BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008723
(556 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A1W5B7|CLPX_ACISJ ATP-dependent Clp protease ATP-binding subunit ClpX OS=Acidovorax
sp. (strain JS42) GN=clpX PE=3 SV=1
Length = 421
Score = 343 bits (880), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 171/291 (58%), Positives = 220/291 (75%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQEKAK+ L+VAVYNHYKR+ H + K G D
Sbjct: 64 DLPTPAEIKTNLDHYVIGQEKAKRTLAVAVYNHYKRLRHKD-KAGK-------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 EVELSKSNILLIGPTGSGKTLLAQTLARQLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA VR+ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVRSKKQRSLTE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + +E DLI +GLIPE VGR P++ +L L+ED LV++LTEPKNAL
Sbjct: 287 ---VFQDIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTEPKNAL 334
>sp|B9MG15|CLPX_ACIET ATP-dependent Clp protease ATP-binding subunit ClpX OS=Acidovorax
ebreus (strain TPSY) GN=clpX PE=3 SV=1
Length = 421
Score = 343 bits (880), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 171/291 (58%), Positives = 220/291 (75%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQEKAK+ L+VAVYNHYKR+ H + K G D
Sbjct: 64 DLPTPAEIKTNLDHYVIGQEKAKRTLAVAVYNHYKRLRHKD-KAGK-------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 EVELSKSNILLIGPTGSGKTLLAQTLARQLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA VR+ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVRSKKQRSLTE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + +E DLI +GLIPE VGR P++ +L L+ED LV++LTEPKNAL
Sbjct: 287 ---VFQDIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTEPKNAL 334
>sp|C5CJT5|CLPX_VARPS ATP-dependent Clp protease ATP-binding subunit ClpX OS=Variovorax
paradoxus (strain S110) GN=clpX PE=3 SV=1
Length = 421
Score = 342 bits (877), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 171/291 (58%), Positives = 218/291 (74%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE AK++LSVAVYNHYKR+ H KG D
Sbjct: 64 DLPTPLEIKTNLDNYVIGQEPAKRMLSVAVYNHYKRLRHKEKAKG--------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGASVKSKAQRSITE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DLI +GLIPE VGR P++ SL L+ED LV++LTEPKNA+
Sbjct: 287 ---VFREVEPEDLIKFGLIPELVGRMPVVASLAELSEDALVQILTEPKNAV 334
>sp|B7KBH7|CLPX_CYAP7 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Cyanothece
sp. (strain PCC 7424) GN=clpX PE=3 SV=1
Length = 447
Score = 340 bits (873), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 172/296 (58%), Positives = 225/296 (76%), Gaps = 16/296 (5%)
Query: 256 NLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKK-GSGAEPKTAAA 314
+LG+ +P P+EI K LD++VIGQ +AKKVLSVAVYNHYKR+ K+ G+GA
Sbjct: 76 SLGQ-IPKPREIKKYLDEYVIGQNEAKKVLSVAVYNHYKRLSDIQAKRTGTGA------- 127
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
DD VEL+KSN+LLMGPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I
Sbjct: 128 --TDDPVELQKSNILLMGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENI 185
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
L +LL A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ N
Sbjct: 186 LLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVAN 245
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP D IQ+DT +ILFICGGAFV L+K + +R S+GF P G
Sbjct: 246 VPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLDKIVEQRLGKKSMGFIRPAE-----GT 300
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ ++ LL+ +E DL+ +G+IPEFVGR P++ SL L ED L+ +LT+P+NAL
Sbjct: 301 SKEKWSADLLKQLEPDDLVKFGMIPEFVGRIPVMASLDPLDEDALIAILTQPRNAL 356
>sp|B1Y6H2|CLPX_LEPCP ATP-dependent Clp protease ATP-binding subunit ClpX OS=Leptothrix
cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=clpX
PE=3 SV=1
Length = 424
Score = 340 bits (872), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 175/298 (58%), Positives = 218/298 (73%), Gaps = 19/298 (6%)
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
GG DLP P EI LD++VIGQ+ AK+ LSVAVYNHYKR+ H KG G E
Sbjct: 58 GGKTSRSDLPVPSEIKTLLDQYVIGQDAAKRTLSVAVYNHYKRLKHMA-DKGKGEE---- 112
Query: 313 AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVE 372
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE
Sbjct: 113 --------VELAKSNILLIGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVE 164
Query: 373 SILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI 432
+I+ KLL + VE AQ+G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 165 NIIQKLLQNCNYEVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLVEGTM 224
Query: 433 VNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA 492
+VP +G RKHP D +Q+DT +ILFICGGAF LEK I+ R + S IGFGA V++
Sbjct: 225 ASVPPQGGRKHPNQDFLQIDTTNILFICGGAFDGLEKVIANRSEKSGIGFGATVKSKAER 284
Query: 493 GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
V S + +E DLI +G+IPE VGR P++ +L LTED LV++LTEPKNAL
Sbjct: 285 SV------SEVFRQIEPEDLIKFGIIPELVGRLPVIATLGELTEDALVQILTEPKNAL 336
>sp|Q5LUP9|CLPX_RUEPO ATP-dependent Clp protease ATP-binding subunit ClpX OS=Ruegeria
pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
GN=clpX PE=3 SV=1
Length = 424
Score = 340 bits (872), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/290 (58%), Positives = 222/290 (76%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++IC LD +VIGQ AK+VLSVAV+NHYKR+ HA K GS +
Sbjct: 65 VPTPRDICDVLDDYVIGQSTAKRVLSVAVHNHYKRLNHAQ-KAGS--------------D 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VRA+ GV
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRASDERGV------ 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
L +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNAL
Sbjct: 284 GELFTELEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTKPKNAL 333
>sp|A1VRH7|CLPX_POLNA ATP-dependent Clp protease ATP-binding subunit ClpX OS=Polaromonas
naphthalenivorans (strain CJ2) GN=clpX PE=3 SV=1
Length = 421
Score = 340 bits (871), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 174/300 (58%), Positives = 220/300 (73%), Gaps = 23/300 (7%)
Query: 254 GSNLGE---DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPK 310
GS GE DLPTP EI LD +VIGQE AK+ L+VAVYNHYKR+ H K
Sbjct: 55 GSEAGEARSDLPTPAEIKATLDGYVIGQEPAKRTLAVAVYNHYKRLRHKESAK------- 107
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGED
Sbjct: 108 -------KDDVELTKSNILLIGPTGSGKTLLAQTLARTLNVPFVMADATTLTEAGYVGED 160
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VE+I+ KLL + V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EG
Sbjct: 161 VENIIQKLLQSCNYEVDRAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLMEG 220
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++
Sbjct: 221 TMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFSGLEKVIENRTEASGIGFGAAVKSKK 280
Query: 491 RAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+T+A + VE DLI +GLIPE VGR P++ +L L+ED LV++LTEPKNA+
Sbjct: 281 ARSLTEA------FKDVEPEDLIKFGLIPELVGRMPVIATLAELSEDALVQILTEPKNAV 334
>sp|Q12BY1|CLPX_POLSJ ATP-dependent Clp protease ATP-binding subunit ClpX OS=Polaromonas
sp. (strain JS666 / ATCC BAA-500) GN=clpX PE=3 SV=1
Length = 421
Score = 338 bits (867), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 171/291 (58%), Positives = 216/291 (74%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE AK+ L+VAVYNHYKR+ H K D
Sbjct: 64 DLPTPAEIKATLDGYVIGQEPAKRTLAVAVYNHYKRLRHKEKAK--------------KD 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELTKSNILLIGPTGSGKTLLAQTLARTLNVPFVMADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ +T++
Sbjct: 230 GRKHPNQDFLQVDTTNILFICGGAFSGLEKVIENRTEASGIGFGALVKSKKTRSLTES-- 287
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DLI +GLIPE VGR P++ +L LTED LV++LTEPKNA+
Sbjct: 288 ----FKEVEPEDLIKFGLIPELVGRMPVVATLAELTEDALVQILTEPKNAV 334
>sp|Q2JW64|CLPX_SYNJA ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Synechococcus sp. (strain JA-3-3Ab) GN=clpX PE=3 SV=1
Length = 448
Score = 338 bits (867), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 221/290 (76%), Gaps = 11/290 (3%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQEKAKKVLSVAVYNHYKR+ + A P + A + D+
Sbjct: 79 LPKPREIMRYLDQYVIGQEKAKKVLSVAVYNHYKRL-------AAKANPNSLGAAELDE- 130
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+IL +LL
Sbjct: 131 VELQKSNILVIGPTGSGKTLLAETLARMLDVPFAVADATTLTEAGYVGEDVENILLRLLQ 190
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +G
Sbjct: 191 VADMDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVPPQGG 250
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT +ILFICGGAFV LEK I +R S+GF ++ + VT
Sbjct: 251 RKHPYQDCIQIDTSNILFICGGAFVGLEKVIEQRIGKKSMGF---IKPGEQLAVTREQRL 307
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L+++E DLI YG+IPEF+GR P++ +L L E L +LT+PKNA+
Sbjct: 308 ADALKALEPEDLIKYGMIPEFIGRLPVVATLDPLDEKALEAILTQPKNAI 357
>sp|Q1GGF7|CLPX_RUEST ATP-dependent Clp protease ATP-binding subunit ClpX OS=Ruegeria sp.
(strain TM1040) GN=clpX PE=3 SV=1
Length = 421
Score = 338 bits (866), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 170/301 (56%), Positives = 225/301 (74%), Gaps = 21/301 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA K G
Sbjct: 52 TKASGMKATDGVPTPKDICEVLDDYVIGQATAKRVLSVAVHNHYKRLNHAQ-KAG----- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ---------NDIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I +R + S++GFGA VR
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIKQRGKGSAMGFGADVREE 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
AGV + +E DL+ +GLIPEFVGR P+L +L L ED L+ +LT+PKNA
Sbjct: 277 SDAGVGET------FRDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKPKNA 330
Query: 550 L 550
L
Sbjct: 331 L 331
>sp|A8LJA7|CLPX_DINSH ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Dinoroseobacter shibae (strain DFL 12) GN=clpX PE=3
SV=1
Length = 419
Score = 338 bits (866), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 172/301 (57%), Positives = 225/301 (74%), Gaps = 23/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +PTP+EIC LD +VIGQ AK+VLSVAV+NHYKR+ HA
Sbjct: 51 TKSSGLKSSEGVPTPQEICDVLDDYVIGQSHAKRVLSVAVHNHYKRLNHAG--------- 101
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
KT ++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 102 KT--------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 153
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 154 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 213
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S+IGFGA V+ N
Sbjct: 214 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSAIGFGADVKEN 273
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + +E DL+ +GLIPEFVGR P++ +LT L ED LV +LT+PKNA
Sbjct: 274 DTRGV------GEMFGELEPEDLLKFGLIPEFVGRLPVIATLTDLDEDALVTILTQPKNA 327
Query: 550 L 550
L
Sbjct: 328 L 328
>sp|B8EIL3|CLPX_METSB ATP-dependent Clp protease ATP-binding subunit ClpX OS=Methylocella
silvestris (strain BL2 / DSM 15510 / NCIMB 13906)
GN=clpX PE=3 SV=1
Length = 421
Score = 337 bits (865), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 221/290 (76%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ +AK+VLSVAV+NHYKR+ HA ++
Sbjct: 63 IPTPKEICKVLDDYVIGQPQAKRVLSVAVHNHYKRLNHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISTRGKGTSIGFGATVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ +GLIPEFVGR P++ +L L E+ L K+LTEPKNAL
Sbjct: 281 GEIFRKVEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALKKILTEPKNAL 330
>sp|Q21Y66|CLPX_RHOFD ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhodoferax
ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)
GN=clpX PE=3 SV=1
Length = 421
Score = 337 bits (865), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 217/291 (74%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI LD +VIGQE AK+ L+VAVYNHYKR+ H K D
Sbjct: 64 ELPTPLEIKTNLDNYVIGQEPAKRTLAVAVYNHYKRLRHQEKAKK--------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIVLKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R Q S +GFGA V++ + +T+
Sbjct: 230 GRKHPNQDFVQVDTTNILFICGGAFSGLEKVIDNRTQSSGMGFGATVKSKEQRSLTE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ + VE DLI +GLIPE VGR P+L +L L+ED LV++LTEPKNAL
Sbjct: 287 ---VFKEVEPEDLIKFGLIPELVGRMPVLATLAELSEDALVQILTEPKNAL 334
>sp|Q5NH46|CLPX_FRATT ATP-dependent Clp protease ATP-binding subunit ClpX OS=Francisella
tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
GN=clpX PE=3 SV=1
Length = 417
Score = 337 bits (864), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 178/324 (54%), Positives = 222/324 (68%), Gaps = 25/324 (7%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRDGNICNECVSKCAEKIRSTGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL+KSNVLL+GPTGSGKTL A+TLA
Sbjct: 82 VAVYNHYKRI-TSNLTK--------------DDDTELKKSNVLLIGPTGSGKTLFAQTLA 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT DILFICGGAF
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAG 246
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK I R SIGF + V + +D L++ +ES DL +GLIPE +GR P
Sbjct: 247 IEKVIKHRMDKVSIGFNSDVIQQKNSLDSD-----KLMQKIESEDLTRFGLIPELIGRLP 301
Query: 527 ILVSLTALTEDQLVKVLTEPKNAL 550
I+ L L E+ LV++LTEPKNAL
Sbjct: 302 IVTVLNELKEEDLVRILTEPKNAL 325
>sp|B0JL96|CLPX_MICAN ATP-dependent Clp protease ATP-binding subunit ClpX OS=Microcystis
aeruginosa (strain NIES-843) GN=clpX PE=3 SV=1
Length = 444
Score = 337 bits (863), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 219/292 (75%), Gaps = 12/292 (4%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K G P +
Sbjct: 74 EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKAGGGSP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 245
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P +
Sbjct: 246 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDGQ----ASKDK 301
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
V + LL+ + DL+ +G+IPEFVGR PIL +L+ L E+ L+ +LT+P+NAL
Sbjct: 302 VAAGLLKQMTPDDLVKFGMIPEFVGRIPILAALSPLDEEALIAILTQPRNAL 353
>sp|A1TM61|CLPX_ACIAC ATP-dependent Clp protease ATP-binding subunit ClpX OS=Acidovorax
citrulli (strain AAC00-1) GN=clpX PE=3 SV=1
Length = 421
Score = 337 bits (863), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 217/291 (74%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE AK+ L+VAVYNHYKR+ H + K G D
Sbjct: 64 DLPTPSEIKANLDNYVIGQEIAKRTLAVAVYNHYKRLRHKD-KAGK-------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 EVELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVKSKKQRSLTE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ +E DLI +GLIPE VGR P++ +L L+ED LV++LTEPKNAL
Sbjct: 287 ---VFTEIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTEPKNAL 334
>sp|B7JW74|CLPX_CYAP8 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Cyanothece
sp. (strain PCC 8801) GN=clpX PE=3 SV=1
Length = 448
Score = 337 bits (863), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 221/290 (76%), Gaps = 14/290 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P+EI K LD++VIGQ++AKKVLSVAVYNHYKR+ +L G E ++D+
Sbjct: 82 IPKPREIKKYLDEYVIGQDEAKKVLSVAVYNHYKRL---SLASKPGEET-------SEDH 131
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL+KSN+LLMGPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +LL
Sbjct: 132 IELQKSNILLMGPTGSGKTLLAQTLAQILDVPFAVADATTLTEAGYVGEDVENILLRLLQ 191
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +G
Sbjct: 192 VADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVPPQGG 251
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT +ILFICGGAFV L+K I +RR S+GF P N +
Sbjct: 252 RKHPYQDCIQIDTSNILFICGGAFVGLDKVIEQRRGKKSMGFIRPGDTNQ----SKEKRA 307
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L++ E DL+ +G+IPEFVGR P++ SL L E+ L+ +LT+P+NAL
Sbjct: 308 ADLMQQAEPDDLVKFGMIPEFVGRIPVMASLEPLDEETLIAILTQPRNAL 357
>sp|A2SFB6|CLPX_METPP ATP-dependent Clp protease ATP-binding subunit ClpX OS=Methylibium
petroleiphilum (strain PM1) GN=clpX PE=3 SV=1
Length = 423
Score = 337 bits (863), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 171/291 (58%), Positives = 214/291 (73%), Gaps = 19/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP P EI LD++VIGQE AK+ L+VAVYNHYKR+ H V +
Sbjct: 65 DLPVPGEIKASLDQYVIGQEPAKRTLAVAVYNHYKRLKHVQ-------------GVGKKE 111
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 112 DVELAKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 171
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 172 QNCNYEVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 231
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ V
Sbjct: 232 GRKHPNQDFLQIDTTNILFICGGAFDGLEKVIQNRSEKSGIGFGASVQSKTERKV----- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S + VE DLI +GLIPE VGR P++ +L LTED +V++LTEPKNAL
Sbjct: 287 -SEVFREVEPEDLIKFGLIPELVGRLPVVATLGELTEDAMVQILTEPKNAL 336
>sp|A1U1Q2|CLPX_MARAV ATP-dependent Clp protease ATP-binding subunit ClpX OS=Marinobacter
aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=clpX
PE=3 SV=1
Length = 427
Score = 337 bits (863), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 169/290 (58%), Positives = 224/290 (77%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + L+++VIGQ++AK VLSVAVYNHYKR L+ G G +
Sbjct: 67 LPTPAEIRETLNEYVIGQDRAKVVLSVAVYNHYKR-----LRYGEGKS-----------D 110
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 VELGKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 170
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 230
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER + SSIGF A V++ D+ T
Sbjct: 231 RKHPQQEFLQVDTGNILFICGGAFAGLDKVIQERSERSSIGFSATVKSQ-----DDSKST 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
++ VE+ DL+ +GLIPEFVGR P++ +LT L E+ LV++LTEPKNAL
Sbjct: 286 GDIIREVETEDLVKFGLIPEFVGRLPVVATLTELDEEALVQILTEPKNAL 335
>sp|Q165G0|CLPX_ROSDO ATP-dependent Clp protease ATP-binding subunit ClpX OS=Roseobacter
denitrificans (strain ATCC 33942 / OCh 114) GN=clpX PE=3
SV=1
Length = 421
Score = 337 bits (863), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 171/301 (56%), Positives = 224/301 (74%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC LD +VIGQ AK+VLSVAV+NHYKR+ HA +KG
Sbjct: 52 TKASGLKATDGVPTPKDICAVLDDYVIGQAMAKRVLSVAVHNHYKRLNHA--QKGG---- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I+ R + S++GFGA VR N
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAARGKGSAMGFGADVRGN 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNA
Sbjct: 276 DDRGV------GEIFTDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTQPKNA 329
Query: 550 L 550
L
Sbjct: 330 L 330
>sp|Q5X452|CLPX_LEGPA ATP-dependent Clp protease ATP-binding subunit ClpX OS=Legionella
pneumophila (strain Paris) GN=clpX PE=3 SV=1
Length = 424
Score = 336 bits (861), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 170/290 (58%), Positives = 220/290 (75%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI LD++VIGQ+ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 63 LPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS-----------------EDG 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 KCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER SSIGF A +++ + D A
Sbjct: 226 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKS--KKSSNDEA-- 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L +ES DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL
Sbjct: 282 SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNAL 331
>sp|Q11J59|CLPX_MESSB ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Mesorhizobium sp. (strain BNC1) GN=clpX PE=3 SV=1
Length = 424
Score = 336 bits (861), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/294 (59%), Positives = 223/294 (75%), Gaps = 26/294 (8%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI + LD +VIGQ AK+VLSVAV+NHYKR+ HA G A
Sbjct: 63 EGVPTPQEIMEVLDDYVIGQTYAKRVLSVAVHNHYKRLAHA----GKNA----------- 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 -DVELSKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTD 496
G RKHP+ + +Q+DT ILFICGGAF LEK IS+R + +SIGFGA V + + RAG
Sbjct: 227 GGRKHPQQEFLQVDTSSILFICGGAFAGLEKIISDRGKKTSIGFGASVSSPEDRRAG--- 283
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LL VE DL+ +GLIPEFVGR PIL +L L E+ LV++LTEPKNAL
Sbjct: 284 -----ELLRQVEPEDLLKFGLIPEFVGRLPILATLEDLDEEALVQILTEPKNAL 332
>sp|Q89KG2|CLPX_BRAJA ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Bradyrhizobium japonicum (strain USDA 110) GN=clpX
PE=3 SV=1
Length = 423
Score = 336 bits (861), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 172/292 (58%), Positives = 218/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGFGA V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFGAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LTEPKNAL
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDETSLKKILTEPKNAL 330
>sp|Q63V40|CLPX_BURPS ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
pseudomallei (strain K96243) GN=clpX PE=3 SV=2
Length = 423
Score = 336 bits (861), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>sp|A3NAI4|CLPX_BURP6 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
pseudomallei (strain 668) GN=clpX PE=3 SV=1
Length = 423
Score = 336 bits (861), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>sp|A3NWA5|CLPX_BURP0 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
pseudomallei (strain 1106a) GN=clpX PE=3 SV=1
Length = 423
Score = 336 bits (861), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>sp|A1K782|CLPX_AZOSB ATP-dependent Clp protease ATP-binding subunit ClpX OS=Azoarcus sp.
(strain BH72) GN=clpX PE=3 SV=1
Length = 422
Score = 336 bits (861), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 218/290 (75%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EIC+ LD++VIGQ +AK+ LSVAVYNHYKR+ H SG + D
Sbjct: 64 LPTPHEICQILDQYVIGQAQAKRNLSVAVYNHYKRLRHL-----SGRQ----------DE 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI ++P +G
Sbjct: 169 KCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASIPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT ++LFICGGAF L+K I R + IGFGA V++ +T+
Sbjct: 229 RKHPNQDFIQVDTTNVLFICGGAFDGLDKVIRNRTEKMGIGFGAEVKSRQGKNLTET--- 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
VE DL+ +GLIPEFVGR P++ +L L ED L+++L EPKNAL
Sbjct: 286 ---FRQVEPEDLVKFGLIPEFVGRLPVVATLQELDEDALIQILIEPKNAL 332
>sp|B2IGP2|CLPX_BEII9 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Beijerinckia
indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB
8712) GN=clpX PE=3 SV=1
Length = 421
Score = 335 bits (860), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 220/290 (75%), Gaps = 22/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ +AK+VLSVAV+NHYKR+ HA ++
Sbjct: 63 IPTPREICKVLDDYVIGQPQAKRVLSVAVHNHYKRLNHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISTRGKTTSIGFAASVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ +GLIPEFVGR P++ +L L E+ L K+LTEPKNAL
Sbjct: 281 GEIFRKVEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALKKILTEPKNAL 330
>sp|Q8XYP6|CLPX_RALSO ATP-dependent Clp protease ATP-binding subunit ClpX OS=Ralstonia
solanacearum (strain GMI1000) GN=clpX PE=3 SV=1
Length = 424
Score = 335 bits (860), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 169/301 (56%), Positives = 221/301 (73%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+ GG + DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K
Sbjct: 56 EKEGGLAVKSDLPTPHEIRQSLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK------- 108
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGE
Sbjct: 109 ---------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGE 159
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 160 DVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIE 219
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I++R S IGFGA V++
Sbjct: 220 GTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKIITQRSDKSGIGFGAEVKSK 279
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
V + +L VE DLI +GLIPE +GR P++ +L L E L+++L EPKNA
Sbjct: 280 EERDVNE------VLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMEILVEPKNA 333
Query: 550 L 550
+
Sbjct: 334 I 334
>sp|A9C1U9|CLPX_DELAS ATP-dependent Clp protease ATP-binding subunit ClpX OS=Delftia
acidovorans (strain DSM 14801 / SPH-1) GN=clpX PE=3 SV=1
Length = 420
Score = 335 bits (859), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 217/291 (74%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQ+ K+ L+VAVYNHYKR+ H + K G D
Sbjct: 63 DLPTPAEIKANLDNYVIGQDLPKRTLAVAVYNHYKRLRHKD-KAGK-------------D 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 EIELAKSNILLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
E++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QSCEYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ + +
Sbjct: 229 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGATVKSKKQRSI----- 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S + + +E DLI +G+IPE VGR P++ +L L ED LV++LTEPKNAL
Sbjct: 284 -SEVFQEIEPEDLIKFGIIPELVGRMPVVTALAELGEDALVQILTEPKNAL 333
>sp|Q5ZUE0|CLPX_LEGPH ATP-dependent Clp protease ATP-binding subunit ClpX OS=Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1 /
ATCC 33152 / DSM 7513) GN=clpX PE=3 SV=2
Length = 424
Score = 335 bits (858), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 218/290 (75%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI LD++VIGQ+ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 63 LPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS-----------------EDG 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 KCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER SSIGF A +++ +
Sbjct: 226 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSSNDE----V 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L +ES DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL
Sbjct: 282 SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNAL 331
>sp|Q47FB7|CLPX_DECAR ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Dechloromonas aromatica (strain RCB) GN=clpX PE=3
SV=1
Length = 420
Score = 335 bits (858), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 167/291 (57%), Positives = 214/291 (73%), Gaps = 20/291 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+EI LD++VIGQE AK++LSVAVYNHYKR+ H N
Sbjct: 60 DLPTPREISSILDQYVIGQEVAKRILSVAVYNHYKRLRHT---------------AKNAG 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLL 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT ++P +G
Sbjct: 165 QKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASIPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + IGFGA V++ D
Sbjct: 225 GRKHPNQDFVQVDTTNILFICGGAFAGLEKVIQSRSERGGIGFGAEVKSK-----DDGKA 279
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L E DLI +GLIPE +GR P++ +L L E LV++LTEPKNAL
Sbjct: 280 VGKILLDAEPEDLIKFGLIPELIGRLPVVATLQELEESALVQILTEPKNAL 330
>sp|B8GNT9|CLPX_THISH ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=clpX PE=3
SV=1
Length = 425
Score = 335 bits (858), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 171/297 (57%), Positives = 220/297 (74%), Gaps = 21/297 (7%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
G+ +G+ LP P EI K LD++VIGQ++AKK+L+VAVYNHYKR+ N K
Sbjct: 58 GAAVGDKLPKPHEIKKILDEYVIGQDRAKKILAVAVYNHYKRLEARNSK----------- 106
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+
Sbjct: 107 -----DEVELAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVEN 161
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
I+ KLL + +++VE AQ G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGTI
Sbjct: 162 IIQKLLQKCDYDVEKAQTGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTIA 221
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 493
+VP +G RKHP+ + +Q+DT +ILFI GGAF L+K I +R + IGF A V++ G
Sbjct: 222 SVPPQGGRKHPQQEFLQVDTHNILFIVGGAFAGLDKVIRDRTEKGGIGFSAKVKSKEEKG 281
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S L VE DLI YGLIPEFVGR P++ +L L ED L+++LTEPKNAL
Sbjct: 282 -----PVSRTLSGVEPEDLIKYGLIPEFVGRLPVVATLEELDEDALIQILTEPKNAL 333
>sp|Q5WVJ1|CLPX_LEGPL ATP-dependent Clp protease ATP-binding subunit ClpX OS=Legionella
pneumophila (strain Lens) GN=clpX PE=3 SV=1
Length = 424
Score = 335 bits (858), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 218/290 (75%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI LD++VIGQ+ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 63 LPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS-----------------EDG 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 KCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER SSIGF A +++ +
Sbjct: 226 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSSNDE----V 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L +ES DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL
Sbjct: 282 SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNAL 331
>sp|A5ID16|CLPX_LEGPC ATP-dependent Clp protease ATP-binding subunit ClpX OS=Legionella
pneumophila (strain Corby) GN=clpX PE=3 SV=1
Length = 424
Score = 335 bits (858), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 218/290 (75%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI LD++VIGQ+ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 63 LPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS-----------------EDG 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 KCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER SSIGF A +++ +
Sbjct: 226 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSSNDE----V 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L +ES DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL
Sbjct: 282 SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNAL 331
>sp|A4XTZ6|CLPX_PSEMY ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pseudomonas
mendocina (strain ymp) GN=clpX PE=3 SV=1
Length = 426
Score = 334 bits (857), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 171/290 (58%), Positives = 216/290 (74%), Gaps = 21/290 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKKVLSVAVYNHYKR+ D D+
Sbjct: 65 LPAPKEISAILDQYVIGQERAKKVLSVAVYNHYKRLNQR----------------DKKDD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ +
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFAGLEKVIQARSTKGGIGFGAEVRSKQEG----KKIG 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
SL E VE DL+ +GLIPEFVGR P++ +L L E LV++LTEPKNAL
Sbjct: 285 ESLRE-VEPDDLVKFGLIPEFVGRLPVIATLEELDEAALVQILTEPKNAL 333
>sp|Q2SWQ5|CLPX_BURTA ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
thailandensis (strain E264 / ATCC 700388 / DSM 13276 /
CIP 106301) GN=clpX PE=3 SV=1
Length = 423
Score = 334 bits (857), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 169/291 (58%), Positives = 219/291 (75%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>sp|B9KJU8|CLPX_RHOSK ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhodobacter
sphaeroides (strain KD131 / KCTC 12085) GN=clpX PE=3
SV=1
Length = 421
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 171/301 (56%), Positives = 225/301 (74%), Gaps = 23/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP+EICK LD +VIGQ AK+VLSVAV+NHYKR+ H++
Sbjct: 52 TKSTGLKSADGVPTPREICKVLDDYVIGQMHAKRVLSVAVHNHYKRLNHSS--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
KT ++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 KT--------DIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S IGFGA V+
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGAEVKD- 273
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
DA L + +E DL+ +GLIPEFVGR P++ +LT L E LV +LTEPKNA
Sbjct: 274 -----PDARGVGELFKELEPEDLLKFGLIPEFVGRLPVIATLTDLDEAALVTILTEPKNA 328
Query: 550 L 550
L
Sbjct: 329 L 329
>sp|A3PKS0|CLPX_RHOS1 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhodobacter
sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=clpX PE=3
SV=1
Length = 421
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 171/301 (56%), Positives = 225/301 (74%), Gaps = 23/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP+EICK LD +VIGQ AK+VLSVAV+NHYKR+ H++
Sbjct: 52 TKSTGLKSADGVPTPREICKVLDDYVIGQMHAKRVLSVAVHNHYKRLNHSS--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
KT ++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 KT--------DIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S IGFGA V+
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGAEVKD- 273
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
DA L + +E DL+ +GLIPEFVGR P++ +LT L E LV +LTEPKNA
Sbjct: 274 -----PDARGVGELFKELEPEDLLKFGLIPEFVGRLPVIATLTDLDEAALVTILTEPKNA 328
Query: 550 L 550
L
Sbjct: 329 L 329
>sp|B1WUD2|CLPX_CYAA5 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Cyanothece
sp. (strain ATCC 51142) GN=clpX PE=3 SV=1
Length = 435
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 168/292 (57%), Positives = 222/292 (76%), Gaps = 18/292 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LP P EI LD++VIGQ++AKKVLSVAVYNHYKR+ +L +G +++
Sbjct: 71 KELPKPMEIKDYLDEYVIGQDEAKKVLSVAVYNHYKRL---SLVQGK----------NDE 117
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
DN+EL+KSN+LLMGPTGSGKTLLA+TLA+ + VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 118 DNIELQKSNILLMGPTGSGKTLLAQTLAQVLEVPFAVADATTLTEAGYVGEDVENILLRL 177
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +
Sbjct: 178 LQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQ 237
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV LE+ I +R S+GF P G +
Sbjct: 238 GGRKHPYQDCIQIDTSNILFICGGAFVGLERVIEQRIGKKSMGFVRP-----GEGQSKEK 292
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ L++ VE DL+ +G+IPEFVGR P++ +L LTE+ LV +LT+P+NAL
Sbjct: 293 RAADLMQRVEPDDLVKFGMIPEFVGRIPVMAALNPLTEETLVAILTKPRNAL 344
>sp|A4YVM3|CLPX_BRASO ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Bradyrhizobium sp. (strain ORS278) GN=clpX PE=3 SV=1
Length = 424
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 171/292 (58%), Positives = 217/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHSD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LTEPKNAL
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNAL 330
>sp|A5EKA7|CLPX_BRASB ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
GN=clpX PE=3 SV=1
Length = 424
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 171/292 (58%), Positives = 217/292 (74%), Gaps = 26/292 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHSD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LTEPKNAL
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNAL 330
>sp|A4WSH9|CLPX_RHOS5 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhodobacter
sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=clpX PE=3
SV=1
Length = 421
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 169/301 (56%), Positives = 223/301 (74%), Gaps = 23/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP+EICK LD +VIGQ AK+VLSVAV+NHYKR+ H++
Sbjct: 52 TKSTGLKSADGVPTPREICKVLDDYVIGQMHAKRVLSVAVHNHYKRLNHSS--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 --------KNDIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S IGFGA V+
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGAEVKDP 274
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV L +E DL+ +GLIPEFVGR P++ +LT L E LV +LTEPKNA
Sbjct: 275 DSRGV------GELFTELEPEDLLKFGLIPEFVGRLPVIATLTDLDEAALVTILTEPKNA 328
Query: 550 L 550
L
Sbjct: 329 L 329
>sp|O67356|CLPX_AQUAE ATP-dependent Clp protease ATP-binding subunit ClpX OS=Aquifex
aeolicus (strain VF5) GN=clpX PE=3 SV=1
Length = 412
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 172/294 (58%), Positives = 223/294 (75%), Gaps = 24/294 (8%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+D+P P++I K LD++VIGQE+AKK+LSVAVYNHYKRI K A +
Sbjct: 57 KDIPKPEQIKKILDEYVIGQERAKKILSVAVYNHYKRI-------------KAKEAGLSL 103
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VELEKSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE++L +L
Sbjct: 104 DDVELEKSNILLIGPTGSGKTLLARTLAKILNVPFAIADATSLTEAGYVGEDVENVLVRL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLN--ISRDVSGEGVQQALLKMLEGTIVNVP 436
L +++V+AAQ+G+VYIDE+DKI KK+ +N I+RDVSGEGVQQALLK++EG++VNVP
Sbjct: 164 LQACDYDVKAAQKGIVYIDEIDKIAKKS-GINPSITRDVSGEGVQQALLKIVEGSVVNVP 222
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHP + IQ+DT DILFICGGAFV LE I +R S +GF A ++ +
Sbjct: 223 PQGGRKHPHQEFIQVDTTDILFICGGAFVGLEDIIKQRLGKSRVGFEAEIKKVDK----- 277
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
LLE VE DLI +G+IPEF+GRFP++ +L LTED+LV++L EPKNAL
Sbjct: 278 ---EQDLLELVEPDDLIRFGMIPEFIGRFPVIATLRELTEDELVRILVEPKNAL 328
>sp|A1V4X0|CLPX_BURMS ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
mallei (strain SAVP1) GN=clpX PE=3 SV=1
Length = 423
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI+ K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISCKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>sp|Q62JK8|CLPX_BURMA ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
mallei (strain ATCC 23344) GN=clpX PE=3 SV=1
Length = 423
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI+ K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISCKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>sp|A2SBG4|CLPX_BURM9 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
mallei (strain NCTC 10229) GN=clpX PE=3 SV=1
Length = 423
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI+ K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISCKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>sp|A3MKJ7|CLPX_BURM7 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Burkholderia
mallei (strain NCTC 10247) GN=clpX PE=3 SV=1
Length = 423
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI+ K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISCKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNAL 333
>sp|A1S4X6|CLPX_SHEAM ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
amazonensis (strain ATCC BAA-1098 / SB2B) GN=clpX PE=3
SV=1
Length = 425
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 171/291 (58%), Positives = 218/291 (74%), Gaps = 22/291 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQEKAKKVLSVAVYNHYKR+ +A PK D
Sbjct: 64 LPTPHELRAHLDDYVIGQEKAKKVLSVAVYNHYKRLRNAG--------PK--------DG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G +
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRTHTGSGIGFGAQVK-----GKEEKES 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
S +L VE DL+ YGLIPEF+GR P++ +L L ED L+++L+EPKNAL
Sbjct: 283 MSDILSQVEPEDLVKYGLIPEFIGRLPVVATLAELDEDALIQILSEPKNAL 333
>sp|B2UFQ3|CLPX_RALPJ ATP-dependent Clp protease ATP-binding subunit ClpX OS=Ralstonia
pickettii (strain 12J) GN=clpX PE=3 SV=1
Length = 424
Score = 333 bits (855), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 169/301 (56%), Positives = 220/301 (73%), Gaps = 22/301 (7%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+ GG + DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K
Sbjct: 56 EKEGGLAVKSDLPTPHEIRQSLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK------- 108
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGE
Sbjct: 109 ---------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGE 159
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 160 DVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVE 219
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I +R + IGFGA V++
Sbjct: 220 GTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKIIMQRSDKTGIGFGAEVQSK 279
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
V S +L VE DLI +GLIPE +GR P++ +L L E L+++L EPKNA
Sbjct: 280 EERDV------SEVLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMEILVEPKNA 333
Query: 550 L 550
+
Sbjct: 334 I 334
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 226,471,945
Number of Sequences: 539616
Number of extensions: 11414490
Number of successful extensions: 182659
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2990
Number of HSP's successfully gapped in prelim test: 1621
Number of HSP's that attempted gapping in prelim test: 95989
Number of HSP's gapped (non-prelim): 35943
length of query: 556
length of database: 191,569,459
effective HSP length: 123
effective length of query: 433
effective length of database: 125,196,691
effective search space: 54210167203
effective search space used: 54210167203
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)