|ZP_18553466.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA34]
gi|425160352|ref|ZP_18559541.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA506]
gi|425165862|ref|ZP_18564686.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA507]
gi|425172155|ref|ZP_18570569.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA504]
gi|425178035|ref|ZP_18576104.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1999]
gi|425184184|ref|ZP_18581823.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1997]
gi|425190935|ref|ZP_18588076.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE1487]
gi|425197264|ref|ZP_18593929.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE037]
gi|425203925|ref|ZP_18600069.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK2001]
gi|425209680|ref|ZP_18605431.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA4]
gi|425215720|ref|ZP_18611053.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA23]
gi|425222290|ref|ZP_18617164.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA49]
gi|425228535|ref|ZP_18622946.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA45]
gi|425234835|ref|ZP_18628809.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TT12B]
gi|425240840|ref|ZP_18634490.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MA6]
gi|425246964|ref|ZP_18640188.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5905]
gi|425252695|ref|ZP_18645587.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli CB7326]
gi|425259006|ref|ZP_18651384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC96038]
gi|425265104|ref|ZP_18657042.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5412]
gi|425271134|ref|ZP_18662648.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW15901]
gi|425276313|ref|ZP_18667657.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli ARS4.2123]
gi|425281806|ref|ZP_18672927.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW00353]
gi|425286996|ref|ZP_18677931.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3006]
gi|425292564|ref|ZP_18683163.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA38]
gi|425298637|ref|ZP_18688687.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 07798]
gi|425303945|ref|ZP_18693734.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli N1]
gi|425309307|ref|ZP_18698787.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1735]
gi|425315220|ref|ZP_18704310.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1736]
gi|425321273|ref|ZP_18709960.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1737]
gi|425327465|ref|ZP_18715701.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1846]
gi|425333650|ref|ZP_18721383.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1847]
gi|425340071|ref|ZP_18727326.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1848]
gi|425345949|ref|ZP_18732765.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1849]
gi|425352162|ref|ZP_18738556.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1850]
gi|425358152|ref|ZP_18744138.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1856]
gi|425364262|ref|ZP_18749825.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1862]
gi|425370707|ref|ZP_18755683.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1864]
gi|425377259|ref|ZP_18761661.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1865]
gi|425383501|ref|ZP_18767392.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1866]
gi|425390201|ref|ZP_18773671.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1868]
gi|425396319|ref|ZP_18779377.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1869]
gi|425402304|ref|ZP_18784920.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1870]
gi|425408845|ref|ZP_18791012.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE098]
gi|425415115|ref|ZP_18796765.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK523]
gi|425421051|ref|ZP_18802282.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 0.1288]
gi|425426271|ref|ZP_18807332.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 0.1304]
gi|427803505|ref|ZP_18970572.1| ATP-dependent specificity component of clpP serine protease
[Escherichia coli chi7122]
gi|427808123|ref|ZP_18975188.1| ATP-dependent specificity component of clpP serine protease,
chaperone [Escherichia coli]
gi|428944920|ref|ZP_19017579.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.1467]
gi|428951074|ref|ZP_19023220.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.1042]
gi|428956930|ref|ZP_19028640.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 89.0511]
gi|428963262|ref|ZP_19034458.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.0091]
gi|428969325|ref|ZP_19039967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.0039]
gi|428975895|ref|ZP_19046076.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.2281]
gi|428981616|ref|ZP_19051362.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0055]
gi|428987880|ref|ZP_19057180.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0056]
gi|428993692|ref|ZP_19062607.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 94.0618]
gi|428999791|ref|ZP_19068309.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0183]
gi|429006033|ref|ZP_19073957.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.1288]
gi|429012378|ref|ZP_19079639.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0943]
gi|429018516|ref|ZP_19085309.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0428]
gi|429024268|ref|ZP_19090688.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0427]
gi|429030582|ref|ZP_19096468.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0939]
gi|429036768|ref|ZP_19102217.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0932]
gi|429042686|ref|ZP_19107700.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0107]
gi|429048496|ref|ZP_19113156.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0003]
gi|429053859|ref|ZP_19118355.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.1742]
gi|429059552|ref|ZP_19123704.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0007]
gi|429064997|ref|ZP_19128866.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0672]
gi|429071564|ref|ZP_19134921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0678]
gi|429076829|ref|ZP_19140049.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0713]
gi|429722634|ref|ZP_19257532.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9450]
gi|429774731|ref|ZP_19306734.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02030]
gi|429779994|ref|ZP_19311947.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02033-1]
gi|429784046|ref|ZP_19315959.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02092]
gi|429789384|ref|ZP_19321259.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02093]
gi|429795614|ref|ZP_19327440.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02281]
gi|429801540|ref|ZP_19333318.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02318]
gi|429805172|ref|ZP_19336919.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02913]
gi|429809983|ref|ZP_19341685.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-03439]
gi|429815743|ref|ZP_19347402.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-04080]
gi|429821331|ref|ZP_19352944.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-03943]
gi|429824045|ref|ZP_19355562.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0109]
gi|429830413|ref|ZP_19361280.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0010]
gi|429907005|ref|ZP_19372974.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9990]
gi|429911203|ref|ZP_19377159.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9941]
gi|429917039|ref|ZP_19382979.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4984]
gi|429922077|ref|ZP_19387998.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-5604]
gi|429927895|ref|ZP_19393801.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4986]
gi|429931827|ref|ZP_19397722.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4987]
gi|429933429|ref|ZP_19399319.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4988]
gi|429939083|ref|ZP_19404957.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-5603]
gi|429946726|ref|ZP_19412581.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-6006]
gi|429949358|ref|ZP_19415206.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec12-0465]
gi|429957642|ref|ZP_19423471.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec12-0466]
gi|432352101|ref|ZP_19595410.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE2]
gi|432356782|ref|ZP_19600029.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE4]
gi|432361189|ref|ZP_19604386.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE5]
gi|432368417|ref|ZP_19611522.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE10]
gi|432375521|ref|ZP_19618535.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE12]
gi|432380066|ref|ZP_19623030.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE15]
gi|432385895|ref|ZP_19628794.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE16]
gi|432390366|ref|ZP_19633230.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE21]
gi|432396312|ref|ZP_19639104.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE25]
gi|432400550|ref|ZP_19643310.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE26]
gi|432405308|ref|ZP_19648031.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE28]
gi|432410507|ref|ZP_19653190.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE39]
gi|432429587|ref|ZP_19672047.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE181]
gi|432430554|ref|ZP_19672999.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE187]
gi|432435083|ref|ZP_19677484.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE188]
gi|432439751|ref|ZP_19682114.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE189]
gi|432444875|ref|ZP_19687184.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE191]
gi|432453234|ref|ZP_19695474.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE193]
gi|432455366|ref|ZP_19697568.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE201]
gi|432459409|ref|ZP_19701573.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE204]
gi|432464450|ref|ZP_19706558.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE205]
gi|432469871|ref|ZP_19711924.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE206]
gi|432474458|ref|ZP_19716471.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE208]
gi|432479799|ref|ZP_19721764.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE210]
gi|432484166|ref|ZP_19726090.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE212]
gi|432492734|ref|ZP_19734573.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE213]
gi|432494307|ref|ZP_19736125.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE214]
gi|432503146|ref|ZP_19744883.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE220]
gi|432512646|ref|ZP_19749889.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE224]
gi|432521075|ref|ZP_19758240.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE228]
gi|432522591|ref|ZP_19759730.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE230]
gi|432529806|ref|ZP_19766850.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE233]
gi|432532627|ref|ZP_19769627.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE234]
gi|432541292|ref|ZP_19778167.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE235]
gi|432541814|ref|ZP_19778675.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE236]
gi|432547158|ref|ZP_19783955.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE237]
gi|432552446|ref|ZP_19789178.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE47]
gi|432562348|ref|ZP_19798975.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE51]
gi|432567277|ref|ZP_19803804.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE53]
gi|432572433|ref|ZP_19808924.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE55]
gi|432579115|ref|ZP_19815549.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE56]
gi|432582549|ref|ZP_19818959.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE57]
gi|432586737|ref|ZP_19823109.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE58]
gi|432591557|ref|ZP_19827886.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE60]
gi|432596323|ref|ZP_19832612.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE62]
gi|432600955|ref|ZP_19837210.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE66]
gi|432606323|ref|ZP_19842519.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE67]
gi|432610172|ref|ZP_19846345.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE72]
gi|432615212|ref|ZP_19851347.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE75]
gi|432620541|ref|ZP_19856587.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE76]
gi|432626022|ref|ZP_19862007.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE77]
gi|432630008|ref|ZP_19865958.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE80]
gi|432635752|ref|ZP_19871638.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE81]
gi|432639557|ref|ZP_19875402.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE83]
gi|432644873|ref|ZP_19880676.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE86]
gi|432649966|ref|ZP_19885728.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE87]
gi|432654448|ref|ZP_19890167.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE93]
gi|432659680|ref|ZP_19895341.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE111]
gi|432664626|ref|ZP_19900222.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE116]
gi|432669370|ref|ZP_19904919.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE119]
gi|432678033|ref|ZP_19913459.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE142]
gi|432678860|ref|ZP_19914263.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE143]
gi|432684271|ref|ZP_19919590.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE156]
gi|432690328|ref|ZP_19925574.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE161]
gi|432697755|ref|ZP_19932927.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE169]
gi|432712159|ref|ZP_19947211.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE8]
gi|432717450|ref|ZP_19952452.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE9]
gi|432722001|ref|ZP_19956928.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE17]
gi|432726547|ref|ZP_19961430.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE18]
gi|432731163|ref|ZP_19966002.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE45]
gi|432735964|ref|ZP_19970740.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE42]
gi|432740234|ref|ZP_19974956.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE23]
gi|432744375|ref|ZP_19979080.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE43]
gi|432748894|ref|ZP_19983517.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE29]
gi|432753235|ref|ZP_19987803.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE22]
gi|432758223|ref|ZP_19992746.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE46]
gi|432763729|ref|ZP_19998181.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE48]
gi|432769239|ref|ZP_20003612.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE50]
gi|432773618|ref|ZP_20007908.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE54]
gi|432777290|ref|ZP_20011544.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE59]
gi|432782346|ref|ZP_20016532.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE63]
gi|432786086|ref|ZP_20020254.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE65]
gi|432791687|ref|ZP_20025781.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE78]
gi|432797654|ref|ZP_20031682.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE79]
gi|432800721|ref|ZP_20034711.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE84]
gi|432804519|ref|ZP_20038465.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE91]
gi|432812550|ref|ZP_20046399.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE101]
gi|432813934|ref|ZP_20047745.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE115]
gi|432819757|ref|ZP_20053471.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE118]
gi|432825886|ref|ZP_20059543.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE123]
gi|432830426|ref|ZP_20064035.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE135]
gi|432833494|ref|ZP_20067042.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE136]
gi|432837987|ref|ZP_20071480.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE140]
gi|432842725|ref|ZP_20076146.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE141]
gi|432848216|ref|ZP_20080088.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE144]
gi|432859094|ref|ZP_20085268.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE146]
gi|432873100|ref|ZP_20092798.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE147]
gi|432879930|ref|ZP_20096750.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE154]
gi|432884404|ref|ZP_20099360.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE158]
gi|432893054|ref|ZP_20105159.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE165]
gi|432897225|ref|ZP_20108221.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE192]
gi|432902771|ref|ZP_20112451.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE194]
gi|432910124|ref|ZP_20117251.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE190]
gi|432932775|ref|ZP_20132629.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE184]
gi|432942311|ref|ZP_20139653.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE183]
gi|432945104|ref|ZP_20141399.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE196]
gi|432953571|ref|ZP_20145870.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE197]
gi|432959822|ref|ZP_20150108.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE202]
gi|432966549|ref|ZP_20155469.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE203]
gi|432970615|ref|ZP_20159493.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE207]
gi|432977160|ref|ZP_20165985.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE209]
gi|432984130|ref|ZP_20172869.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE215]
gi|432989543|ref|ZP_20178213.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE217]
gi|432994233|ref|ZP_20182850.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE218]
gi|432998652|ref|ZP_20187192.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE223]
gi|433003964|ref|ZP_20192402.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE227]
gi|433011172|ref|ZP_20199577.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE229]
gi|433012612|ref|ZP_20200995.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE104]
gi|433017394|ref|ZP_20205665.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE105]
gi|433022185|ref|ZP_20210211.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE106]
gi|433027480|ref|ZP_20215356.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE109]
gi|433031874|ref|ZP_20219689.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE112]
gi|433037374|ref|ZP_20224995.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE113]
gi|433041918|ref|ZP_20229453.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE117]
gi|433046509|ref|ZP_20233941.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE120]
gi|433051737|ref|ZP_20238975.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE122]
gi|433056776|ref|ZP_20243863.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE124]
gi|433061655|ref|ZP_20248621.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE125]
gi|433066646|ref|ZP_20253490.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE128]
gi|433071487|ref|ZP_20258189.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE129]
gi|433076636|ref|ZP_20263202.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE131]
gi|433081385|ref|ZP_20267860.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE133]
gi|433086042|ref|ZP_20272446.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE137]
gi|433090762|ref|ZP_20277070.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE138]
gi|433099986|ref|ZP_20286098.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE145]
gi|433109690|ref|ZP_20295570.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE150]
gi|433114389|ref|ZP_20300205.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE153]
gi|433118987|ref|ZP_20304701.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE157]
gi|433124006|ref|ZP_20309597.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE160]
gi|433128766|ref|ZP_20314246.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE163]
gi|433133586|ref|ZP_20318969.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE166]
gi|433138067|ref|ZP_20323354.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE167]
gi|433143000|ref|ZP_20328179.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE168]
gi|433147895|ref|ZP_20332961.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE174]
gi|433152582|ref|ZP_20337552.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE176]
gi|433157381|ref|ZP_20342257.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE177]
gi|433162252|ref|ZP_20347017.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE179]
gi|433167227|ref|ZP_20351903.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE180]
gi|433172308|ref|ZP_20356868.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE232]
gi|433176884|ref|ZP_20361351.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE82]
gi|433181971|ref|ZP_20366274.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE85]
gi|433187243|ref|ZP_20371372.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE88]
gi|433192368|ref|ZP_20376390.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE90]
gi|433197025|ref|ZP_20380954.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE94]
gi|433201859|ref|ZP_20385671.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE95]
gi|433206588|ref|ZP_20390289.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE97]
gi|433211368|ref|ZP_20394983.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE99]
gi|433324496|ref|ZP_20401783.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
J96]
gi|442590117|ref|ZP_21008901.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O10:K5(L):H4 str. ATCC 23506]
gi|442596445|ref|ZP_21014256.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O5:K4(L):H4 str. ATCC 23502]
gi|442606707|ref|ZP_21021502.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli Nissle 1917]
gi|443616466|ref|YP_007380322.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
APEC O78]
gi|444922756|ref|ZP_21242479.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 09BKT078844]
gi|444929078|ref|ZP_21248232.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0814]
gi|444934428|ref|ZP_21253372.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0815]
gi|444940007|ref|ZP_21258656.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0816]
gi|444945609|ref|ZP_21264031.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0839]
gi|444951154|ref|ZP_21269380.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0848]
gi|444956608|ref|ZP_21274610.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1753]
gi|444961971|ref|ZP_21279725.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1775]
gi|444967643|ref|ZP_21285120.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1793]
gi|444973145|ref|ZP_21290428.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1805]
gi|444978685|ref|ZP_21295683.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli ATCC 700728]
gi|444983979|ref|ZP_21300849.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA11]
gi|444989222|ref|ZP_21305964.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA19]
gi|444994576|ref|ZP_21311173.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA13]
gi|445000072|ref|ZP_21316536.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA2]
gi|445005528|ref|ZP_21321869.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA47]
gi|445010701|ref|ZP_21326895.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA48]
gi|445016483|ref|ZP_21332534.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA8]
gi|445021930|ref|ZP_21337853.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 7.1982]
gi|445027172|ref|ZP_21342952.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1781]
gi|445032667|ref|ZP_21348293.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1762]
gi|445038360|ref|ZP_21353831.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA35]
gi|445043575|ref|ZP_21358915.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.4880]
gi|445049147|ref|ZP_21364318.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0083]
gi|445054797|ref|ZP_21369750.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0670]
gi|450185744|ref|ZP_21889214.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli SEPT362]
gi|450211062|ref|ZP_21894201.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O08]
gi|450239655|ref|ZP_21899082.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli S17]
gi|452969099|ref|ZP_21967326.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. EC4009]
gi|62288037|sp|P0A6H1.2|CLPX_ECOLI RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|62288038|sp|P0A6H2.2|CLPX_ECOL6 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|62288039|sp|P0A6H3.2|CLPX_ECO57 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|62288040|sp|P0A6H4.2|CLPX_SHIFL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|122424751|sp|Q1RF97.1|CLPX_ECOUT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|122957619|sp|Q0T7E5.1|CLPX_SHIF8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123049431|sp|Q0TKK3.1|CLPX_ECOL5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123563420|sp|Q32JJ4.1|CLPX_SHIDS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123617887|sp|Q3Z4W5.1|CLPX_SHISS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214775|sp|A1A8A7.1|CLPX_ECOK1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167009013|sp|A7ZIJ6.1|CLPX_ECO24 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167009014|sp|A7ZX96.1|CLPX_ECOHS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|189044134|sp|B1J010.1|CLPX_ECOLC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706586|sp|B7MD97.1|CLPX_ECO45 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706587|sp|B7NJ56.1|CLPX_ECO7I RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706588|sp|B7M3T1.1|CLPX_ECO8A RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706589|sp|B7N8Z2.1|CLPX_ECOLU RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706590|sp|B1LJJ5.1|CLPX_ECOSM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|229889854|sp|B1XFM6.1|CLPX_ECODH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238066655|sp|B5Z3U5.1|CLPX_ECO5E RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238066656|sp|B6HZP5.1|CLPX_ECOSE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238689516|sp|B2U4P3.1|CLPX_SHIB3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763846|sp|B7UJR1.1|CLPX_ECO27 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763847|sp|B7L675.1|CLPX_ECO55 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763848|sp|B7MQF4.1|CLPX_ECO81 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|259491256|sp|C4ZTJ5.1|CLPX_ECOBW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|12513300|gb|AAG54788.1|AE005223_3 ATP-dependent specificity component of clpP serine protease,
chaperone [Escherichia coli O157:H7 str. EDL933]
gi|26106847|gb|AAN79032.1|AE016756_215 ATP-dependent Clp protease ATP-binding subunit clpX [Escherichia
coli CFT073]
gi|347729|gb|AAA16116.1| ATP-dependent protease ATPase subunit [Escherichia coli]
gi|1773122|gb|AAB40194.1| ATP-dependent Clp proteinase [Escherichia coli]
gi|1786642|gb|AAC73541.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K-12 substr. MG1655]
gi|13359949|dbj|BAB33915.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli O157:H7 str. Sakai]
gi|24050613|gb|AAN42039.1| ATP-dependent specificity component of clpP serine protease
[Shigella flexneri 2a str. 301]
gi|30040184|gb|AAP15917.1| ATP-dependent specificity component of clpP serine protease
[Shigella flexneri 2a str. 2457T]
gi|73854490|gb|AAZ87197.1| ATP-dependent specificity component of clpP serine protease,
chaperone [Shigella sonnei Ss046]
gi|81239803|gb|ABB60513.1| ATP-dependent specificity component of clpP serine protease
[Shigella dysenteriae Sd197]
gi|85674578|dbj|BAE76218.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K12 substr. W3110]
gi|91071086|gb|ABE05967.1| ATP-dependent specificity component of ClpP serine protease,
chaperone [Escherichia coli UTI89]
gi|110342291|gb|ABG68528.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli 536]
gi|110614014|gb|ABF02681.1| ATP-dependent protease ATP-binding subunit protease [Shigella
flexneri 5 str. 8401]
gi|115511822|gb|ABI99896.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli APEC O1]
gi|157065645|gb|ABV04900.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli HS]
gi|157079685|gb|ABV19393.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli E24377A]
gi|169756117|gb|ACA78816.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli ATCC 8739]
gi|169887859|gb|ACB01566.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K-12 substr. DH10B]
gi|170520500|gb|ACB18678.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli SMS-3-5]
gi|187427785|gb|ACD07059.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii CDC 3083-94]
gi|188488172|gb|EDU63275.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 53638]
gi|189002703|gb|EDU71689.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4076]
gi|189357986|gb|EDU76405.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4401]
gi|189362383|gb|EDU80802.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4486]
gi|189373571|gb|EDU91987.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC869]
gi|192929193|gb|EDV82803.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli E22]
gi|208727204|gb|EDZ76805.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4206]
gi|208731523|gb|EDZ80211.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4045]
gi|208737100|gb|EDZ84784.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4042]
gi|209160302|gb|ACI37735.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4115]
gi|209743844|gb|ACI70229.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli]
gi|209743846|gb|ACI70230.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli]
gi|209743848|gb|ACI70231.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli]
gi|209743850|gb|ACI70232.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli]
gi|209743852|gb|ACI70233.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli]
gi|209910914|dbj|BAG75988.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
SE11]
gi|215263591|emb|CAS07921.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O127:H6 str. E2348/69]
gi|217322070|gb|EEC30494.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. TW14588]
gi|218350633|emb|CAU96325.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli 55989]
gi|218359773|emb|CAQ97314.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli IAI1]
gi|218364117|emb|CAR01782.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli S88]
gi|218368636|emb|CAR16375.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli IAI39]
gi|218425866|emb|CAR06672.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli ED1a]
gi|218430819|emb|CAR11693.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli UMN026]
gi|222032233|emb|CAP74972.1| ATP-dependent Clp protease ATP-binding subunit clpX [Escherichia
coli LF82]
gi|226898777|gb|EEH85036.1| ATP-dependent protease ATP-binding subunit [Escherichia sp.
3_2_53FAA]
gi|227838637|gb|EEJ49103.1| ATP-dependent protease ATP-binding subunit [Escherichia coli 83972]
gi|238860036|gb|ACR62034.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli BW2952]
gi|242376219|emb|CAQ30910.1| clpX, subunit of ClpX ATP-dependent protease specificity component
and chaperone, ClpXP and ClpAXP [Escherichia coli
BL21(DE3)]
gi|253325617|gb|ACT30219.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|253972408|gb|ACT38079.1| ATP-dependent protease ATP-binding subunit [Escherichia coli B str.
REL606]
gi|253976618|gb|ACT42288.1| ATP-dependent protease ATP-binding subunit [Escherichia coli
BL21(DE3)]
gi|254591022|gb|ACT70383.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O157:H7 str. TW14359]
gi|257752310|dbj|BAI23812.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O26:H11 str. 11368]
gi|257757786|dbj|BAI29283.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O103:H2 str. 12009]
gi|257762955|dbj|BAI34450.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O111:H- str. 11128]
gi|260450375|gb|ACX40797.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DH1]
gi|281599778|gb|ADA72762.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shigella
flexneri 2002017]
gi|284920248|emb|CBG33307.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
042]
gi|290761218|gb|ADD55179.1| ATP-dependent Clp protease ATP-binding subunit clpX [Escherichia
coli O55:H7 str. CB9615]
gi|291325037|gb|EFE64452.1| ATP-dependent Clp protease [Escherichia coli B088]
gi|291429412|gb|EFF02432.1| ClpX [Escherichia coli FVEC1412]
gi|291433751|gb|EFF06724.1| ATP-dependent Clp protease [Escherichia coli B185]
gi|291464929|gb|ADE05991.1| ATP-dependent protease ClpX [Escherichia coli]
gi|291471766|gb|EFF14249.1| ATP-dependent Clp protease [Escherichia coli B354]
gi|294493190|gb|ADE91946.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli IHE3034]
gi|298280284|gb|EFI21788.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli FVEC1302]
gi|299880020|gb|EFI88231.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 196-1]
gi|300304192|gb|EFJ58712.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 200-1]
gi|300315273|gb|EFJ65057.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 175-1]
gi|300355990|gb|EFJ71860.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 198-1]
gi|300397449|gb|EFJ80987.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 69-1]
gi|300404589|gb|EFJ88127.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 84-1]
gi|300407559|gb|EFJ91097.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 45-1]
gi|300414630|gb|EFJ97940.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 115-1]
gi|300419618|gb|EFK02929.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 182-1]
gi|300452509|gb|EFK16129.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 116-1]
gi|300457886|gb|EFK21379.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 21-1]
gi|300527101|gb|EFK48170.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 119-7]
gi|300529121|gb|EFK50183.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 107-1]
gi|300843086|gb|EFK70846.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 124-1]
gi|301074509|gb|EFK89315.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 146-1]
gi|305853857|gb|EFM54296.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
NC101]
gi|306907686|gb|EFN38188.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli W]
gi|307552345|gb|ADN45120.1| ATP-dependent specificity component of ClpP serine protease
[Escherichia coli ABU 83972]
gi|307628092|gb|ADN72396.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
UM146]
gi|308121482|gb|EFO58744.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 145-7]
gi|308924608|gb|EFP70103.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 1617]
gi|309700699|emb|CBI99995.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
ETEC H10407]
gi|310337183|gb|EFQ02321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1827-70]
gi|312290771|gb|EFR18648.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2362-75]
gi|312945016|gb|ADR25843.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O83:H1 str. NRG 857C]
gi|313646935|gb|EFS11392.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2a str. 2457T]
gi|315059718|gb|ADT74045.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli W]
gi|315135120|dbj|BAJ42279.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli DH1]
gi|315256266|gb|EFU36234.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 85-1]
gi|315289844|gb|EFU49234.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 110-3]
gi|315294228|gb|EFU53579.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 153-1]
gi|315299562|gb|EFU58810.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 16-3]
gi|315616621|gb|EFU97238.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3431]
gi|320186068|gb|EFW60813.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
flexneri CDC 796-83]
gi|320192854|gb|EFW67494.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC1212]
gi|320197088|gb|EFW71707.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli WV_060327]
gi|320201682|gb|EFW76258.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli EC4100B]
gi|320638433|gb|EFX08147.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. G5101]
gi|320643814|gb|EFX12937.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H- str. 493-89]
gi|320649165|gb|EFX17743.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H- str. H 2687]
gi|320656058|gb|EFX23974.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320661208|gb|EFX28639.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. USDA 5905]
gi|320665184|gb|EFX32277.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. LSU-61]
gi|323153475|gb|EFZ39729.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPECa14]
gi|323160451|gb|EFZ46399.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli E128010]
gi|323164239|gb|EFZ50046.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 53G]
gi|323170524|gb|EFZ56174.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli LT-68]
gi|323178293|gb|EFZ63871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli OK1180]
gi|323184731|gb|EFZ70102.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli OK1357]
gi|323191358|gb|EFZ76621.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli RN587/1]
gi|323379717|gb|ADX51985.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli KO11FL]
gi|323938624|gb|EGB34873.1| ATP-dependent Clp protease [Escherichia coli E1520]
gi|323943245|gb|EGB39401.1| ATP-dependent Clp protease [Escherichia coli E482]
gi|323945343|gb|EGB41399.1| ATP-dependent Clp protease [Escherichia coli H120]
gi|323952950|gb|EGB48818.1| ATP-dependent Clp protease [Escherichia coli H252]
gi|323958631|gb|EGB54334.1| ATP-dependent Clp protease [Escherichia coli H263]
gi|323963428|gb|EGB58990.1| ATP-dependent Clp protease [Escherichia coli H489]
gi|323965125|gb|EGB60584.1| ATP-dependent Clp protease [Escherichia coli M863]
gi|323972292|gb|EGB67502.1| ATP-dependent Clp protease [Escherichia coli TA007]
gi|323976077|gb|EGB71170.1| ATP-dependent Clp protease [Escherichia coli TW10509]
gi|324010069|gb|EGB79288.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 57-2]
gi|324010652|gb|EGB79871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 60-1]
gi|324016701|gb|EGB85920.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 117-3]
gi|324116926|gb|EGC10839.1| ATP-dependent Clp protease [Escherichia coli E1167]
gi|326341202|gb|EGD64994.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. 1044]
gi|326346023|gb|EGD69762.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. 1125]
gi|327254766|gb|EGE66382.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_7v]
gi|330910232|gb|EGH38742.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli AA86]
gi|331037756|gb|EGI09976.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H736]
gi|331045776|gb|EGI17902.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli M605]
gi|331051117|gb|EGI23169.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli M718]
gi|331054743|gb|EGI26752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA206]
gi|331060241|gb|EGI32205.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA143]
gi|331066017|gb|EGI37901.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA271]
gi|331070974|gb|EGI42333.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA280]
gi|331076168|gb|EGI47450.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H591]
gi|331081035|gb|EGI52200.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H299]
gi|332094594|gb|EGI99640.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 5216-82]
gi|332098459|gb|EGJ03425.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 3594-74]
gi|332103941|gb|EGJ07287.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Shigella sp. D9]
gi|332341802|gb|AEE55136.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli UMNK88]
gi|332760729|gb|EGJ91017.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 4343-70]
gi|332761521|gb|EGJ91803.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2747-71]
gi|332763736|gb|EGJ93974.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-671]
gi|332768359|gb|EGJ98543.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2930-71]
gi|333007845|gb|EGK27321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-218]
gi|333008124|gb|EGK27599.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri VA-6]
gi|333010899|gb|EGK30325.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-272]
gi|333020700|gb|EGK39960.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-227]
gi|333021843|gb|EGK41091.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-304]
gi|335577005|gb|EGM63238.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri J1713]
gi|338771516|gb|EGP26256.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli PCN033]
gi|339413387|gb|AEJ55059.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli UMNF18]
gi|340741503|gb|EGR75649.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. LB226692]
gi|341921033|gb|EGT70637.1| clpX [Escherichia coli O104:H4 str. C227-11]
gi|342362474|gb|EGU26592.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
XH140A]
gi|342930643|gb|EGU99365.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 79-10]
gi|344193755|gb|EGV47833.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
XH001]
gi|345341458|gb|EGW73863.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_C165-02]
gi|345344082|gb|EGW76458.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_B2F1]
gi|345345294|gb|EGW77640.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2534-86]
gi|345354065|gb|EGW86292.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_94C]
gi|345361731|gb|EGW93889.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3030-1]
gi|345365644|gb|EGW97751.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_DG131-3]
gi|345365956|gb|EGW98054.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_EH250]
gi|345377685|gb|EGX09616.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_MHI813]
gi|345381199|gb|EGX13084.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli G58-1]
gi|345386282|gb|EGX16117.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_H.1.8]
gi|345391233|gb|EGX21027.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_S1191]
gi|345395482|gb|EGX25226.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TX1999]
gi|349736548|gb|AEQ11254.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O7:K1 str. CE10]
gi|354858264|gb|EHF18715.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 04-8351]
gi|354860140|gb|EHF20587.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. C227-11]
gi|354866836|gb|EHF27259.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. C236-11]
gi|354877172|gb|EHF37532.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 09-7901]
gi|354879479|gb|EHF39817.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4404]
gi|354884066|gb|EHF44380.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-3677]
gi|354885867|gb|EHF46159.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4522]
gi|354888934|gb|EHF49188.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4623]
gi|354901535|gb|EHF61662.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C1]
gi|354905766|gb|EHF65849.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C2]
gi|354908273|gb|EHF68329.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C3]
gi|354918745|gb|EHF78701.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C5]
gi|354922433|gb|EHF82348.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C4]
gi|355418926|gb|AER83123.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
str. 'clone D i2']
gi|355423846|gb|AER88042.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
str. 'clone D i14']
gi|359331198|dbj|BAL37645.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K-12 substr. MDS42]
gi|371594123|gb|EHN82995.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H494]
gi|371595519|gb|EHN84368.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli TA124]
gi|371604297|gb|EHN92926.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli B093]
gi|371611431|gb|EHN99953.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H397]
gi|371612951|gb|EHO01454.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli E101]
gi|373248399|gb|EHP67829.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli 4_1_47FAA]
gi|374357450|gb|AEZ39157.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. RM12579]
gi|375323617|gb|EHS69322.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H43 str. T22]
gi|377848891|gb|EHU13867.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1A]
gi|377850930|gb|EHU15885.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1C]
gi|377854085|gb|EHU18975.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1B]
gi|377862761|gb|EHU27568.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1D]
gi|377866874|gb|EHU31638.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1E]
gi|377868229|gb|EHU32973.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2A]
gi|377879180|gb|EHU43753.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2B]
gi|377883933|gb|EHU48451.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2D]
gi|377885904|gb|EHU50395.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2C]
gi|377898426|gb|EHU62786.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2E]
gi|377900620|gb|EHU64952.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3A]
gi|377902536|gb|EHU66840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3B]
gi|377914361|gb|EHU78484.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3C]
gi|377918754|gb|EHU82801.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3D]
gi|377920841|gb|EHU84856.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3E]
gi|377932287|gb|EHU96141.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3F]
gi|377934477|gb|EHU98308.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4A]
gi|377940608|gb|EHV04357.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4B]
gi|377950680|gb|EHV14307.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4C]
gi|377951519|gb|EHV15138.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4D]
gi|377955448|gb|EHV19004.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4E]
gi|377966084|gb|EHV29497.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5A]
gi|377967397|gb|EHV30803.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4F]
gi|377973510|gb|EHV36850.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5B]
gi|377981473|gb|EHV44732.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5D]
gi|377981809|gb|EHV45067.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5C]
gi|377988580|gb|EHV51758.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5E]
gi|378000302|gb|EHV63376.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6A]
gi|378001422|gb|EHV64481.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6B]
gi|378003855|gb|EHV66895.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6C]
gi|378014253|gb|EHV77159.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6D]
gi|378017177|gb|EHV80052.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6E]
gi|378018840|gb|EHV81686.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7A]
gi|378027888|gb|EHV90513.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7C]
gi|378032403|gb|EHV94984.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7D]
gi|378037730|gb|EHW00253.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7B]
gi|378042336|gb|EHW04785.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7E]
gi|378052756|gb|EHW15058.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8A]
gi|378057135|gb|EHW19370.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8B]
gi|378063095|gb|EHW25265.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8C]
gi|378069190|gb|EHW31285.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8D]
gi|378072757|gb|EHW34814.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8E]
gi|378081869|gb|EHW43817.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9A]
gi|378082780|gb|EHW44723.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9B]
gi|378090508|gb|EHW52345.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9C]
gi|378095203|gb|EHW56993.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9D]
gi|378102387|gb|EHW64064.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9E]
gi|378107901|gb|EHW69519.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10A]
gi|378116923|gb|EHW78441.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10B]
gi|378119184|gb|EHW80679.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10C]
gi|378121707|gb|EHW83158.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10D]
gi|378134749|gb|EHW96070.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10E]
gi|378136537|gb|EHW97831.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11A]
gi|378139985|gb|EHX01215.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10F]
gi|378147353|gb|EHX08501.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11B]
gi|378153095|gb|EHX14181.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11D]
gi|378157258|gb|EHX18300.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11C]
gi|378161714|gb|EHX22690.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11E]
gi|378175103|gb|EHX35922.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12A]
gi|378175609|gb|EHX36425.1| ATP-dependent protease Clp, ATPase subunit [Escherichia coli
DEC12B]
gi|378177103|gb|EHX37904.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12C]
gi|378190585|gb|EHX51169.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13A]
gi|378191145|gb|EHX51721.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12E]
gi|378191958|gb|EHX52532.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12D]
gi|378204181|gb|EHX64597.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13B]
gi|378208330|gb|EHX68714.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13D]
gi|378209339|gb|EHX69713.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13C]
gi|378219747|gb|EHX80014.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13E]
gi|378221928|gb|EHX82170.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14A]
gi|378226321|gb|EHX86508.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14B]
gi|378234470|gb|EHX94548.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14C]
gi|378237159|gb|EHX97186.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14D]
gi|378244657|gb|EHY04599.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15A]
gi|378251879|gb|EHY11775.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15B]
gi|378252209|gb|EHY12103.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15C]
gi|378257939|gb|EHY17775.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15D]
gi|378261235|gb|EHY21030.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15E]
gi|380349369|gb|EIA37641.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
SCI-07]
gi|383394282|gb|AFH19240.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KO11FL]
gi|383403933|gb|AFH10176.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
W]
gi|383465982|gb|EID61003.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella flexneri
5a str. M90T]
gi|383474514|gb|EID66500.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
W26]
gi|384377969|gb|EIE35861.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
J53]
gi|384471621|gb|EIE55694.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
AI27]
gi|385155300|gb|EIF17304.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O32:H37 str. P4]
gi|385539925|gb|EIF86752.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli M919]
gi|385704857|gb|EIG41929.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli B799]
gi|385712909|gb|EIG49848.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H730]
gi|386123462|gb|EIG72058.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
sp. 4_1_40B]
gi|386141486|gb|EIG82636.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1.2741]
gi|386150551|gb|EIH01840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.0588]
gi|386157207|gb|EIH13549.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0259]
gi|386164002|gb|EIH25788.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1.2264]
gi|386169473|gb|EIH35981.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0497]
gi|386170551|gb|EIH42604.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0741]
gi|386176095|gb|EIH53574.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.2608]
gi|386186396|gb|EIH69112.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0624]
gi|386192019|gb|EIH80760.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 4.0522]
gi|386193083|gb|EIH87382.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli JB1-95]
gi|386199500|gb|EIH98491.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.154]
gi|386206015|gb|EII10521.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.0959]
gi|386209543|gb|EII20030.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 9.0111]
gi|386216840|gb|EII33329.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 4.0967]
gi|386225864|gb|EII48189.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2.3916]
gi|386230076|gb|EII57431.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.3884]
gi|386236866|gb|EII68838.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2.4168]
gi|386242033|gb|EII78946.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.2303]
gi|386242865|gb|EII84600.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3003]
gi|386247647|gb|EII93820.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW07793]
gi|386252554|gb|EIJ02245.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli B41]
gi|386257289|gb|EIJ12780.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 900105 (10e)]
gi|388341953|gb|EIL08030.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9534]
gi|388345222|gb|EIL11008.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O103:H25 str. CVM9340]
gi|388346437|gb|EIL12154.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O103:H2 str. CVM9450]
gi|388360310|gb|EIL24531.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9570]
gi|388361233|gb|EIL25367.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9545]
gi|388368619|gb|EIL32244.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9574]
gi|388377633|gb|EIL40428.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM9942]
gi|388379314|gb|EIL41984.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CVM10026]
gi|388383820|gb|EIL45568.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KD1]
gi|388394240|gb|EIL55543.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
541-15]
gi|388395244|gb|EIL56468.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KD2]
gi|388398325|gb|EIL59245.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
576-1]
gi|388400949|gb|EIL61634.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
75]
gi|388406307|gb|EIL66713.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
541-1]
gi|388415405|gb|EIL75335.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
HM605]
gi|388420455|gb|EIL80147.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
CUMT8]
gi|390650914|gb|EIN29287.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1996]
gi|390652872|gb|EIN31044.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA517]
gi|390653353|gb|EIN31500.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA505]
gi|390669797|gb|EIN46390.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93-001]
gi|390673008|gb|EIN49261.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1990]
gi|390674060|gb|EIN50267.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1985]
gi|390688661|gb|EIN63693.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA3]
gi|390692171|gb|EIN66869.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA9]
gi|390693117|gb|EIN67757.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA5]
gi|390708496|gb|EIN81716.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA10]
gi|390710349|gb|EIN83371.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA15]
gi|390713048|gb|EIN85991.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA14]
gi|390720357|gb|EIN93069.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA22]
gi|390733890|gb|EIO05451.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA25]
gi|390733931|gb|EIO05490.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA24]
gi|390737015|gb|EIO08330.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA28]
gi|390752272|gb|EIO22118.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA31]
gi|390752753|gb|EIO22559.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA32]
gi|390755180|gb|EIO24728.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA33]
gi|390762422|gb|EIO31680.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA40]
gi|390776244|gb|EIO44195.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA41]
gi|390778642|gb|EIO46399.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA42]
gi|390784193|gb|EIO51766.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA39]
gi|390785791|gb|EIO53333.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW06591]
gi|390795065|gb|EIO62350.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW10246]
gi|390801805|gb|EIO68856.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW11039]
gi|390810317|gb|EIO77078.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW07945]
gi|390812007|gb|EIO78692.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09109]
gi|390819406|gb|EIO85739.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW10119]
gi|390823112|gb|EIO89184.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09098]
gi|390837266|gb|EIP01697.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4203]
gi|390840073|gb|EIP04132.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4196]
gi|390842295|gb|EIP06149.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09195]
gi|390855683|gb|EIP18365.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW14301]
gi|390860078|gb|EIP22405.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4421]
gi|390860499|gb|EIP22813.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW14313]
gi|390871774|gb|EIP33154.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4422]
gi|390876376|gb|EIP37362.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4013]
gi|390886183|gb|EIP46321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4402]
gi|390888167|gb|EIP48063.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4439]
gi|390894981|gb|EIP54471.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4436]
gi|390904185|gb|EIP63201.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1738]
gi|390910584|gb|EIP69315.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4437]
gi|390911824|gb|EIP70505.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1734]
gi|390915106|gb|EIP73624.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4448]
gi|390925021|gb|EIP82757.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1863]
gi|390926191|gb|EIP83785.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1845]
gi|391254799|gb|EIQ13958.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2850-71]
gi|391256935|gb|EIQ16057.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri CCH060]
gi|391259140|gb|EIQ18215.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-1770]
gi|391273844|gb|EIQ32662.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-404]
gi|391288800|gb|EIQ47299.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 3226-85]
gi|391289062|gb|EIQ47558.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 4444-74]
gi|391289279|gb|EIQ47774.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 3233-85]
gi|391296885|gb|EIQ54961.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 4822-66]
gi|391309585|gb|EIQ67253.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPECa12]
gi|391315323|gb|EIQ72856.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPEC C342-62]
gi|391320476|gb|EIQ77311.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 1235-66]
gi|394390768|gb|EJE67728.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9602]
gi|394394617|gb|EJE71180.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CVM10224]
gi|394399938|gb|EJE75899.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9634]
gi|394405881|gb|EJE80978.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9553]
gi|394409053|gb|EJE83640.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9455]
gi|394411992|gb|EJE86172.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM10021]
gi|394431103|gb|EJF03346.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM10030]
gi|394433366|gb|EJF05398.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM9952]
gi|397786921|gb|EJK97752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_O31]
gi|397901492|gb|EJL17838.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 6603-63]
gi|397903015|gb|EJL19322.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei str. Moseley]
gi|404292799|gb|EJZ49590.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
sp. 1_1_43]
gi|404341889|gb|EJZ68291.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 1485-80]
gi|406779096|gb|AFS58520.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|407055679|gb|AFS75730.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2011C-3493]
gi|407063923|gb|AFS84970.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|408072550|gb|EKH06871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA7]
gi|408076059|gb|EKH10288.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK920]
gi|408086072|gb|EKH19614.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA34]
gi|408090668|gb|EKH23939.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA506]
gi|408095713|gb|EKH28678.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA507]
gi|408102856|gb|EKH35245.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA504]
gi|408110229|gb|EKH42056.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1999]
gi|408116883|gb|EKH48150.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1997]
gi|408122384|gb|EKH53246.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE1487]
gi|408130434|gb|EKH60582.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE037]
gi|408132503|gb|EKH62479.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK2001]
gi|408141625|gb|EKH71080.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA4]
gi|408150525|gb|EKH79107.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA23]
gi|408153413|gb|EKH81808.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA49]
gi|408158627|gb|EKH86744.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA45]
gi|408167183|gb|EKH94710.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TT12B]
gi|408172669|gb|EKH99732.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MA6]
gi|408174741|gb|EKI01705.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5905]
gi|408187057|gb|EKI13038.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli CB7326]
gi|408192242|gb|EKI17819.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC96038]
gi|408192339|gb|EKI17915.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5412]
gi|408198910|gb|EKI24121.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW15901]
gi|408206226|gb|EKI31038.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW00353]
gi|408207167|gb|EKI31921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli ARS4.2123]
gi|408218930|gb|EKI43112.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3006]
gi|408221640|gb|EKI45573.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 07798]
gi|408232197|gb|EKI55448.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli N1]
gi|408233176|gb|EKI56311.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA38]
gi|408239285|gb|EKI62038.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1735]
gi|408249191|gb|EKI71143.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1736]
gi|408253460|gb|EKI75054.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1737]
gi|408259574|gb|EKI80733.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1846]
gi|408268457|gb|EKI88813.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1847]
gi|408270232|gb|EKI90441.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1848]
gi|408278943|gb|EKI98610.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1849]
gi|408285382|gb|EKJ04412.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1850]
gi|408288147|gb|EKJ06985.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1856]
gi|408300618|gb|EKJ18303.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1862]
gi|408301170|gb|EKJ18824.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1864]
gi|408310093|gb|EKJ27177.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1865]
gi|408318347|gb|EKJ34562.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1868]
gi|408318838|gb|EKJ35040.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1866]
gi|408331656|gb|EKJ46800.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1869]
gi|408337176|gb|EKJ51912.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE098]
gi|408338661|gb|EKJ53307.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1870]
gi|408347913|gb|EKJ62056.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 0.1288]
gi|408350693|gb|EKJ64541.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK523]
gi|408353295|gb|EKJ66817.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 0.1304]
gi|408457120|gb|EKJ80921.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
AD30]
gi|408559015|gb|EKK35358.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.2239]
gi|408559379|gb|EKK35702.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.4870]
gi|408560350|gb|EKK36614.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 6.0172]
gi|408573158|gb|EKK49017.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0566]
gi|408573671|gb|EKK49501.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0569]
gi|408585479|gb|EKK60346.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0586]
gi|408590505|gb|EKK64980.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.2524]
gi|408592320|gb|EKK66712.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0833]
gi|408604557|gb|EKK78131.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0869]
gi|408605963|gb|EKK79443.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0416]
gi|408611154|gb|EKK84516.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.0221]
gi|408617329|gb|EKK90451.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0821]
gi|412961687|emb|CCK45594.1| ATP-dependent specificity component of clpP serine protease
[Escherichia coli chi7122]
gi|412968302|emb|CCJ42919.1| ATP-dependent specificity component of clpP serine protease,
chaperone [Escherichia coli]
gi|421934147|gb|EKT91924.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O111:H11 str. CFSAN001630]
gi|421945315|gb|EKU02532.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CFSAN001629]
gi|421946797|gb|EKU03911.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O111:H8 str. CFSAN001632]
gi|427214752|gb|EKV84024.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.1042]
gi|427217282|gb|EKV86351.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 89.0511]
gi|427217768|gb|EKV86820.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.1467]
gi|427234005|gb|EKW01714.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.2281]
gi|427234226|gb|EKW01925.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.0039]
gi|427236319|gb|EKW03900.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.0091]
gi|427251582|gb|EKW18145.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0056]
gi|427253164|gb|EKW19607.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0055]
gi|427254458|gb|EKW20819.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 94.0618]
gi|427270576|gb|EKW35454.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0943]
gi|427271064|gb|EKW35913.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0183]
gi|427276297|gb|EKW40871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.1288]
gi|427286556|gb|EKW50394.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0428]
gi|427292271|gb|EKW55625.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0427]
gi|427293896|gb|EKW57116.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0939]
gi|427304914|gb|EKW67534.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0003]
gi|427306554|gb|EKW69073.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0932]
gi|427311008|gb|EKW73228.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0107]
gi|427321630|gb|EKW83309.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.1742]
gi|427322537|gb|EKW84168.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0007]
gi|427334471|gb|EKW95540.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0713]
gi|427334774|gb|EKW95842.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0678]
gi|427336798|gb|EKW97747.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0672]
gi|429260205|gb|EKY43798.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0109]
gi|429261865|gb|EKY45257.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0010]
gi|429351547|gb|EKY88267.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02030]
gi|429352250|gb|EKY88966.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02033-1]
gi|429353008|gb|EKY89717.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02092]
gi|429366921|gb|EKZ03522.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02093]
gi|429367832|gb|EKZ04424.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02281]
gi|429370327|gb|EKZ06893.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02318]
gi|429382714|gb|EKZ19178.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02913]
gi|429384947|gb|EKZ21401.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-03943]
gi|429385470|gb|EKZ21923.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-03439]
gi|429397163|gb|EKZ33510.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-04080]
gi|429399391|gb|EKZ35712.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9450]
gi|429399699|gb|EKZ36019.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9990]
gi|429410453|gb|EKZ46675.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4984]
gi|429412353|gb|EKZ48550.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4986]
gi|429419338|gb|EKZ55476.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4987]
gi|429427897|gb|EKZ63977.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-5603]
gi|429434741|gb|EKZ70765.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4988]
gi|429435565|gb|EKZ71583.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-5604]
gi|429440106|gb|EKZ76085.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec12-0465]
gi|429444706|gb|EKZ80651.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-6006]
gi|429451011|gb|EKZ86903.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec12-0466]
gi|429456503|gb|EKZ92348.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9941]
gi|430879592|gb|ELC02923.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE4]
gi|430880734|gb|ELC04009.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE2]
gi|430888883|gb|ELC11554.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE10]
gi|430891424|gb|ELC13960.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE5]
gi|430901425|gb|ELC23393.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE12]
gi|430909944|gb|ELC31302.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE16]
gi|430912045|gb|ELC33296.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE15]
gi|430918694|gb|ELC39695.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE25]
gi|430922723|gb|ELC43470.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE21]
gi|430929270|gb|ELC49781.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE26]
gi|430932804|gb|ELC53223.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE28]
gi|430938443|gb|ELC58684.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE39]
gi|430947422|gb|ELC67120.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE181]
gi|430956176|gb|ELC74852.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE187]
gi|430966662|gb|ELC84025.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE188]
gi|430969561|gb|ELC86665.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE189]
gi|430974576|gb|ELC91499.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE193]
gi|430976250|gb|ELC93125.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE191]
gi|430985238|gb|ELD01844.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE201]
gi|430992493|gb|ELD08864.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE204]
gi|430997201|gb|ELD13468.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE205]
gi|430999938|gb|ELD16012.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE206]
gi|431010398|gb|ELD24746.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE208]
gi|431010816|gb|ELD25160.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE210]
gi|431013140|gb|ELD26874.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE213]
gi|431018568|gb|ELD31999.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE212]
gi|431027823|gb|ELD40868.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE214]
gi|431042148|gb|ELD52640.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE220]
gi|431044966|gb|ELD55221.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE224]
gi|431045629|gb|ELD55859.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE228]
gi|431054711|gb|ELD64280.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE230]
gi|431057197|gb|ELD66667.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE233]
gi|431063819|gb|ELD73033.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE234]
gi|431064546|gb|ELD73413.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE235]
gi|431078331|gb|ELD85389.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE236]
gi|431085331|gb|ELD91444.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE237]
gi|431087078|gb|ELD93083.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE47]
gi|431099581|gb|ELE04601.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE51]
gi|431103110|gb|ELE07780.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE53]
gi|431108817|gb|ELE12788.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE56]
gi|431110771|gb|ELE14688.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE55]
gi|431119565|gb|ELE22564.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE57]
gi|431124017|gb|ELE26671.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE58]
gi|431133001|gb|ELE34999.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE60]
gi|431133990|gb|ELE35956.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE62]
gi|431140545|gb|ELE42311.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE67]
gi|431144002|gb|ELE45710.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE66]
gi|431151485|gb|ELE52500.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE72]
gi|431158152|gb|ELE58773.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE75]
gi|431162900|gb|ELE63340.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE76]
gi|431165157|gb|ELE65515.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE77]
gi|431174034|gb|ELE74095.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE81]
gi|431174527|gb|ELE74572.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE80]
gi|431184354|gb|ELE84112.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE86]
gi|431185132|gb|ELE84862.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE83]
gi|431193337|gb|ELE92673.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE87]
gi|431195633|gb|ELE94602.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE93]
gi|431203797|gb|ELF02387.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE111]
gi|431204694|gb|ELF03252.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE116]
gi|431207362|gb|ELF05619.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE142]
gi|431213760|gb|ELF11616.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE119]
gi|431225053|gb|ELF22262.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE143]
gi|431225242|gb|ELF22447.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE156]
gi|431230816|gb|ELF26586.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE161]
gi|431246949|gb|ELF41192.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE169]
gi|431259674|gb|ELF52037.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE8]
gi|431267054|gb|ELF58587.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE9]
gi|431268363|gb|ELF59837.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE17]
gi|431276655|gb|ELF67675.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE18]
gi|431278567|gb|ELF69557.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE45]
gi|431286363|gb|ELF77189.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE23]
gi|431286852|gb|ELF77672.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE42]
gi|431295829|gb|ELF85561.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE43]
gi|431300632|gb|ELF90183.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE29]
gi|431305616|gb|ELF93937.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE22]
gi|431312009|gb|ELG00157.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE46]
gi|431313381|gb|ELG01354.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE48]
gi|431319279|gb|ELG06963.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE50]
gi|431320739|gb|ELG08369.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE54]
gi|431330864|gb|ELG18128.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE59]
gi|431332058|gb|ELG19301.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE63]
gi|431342017|gb|ELG29013.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE65]
gi|431342483|gb|ELG29462.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE78]
gi|431345874|gb|ELG32788.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE79]
gi|431351310|gb|ELG38100.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE84]
gi|431357442|gb|ELG44109.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE101]
gi|431357852|gb|ELG44518.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE91]
gi|431368953|gb|ELG55184.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE115]
gi|431370759|gb|ELG56552.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE118]
gi|431375270|gb|ELG60614.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE123]
gi|431380188|gb|ELG65088.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE135]
gi|431388656|gb|ELG72379.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE136]
gi|431391890|gb|ELG75494.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE140]
gi|431397253|gb|ELG80709.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE141]
gi|431402565|gb|ELG85877.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE144]
gi|431405201|gb|ELG88444.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE147]
gi|431408149|gb|ELG91341.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE146]
gi|431413554|gb|ELG96319.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE154]
gi|431419992|gb|ELH02326.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE158]
gi|431425506|gb|ELH07576.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE165]
gi|431430035|gb|ELH11869.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE192]
gi|431437416|gb|ELH18926.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE194]
gi|431447199|gb|ELH27941.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE190]
gi|431454779|gb|ELH35137.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE183]
gi|431456808|gb|ELH37151.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE184]
gi|431463012|gb|ELH43206.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE196]
gi|431470701|gb|ELH50598.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE197]
gi|431475910|gb|ELH55714.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE203]
gi|431478717|gb|ELH58462.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE202]
gi|431482264|gb|ELH61967.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE209]
gi|431485752|gb|ELH65409.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE207]
gi|431498788|gb|ELH77973.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE217]
gi|431506267|gb|ELH84865.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE215]
gi|431509567|gb|ELH87816.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE218]
gi|431514221|gb|ELH92063.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE223]
gi|431517285|gb|ELH94807.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE227]
gi|431519384|gb|ELH96836.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE229]
gi|431535947|gb|ELI12282.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE104]
gi|431537564|gb|ELI13681.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE105]
gi|431541070|gb|ELI16520.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE106]
gi|431545990|gb|ELI20633.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE109]
gi|431555550|gb|ELI29390.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE113]
gi|431560181|gb|ELI33702.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE112]
gi|431560391|gb|ELI33905.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE117]
gi|431572898|gb|ELI45722.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE120]
gi|431574219|gb|ELI47001.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE124]
gi|431575872|gb|ELI48595.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE122]
gi|431588359|gb|ELI59644.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE125]
gi|431591181|gb|ELI62181.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE128]
gi|431593674|gb|ELI63966.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE129]
gi|431601213|gb|ELI70730.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE131]
gi|431606030|gb|ELI75414.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE133]
gi|431610204|gb|ELI79505.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE137]
gi|431615214|gb|ELI84344.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE138]
gi|431622852|gb|ELI91537.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE145]
gi|431631767|gb|ELJ00073.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE150]
gi|431636889|gb|ELJ05008.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE153]
gi|431649336|gb|ELJ16694.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE157]
gi|431650109|gb|ELJ17446.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE160]
gi|431651636|gb|ELJ18875.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE163]
gi|431663401|gb|ELJ30163.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE166]
gi|431665036|gb|ELJ31763.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE167]
gi|431666688|gb|ELJ33315.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE168]
gi|431676788|gb|ELJ42871.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE174]
gi|431678638|gb|ELJ44634.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE176]
gi|431682067|gb|ELJ47836.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE177]
gi|431692290|gb|ELJ57728.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE179]
gi|431694182|gb|ELJ59567.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE180]
gi|431696253|gb|ELJ61440.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE232]
gi|431709789|gb|ELJ74237.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE88]
gi|431710589|gb|ELJ74963.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE82]
gi|431711867|gb|ELJ76174.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE85]
gi|431721844|gb|ELJ85836.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE90]
gi|431725794|gb|ELJ89633.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE94]
gi|431726375|gb|ELJ90185.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE95]
gi|431733144|gb|ELJ96585.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE97]
gi|431736023|gb|ELJ99365.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE99]
gi|432347010|gb|ELL41474.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
J96]
gi|441609775|emb|CCP94814.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O10:K5(L):H4 str. ATCC 23506]
gi|441655106|emb|CCQ00169.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O5:K4(L):H4 str. ATCC 23502]
gi|441712014|emb|CCQ07479.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli Nissle 1917]
gi|443420974|gb|AGC85878.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
APEC O78]
gi|444542454|gb|ELV21812.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0814]
gi|444550932|gb|ELV28950.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 09BKT078844]
gi|444551799|gb|ELV29675.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0815]
gi|444565050|gb|ELV41951.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0839]
gi|444567161|gb|ELV43931.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0816]
gi|444571480|gb|ELV47962.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0848]
gi|444582365|gb|ELV58159.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1753]
gi|444585182|gb|ELV60762.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1775]
gi|444586124|gb|ELV61645.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1793]
gi|444600004|gb|ELV74860.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli ATCC 700728]
gi|444600470|gb|ELV75306.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA11]
gi|444608387|gb|ELV82920.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1805]
gi|444614924|gb|ELV89149.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA13]
gi|444615590|gb|ELV89794.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA19]
gi|444623579|gb|ELV97499.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA2]
gi|444632671|gb|ELW06226.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA48]
gi|444632892|gb|ELW06441.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA47]
gi|444637805|gb|ELW11170.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA8]
gi|444647985|gb|ELW20941.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 7.1982]
gi|444650091|gb|ELW22943.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1781]
gi|444654181|gb|ELW26875.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1762]
gi|444663162|gb|ELW35407.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA35]
gi|444667435|gb|ELW39473.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.4880]
gi|444672858|gb|ELW44544.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0083]
gi|444674581|gb|ELW46111.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0670]
gi|449322677|gb|EMD12660.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O08]
gi|449324925|gb|EMD14845.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli SEPT362]
gi|449324968|gb|EMD14887.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli S17]
Length = 424
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|416287649|ref|ZP_11648935.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
boydii ATCC 9905]
gi|320178280|gb|EFW53254.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
boydii ATCC 9905]
Length = 424
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|359796111|ref|ZP_09298716.1| ATP-dependent protease ATP-binding subunit ClpX [Achromobacter
arsenitoxydans SY8]
gi|359365797|gb|EHK67489.1| ATP-dependent protease ATP-binding subunit ClpX [Achromobacter
arsenitoxydans SY8]
Length = 432
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 210/291 (72%), Gaps = 21/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI LD++VIGQ K++L+VAVYNHYKRI H +K D
Sbjct: 63 ELPTPAEIKTFLDQYVIGQTSPKRMLAVAVYNHYKRIRHGEIK---------------GD 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN++L+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 EVELSKSNIMLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+ ++YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVEKAQRAIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFI GGAF LEK I +R + S IGF A VRA GV
Sbjct: 228 GRKHPNQDFVQVDTTNILFIVGGAFDGLEKVIRDRTEKSGIGFSASVRAKSERGV----- 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE DLI +GLIPE VGR P++ +L L E LV++LTEPKNAL
Sbjct: 283 -GELFSEVEPEDLIKFGLIPELVGRLPVVATLDELDEAALVQILTEPKNAL 332
>gi|339639091|emb|CCC18310.1| ATP-dependent Clp protease ATP-binding subunit Cl pX [Lactobacillus
pentosus IG1]
Length = 422
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/296 (56%), Positives = 218/296 (73%), Gaps = 24/296 (8%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+PTPK+I LD++VIGQ +AK+ LSVAVYNHYKR+ A D+DD
Sbjct: 60 DIPTPKQIVDELDQYVIGQNEAKRTLSVAVYNHYKRV---------------KAMADSDD 104
Query: 320 NV-----ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
EL+KSN+ L+GPTGSGKT LA++LAR ++VPF IADATTLT+AGYVGEDVE+I
Sbjct: 105 EETEDGPELQKSNISLVGPTGSGKTFLAQSLARILDVPFAIADATTLTEAGYVGEDVENI 164
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
L KLL A+++VE A++G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI N
Sbjct: 165 LLKLLQNADYDVERAEKGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIAN 224
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP+ + IQ+DT +ILFI GGAF +E + R D +IGFG + + V
Sbjct: 225 VPPQGGRKHPQQEFIQIDTTNILFIVGGAFDGIEDIVKRRLGDKTIGFGTD--TDGKNAV 282
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
D + SL++ V DL+ +GLIPEF+GR PIL +L LTED LV++LTEPKNAL
Sbjct: 283 LDD--SKSLMQQVVPEDLLQFGLIPEFIGRLPILTALERLTEDDLVRILTEPKNAL 336
>gi|434399018|ref|YP_007133022.1| ATP-dependent Clp protease ATP-binding subunit clpX [Stanieria
cyanosphaera PCC 7437]
gi|428270115|gb|AFZ36056.1| ATP-dependent Clp protease ATP-binding subunit clpX [Stanieria
cyanosphaera PCC 7437]
Length = 444
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/303 (55%), Positives = 221/303 (72%), Gaps = 21/303 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
R GG D+P P+EI + LD+ VIGQE+AKKVLSVAVYNHYKR+ A K G
Sbjct: 70 ERVGGIAF-RDIPKPREIKRYLDEHVIGQEEAKKVLSVAVYNHYKRLSLAGTDKERG--- 125
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+D+VEL+KSNVLLMGPTG GKTLLA+TLA+ + VPF +ADATTLT+AGYVGE
Sbjct: 126 --------EDSVELQKSNVLLMGPTGCGKTLLAQTLAKILEVPFAVADATTLTEAGYVGE 177
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+IL +LL A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLE
Sbjct: 178 DVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLE 237
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ NVP +G RKHP D IQ+DT +ILFICGGAFV L+K + R ++GF
Sbjct: 238 GTVANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLDKVVERRLGKKAMGF------- 290
Query: 490 MRAGVT--DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPK 547
++ G T + + +L+ ++ DL+ +G+IPEFVGR P+ +L L E+ LV++LT+P+
Sbjct: 291 IQNGETPSKEKLATDILQQLQPDDLVKFGMIPEFVGRIPVNAALEPLDEEALVEILTQPR 350
Query: 548 NAL 550
NAL
Sbjct: 351 NAL 353
>gi|333922903|ref|YP_004496483.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333748464|gb|AEF93571.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 416
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 217/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP PKEI LD++VIGQE AKK L+VAVYNHYKRI NL G E
Sbjct: 57 DLPKPKEIKAILDQYVIGQESAKKQLAVAVYNHYKRI---NL--GGKVE----------- 100
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN++++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 101 DVELSKSNIIMLGPTGSGKTLLAQTLARLLNVPFAIADATSLTEAGYVGEDVENILLKLI 160
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 161 QAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIASVPPQG 220
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF +EK I R ++GFGA +++ +
Sbjct: 221 GRKHPHQEFIQLDTTNILFICGGAFDGIEKIIQNRTGKKTMGFGAEIQSKREQKI----- 275
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L + DL+ +GLIPEFVGR P++V+L AL ED LV++LTEPKNAL
Sbjct: 276 -GEILAQILPEDLLKFGLIPEFVGRLPVIVTLDALDEDALVRILTEPKNAL 325
>gi|404369990|ref|ZP_10975317.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
sp. 7_2_43FAA]
gi|226913879|gb|EEH99080.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
sp. 7_2_43FAA]
Length = 431
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 220/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P EI LD++VIGQEKAKK LSVAVYNHYKRI ++NL DD+
Sbjct: 60 VPKPNEIKNYLDQYVIGQEKAKKSLSVAVYNHYKRI-NSNLI---------------DDD 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 IELQKSNILLLGPTGSGKTLLAQTLAKFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT +VP +G
Sbjct: 164 SADYDIERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + +Q++T +ILFICGGAF ++K I +R + SSIGFGA + + V
Sbjct: 224 RKHPHQEFLQINTSNILFICGGAFDGVDKIIEKRTEKSSIGFGANITSRHTKDV------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL+ + SDL+ +GLIPEFVGR P++V+L +L D LV +LT+PKNAL
Sbjct: 278 GKLLKDIMPSDLLKFGLIPEFVGRLPVVVTLESLDNDALVNILTQPKNAL 327
>gi|150016210|ref|YP_001308464.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
beijerinckii NCIMB 8052]
gi|189082489|sp|A6LT28.1|CLPX_CLOB8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|149902675|gb|ABR33508.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
beijerinckii NCIMB 8052]
Length = 429
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 220/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P EI + LD +VIGQE+AKK L+VAVYNHYKRI N K D +
Sbjct: 60 VPKPNEIKEYLDSYVIGQERAKKSLAVAVYNHYKRI---NTNK-------------EDID 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELSKSNILLLGPTGSGKTLLAQTLARFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 NADYDVEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I R + SS+GFGA ++A V
Sbjct: 224 RKHPHQEFIQINTSNILFICGGAFDGVDKIIENRTRKSSMGFGAQIQAKHEKDV------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SLL+ + +DL+ +GLIPEFVGR PILV+L +L ++ L+++LT+PKNAL
Sbjct: 278 GSLLKEIMPADLLKFGLIPEFVGRLPILVTLESLDKEALIQILTKPKNAL 327
>gi|429099392|ref|ZP_19161498.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
dublinensis 582]
gi|426285732|emb|CCJ87611.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
dublinensis 582]
Length = 428
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 217/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQEKAKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRSHLDDYVIGQEKAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+ G + A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVK-----GKSQKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+ED L+++L EPKNAL
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEDALIQILKEPKNAL 333
>gi|188534631|ref|YP_001908428.1| ATP-dependent protease ATP-binding subunit ClpX [Erwinia
tasmaniensis Et1/99]
gi|188029673|emb|CAO97552.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Erwinia
tasmaniensis Et1/99]
Length = 424
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 220/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVLSVAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLSVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+T+AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELGKSNILLIGPTGSGKTLLAETMARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K +S+R S IGFGA V+ G ++ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVVSQRVDSGSGIGFGASVK-----GKSEKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +LT L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILREPKNAL 333
>gi|425740489|ref|ZP_18858660.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-487]
gi|425494753|gb|EKU60948.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-487]
Length = 437
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 220/291 (75%), Gaps = 20/291 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG-SGAEPKTAAAVDNDD 319
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G SG K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKR-----LKVGQSGHVSK--------- 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 166 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ ++
Sbjct: 226 GRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKKK-----DESKK 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE +DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 281 IAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNAL 331
>gi|417831546|ref|ZP_12478068.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 01-09591]
gi|340735698|gb|EGR64754.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 01-09591]
Length = 410
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 50 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 93
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 94 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 153
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 154 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 213
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 214 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 268
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 269 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 319
>gi|410612508|ref|ZP_11323585.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
psychrophila 170]
gi|410167849|dbj|GAC37474.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
psychrophila 170]
Length = 425
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 164/293 (55%), Positives = 219/293 (74%), Gaps = 22/293 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+DLPTPKEI LD +VIGQE AKKVLSVAVYNHYKR+ + ++ +G
Sbjct: 63 DDLPTPKEIHAHLDDYVIGQEHAKKVLSVAVYNHYKRLRNGDVHEG-------------- 108
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VEL KSN+LLMGPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 109 --VELGKSNILLMGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGF + ++ ++
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAHTGTGIGFASEIK-----NTSNK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L+ VE DL+ YGLIPEF+GR P+L L L+ED LV++L EPKN+L
Sbjct: 282 SQEGEWLKKVEPEDLVKYGLIPEFIGRLPVLTCLEELSEDALVQILREPKNSL 334
>gi|348028492|ref|YP_004871178.1| ATP-dependent protease ATP-binding subunit ClpX [Glaciecola
nitratireducens FR1064]
gi|347945835|gb|AEP29185.1| ATP-dependent protease ATP-binding subunit ClpX [Glaciecola
nitratireducens FR1064]
Length = 425
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 220/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI K LD +VIGQE AKKVL+VAVYNHYKR+ + ++ G
Sbjct: 65 LPTPAEIHKHLDDYVIGQEHAKKVLAVAVYNHYKRLRNNDVHDG---------------- 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++ E AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 KCDYDPEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R +++ IGFGA V++++ +
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAAKNAGIGFGAEVKSSL-----NKKA 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L + VE DL+ YGLIPEF+GR P++ SL L ED L+++L EPKNA+
Sbjct: 284 VSQLFKEVEPEDLVKYGLIPEFIGRLPVVASLEELNEDALIQILKEPKNAI 334
>gi|385340272|ref|YP_005894144.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
meningitidis G2136]
gi|325198516|gb|ADY93972.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis G2136]
Length = 414
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 212/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK A N
Sbjct: 64 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKAGA------N 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 108 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K ++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 KCDFDVEKAQRGIVYIDEIDKISRKGDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 228 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL
Sbjct: 283 TKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNAL 332
>gi|304413825|ref|ZP_07395242.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Candidatus Regiella insecticola LSR1]
gi|304283545|gb|EFL91940.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Candidatus Regiella insecticola LSR1]
Length = 423
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 217/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKK L+VAVYNHYKR+ + D+++
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKALAVAVYNHYKRLCNG----------------DSNNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ ++NVE AQ+G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 168 KCDYNVEKAQRGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTIAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS+R + IGFGA V++ V +
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRLNTGTGIGFGAIVKS-----VCEKPS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL E DLI +GLIPEF+GR P++ +LT L ++ L+K+L EPKNAL
Sbjct: 283 EGELLRQAEPEDLIKFGLIPEFIGRLPVVTTLTELNQEALIKILKEPKNAL 333
>gi|301299297|ref|ZP_07205583.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|300853141|gb|EFK80739.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Lactobacillus
salivarius ACS-116-V-Col5a]
Length = 408
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 163/291 (56%), Positives = 214/291 (73%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++PTP EI L+++V+GQE+AKK L+VAVYNHYKR+ A++ +DD
Sbjct: 60 NVPTPHEIVDTLNQYVVGQEEAKKTLAVAVYNHYKRV---------------NASLSDDD 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
EL+KSN+ L+GPTGSGKT LA+ LAR +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 105 GTELQKSNICLVGPTGSGKTFLAQNLARILNVPFAIADATTLTEAGYVGEDVENILLKLL 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE AQ+G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 165 QNADYDVERAQRGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFI GGAF +E + R D +IGFG +
Sbjct: 225 GRKHPQQEFIQIDTTNILFIVGGAFDGIETMVKNRLGDKTIGFGVDSKQEYDPD------ 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL++ + DL+ +GLIPEF+GR PIL +L LTE+ LV++LTEPKNAL
Sbjct: 279 -KSLMQQIIPEDLLKFGLIPEFIGRLPILTALEKLTEEDLVRILTEPKNAL 328
>gi|312792982|ref|YP_004025905.1| ATP-dependent clp protease, ATP-binding subunit clpx
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180122|gb|ADQ40292.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Caldicellulosiruptor kristjanssonii 177R1B]
Length = 433
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/290 (55%), Positives = 221/290 (76%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI + LD +V+GQ+ AKK+LSVAVYNHYKRIY+ + KK D+
Sbjct: 61 LPTPKEIKEFLDLYVVGQDHAKKILSVAVYNHYKRIYYHDTKK---------------DD 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 106 VELQKSNILMLGPTGSGKTYLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRLIQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G++YIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 166 NADYDIERAERGIIYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF +EK I +R + ++GF A + + + D
Sbjct: 226 RKHPHQEFIQIDTTNILFICGGAFEGIEKIIEKRIGEKTLGFNAKIESKKEKKIGD---- 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L + DL+ +G+IPEF+GR PI+V+L AL ++ L+K+LTEPKNAL
Sbjct: 282 --ILRQIMPQDLLKFGMIPEFIGRVPIIVTLDALDKEALIKILTEPKNAL 329
>gi|227529061|ref|ZP_03959110.1| ATP-dependent protease ATP-binding subunit [Lactobacillus vaginalis
ATCC 49540]
gi|227351073|gb|EEJ41364.1| ATP-dependent protease ATP-binding subunit [Lactobacillus vaginalis
ATCC 49540]
Length = 417
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 217/290 (74%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ AKK LSVAVYNHYKR+ A ++++
Sbjct: 61 VPTPEEIMSKLDDYVIGQSDAKKTLSVAVYNHYKRV--------------NAMTTGDNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
EL+KSN+ ++GPTGSGKT LA++LAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 TELQKSNIAVIGPTGSGKTYLAQSLARILNVPFAIADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A F+VEAA++G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 167 AANFDVEAAEKGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DTK+ILFI GGAF +E + ER D +IGFG ++ A VT+
Sbjct: 227 RKHPQQEFIQVDTKNILFIVGGAFDGIETIVKERLGDKTIGFGT--NSDEAANVTE---- 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++L+ V DL+ +GLIPEF+GR P++ +L L ED LV++LTEPKNAL
Sbjct: 281 KNILQHVIPEDLLKFGLIPEFIGRLPVMTALQKLDEDDLVRILTEPKNAL 330
>gi|226706596|sp|B8CRF6.1|CLPX_SHEPW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|212557510|gb|ACJ29964.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
piezotolerans WP3]
Length = 423
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQ+KAKKVLSVAVYNHYKR+ +A+ PK D
Sbjct: 63 LPTPHELRAHLDDYVIGQDKAKKVLSVAVYNHYKRLKNAS--------PK--------DG 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELGKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 167 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILF+CGGAF LEK I +R + IGFGA V+ G D A
Sbjct: 227 RKHPQQEFLQVDTSKILFVCGGAFAGLEKVIEQRSHVGTGIGFGAEVK-----GEADKAT 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE DL+ +GLIPEF+GR P+L +L L + L+++L+EPKNA+
Sbjct: 282 ISDTLLQVEPEDLVKFGLIPEFIGRLPVLATLAELDDAALIQILSEPKNAI 332
>gi|402549259|ref|ZP_10846112.1| ATP-dependent protease ATP-binding subunit ClpX [SAR86 cluster
bacterium SAR86C]
Length = 366
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/292 (57%), Positives = 221/292 (75%), Gaps = 21/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LP+P EI LD++VIGQE AKKVLSVAVYNHYKR+ N K
Sbjct: 58 DELPSPLEIFNKLDEYVIGQESAKKVLSVAVYNHYKRLRKNNAK---------------- 101
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL+KSNVLL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 102 DTVELQKSNVLLLGPTGSGKTLLAQTLAKILNVPFTIADATTLTEAGYVGEDVENIIQKL 161
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L +++++ E AQ G+VYIDE+DKI +K+++ +I+RDVSGEGVQQALLK++EGT+ ++P +
Sbjct: 162 LQKSDYDPERAQLGIVYIDEIDKIARKSDNPSITRDVSGEGVQQALLKLIEGTVASIPPQ 221
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + IQ+DT +ILFICGGAF L+K I +R + IGFGA V N ++ V
Sbjct: 222 GGRKHPQQEFIQIDTSNILFICGGAFSGLDKVIDQRNSNIGIGFGAEV--NKKSNVL--P 277
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+TS+ ++ +E DL+ YGLIPEFVGR P++ SL L E LV++L EPKNAL
Sbjct: 278 ITSN-VDDLEPEDLVKYGLIPEFVGRLPVISSLHELDEHALVRILKEPKNAL 328
>gi|158321198|ref|YP_001513705.1| ATP-dependent protease ATP-binding subunit ClpX [Alkaliphilus
oremlandii OhILAs]
gi|229889849|sp|A8MIS7.1|CLPX_ALKOO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|158141397|gb|ABW19709.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Alkaliphilus
oremlandii OhILAs]
Length = 426
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 219/291 (75%), Gaps = 21/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP P EI LD++VIGQEKAKK L+VAVYNHYKRI ++K G
Sbjct: 59 DLPKPSEIKDILDQYVIGQEKAKKALAVAVYNHYKRINVEDVKSG--------------- 103
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+L++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 104 DVELQKSNILMLGPTGSGKTLLAQTLAKIINVPFAIADATSLTEAGYVGEDVENILLKLI 163
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 QAADYDIERAEKGIIYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFI GGAF ++ I +R S+GFGA + + V D
Sbjct: 224 GRKHPHQEFIQIDTTNILFIVGGAFDGIDSIIQKRTSKKSMGFGAEIESKQ---VLDLG- 279
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SLL+ ++ DL+ +GLIPEFVGR P++V+L L E+ L+K+LTEPKNAL
Sbjct: 280 --SLLKQIQPEDLLKFGLIPEFVGRLPVVVTLEQLDEEALIKILTEPKNAL 328
>gi|409394840|ref|ZP_11245987.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
Chol1]
gi|409120489|gb|EKM96833.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
Chol1]
Length = 426
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 213/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKK+L+VAVYNHYKR+ D +
Sbjct: 65 LPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRLNQR----------------DKKEE 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ A
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFAGLEKVIQARSTRGGIGFSAEVRSKDPGKKIGEA-- 286
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L SVE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL
Sbjct: 287 ---LRSVEPDDLVKFGLIPEFVGRLPVIATLDELDEPALIQILTEPKNAL 333
>gi|420334605|ref|ZP_14836227.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-315]
gi|391268296|gb|EIQ27224.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-315]
Length = 424
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGAKVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|194595679|gb|ACF77122.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum
brasilense]
Length = 422
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 163/290 (56%), Positives = 218/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I LD +VIGQ AK+VLSVAV+NHYKR+ H ++
Sbjct: 63 VPTPRDIHAVLDDYVIGQHHAKRVLSVAVHNHYKRLAHGT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I++R + +SIGFGA VR D T
Sbjct: 227 RKHPQQEFLQVDTSNILFICGGAFAGLDKIIAQRGKGTSIGFGADVRG------PDERST 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL+ +GLIPEF+GR P++ +L+ L E LV++LT+PKNAL
Sbjct: 281 GDILREVEPEDLLKFGLIPEFIGRLPVVATLSDLDETALVEILTKPKNAL 330
>gi|357059571|ref|ZP_09120413.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Selenomonas
infelix ATCC 43532]
gi|355371648|gb|EHG18992.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Selenomonas
infelix ATCC 43532]
Length = 421
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/292 (56%), Positives = 223/292 (76%), Gaps = 21/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+D+P PKEI LD++VIGQ++AKK LSVAVYNHYKRI N+ +G +
Sbjct: 59 KDVPKPKEIRHILDQYVIGQDEAKKSLSVAVYNHYKRI---NVGQG------------KN 103
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++VEL+KSN+L++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct: 104 EDVELKKSNILMIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
+ A++++E AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT +VP +
Sbjct: 164 IQAADYDIEKAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQ 223
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF +E+ I R +GFGA VR+ R V ++
Sbjct: 224 GGRKHPQQELLQIDTTNILFICGGAFDGIEEIIESRLGKKQMGFGAEVRSKKRVSVGES- 282
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L V S DL+ GLIPEF+GR P++V+L +L E+ LV++LTEPKNAL
Sbjct: 283 -----LSKVISEDLMKNGLIPEFIGRLPVVVTLNSLDENALVQILTEPKNAL 329
>gi|381199611|ref|ZP_09906758.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingobium
yanoikuyae XLDN2-5]
Length = 422
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 221/306 (72%), Gaps = 28/306 (9%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
GG G + GG +PTP+EIC LD +VIGQ++AK+VLSVAV+NHYKR+ H
Sbjct: 54 GGLVGKKDGG------VPTPQEICDVLDDYVIGQKRAKRVLSVAVHNHYKRLNH------ 101
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
G++P VEL KSN+LL+GPTG GKTLLA+TLA+ +VPF +ADATTLT+A
Sbjct: 102 -GSKP---------GEVELAKSNILLVGPTGCGKTLLAQTLAKTFDVPFTMADATTLTEA 151
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL +++NVE AQ+G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQAL
Sbjct: 152 GYVGEDVENIILKLLQASDYNVEKAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQAL 211
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I +R + SIGFGA
Sbjct: 212 LKLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIGDRLEAKSIGFGA 271
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V A + T LL E DL+ +GLIPEFVGR P++ +L L LVK+L
Sbjct: 272 HVAA------PEERKTGELLRQSEPEDLLKFGLIPEFVGRLPVIATLEDLDVTALVKILV 325
Query: 545 EPKNAL 550
EPKNAL
Sbjct: 326 EPKNAL 331
>gi|289577855|ref|YP_003476482.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermoanaerobacter italicus Ab9]
gi|289527568|gb|ADD01920.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter italicus Ab9]
Length = 424
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP PKEI + LD++VIGQEKAKK L+VAVYNHYKRI S +P D
Sbjct: 59 ELPKPKEIKEFLDQYVIGQEKAKKALAVAVYNHYKRI-------NSRLKP---------D 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 103 DVELQKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 163 QAADYDIEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF LEK I R ++GFG+ V++ +
Sbjct: 223 GRKHPHQEFIQIDTTNILFICGGAFEGLEKIIESRIGKKTLGFGSDVQSRKEKNI----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L + DL+ +G+IPEF+GR PI+V+L L ++ LV++LTEPKNAL
Sbjct: 278 -GEILSHIMPEDLLKFGMIPEFIGRVPIVVTLDPLDKEDLVRILTEPKNAL 327
>gi|260589156|ref|ZP_05855069.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Blautia
hansenii DSM 20583]
gi|260540576|gb|EEX21145.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Blautia
hansenii DSM 20583]
Length = 456
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 220/291 (75%), Gaps = 23/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+L P+EI + LD++VIGQ++AKKVLSVAVYNHYKR+ SG +
Sbjct: 83 NLLKPQEIKEILDEYVIGQDEAKKVLSVAVYNHYKRVL-------SGG----------NT 125
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+L++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL K++
Sbjct: 126 DVELQKSNILMLGPTGSGKTLLAQTLARLLNVPFAIADATTLTEAGYVGEDVENILLKII 185
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E AQ G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 186 QAADYDIERAQYGIIYIDEIDKITRKSENASITRDVSGEGVQQALLKIVEGTVASVPPQG 245
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF L+K I R+ +IGF A V+ V
Sbjct: 246 GRKHPQQEFIQIDTTNILFICGGAFEGLDKIIETRKDTKAIGFNAQVQTKEEKNV----- 300
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL+ V DL+ +GLIPEFVGR P++VSL AL ++ LVK+LTEPKN+L
Sbjct: 301 -GELLKEVMPQDLVKFGLIPEFVGRVPVVVSLNALDKNALVKILTEPKNSL 350
>gi|432415390|ref|ZP_19658021.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE44]
gi|430943766|gb|ELC63872.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE44]
Length = 424
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|147677140|ref|YP_001211355.1| ATP-dependent protease ATP-binding subunit ClpX [Pelotomaculum
thermopropionicum SI]
gi|146273237|dbj|BAF58986.1| ATP-dependent protease Clp, ATPase subunit [Pelotomaculum
thermopropionicum SI]
Length = 427
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 220/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+P PKEI + LD++VIGQE AKK L+VAVYNHYKRI NL G + D
Sbjct: 68 DIPKPKEIKEILDQYVIGQESAKKSLAVAVYNHYKRI---NL----GGKI---------D 111
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN++++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 112 DVELQKSNIVMLGPTGSGKTLLAQTLARLLNVPFAIADATSLTEAGYVGEDVENILLKLI 171
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 172 QAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 231
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF +EK I R ++GFGA ++A +
Sbjct: 232 GRKHPHQEFIQLDTTNILFICGGAFDGIEKIIMNRIGKKAMGFGAEIKARKELKI----- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L + DL+ YGLIPEFVGR PI+V+L AL E+ L+++LTEP+NAL
Sbjct: 287 -GEILSKILPEDLLKYGLIPEFVGRLPIIVTLDALDEEALIRILTEPRNAL 336
>gi|258646881|ref|ZP_05734350.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dialister
invisus DSM 15470]
gi|260404320|gb|EEW97867.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dialister
invisus DSM 15470]
Length = 412
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/291 (54%), Positives = 221/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP++I + +D++VI Q+ AK L+VAVYNHYKRI + +DD
Sbjct: 61 ELPTPEKIKEYMDQYVIEQDDAKVALAVAVYNHYKRIRYEK----------------DDD 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL+KSN++++GPTGSGKTLLA+TLAR +NVPF I+DATTLT+AGYVGEDVE+IL +L+
Sbjct: 105 GVELQKSNIIMLGPTGSGKTLLAQTLARFLNVPFAISDATTLTEAGYVGEDVENILLRLI 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E AQ+G+VYIDE+DKI KK+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 165 QAADYDLERAQRGIVYIDEIDKIAKKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF ++K I+ R S++GFGA ++ D
Sbjct: 225 GRKHPNQEMIQLDTSNILFICGGAFAGIDKVIARRTTRSTMGFGADIKK------ADEKD 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +L++VE DL+ +GLIPEF+GR P++V+L L E+ L+++L+EPKNAL
Sbjct: 279 IAEVLQNVEPEDLLKFGLIPEFIGRLPVIVALHPLKEEALIRILSEPKNAL 329
>gi|418019488|ref|ZP_12658968.1| endopeptidase Clp ATP-binding regulatory subunit (clpX) [Candidatus
Regiella insecticola R5.15]
gi|347605155|gb|EGY29641.1| endopeptidase Clp ATP-binding regulatory subunit (clpX) [Candidatus
Regiella insecticola R5.15]
Length = 423
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 217/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKK L+VAVYNHYKR+ + D+++
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKALAVAVYNHYKRLCNG----------------DSNNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ ++NVE AQ+G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 168 KCDYNVEKAQRGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTIAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS+R + IGFGA V++ V +
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRLNTGTGIGFGAIVKS-----VCEKPS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL E DLI +GLIPEF+GR P++ +LT L ++ L+K+L EPKNAL
Sbjct: 283 EGELLRQAEPEDLIKFGLIPEFIGRLPVVTTLTELNQEALIKILKEPKNAL 333
>gi|333897650|ref|YP_004471524.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermoanaerobacterium xylanolyticum LX-11]
gi|390934516|ref|YP_006392021.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|333112915|gb|AEF17852.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermoanaerobacterium xylanolyticum LX-11]
gi|389570017|gb|AFK86422.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 424
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 163/291 (56%), Positives = 222/291 (76%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP PKEI + LD++VIGQ+KAKK L+VAVYNHYKRI ++ +K D
Sbjct: 59 ELPKPKEIKEFLDQYVIGQDKAKKALAVAVYNHYKRI-NSRVK---------------SD 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+L++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 103 DVELQKSNILMLGPTGSGKTLLAQTLARMLNVPFAIADATSLTEAGYVGEDVENILLKLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G+VYIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 163 QAADYDIEKAEKGIVYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTVANVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFI GGAF +EK I R S+GFG+ +++ +
Sbjct: 223 GRKHPHQEFIQIDTTNILFIVGGAFDGIEKIIESRIGKKSLGFGSEIQSKQEKKI----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L+++ DL+ +GLIPEF+GR PI+V+L +L +D L+++LTEPKNAL
Sbjct: 278 -GEILKNIMPEDLLKFGLIPEFIGRLPIVVTLDSLDKDALIRILTEPKNAL 327
>gi|421464270|ref|ZP_15912960.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens WC-A-157]
gi|400205023|gb|EJO36004.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens WC-A-157]
Length = 438
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/290 (55%), Positives = 218/290 (75%), Gaps = 17/290 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ K S KT +D
Sbjct: 60 LPKPHEIRAALDQYVIGQDIAKKTLSVAVYNHYKRL------KVSQNGQKT------EDK 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A++++E AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 168 KADYDIEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT ++LFICGGAF LEK + R++ IGF A V++ +
Sbjct: 228 RKHPQQEFIQVDTSNVLFICGGAFSGLEKIVQHRQEKGGIGFTAEVKSK-----DETKKL 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE +DL+ +GLIPEF+GR P++ +L L ED L+++L EPKNAL
Sbjct: 283 AELFRQVEPADLVKFGLIPEFIGRLPVIATLEELDEDALMQILIEPKNAL 332
>gi|427407871|ref|ZP_18898073.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sphingobium
yanoikuyae ATCC 51230]
gi|425713834|gb|EKU76846.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sphingobium
yanoikuyae ATCC 51230]
Length = 422
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 221/306 (72%), Gaps = 28/306 (9%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
GG G + GG +PTP+EIC LD +VIGQ++AK+VLSVAV+NHYKR+ H
Sbjct: 54 GGLVGKKDGG------VPTPQEICDVLDDYVIGQKRAKRVLSVAVHNHYKRLNH------ 101
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
G++P VEL KSN+LL+GPTG GKTLLA+TLA+ +VPF +ADATTLT+A
Sbjct: 102 -GSKP---------GEVELAKSNILLVGPTGCGKTLLAQTLAKTFDVPFTMADATTLTEA 151
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL +++NVE AQ+G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQAL
Sbjct: 152 GYVGEDVENIILKLLQASDYNVEKAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQAL 211
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I +R + SIGFGA
Sbjct: 212 LKLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIGDRLEAKSIGFGA 271
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V A + T LL E DL+ +GLIPEFVGR P++ +L L LVK+L
Sbjct: 272 HVAA------PEERKTGELLRQSEPEDLLKFGLIPEFVGRLPVIATLEDLDVTALVKILV 325
Query: 545 EPKNAL 550
EPKNAL
Sbjct: 326 EPKNAL 331
>gi|161609274|ref|NP_888798.2| ATP-dependent protease ATP-binding protein ClpX [Bordetella
bronchiseptica RB50]
gi|161610395|ref|NP_884266.2| ATP-dependent protease ATP-binding subunit ClpX [Bordetella
parapertussis 12822]
gi|46576487|sp|Q7W8X1.2|CLPX_BORPA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|46576495|sp|Q7WK82.2|CLPX_BORBR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
Length = 434
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 211/291 (72%), Gaps = 21/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI LD++VIGQ K++L+VAVYNHYKRI H +K D
Sbjct: 63 ELPTPAEIKTFLDQYVIGQTSPKRMLAVAVYNHYKRIRHGEIK---------------GD 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN++L+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 EVELSKSNIMLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+ ++YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYDVEKAQRAIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFI GGAF LEK I +R + S IGF A VRA GV +
Sbjct: 228 GRKHPNQDFVQVDTTNILFIVGGAFDGLEKVIRDRTEKSGIGFSAAVRAKSERGVGE--- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L E DLI +GLIPE VGR P++ +L L E LV++LTEPKNAL
Sbjct: 285 ---LFSEAEPEDLIKFGLIPELVGRLPVVATLDELDEAALVQILTEPKNAL 332
>gi|189024263|ref|YP_001935031.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella abortus
S19]
gi|260546575|ref|ZP_05822314.1| ATP-dependent protease ATP-binding subunit [Brucella abortus NCTC
8038]
gi|238689370|sp|B2S5W0.1|CLPX_BRUA1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|189019835|gb|ACD72557.1| ATP-dependent protease ATP-binding subunit [Brucella abortus S19]
gi|260095625|gb|EEW79502.1| ATP-dependent protease ATP-binding subunit [Brucella abortus NCTC
8038]
Length = 424
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/292 (55%), Positives = 219/292 (75%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF++ADATTLTQAGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFIMADATTLTQAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL
Sbjct: 281 RIGEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNAL 332
>gi|419955541|ref|ZP_14471668.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri TS44]
gi|387967711|gb|EIK52009.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri TS44]
Length = 426
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 213/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKK+L+VAVYNHYKR+ D +
Sbjct: 65 LPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRLNQR----------------DKKEE 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ A
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFAGLEKVIQARSTRGGIGFSAEVRSKDPGKKIGEA-- 286
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L SVE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL
Sbjct: 287 ---LRSVEPDDLVRFGLIPEFVGRLPVIATLDELDEPALIQILTEPKNAL 333
>gi|91205314|ref|YP_537669.1| ATP-dependent protease ATP-binding subunit ClpX [Rickettsia bellii
RML369-C]
gi|122425788|sp|Q1RJ84.1|CLPX_RICBR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91068858|gb|ABE04580.1| ATP-dependent clp protease ATP-binding subunit ClpX [Rickettsia
bellii RML369-C]
Length = 427
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/301 (53%), Positives = 223/301 (74%), Gaps = 21/301 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
S+ + +PTP++IC L+ +V+GQE+AKKVL+VAVYNHYKR+ + SG
Sbjct: 49 SKIALKQITYTIPTPQKICSVLNDYVVGQEQAKKVLAVAVYNHYKRLEYVQ----SG--- 101
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+++VEL KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADAT+LT+AGYVGE
Sbjct: 102 --------NNDVELNKSNILLIGPTGSGKTLLAQTLAKILDVPFTMADATSLTEAGYVGE 153
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+IL +LL AEFNV AQ+G++YIDEVDKI +K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 154 DVENILLRLLQAAEFNVAKAQKGIIYIDEVDKIARKSENPSITRDVSGEGVQQALLKIME 213
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ D +Q+DT +ILFICGGAF+ ++ I+ R +SSIGF A V
Sbjct: 214 GTVASVPPQGGRKHPQQDFVQLDTSNILFICGGAFMGIDSIITSRTNNSSIGFAANV--- 270
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
+ + +L+S+E DL +GLIPEF+GR PI+ +L L ++ LV +LT+PKNA
Sbjct: 271 ---NIDKEKINREILKSLEIEDLTKFGLIPEFIGRLPIVTTLDDLDKEALVTILTKPKNA 327
Query: 550 L 550
+
Sbjct: 328 I 328
>gi|421540622|ref|ZP_15986767.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 93004]
gi|402318776|gb|EJU54292.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 93004]
Length = 414
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 212/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK A N
Sbjct: 64 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKAGA------N 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 108 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I R + IGFGA V + + A
Sbjct: 228 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRRRTEKGGIGFGASVHSK-----DENADI 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL
Sbjct: 283 TKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNAL 332
>gi|269914470|pdb|3HTE|A Chain A, Crystal Structure Of Nucleotide-Free Hexameric Clpx
gi|269914471|pdb|3HTE|B Chain B, Crystal Structure Of Nucleotide-Free Hexameric Clpx
gi|269914472|pdb|3HTE|C Chain C, Crystal Structure Of Nucleotide-Free Hexameric Clpx
gi|269914473|pdb|3HTE|D Chain D, Crystal Structure Of Nucleotide-Free Hexameric Clpx
gi|269914474|pdb|3HTE|E Chain E, Crystal Structure Of Nucleotide-Free Hexameric Clpx
gi|269914475|pdb|3HTE|F Chain F, Crystal Structure Of Nucleotide-Free Hexameric Clpx
Length = 363
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 3 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 46
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 47 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 106
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYID++DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 107 KCDYDVQKAQRGIVYIDQIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 166
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 167 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 221
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 222 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 272
>gi|421662138|ref|ZP_16102306.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC110]
gi|421693925|ref|ZP_16133557.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-692]
gi|404569764|gb|EKA74849.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-692]
gi|408714941|gb|EKL60071.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC110]
Length = 437
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 219/291 (75%), Gaps = 20/291 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG-SGAEPKTAAAVDNDD 319
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G SG K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKR-----LKVGQSGHASK--------- 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 166 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ +
Sbjct: 226 GRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNK-----DETKK 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE +DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 281 LAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNAL 331
>gi|269914476|pdb|3HWS|A Chain A, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
gi|269914477|pdb|3HWS|B Chain B, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
gi|269914478|pdb|3HWS|C Chain C, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
gi|269914479|pdb|3HWS|D Chain D, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
gi|269914480|pdb|3HWS|E Chain E, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
gi|269914481|pdb|3HWS|F Chain F, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
Length = 363
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 3 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 46
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 47 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 106
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYID++DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 107 KCDYDVQKAQRGIVYIDQIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 166
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 167 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 221
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 222 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 272
>gi|317050718|ref|YP_004111834.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Desulfurispirillum indicum S5]
gi|316945802|gb|ADU65278.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Desulfurispirillum indicum S5]
Length = 429
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 213/290 (73%), Gaps = 17/290 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI + LD++VIGQE++KK+LSVAVYNHYKRIY +L GAE ++
Sbjct: 70 LPRPSEIKESLDEYVIGQERSKKILSVAVYNHYKRIY--SLLDSRGAE---------GED 118
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 119 VEISKSNILLIGPTGSGKTLLAQTLARVLNVPFAIADATTLTEAGYVGEDVENILLKLLQ 178
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+F+VE AQ+G++YIDE+DKI++K+E+++I+RDVSGEGVQQALLK++EGT+ NVP KG
Sbjct: 179 SCDFDVERAQRGIIYIDEIDKISRKSENVSITRDVSGEGVQQALLKIVEGTVANVPPKGG 238
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF L+ + R +GFG + N +
Sbjct: 239 RKHPNQEFIQIDTTNILFICGGAFEGLDGIVGRRLGKKMLGFGQELSENRKLQ------K 292
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL V D+I YGLIPE VGR P++ +L L E L+++L EPKNAL
Sbjct: 293 DELLAKVHPEDIIRYGLIPELVGRLPVIAALEELNEAALIQILQEPKNAL 342
>gi|254785726|ref|YP_003073155.1| ATP-dependent protease ATP-binding subunit ClpX [Teredinibacter
turnerae T7901]
gi|259491270|sp|C5BTX7.1|CLPX_TERTT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|237687270|gb|ACR14534.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Teredinibacter turnerae T7901]
Length = 429
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 220/293 (75%), Gaps = 18/293 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ LP P +I LD++VIGQ+ AKKVL+VAVYNHYKR+ + KKG
Sbjct: 63 GDKLPVPIDISATLDEYVIGQQDAKKVLAVAVYNHYKRLRVGDKKKGK------------ 110
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 111 -DEVELGKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 169
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP
Sbjct: 170 LLQKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPP 229
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP+ + +Q+DT +ILFICGGAF L+K I +R + IGF A V++ + G +
Sbjct: 230 QGGRKHPQQEFLQVDTSNILFICGGAFAGLDKIIRDRSEKGGIGFSAEVKS--KDGSKNV 287
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T L+ +E DL+ YGLIPEFVGR P++ +L L ++ LV +L EPKN+L
Sbjct: 288 GET---LKDLEPEDLVRYGLIPEFVGRLPVIATLDELDKEALVTILREPKNSL 337
>gi|423118964|ref|ZP_17106648.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5246]
gi|376399610|gb|EHT12224.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5246]
Length = 424
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEPAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|373455366|ref|ZP_09547202.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Dialister
succinatiphilus YIT 11850]
gi|371935006|gb|EHO62779.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Dialister
succinatiphilus YIT 11850]
Length = 411
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 160/290 (55%), Positives = 215/290 (74%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+EI K +D++VI Q+ AK L+VAVYNHYKRI H DD+
Sbjct: 61 LPTPEEIKKYMDQYVIEQDDAKMALAVAVYNHYKRIEHEG----------------EDDD 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN++++GPTGSGKTLLA+TLAR ++VPF I+DATTLT+AGYVGEDVE+IL +L+
Sbjct: 105 VELQKSNIIMLGPTGSGKTLLAQTLARFLDVPFAISDATTLTEAGYVGEDVENILLRLIQ 164
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++++ A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 165 AADYDIDKAERGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 224
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF ++K I R S +GFGA + D
Sbjct: 225 RKHPNQEMIQIDTTNILFICGGAFAGIDKVIDRRLTKSVMGFGADIEKK------DDRDM 278
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ LL+ V+ DL+ +GLIPEF+GR P++V L L E+ LVK+LTEPKNAL
Sbjct: 279 AELLQQVQPEDLLKFGLIPEFIGRLPVIVPLHPLNEEALVKILTEPKNAL 328
>gi|71276512|ref|ZP_00652787.1| ClpX, ATPase regulatory subunit [Xylella fastidiosa Dixon]
gi|170729733|ref|YP_001775166.1| ATP-dependent protease ATP-binding subunit ClpX [Xylella fastidiosa
M12]
gi|238687959|sp|B0U5N2.1|CLPX_XYLFM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|71162689|gb|EAO12416.1| ClpX, ATPase regulatory subunit [Xylella fastidiosa Dixon]
gi|167964526|gb|ACA11536.1| ATP-dependent Clp protease ATP binding subunit Clpx [Xylella
fastidiosa M12]
Length = 426
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI + LD++VIGQ++AK+ L+VAVYNHYKRI + +D+
Sbjct: 66 LPKPKEILEVLDQYVIGQQRAKRTLAVAVYNHYKRIESRH----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQHGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R ++ IGFG V+++
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRCTEAGGIGFGVKVKSS-----ESKRD 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPEFVGR P++ +L L E LVK+LTEPKNA+
Sbjct: 285 VGKVLAGVEPEDLIKFGLIPEFVGRLPVVATLDELDESALVKILTEPKNAI 335
>gi|374705739|ref|ZP_09712609.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
S9]
Length = 427
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K D+
Sbjct: 65 LPAPKEISAILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKS---------------DD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA-NMRAGVTDAAV 499
RKHP+ + +Q+DT+ ILFICGGAF LEK I R + IGF A VR+ ++ + ++
Sbjct: 230 RKHPQQEFLQVDTRSILFICGGAFSGLEKVIQGRSEKGGIGFNAQVRSKDLGKKIGES-- 287
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L +VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL
Sbjct: 288 ----LRNVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNAL 334
>gi|114707245|ref|ZP_01440143.1| ATP-dependent protease ATP-binding subunit [Fulvimarina pelagi
HTCC2506]
gi|114537441|gb|EAU40567.1| ATP-dependent protease ATP-binding subunit [Fulvimarina pelagi
HTCC2506]
Length = 422
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 217/290 (74%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P+EI LD +VIGQ AKKVLSVAV+NHYKR+ HA+ +++
Sbjct: 63 VPSPQEIIAVLDDYVIGQAYAKKVLSVAVHNHYKRLAHAS----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L++ IS+R + +SIGF A V A D +
Sbjct: 227 RKHPQQEFLQVDTANILFICGGAFAGLDRIISDRGRKTSIGFAANVEA------PDERKS 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE DL+ +GLIPEFVGR P+L +L L E LV++L EPKNAL
Sbjct: 281 GELFRQVEPEDLLKFGLIPEFVGRLPVLATLEDLDEAALVQILREPKNAL 330
>gi|374623545|ref|ZP_09696053.1| ATP-dependent protease ATP-binding subunit ClpX [Ectothiorhodospira
sp. PHS-1]
gi|373942654|gb|EHQ53199.1| ATP-dependent protease ATP-binding subunit ClpX [Ectothiorhodospira
sp. PHS-1]
Length = 424
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 170/298 (57%), Positives = 221/298 (74%), Gaps = 23/298 (7%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
G+ G LP P EI + LD++VIGQE+AKK+LSVAVYNHYKR+
Sbjct: 58 GAVAGSKLPRPHEIKQILDEYVIGQERAKKILSVAVYNHYKRL----------------E 101
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
A D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+
Sbjct: 102 ARGGKDEVELAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVEN 161
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
I+ KLL + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 162 IIQKLLQKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVA 221
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 493
+VP +G RKHP+ + +Q+DT++ILFI GGAF LEK I +R + IGF A V++
Sbjct: 222 SVPPQGGRKHPQQEFLQVDTRNILFIVGGAFAGLEKVIRDRTEKGGIGFSAEVKSR---- 277
Query: 494 VTDAAVTSS-LLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
D+ +S+ LL VE DLI +GLIPEFVGR P++ +L L E LV++LTEPKNAL
Sbjct: 278 --DSGQSSTQLLFGVEPEDLIKFGLIPEFVGRLPLVATLEELDEAALVRILTEPKNAL 333
>gi|392382085|ref|YP_005031282.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum
brasilense Sp245]
gi|356877050|emb|CCC97851.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum
brasilense Sp245]
Length = 422
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 163/290 (56%), Positives = 217/290 (74%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I LD +VIGQ AK+VLSVAV+NHYKR+ H ++
Sbjct: 63 VPTPRDIHAVLDDYVIGQHHAKRVLSVAVHNHYKRLAHGT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I++R + +SIGFGA VR D T
Sbjct: 227 RKHPQQEFLQVDTSNILFICGGAFAGLDKIIAQRGKGTSIGFGADVRG------PDERST 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL+ +GLIPEF+GR P++ +L L E LV++LT+PKNAL
Sbjct: 281 GDILREVEPEDLLKFGLIPEFIGRLPVVATLADLDESALVEILTKPKNAL 330
>gi|254780271|ref|YP_003064684.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus
Liberibacter asiaticus str. psy62]
gi|254039948|gb|ACT56744.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus
Liberibacter asiaticus str. psy62]
Length = 424
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 162/292 (55%), Positives = 221/292 (75%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI + LD++VIGQ +AKKVL+VAV+NHYKR+ H++
Sbjct: 63 EGIPNPQEILRVLDEYVIGQGQAKKVLAVAVHNHYKRLAHSS----------------KS 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
NVEL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SNVELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGF A V+ +D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKASIGFSAVVKD------SDNR 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L ++ES DL+ +GLIPEF+GR P+L +L L E+ L+++L+EPKNAL
Sbjct: 281 PVGEVLRNLESEDLVKFGLIPEFIGRLPVLATLEDLDENSLIRILSEPKNAL 332
>gi|271499598|ref|YP_003332623.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dickeya
dadantii Ech586]
gi|270343153|gb|ACZ75918.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dickeya
dadantii Ech586]
Length = 424
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 221/292 (75%), Gaps = 24/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + LD +VIGQE+AKKVL+VAVYNHYKR+ ++ D+++
Sbjct: 64 LPTPHEIRRHLDDYVIGQEQAKKVLAVAVYNHYKRLRNS----------------DSNNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS--SIGFGAPVRANMRAGVTDAA 498
RKHP+ + +Q+DT ILFICGGAF L+K I E+R D+ IGF A V+ GV+ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVI-EQRTDTGRGIGFNATVK-----GVSQKA 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L ED L+++L EPKNAL
Sbjct: 282 TEGELLGQVEPGDLIKFGLIPEFIGRLPVVATLKELDEDALIQILREPKNAL 333
>gi|259909251|ref|YP_002649607.1| ATP-dependent protease ATP-binding subunit ClpX [Erwinia pyrifoliae
Ep1/96]
gi|224964873|emb|CAX56395.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Erwinia
pyrifoliae Ep1/96]
Length = 424
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 163/291 (56%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVLSVAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLSVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+T+AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELGKSNILLIGPTGSGKTLLAETMARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K +S+R S IGFGA V++ ++ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVVSQRVDSGSGIGFGASVKSK-----SEKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +LT L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILREPKNAL 333
>gi|89055298|ref|YP_510749.1| ATP-dependent protease ATP-binding subunit ClpX [Jannaschia sp.
CCS1]
gi|122498234|sp|Q28NI8.1|CLPX_JANSC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|88864847|gb|ABD55724.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Jannaschia sp.
CCS1]
Length = 421
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 163/301 (54%), Positives = 221/301 (73%), Gaps = 23/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP+EIC LD +VIGQ AK+VLSVAV+NHYKR+ H++
Sbjct: 52 TKSAGLKSDDGVPTPQEICGVLDDYVIGQAHAKRVLSVAVHNHYKRLNHSD--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN++L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 --------KSDIELAKSNIMLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VR
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRD- 273
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
D+ + +E DL+ +GLIPEFVGR P++ +L L ED LV +LT PKNA
Sbjct: 274 -----PDSKSVGEYFKDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILTGPKNA 328
Query: 550 L 550
L
Sbjct: 329 L 329
>gi|429083885|ref|ZP_19146911.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
condimenti 1330]
gi|426547239|emb|CCJ72952.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
condimenti 1330]
Length = 424
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 217/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQEKAKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEKAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVQAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+ G + A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVK-----GKSQKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+ED L+++L EPKNAL
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEDALIQILKEPKNAL 333
>gi|395232658|ref|ZP_10410908.1| ATP-dependent protease ATP-binding subunit ClpX [Enterobacter sp.
Ag1]
gi|394733060|gb|EJF32699.1| ATP-dependent protease ATP-binding subunit ClpX [Enterobacter sp.
Ag1]
Length = 424
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 220/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ ++ D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRNS----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+A ++ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK-----SEKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L+ L+ED L+++L EPKNAL
Sbjct: 283 EGQLLGQVEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNAL 333
>gi|357633384|ref|ZP_09131262.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Desulfovibrio
sp. FW1012B]
gi|386392768|ref|ZP_10077549.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Desulfovibrio sp. U5L]
gi|357581938|gb|EHJ47271.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Desulfovibrio
sp. FW1012B]
gi|385733646|gb|EIG53844.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Desulfovibrio sp. U5L]
Length = 417
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 167/293 (56%), Positives = 223/293 (76%), Gaps = 21/293 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ LP P EI + LD++VIGQE+AKK+L+VAV+NHYKR+Y+A +GA
Sbjct: 59 GKLLP-PAEIKRLLDEYVIGQEQAKKILAVAVHNHYKRVYYAG---AAGA---------- 104
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VE++KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL +
Sbjct: 105 -DDVEIDKSNILLIGPTGSGKTLLAQTLARILNVPFAIADATTLTEAGYVGEDVENILVQ 163
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL A++++EAA +G++YIDE+DKI +K +S +I+RDVSGEGVQQALLK++EGT N+P
Sbjct: 164 LLQNADYDIEAASKGIIYIDEIDKIARKGDSPSITRDVSGEGVQQALLKIIEGTEANIPP 223
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
KG RKHP+ + I+++T +ILFI GGAF+ LEK + R + +++GFGA V A +
Sbjct: 224 KGGRKHPQQEFIRLNTANILFIVGGAFIGLEKIVGHRMRGTAMGFGAKVEARHDDDM--- 280
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L +DLI +GLIPEF+GR PIL SL LT + LV++LTEPKNAL
Sbjct: 281 ---SRMLSLAHPADLIKFGLIPEFIGRIPILTSLEELTREDLVRILTEPKNAL 330
>gi|253990890|ref|YP_003042246.1| ATP-dependent Clp protease ATP-binding subunit clpX [Photorhabdus
asymbiotica]
gi|253782340|emb|CAQ85504.1| ATP-dependent Clp protease ATP-binding subunit clpX [Photorhabdus
asymbiotica]
Length = 423
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 220/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + LD +VIGQE AKKVL+VAVYNHYKR+ + ++ G
Sbjct: 64 LPTPHEIRQHLDDYVIGQETAKKVLAVAVYNHYKRLRNGDVSNG---------------- 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R S+ IGFGA V+ G ++ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTSTGIGFGAKVK-----GESEKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL E DLI +GLIPEF+GR P++ +L+ L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQAEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILKEPKNAL 333
>gi|268603866|ref|ZP_06138033.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
PID1]
gi|268587997|gb|EEZ52673.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
PID1]
Length = 414
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/317 (54%), Positives = 220/317 (69%), Gaps = 28/317 (8%)
Query: 235 NGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYK 294
G GG+ GG G LPTP EI LD +VIGQ +AKK L+VAVYNHYK
Sbjct: 43 EGDNGGTPPENAGGEPEESGK-----LPTPAEIVANLDDYVIGQGQAKKALAVAVYNHYK 97
Query: 295 RIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFV 354
R+ H PK D VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV
Sbjct: 98 RLRH----------PKA------DGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFV 141
Query: 355 IADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRD 414
+ADATTLT+AGYVGEDVE I+ KLL + +F+VE A+ G+VYIDE+DKI++K+++ +I+RD
Sbjct: 142 MADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKARHGIVYIDEIDKISRKSDNPSITRD 201
Query: 415 VSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER 474
VSGEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R
Sbjct: 202 VSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTANILFICGGAFAGLEKVIRQR 261
Query: 475 RQDSSIGFGAPVRA-NMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTA 533
+ IGFGA V + + AG+T L VE DLI +GLIPE +GR P++ +L
Sbjct: 262 TEKGGIGFGASVHSKDENAGIT------KLFGIVEPEDLIKFGLIPELIGRLPVIATLEE 315
Query: 534 LTEDQLVKVLTEPKNAL 550
L ED L+ +LTEPKNAL
Sbjct: 316 LDEDALINILTEPKNAL 332
>gi|167628598|ref|YP_001679097.1| ATP-dependent protease ATP-binding subunit ClpX [Heliobacterium
modesticaldum Ice1]
gi|238687890|sp|B0TFI7.1|CLPX_HELMI RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167591338|gb|ABZ83086.1| ATP-dependent clp protease, ATP-binding subunit clpx
[Heliobacterium modesticaldum Ice1]
Length = 420
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+P PKEI + LD++VIGQE+AKK LSVAVYNHYKRI NL GS D
Sbjct: 61 DVPKPKEIREILDQYVIGQEQAKKALSVAVYNHYKRI---NL--GSKI-----------D 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
++EL+KSN++++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 105 DIELQKSNIIMLGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKLI 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 165 QAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF +EK I R ++GF A ++ + +
Sbjct: 225 GRKHPHQEFIQLDTTNILFICGGAFDGIEKLIMNRIGKKTMGFNADIKGKQEKKIGET-- 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L + DL+ +GLIPEFVGR P++V+L AL ED LV++LTEPKNAL
Sbjct: 283 ----LREILPVDLLKFGLIPEFVGRLPVIVTLDALDEDALVRILTEPKNAL 329
>gi|114321436|ref|YP_743119.1| ATP-dependent protease ATP-binding subunit ClpX [Alkalilimnicola
ehrlichii MLHE-1]
gi|122311053|sp|Q0A6A8.1|CLPX_ALHEH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|114227830|gb|ABI57629.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Alkalilimnicola ehrlichii MLHE-1]
Length = 425
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/296 (56%), Positives = 216/296 (72%), Gaps = 21/296 (7%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
S+ G LP P EI + LD+FV+GQE AKKVLSVAVYNHYKR L+ GS
Sbjct: 59 SSAGAGLPRPHEINQVLDEFVVGQEHAKKVLSVAVYNHYKR-----LEAGS--------- 104
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I
Sbjct: 105 --RKDEVELSKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENI 162
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
+ KLL + +++VE AQQG+VYIDE+DK+++KA++ +I+RDVSGEGVQQALLK++EGT +
Sbjct: 163 IQKLLQKCDYDVEKAQQGIVYIDEIDKVSRKADNPSITRDVSGEGVQQALLKLIEGTTAS 222
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGF A +++
Sbjct: 223 VPPQGGRKHPQQEFLQVDTGGILFICGGAFAGLDKVIQDRSEKGGIGFSAEIKSK----- 277
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L+ VE DL+ YGLIPEFVGR P++ +L L E LV++L+ PKNAL
Sbjct: 278 DEKRSVGETLQDVEPEDLVKYGLIPEFVGRLPVVATLEELDEQALVEILSAPKNAL 333
>gi|422292887|gb|EKU20188.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Nannochloropsis gaditana CCMP526]
Length = 376
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 162/290 (55%), Positives = 215/290 (74%), Gaps = 23/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P+EIC LD +VIGQ AK+VLSVAV+NHYKR+ + +
Sbjct: 19 VPAPREICNVLDDYVIGQATAKRVLSVAVHNHYKRLNNTG-----------------KSD 61
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL+KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 62 IELQKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 121
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 122 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVAAVPPQGG 181
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + S++GFGA VR V
Sbjct: 182 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISQRGKGSAMGFGADVRNVEERNV------ 235
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + +E DL+ +GLIPEFVGR P++ +L L ED L+ +LT+PKNAL
Sbjct: 236 GEVFKDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALITILTQPKNAL 285
>gi|317047176|ref|YP_004114824.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pantoea sp.
At-9b]
gi|316948793|gb|ADU68268.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pantoea sp.
At-9b]
Length = 423
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQEKAKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEKAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS+R + S IGFGA V+ G + A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRVETGSGIGFGATVK-----GKSQKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILREPKNAL 333
>gi|410420625|ref|YP_006901074.1| ATP-dependent Clp protease ATP-binding subunit [Bordetella
bronchiseptica MO149]
gi|410472788|ref|YP_006896069.1| ATP-dependent Clp protease ATP-binding subunit [Bordetella
parapertussis Bpp5]
gi|412337421|ref|YP_006966176.1| ATP-dependent Clp protease ATP-binding subunit [Bordetella
bronchiseptica 253]
gi|427815118|ref|ZP_18982182.1| ATP-dependent Clp protease ATP-binding subunit [Bordetella
bronchiseptica 1289]
gi|427819400|ref|ZP_18986463.1| ATP-dependent Clp protease ATP-binding subunit [Bordetella
bronchiseptica D445]
gi|427821909|ref|ZP_18988971.1| ATP-dependent Clp protease ATP-binding subunit [Bordetella
bronchiseptica Bbr77]
gi|33573324|emb|CAE37307.1| ATP-dependent Clp protease ATP-binding subunit [Bordetella
parapertussis]
gi|33575673|emb|CAE32751.1| ATP-dependent Clp protease ATP-binding subunit [Bordetella
bronchiseptica RB50]
gi|408442898|emb|CCJ49465.1| ATP-dependent Clp protease ATP-binding subunit [Bordetella
parapertussis Bpp5]
gi|408447920|emb|CCJ59597.1| ATP-dependent Clp protease ATP-binding subunit [Bordetella
bronchiseptica MO149]
gi|408767255|emb|CCJ52001.1| ATP-dependent Clp protease ATP-binding subunit [Bordetella
bronchiseptica 253]
gi|410566118|emb|CCN23678.1| ATP-dependent Clp protease ATP-binding subunit [Bordetella
bronchiseptica 1289]
gi|410570400|emb|CCN18573.1| ATP-dependent Clp protease ATP-binding subunit [Bordetella
bronchiseptica D445]
gi|410587174|emb|CCN02207.1| ATP-dependent Clp protease ATP-binding subunit [Bordetella
bronchiseptica Bbr77]
Length = 453
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 211/291 (72%), Gaps = 21/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI LD++VIGQ K++L+VAVYNHYKRI H +K D
Sbjct: 82 ELPTPAEIKTFLDQYVIGQTSPKRMLAVAVYNHYKRIRHGEIK---------------GD 126
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN++L+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 127 EVELSKSNIMLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGYVGEDVENIIQKLL 186
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+ ++YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 187 QNCNYDVEKAQRAIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 246
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFI GGAF LEK I +R + S IGF A VRA GV +
Sbjct: 247 GRKHPNQDFVQVDTTNILFIVGGAFDGLEKVIRDRTEKSGIGFSAAVRAKSERGVGE--- 303
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L E DLI +GLIPE VGR P++ +L L E LV++LTEPKNAL
Sbjct: 304 ---LFSEAEPEDLIKFGLIPELVGRLPVVATLDELDEAALVQILTEPKNAL 351
>gi|150388890|ref|YP_001318939.1| ATP-dependent protease ATP-binding subunit ClpX [Alkaliphilus
metalliredigens QYMF]
gi|229889848|sp|A6TM62.1|CLPX_ALKMQ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|149948752|gb|ABR47280.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Alkaliphilus
metalliredigens QYMF]
Length = 420
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 163/291 (56%), Positives = 221/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP PKEI L+ +VIGQEKAKK L+VAVYNHYKRI + KT D
Sbjct: 59 DLPKPKEIKDILNGYVIGQEKAKKALAVAVYNHYKRI---------NTDTKT-------D 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN++++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 103 DVELQKSNIMMLGPTGSGKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVENILLKLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDE+DK+ +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 163 QAADYDIEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF +EK I +R +S+GFGA V++ + +
Sbjct: 223 GRKHPHQEFIQIDTTNILFICGGAFDGIEKLIQKRTGKTSMGFGADVKSKVVKDI----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL+ ++ DL+ +GLIPEFVGR P++V+L L E L+++LTEPKNAL
Sbjct: 278 -GGLLKQIQPEDLLKFGLIPEFVGRLPVIVTLDQLDEAALIEILTEPKNAL 327
>gi|442611656|ref|ZP_21026362.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441747584|emb|CCQ12424.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 427
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 164/295 (55%), Positives = 223/295 (75%), Gaps = 24/295 (8%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
+ LPTPKEI LD +VIGQ+ AKKVL+VAVYNHYKR+ + K
Sbjct: 64 ADKLPTPKEIRNHLDDYVIGQDHAKKVLAVAVYNHYKRLRNQETKA-------------- 109
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 110 --DVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 167
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 168 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 227
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVR-ANMRAGVT 495
+G RKHP+ + +Q+DT ILFICGGAF L+K I +R +++ IGFGA V+ A+ + +T
Sbjct: 228 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRSHKNTGIGFGAQVKGADSKQTLT 287
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+A + VE DL+ YGLIPEF+GR P++ +LT L E L+++L+EPKNAL
Sbjct: 288 EA------FQQVEPEDLVKYGLIPEFIGRLPVVATLTELDESALIQILSEPKNAL 336
>gi|422016475|ref|ZP_16363058.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
burhodogranariea DSM 19968]
gi|414092674|gb|EKT54347.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
burhodogranariea DSM 19968]
Length = 425
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 219/291 (75%), Gaps = 21/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + LD +VIGQEKAKKVL+VAVYNHYKR+ + + K +
Sbjct: 64 LPTPHEIREHLDDYVIGQEKAKKVLAVAVYNHYKRLRNGDTTK---------------EG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGF A V+ G ++
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTRSGIGFAAEVK-----GESEKVT 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+LL E DLI +GLIPEF+GR P++ +LT L+E+ L+++L EPKNAL
Sbjct: 284 EGALLAQAEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILKEPKNAL 334
>gi|268684487|ref|ZP_06151349.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
SK-92-679]
gi|268624771|gb|EEZ57171.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
SK-92-679]
Length = 414
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/317 (54%), Positives = 220/317 (69%), Gaps = 28/317 (8%)
Query: 235 NGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYK 294
G GG+ GG G LPTP EI LD +VIGQ +AKK L+VAVYNHYK
Sbjct: 43 EGDNGGTPPENAGGEPEESGK-----LPTPAEIVANLDDYVIGQGQAKKALAVAVYNHYK 97
Query: 295 RIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFV 354
R+ H PK D VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV
Sbjct: 98 RLRH----------PKA------DGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFV 141
Query: 355 IADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRD 414
+ADATTLT+AGYVGEDVE I+ KLL + +F+VE A+ G+VYIDE+DKI++K+++ +I+RD
Sbjct: 142 MADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKARHGIVYIDEIDKISRKSDNPSITRD 201
Query: 415 VSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER 474
VSGEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R
Sbjct: 202 VSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTANILFICGGAFAGLEKVIRQR 261
Query: 475 RQDSSIGFGAPVRA-NMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTA 533
+ IGFGA V + + AG+T L VE DLI +GLIPE +GR P++ +L
Sbjct: 262 TEKGGIGFGASVHSKDENAGIT------KLFGIVEPEDLIKFGLIPELIGRLPVIATLEE 315
Query: 534 LTEDQLVKVLTEPKNAL 550
L ED L+ +LTEPKNAL
Sbjct: 316 LDEDALINILTEPKNAL 332
>gi|301049645|ref|ZP_07196594.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 185-1]
gi|300298582|gb|EFJ54967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 185-1]
Length = 424
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISYRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|15837790|ref|NP_298478.1| ATP-dependent protease ATP-binding subunit ClpX [Xylella fastidiosa
9a5c]
gi|21263488|sp|Q9PE40.1|CLPX_XYLFA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|9106158|gb|AAF83998.1|AE003953_2 ATP-dependent Clp protease ATP binding subunit Clpx [Xylella
fastidiosa 9a5c]
Length = 426
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI + LD++VIGQ++AK+ L+VAVYNHYKRI + +D+
Sbjct: 66 LPKPKEILEVLDQYVIGQQRAKRTLAVAVYNHYKRIESRH----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVERAQHGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R ++ IGFG V+++
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRCTEAGGIGFGVKVKSS-----ESKRD 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPEFVGR P++ +L L E LVK+LTEPKNA+
Sbjct: 285 VGKVLAGVEPEDLIKFGLIPEFVGRLPVVATLDELDESALVKILTEPKNAI 335
>gi|374292311|ref|YP_005039346.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum
lipoferum 4B]
gi|357424250|emb|CBS87117.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum
lipoferum 4B]
Length = 420
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 163/290 (56%), Positives = 218/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I LD +VIGQ AK+VLSVAV+NHYKR+ H ++
Sbjct: 63 VPTPRDIHAVLDDYVIGQSYAKRVLSVAVHNHYKRLAHGT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSIIRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I++R + +SIGFGA VR+ D T
Sbjct: 227 RKHPQQEFLQVDTSNILFICGGAFAGLDKIIAQRGKGTSIGFGADVRS------ADERAT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL+ +GLIPEF+GR P+L +L+ L E LV++L++PKNAL
Sbjct: 281 GEILHEVEPEDLLKFGLIPEFIGRLPVLATLSDLDEGALVEILSKPKNAL 330
>gi|226329067|ref|ZP_03804585.1| hypothetical protein PROPEN_02970 [Proteus penneri ATCC 35198]
gi|225202253|gb|EEG84607.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Proteus
penneri ATCC 35198]
Length = 423
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 167/292 (57%), Positives = 220/292 (75%), Gaps = 22/292 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI K LD +VIGQE AKKVL+VAVYNHYKR L+ G D +
Sbjct: 63 ELPTPHEIRKHLDDYVIGQELAKKVLAVAVYNHYKR-----LRNG-----------DKAN 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++V+ AQ+G+VYIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKITRKSENPSITRDVSGEGVQQALLKLVEGTVASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTDAA 498
RKHP+ + +Q+DT ILFICGGAF L+K +++R S IGFGA V++ + A
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVVAQRLNTHSGIGFGAEVKSQ-----KEKA 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L E+ L+++L EPKNAL
Sbjct: 282 SEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLGELNEEALIQILQEPKNAL 333
>gi|432703010|ref|ZP_19938136.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE171]
gi|431247141|gb|ELF41383.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE171]
Length = 424
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 217/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLNKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|428309358|ref|YP_007120335.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Microcoleus
sp. PCC 7113]
gi|428250970|gb|AFZ16929.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Microcoleus
sp. PCC 7113]
Length = 446
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 163/292 (55%), Positives = 220/292 (75%), Gaps = 18/292 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI K LD++VIGQ++AKKVLSVAVYNHYKR+ G + ++ D++
Sbjct: 80 LPKPIEIKKALDEYVIGQDQAKKVLSVAVYNHYKRL---------GVDSNESSKTTLDES 130
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
V+L KSN+LL+GPTG GKTLLA++LA ++VPF +ADATTLT+AGYVG+DVE+IL +LL
Sbjct: 131 VKLSKSNILLIGPTGCGKTLLAQSLATQLDVPFAVADATTLTEAGYVGDDVENILLRLLQ 190
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+FNVEAA++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+VNVP +G
Sbjct: 191 VADFNVEAAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVVNVPPQGG 250
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGF--GAPVRANMRAGVTDAA 498
RKHP + IQ+DT +ILFICGGAFV L+K + +R SSIGF A V++ +
Sbjct: 251 RKHPYQECIQIDTSNILFICGGAFVGLDKVVEQRIGKSSIGFVQSAEVQSQQKP------ 304
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T+ L + +E DL+ +GLIPE +GR P + S+ L ED L+++LT+P NAL
Sbjct: 305 -TAELFKHLEPEDLVKFGLIPEMIGRLPAITSVEPLDEDALMRILTQPHNAL 355
>gi|339494037|ref|YP_004714330.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
gi|338801409|gb|AEJ05241.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
Length = 426
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 213/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKK+L+VAVYNHYKR+ D +
Sbjct: 65 LPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRLNQR----------------DKKEE 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ A
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFAGLEKVIQSRSTQGGIGFNAEVRSKDPGKKIGEA-- 286
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L +VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL
Sbjct: 287 ---LRAVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALIQILTEPKNAL 333
>gi|329296783|ref|ZP_08254119.1| ATP-dependent protease ATP-binding subunit ClpX [Plautia stali
symbiont]
Length = 423
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQEKAKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEKAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS+R + S IGFGA V+ G + A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRVETGSGIGFGATVK-----GKSQKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILREPKNAL 333
>gi|411119404|ref|ZP_11391784.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Oscillatoriales cyanobacterium JSC-12]
gi|410711267|gb|EKQ68774.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Oscillatoriales cyanobacterium JSC-12]
Length = 447
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/303 (55%), Positives = 221/303 (72%), Gaps = 18/303 (5%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+R +L + +P P+EI K LD VIGQ+ AKK+LSVAVYNHYKR+ S E
Sbjct: 70 TRTANISLNQ-IPKPREIKKYLDDHVIGQDDAKKILSVAVYNHYKRL--------SFLEA 120
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
K V DD VEL+KSN+LL+GPTG GKTLLA+TLA ++VPF +ADATTLT+AGYVGE
Sbjct: 121 KGTGKVAPDDVVELQKSNILLIGPTGCGKTLLAQTLAEILDVPFAVADATTLTEAGYVGE 180
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+IL +LL A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLE
Sbjct: 181 DVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLE 240
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ NVP +G RKHP D IQ+DT +ILFICGGAFV L+K I +R SIGF
Sbjct: 241 GTVANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLDKAIEQRIGKKSIGF------- 293
Query: 490 MRAG--VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPK 547
++AG + T+ +L+ +E DL+ +G+IPEF+GR P++ + L ED L ++LTEP+
Sbjct: 294 IQAGDNQSKEKRTADILKHLEPDDLVKFGMIPEFIGRVPVMAVVDPLDEDALTEILTEPR 353
Query: 548 NAL 550
NAL
Sbjct: 354 NAL 356
>gi|357031708|ref|ZP_09093651.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconobacter
morbifer G707]
gi|356414938|gb|EHH68582.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconobacter
morbifer G707]
Length = 422
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 160/290 (55%), Positives = 222/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ +AK+ LSVAV+NHYKR+ HA ++
Sbjct: 63 VPTPKEICKVLDDYVIGQFEAKRALSVAVHNHYKRLSHAG----------------KSND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IEIAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NV+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVDRAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ++LFICGGAF L+K I R + S IGFGA VR++ +
Sbjct: 227 RKHPQQEFLQVDTTNMLFICGGAFSGLDKIIVARGKGSGIGFGADVRSD------EERRL 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++L+SVE DL+ +GLIPEF+GR P++ +L L E L+++L++PKNAL
Sbjct: 281 GAILQSVEPEDLLKFGLIPEFIGRLPVIAALNDLDEAALIQILSKPKNAL 330
>gi|303248989|ref|ZP_07335235.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Desulfovibrio
fructosovorans JJ]
gi|302489638|gb|EFL49576.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Desulfovibrio
fructosovorans JJ]
Length = 417
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 222/293 (75%), Gaps = 21/293 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ LP P EI + LD++VIGQE+AKK+L+VAV+NHYKR+Y+A
Sbjct: 59 GKLLP-PAEIKRLLDEYVIGQEQAKKILAVAVHNHYKRVYYAGAAAA------------- 104
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VE++KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL +
Sbjct: 105 -DDVEIDKSNILLIGPTGSGKTLLAQTLARVLNVPFAIADATTLTEAGYVGEDVENILVQ 163
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL A++++EAA +G++YIDE+DKI +K +S +I+RDVSGEGVQQALLK++EGT N+P
Sbjct: 164 LLQNADYDIEAASRGIIYIDEIDKIARKGDSPSITRDVSGEGVQQALLKIIEGTEANIPP 223
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
KG RKHP+ + I+++T +ILFI GGAF+ LEK + +R + +++GFGA V A +
Sbjct: 224 KGGRKHPQQEFIRLNTANILFIVGGAFIGLEKIVGQRMRGTAMGFGAKVEARHDDDM--- 280
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L +DLI +GLIPEF+GR PIL SL LT+D LV++LTEPKNAL
Sbjct: 281 ---SRMLSQAHPADLIKFGLIPEFIGRIPILTSLEELTKDDLVRILTEPKNAL 330
>gi|414075397|ref|YP_006994715.1| ATP-dependent ClpX protease [Anabaena sp. 90]
gi|413968813|gb|AFW92902.1| ATP-dependent ClpX protease [Anabaena sp. 90]
Length = 447
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 167/301 (55%), Positives = 223/301 (74%), Gaps = 14/301 (4%)
Query: 251 RWGGSNLG-EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
R SNL +P P+EI LD+ VIGQ++AKKVLSVAVYNHYKR+ + +
Sbjct: 69 RTRSSNLSFNQIPKPREIKNYLDEHVIGQDEAKKVLSVAVYNHYKRL--------AILQA 120
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
K +A V+ DD +EL+KSN+LL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGE
Sbjct: 121 KGSAKVEADDAIELQKSNILLIGPTGCGKTLLAQTLAKILDVPFAVADATTLTEAGYVGE 180
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+IL +LL A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLE
Sbjct: 181 DVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLE 240
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ NVP +G RKHP D IQ+DT +ILF+CGGAFV LEK + +R SIGF P +
Sbjct: 241 GTVANVPPQGGRKHPYQDCIQIDTSNILFVCGGAFVGLEKVVDQRVGKKSIGFVQP--GD 298
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
++ AA T L ++ DL+ +G+IPEF+GR P++ + L ED L+ +LTEP++A
Sbjct: 299 VQTKEKRAADT---LRHLQPDDLVKFGMIPEFIGRIPMVAVVDPLDEDALMAILTEPRSA 355
Query: 550 L 550
L
Sbjct: 356 L 356
>gi|372268543|ref|ZP_09504591.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas sp.
S89]
Length = 427
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/293 (57%), Positives = 220/293 (75%), Gaps = 24/293 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+EI + LD++VIGQ +AKKVL+VAVYNHYKR L+ G G + K D+
Sbjct: 64 LPTPQEITEILDQYVIGQARAKKVLAVAVYNHYKR-----LRTGKGVKGK--------DD 110
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 VELGKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 170
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 KCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 230
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR---ANMRAGVTDA 497
RKHP+ + +Q+DT +ILFICGGAF L+K I +R + IGF A V+ +N G
Sbjct: 231 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRDRSEKGGIGFSAEVKSKDSNSNFG---- 286
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L +E DL+ YGLIPEFVGR P+ +L L LV++LTEP+NAL
Sbjct: 287 ----EVLLDLEPEDLVRYGLIPEFVGRLPVTATLEELNRAALVQILTEPRNAL 335
>gi|357418075|ref|YP_004931095.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoxanthomonas
spadix BD-a59]
gi|355335653|gb|AER57054.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoxanthomonas
spadix BD-a59]
Length = 428
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 162/291 (55%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ++AK+ L+VAVYNHYKRI D+
Sbjct: 66 LPKPREILEVLDQYVIGQQRAKRTLAVAVYNHYKRIESRQ----------------KSDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVDKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT++ILFICGGAF L+K I R + S IGFGA V+++ +
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFAGLDKIIQARSTEQSGIGFGAKVKSSAK-----KPE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPEFVGR P++ +L L E L+++LTEP+NA+
Sbjct: 285 IGKVLSEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIRILTEPRNAI 335
>gi|118590046|ref|ZP_01547450.1| ATP-dependent protease ATP-binding subunit [Stappia aggregata IAM
12614]
gi|118437543|gb|EAV44180.1| ATP-dependent protease ATP-binding subunit [Stappia aggregata IAM
12614]
Length = 421
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 218/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ AKKVLSVAV+NHYKR+ HA+ +++
Sbjct: 63 IPTPQEIRDVLDDYVIGQGSAKKVLSVAVHNHYKRLNHAS----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS+R +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISDRGTQTSIGFQAKVHAPEDRRIG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L +E DL+ +GLIPEFVGR P++ +L L E+ LV +LTEPKNAL
Sbjct: 282 ---ELFAELEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALVTILTEPKNAL 330
>gi|333892290|ref|YP_004466165.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas sp.
SN2]
gi|332992308|gb|AEF02363.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas sp.
SN2]
Length = 425
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 217/291 (74%), Gaps = 21/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD +VIGQE AKKVLSVAVYNHYKR L+ G D D
Sbjct: 65 LPKPSEIHAHLDDYVIGQEHAKKVLSVAVYNHYKR-----LRNG-----------DVHDG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R Q + IGFGA V++ + A
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAQKGTGIGFGAAVKSKSE----NTAQ 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L + VE DL+ YGLIPEF+GR P++ SL L E+ L+++L EPKNA+
Sbjct: 285 ISELFKQVEPQDLVKYGLIPEFIGRLPVVTSLEELNEEALIQILKEPKNAI 335
>gi|59801072|ref|YP_207784.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
gonorrhoeae FA 1090]
gi|293398934|ref|ZP_06643099.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
gonorrhoeae F62]
gi|75356149|sp|Q5F8W5.1|CLPX_NEIG1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|59717967|gb|AAW89372.1| putative ATP-dependent Clp protease ATP-binding subunit [Neisseria
gonorrhoeae FA 1090]
gi|291610348|gb|EFF39458.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
gonorrhoeae F62]
Length = 414
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/317 (54%), Positives = 220/317 (69%), Gaps = 28/317 (8%)
Query: 235 NGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYK 294
G GG+ GG G LPTP EI LD +VIGQ +AKK L+VAVYNHYK
Sbjct: 43 EGDNGGTPPENAGGEPEESGK-----LPTPAEIVANLDDYVIGQGQAKKALAVAVYNHYK 97
Query: 295 RIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFV 354
R+ H PK D VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV
Sbjct: 98 RLRH----------PKA------DGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFV 141
Query: 355 IADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRD 414
+ADATTLT+AGYVGEDVE I+ KLL + +F+VE A+ G+VYIDE+DKI++K+++ +I+RD
Sbjct: 142 MADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKARHGIVYIDEIDKISRKSDNPSITRD 201
Query: 415 VSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER 474
VSGEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R
Sbjct: 202 VSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTANILFICGGAFAGLEKVIRQR 261
Query: 475 RQDSSIGFGAPVRA-NMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTA 533
+ IGFGA V + + AG+T L VE DLI +GLIPE +GR P++ +L
Sbjct: 262 TEKGGIGFGASVHSKDENAGIT------KLFGIVEPEDLIKFGLIPELIGRLPVIATLEE 315
Query: 534 LTEDQLVKVLTEPKNAL 550
L ED L+ +LTEPKNAL
Sbjct: 316 LDEDALINILTEPKNAL 332
>gi|424863301|ref|ZP_18287214.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [SAR86 cluster
bacterium SAR86A]
gi|400757922|gb|EJP72133.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [SAR86 cluster
bacterium SAR86A]
Length = 418
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 166/292 (56%), Positives = 217/292 (74%), Gaps = 21/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E+L +P EI LD++VIGQEKAKKVLSVAVYNHYKR+ + LK
Sbjct: 58 EELLSPLEIYNQLDEYVIGQEKAKKVLSVAVYNHYKRLKRSGLK---------------- 101
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL+KSNVLL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 102 DDVELQKSNVLLLGPTGSGKTLLAQTLAKILNVPFTIADATTLTEAGYVGEDVENIIQKL 161
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L +A+++ E A+ G+VYIDE+DKI +K+++ +I+RDVSGEGVQQALLK++EGTI ++P +
Sbjct: 162 LQKADYDPEKAELGIVYIDEIDKIARKSDNPSITRDVSGEGVQQALLKLIEGTIASIPPQ 221
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + IQ+DT +ILFICGGAF L K I +R + IGF A V + + +
Sbjct: 222 GGRKHPQQEFIQIDTSNILFICGGAFSGLNKVIEQRTNKTGIGFSAEVDSKSKITSLNKN 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + +E DL+ YGLIPEFVGR P++ +L L ED LV++L EPKNAL
Sbjct: 282 I-----DDLEPEDLVKYGLIPEFVGRLPVISNLHELDEDALVRILKEPKNAL 328
>gi|398798175|ref|ZP_10557476.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pantoea sp.
GM01]
gi|398100892|gb|EJL91120.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pantoea sp.
GM01]
Length = 423
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS+R + S IGFGA V+ G + A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRVETGSGIGFGATVK-----GKSQKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L+ L+E+ L+++L EPKNAL
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILREPKNAL 333
>gi|283784264|ref|YP_003364129.1| ATP-dependent Clp protease ATP-binding subunit [Citrobacter
rodentium ICC168]
gi|282947718|emb|CBG87273.1| ATP-dependent Clp protease ATP-binding subunit [Citrobacter
rodentium ICC168]
Length = 424
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|251791977|ref|YP_003006697.1| ATP-dependent protease ATP-binding subunit ClpX [Aggregatibacter
aphrophilus NJ8700]
gi|422336870|ref|ZP_16417842.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Aggregatibacter aphrophilus F0387]
gi|247533364|gb|ACS96610.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Aggregatibacter aphrophilus NJ8700]
gi|353345880|gb|EHB90169.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Aggregatibacter aphrophilus F0387]
Length = 415
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/293 (54%), Positives = 220/293 (75%), Gaps = 22/293 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LPTP +I LD +VIGQ+ AKKVL+VAVYNHYKR+ +
Sbjct: 61 QELPTPHKIRAHLDDYVIGQDYAKKVLAVAVYNHYKRLRTKH----------------QT 104
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL KSN+LL+GPTGSGKTLLA+T+AR +NVPF +ADATTLT+AGYVGEDVE++L KL
Sbjct: 105 DDVELGKSNILLIGPTGSGKTLLAETMARMLNVPFAMADATTLTEAGYVGEDVENVLQKL 164
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L ++++E A+QG++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGTI ++P +
Sbjct: 165 LQNCDYDIERAEQGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKLIEGTIASIPPQ 224
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +++DT ILFICGGAF L+K I +R ++IGFGA +++ D
Sbjct: 225 GGRKHPQQEMLRIDTSKILFICGGAFAGLDKVIEKRTSVATAIGFGAEIKSE-----KDK 279
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A ++L + VE DL+ YGLIPEF+GR P++ L+ L E+ LV++LTEPKNAL
Sbjct: 280 ATLTNLFKQVEPDDLMKYGLIPEFIGRLPVVAPLSELDEEALVRILTEPKNAL 332
>gi|161619060|ref|YP_001592947.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella canis
ATCC 23365]
gi|376276280|ref|YP_005116719.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella canis
HSK A52141]
gi|189082485|sp|A9M5C1.1|CLPX_BRUC2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|161335871|gb|ABX62176.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
canis ATCC 23365]
gi|363404847|gb|AEW15142.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
canis HSK A52141]
Length = 424
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/292 (55%), Positives = 219/292 (75%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF++ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFIMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFASLDRIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL
Sbjct: 281 RIGEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNAL 332
>gi|452820736|gb|EME27775.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Galdieria
sulphuraria]
Length = 533
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/248 (64%), Positives = 199/248 (80%), Gaps = 5/248 (2%)
Query: 303 KGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLT 362
K G+ + + VELEKSN+L++GPTGSGKTLLAKTLAR VNVPFVI DATTLT
Sbjct: 192 KAGGSRISISPEAVTEHEVELEKSNILIIGPTGSGKTLLAKTLARQVNVPFVIVDATTLT 251
Query: 363 QAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQ 422
QAGYVGEDVESILYKLL A FN+ AQ+G+VYIDE+DK +KK+E+++I+RDVSGEGVQQ
Sbjct: 252 QAGYVGEDVESILYKLLQAAHFNIPLAQKGIVYIDEIDKCSKKSENVSITRDVSGEGVQQ 311
Query: 423 ALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGF 482
ALLKMLEGT+VNVPEKG RK+PRG+ IQ+DTK+ILF+CGGAF LEK +++R +SIGF
Sbjct: 312 ALLKMLEGTVVNVPEKGGRKNPRGEFIQIDTKNILFMCGGAFAGLEKIVADRLAAASIGF 371
Query: 483 GAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKV 542
GA VR ++ + +S+L+ VES+D I YGLIPEFVGR PI + + +LT DQLV +
Sbjct: 372 GAMVRQQ-----SNRDLDASILDYVESTDFIKYGLIPEFVGRLPITLGVHSLTMDQLVSI 426
Query: 543 LTEPKNAL 550
LT+PKNAL
Sbjct: 427 LTQPKNAL 434
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 36/41 (87%)
Query: 256 NLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
N ++ PTPK+I +GL+ +VIGQEKAKKVLSVAVYNHYKR+
Sbjct: 61 NTIQNFPTPKKIYEGLNDYVIGQEKAKKVLSVAVYNHYKRV 101
>gi|334344658|ref|YP_004553210.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sphingobium
chlorophenolicum L-1]
gi|334101280|gb|AEG48704.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sphingobium
chlorophenolicum L-1]
Length = 422
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 219/306 (71%), Gaps = 28/306 (9%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
GG G + GG +PTP+EIC LD +VIGQ +AK+VLSVAV+NHYKR+ H
Sbjct: 54 GGLVGKKDGG------VPTPQEICDVLDDYVIGQNRAKRVLSVAVHNHYKRLNH------ 101
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
G +P VEL KSN+LL+GPTG GKTLLA+TLA+ +VPF +ADATTLT+A
Sbjct: 102 -GTKP---------GEVELAKSNILLVGPTGCGKTLLAQTLAKTFDVPFTMADATTLTEA 151
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL +++NVE AQ+G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQAL
Sbjct: 152 GYVGEDVENIILKLLQASDYNVEKAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQAL 211
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I +R + SIGFGA
Sbjct: 212 LKLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIGDRLEAKSIGFGA 271
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V A + T LL E DL+ +GLIPEFVGR P++ +L L LVK+L
Sbjct: 272 HVAA------PEERKTGELLRQSEPEDLLKFGLIPEFVGRLPVIATLEDLDVTALVKILV 325
Query: 545 EPKNAL 550
EPKNAL
Sbjct: 326 EPKNAL 331
>gi|427405939|ref|ZP_18896144.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Selenomonas
sp. F0473]
gi|425708780|gb|EKU71819.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Selenomonas
sp. F0473]
Length = 421
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/292 (56%), Positives = 222/292 (76%), Gaps = 21/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+D+P PKEI + LD++VIGQ++AKK LSVAVYNHYKRI N+ +G G
Sbjct: 59 KDVPKPKEIRRILDQYVIGQDEAKKSLSVAVYNHYKRI---NMGQGKG------------ 103
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++VEL KSN+L++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct: 104 EDVELRKSNILMIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
+ A++++E AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT +VP +
Sbjct: 164 IQAADYDIEKAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQ 223
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF +E+ I R +GFGA VR+ R V ++
Sbjct: 224 GGRKHPQQELLQIDTTNILFICGGAFDGIEEIIESRLGKKQMGFGAEVRSKKRVSVGES- 282
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L V DL+ GLIPEF+GR P++V+L++L E +V++LTEPKNAL
Sbjct: 283 -----LSKVIPEDLMKNGLIPEFIGRLPVVVTLSSLDEAAMVRILTEPKNAL 329
>gi|390949051|ref|YP_006412810.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Thiocystis
violascens DSM 198]
gi|390425620|gb|AFL72685.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Thiocystis
violascens DSM 198]
Length = 424
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/299 (56%), Positives = 219/299 (73%), Gaps = 24/299 (8%)
Query: 255 SNLGE---DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKT 311
N+GE LP P EI LD+FVIGQEKAKKVLSVAVYNHYKR+ A K
Sbjct: 56 ENVGETTSHLPKPHEIKARLDEFVIGQEKAKKVLSVAVYNHYKRLEVAEAK--------- 106
Query: 312 AAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDV 371
+++E+ KSN++L+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDV
Sbjct: 107 -------EDIEIAKSNIMLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDV 159
Query: 372 ESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
E+I+ KLL + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 160 ENIIQKLLQKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT 219
Query: 432 IVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR 491
+ +VP +G RKHP+ + +Q+DT +ILFI GGAF L+K I R + + IGF A V +
Sbjct: 220 VASVPPQGGRKHPQQEFLQVDTSNILFIVGGAFAGLDKVIQNRSRKTGIGFSAEVHSK-- 277
Query: 492 AGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
D+ LL +VE DLI YGLIPEFVGR P++ +L L E L+++LTEPK+AL
Sbjct: 278 ---DDSRQIGELLSAVEPEDLIRYGLIPEFVGRLPVMATLEELDEPALMRILTEPKHAL 333
>gi|33592843|ref|NP_880487.1| ATP-dependent protease ATP-binding protein ClpX [Bordetella
pertussis Tohama I]
gi|384204142|ref|YP_005589881.1| ATP-dependent protease ATP-binding subunit ClpX [Bordetella
pertussis CS]
gi|408415563|ref|YP_006626270.1| ATP-dependent Clp protease ATP-binding subunit [Bordetella
pertussis 18323]
gi|46576479|sp|Q7VXI6.1|CLPX_BORPE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|33572491|emb|CAE42063.1| ATP-dependent Clp protease ATP-binding subunit [Bordetella
pertussis Tohama I]
gi|332382256|gb|AEE67103.1| ATP-dependent protease ATP-binding subunit ClpX [Bordetella
pertussis CS]
gi|401777733|emb|CCJ63064.1| ATP-dependent Clp protease ATP-binding subunit [Bordetella
pertussis 18323]
Length = 434
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 211/291 (72%), Gaps = 21/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI LD++VIGQ K++L+VAVYNHYKRI H +K D
Sbjct: 63 ELPTPAEIKTFLDQYVIGQTSPKRMLAVAVYNHYKRIRHGEIK---------------GD 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN++L+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 EVELSKSNIMLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+ ++YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYDVEKAQRAIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFI GGAF LEK I +R + S IGF A VRA GV +
Sbjct: 228 GRKHPNQDFVQVDTTNILFIVGGAFDGLEKVIRDRTEKSGIGFSAAVRAKSERGVGE--- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L E DLI +GLIPE VGR P++ +L L E LV++LTEPKNAL
Sbjct: 285 ---LFSEAEPEDLIKFGLIPELVGRLPVVATLDELDEAVLVQILTEPKNAL 332
>gi|169634425|ref|YP_001708161.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii SDF]
gi|169797266|ref|YP_001715059.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AYE]
gi|184156808|ref|YP_001845147.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ACICU]
gi|213155940|ref|YP_002317985.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB0057]
gi|215484707|ref|YP_002326942.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii AB307-0294]
gi|239500789|ref|ZP_04660099.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB900]
gi|260556148|ref|ZP_05828367.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|301346761|ref|ZP_07227502.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB056]
gi|301512253|ref|ZP_07237490.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB058]
gi|301594242|ref|ZP_07239250.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB059]
gi|332851227|ref|ZP_08433300.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6013150]
gi|332866081|ref|ZP_08436809.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6013113]
gi|332873221|ref|ZP_08441178.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6014059]
gi|384130480|ref|YP_005513092.1| clpX [Acinetobacter baumannii 1656-2]
gi|384141765|ref|YP_005524475.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii MDR-ZJ06]
gi|385236077|ref|YP_005797416.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii TCDC-AB0715]
gi|387125277|ref|YP_006291159.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Acinetobacter baumannii MDR-TJ]
gi|403673395|ref|ZP_10935692.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
NCTC 10304]
gi|407931413|ref|YP_006847056.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Acinetobacter baumannii TYTH-1]
gi|416146585|ref|ZP_11601248.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB210]
gi|417548860|ref|ZP_12199941.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-18]
gi|417554476|ref|ZP_12205545.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-81]
gi|417559835|ref|ZP_12210714.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC137]
gi|417566510|ref|ZP_12217382.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC143]
gi|417570410|ref|ZP_12221267.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC189]
gi|417571823|ref|ZP_12222677.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Canada BC-5]
gi|417577372|ref|ZP_12228217.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-17]
gi|417871121|ref|ZP_12516064.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH1]
gi|417875783|ref|ZP_12520587.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH2]
gi|417879719|ref|ZP_12524275.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH3]
gi|417882117|ref|ZP_12526425.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH4]
gi|421201042|ref|ZP_15658201.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC109]
gi|421202631|ref|ZP_15659779.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AC12]
gi|421454197|ref|ZP_15903546.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-123]
gi|421533665|ref|ZP_15979946.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AC30]
gi|421625769|ref|ZP_16066615.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC098]
gi|421630631|ref|ZP_16071332.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC180]
gi|421634255|ref|ZP_16074874.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-13]
gi|421642783|ref|ZP_16083294.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-235]
gi|421649346|ref|ZP_16089741.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-251]
gi|421650920|ref|ZP_16091292.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC0162]
gi|421655156|ref|ZP_16095480.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-72]
gi|421659274|ref|ZP_16099495.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-83]
gi|421675826|ref|ZP_16115745.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC065]
gi|421677460|ref|ZP_16117352.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC111]
gi|421688455|ref|ZP_16128155.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-143]
gi|421692612|ref|ZP_16132263.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-116]
gi|421698050|ref|ZP_16137594.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-58]
gi|421702212|ref|ZP_16141697.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ZWS1122]
gi|421705951|ref|ZP_16145372.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ZWS1219]
gi|421789232|ref|ZP_16225494.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-82]
gi|421792386|ref|ZP_16228541.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-2]
gi|421798248|ref|ZP_16234273.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-21]
gi|421798785|ref|ZP_16234796.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Canada BC1]
gi|421805852|ref|ZP_16241728.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-A-694]
gi|421807882|ref|ZP_16243739.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC035]
gi|424053764|ref|ZP_17791295.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab11111]
gi|424061208|ref|ZP_17798698.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab33333]
gi|424064699|ref|ZP_17802183.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab44444]
gi|425749276|ref|ZP_18867256.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-348]
gi|425751578|ref|ZP_18869523.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-113]
gi|445400104|ref|ZP_21429754.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-57]
gi|445446824|ref|ZP_21443455.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-A-92]
gi|445465207|ref|ZP_21449985.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC338]
gi|445481642|ref|ZP_21456086.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-78]
gi|445486129|ref|ZP_21457187.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii AA-014]
gi|226706570|sp|B7H092.1|CLPX_ACIB3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706571|sp|B7I5E4.1|CLPX_ACIB5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238685491|sp|A3M1Y8.2|CLPX_ACIBT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238688025|sp|B0V4T7.1|CLPX_ACIBY RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238688111|sp|B0VKU4.1|CLPX_ACIBS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238691033|sp|B2I3C2.1|CLPX_ACIBC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|169150193|emb|CAM88087.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter
baumannii AYE]
gi|169153217|emb|CAP02313.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter
baumannii]
gi|183208402|gb|ACC55800.1| ATP-dependent protease Clp, ATPase subunit [Acinetobacter baumannii
ACICU]
gi|193076290|gb|ABO10932.2| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter
baumannii ATCC 17978]
gi|213055100|gb|ACJ40002.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii AB0057]
gi|213988694|gb|ACJ58993.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii AB307-0294]
gi|260410203|gb|EEX03502.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|322506700|gb|ADX02154.1| clpX [Acinetobacter baumannii 1656-2]
gi|323516574|gb|ADX90955.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii TCDC-AB0715]
gi|332730107|gb|EGJ61434.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6013150]
gi|332734827|gb|EGJ65920.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6013113]
gi|332738733|gb|EGJ69603.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6014059]
gi|333365966|gb|EGK47980.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB210]
gi|342224855|gb|EGT89870.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH2]
gi|342225942|gb|EGT90918.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH1]
gi|342227605|gb|EGT92524.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH3]
gi|342238366|gb|EGU02799.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH4]
gi|347592258|gb|AEP04979.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii MDR-ZJ06]
gi|385879769|gb|AFI96864.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Acinetobacter baumannii MDR-TJ]
gi|395522417|gb|EJG10506.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC137]
gi|395550858|gb|EJG16867.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC189]
gi|395552182|gb|EJG18190.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC143]
gi|395563074|gb|EJG24727.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC109]
gi|395570593|gb|EJG31255.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-17]
gi|398328014|gb|EJN44144.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AC12]
gi|400207391|gb|EJO38361.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Canada BC-5]
gi|400212964|gb|EJO43921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-123]
gi|400389159|gb|EJP52231.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-18]
gi|400390893|gb|EJP57940.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-81]
gi|404559898|gb|EKA65149.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-116]
gi|404561198|gb|EKA66434.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-143]
gi|404573096|gb|EKA78136.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-58]
gi|404666890|gb|EKB34820.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab33333]
gi|404667250|gb|EKB35171.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab11111]
gi|404672782|gb|EKB40586.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab44444]
gi|407194975|gb|EKE66111.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ZWS1122]
gi|407195364|gb|EKE66498.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ZWS1219]
gi|407899994|gb|AFU36825.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Acinetobacter baumannii TYTH-1]
gi|408508932|gb|EKK10608.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC0162]
gi|408509293|gb|EKK10968.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-72]
gi|408511349|gb|EKK12997.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-235]
gi|408514119|gb|EKK15731.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-251]
gi|408697017|gb|EKL42537.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC180]
gi|408697863|gb|EKL43369.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC098]
gi|408704973|gb|EKL50329.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-13]
gi|408707985|gb|EKL53263.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-83]
gi|409988337|gb|EKO44509.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AC30]
gi|410381343|gb|EKP33909.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC065]
gi|410393216|gb|EKP45570.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC111]
gi|410394834|gb|EKP47158.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-21]
gi|410399162|gb|EKP51359.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-82]
gi|410400693|gb|EKP52861.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-2]
gi|410408114|gb|EKP60089.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-A-694]
gi|410411434|gb|EKP63305.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Canada BC1]
gi|410416061|gb|EKP67836.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC035]
gi|425489349|gb|EKU55661.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-348]
gi|425500025|gb|EKU66053.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-113]
gi|444759766|gb|ELW84228.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-A-92]
gi|444769614|gb|ELW93782.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii AA-014]
gi|444770434|gb|ELW94591.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-78]
gi|444779339|gb|ELX03333.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC338]
gi|444783486|gb|ELX07345.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-57]
gi|452955760|gb|EME61157.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii MSP4-16]
Length = 437
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 219/291 (75%), Gaps = 20/291 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG-SGAEPKTAAAVDNDD 319
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G SG K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKR-----LKVGQSGHVSK--------- 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 166 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ +
Sbjct: 226 GRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNK-----DETKK 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE +DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 281 LAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNAL 331
>gi|398792057|ref|ZP_10552755.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pantoea sp.
YR343]
gi|398214189|gb|EJN00772.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pantoea sp.
YR343]
Length = 423
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS+R + S IGFGA V+ G + A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRVETGSGIGFGATVK-----GKSQKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L+ L+E+ L+++L EPKNAL
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILREPKNAL 333
>gi|416893126|ref|ZP_11924412.1| ATP-dependent protease ATP-binding subunit [Aggregatibacter
aphrophilus ATCC 33389]
gi|347814154|gb|EGY30804.1| ATP-dependent protease ATP-binding subunit [Aggregatibacter
aphrophilus ATCC 33389]
Length = 415
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/293 (54%), Positives = 219/293 (74%), Gaps = 22/293 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LPTP +I LD +VIGQ+ AKKVL+VAVYNHYKR+ +
Sbjct: 61 QELPTPHKIRAHLDDYVIGQDYAKKVLAVAVYNHYKRLRTKH----------------QT 104
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL KSN+LL+GPTGSGKTLLA+T+AR +NVPF +ADATTLT+AGYVGEDVE++L KL
Sbjct: 105 DDVELGKSNILLIGPTGSGKTLLAETMARMLNVPFAMADATTLTEAGYVGEDVENVLQKL 164
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L ++++E A+QG++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGTI ++P +
Sbjct: 165 LQNCDYDIERAEQGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKLIEGTIASIPPQ 224
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +++DT ILFICGGAF L+K I +R ++IGFGA +++ D
Sbjct: 225 GGRKHPQQEMLRIDTSKILFICGGAFAGLDKVIEKRTSVATAIGFGAEIKSE-----KDK 279
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A + L + VE DL+ YGLIPEF+GR P++ L+ L E+ LV++LTEPKNAL
Sbjct: 280 ATLTDLFKQVEPDDLMKYGLIPEFIGRLPVVAPLSELDEEALVRILTEPKNAL 332
>gi|16759429|ref|NP_455046.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|29142799|ref|NP_806141.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|213160793|ref|ZP_03346503.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E00-7866]
gi|213425857|ref|ZP_03358607.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E02-1180]
gi|213646004|ref|ZP_03376057.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Typhi str. J185]
gi|289827299|ref|ZP_06545982.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|378960581|ref|YP_005218067.1| ATP-dependent Clp protease ATP-binding subunit clpX [Salmonella
enterica subsp. enterica serovar Typhi str. P-stx-12]
gi|21263470|sp|Q8Z8V1.1|CLPX_SALTI RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|25296072|pir||AD0558 ATP-dependent clp protease ATP-binding chain ClpX [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16501720|emb|CAD08908.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhi]
gi|29138431|gb|AAO70001.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|374354453|gb|AEZ46214.1| ATP-dependent Clp protease ATP-binding subunit clpX [Salmonella
enterica subsp. enterica serovar Typhi str. P-stx-12]
Length = 423
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 217/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRTHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLTGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ LV++L EPKNAL
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALVQILKEPKNAL 333
>gi|333900436|ref|YP_004474309.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
fulva 12-X]
gi|333115701|gb|AEF22215.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
fulva 12-X]
Length = 426
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 215/290 (74%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ K D+
Sbjct: 65 LPAPREISAILDQYVIGQERAKKILAVAVYNHYKRLNQREKK----------------DD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLLGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF +EK I R IGF A VR + +
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFAGIEKVIQGRSTKGGIGFNAEVRTKD----VEKKIG 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E +E DL+ +GLIPEFVGR P++ +L L E LV++LTEPKNAL
Sbjct: 285 ESLRE-IEPDDLVKFGLIPEFVGRLPVIATLEELDEAALVQILTEPKNAL 333
>gi|429737529|ref|ZP_19271387.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sp. oral taxon 138 str. F0429]
gi|429152335|gb|EKX95165.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sp. oral taxon 138 str. F0429]
Length = 421
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 166/292 (56%), Positives = 220/292 (75%), Gaps = 21/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+D+P PKEI LD++VIGQ++AKK LSVAVYNHYKRI N+ +G
Sbjct: 59 KDVPKPKEIRHILDQYVIGQDEAKKSLSVAVYNHYKRI---NVGQGKS------------ 103
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++VEL KSN+L++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct: 104 EDVELRKSNILMLGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
+ A++++E AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT +VP +
Sbjct: 164 IQAADYDIEKAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQ 223
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF +E+ I R +GFGA VR+ R V ++
Sbjct: 224 GGRKHPQQELLQIDTTNILFICGGAFDGIEEIIESRLGKKQMGFGAEVRSKKRISVGES- 282
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L V DL+ GLIPEF+GR P++V+L +L ED LV++LTEPKNAL
Sbjct: 283 -----LSKVIPEDLMKNGLIPEFIGRLPVVVTLNSLDEDALVRILTEPKNAL 329
>gi|158336586|ref|YP_001517760.1| ATP-dependent protease ATP-binding subunit ClpX [Acaryochloris
marina MBIC11017]
gi|189082482|sp|B0C146.1|CLPX_ACAM1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|158306827|gb|ABW28444.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acaryochloris
marina MBIC11017]
Length = 447
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 162/292 (55%), Positives = 217/292 (74%), Gaps = 17/292 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P++I LD+ VIGQ++AKKVLSVAVYNHYKR+ + S AE DD
Sbjct: 78 IPKPRDIKSYLDEHVIGQDEAKKVLSVAVYNHYKRLSISQASADSVAEL--------DDA 129
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL+KSN+LL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +LL
Sbjct: 130 IELQKSNILLIGPTGCGKTLLAQTLAQMLDVPFAVADATTLTEAGYVGEDVENILLRLLQ 189
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+ +VE AQ+G++YIDE+DK+ +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +G
Sbjct: 190 VADLDVEEAQRGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQGG 249
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGF--GAPVRANMRAGVTDAA 498
RKHP D IQ+DT +ILFICGGAFV L+K I +R ++GF +RA +
Sbjct: 250 RKHPYQDCIQIDTTNILFICGGAFVGLDKIIEQRTGKKAMGFIQDGELRAKEQR------ 303
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T+ +L +E+ DL+ +G+IPEF GR P++ + AL ED L ++LTEP+NAL
Sbjct: 304 -TADMLRDLEAEDLVKFGMIPEFTGRIPVMSVIDALDEDVLCQILTEPRNAL 354
>gi|440288750|ref|YP_007341515.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Enterobacteriaceae bacterium strain FGI 57]
gi|440048272|gb|AGB79330.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Enterobacteriaceae bacterium strain FGI 57]
Length = 424
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V++ TD A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKSK-----TDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLTQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|438047873|ref|ZP_20856089.1| ATP-dependent protease ATP-binding subunit ClpX, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 50-5646]
gi|435319477|gb|ELO92304.1| ATP-dependent protease ATP-binding subunit ClpX, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 50-5646]
Length = 419
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRTHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|157146945|ref|YP_001454264.1| ATP-dependent protease ATP-binding subunit ClpX [Citrobacter koseri
ATCC BAA-895]
gi|166214770|sp|A8AK15.1|CLPX_CITK8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|157084150|gb|ABV13828.1| hypothetical protein CKO_02722 [Citrobacter koseri ATCC BAA-895]
Length = 424
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|384083496|ref|ZP_09994671.1| ATP-dependent protease ATP-binding subunit ClpX [gamma
proteobacterium HIMB30]
Length = 430
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 162/290 (55%), Positives = 218/290 (75%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+ I LD +VIGQ++AK+VL+VAVYNHYKR+ H ++G + +
Sbjct: 67 LPVPQVIKTTLDDYVIGQDRAKRVLAVAVYNHYKRLRHG--ERG-------------ERD 111
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 112 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 171
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 172 KCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 231
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I +R + IGFGA VR+ ++
Sbjct: 232 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRDRSEKGGIGFGAEVRSK-----DESKSV 286
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
VE DL+ YGLIPEFVGR P++ +L L ED L+++L+EPKNAL
Sbjct: 287 GEAFAEVEPEDLVKYGLIPEFVGRLPVVATLGELDEDALIQILSEPKNAL 336
>gi|344199552|ref|YP_004783878.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Acidithiobacillus ferrivorans SS3]
gi|343774996|gb|AEM47552.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Acidithiobacillus ferrivorans SS3]
Length = 423
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 173/299 (57%), Positives = 223/299 (74%), Gaps = 23/299 (7%)
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
G S E LP P EI K LD +VIGQ+ AKKVLSVAVYNHYKR+ +
Sbjct: 55 GHSEGQEKLPKPMEIRKTLDDYVIGQDAAKKVLSVAVYNHYKRLEYGG------------ 102
Query: 313 AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVE 372
D+ VEL+KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE
Sbjct: 103 ----KDNEVELDKSNILLIGPTGSGKTLLAQTLARLLNVPFAMADATTLTEAGYVGEDVE 158
Query: 373 SILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI 432
+I+ KLL + +++VE AQ G+VYIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 159 NIIQKLLQKCDYDVEKAQTGIVYIDEIDKITRKSENPSITRDVSGEGVQQALLKLIEGTV 218
Query: 433 VNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA 492
+VP +G RKHP+ + +Q+DT+ ILFICGGAF LEK++S R + +GF AP++
Sbjct: 219 ASVPPQGGRKHPQQEFLQVDTRHILFICGGAFAGLEKSVSARLEKGGMGFNAPLK----- 273
Query: 493 GVTDAAVTSSLL-ESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ D T++LL +++E DL+ YGLIPEFVGR PIL L L E+ LV +LTEPKNAL
Sbjct: 274 -LRDKGATAALLMQNLEPEDLVRYGLIPEFVGRLPILALLEELDEEALVSILTEPKNAL 331
>gi|153813469|ref|ZP_01966137.1| hypothetical protein RUMOBE_03889 [Ruminococcus obeum ATCC 29174]
gi|149830413|gb|EDM85505.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ruminococcus
obeum ATCC 29174]
Length = 437
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 214/291 (73%), Gaps = 23/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+L P+EI K LD +VIGQ++AKK LSVAVYNHYKRI A N D
Sbjct: 64 NLLKPEEIHKILDDYVIGQDEAKKALSVAVYNHYKRI----------------TASKNLD 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL+KSN+L++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL K++
Sbjct: 108 -VELQKSNILMLGPTGSGKTLLAQTLARLLNVPFAIADATTLTEAGYVGEDVENILLKII 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E AQ G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 167 QAADYDIERAQYGIIYIDEIDKITRKSENASITRDVSGEGVQQALLKILEGTVASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF +EKTI R+ SIGFGA V +
Sbjct: 227 GRKHPHQEFIQIDTTNILFICGGAFDGIEKTIEARQDTKSIGFGADVSVQEERNI----- 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L+ V D I YGLIPEF+GR PI+V+L L E+ L+++L EPKN+L
Sbjct: 282 -GEILKDVMPEDFIKYGLIPEFIGRVPIVVTLDGLDEEALIRILKEPKNSL 331
>gi|359411826|ref|ZP_09204291.1| ATP-dependent Clp protease ATP-binding subunit clpX [Clostridium
sp. DL-VIII]
gi|357170710|gb|EHI98884.1| ATP-dependent Clp protease ATP-binding subunit clpX [Clostridium
sp. DL-VIII]
Length = 429
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 219/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P EI + LD +VIGQE+AKK L+VAVYNHYKRI N K +D +
Sbjct: 60 VPKPNEIKEYLDSYVIGQERAKKSLAVAVYNHYKRI---NTNK-------------DDID 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELSKSNILLLGPTGSGKTLLAQTLARFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 NADYDVEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I R + SS+GFGA ++A V
Sbjct: 224 RKHPHQEFIQINTSNILFICGGAFDGVDKIIENRTRKSSMGFGAEIQAKHEKDV------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL+ + +DL+ +GLIPEFVGR PILV+L +L + L+++LT+PKNAL
Sbjct: 278 GKLLKEIMPADLLKFGLIPEFVGRLPILVTLESLDREALIQILTKPKNAL 327
>gi|254502854|ref|ZP_05115005.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Labrenzia
alexandrii DFL-11]
gi|222438925|gb|EEE45604.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Labrenzia
alexandrii DFL-11]
Length = 421
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 166/292 (56%), Positives = 218/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ AKKVLSVAV+NHYKR+ HA+ +++
Sbjct: 63 IPTPQEIRDVLDDYVIGQGSAKKVLSVAVHNHYKRLNHAS----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT ++LFICGGAF L+K IS+R +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISDRGTQTSIGFQAQVHAPEDRRIG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L +E DL+ +GLIPEFVGR P++ +L L ED L+ +LTEPKNAL
Sbjct: 282 ---ELFSELEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALITILTEPKNAL 330
>gi|445458101|ref|ZP_21446925.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC047]
gi|444775745|gb|ELW99801.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC047]
Length = 437
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 219/291 (75%), Gaps = 20/291 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG-SGAEPKTAAAVDNDD 319
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G SG K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKR-----LKVGQSGHVSK--------- 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 166 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ +
Sbjct: 226 GRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNK-----DETKK 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE +DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 281 LAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNAL 331
>gi|227328850|ref|ZP_03832874.1| ATP-dependent protease ATP-binding subunit ClpX [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 424
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 166/292 (56%), Positives = 220/292 (75%), Gaps = 24/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + LD +VIGQE+AKKVL+VAVYNHYKR+ + D+ +
Sbjct: 64 LPTPHEIRRHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DSSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS--SIGFGAPVRANMRAGVTDAA 498
RKHP+ + +Q+DT ILFICGGAF L+K I E+R D+ IGF A V+ G D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVI-EQRTDTGRGIGFNATVK-----GSADKA 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL +VE DLI +GLIPEF+GR P++ +L L+ED L+++L EPKNAL
Sbjct: 282 TEGELLSNVEPGDLIKFGLIPEFIGRLPVVATLRELSEDALIQILREPKNAL 333
>gi|269102130|ref|ZP_06154827.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268162028|gb|EEZ40524.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 392
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 164/294 (55%), Positives = 219/294 (74%), Gaps = 21/294 (7%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G +LPTP+EI LD +VIGQE AKKVL+VAVYNHYKR+ + + N
Sbjct: 28 GSELPTPQEIRHNLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDT---------------N 72
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 73 SDGVELGKSNILLIGPTGSGKTLLAETLARMLDVPFTMADATTLTEAGYVGEDVENIIQK 132
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++V A++G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 133 LLQKCDYDVAKAERGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 192
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTD 496
+G RKHP+ + +Q+DT ILFICGGAF L+K I +R ++ IGFGA VR+ +
Sbjct: 193 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATNTGIGFGAEVRSK-----DE 247
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + L VE DL+ +GLIPEF+GR P+ +LT L ED LV++L EPKNAL
Sbjct: 248 SRTLTDLFLQVEPEDLVKFGLIPEFIGRLPVTATLTELDEDALVQILREPKNAL 301
>gi|16763830|ref|NP_459445.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|56414395|ref|YP_151470.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|62179061|ref|YP_215478.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|161615357|ref|YP_001589321.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|167990433|ref|ZP_02571533.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|168231438|ref|ZP_02656496.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|168237564|ref|ZP_02662622.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|168261114|ref|ZP_02683087.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|168465543|ref|ZP_02699425.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|168818939|ref|ZP_02830939.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|194445635|ref|YP_002039692.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194451482|ref|YP_002044484.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194471272|ref|ZP_03077256.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|194734820|ref|YP_002113480.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197250772|ref|YP_002145430.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197263118|ref|ZP_03163192.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|197363315|ref|YP_002142952.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|198242558|ref|YP_002214403.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|200390026|ref|ZP_03216637.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205351760|ref|YP_002225561.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|224582287|ref|YP_002636085.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|238911420|ref|ZP_04655257.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
gi|374978475|ref|ZP_09719817.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|375000177|ref|ZP_09724517.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Infantis str. SARB27]
gi|375113376|ref|ZP_09758546.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
gi|375117885|ref|ZP_09763052.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|375122545|ref|ZP_09767709.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. SG9]
gi|378443953|ref|YP_005231585.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|378448787|ref|YP_005236146.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|378698412|ref|YP_005180369.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|378983054|ref|YP_005246209.1| ATP-dependent Clp protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|378987851|ref|YP_005251015.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
gi|379699670|ref|YP_005241398.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
gi|383495257|ref|YP_005395946.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. 798]
gi|386590382|ref|YP_006086782.1| ATP-dependent Clp protease ATP-binding ClpX [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|409248895|ref|YP_006884733.1| ATP-dependent Clp protease ATP-binding subunit clpX [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|416424705|ref|ZP_11691886.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|416432830|ref|ZP_11696435.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|416440100|ref|ZP_11700681.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|416444541|ref|ZP_11703774.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|416453747|ref|ZP_11709821.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|416458587|ref|ZP_11713106.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|416465623|ref|ZP_11716945.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|416473281|ref|ZP_11719748.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|416484369|ref|ZP_11724165.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|416501556|ref|ZP_11732146.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|416510474|ref|ZP_11737072.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|416520601|ref|ZP_11740313.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|416526652|ref|ZP_11742557.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|416536138|ref|ZP_11748205.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|416542340|ref|ZP_11751510.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|416552362|ref|ZP_11757078.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|416557283|ref|ZP_11759412.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|416573529|ref|ZP_11767875.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|416576688|ref|ZP_11769270.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|416583720|ref|ZP_11773476.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|416595068|ref|ZP_11780882.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|416596607|ref|ZP_11781499.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|416605756|ref|ZP_11787188.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|416614719|ref|ZP_11792971.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|416623398|ref|ZP_11797373.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|416634044|ref|ZP_11802325.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|416639006|ref|ZP_11804305.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|416648502|ref|ZP_11809147.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|416653402|ref|ZP_11811846.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|416670922|ref|ZP_11820411.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|416673585|ref|ZP_11820908.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|416691333|ref|ZP_11826155.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|416706819|ref|ZP_11832008.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|416713233|ref|ZP_11836875.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|416719436|ref|ZP_11841292.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|416723572|ref|ZP_11844238.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|416734154|ref|ZP_11850809.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|416740074|ref|ZP_11854162.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|416745271|ref|ZP_11857203.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|416757172|ref|ZP_11863002.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|416764386|ref|ZP_11867990.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|416766795|ref|ZP_11869411.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|417324523|ref|ZP_12110765.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Adelaide str. A4-669]
gi|417339755|ref|ZP_12121241.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
gi|417356091|ref|ZP_12131736.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Give str. S5-487]
gi|417379166|ref|ZP_12147615.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Johannesburg str. S5-703]
gi|417388735|ref|ZP_12152776.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
gi|417406176|ref|ZP_12157836.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Mississippi str. A4-633]
gi|417451306|ref|ZP_12163047.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. S5-403]
gi|417504470|ref|ZP_12174141.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
gi|417516427|ref|ZP_12179333.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Uganda str. R8-3404]
gi|417525810|ref|ZP_12184554.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Urbana str. R8-2977]
gi|417537134|ref|ZP_12190098.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
gi|418485273|ref|ZP_13054257.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|418490799|ref|ZP_13057335.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035278]
gi|418493156|ref|ZP_13059624.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035318]
gi|418498100|ref|ZP_13064515.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035320]
gi|418504394|ref|ZP_13070752.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035321]
gi|418507975|ref|ZP_13074283.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035327]
gi|418511865|ref|ZP_13078113.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Pomona str. ATCC 10729]
gi|418525615|ref|ZP_13091595.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008286]
gi|418763193|ref|ZP_13319317.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|418766727|ref|ZP_13322799.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|418771898|ref|ZP_13327904.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|418774851|ref|ZP_13330812.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|418781196|ref|ZP_13337081.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|418784658|ref|ZP_13340495.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|418791370|ref|ZP_13347133.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|418793870|ref|ZP_13349596.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|418799552|ref|ZP_13355218.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
gi|418804742|ref|ZP_13360346.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|418807602|ref|ZP_13363160.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|418812140|ref|ZP_13367664.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|418815499|ref|ZP_13371000.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21538]
gi|418821320|ref|ZP_13376745.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22425]
gi|418831777|ref|ZP_13386727.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|418835779|ref|ZP_13390670.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|418838763|ref|ZP_13393605.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|418844393|ref|ZP_13399185.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|418848965|ref|ZP_13403700.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|418853325|ref|ZP_13408018.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|418860807|ref|ZP_13415382.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|418864290|ref|ZP_13418825.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|418866313|ref|ZP_13420776.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
gi|419727609|ref|ZP_14254577.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41579]
gi|419733912|ref|ZP_14260807.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41563]
gi|419738878|ref|ZP_14265634.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41573]
gi|419743019|ref|ZP_14269687.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41566]
gi|419749565|ref|ZP_14276044.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41565]
gi|419788920|ref|ZP_14314603.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. Levine 1]
gi|419793962|ref|ZP_14319578.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. Levine 15]
gi|421357761|ref|ZP_15808069.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
622731-39]
gi|421365244|ref|ZP_15815466.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639016-6]
gi|421368980|ref|ZP_15819164.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
640631]
gi|421372428|ref|ZP_15822577.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-0424]
gi|421376039|ref|ZP_15826148.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-6]
gi|421380609|ref|ZP_15830671.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
485549-17]
gi|421383973|ref|ZP_15834002.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-22]
gi|421392474|ref|ZP_15842431.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-70]
gi|421396009|ref|ZP_15845941.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-26]
gi|421398668|ref|ZP_15848573.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-37]
gi|421405150|ref|ZP_15854985.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-46]
gi|421407750|ref|ZP_15857557.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-50]
gi|421412092|ref|ZP_15861855.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-1427]
gi|421419439|ref|ZP_15869131.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-2659]
gi|421423884|ref|ZP_15873535.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
78-1757]
gi|421425638|ref|ZP_15875273.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
22510-1]
gi|421429986|ref|ZP_15879580.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 8b-1]
gi|421436813|ref|ZP_15886339.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648905
5-18]
gi|421439186|ref|ZP_15888677.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
6-18]
gi|421445861|ref|ZP_15895282.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
50-3079]
gi|421451187|ref|ZP_15900553.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
58-6482]
gi|421572545|ref|ZP_16018191.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00322]
gi|421577454|ref|ZP_16023042.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00325]
gi|421582043|ref|ZP_16027584.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00326]
gi|421584558|ref|ZP_16030066.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00328]
gi|421884327|ref|ZP_16315542.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Senftenberg str. SS209]
gi|422024584|ref|ZP_16371061.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm1]
gi|422029607|ref|ZP_16375863.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm2]
gi|427545786|ref|ZP_18926372.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm8]
gi|427562134|ref|ZP_18931137.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm9]
gi|427580637|ref|ZP_18935959.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm3]
gi|427602845|ref|ZP_18940735.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm4]
gi|427627513|ref|ZP_18945645.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm6]
gi|427650794|ref|ZP_18950401.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm10]
gi|427659814|ref|ZP_18955355.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm11]
gi|427664927|ref|ZP_18960101.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm12]
gi|427698522|ref|ZP_18965035.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm5]
gi|436615596|ref|ZP_20514265.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22704]
gi|436810602|ref|ZP_20529640.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1882]
gi|436813650|ref|ZP_20531838.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1884]
gi|436831374|ref|ZP_20536042.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1594]
gi|436849786|ref|ZP_20540923.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1566]
gi|436856199|ref|ZP_20545304.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1580]
gi|436863184|ref|ZP_20549727.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1543]
gi|436871660|ref|ZP_20554834.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1441]
gi|436878811|ref|ZP_20559230.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1810]
gi|436886926|ref|ZP_20563332.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1558]
gi|436894407|ref|ZP_20567885.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1018]
gi|436904533|ref|ZP_20574550.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1010]
gi|436909990|ref|ZP_20576575.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1729]
gi|436918243|ref|ZP_20581414.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0895]
gi|436925536|ref|ZP_20585968.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0899]
gi|436934283|ref|ZP_20590287.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1457]
gi|436941289|ref|ZP_20594849.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1747]
gi|436949279|ref|ZP_20599293.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0968]
gi|436959669|ref|ZP_20603866.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1444]
gi|436975114|ref|ZP_20611390.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1445]
gi|436987195|ref|ZP_20615839.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1559]
gi|436999732|ref|ZP_20620305.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1565]
gi|437010050|ref|ZP_20624030.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1808]
gi|437018153|ref|ZP_20626645.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1811]
gi|437035562|ref|ZP_20633488.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0956]
gi|437046588|ref|ZP_20638404.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1455]
gi|437049339|ref|ZP_20639959.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1575]
gi|437056847|ref|ZP_20644215.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1725]
gi|437065299|ref|ZP_20648984.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1745]
gi|437078921|ref|ZP_20656415.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1791]
gi|437081945|ref|ZP_20658020.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1795]
gi|437089969|ref|ZP_20662541.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
576709]
gi|437117165|ref|ZP_20669785.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
635290-58]
gi|437122540|ref|ZP_20672382.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-16]
gi|437132641|ref|ZP_20678091.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-19]
gi|437137748|ref|ZP_20680543.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-2]
gi|437149061|ref|ZP_20687934.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-9]
gi|437151980|ref|ZP_20689651.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629163]
gi|437160928|ref|ZP_20695001.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE15-1]
gi|437172785|ref|ZP_20701308.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_N202]
gi|437176840|ref|ZP_20703644.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_56-3991]
gi|437188249|ref|ZP_20710253.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_76-3618]
gi|437238183|ref|ZP_20714100.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
13183-1]
gi|437259710|ref|ZP_20717230.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_81-2490]
gi|437272721|ref|ZP_20724471.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL909]
gi|437274739|ref|ZP_20725431.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL913]
gi|437288359|ref|ZP_20730693.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_69-4941]
gi|437307006|ref|ZP_20734648.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
638970-15]
gi|437353360|ref|ZP_20747851.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22558]
gi|437404297|ref|ZP_20752073.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
22-17]
gi|437456276|ref|ZP_20760395.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
40-18]
gi|437470001|ref|ZP_20765016.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
1-1]
gi|437485280|ref|ZP_20769392.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
4-1]
gi|437499043|ref|ZP_20773852.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642046
4-7]
gi|437513522|ref|ZP_20777500.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648898
4-5]
gi|437531376|ref|ZP_20780746.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648899
3-17]
gi|437554752|ref|ZP_20784524.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648900
1-16]
gi|437571698|ref|ZP_20788807.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
1-17]
gi|437595755|ref|ZP_20796008.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
39-2]
gi|437602361|ref|ZP_20798368.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648902
6-8]
gi|437625361|ref|ZP_20805446.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648903
1-6]
gi|437632903|ref|ZP_20806596.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
gi|437658473|ref|ZP_20811680.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 653049
13-19]
gi|437672065|ref|ZP_20816064.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
8-1]
gi|437694787|ref|ZP_20821862.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
9-7]
gi|437710352|ref|ZP_20826457.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
42-20]
gi|437726123|ref|ZP_20829928.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
gi|437811613|ref|ZP_20841205.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 33944]
gi|437833274|ref|ZP_20844622.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SARB17]
gi|438091448|ref|ZP_20860959.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
81-2625]
gi|438105779|ref|ZP_20866397.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
62-1976]
gi|438114454|ref|ZP_20870070.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
53-407]
gi|440761975|ref|ZP_20941041.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Agona str. SH11G1113]
gi|440768722|ref|ZP_20947687.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Agona str. SH08SF124]
gi|440772486|ref|ZP_20951390.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Agona str. SH10GFN094]
gi|445132410|ref|ZP_21382197.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9184]
gi|445144198|ref|ZP_21386947.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Dublin str. SL1438]
gi|445150703|ref|ZP_21389849.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Dublin str. HWS51]
gi|445172333|ref|ZP_21396424.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE8a]
gi|445214949|ref|ZP_21401733.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 20037]
gi|445232596|ref|ZP_21406109.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE10]
gi|445343521|ref|ZP_21416990.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 13-1]
gi|445354599|ref|ZP_21421498.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. PT23]
gi|452121290|ref|YP_007471538.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Javiana str.
CFSAN001992]
gi|21263472|sp|Q8ZRC0.1|CLPX_SALTY RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|81309773|sp|Q57SB4.1|CLPX_SALCH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|81360133|sp|Q5PFN5.1|CLPX_SALPA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|189044148|sp|A9MWX5.1|CLPX_SALPB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238689941|sp|B5BD82.1|CLPX_SALPK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238690000|sp|B5EXI9.1|CLPX_SALA4 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238690231|sp|B4T9E4.1|CLPX_SALHS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238690324|sp|B5FKV4.1|CLPX_SALDC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238690478|sp|B5R6V0.1|CLPX_SALG2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238690697|sp|B4TMC7.1|CLPX_SALSV RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238693543|sp|B4SWU2.1|CLPX_SALNS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763861|sp|C0Q7X4.1|CLPX_SALPC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|16418956|gb|AAL19404.1| specificity component of clpA-clpP ATP-dependent serine protease,
chaperone [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|56128652|gb|AAV78158.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|62126694|gb|AAX64397.1| specificity component of clpA-clpP ATP-dependent serine protease,
chaperone [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161364721|gb|ABX68489.1| hypothetical protein SPAB_03128 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194404298|gb|ACF64520.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194409786|gb|ACF70005.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194457636|gb|EDX46475.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|194710322|gb|ACF89543.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|195631578|gb|EDX50098.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|197094792|emb|CAR60325.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|197214475|gb|ACH51872.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197241373|gb|EDY23993.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|197289504|gb|EDY28867.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|197937074|gb|ACH74407.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|199602471|gb|EDZ01017.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205271541|emb|CAR36359.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|205330906|gb|EDZ17670.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205333989|gb|EDZ20753.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|205344101|gb|EDZ30865.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|205349962|gb|EDZ36593.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|224466814|gb|ACN44644.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|261245732|emb|CBG23529.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267992165|gb|ACY87050.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|301157060|emb|CBW16544.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|312911482|dbj|BAJ35456.1| ATP-dependent Clp protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|320084723|emb|CBY94514.1| ATP-dependent Clp protease ATP-binding subunit clpX [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|321226027|gb|EFX51078.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|322614727|gb|EFY11656.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322618833|gb|EFY15721.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322623540|gb|EFY20379.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322629161|gb|EFY25940.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322631882|gb|EFY28636.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322637381|gb|EFY34083.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322642066|gb|EFY38676.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322647885|gb|EFY44360.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322652563|gb|EFY48917.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322653275|gb|EFY49608.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322660576|gb|EFY56812.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322664728|gb|EFY60921.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322669219|gb|EFY65369.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322670764|gb|EFY66897.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322678997|gb|EFY75052.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322682026|gb|EFY78051.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322685145|gb|EFY81142.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|322713522|gb|EFZ05093.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
gi|323128769|gb|ADX16199.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
gi|323192961|gb|EFZ78184.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323196957|gb|EFZ82099.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323203942|gb|EFZ88959.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323214176|gb|EFZ98934.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323214500|gb|EFZ99251.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323223057|gb|EGA07400.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323227006|gb|EGA11187.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323230176|gb|EGA14296.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323233914|gb|EGA18003.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323238392|gb|EGA22450.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323244079|gb|EGA28088.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323246240|gb|EGA30223.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323251866|gb|EGA35729.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323257863|gb|EGA41542.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323261124|gb|EGA44716.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323264946|gb|EGA48445.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323272509|gb|EGA55916.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|326622152|gb|EGE28497.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|326626795|gb|EGE33138.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. SG9]
gi|332987398|gb|AEF06381.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
gi|353074865|gb|EHB40625.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Infantis str. SARB27]
gi|353578761|gb|EHC40500.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Adelaide str. A4-669]
gi|353597182|gb|EHC53973.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Give str. S5-487]
gi|353618301|gb|EHC69017.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Johannesburg str. S5-703]
gi|353624601|gb|EHC73596.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
gi|353628151|gb|EHC76287.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Mississippi str. A4-633]
gi|353636600|gb|EHC82615.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. S5-403]
gi|353651590|gb|EHC93637.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
gi|353654324|gb|EHC95628.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Uganda str. R8-3404]
gi|353668980|gb|EHD06017.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
gi|353669716|gb|EHD06540.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Urbana str. R8-2977]
gi|357959982|gb|EHJ84000.1| ATP-dependent protease ATP-binding subunit [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
gi|363549143|gb|EHL33500.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|363554590|gb|EHL38825.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|363557704|gb|EHL41909.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|363564588|gb|EHL48635.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|363565244|gb|EHL49280.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|363571796|gb|EHL55700.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|363578797|gb|EHL62599.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|366056251|gb|EHN20577.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|366065086|gb|EHN29281.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035278]
gi|366065331|gb|EHN29521.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035318]
gi|366071236|gb|EHN35336.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035321]
gi|366073877|gb|EHN37941.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035320]
gi|366080281|gb|EHN44253.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035327]
gi|366084182|gb|EHN48093.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Pomona str. ATCC 10729]
gi|366829496|gb|EHN56372.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|372206384|gb|EHP19888.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008286]
gi|379986041|emb|CCF87815.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Senftenberg str. SS209]
gi|380462078|gb|AFD57481.1| ATP-dependent clp protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. 798]
gi|381299099|gb|EIC40173.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41563]
gi|381300718|gb|EIC41776.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41573]
gi|381301191|gb|EIC42247.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41579]
gi|381310721|gb|EIC51547.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41565]
gi|381312571|gb|EIC53368.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41566]
gi|383797426|gb|AFH44508.1| ATP-dependent Clp protease ATP-binding ClpX [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|392616052|gb|EIW98487.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. Levine 15]
gi|392616386|gb|EIW98819.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. Levine 1]
gi|392733473|gb|EIZ90675.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|392734437|gb|EIZ91619.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|392736738|gb|EIZ93900.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|392747923|gb|EJA04914.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|392750051|gb|EJA07027.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|392754189|gb|EJA11108.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|392755459|gb|EJA12369.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|392763550|gb|EJA20357.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|392763870|gb|EJA20676.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
gi|392769771|gb|EJA26500.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|392776880|gb|EJA33566.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|392778865|gb|EJA35536.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|392790915|gb|EJA47408.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22425]
gi|392791951|gb|EJA48419.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21538]
gi|392798674|gb|EJA54945.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|392803054|gb|EJA59255.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|392814589|gb|EJA70540.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|392815213|gb|EJA71157.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|392822312|gb|EJA78124.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|392826191|gb|EJA81924.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|392827373|gb|EJA83082.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|392831551|gb|EJA87184.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|392840223|gb|EJA95759.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
gi|395980755|gb|EJH89978.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639016-6]
gi|395983275|gb|EJH92468.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
640631]
gi|395989998|gb|EJH99130.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
622731-39]
gi|396000078|gb|EJI09093.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-0424]
gi|396003266|gb|EJI12254.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-6]
gi|396003658|gb|EJI12645.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
485549-17]
gi|396008035|gb|EJI16970.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-70]
gi|396011053|gb|EJI19964.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-26]
gi|396020535|gb|EJI29376.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-22]
gi|396024461|gb|EJI33247.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-46]
gi|396029682|gb|EJI38418.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-50]
gi|396030458|gb|EJI39192.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-37]
gi|396035579|gb|EJI44251.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-2659]
gi|396035932|gb|EJI44603.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
78-1757]
gi|396044340|gb|EJI52937.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-1427]
gi|396052133|gb|EJI60641.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648905
5-18]
gi|396056909|gb|EJI65382.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
22510-1]
gi|396057303|gb|EJI65775.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 8b-1]
gi|396063942|gb|EJI72330.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
58-6482]
gi|396064296|gb|EJI72683.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
50-3079]
gi|396071392|gb|EJI79717.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
6-18]
gi|402515480|gb|EJW22894.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00326]
gi|402516042|gb|EJW23455.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00325]
gi|402516371|gb|EJW23782.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00322]
gi|402531076|gb|EJW38289.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00328]
gi|414023308|gb|EKT06742.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm1]
gi|414023849|gb|EKT07263.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm8]
gi|414025325|gb|EKT08655.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm2]
gi|414037189|gb|EKT19973.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm9]
gi|414038659|gb|EKT21366.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm3]
gi|414042388|gb|EKT24926.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm4]
gi|414051735|gb|EKT33819.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm10]
gi|414053184|gb|EKT35196.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm6]
gi|414057650|gb|EKT39403.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm11]
gi|414061848|gb|EKT43225.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm12]
gi|414067322|gb|EKT47700.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm5]
gi|434965094|gb|ELL58057.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1882]
gi|434967685|gb|ELL60486.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22704]
gi|434975158|gb|ELL67468.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1884]
gi|434982331|gb|ELL74154.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1594]
gi|434988363|gb|ELL79962.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1566]
gi|434991632|gb|ELL83120.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1580]
gi|434997711|gb|ELL88950.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1543]
gi|435000875|gb|ELL91997.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1441]
gi|435007487|gb|ELL98340.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1810]
gi|435011458|gb|ELM02178.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1558]
gi|435017055|gb|ELM07563.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1010]
gi|435018221|gb|ELM08696.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1018]
gi|435028363|gb|ELM18442.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1729]
gi|435030975|gb|ELM20964.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0895]
gi|435039929|gb|ELM29698.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0899]
gi|435041423|gb|ELM31165.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1457]
gi|435045120|gb|ELM34765.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1747]
gi|435050065|gb|ELM39570.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1445]
gi|435053977|gb|ELM43413.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0968]
gi|435054334|gb|ELM43769.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1444]
gi|435059776|gb|ELM49051.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1559]
gi|435060273|gb|ELM49543.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1565]
gi|435066950|gb|ELM56021.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1808]
gi|435074929|gb|ELM63752.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0956]
gi|435078058|gb|ELM66802.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1455]
gi|435081745|gb|ELM70386.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1811]
gi|435096365|gb|ELM84637.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1725]
gi|435096877|gb|ELM85139.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1575]
gi|435099947|gb|ELM88138.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1745]
gi|435101277|gb|ELM89431.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1791]
gi|435111113|gb|ELM99018.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1795]
gi|435113537|gb|ELN01383.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
635290-58]
gi|435114987|gb|ELN02777.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
576709]
gi|435122188|gb|ELN09710.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-19]
gi|435123366|gb|ELN10859.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-16]
gi|435130870|gb|ELN18098.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-9]
gi|435134382|gb|ELN21510.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-2]
gi|435143453|gb|ELN30319.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629163]
gi|435143862|gb|ELN30716.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_N202]
gi|435146441|gb|ELN33234.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE15-1]
gi|435155565|gb|ELN42109.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_56-3991]
gi|435156169|gb|ELN42671.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_76-3618]
gi|435165098|gb|ELN51158.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_81-2490]
gi|435168053|gb|ELN53906.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL909]
gi|435175817|gb|ELN61220.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL913]
gi|435183759|gb|ELN68720.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_69-4941]
gi|435185206|gb|ELN70089.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
13183-1]
gi|435186994|gb|ELN71807.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
638970-15]
gi|435205372|gb|ELN88971.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
22-17]
gi|435206983|gb|ELN90475.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
40-18]
gi|435212165|gb|ELN95190.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22558]
gi|435214886|gb|ELN97634.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
1-1]
gi|435216455|gb|ELN98930.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
4-1]
gi|435223966|gb|ELO05950.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642046
4-7]
gi|435230159|gb|ELO11493.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648898
4-5]
gi|435243442|gb|ELO23700.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648899
3-17]
gi|435243628|gb|ELO23885.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648900
1-16]
gi|435248151|gb|ELO28072.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
1-17]
gi|435250914|gb|ELO30624.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
39-2]
gi|435253180|gb|ELO32668.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648903
1-6]
gi|435260049|gb|ELO39262.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648902
6-8]
gi|435270472|gb|ELO48968.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 653049
13-19]
gi|435278367|gb|ELO56238.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
9-7]
gi|435279707|gb|ELO57451.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
8-1]
gi|435282537|gb|ELO60152.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
gi|435289125|gb|ELO66115.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
42-20]
gi|435292073|gb|ELO68862.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
gi|435297967|gb|ELO74224.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 33944]
gi|435302260|gb|ELO78235.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SARB17]
gi|435315857|gb|ELO89077.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
81-2625]
gi|435321468|gb|ELO93883.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
62-1976]
gi|435328853|gb|ELP00311.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str.
53-407]
gi|436416441|gb|ELP14347.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Agona str. SH08SF124]
gi|436418435|gb|ELP16319.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Agona str. SH10GFN094]
gi|436424267|gb|ELP22050.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Agona str. SH11G1113]
gi|444847338|gb|ELX72488.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Dublin str. SL1438]
gi|444849098|gb|ELX74215.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9184]
gi|444856540|gb|ELX81567.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Dublin str. HWS51]
gi|444859545|gb|ELX84489.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 20037]
gi|444860440|gb|ELX85355.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE8a]
gi|444862184|gb|ELX87044.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE10]
gi|444881325|gb|ELY05369.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. 13-1]
gi|444887689|gb|ELY11382.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Enteritidis str. PT23]
gi|451910294|gb|AGF82100.1| ATP-dependent protease ATP-binding subunit ClpX [Salmonella
enterica subsp. enterica serovar Javiana str.
CFSAN001992]
Length = 423
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRTHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|229828303|ref|ZP_04454372.1| hypothetical protein GCWU000342_00361 [Shuttleworthia satelles DSM
14600]
gi|229792897|gb|EEP29011.1| hypothetical protein GCWU000342_00361 [Shuttleworthia satelles DSM
14600]
Length = 419
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 168/293 (57%), Positives = 219/293 (74%), Gaps = 27/293 (9%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+L PKE+ LD++VIGQ++AKKVLSVAVYNHYKRI + KT
Sbjct: 70 NLKKPKELKAFLDEYVIGQDEAKKVLSVAVYNHYKRIMRGD---------KT-------- 112
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSNVL++GPTGSGKTLLA+TLAR + VPF IADATTLT+AGYVGEDVE+I+ KL+
Sbjct: 113 DVELQKSNVLMLGPTGSGKTLLAQTLARTLGVPFAIADATTLTEAGYVGEDVENIILKLI 172
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE AQ G++YIDE+DKITKK+E+++I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 173 QAADYDVEKAQLGIIYIDEIDKITKKSENVSITRDVSGEGVQQALLKIIEGTMASVPPQG 232
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV--RANMRAGVTDA 497
RKHP+ + IQ+DT +ILFICGGAF LEK I +R + S+GFGA + + N R G
Sbjct: 233 GRKHPQQELIQIDTTNILFICGGAFDGLEKIIEQRIEAGSMGFGANIVDKKNRRIG---- 288
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL V D + +GLIPEF+GR PI V+L LTE+ ++ +LTEPKN+L
Sbjct: 289 ----DLLRQVLPQDFVKFGLIPEFIGRVPINVALNQLTEEDMIHILTEPKNSL 337
>gi|294101894|ref|YP_003553752.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Aminobacterium
colombiense DSM 12261]
gi|293616874|gb|ADE57028.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Aminobacterium colombiense DSM 12261]
Length = 429
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 165/307 (53%), Positives = 219/307 (71%), Gaps = 25/307 (8%)
Query: 248 GGSRWGGSNLG----EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKK 303
GG GS++ +D P P E+ K LD++VIGQE AKK+LSVAVYNH+KRI
Sbjct: 56 GGDSVKGSDVFNVSLKDTPKPAEVKKFLDQYVIGQEDAKKILSVAVYNHFKRI------- 108
Query: 304 GSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQ 363
+ + +D++EL+KSNVLL+GPTGSGKTLLA++LA+ +NVPF +ADATTLT+
Sbjct: 109 --------STMSEENDDIELQKSNVLLIGPTGSGKTLLAQSLAKKLNVPFAMADATTLTE 160
Query: 364 AGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQA 423
AGYVGEDVE+IL +LL A+++++AA++G++YIDE+DKIT+K+ES +I+RDVSGEGVQQA
Sbjct: 161 AGYVGEDVENILVRLLQAADYDIQAAERGIIYIDELDKITRKSESASITRDVSGEGVQQA 220
Query: 424 LLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFG 483
LLK+LEGT+ NVP KG RKHP D IQMDT +ILFICGGAF +E+ I R IGFG
Sbjct: 221 LLKILEGTLSNVPPKGGRKHPYQDFIQMDTSNILFICGGAFAGIEEVIGRRVNKKMIGFG 280
Query: 484 APVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVL 543
+ + L+ V+ DL+A+G IPE +GR P++V L L +D L ++L
Sbjct: 281 GDILS------VKEHRNYELMRQVQPEDLMAFGFIPELIGRLPVVVPLEELDDDALARIL 334
Query: 544 TEPKNAL 550
EPKNAL
Sbjct: 335 VEPKNAL 341
>gi|386617932|ref|YP_006137512.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
NA114]
gi|387828452|ref|YP_003348389.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
SE15]
gi|432420548|ref|ZP_19663106.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE178]
gi|432498682|ref|ZP_19740462.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE216]
gi|432557455|ref|ZP_19794148.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE49]
gi|432693222|ref|ZP_19928437.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE162]
gi|432709269|ref|ZP_19944338.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE6]
gi|432917570|ref|ZP_20122101.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE173]
gi|432924875|ref|ZP_20127014.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE175]
gi|432979942|ref|ZP_20168723.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE211]
gi|433095305|ref|ZP_20281521.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE139]
gi|433104573|ref|ZP_20290596.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE148]
gi|281177609|dbj|BAI53939.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
SE15]
gi|333968433|gb|AEG35238.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
NA114]
gi|430947713|gb|ELC67410.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE178]
gi|431032276|gb|ELD44987.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE216]
gi|431094508|gb|ELE00140.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE49]
gi|431237364|gb|ELF32364.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE162]
gi|431252990|gb|ELF46504.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE6]
gi|431447443|gb|ELH28175.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE173]
gi|431449534|gb|ELH30107.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE175]
gi|431496563|gb|ELH76146.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE211]
gi|431619875|gb|ELI88772.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE139]
gi|431634597|gb|ELJ02838.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE148]
Length = 424
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|294011931|ref|YP_003545391.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sphingobium
japonicum UT26S]
gi|390167377|ref|ZP_10219368.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingobium
indicum B90A]
gi|390167656|ref|ZP_10219637.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingobium
indicum B90A]
gi|292675261|dbj|BAI96779.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sphingobium
japonicum UT26S]
gi|389589722|gb|EIM67736.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingobium
indicum B90A]
gi|389590079|gb|EIM68084.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingobium
indicum B90A]
Length = 422
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 219/306 (71%), Gaps = 28/306 (9%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
GG G + GG +PTP+EIC LD +VIGQ +AK+VLSVAV+NHYKR+ H
Sbjct: 54 GGLVGKKDGG------VPTPQEICDVLDDYVIGQNRAKRVLSVAVHNHYKRLNH------ 101
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
G +P VEL KSN+LL+GPTG GKTLLA+TLA+ +VPF +ADATTLT+A
Sbjct: 102 -GTKP---------GEVELAKSNILLVGPTGCGKTLLAQTLAKTFDVPFTMADATTLTEA 151
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL +++NVE AQ+G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQAL
Sbjct: 152 GYVGEDVENIILKLLQASDYNVEKAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQAL 211
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I +R + SIGFGA
Sbjct: 212 LKLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIGDRLEAKSIGFGA 271
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V A + T LL E DL+ +GLIPEFVGR P++ +L L LVK+L
Sbjct: 272 HVAA------PEERKTGELLRQSEPEDLLKFGLIPEFVGRLPVIATLEDLDVAALVKILV 325
Query: 545 EPKNAL 550
EPKNAL
Sbjct: 326 EPKNAL 331
>gi|225019944|ref|ZP_03709136.1| hypothetical protein CLOSTMETH_03898 [Clostridium methylpentosum
DSM 5476]
gi|224947308|gb|EEG28517.1| hypothetical protein CLOSTMETH_03898 [Clostridium methylpentosum
DSM 5476]
Length = 425
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 163/287 (56%), Positives = 214/287 (74%), Gaps = 23/287 (8%)
Query: 264 PKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVEL 323
P EI K LD++VIGQ+ AK LSVAVYNHYKRI+ A + VEL
Sbjct: 77 PVEIKKVLDEYVIGQDAAKVALSVAVYNHYKRIFAAQ-----------------QEGVEL 119
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
+KSNVLL+GPTG GKTLLA+TLA+ + VPF IADATTLT+AGYVGEDVE++L +L+ A+
Sbjct: 120 QKSNVLLLGPTGVGKTLLAQTLAKILEVPFAIADATTLTEAGYVGEDVENVLLRLIQAAD 179
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKH 443
++VEAA++G++YIDE+DKIT+K+E+++I+RDVSGEGVQQALLK+LEGT+ NVP +G RKH
Sbjct: 180 YDVEAAERGIIYIDEIDKITRKSENVSITRDVSGEGVQQALLKILEGTVSNVPPQGGRKH 239
Query: 444 PRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSL 503
P D IQ+DTK+ILFICGGAF +EK I+ R S++GFGAP++ + A
Sbjct: 240 PNQDFIQIDTKNILFICGGAFEGIEKVINRRMDTSAMGFGAPLKEKKDTTLAQA------ 293
Query: 504 LESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++ +E DL+ +G+IPE VGR P++ +L L ED LVK+L EPKNAL
Sbjct: 294 IKHIEPHDLVRFGMIPEIVGRIPVITALDDLDEDSLVKILREPKNAL 340
>gi|429768433|ref|ZP_19300589.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
diminuta 470-4]
gi|429189123|gb|EKY29970.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
diminuta 470-4]
Length = 422
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 216/290 (74%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI LD +VIGQ AKKVLSVAV+NHYKR+ HA +++
Sbjct: 63 VPTPKEIRDVLDDYVIGQAHAKKVLSVAVHNHYKRLNHAT----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFI GGAF LEK IS R SIGFGA V+ D T
Sbjct: 227 RKHPQQEFLQVDTANILFIVGGAFAGLEKVISARGAGVSIGFGAKVKE------IDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L+ VE DL+ +GLIPEF+GR P+L +L L E L+ +LTEPKNAL
Sbjct: 281 GEILKGVEPDDLMRFGLIPEFIGRLPVLATLEDLDEAALITILTEPKNAL 330
>gi|146282419|ref|YP_001172572.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri A1501]
gi|145570624|gb|ABP79730.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
stutzeri A1501]
Length = 441
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 213/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKK+L+VAVYNHYKR+ D +
Sbjct: 80 LPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRLNQR----------------DKKEE 123
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 124 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 183
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 184 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 243
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ A
Sbjct: 244 RKHPQQEFLQVDTRNILFICGGAFAGLEKVIQSRSTQGGIGFNAEVRSKDPGKKIGEA-- 301
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L +VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL
Sbjct: 302 ---LRAVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALIQILTEPKNAL 348
>gi|417545335|ref|ZP_12196421.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC032]
gi|421666371|ref|ZP_16106463.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC087]
gi|421671117|ref|ZP_16111099.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC099]
gi|400383223|gb|EJP41901.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC032]
gi|410383414|gb|EKP35947.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC099]
gi|410388296|gb|EKP40735.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC087]
Length = 437
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 219/291 (75%), Gaps = 20/291 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG-SGAEPKTAAAVDNDD 319
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G SG K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKR-----LKVGQSGHVSK--------- 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 166 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ +
Sbjct: 226 GRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNK-----DETKK 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE +DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 281 LAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNAL 331
>gi|171910144|ref|ZP_02925614.1| ATP-dependent protease ATP-binding subunit [Verrucomicrobium
spinosum DSM 4136]
Length = 423
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 224/290 (77%), Gaps = 12/290 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P +I LD VIGQ AKKVLSVAV+NHYKRI A + A+ KTAA + +D
Sbjct: 59 VPRPADIMAALDHHVIGQAHAKKVLSVAVHNHYKRILSAQ----ASADRKTAAIGEYND- 113
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+EKSNVLL+GPTG GKTLLAKTLAR +NVPF IADATTLT+AGYVGEDVE+I+ +LL
Sbjct: 114 VEIEKSNVLLVGPTGCGKTLLAKTLARILNVPFSIADATTLTEAGYVGEDVENIILRLLQ 173
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++V A+ G++Y+DE+DKI +K E+++I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 174 AADYDVARAEMGIIYVDEIDKIGRKTENVSITRDVSGEGVQQALLKILEGTVCNVPPQGG 233
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ++T++ILFICGGAFV L++ +++RR +GFG + + DA +T
Sbjct: 234 RKHPQQEYIQVNTENILFICGGAFVGLDQFMAKRRGRKVMGFGNEM---LNREQQDADLT 290
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ V+ DL+ +GLIPEF+GR P++V++ LTE++LV+VLTEPKNAL
Sbjct: 291 ----KDVQPEDLLGFGLIPEFIGRLPVVVAMQQLTEEELVRVLTEPKNAL 336
>gi|292670225|ref|ZP_06603651.1| ATP-dependent Clp protease ATP-binding subunit [Selenomonas noxia
ATCC 43541]
gi|292648177|gb|EFF66149.1| ATP-dependent Clp protease ATP-binding subunit [Selenomonas noxia
ATCC 43541]
Length = 421
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 165/292 (56%), Positives = 218/292 (74%), Gaps = 21/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+D+P PKEI LD++VIGQ++AKK LSVAVYNHYKRI A + +
Sbjct: 59 KDIPKPKEIRHILDQYVIGQDEAKKSLSVAVYNHYKRI---------------NAGQNKN 103
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++VEL KSN+L++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct: 104 EDVELRKSNILMLGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
+ A++++E AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT +VP +
Sbjct: 164 IQAADYDIEKAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQ 223
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF +E+ I R +GFGA VR+ R V
Sbjct: 224 GGRKHPQQELLQIDTTNILFICGGAFDGIEEIIESRLGKKQMGFGAQVRSKKRVTV---- 279
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+LL V DL+ GLIPEF+GR P++V+L +L E LV++LTEPKNAL
Sbjct: 280 --GALLSKVIPEDLMKNGLIPEFIGRLPVVVTLNSLDEKALVRILTEPKNAL 329
>gi|332186790|ref|ZP_08388532.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sphingomonas
sp. S17]
gi|332013123|gb|EGI55186.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sphingomonas
sp. S17]
Length = 420
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 216/290 (74%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ++AK+VLSVAV+NHYKR+ H KG+ +
Sbjct: 61 VPTPQEICNVLDDYVIGQKQAKRVLSVAVHNHYKRLNHG--AKGA--------------D 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 VELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 164
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 165 ASDYNVERAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 224
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I +R Q SIGFGA V A + T
Sbjct: 225 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIGDRLQGKSIGFGAYVAA------PEEKRT 278
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L E DL+ +GLIPEFVGR P++ +L L LVK+L+EPKNAL
Sbjct: 279 GEYLRQTEPEDLLKFGLIPEFVGRLPVIATLEDLDIAALVKILSEPKNAL 328
>gi|320540338|ref|ZP_08039990.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Serratia symbiotica str. Tucson]
gi|320029658|gb|EFW11685.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Serratia symbiotica str. Tucson]
Length = 423
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 165/292 (56%), Positives = 219/292 (75%), Gaps = 22/292 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI + LD +VIGQE+AKKVL+VAVYNHYKR+ +++ G
Sbjct: 63 ELPTPHEIRQHLDDYVIGQEQAKKVLAVAVYNHYKRLRNSDASNG--------------- 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 -VELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ ++N + AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 167 RKCDYNAQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAA 498
RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGFGA V+ G ++ A
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRVNTGSGIGFGATVK-----GESEKA 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL E DLI +GLIPEF+GR P++ +L+ L+ED L+++L EPKNAL
Sbjct: 282 TEGELLLQAEPEDLINFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNAL 333
>gi|119473284|ref|ZP_01614936.1| ATP-dependent protease ATP-binding subunit [Alteromonadales
bacterium TW-7]
gi|359447957|ref|ZP_09237513.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas sp. BSi20480]
gi|392538774|ref|ZP_10285911.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoalteromonas
marina mano4]
gi|119444507|gb|EAW25827.1| ATP-dependent protease ATP-binding subunit [Alteromonadales
bacterium TW-7]
gi|358046181|dbj|GAA73762.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas sp. BSi20480]
Length = 427
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 166/296 (56%), Positives = 224/296 (75%), Gaps = 28/296 (9%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI K LD +VIGQ+ AKKVLSVAVYNHYKR+ + + K+ +
Sbjct: 67 LPVPKEIRKHLDDYVIGQDHAKKVLSVAVYNHYKRLRNQSTKQ----------------D 110
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 IELSKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 170
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 171 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 230
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R +++ IGFG V+ ++A
Sbjct: 231 RKHPQQEFLQVDTSKILFICGGAFSGLDKVIEQRSHKNTGIGFGVSVK--------ESAE 282
Query: 500 TSSLLES---VESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGQ 552
T SL E+ VE DL+ YGLIPEF+GR P++ +LT L E LV++L+EPKNA+ +
Sbjct: 283 TRSLSETFKDVEPEDLVKYGLIPEFIGRLPVVATLTELDEAALVQILSEPKNAITK 338
>gi|269214372|ref|ZP_05986447.2| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
lactamica ATCC 23970]
gi|269209943|gb|EEZ76398.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
lactamica ATCC 23970]
Length = 442
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 212/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK N
Sbjct: 92 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKVGG------N 135
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 136 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 195
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 196 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 255
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 256 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 310
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL
Sbjct: 311 TKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNAL 360
>gi|148560290|ref|YP_001259030.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella ovis ATCC
25840]
gi|166214760|sp|A5VQN3.1|CLPX_BRUO2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|148371547|gb|ABQ61526.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella ovis
ATCC 25840]
Length = 427
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 161/292 (55%), Positives = 219/292 (75%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF++ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFIMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL
Sbjct: 281 RIGEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNAL 332
>gi|386287808|ref|ZP_10064979.1| ATP-dependent protease ATP-binding subunit ClpX [gamma
proteobacterium BDW918]
gi|385279318|gb|EIF43259.1| ATP-dependent protease ATP-binding subunit ClpX [gamma
proteobacterium BDW918]
Length = 424
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/301 (55%), Positives = 222/301 (73%), Gaps = 21/301 (6%)
Query: 251 RWGGSNLGED-LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+ S G D LPTP+EI LD++VIGQ +AKKVL+VAVYNHYKR+ +KG
Sbjct: 54 QEAASEAGRDKLPTPQEINHTLDQYVIGQVRAKKVLAVAVYNHYKRLRVG--EKGK---- 107
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D++EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGE
Sbjct: 108 ---------DDIELGKSNILLIGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGE 158
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 159 DVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIE 218
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I +R + IGF A V++
Sbjct: 219 GTVASVPPQGGRKHPQQEFLQVDTSNILFICGGAFAGLDRVIRDRSEKGGIGFSAEVKSK 278
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
++A +L VE DL+ YGLIPEFVGR P++ +L L D LV +LTEPKNA
Sbjct: 279 -----SEARNVGEILADVEPDDLVRYGLIPEFVGRLPVIATLEELDIDALVSILTEPKNA 333
Query: 550 L 550
L
Sbjct: 334 L 334
>gi|386020702|ref|YP_005938726.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri DSM 4166]
gi|327480674|gb|AEA83984.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri DSM 4166]
Length = 426
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 213/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKK+L+VAVYNHYKR+ D +
Sbjct: 65 LPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRLNQR----------------DKKEE 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ A
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFAGLEKVIQSRSTQGGIGFNAEVRSKDPGKKIGEA-- 286
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L +VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL
Sbjct: 287 ---LRAVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALIQILTEPKNAL 333
>gi|148381179|ref|YP_001255720.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum A str. ATCC 3502]
gi|153932077|ref|YP_001385554.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum A str. ATCC 19397]
gi|153935476|ref|YP_001388960.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum A str. Hall]
gi|153938984|ref|YP_001392581.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum F str. Langeland]
gi|168179120|ref|ZP_02613784.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum NCTC 2916]
gi|168183547|ref|ZP_02618211.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum Bf]
gi|170756735|ref|YP_001782869.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum B1 str. Okra]
gi|226950658|ref|YP_002805749.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum A2 str. Kyoto]
gi|237796686|ref|YP_002864238.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum Ba4 str. 657]
gi|384463548|ref|YP_005676143.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
botulinum F str. 230613]
gi|387819500|ref|YP_005679847.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
botulinum H04402 065]
gi|421839010|ref|ZP_16272697.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum CFSAN001627]
gi|429247533|ref|ZP_19210775.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum CFSAN001628]
gi|166989835|sp|A7FYI1.1|CLPX_CLOB1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167008726|sp|A5I6W0.1|CLPX_CLOBH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167009011|sp|A7GIH1.1|CLPX_CLOBL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|229889850|sp|B1IND6.1|CLPX_CLOBK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763840|sp|C1FLA5.1|CLPX_CLOBJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|259491253|sp|C3KU76.1|CLPX_CLOB6 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|148290663|emb|CAL84792.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
botulinum A str. ATCC 3502]
gi|152928121|gb|ABS33621.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum A str. ATCC 19397]
gi|152931390|gb|ABS36889.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum A str. Hall]
gi|152934880|gb|ABS40378.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum F str. Langeland]
gi|169121947|gb|ACA45783.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum B1 str. Okra]
gi|182670079|gb|EDT82055.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum NCTC 2916]
gi|182673331|gb|EDT85292.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum Bf]
gi|226844071|gb|ACO86737.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum A2 str. Kyoto]
gi|229262137|gb|ACQ53170.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum Ba4 str. 657]
gi|295320565|gb|ADG00943.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum F str. 230613]
gi|322807544|emb|CBZ05119.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
botulinum H04402 065]
gi|409736335|gb|EKN37767.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum CFSAN001627]
gi|428755427|gb|EKX78056.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum CFSAN001628]
Length = 429
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 218/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQE AKK LSVAVYNHYKRI ++N N+D+
Sbjct: 60 LPKPTEIKTYLDQYVIGQEDAKKSLSVAVYNHYKRI-NSNT---------------NNDD 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELQKSNILLLGPTGSGKTLLAQTLAKFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ VP +G
Sbjct: 164 NADYDIEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVAAVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I R + SS+GFGA +++ +
Sbjct: 224 RKHPHQEFIQINTTNILFICGGAFDGVDKIIERRTRTSSLGFGAEIQSKKEKDL------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL+ + DL+ +GLIPEF+GR PI+V+L L + L+K+LTEPKNAL
Sbjct: 278 GKLLKDIMPGDLLKFGLIPEFIGRLPIVVTLDKLDREALIKILTEPKNAL 327
>gi|332283983|ref|YP_004415894.1| ATP-dependent protease ATP-binding subunit ClpX [Pusillimonas sp.
T7-7]
gi|330427936|gb|AEC19270.1| ATP-dependent protease ATP-binding subunit ClpX [Pusillimonas sp.
T7-7]
Length = 435
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 213/291 (73%), Gaps = 21/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP+EI LD +VIGQ+ K+ L+VAVYNHYKRI + +K D
Sbjct: 63 ELPTPEEIKSFLDGYVIGQDTPKRTLAVAVYNHYKRIRYGEIKG---------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIVQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++V+ AQ+ ++YIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYDVDKAQRAIIYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFI GGAF L+K I +R + S IGF A VRA GV
Sbjct: 228 GRKHPNQDFVQVDTTNILFIVGGAFDGLDKVIRDRTERSGIGFSASVRAKAERGV----- 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE DLI +GLIPE VGR P+L +L L ED LV++LTEP+N+L
Sbjct: 283 -GELFAEVEPEDLIKFGLIPELVGRLPVLATLEELQEDTLVRILTEPRNSL 332
>gi|359461616|ref|ZP_09250179.1| ATP-dependent protease ATP-binding subunit ClpX [Acaryochloris sp.
CCMEE 5410]
Length = 447
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 162/292 (55%), Positives = 217/292 (74%), Gaps = 17/292 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P++I LD+ VIGQ++AKKVLSVAVYNHYKR+ + S AE DD
Sbjct: 78 IPKPRDIKSYLDEHVIGQDEAKKVLSVAVYNHYKRLSISQASAESVAEL--------DDA 129
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL+KSN+LL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +LL
Sbjct: 130 IELQKSNILLIGPTGCGKTLLAQTLAQMLDVPFAVADATTLTEAGYVGEDVENILLRLLQ 189
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+ +VE AQ+G++YIDE+DK+ +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +G
Sbjct: 190 VADLDVEEAQRGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQGG 249
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGF--GAPVRANMRAGVTDAA 498
RKHP D IQ+DT +ILFICGGAFV L+K I +R ++GF +RA +
Sbjct: 250 RKHPYQDCIQIDTTNILFICGGAFVGLDKIIEQRTGKKAMGFIQDGELRAKEQR------ 303
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T+ +L +E+ DL+ +G+IPEF GR P++ + AL ED L ++LTEP+NAL
Sbjct: 304 -TADMLRDLEAEDLVKFGMIPEFTGRIPVMSVIDALDEDVLCQILTEPRNAL 354
>gi|357040210|ref|ZP_09101999.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Desulfotomaculum gibsoniae DSM 7213]
gi|355356874|gb|EHG04655.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Desulfotomaculum gibsoniae DSM 7213]
Length = 416
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 173/299 (57%), Positives = 222/299 (74%), Gaps = 27/299 (9%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
G LG D+P PKEI LD++VIGQ+ AKK L+VAVYNHYKRI NL G +
Sbjct: 52 GLELG-DIPKPKEIKDILDQYVIGQDSAKKSLAVAVYNHYKRI---NL----GGKI---- 99
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
D+VEL+KSN++++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+
Sbjct: 100 -----DDVELQKSNIVMLGPTGSGKTLLAQTLARLLNVPFAIADATSLTEAGYVGEDVEN 154
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
IL KL+ A+++VE A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+
Sbjct: 155 ILLKLIQAADYDVEKAERGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVA 214
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV--RANMR 491
+VP +G RKHP + IQ+DT +ILFICGGAF +EK I R +GFGA + + MR
Sbjct: 215 SVPPQGGRKHPHQEFIQLDTTNILFICGGAFDGIEKIIQNRTGKKVMGFGAEIKPKQEMR 274
Query: 492 AGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
G +L + DL+ YGLIPEFVGR PI+V+L AL ED LV++LTEP+NAL
Sbjct: 275 IG--------EILSHILPEDLLRYGLIPEFVGRLPIIVTLDALDEDALVRILTEPRNAL 325
>gi|333977878|ref|YP_004515823.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Desulfotomaculum kuznetsovii DSM 6115]
gi|333821359|gb|AEG14022.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Desulfotomaculum kuznetsovii DSM 6115]
Length = 416
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 169/297 (56%), Positives = 223/297 (75%), Gaps = 23/297 (7%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
G +LG D+P PKEI + LD++VIGQE+AKK L+VAVYNHYKRI NL G +
Sbjct: 52 GLDLG-DIPKPKEIKEILDQYVIGQEQAKKTLAVAVYNHYKRI---NL----GGKI---- 99
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
D+VEL+KSN++++GPTG GKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+
Sbjct: 100 -----DDVELQKSNIIMLGPTGCGKTLLAQTLARLLNVPFAIADATSLTEAGYVGEDVEN 154
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
IL KL+ A+++VE A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+
Sbjct: 155 ILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVA 214
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 493
+VP +G RKHP + IQ+DT +ILFICGGAF +EK I R +GFGA +++
Sbjct: 215 SVPPQGGRKHPHQEFIQLDTTNILFICGGAFDGIEKIIQNRIGKKGLGFGAEIQSRRDQK 274
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +L + DL+ YGLIPEFVGR PI+V+L AL E+ L+++LTEPKNAL
Sbjct: 275 I------GEILSQILPEDLLKYGLIPEFVGRLPIIVTLDALDEEALIRILTEPKNAL 325
>gi|311280665|ref|YP_003942896.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Enterobacter
cloacae SCF1]
gi|308749860|gb|ADO49612.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Enterobacter
cloacae SCF1]
Length = 424
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 217/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQEKAKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEKAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+A ++ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK-----SEKAN 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL E DLI +GLIPEF+GR P++ +L L+ED L+++L EPKNAL
Sbjct: 283 EGELLAQAEPEDLIKFGLIPEFIGRLPVVATLNELSEDALIQILKEPKNAL 333
>gi|423138927|ref|ZP_17126565.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. houtenae str. ATCC BAA-1581]
gi|379051481|gb|EHY69372.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Salmonella
enterica subsp. houtenae str. ATCC BAA-1581]
Length = 423
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRIHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L+ L+E+ L+++L EPKNAL
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILKEPKNAL 333
>gi|163857102|ref|YP_001631400.1| ATP-dependent protease ATP-binding subunit ClpX [Bordetella petrii
DSM 12804]
gi|229889853|sp|A9IR50.1|CLPX_BORPD RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|163260830|emb|CAP43132.1| ATP-dependent Clp protease ATP-binding subunit [Bordetella petrii]
Length = 432
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 211/291 (72%), Gaps = 21/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI LD++VIGQ K++L+VAVYNHYKRI H +K D
Sbjct: 63 ELPTPSEIKTFLDQYVIGQTLPKRMLAVAVYNHYKRIRHGEIK---------------GD 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN++L+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 EVELSKSNIMLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+ ++YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVEKAQRAIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFI GGAF LEK I +R + S IGF A VRA GV +
Sbjct: 228 GRKHPNQDFVQVDTTNILFIVGGAFDGLEKVIRDRTEKSGIGFSASVRAKSERGVGE--- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE DLI +GLIPE VGR P++ +L L E LV++LTEPKN+L
Sbjct: 285 ---LFSEVEPEDLIKFGLIPELVGRLPVVATLDELDEAALVQILTEPKNSL 332
>gi|153009535|ref|YP_001370750.1| ATP-dependent protease ATP-binding subunit ClpX [Ochrobactrum
anthropi ATCC 49188]
gi|404319232|ref|ZP_10967165.1| ATP-dependent protease ATP-binding subunit ClpX [Ochrobactrum
anthropi CTS-325]
gi|166214795|sp|A6X117.1|CLPX_OCHA4 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|151561423|gb|ABS14921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ochrobactrum
anthropi ATCC 49188]
Length = 424
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 163/292 (55%), Positives = 216/292 (73%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KS 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA VR+ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL
Sbjct: 281 RIGDVFRELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNAL 332
>gi|421563572|ref|ZP_16009391.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM2795]
gi|421907102|ref|ZP_16336990.1| ClpX, ATPase regulatory subunit [Neisseria meningitidis alpha704]
gi|393292066|emb|CCI72963.1| ClpX, ATPase regulatory subunit [Neisseria meningitidis alpha704]
gi|402341268|gb|EJU76455.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM2795]
Length = 414
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 212/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK N
Sbjct: 64 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKVGG------N 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 108 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 228 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL
Sbjct: 283 TKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNAL 332
>gi|424826850|ref|ZP_18251701.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
sporogenes PA 3679]
gi|365980551|gb|EHN16577.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
sporogenes PA 3679]
Length = 429
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 218/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQE AKK LSVAVYNHYKRI ++N N+D+
Sbjct: 60 LPKPTEIKTYLDQYVIGQEDAKKSLSVAVYNHYKRI-NSNT---------------NNDD 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELQKSNILLLGPTGSGKTLLAQTLAKFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ VP +G
Sbjct: 164 NADYDIERAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVAAVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I R + SS+GFGA +++ +
Sbjct: 224 RKHPHQEFIQINTTNILFICGGAFDGVDKIIERRTRTSSLGFGAEIQSKKEKDL------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL+ + DL+ +GLIPEF+GR PI+V+L L + L+K+LTEPKNAL
Sbjct: 278 GKLLKDIMPGDLLKFGLIPEFIGRLPIVVTLDKLDREALIKILTEPKNAL 327
>gi|146295916|ref|YP_001179687.1| ATP-dependent protease ATP-binding subunit ClpX
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|166214768|sp|A4XHW1.1|CLPX_CALS8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|145409492|gb|ABP66496.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 433
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 160/290 (55%), Positives = 221/290 (76%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI + LD++V+GQ+ AKK+LSVAVYNHYKRIY+ + +K D+
Sbjct: 61 LPTPKEIKEFLDQYVVGQDHAKKILSVAVYNHYKRIYYHDNRK---------------DD 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE++KSN+L++GPTGSGKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 106 VEIQKSNILMLGPTGSGKTYLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRLIQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G+VYIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 166 NADYDIERAERGIVYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF +EK I R + ++GF A + + + D
Sbjct: 226 RKHPHQEFIQIDTTNILFICGGAFEGIEKIIERRIGEKTLGFNAKIESKKEKKIGD---- 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L + DL+ +G+IPEF+GR PI+V+L AL ++ L+K+LTEPKNAL
Sbjct: 282 --ILRQIMPQDLLKFGMIPEFIGRVPIIVTLDALDKEALIKILTEPKNAL 329
>gi|15895897|ref|NP_349246.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
acetobutylicum ATCC 824]
gi|337737850|ref|YP_004637297.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
acetobutylicum DSM 1731]
gi|384459360|ref|YP_005671780.1| ATP-dependent protease ATP-binding subunit [Clostridium
acetobutylicum EA 2018]
gi|21263476|sp|Q97FT7.1|CLPX_CLOAB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|15025666|gb|AAK80586.1|AE007761_5 ATP-dependent protease Clp, ATPase subunit ClpX [Clostridium
acetobutylicum ATCC 824]
gi|325510049|gb|ADZ21685.1| ATP-dependent protease ATP-binding subunit [Clostridium
acetobutylicum EA 2018]
gi|336292453|gb|AEI33587.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
acetobutylicum DSM 1731]
Length = 432
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 162/290 (55%), Positives = 221/290 (76%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++V+GQE AKK LSVAVYNHYKRI ++NL N+D+
Sbjct: 60 LPKPSEIKDYLDQYVVGQEDAKKSLSVAVYNHYKRI-NSNLS--------------NNDD 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL+KSN+LL+GPTG GKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 105 IELQKSNILLLGPTGCGKTFLAQTLAKFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 164
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 165 NADYDVERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 224
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I R + S+IGFGA +++ + +
Sbjct: 225 RKHPHQEFIQINTTNILFICGGAFDGVDKIIENRTRVSTIGFGASIQSKQQKDI------ 278
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++L+ + DL+ +GLIPEF+GR PI+V+L +L + LVKVL+EPKNAL
Sbjct: 279 GAILKKIMPGDLLKFGLIPEFIGRLPIIVTLNSLDQGALVKVLSEPKNAL 328
>gi|258516486|ref|YP_003192708.1| ATP-dependent protease ATP-binding subunit ClpX [Desulfotomaculum
acetoxidans DSM 771]
gi|257780191|gb|ACV64085.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Desulfotomaculum acetoxidans DSM 771]
Length = 416
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 220/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+P PKEI + LD++VIGQE AKK L+VAVYNHYKRI NL G + D
Sbjct: 57 DVPKPKEIKEILDQYVIGQESAKKALAVAVYNHYKRI---NL----GGKI---------D 100
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN++++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 101 DVELQKSNIVMLGPTGSGKTLLAQTLARLLNVPFAIADATSLTEAGYVGEDVENILLKLI 160
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 161 QAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 220
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT ++LFICGGAF ++K I R S+GFGA ++A +
Sbjct: 221 GRKHPHQEFIQLDTTNVLFICGGAFDGIDKIIQNRTGKKSMGFGAEIKAMREQRI----- 275
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L ++ DL+ YGLIPEFVGR P++V+L L ED LV++LTEP+NAL
Sbjct: 276 -GEILSNILPEDLLKYGLIPEFVGRLPVIVTLDMLDEDALVRILTEPRNAL 325
>gi|157363410|ref|YP_001470177.1| ATP-dependent protease ATP-binding subunit ClpX [Thermotoga
lettingae TMO]
gi|157314014|gb|ABV33113.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermotoga
lettingae TMO]
Length = 404
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 164/293 (55%), Positives = 218/293 (74%), Gaps = 26/293 (8%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP P EI LDK+VIGQEKAK+V+SVAVYNHYKR+++ + DNDD
Sbjct: 52 ELPKPAEIKAELDKYVIGQEKAKRVISVAVYNHYKRVFYES---------------DNDD 96
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VE+EKSN++L+GPTGSGKTL+A+ LA+ ++VPF IADAT LT+AGYVGEDVE+++ +LL
Sbjct: 97 -VEIEKSNIMLIGPTGSGKTLIARVLAKILDVPFAIADATPLTEAGYVGEDVENVILRLL 155
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A F+VE Q G+VYIDE+DKI +K+ + +I+RDVSGEGVQQALLK++EGT+ NVP +G
Sbjct: 156 EVAHFDVERTQYGIVYIDEIDKIARKSPNPSITRDVSGEGVQQALLKIVEGTVANVPPQG 215
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN--MRAGVTDA 497
RKHP + I++DT +ILFI GGAF LE+ + R QDSS+GFGA +++ MR G
Sbjct: 216 GRKHPYQEFIKVDTSNILFIVGGAFDGLEEIVKRRIQDSSMGFGADIKSKKRMRLG---- 271
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L V DL+ YG+IPEFVGRFP++ +L LTE+ LV++L EPKNA+
Sbjct: 272 ----EILSHVVPDDLVQYGMIPEFVGRFPVIATLDDLTEEDLVRILNEPKNAI 320
>gi|437763920|ref|ZP_20834984.1| ATP-dependent protease ATP-binding subunit ClpX, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 76-2651]
gi|435308366|gb|ELO83329.1| ATP-dependent protease ATP-binding subunit ClpX, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 76-2651]
Length = 358
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRTHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|170761592|ref|YP_001788550.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum A3 str. Loch Maree]
gi|238688794|sp|B1L1D6.1|CLPX_CLOBM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|169408581|gb|ACA56992.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum A3 str. Loch Maree]
Length = 429
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 218/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQE AKK LSVAVYNHYKRI ++N N+D+
Sbjct: 60 LPKPTEIKTYLDQYVIGQEDAKKSLSVAVYNHYKRI-NSNT---------------NNDD 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELQKSNILLLGPTGSGKTLLAQTLAKFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ VP +G
Sbjct: 164 NADYDIEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVAAVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I R + SS+GFGA +++ +
Sbjct: 224 RKHPHQEFIQINTTNILFICGGAFDGVDKIIERRTRTSSLGFGAEIQSKKEKDL------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL+ + DL+ +GLIPEF+GR PI+V+L L + L+K+LTEPKNAL
Sbjct: 278 GKLLKDIMPGDLLKFGLIPEFIGRLPIVVTLDKLDREALIKILTEPKNAL 327
>gi|15642920|ref|NP_227961.1| ATP-dependent protease ATP-binding subunit ClpX [Thermotoga
maritima MSB8]
gi|418046082|ref|ZP_12684176.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermotoga
maritima MSB8]
gi|8134367|sp|Q9WXZ3.1|CLPX_THEMA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|4980639|gb|AAD35239.1|AE001700_3 ATP-dependent Clp protease, ATPase subunit clpX [Thermotoga
maritima MSB8]
gi|351675635|gb|EHA58795.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermotoga
maritima MSB8]
Length = 406
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 166/294 (56%), Positives = 221/294 (75%), Gaps = 26/294 (8%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+++PTP EI LDK++IGQE+AKKVLSVAVYNHYKR++ +NL +
Sbjct: 53 KEIPTPAEIKAELDKYIIGQERAKKVLSVAVYNHYKRVF-SNL---------------DS 96
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++VE+EKSNVLL+GPTG+GKT LA+ LA+ +NVPF IADAT LT+AGYVGEDVE+++ +L
Sbjct: 97 NDVEIEKSNVLLIGPTGTGKTYLARILAKILNVPFAIADATPLTEAGYVGEDVENVVLRL 156
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A F+VE AQ G++YIDE+DKI KK+ + +I+RDVSGEGVQQALLK+LEGTI NVP +
Sbjct: 157 LEAANFDVERAQYGIIYIDEIDKIAKKSPNPSITRDVSGEGVQQALLKILEGTIANVPPQ 216
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTD 496
G RKHP + I++DT++ILFI GGAF LE+ I R Q +++GFGA +++ MR G
Sbjct: 217 GGRKHPYQEFIKVDTRNILFIAGGAFDGLEEIIKRRIQSTTMGFGAEIKSKKEMRLG--- 273
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L+ V DL+ YGLIPEFVGRFP++ +L L+ED LV++L EPKNA+
Sbjct: 274 -----EILKHVTPDDLVQYGLIPEFVGRFPVIATLDDLSEDDLVRILKEPKNAV 322
>gi|71729634|gb|EAO31738.1| ClpX, ATPase regulatory subunit [Xylella fastidiosa Ann-1]
Length = 426
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 217/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI + LD++VIGQ++AK+ L+VAVYNHYKRI + +D+
Sbjct: 66 LPKPKEILEVLDQYVIGQQRAKRTLAVAVYNHYKRIESRH----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQHGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R + IGFG V+++
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRCTEVGGIGFGVKVKSS-----ESKRD 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPEFVGR P++ +L L E LVK+LTEPKNA+
Sbjct: 285 VGKVLAGVEPEDLIKFGLIPEFVGRLPVVATLDELDESALVKILTEPKNAI 335
>gi|269213481|ref|ZP_06157997.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
cinerea ATCC 14685]
gi|269146222|gb|EEZ72640.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
cinerea ATCC 14685]
Length = 394
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 212/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK N
Sbjct: 44 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKAGC------N 87
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 88 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 147
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 148 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 207
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 208 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 262
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL
Sbjct: 263 TKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNAL 312
>gi|374619901|ref|ZP_09692435.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [gamma
proteobacterium HIMB55]
gi|374303128|gb|EHQ57312.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [gamma
proteobacterium HIMB55]
Length = 425
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 216/290 (74%), Gaps = 20/290 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI LD++VIGQ +AK+VLSVAVYNHYKR L+ G G + +
Sbjct: 64 LPVPREINDILDQYVIGQSRAKRVLSVAVYNHYKR-----LRTGEG----------TNSD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLVGPTGSGKTLLAETLARMLDVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I R IGF A V+A + D
Sbjct: 229 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIQNRSDKGGIGFSADVKA-----LADKKDF 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L +E+ DL+ YGLIPEFVGR P++ +L L D LV++LTEPKNAL
Sbjct: 284 AESLVDLEAEDLVQYGLIPEFVGRLPMIATLEELDVDALVQILTEPKNAL 333
>gi|326386906|ref|ZP_08208520.1| ATP-dependent protease ATP-binding subunit [Novosphingobium
nitrogenifigens DSM 19370]
gi|326208586|gb|EGD59389.1| ATP-dependent protease ATP-binding subunit [Novosphingobium
nitrogenifigens DSM 19370]
Length = 417
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 169/306 (55%), Positives = 221/306 (72%), Gaps = 28/306 (9%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G + GG +PTP++I + L+ +VIGQ++AK+VLSVAV+NHYKR+ H+ G
Sbjct: 54 AGIAGKKDGG------VPTPRDIFETLNDYVIGQDRAKRVLSVAVHNHYKRLKHS----G 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
G E VEL KSN+LL+GPTGSGKTLLA+TLA+ +VPF +ADATTLT+A
Sbjct: 104 KGGE------------VELSKSNILLVGPTGSGKTLLAQTLAKTFDVPFTMADATTLTEA 151
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL +++NVE AQ G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQAL
Sbjct: 152 GYVGEDVENIILKLLQASDYNVEKAQHGIVYIDEIDKISRKAENPSITRDVSGEGVQQAL 211
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF LE+ I++R Q SIGFGA
Sbjct: 212 LKLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLERIIADRLQKRSIGFGA 271
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V D LL+ E DL+ +GLIPEFVGR P++ +L L D LV++L
Sbjct: 272 HV------ADPDKRRVGELLQKAEPEDLLKFGLIPEFVGRLPVIATLNDLDIDALVRILR 325
Query: 545 EPKNAL 550
EPKNAL
Sbjct: 326 EPKNAL 331
>gi|83644979|ref|YP_433414.1| ATP-dependent protease ATP-binding subunit ClpX [Hahella chejuensis
KCTC 2396]
gi|123533762|sp|Q2SK35.1|CLPX_HAHCH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|83633022|gb|ABC28989.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Hahella
chejuensis KCTC 2396]
Length = 427
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 164/296 (55%), Positives = 221/296 (74%), Gaps = 21/296 (7%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
S+ + LPTP EI + LD +VIGQ +AK L+VAVYNHYKR+ + + KKG
Sbjct: 61 SDSSDRLPTPHEIKETLDDYVIGQTRAKLALAVAVYNHYKRLRYED-KKG---------- 109
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I
Sbjct: 110 -----EVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENI 164
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
+ KLL + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +
Sbjct: 165 IQKLLQKCDYDVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAS 224
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I +R + SIGF A V++ +
Sbjct: 225 VPPQGGRKHPQQEFLQVDTSNILFICGGAFAGLEKIIRDRAEKGSIGFSAVVKSQL---- 280
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L+ VE+ DLI +GLIPEFVGR P++ +L L E L+++LT+P+NAL
Sbjct: 281 -SSKSVGETLKDVETEDLIKFGLIPEFVGRLPVIATLDELDEAALIQILTQPRNAL 335
>gi|407071671|ref|ZP_11102509.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
cyclitrophicus ZF14]
Length = 426
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 218/293 (74%), Gaps = 21/293 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP+EI + LD +VIGQE AKKVL+VAVYNHYKR+ + + T A
Sbjct: 63 ESLPTPREIREHLDDYVIGQEYAKKVLAVAVYNHYKRLRNGD----------TTA----- 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 EGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + S IGFGA VR+ +
Sbjct: 228 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVETGSGIGFGAEVRSK-----DET 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE DL+ YGLIPEF+GR P+ +LT L E+ L+++L EPKNAL
Sbjct: 283 KTIGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNAL 335
>gi|451818369|ref|YP_007454570.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451784348|gb|AGF55316.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 429
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 220/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P EI + LD +VIGQE+AKK L+VAVYNHYKRI N K + +
Sbjct: 60 VPKPNEIKEYLDSYVIGQERAKKSLAVAVYNHYKRI---NTNK-------------EEMD 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELSKSNILLLGPTGSGKTLLAQTLARFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 NADYDVEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I +R + SS+GFGA ++A V
Sbjct: 224 RKHPHQEFIQINTSNILFICGGAFDGVDKIIEKRTRKSSMGFGAEIQAKHEKDV------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SLL+ + +DL+ +GLIPEFVGR PILV+L +L + L+++LT+PKNAL
Sbjct: 278 GSLLKEIMPADLLKFGLIPEFVGRLPILVTLESLDREALIQILTKPKNAL 327
>gi|418293282|ref|ZP_12905195.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
gi|379064678|gb|EHY77421.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
Length = 426
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 213/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKK+L+VAVYNHYKR+ D +
Sbjct: 65 LPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRLNQR----------------DKKEE 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ A
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFAGLEKVIQGRSTQGGIGFNAEVRSKDPGKKIGEA-- 286
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L +VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL
Sbjct: 287 ---LRAVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALIQILTEPKNAL 333
>gi|377809581|ref|YP_005004802.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pediococcus
claussenii ATCC BAA-344]
gi|361056322|gb|AEV95126.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pediococcus
claussenii ATCC BAA-344]
Length = 419
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 219/291 (75%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+PTP +I + L+++VIGQE+AKK LSVAVYNHYKRI ++ +++D
Sbjct: 63 DVPTPNDIVEHLNQYVIGQEEAKKTLSVAVYNHYKRINQMEVQ-------------EDED 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 110 APELQKSNISLIGPTGSGKTFLAQSLAKILNVPFAIADATTLTEAGYVGEDVENILLKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++NVE A++G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGT NVP +G
Sbjct: 170 QNADYNVEQAERGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTTANVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFI GGAF +E + R D +IGFG +N + + + A
Sbjct: 230 GRKHPQQEFIQIDTTNILFIVGGAFDGIETIVKNRLGDKTIGFG----SNSKTQLDEEA- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL++ V DL+ +GLIPEF+GR PIL +L LT + LV++LTEPKNAL
Sbjct: 285 --SLMQQVVPEDLLKFGLIPEFIGRLPILTALEKLTTEDLVRILTEPKNAL 333
>gi|428206836|ref|YP_007091189.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Chroococcidiopsis thermalis PCC 7203]
gi|428008757|gb|AFY87320.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Chroococcidiopsis thermalis PCC 7203]
Length = 446
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 169/298 (56%), Positives = 222/298 (74%), Gaps = 13/298 (4%)
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
GG +L + +P P+EI LD+ VIGQ++AKKVLSVAVYNHYKR+ K SG K
Sbjct: 71 GGISLNQ-IPKPREIKAHLDEHVIGQDEAKKVLSVAVYNHYKRLSLVQSKNSSG---KAG 126
Query: 313 AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVE 372
A +D VEL+KSN+LL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE
Sbjct: 127 A----EDIVELQKSNILLIGPTGCGKTLLAQTLAQILDVPFAVADATTLTEAGYVGEDVE 182
Query: 373 SILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI 432
+IL +LL A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+
Sbjct: 183 NILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTV 242
Query: 433 VNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA 492
NVP +G RKHP D IQ+DT +ILFICGGAFV LEK + +R SIGF P
Sbjct: 243 ANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLEKVVEQRIGKKSIGFIQP-----GE 297
Query: 493 GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
G++ T+ +L +E DL+ +G+IPEF+GR P++ + L E+ LV +LT+PK+AL
Sbjct: 298 GLSREKRTADILVHLEPDDLVKFGMIPEFIGRVPMVAVVEPLDEEALVAILTQPKSAL 355
>gi|395786090|ref|ZP_10465818.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
tamiae Th239]
gi|423717016|ref|ZP_17691206.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
tamiae Th307]
gi|395424548|gb|EJF90735.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
tamiae Th239]
gi|395427805|gb|EJF93888.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
tamiae Th307]
Length = 424
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 160/290 (55%), Positives = 216/290 (74%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +V+GQ AK+VLSVAV+NHYKR+ H + + D+
Sbjct: 65 VPTPQEIITVLDDYVVGQTHAKRVLSVAVHNHYKRLAHQS----------------SSDD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELSKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGFGA V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISARGEKTSIGFGATVKA------VDERRI 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +E DL+ +GLIPEFVGR P++ +L L D LV++L++PKNAL
Sbjct: 283 GEIFHDLEPEDLLKFGLIPEFVGRLPVIATLEDLDIDALVRILSQPKNAL 332
>gi|290969193|ref|ZP_06560718.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
genomosp. type_1 str. 28L]
gi|335049524|ref|ZP_08542514.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
sp. UPII 199-6]
gi|290780699|gb|EFD93302.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
genomosp. type_1 str. 28L]
gi|333762784|gb|EGL40269.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
sp. UPII 199-6]
Length = 410
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 164/292 (56%), Positives = 218/292 (74%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP EI LD++VIGQE AKK L+VAVYNHYKR L+ + A
Sbjct: 57 ETLPTPHEIKATLDEYVIGQEAAKKTLAVAVYNHYKR-----LQSNTDA----------- 100
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL+KSNV+++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+ L KL
Sbjct: 101 DDVELQKSNVVMVGPTGSGKTLLAQTLARLLNVPFAIADATSLTEAGYVGEDVENCLLKL 160
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
+ A++++E AQ+G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK+LEGT+ VP +
Sbjct: 161 IQAADYDIEKAQRGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKILEGTVAGVPPQ 220
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D +Q+DT +ILFICGGAF ++KTI +R D +GFGA V++ + +
Sbjct: 221 GGRKHPHQDMLQIDTTNILFICGGAFDGIDKTIQKRISDKKMGFGADVQSKSKKAL---- 276
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+LL+ + DL +GLIPE +GR P+LV+L L E+ +V +LTEPKNAL
Sbjct: 277 --KTLLKDIIPVDLQKFGLIPELIGRLPVLVTLDPLDEEAMVHILTEPKNAL 326
>gi|187776851|ref|ZP_02993324.1| hypothetical protein CLOSPO_00390 [Clostridium sporogenes ATCC
15579]
gi|187775510|gb|EDU39312.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
sporogenes ATCC 15579]
Length = 429
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 215/290 (74%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQE AKK LSVAVYNHYKRI N+D+
Sbjct: 60 LPKPTEIKTYLDQYVIGQEDAKKSLSVAVYNHYKRINSNT----------------NNDD 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELQKSNILLLGPTGSGKTLLAQTLAKFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ VP +G
Sbjct: 164 NADYDIERAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVAAVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I R + SS+GFGA +++ +
Sbjct: 224 RKHPHQEFIQINTTNILFICGGAFDGVDKIIERRTRTSSLGFGAEIQSKKEKDL------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL+ + DL+ +GLIPEF+GR PI+V+L L + L+K+LTEPKNAL
Sbjct: 278 GKLLKDIMPGDLLKFGLIPEFIGRLPIVVTLDKLDREALIKILTEPKNAL 327
>gi|123443341|ref|YP_001007315.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|420257506|ref|ZP_14760263.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. enterocolitica WA-314]
gi|6225174|sp|O33873.1|CLPX_YEREN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166215219|sp|A1JNN1.1|CLPX_YERE8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|2580495|gb|AAC45783.1| ClpX [Yersinia enterocolitica]
gi|122090302|emb|CAL13168.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|404515020|gb|EKA28798.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. enterocolitica WA-314]
Length = 423
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 217/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + LD +VIGQE AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRRHLDDYVIGQEPAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGFGA V+ G ++ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRINTGSGIGFGATVK-----GKSEKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL E DLI +GLIPEF+GR P++ +L+ L+ED L+++L EPKNAL
Sbjct: 283 EGELLRQAEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNAL 333
>gi|167769422|ref|ZP_02441475.1| hypothetical protein ANACOL_00752 [Anaerotruncus colihominis DSM
17241]
gi|167668390|gb|EDS12520.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Anaerotruncus
colihominis DSM 17241]
Length = 465
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 165/287 (57%), Positives = 215/287 (74%), Gaps = 25/287 (8%)
Query: 264 PKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVEL 323
P EI + LD++VIGQE+AK LSVAVYNHYKRIY ++ +VEL
Sbjct: 98 PHEIKEKLDEYVIGQERAKIALSVAVYNHYKRIYFGDV-----------------GDVEL 140
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
K+NVLL+GPTG GKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL +LL A+
Sbjct: 141 SKTNVLLLGPTGVGKTLLAQTLARMLNVPFAIADATTLTEAGYVGEDVENILLRLLQAAD 200
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKH 443
++VE AQ+G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +G RKH
Sbjct: 201 YDVERAQKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKILEGTVANVPPQGGRKH 260
Query: 444 PRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSL 503
P+ + IQ+DTKDILFICGGAF ++K I R SS+GF + ++ N++A L
Sbjct: 261 PQQEFIQIDTKDILFICGGAFEGIDKIIERRTDKSSLGFSSTLK-NVKA-------RDRL 312
Query: 504 LESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++ V DL+ +GLIPE VGR P+L +L AL D LV++LTEPKN+L
Sbjct: 313 VQQVIPQDLVKFGLIPELVGRTPVLTALEALDRDALVRILTEPKNSL 359
>gi|148977889|ref|ZP_01814442.1| ATP-dependent protease ATP-binding subunit [Vibrionales bacterium
SWAT-3]
gi|145962835|gb|EDK28107.1| ATP-dependent protease ATP-binding subunit [Vibrionales bacterium
SWAT-3]
Length = 426
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 218/293 (74%), Gaps = 21/293 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP+EI + LD +VIGQE AKKVL+VAVYNHYKR+ + + T A
Sbjct: 63 ESLPTPREIREHLDDYVIGQEYAKKVLAVAVYNHYKRLRNGD----------TTA----- 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 EGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + S IGFGA VR+ +
Sbjct: 228 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVETGSGIGFGAEVRSK-----DET 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE DL+ YGLIPEF+GR P+ +LT L E+ L+++L EPKNAL
Sbjct: 283 KTIGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNAL 335
>gi|154706445|ref|YP_001424147.1| ATP-dependent protease ATP-binding subunit ClpX [Coxiella burnetii
Dugway 5J108-111]
gi|189082494|sp|A9KDS7.1|CLPX_COXBN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|154355731|gb|ABS77193.1| ATP-dependent endopeptidase clp ATP-binding subunit [Coxiella
burnetii Dugway 5J108-111]
Length = 422
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 168/301 (55%), Positives = 220/301 (73%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ GG+ + LPTP EI + LD++VIGQE AKKVLSVAVYNHYKR+ + K
Sbjct: 51 AQAGGAQ--KKLPTPPEIHRMLDEYVIGQEFAKKVLSVAVYNHYKRLGNQTKK------- 101
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D+VE+ KSN+LL+GPTGSGKTLLA+TLA+ ++VPF IADATTLT+AGYVGE
Sbjct: 102 ---------DSVEISKSNILLIGPTGSGKTLLAQTLAKILDVPFAIADATTLTEAGYVGE 152
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL + ++VE A+ G++YIDE+DKI +K +S +++RDVSGEGVQQALLK++E
Sbjct: 153 DVENIIQKLLQKCNYDVEKAKTGIIYIDEIDKIARKTDSPSLTRDVSGEGVQQALLKLIE 212
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ ++P +G RKHP+ + +Q+DT +ILFICGGAF DL K I R IGF A VR
Sbjct: 213 GTVASIPPQGGRKHPQQEYLQVDTSNILFICGGAFADLHKIIQRRTDKIGIGFAAEVRP- 271
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
+ + A S L++ E DLI YGLIPEFVGR PI+ +L L ED L+++LTEPKNA
Sbjct: 272 -KEDFSREA--SKLIKQTEPGDLIKYGLIPEFVGRLPIITTLEELDEDALMRILTEPKNA 328
Query: 550 L 550
L
Sbjct: 329 L 329
>gi|183601062|ref|ZP_02962555.1| hypothetical protein PROSTU_04685 [Providencia stuartii ATCC 25827]
gi|386742737|ref|YP_006215916.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
stuartii MRSN 2154]
gi|188019402|gb|EDU57442.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Providencia
stuartii ATCC 25827]
gi|384479430|gb|AFH93225.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
stuartii MRSN 2154]
Length = 425
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 166/291 (57%), Positives = 219/291 (75%), Gaps = 21/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + LD +VIGQE+AKKVLSVAVYNHYKR+ + + T A +
Sbjct: 64 LPTPHEIREHLDDYVIGQEQAKKVLSVAVYNHYKRLRNGD----------TTA-----EG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGF A V+ G +D
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTRSGIGFAAEVK-----GESDKIS 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL E DLI +GLIPEF+GR P++ +LT L+E+ L+++L EPKNAL
Sbjct: 284 EGELLTQTEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILQEPKNAL 334
>gi|418961252|ref|ZP_13513139.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
salivarius SMXD51]
gi|380344919|gb|EIA33265.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
salivarius SMXD51]
Length = 408
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 162/291 (55%), Positives = 214/291 (73%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++PTP EI L+++V+GQE+AKK L+VAVYNHYKR+ A++ +DD
Sbjct: 60 NVPTPHEIVDTLNQYVVGQEEAKKTLAVAVYNHYKRV---------------NASLSDDD 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
EL+KSN+ L+GPTGSGKT LA+ LAR +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 105 GTELQKSNICLVGPTGSGKTFLAQNLARILNVPFAIADATTLTEAGYVGEDVENILLKLL 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE AQ+G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 165 QNADYDVERAQRGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ++T +ILFI GGAF +E + R D +IGFG +
Sbjct: 225 GRKHPQQEFIQINTTNILFIVGGAFDGIETMVKNRLGDKTIGFGVDSKQEYDPD------ 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL++ + DL+ +GLIPEF+GR PIL +L LTE+ LV++LTEPKNAL
Sbjct: 279 -KSLMQQIIPEDLLKFGLIPEFIGRLPILTALEKLTEEDLVRILTEPKNAL 328
>gi|261752414|ref|ZP_05996123.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella suis
bv. 5 str. 513]
gi|261742167|gb|EEY30093.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella suis
bv. 5 str. 513]
Length = 424
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 161/292 (55%), Positives = 219/292 (75%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF++ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFIMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL
Sbjct: 281 RIGEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNAL 332
>gi|328543682|ref|YP_004303791.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Polymorphum
gilvum SL003B-26A1]
gi|326413426|gb|ADZ70489.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Polymorphum
gilvum SL003B-26A1]
Length = 421
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 218/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ AKKVLSVAV+NHYKR+ HA+ +++
Sbjct: 63 IPTPQEIRHVLDDYVIGQNSAKKVLSVAVHNHYKRLNHAS----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGF A V G D +
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISDRGRKTSIGFKANV-----VGPEDRRI- 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L +E DL+ +GLIPEFVGR P++ +L L E+ LV +LTEPKNAL
Sbjct: 281 GELFSELEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALVTILTEPKNAL 330
>gi|297250255|ref|ZP_06863929.2| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
polysaccharea ATCC 43768]
gi|296839417|gb|EFH23355.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
polysaccharea ATCC 43768]
Length = 394
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 212/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK N
Sbjct: 44 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKVGG------N 87
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 88 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 147
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 148 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 207
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 208 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 262
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL
Sbjct: 263 TKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNAL 312
>gi|260549097|ref|ZP_05823318.1| ATP-dependent protease Clp [Acinetobacter sp. RUH2624]
gi|260407825|gb|EEX01297.1| ATP-dependent protease Clp [Acinetobacter sp. RUH2624]
Length = 437
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 220/291 (75%), Gaps = 20/291 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG-SGAEPKTAAAVDNDD 319
LP P EI L+++VIGQ+ AKK LSVAVYNHYKR LK G SG K
Sbjct: 60 LPKPHEIRAALNQYVIGQDLAKKTLSVAVYNHYKR-----LKVGQSGHVSK--------- 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 166 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ ++
Sbjct: 226 GRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKKK-----DESKK 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L VE +DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL
Sbjct: 281 IAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNAL 331
>gi|17987158|ref|NP_539792.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella
melitensis bv. 1 str. 16M]
gi|62290023|ref|YP_221816.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella abortus
bv. 1 str. 9-941]
gi|82699950|ref|YP_414524.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella
melitensis biovar Abortus 2308]
gi|225852609|ref|YP_002732842.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella
melitensis ATCC 23457]
gi|237815532|ref|ZP_04594529.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
abortus str. 2308 A]
gi|256263898|ref|ZP_05466430.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
melitensis bv. 2 str. 63/9]
gi|260565632|ref|ZP_05836116.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
melitensis bv. 1 str. 16M]
gi|260754851|ref|ZP_05867199.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
abortus bv. 6 str. 870]
gi|260758068|ref|ZP_05870416.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
abortus bv. 4 str. 292]
gi|260761892|ref|ZP_05874235.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
abortus bv. 2 str. 86/8/59]
gi|260883863|ref|ZP_05895477.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
abortus bv. 9 str. C68]
gi|261214102|ref|ZP_05928383.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
abortus bv. 3 str. Tulya]
gi|261325199|ref|ZP_05964396.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
neotomae 5K33]
gi|265991189|ref|ZP_06103746.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
melitensis bv. 1 str. Rev.1]
gi|297248423|ref|ZP_06932141.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
abortus bv. 5 str. B3196]
gi|376273161|ref|YP_005151739.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus A13334]
gi|384211473|ref|YP_005600555.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
melitensis M5-90]
gi|384408581|ref|YP_005597202.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella
melitensis M28]
gi|384445167|ref|YP_005603886.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
melitensis NI]
gi|423166788|ref|ZP_17153491.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI435a]
gi|423170838|ref|ZP_17157513.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI474]
gi|423173080|ref|ZP_17159751.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI486]
gi|423178227|ref|ZP_17164871.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI488]
gi|423180268|ref|ZP_17166909.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI010]
gi|423183400|ref|ZP_17170037.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI016]
gi|423185660|ref|ZP_17172274.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI021]
gi|423188796|ref|ZP_17175406.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI259]
gi|21263465|sp|Q8YHC7.1|CLPX_BRUME RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|68067919|sp|Q9L7X5.2|CLPX_BRUAB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123727373|sp|Q2YPX2.1|CLPX_BRUA2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763837|sp|C0RJ80.1|CLPX_BRUMB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|17982824|gb|AAL52056.1| ATP-dependent clp protease ATP-binding subunit clpx [Brucella
melitensis bv. 1 str. 16M]
gi|62196155|gb|AAX74455.1| ClpX, ATP-dependent Clp protease, ATP-binding subunit ClpX
[Brucella abortus bv. 1 str. 9-941]
gi|82616051|emb|CAJ11087.1| CbxX/CfqX superfamily:ATP/GTP-binding site motif A
(P-loop):Bacterial chromosomal replication initiator
protein, DnaA:AAA ATP [Brucella melitensis biovar
Abortus 2308]
gi|225640974|gb|ACO00888.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
melitensis ATCC 23457]
gi|237788830|gb|EEP63041.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
abortus str. 2308 A]
gi|260151700|gb|EEW86794.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
melitensis bv. 1 str. 16M]
gi|260668386|gb|EEX55326.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
abortus bv. 4 str. 292]
gi|260672324|gb|EEX59145.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
abortus bv. 2 str. 86/8/59]
gi|260674959|gb|EEX61780.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
abortus bv. 6 str. 870]
gi|260873391|gb|EEX80460.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
abortus bv. 9 str. C68]
gi|260915709|gb|EEX82570.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
abortus bv. 3 str. Tulya]
gi|261301179|gb|EEY04676.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
neotomae 5K33]
gi|263001973|gb|EEZ14548.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
melitensis bv. 1 str. Rev.1]
gi|263094030|gb|EEZ17964.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
melitensis bv. 2 str. 63/9]
gi|297175592|gb|EFH34939.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
abortus bv. 5 str. B3196]
gi|326409128|gb|ADZ66193.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella
melitensis M28]
gi|326538836|gb|ADZ87051.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
melitensis M5-90]
gi|349743158|gb|AEQ08701.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
melitensis NI]
gi|363400767|gb|AEW17737.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
abortus A13334]
gi|374539416|gb|EHR10920.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI474]
gi|374543019|gb|EHR14503.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI435a]
gi|374543635|gb|EHR15117.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI486]
gi|374545466|gb|EHR16927.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI488]
gi|374548832|gb|EHR20279.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI010]
gi|374549463|gb|EHR20906.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI016]
gi|374558454|gb|EHR29847.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI259]
gi|374559751|gb|EHR31136.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI021]
Length = 424
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 161/292 (55%), Positives = 219/292 (75%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF++ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFIMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL
Sbjct: 281 RIGEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNAL 332
>gi|384227895|ref|YP_005619640.1| ATP-dependent protease ATP-binding subunit ClpX [Buchnera
aphidicola str. Ak (Acyrthosiphon kondoi)]
gi|345538835|gb|AEO08812.1| ATP-dependent protease ATP-binding subunit ClpX [Buchnera
aphidicola str. Ak (Acyrthosiphon kondoi)]
Length = 428
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 165/291 (56%), Positives = 219/291 (75%), Gaps = 21/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+EI K LD +VIGQ+ KKVLSVAVYNHYKR+Y+ N N D
Sbjct: 67 LPTPREIKKHLDNYVIGQDHTKKVLSVAVYNHYKRLYNFN---------------KNTDL 111
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLA+ ++VPF IADATTLT+AGYVGEDVE+++ KLL
Sbjct: 112 VELGKSNILLIGPTGSGKTLLAQTLAKLLDVPFTIADATTLTEAGYVGEDVENVIQKLLQ 171
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ ++NV+ A+ G+VYIDE+DKI +K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 172 KCKYNVKKAELGIVYIDEIDKIARKSDNPSITRDVSGEGVQQALLKLIEGTLASVPPQGG 231
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q++T +ILFIC GAF +L K IS+R + IGF A V+ N + +++
Sbjct: 232 RKHPQQEFLQVNTSNILFICAGAFSELSKIISKRLDTGTEIGFNADVKGN-KQKISE--- 287
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ LL+ VE DLI +GLIPEF+GR PI+ L LTED LV +L +PKNAL
Sbjct: 288 -NVLLKQVEPEDLIKFGLIPEFIGRLPIITILKKLTEDALVNILCKPKNAL 337
>gi|345870490|ref|ZP_08822442.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thiorhodococcus drewsii AZ1]
gi|343921693|gb|EGV32406.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thiorhodococcus drewsii AZ1]
Length = 424
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 216/290 (74%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI LD+FVIGQEKAKKVLSVAVYNHYKR+ A K ++
Sbjct: 65 LPKPREINARLDEFVIGQEKAKKVLSVAVYNHYKRLEVAEAK----------------ED 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IEIAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVDKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFI GGAF L+K I R + + IGF A V + V+D
Sbjct: 229 RKHPQQEFLQVDTSNILFIVGGAFAGLDKVIQNRSRKTGIGFSAEVHS-----VSDGRQI 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL +VE DLI YGLIPEFVGR P++ +L L E L+ +LTEPK+A+
Sbjct: 284 GELLSAVEPEDLIRYGLIPEFVGRLPVMATLEELDEAALMLILTEPKHAM 333
>gi|225627582|ref|ZP_03785619.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella ceti
str. Cudo]
gi|261219455|ref|ZP_05933736.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella ceti
M13/05/1]
gi|261222275|ref|ZP_05936556.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella ceti
B1/94]
gi|261314168|ref|ZP_05953365.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
pinnipedialis M163/99/10]
gi|261317743|ref|ZP_05956940.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
pinnipedialis B2/94]
gi|261321951|ref|ZP_05961148.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella ceti
M644/93/1]
gi|261758299|ref|ZP_06002008.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella sp.
F5/99]
gi|265988774|ref|ZP_06101331.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
pinnipedialis M292/94/1]
gi|265998239|ref|ZP_06110796.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella ceti
M490/95/1]
gi|340790727|ref|YP_004756192.1| ATP-dependent protease, ATP-binding subunit ClpX [Brucella
pinnipedialis B2/94]
gi|225617587|gb|EEH14632.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella ceti
str. Cudo]
gi|260920859|gb|EEX87512.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella ceti
B1/94]
gi|260924544|gb|EEX91112.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella ceti
M13/05/1]
gi|261294641|gb|EEX98137.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella ceti
M644/93/1]
gi|261296966|gb|EEY00463.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
pinnipedialis B2/94]
gi|261303194|gb|EEY06691.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
pinnipedialis M163/99/10]
gi|261738283|gb|EEY26279.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella sp.
F5/99]
gi|262552707|gb|EEZ08697.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella ceti
M490/95/1]
gi|264660971|gb|EEZ31232.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
pinnipedialis M292/94/1]
gi|340559186|gb|AEK54424.1| ATP-dependent protease, ATP-binding subunit ClpX [Brucella
pinnipedialis B2/94]
Length = 424
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 161/292 (55%), Positives = 219/292 (75%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF++ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFIMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL
Sbjct: 281 RIGEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNAL 332
>gi|381169037|ref|ZP_09878212.1| ATP-dependent Clp protease ATP-binding subunit clpX [Phaeospirillum
molischianum DSM 120]
gi|380681826|emb|CCG43034.1| ATP-dependent Clp protease ATP-binding subunit clpX [Phaeospirillum
molischianum DSM 120]
Length = 421
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 217/290 (74%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPK+I LD +VIGQ+ AKKVLSVAV+NHYKR+ H GA+ +
Sbjct: 63 VPTPKDIRAVLDDYVIGQDHAKKVLSVAVHNHYKRLQH-------GAK---------SNE 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
AE+NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AAEYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I R + +SIGFGA VR D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIGSRGKGTSIGFGAEVRG------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DL+ +GLIPEFVGR P+L +L L L+++L++PKNAL
Sbjct: 281 GEILREVEPEDLLKFGLIPEFVGRLPVLATLEDLDVSALIEILSKPKNAL 330
>gi|295109357|emb|CBL23310.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Ruminococcus
obeum A2-162]
Length = 437
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 166/292 (56%), Positives = 215/292 (73%), Gaps = 25/292 (8%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHA-NLKKGSGAEPKTAAAVDND 318
+L P+EI K LD +VIGQ++AKK LSVAVYNHYKRI + NL
Sbjct: 64 NLLKPEEIHKILDDYVIGQDEAKKALSVAVYNHYKRITASRNL----------------- 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL+KSN+L++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL K+
Sbjct: 107 -DVELQKSNILMLGPTGSGKTLLAQTLARLLNVPFAIADATTLTEAGYVGEDVENILLKI 165
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
+ A++++E AQ G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +
Sbjct: 166 IQAADYDIERAQYGIIYIDEIDKITRKSENASITRDVSGEGVQQALLKILEGTVASVPPQ 225
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + IQ+DT +ILFICGGAF +EKTI R+ SIGFGA V +
Sbjct: 226 GGRKHPHQEFIQIDTTNILFICGGAFDGIEKTIEARQDTKSIGFGADVSVQEERNI---- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L+ V D I YGLIPEF+GR PI+V+L L E+ L+++L EPKN+L
Sbjct: 282 --GEVLKDVMPEDFIKYGLIPEFIGRVPIVVTLDGLDEEALIRILKEPKNSL 331
>gi|431927411|ref|YP_007240445.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
stutzeri RCH2]
gi|431825698|gb|AGA86815.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
stutzeri RCH2]
Length = 426
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 213/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKK+L+VAVYNHYKR+ D +
Sbjct: 65 LPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRLNQR----------------DKKEE 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ A
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFAGLEKVIQGRSTQGGIGFNAEVRSKDPGKKIGEA-- 286
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L +VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL
Sbjct: 287 ---LRAVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALIQILTEPKNAL 333
>gi|332160750|ref|YP_004297327.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|386309497|ref|YP_006005553.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. palearctica Y11]
gi|418242376|ref|ZP_12868888.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|433550573|ref|ZP_20506617.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
enterocolitica IP 10393]
gi|318604629|emb|CBY26127.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325664980|gb|ADZ41624.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330859949|emb|CBX70278.1| ATP-dependent Clp protease ATP-binding subunit clpX [Yersinia
enterocolitica W22703]
gi|351778210|gb|EHB20377.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|431789708|emb|CCO69657.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
enterocolitica IP 10393]
Length = 423
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 164/291 (56%), Positives = 217/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + LD +VIGQE AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRRHLDDYVIGQEPAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGFGA V+ G ++ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRINTGSGIGFGATVK-----GKSEKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL E DLI +GLIPEF+GR P++ +L+ L+ED L+++L EPKNAL
Sbjct: 283 EGELLSQAEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNAL 333
>gi|86148884|ref|ZP_01067135.1| ATP-dependent protease ATP-binding subunit [Vibrio sp. MED222]
gi|218710173|ref|YP_002417794.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio splendidus
LGP32]
gi|254763873|sp|B7VHZ9.1|CLPX_VIBSL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|85833327|gb|EAQ51534.1| ATP-dependent protease ATP-binding subunit [Vibrio sp. MED222]
gi|218323192|emb|CAV19369.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio
splendidus LGP32]
Length = 426
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 218/293 (74%), Gaps = 21/293 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP+EI + LD +VIGQE AKKVL+VAVYNHYKR+ + + T A
Sbjct: 63 ESLPTPREIREHLDDYVIGQEYAKKVLAVAVYNHYKRLRNGD----------TTA----- 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 EGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + S IGFGA VR+ +
Sbjct: 228 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVETGSGIGFGAEVRSK-----DET 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L VE DL+ YGLIPEF+GR P+ +LT L E+ L+++L EPKNAL
Sbjct: 283 KTIGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNAL 335
>gi|392977876|ref|YP_006476464.1| ATP-dependent protease ATP-binding subunit ClpX [Enterobacter
cloacae subsp. dissolvens SDM]
gi|392323809|gb|AFM58762.1| ATP-dependent protease ATP-binding subunit ClpX [Enterobacter
cloacae subsp. dissolvens SDM]
Length = 424
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A ++ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SEKAN 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|296101560|ref|YP_003611706.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295056019|gb|ADF60757.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 424
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A ++ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SEKAN 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNAL 333
>gi|90419400|ref|ZP_01227310.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Aurantimonas
manganoxydans SI85-9A1]
gi|90336337|gb|EAS50078.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Aurantimonas
manganoxydans SI85-9A1]
Length = 422
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 171/292 (58%), Positives = 218/292 (74%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ AKKVLSVAV+NHYKR+ HA A ND
Sbjct: 61 EGVPTPQEIIAVLDDYVIGQSFAKKVLSVAVHNHYKRLAHA--------------AKSND 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 --VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKL 164
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 165 LQSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 224
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGF A V AG D
Sbjct: 225 GGRKHPQQEFLQVDTANILFICGGAFAGLDKIISDRGRKTSIGFAANV-----AGPDDRR 279
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
T + VE DL+ +GLIPEFVGR P+L +L L E LV++L EPKNAL
Sbjct: 280 -TGDVFRQVEPEDLLKFGLIPEFVGRLPVLATLEDLDEAALVQILEEPKNAL 330
>gi|206602655|gb|EDZ39136.1| ClpX, ATPase regulatory subunit [Leptospirillum sp. Group II '5-way
CG']
Length = 426
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 164/290 (56%), Positives = 213/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
L P EI + LD++V+GQEKAK+VLSVAVYNHYKRI + D+
Sbjct: 64 LLKPAEINRILDQYVVGQEKAKRVLSVAVYNHYKRINANQIS----------------DD 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+K N+L++GPTG+GKTLLA+TLAR + VPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELQKGNILMIGPTGTGKTLLAQTLARILEVPFAIADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE A++G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ NVP +G
Sbjct: 168 AADYDVEKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLVEGTVANVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF+ L+ IS+R ++GFGA +R D T
Sbjct: 228 RKHPHQEFIQVDTSNILFICGGAFIGLDNIISQRLSSKNLGFGAEIRTP-----EDRKRT 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL +V DL+ YGLIPEFVGRFP++ L L E ++LTEPKNAL
Sbjct: 283 GELLANVRPDDLLKYGLIPEFVGRFPVMAVLDDLDEAAFYRILTEPKNAL 332
>gi|410479151|ref|YP_006766788.1| ATP-dependent protease Clp, ATPase [Leptospirillum ferriphilum
ML-04]
gi|424867690|ref|ZP_18291470.1| ClpX, ATPase regulatory subunit [Leptospirillum sp. Group II 'C75']
gi|124514480|gb|EAY55993.1| ATP-dependent Clp protease, ATP-binding subunit [Leptospirillum
rubarum]
gi|387221744|gb|EIJ76257.1| ClpX, ATPase regulatory subunit [Leptospirillum sp. Group II 'C75']
gi|406774403|gb|AFS53828.1| ATP-dependent protease Clp, ATPase subunit [Leptospirillum
ferriphilum ML-04]
Length = 426
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 166/290 (57%), Positives = 215/290 (74%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
L P EI + LD++V+GQEKAK+VLSVAVYNHYKRI +AN D+
Sbjct: 64 LLKPAEINRILDQYVVGQEKAKRVLSVAVYNHYKRI-NAN---------------QISDD 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+K N+L++GPTG+GKTLLA+TLAR + VPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELQKGNILMIGPTGTGKTLLAQTLARILEVPFAIADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE A++G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ NVP +G
Sbjct: 168 AADYDVEKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLVEGTVANVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF+ L+ IS+R ++GFGA +R D T
Sbjct: 228 RKHPHQEFIQVDTSNILFICGGAFIGLDNIISQRLSSKNLGFGAEIRTP-----EDRKRT 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL +V DL+ YGLIPEFVGRFP++ L L E ++LTEPKNAL
Sbjct: 283 GELLANVRPDDLLKYGLIPEFVGRFPVMAVLDDLDEAAFYRILTEPKNAL 332
>gi|392421145|ref|YP_006457749.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri CCUG 29243]
gi|390983333|gb|AFM33326.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri CCUG 29243]
Length = 426
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 213/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKK+L+VAVYNHYKR+ D +
Sbjct: 65 LPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRLNQR----------------DKKEE 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ A
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFAGLEKVIQGRSTQGGIGFNAEVRSKDPGKKIGEA-- 286
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L +VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL
Sbjct: 287 ---LRAVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALIQILTEPKNAL 333
>gi|452747928|ref|ZP_21947717.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri NF13]
gi|452008077|gb|EME00321.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
stutzeri NF13]
Length = 426
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 213/290 (73%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKK+L+VAVYNHYKR+ D +
Sbjct: 65 LPAPKEISGILDQYVIGQERAKKILAVAVYNHYKRLNQR----------------DKKEE 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ A
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFAGLEKVIQGRSTQGGIGFNAEVRSKDPGKKIGEA-- 286
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L +VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL
Sbjct: 287 ---LRAVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALIQILTEPKNAL 333
>gi|146310566|ref|YP_001175640.1| ATP-dependent protease ATP-binding subunit ClpX [Enterobacter sp.
638]
gi|167009015|sp|A4W7A9.1|CLPX_ENT38 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|145317442|gb|ABP59589.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Enterobacter
sp. 638]
Length = 424
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 168/291 (57%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEPAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A ++ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SEKAN 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DLI +GLIPEF+GR P++ +L L+ED L+++L EPKNAL
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEDALIQILKEPKNAL 333
>gi|23501986|ref|NP_698113.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella suis
1330]
gi|163843377|ref|YP_001627781.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella suis ATCC
23445]
gi|376280780|ref|YP_005154786.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella suis
VBI22]
gi|384224774|ref|YP_005615938.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella suis
1330]
gi|38257637|sp|Q8G0I5.1|CLPX_BRUSU RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|189082486|sp|B0CGR0.1|CLPX_BRUSI RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|23347936|gb|AAN30028.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella suis
1330]
gi|163674100|gb|ABY38211.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella suis
ATCC 23445]
gi|343382954|gb|AEM18446.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella suis
1330]
gi|358258379|gb|AEU06114.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella suis
VBI22]
Length = 424
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 161/292 (55%), Positives = 219/292 (75%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF++ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFIMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL
Sbjct: 281 RIGEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNAL 332
>gi|67458611|ref|YP_246235.1| ATP-dependent protease ATP-binding subunit ClpX [Rickettsia felis
URRWXCal2]
gi|75536923|sp|Q4UMY8.1|CLPX_RICFE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|67004144|gb|AAY61070.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rickettsia
felis URRWXCal2]
Length = 425
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 159/301 (52%), Positives = 222/301 (73%), Gaps = 21/301 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
S+ + +PTP++IC L+ +V+GQ++AKK+L+VAVYNHYKR+ + SG
Sbjct: 49 SKVALKQITSSIPTPQKICAILNDYVVGQDQAKKILAVAVYNHYKRLEYVQ----SG--- 101
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+++VEL KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADAT+LT+AGYVGE
Sbjct: 102 --------NNDVELNKSNILLIGPTGSGKTLLAQTLAKILDVPFTMADATSLTEAGYVGE 153
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+IL +LL AEFN+ AQ+G++YIDEVDKI +K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 154 DVENILLRLLIAAEFNIAKAQKGIIYIDEVDKIARKSENPSITRDVSGEGVQQALLKIME 213
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ D +Q+DT +ILFICGGAF+ ++ I+ R SSIGF A V +
Sbjct: 214 GTVASVPPQGGRKHPQQDFVQLDTSNILFICGGAFMGIDSIITARTNHSSIGFAANVNID 273
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
S +L+S+E DL +GLIPEF+GR PI+ +L L +D L+ +LT+PKNA
Sbjct: 274 KEKN------NSEILKSLEIEDLTKFGLIPEFIGRLPIVTTLDELDKDALITILTKPKNA 327
Query: 550 L 550
+
Sbjct: 328 I 328
>gi|260566356|ref|ZP_05836826.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella suis
bv. 4 str. 40]
gi|260155874|gb|EEW90954.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella suis
bv. 4 str. 40]
Length = 424
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 161/292 (55%), Positives = 219/292 (75%), Gaps = 22/292 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF++ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFIMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL
Sbjct: 281 RIGEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNAL 332
>gi|168186117|ref|ZP_02620752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum C str. Eklund]
gi|169296071|gb|EDS78204.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum C str. Eklund]
Length = 431
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 167/290 (57%), Positives = 216/290 (74%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD +VIGQ+ AKK L+VAVYNHYKRI + VD DD
Sbjct: 60 LPKPSEIKNYLDDYVIGQDSAKKALAVAVYNHYKRI---------------NSDVDVDD- 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELQKSNILLLGPTGSGKTLLAQTLARLLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 NADYDIEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF L+K I +R + SS+GFG+ V++ D
Sbjct: 224 RKHPHQEFIQINTSNILFICGGAFDGLDKIIEKRTRKSSLGFGSDVQSK------DEKDI 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL+ DL+ +GLIPEF+GR PI+V+L +L D LVK+L EPKNAL
Sbjct: 278 GELLKESVPEDLLKFGLIPEFIGRLPIMVTLQSLDNDALVKILKEPKNAL 327
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,566,393,238
Number of Sequences: 23463169
Number of extensions: 480187269
Number of successful extensions: 6703515
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 23666
Number of HSP's successfully gapped in prelim test: 26811
Number of HSP's that attempted gapping in prelim test: 4700301
Number of HSP's gapped (non-prelim): 1032911
length of query: 556
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 408
effective length of database: 8,886,646,355
effective search space: 3625751712840
effective search space used: 3625751712840
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)