BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008727
(556 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224055765|ref|XP_002298642.1| predicted protein [Populus trichocarpa]
gi|222845900|gb|EEE83447.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/552 (68%), Positives = 454/552 (82%), Gaps = 1/552 (0%)
Query: 4 RPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTH 63
R T+LA RIS+A+I+ SN + P R W PLLEQTLH++G RDSLS SLVARVI+P+LLTH
Sbjct: 3 RLGTELAVRISRALITESNSSIPTRSWNPLLEQTLHKIGCRDSLSQSLVARVIDPHLLTH 62
Query: 64 HSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
HSLALGFFNWASQQP FTH+ L+YHS+LKSLS SRQ NAI+S+LK+ K +TLDSS+YR
Sbjct: 63 HSLALGFFNWASQQPGFTHNSLTYHSVLKSLSFSRQFNAIESLLKRAKAQNLTLDSSIYR 122
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR 183
F++ SLI+ TQ AFSVFNE+K D+G E NSLLA L SDG +NA+K+FDEM++R
Sbjct: 123 FVVDSLIKRGKTQMAFSVFNEIKSQSLDLGTETSNSLLASLGSDGCFNNAMKVFDEMNNR 182
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G+ FSTIGFGVFIW+ C N LG+VL ++DEV R NS+INGSVIAVLI+HG C+G R
Sbjct: 183 GIGFSTIGFGVFIWRLCRNGDLGEVLRLVDEVEGR-NSLINGSVIAVLIVHGLCEGSRTS 241
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
EA + L+ELRIR KPDFIAYR+VAE F+ +GSVF+ VLK KRKLGVAPR+NDYREFI
Sbjct: 242 EALRALNELRIRGWKPDFIAYRVVAEAFRSLGSVFDVNEVLKMKRKLGVAPRSNDYREFI 301
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVP 363
LGLI ERRI EAKELGEVI SG F ++DDVLNALIGSVS+IDP SA+ FF+F+I KG+ P
Sbjct: 302 LGLITERRIYEAKELGEVIASGNFPMEDDVLNALIGSVSTIDPYSAMKFFHFVIGKGKFP 361
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
TL TLSNL +NLCK K DEL+EVY+VLS+N+YF+DMESYNVM SFLC GR+REAY V+
Sbjct: 362 TLLTLSNLCRNLCKHGKIDELLEVYRVLSSNEYFSDMESYNVMFSFLCMGGRVREAYEVL 421
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
QEM++KGLDPD+S YNSL+E CREDLLRPAK+LWD+MF GC GNLKTYNILI KFSE+
Sbjct: 422 QEMRKKGLDPDISMYNSLIEVLCREDLLRPAKRLWDEMFVIGCGGNLKTYNILIGKFSEI 481
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
G+IE A RLF++MLEKGV PDATT+ LLE LCQET + A +VF K VNHDVMLA++IL
Sbjct: 482 GQIEEATRLFNHMLEKGVTPDATTHRFLLEALCQETMFETAVDVFYKHVNHDVMLAQNIL 541
Query: 544 STFMISLCRRVL 555
T +++LC +V+
Sbjct: 542 KTLILNLCGKVV 553
>gi|224143615|ref|XP_002336062.1| predicted protein [Populus trichocarpa]
gi|222869847|gb|EEF06978.1| predicted protein [Populus trichocarpa]
Length = 626
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/550 (68%), Positives = 452/550 (82%), Gaps = 1/550 (0%)
Query: 4 RPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTH 63
R T+LA RIS+A+I+ SN + P R W PLLEQTLH++G RDSLS SLVARVI+P+LLTH
Sbjct: 3 RLGTELAVRISRALITESNSSIPTRSWNPLLEQTLHKIGCRDSLSQSLVARVIDPHLLTH 62
Query: 64 HSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
HSLALGFFNWASQQP FTH+ L+YHS+LKSLS SRQ NAI+S+LK+ K +TLDSS+YR
Sbjct: 63 HSLALGFFNWASQQPGFTHNSLTYHSVLKSLSFSRQFNAIESLLKRAKAQNLTLDSSIYR 122
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR 183
F++ SLI+ TQ AFSVFNE+K D+G E NSLLA L SDG +NA+K+FDEM++R
Sbjct: 123 FVVDSLIKRGKTQMAFSVFNEIKSQSLDLGTETSNSLLASLGSDGCFNNAMKVFDEMNNR 182
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G+ FSTIGFGVFIW+ C N LG+VL ++DEV R NS+INGSVIAVLI+HG C+G R
Sbjct: 183 GIGFSTIGFGVFIWRLCRNGDLGEVLRLVDEVEGR-NSLINGSVIAVLIVHGLCEGSRTS 241
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
EA + L+ELRIR KPDFIAYR+VAE F+ +GSVF+ VLK KRKLGVAPR+NDYREFI
Sbjct: 242 EALRALNELRIRGWKPDFIAYRVVAEAFRSLGSVFDVNEVLKMKRKLGVAPRSNDYREFI 301
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVP 363
LGLI ERRI EAKELGEVI SG F ++DDVLNALIGSVS+IDP SA+ FF+F+I KG+ P
Sbjct: 302 LGLITERRIYEAKELGEVIASGNFPMEDDVLNALIGSVSTIDPYSAMKFFHFVIGKGKFP 361
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
TL TLSNL +NLCK K DEL+EVY+VLS+N+YF+DMESYNVM SFLC GR+REAY V+
Sbjct: 362 TLLTLSNLCRNLCKHGKIDELLEVYRVLSSNEYFSDMESYNVMFSFLCMGGRVREAYEVL 421
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
QEM++KGLDPD+S YNSL+E CREDLLRPAK+LWD+MF GC GNLKTYNILI KFSE+
Sbjct: 422 QEMRKKGLDPDISMYNSLIEVLCREDLLRPAKRLWDEMFVIGCGGNLKTYNILIGKFSEI 481
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
G+IE A RLF++MLEKGV PDATT+ LLE LCQET + A +VF K VNHDVMLA++IL
Sbjct: 482 GQIEEATRLFNHMLEKGVTPDATTHRFLLEALCQETMFETAVDVFYKHVNHDVMLAQNIL 541
Query: 544 STFMISLCRR 553
T +++LC +
Sbjct: 542 KTLILNLCGK 551
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 8/213 (3%)
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
CK +++E +V L E D +Y ++ + G V E VL++ RK G+ P
Sbjct: 373 LCKHGKIDELLEVYRVLSSNEYFSDMESYNVMFSFLCMGGRVREAYEVLQEMRKKGLDPD 432
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFN 354
+ Y I L E + AK L + + + N LIG S I A FN
Sbjct: 433 ISMYNSLIEVLCREDLLRPAKRLWDEMFVIGCGGNLKTYNILIGKFSEIGQIEEATRLFN 492
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+EKG P +T L + LC+ + V+V+ +D ++ LC
Sbjct: 493 HMLEKGVTPDATTHRFLLEALCQETMFETAVDVFYKHVNHDVMLAQNILKTLILNLCGKA 552
Query: 415 RLREAYGVIQEMKR-KGLDPDVSFYNSLMEACC 446
E ++ K+ +G P S+++ C
Sbjct: 553 DSEEVPIAVEHAKQIRGNSP------SMLQVIC 579
>gi|255543677|ref|XP_002512901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547912|gb|EEF49404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 655
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/553 (67%), Positives = 452/553 (81%), Gaps = 3/553 (0%)
Query: 3 MRPATDLATRISQAIISASNRTRPA--RKWTPLLEQTLHQLGLRDSLSPSLVARVINPYL 60
MRPAT+LATRISQA+ISASN P R WTP LE LH++ RDSLSPSLVA+VI+P L
Sbjct: 2 MRPATELATRISQALISASNSRSPTQTRPWTPSLESVLHRIVSRDSLSPSLVAQVIDPCL 61
Query: 61 LTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS 120
LTHHSLALGFFNWASQQP FTH+ L+Y SILKSLSLSRQ NAI+ VLKQVK +TLDSS
Sbjct: 62 LTHHSLALGFFNWASQQPGFTHNSLTYDSILKSLSLSRQFNAIEYVLKQVKNQNLTLDSS 121
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
RF+I SLI+G+ TQ A+ VF+E K DIGPEICNSLLAVL SDGY D LK+FDEM
Sbjct: 122 TQRFVISSLIRGRKTQDAYLVFSEAKSRTLDIGPEICNSLLAVLGSDGYFDKGLKVFDEM 181
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
RGV F+T+GFGVFIW+FC +A L +VL++LD+V K NS+INGSVIAVL++HG C+
Sbjct: 182 LLRGVAFNTVGFGVFIWRFCRDANLSKVLNLLDQV-KEGNSVINGSVIAVLVVHGLCQAS 240
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
RV EA VL+ELRIR CKPDF+AYRIVAE F+L GS + VLK KRKLGVAPR+NDYR
Sbjct: 241 RVNEALWVLNELRIRNCKPDFMAYRIVAEAFRLSGSSADINKVLKMKRKLGVAPRSNDYR 300
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKG 360
+FIL LI +R + E KE+GEVIV G F I+ DVLNALIGSVSSIDP +A++FF+++I KG
Sbjct: 301 DFILSLIAKRLVLEVKEIGEVIVHGDFPIEVDVLNALIGSVSSIDPNTAMLFFHYIIGKG 360
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
+PTL TLSNLS+NL + K DE++EVY VLS+ DYF+D+E YNVM SFLC +G++REAY
Sbjct: 361 MLPTLLTLSNLSRNLSRHGKIDEMLEVYNVLSSKDYFSDLEGYNVMFSFLCKAGKIREAY 420
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
GV+QEMK+KGL D+S YN LMEACCREDLLRPAKKLWD+MF GC N+KTYNILI KF
Sbjct: 421 GVLQEMKKKGLGTDISMYNCLMEACCREDLLRPAKKLWDEMFVVGCGVNIKTYNILIGKF 480
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
SE+ E+E A+RLFH+MLEKG+AP+ATTYTS+L+GLCQE+ AA E+F+KS+N D LA+
Sbjct: 481 SEIAEVEEAMRLFHHMLEKGIAPNATTYTSILKGLCQESKFDAAIEIFSKSINQDSKLAQ 540
Query: 541 SILSTFMISLCRR 553
+LSTF+I+LC++
Sbjct: 541 RLLSTFIINLCKK 553
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 79/180 (43%), Gaps = 1/180 (0%)
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+++E +V + L ++ D Y ++ G + E VL++ +K G+ + Y
Sbjct: 380 KIDEMLEVYNVLSSKDYFSDLEGYNVMFSFLCKAGKIREAYGVLQEMKKKGLGTDISMYN 439
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEK 359
+ E + AK+L + + ++ N LIG S I + A+ F+ M+EK
Sbjct: 440 CLMEACCREDLLRPAKKLWDEMFVVGCGVNIKTYNILIGKFSEIAEVEEAMRLFHHMLEK 499
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P +T +++ K LC+ +K D +E++ D + + LC G+ A
Sbjct: 500 GIAPNATTYTSILKGLCQESKFDAAIEIFSKSINQDSKLAQRLLSTFIINLCKKGQFLAA 559
>gi|296082318|emb|CBI21323.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/551 (66%), Positives = 448/551 (81%), Gaps = 2/551 (0%)
Query: 3 MRP-ATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLL 61
M+P A + A RIS+A+I+ASN++RP R W+P LEQTLH+LG + LSPSLVARVI+P+LL
Sbjct: 1 MKPSAIEAAIRISRALIAASNQSRPTRSWSPSLEQTLHRLGCHELLSPSLVARVIDPFLL 60
Query: 62 THHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV 121
HHSLALGFF WASQ+P F H+ +SY S+LKSLS+SRQ NA++ +LK VK KI LDSSV
Sbjct: 61 HHHSLALGFFYWASQKPGFAHTSISYQSVLKSLSISRQFNAVERLLKDVKAQKIVLDSSV 120
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
YR +I S I GK TQ AF +FNEV +IGP+ CNSL+A LASDG + A ++FDEM
Sbjct: 121 YRSVIASHIIGKRTQNAFLIFNEVSALSREIGPDTCNSLVAALASDGCVVYAQRVFDEMI 180
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
H GV +++GFGVFIW+FC NA+LG LS+LDEV K S INGS+IA+LIIHG C+ R
Sbjct: 181 HHGVPLNSLGFGVFIWRFCRNAELGTTLSLLDEVIKHA-SEINGSIIALLIIHGLCQVSR 239
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
V EAF++L+ELR RE KPDF+AYRIV E F+L GS+ E E VLKKKRKLGVAPR NDYRE
Sbjct: 240 VSEAFELLEELRSREYKPDFMAYRIVTEAFRLKGSLAEVEKVLKKKRKLGVAPRENDYRE 299
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGR 361
FI LI ERRI EAKELGEVI++G F I +DVLNAL+GSVSSIDP SA++FF FMI K
Sbjct: 300 FIFVLISERRIPEAKELGEVIINGNFPIGNDVLNALVGSVSSIDPGSAMLFFKFMISKES 359
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
PTL TLSNL +NLCKR K+DEL+EV+ +LS+ +YF+D+E+Y+VMVSFLC +GR+REAYG
Sbjct: 360 FPTLLTLSNLGRNLCKRGKADELLEVFHILSSRNYFSDLETYSVMVSFLCKAGRVREAYG 419
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
V+QEMK+ GLDPD+S YN LMEACCREDLLRPAK+LWD+MFASG NLKTYNILI KFS
Sbjct: 420 VLQEMKKNGLDPDISSYNCLMEACCREDLLRPAKRLWDEMFASGYGVNLKTYNILIQKFS 479
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
E+G+I+ A LF +MLEKGV PDATTYTSLLEGLCQE ++AFEVF KSV DVMLA++
Sbjct: 480 EIGQIQEAQWLFQHMLEKGVNPDATTYTSLLEGLCQEKKFESAFEVFKKSVEQDVMLAQT 539
Query: 542 ILSTFMISLCR 552
IL+TF++ +C+
Sbjct: 540 ILNTFILYICK 550
>gi|225451505|ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080
[Vitis vinifera]
Length = 660
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/551 (66%), Positives = 448/551 (81%), Gaps = 2/551 (0%)
Query: 3 MRP-ATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLL 61
M+P A + A RIS+A+I+ASN++RP R W+P LEQTLH+LG + LSPSLVARVI+P+LL
Sbjct: 1 MKPSAIEAAIRISRALIAASNQSRPTRSWSPSLEQTLHRLGCHELLSPSLVARVIDPFLL 60
Query: 62 THHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV 121
HHSLALGFF WASQ+P F H+ +SY S+LKSLS+SRQ NA++ +LK VK KI LDSSV
Sbjct: 61 HHHSLALGFFYWASQKPGFAHTSISYQSVLKSLSISRQFNAVERLLKDVKAQKIVLDSSV 120
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
YR +I S I GK TQ AF +FNEV +IGP+ CNSL+A LASDG + A ++FDEM
Sbjct: 121 YRSVIASHIIGKRTQNAFLIFNEVSALSREIGPDTCNSLVAALASDGCVVYAQRVFDEMI 180
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
H GV +++GFGVFIW+FC NA+LG LS+LDEV K S INGS+IA+LIIHG C+ R
Sbjct: 181 HHGVPLNSLGFGVFIWRFCRNAELGTTLSLLDEVIKHA-SEINGSIIALLIIHGLCQVSR 239
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
V EAF++L+ELR RE KPDF+AYRIV E F+L GS+ E E VLKKKRKLGVAPR NDYRE
Sbjct: 240 VSEAFELLEELRSREYKPDFMAYRIVTEAFRLKGSLAEVEKVLKKKRKLGVAPRENDYRE 299
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGR 361
FI LI ERRI EAKELGEVI++G F I +DVLNAL+GSVSSIDP SA++FF FMI K
Sbjct: 300 FIFVLISERRIPEAKELGEVIINGNFPIGNDVLNALVGSVSSIDPGSAMLFFKFMISKES 359
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
PTL TLSNL +NLCKR K+DEL+EV+ +LS+ +YF+D+E+Y+VMVSFLC +GR+REAYG
Sbjct: 360 FPTLLTLSNLGRNLCKRGKADELLEVFHILSSRNYFSDLETYSVMVSFLCKAGRVREAYG 419
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
V+QEMK+ GLDPD+S YN LMEACCREDLLRPAK+LWD+MFASG NLKTYNILI KFS
Sbjct: 420 VLQEMKKNGLDPDISSYNCLMEACCREDLLRPAKRLWDEMFASGYGVNLKTYNILIQKFS 479
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
E+G+I+ A LF +MLEKGV PDATTYTSLLEGLCQE ++AFEVF KSV DVMLA++
Sbjct: 480 EIGQIQEAQWLFQHMLEKGVNPDATTYTSLLEGLCQEKKFESAFEVFKKSVEQDVMLAQT 539
Query: 542 ILSTFMISLCR 552
IL+TF++ +C+
Sbjct: 540 ILNTFILYICK 550
>gi|449490189|ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g14080-like [Cucumis sativus]
Length = 640
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/551 (62%), Positives = 432/551 (78%), Gaps = 2/551 (0%)
Query: 3 MRPA-TDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLL 61
MRP +LATR+S+AI+S SN+T PA WTP LEQ LH+LG R L+PSLV++VI+P+LL
Sbjct: 1 MRPHFPELATRLSRAILSISNQTSPAGSWTPSLEQNLHRLGFRQMLNPSLVSQVIDPHLL 60
Query: 62 THHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV 121
+HHSLALGFFNWASQQP FTH+ SY+SILKSLSLSR I S+LKQVK KI LD SV
Sbjct: 61 SHHSLALGFFNWASQQPGFTHNSDSYNSILKSLSLSRHFGPIHSLLKQVKTQKIGLDLSV 120
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
YR +I SLI K T AF VFNEV IG E+CNSLLA LASDG+ ++A K+FDEMS
Sbjct: 121 YRAVIDSLIIAKKTHDAFLVFNEVTSITHIIGSELCNSLLAALASDGFFEHAQKVFDEMS 180
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
+ + F+T+GFGVFIW+ C N + +VL+M+D R NS INGSVIA LIIHG C+ R
Sbjct: 181 LKSIPFNTLGFGVFIWRICRNTDVVKVLNMIDGARTN-NSDINGSVIATLIIHGLCEASR 239
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+EEA +LDEL+ R CKPDF+ Y I+ E F+ +V +RE +LKKKRKLGVAPR NDY+E
Sbjct: 240 LEEASNILDELKNRGCKPDFLTYWILGEAFQSARNVVDREKILKKKRKLGVAPRLNDYKE 299
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGR 361
++ LI RRI EAKELGEVIV G F +D++V N LIGSV+S+DP SAI+FF FM+EKGR
Sbjct: 300 YLFVLIAGRRIREAKELGEVIVKGNFPMDEEVSNVLIGSVASVDPYSAIMFFKFMVEKGR 359
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
PTL TL NLS+NLCK K+DEL+EV++VL N+YF D++ Y++ +SFLC +G+++EAYG
Sbjct: 360 FPTLLTLRNLSRNLCKHGKTDELLEVFQVLCINNYFNDLDRYHLRISFLCKAGKVKEAYG 419
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
V+QEMK+ G DPDVSFYNS++EACCREDLLRPA+KLWD+MFA GC GNLKTY+ILI KFS
Sbjct: 420 VLQEMKKNGFDPDVSFYNSVLEACCREDLLRPARKLWDEMFAGGCCGNLKTYSILIQKFS 479
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
+ +IE AL L+ +ML K V PD YTSLL+GLCQ++ L+AAFEVF+KSV DV LA +
Sbjct: 480 KSNQIEEALVLYSHMLGKNVEPDIAIYTSLLQGLCQDSQLEAAFEVFSKSVEQDVNLAAT 539
Query: 542 ILSTFMISLCR 552
+LSTF++ LC+
Sbjct: 540 LLSTFILCLCK 550
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 79/200 (39%), Gaps = 1/200 (0%)
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
CK + +E +V L I D Y + G V E VL++ +K G P
Sbjct: 373 LCKHGKTDELLEVFQVLCINNYFNDLDRYHLRISFLCKAGKVKEAYGVLQEMKKNGFDPD 432
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFN 354
+ Y + E + A++L + + +G + + LI S S A+V ++
Sbjct: 433 VSFYNSVLEACCREDLLRPARKLWDEMFAGGCCGNLKTYSILIQKFSKSNQIEEALVLYS 492
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+ K P ++ ++L + LC+ ++ + EV+ D + + LC G
Sbjct: 493 HMLGKNVEPDIAIYTSLLQGLCQDSQLEAAFEVFSKSVEQDVNLAATLLSTFILCLCKVG 552
Query: 415 RLREAYGVIQEMKRKGLDPD 434
A +++ + PD
Sbjct: 553 HFLAASKLLRGLASDVAHPD 572
>gi|449442054|ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g14080-like [Cucumis sativus]
Length = 635
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/547 (62%), Positives = 429/547 (78%), Gaps = 2/547 (0%)
Query: 3 MRPA-TDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLL 61
MRP +LATR+S+AI+S SN+T PA WTP LEQ LH+LG R L+PSLV++VI+P+LL
Sbjct: 1 MRPHFPELATRLSRAILSISNQTSPAGSWTPSLEQNLHRLGFRQMLNPSLVSQVIDPHLL 60
Query: 62 THHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV 121
+HHSLALGFFNWASQQP FTH+ SY+SILKSLSLSR I S+LKQVK KI LD SV
Sbjct: 61 SHHSLALGFFNWASQQPGFTHNSDSYNSILKSLSLSRHFGPIHSLLKQVKTQKIGLDLSV 120
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
YR +I SLI K T AF VFNEV IG E+CNSLLA LASDG+ ++A K+FDEMS
Sbjct: 121 YRAVIDSLIIAKKTHDAFLVFNEVTSITHIIGSELCNSLLAALASDGFFEHAQKVFDEMS 180
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
+ + F+T+GFGVFIW+ C N + +VL+M+D R NS INGSVIA LIIHG C+ R
Sbjct: 181 LKSIPFNTLGFGVFIWRICRNTDVVKVLNMIDGARTN-NSDINGSVIATLIIHGLCEASR 239
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+EEA +LDEL+ R CKPDF+ Y I+ E F+ +V +RE +LKKKRKLGVAPR NDY+E
Sbjct: 240 LEEASNILDELKNRGCKPDFLTYWILGEAFQSARNVVDREKILKKKRKLGVAPRLNDYKE 299
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGR 361
++ LI RRI EAKELGEVIV G F +D++V N LIGSV+S+DP SAI+FF FM+EKGR
Sbjct: 300 YLFVLIAGRRIREAKELGEVIVKGNFPMDEEVSNVLIGSVASVDPYSAIMFFKFMVEKGR 359
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
PTL TL NLS+NLCK K+DEL+EV++VL N+YF D++ Y++ +SFLC +G+++EAYG
Sbjct: 360 FPTLLTLRNLSRNLCKHGKTDELLEVFQVLCINNYFNDLDRYHLRISFLCKAGKVKEAYG 419
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
V+QEMK+ G DPDVSFYNS++EACCREDLLRPA+KLWD+MFA GC GNLKTY+ILI KFS
Sbjct: 420 VLQEMKKNGFDPDVSFYNSVLEACCREDLLRPARKLWDEMFAGGCCGNLKTYSILIQKFS 479
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
+ +IE AL L+ +ML K V PD YTSLL+GLCQ++ L+AAFEVF+KSV DV LA +
Sbjct: 480 KSNQIEEALVLYSHMLGKNVEPDIAIYTSLLQGLCQDSQLEAAFEVFSKSVEQDVNLAAT 539
Query: 542 ILSTFMI 548
+LSTF++
Sbjct: 540 LLSTFIL 546
>gi|297811525|ref|XP_002873646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319483|gb|EFH49905.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 634
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/550 (57%), Positives = 422/550 (76%), Gaps = 2/550 (0%)
Query: 3 MRPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLT 62
MRPA +LA RI + ++ S +R AR W+P +EQ+LH LG R S+SPSLVARVI+P+LL
Sbjct: 1 MRPAAELAVRIGRELLKVSGSSRSARIWSPSVEQSLHGLGFRHSISPSLVARVIDPFLLN 60
Query: 63 HHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVY 122
HHSLALGFFNWA+QQP ++H +SYHSI KSLSLSRQ +A+D++ KQVK NKI LDSSVY
Sbjct: 61 HHSLALGFFNWAAQQPGYSHDSVSYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVY 120
Query: 123 RFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSH 182
R +I +L+ G+ +Q AF V E +I P++CN LLA L SD D A K+F +M
Sbjct: 121 RSLIDALVLGRKSQSAFWVLEEALSTGREIHPDVCNRLLAALTSDRCFDYAQKLFVKMRQ 180
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRV 242
RGV +T+GFGV+I FC +++ Q+L ++DEV+K NS INGS+IA+LI+HG CK R
Sbjct: 181 RGVSLNTLGFGVYIGSFCTSSETDQLLRLVDEVKK-ANSNINGSIIALLILHGLCKSSRE 239
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
+AF +L+ELR +CKPDF+AYRI+AE F + G+++ER+VVLKKKRKLGVAPR++DYR F
Sbjct: 240 MDAFYILEELRNIDCKPDFMAYRIIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAF 299
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRV 362
IL LI +R+ EAKE+ EVIVSG F +D+D+L+ALIGSVS+IDP SA+ F +M+ G++
Sbjct: 300 ILDLISAKRLMEAKEVAEVIVSGNFPMDNDILDALIGSVSAIDPDSAVEFLVYMVSTGKL 359
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + TLS LSKNLC+ +KSD L++ Y++LS+ YF+D+ESY++M+SFLC +GR+RE Y
Sbjct: 360 PAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSDLESYSLMISFLCKAGRVREGYTA 419
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ EMK+KGLDPDVS YN+L++ACCR +++RPAKKLWD+MF GC NL TYN+LI K SE
Sbjct: 420 LHEMKKKGLDPDVSLYNALIDACCRAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSE 479
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD-VMLARS 541
GE E +LRLF MLEKG+ PD T Y SL+EGLC+ET L+AA EVF + D +AR
Sbjct: 480 EGEAEESLRLFQKMLEKGIEPDETIYMSLIEGLCKETKLEAALEVFIMCMERDNKTVARR 539
Query: 542 ILSTFMISLC 551
+LS F+++LC
Sbjct: 540 LLSAFVLNLC 549
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/145 (19%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
+ L ++K + D S+Y +I + + + + A +++E+ + N L+ L
Sbjct: 418 TALHEMKKKGLDPDVSLYNALIDACCRAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKL 477
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
+ +G + +L++F +M +G+E + I C+ KL L + +R+N +
Sbjct: 478 SEEGEAEESLRLFQKMLEKGIEPDETIYMSLIEGLCKETKLEAALEVFIMCMERDNKTVA 537
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVL 249
+++ +++ C EA ++L
Sbjct: 538 RRLLSAFVLN-LCSNGHFSEASQLL 561
>gi|30684737|ref|NP_196912.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635762|sp|Q9FMU2.2|PP380_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g14080
gi|332004602|gb|AED91985.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/550 (56%), Positives = 426/550 (77%), Gaps = 2/550 (0%)
Query: 3 MRPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLT 62
MRPAT+LA RI + ++ S +R AR W+PL+EQ+LH LG R S+SPSLVARVI+P+LL
Sbjct: 1 MRPATELAVRIGRELLKVSGSSRAARIWSPLIEQSLHGLGFRHSISPSLVARVIDPFLLN 60
Query: 63 HHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVY 122
HHSLALGFFNWA+QQP ++H +SYHSI KSLSLSRQ +A+D++ KQVK NKI LDSSVY
Sbjct: 61 HHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVY 120
Query: 123 RFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSH 182
R +I +L+ G+ Q AF V E ++I P++CN LLA L SDG D A K+F +M H
Sbjct: 121 RSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRH 180
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRV 242
+GV +T+GFGV+I FC +++ Q+L ++DEV+K N INGS+IA+LI+H CK R
Sbjct: 181 KGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKK-ANLNINGSIIALLILHSLCKCSRE 239
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
+AF +L+ELR +CKPDF+AYR++AE F + G+++ER+VVLKKKRKLGVAPR++DYR F
Sbjct: 240 MDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAF 299
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRV 362
IL LI +R+ EAKE+ EVIVSGKF +D+D+L+ALIGSVS++DP SA+ F +M+ G++
Sbjct: 300 ILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKL 359
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + TLS LSKNLC+ +KSD L++ Y++LS+ YF++++SY++M+SFLC +GR+RE+Y
Sbjct: 360 PAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTA 419
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+QEMK++GL PDVS YN+L+EACC+ +++RPAKKLWD+MF GC NL TYN+LI K SE
Sbjct: 420 LQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSE 479
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD-VMLARS 541
GE E +LRLF MLE+G+ PD T Y SL+EGLC+ET ++AA EVF K + D + R
Sbjct: 480 EGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRR 539
Query: 542 ILSTFMISLC 551
+LS F+++LC
Sbjct: 540 VLSEFVLNLC 549
>gi|9757789|dbj|BAB08287.1| unnamed protein product [Arabidopsis thaliana]
Length = 663
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/550 (56%), Positives = 426/550 (77%), Gaps = 2/550 (0%)
Query: 3 MRPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLT 62
MRPAT+LA RI + ++ S +R AR W+PL+EQ+LH LG R S+SPSLVARVI+P+LL
Sbjct: 1 MRPATELAVRIGRELLKVSGSSRAARIWSPLIEQSLHGLGFRHSISPSLVARVIDPFLLN 60
Query: 63 HHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVY 122
HHSLALGFFNWA+QQP ++H +SYHSI KSLSLSRQ +A+D++ KQVK NKI LDSSVY
Sbjct: 61 HHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVY 120
Query: 123 RFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSH 182
R +I +L+ G+ Q AF V E ++I P++CN LLA L SDG D A K+F +M H
Sbjct: 121 RSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRH 180
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRV 242
+GV +T+GFGV+I FC +++ Q+L ++DEV+K N INGS+IA+LI+H CK R
Sbjct: 181 KGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKK-ANLNINGSIIALLILHSLCKCSRE 239
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
+AF +L+ELR +CKPDF+AYR++AE F + G+++ER+VVLKKKRKLGVAPR++DYR F
Sbjct: 240 MDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAF 299
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRV 362
IL LI +R+ EAKE+ EVIVSGKF +D+D+L+ALIGSVS++DP SA+ F +M+ G++
Sbjct: 300 ILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKL 359
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + TLS LSKNLC+ +KSD L++ Y++LS+ YF++++SY++M+SFLC +GR+RE+Y
Sbjct: 360 PAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTA 419
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+QEMK++GL PDVS YN+L+EACC+ +++RPAKKLWD+MF GC NL TYN+LI K SE
Sbjct: 420 LQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSE 479
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD-VMLARS 541
GE E +LRLF MLE+G+ PD T Y SL+EGLC+ET ++AA EVF K + D + R
Sbjct: 480 EGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRR 539
Query: 542 ILSTFMISLC 551
+LS F+++LC
Sbjct: 540 VLSEFVLNLC 549
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/156 (18%), Positives = 75/156 (48%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY ++ L + ++ + L+++K + D S+Y +I + + + + A +++E+
Sbjct: 399 SYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEM 458
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ N L+ L+ +G + +L++FD+M RG+E + I C+ K+
Sbjct: 459 FVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKI 518
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
+ + + +R++ + V++ +++ G+R
Sbjct: 519 EAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGER 554
>gi|356561647|ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g14080-like [Glycine max]
Length = 647
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/544 (59%), Positives = 418/544 (76%), Gaps = 4/544 (0%)
Query: 10 ATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALG 69
A +S+A+ISAS + +W P +E+ LH+LG R LSPSLV VI+P+L +HHSLALG
Sbjct: 8 ARGLSKAVISASKKRG---RWGPEVEERLHRLGWRQRLSPSLVGNVIDPFLKSHHSLALG 64
Query: 70 FFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSL 129
FFNWASQQP F+H+P ++HS+LKSLS + +AI S+LKQ K + S++ II S
Sbjct: 65 FFNWASQQPGFSHTPFTFHSLLKSLSHTNHFSAIHSLLKQAKALNFPIQPSLFSSIIASH 124
Query: 130 IQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
+ ++AFS++ V +IG NSLLA LASDG +++A ++FDEMS RGV FST
Sbjct: 125 VARNRARQAFSLYCGVGSLSAEIGVATSNSLLAALASDGCLESARRVFDEMSERGVGFST 184
Query: 190 IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVL 249
+GFGVF+W+ C L +V+S+LDEV + S INGSV+AVLI+HG C +V EA +L
Sbjct: 185 LGFGVFVWRVCGEGDLEKVVSLLDEVGEC-GSGINGSVVAVLIVHGLCHASKVSEALWIL 243
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
DELR R KPDF+AY +VA F+ MG+V + VLK KRKLGVAPR++DYR+ ILGL+ E
Sbjct: 244 DELRSRGWKPDFMAYWVVAAAFRSMGNVADEVKVLKMKRKLGVAPRSSDYRDLILGLVSE 303
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
RRI EAKE+GEVIV G F ++DDVLNALIGSVSS+DP SAIVFFNFM+EK R PT+ T+S
Sbjct: 304 RRIYEAKEVGEVIVGGNFPVEDDVLNALIGSVSSVDPGSAIVFFNFMVEKERFPTILTIS 363
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
NLS+NLC K DEL+EV+ VL++++YF D+E YNVMVSFLC +GR+RE Y V+QEMK+K
Sbjct: 364 NLSRNLCGHGKVDELLEVFHVLNSHNYFKDVEGYNVMVSFLCKAGRVREGYSVLQEMKKK 423
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
G P+V+ YN +MEACC+EDLLRPA+KLWD+MF+SGC GNLKTYNILI KFSEVG+ E A
Sbjct: 424 GFRPNVTSYNYIMEACCKEDLLRPARKLWDEMFSSGCCGNLKTYNILIQKFSEVGQAEEA 483
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
LF++ML+KGV PD T+YT LLEGLCQE L+AAFE++NKSV D++LAR ILS+F+ S
Sbjct: 484 HMLFYHMLDKGVEPDVTSYTLLLEGLCQEDKLEAAFELYNKSVKQDIILARDILSSFISS 543
Query: 550 LCRR 553
LCR+
Sbjct: 544 LCRK 547
>gi|357115165|ref|XP_003559362.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g14080-like [Brachypodium distachyon]
Length = 620
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/398 (52%), Positives = 280/398 (70%), Gaps = 1/398 (0%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+CNSLLA LAS G + A K+FD M R E T+GFGVF+ + L +++ V
Sbjct: 122 LCNSLLAALASSGSLAAARKVFDRMLARAAELDTVGFGVFVKNVGRRDGFDEALRLVETV 181
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
R IN SV+A +++ G C+ R+E+A++ L+++R+R KPDFIAYRIV+E ++ G
Sbjct: 182 HHR-GDWINKSVVAAMVVDGLCREGRIEDAWRALEDMRLRGWKPDFIAYRIVSERYREAG 240
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
V E +LK+KRKLGVAPR DYREF+L L+ +R+I EAKE+GE IV G F IDDDVLN
Sbjct: 241 RVEEEGKILKQKRKLGVAPRKVDYREFLLALLSDRQISEAKEMGEAIVLGDFPIDDDVLN 300
Query: 336 ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI SVS ID +AI+F FMIEK R+P+ L L +NLCK K DE+ E+++VL
Sbjct: 301 VLICSVSEIDADAAIMFCKFMIEKDRLPSTEMLVQLCENLCKNRKGDEMWEIFRVLLDRG 360
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
Y T Y+++VSFL +G++REAY V++E+K K LDP +S YNSLM A CR DLLRPAK
Sbjct: 361 YCTSEREYHLVVSFLGKAGKVREAYSVLKEIKGKRLDPGISSYNSLMVALCRNDLLRPAK 420
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
KLWD+MF SGCS NL+TYNILI+KF+E+GE + +LF +ML KGVAPD TYTS++ +
Sbjct: 421 KLWDEMFTSGCSPNLQTYNILITKFAEIGESQEVQQLFDHMLLKGVAPDGATYTSVITVM 480
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
CQE + A E+FNKSV D LA S+L+ F+++LC++
Sbjct: 481 CQEKKYKQAEEIFNKSVVQDPELASSVLTVFILALCKQ 518
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 58/299 (19%), Positives = 117/299 (39%), Gaps = 9/299 (3%)
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
E + + + V + CK ++ +E +++ L R Y +V G V
Sbjct: 323 EKDRLPSTEMLVQLCENLCKNRKGDEMWEIFRVLLDRGYCTSEREYHLVVSFLGKAGKVR 382
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
E VLK+ + + P + Y ++ L + AK+L + + + + + N LI
Sbjct: 383 EAYSVLKEIKGKRLDPGISSYNSLMVALCRNDLLRPAKKLWDEMFTSGCSPNLQTYNILI 442
Query: 339 GSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
+ I + F+ M+ KG P +T +++ +C+ K + E++ D
Sbjct: 443 TKFAEIGESQEVQQLFDHMLLKGVAPDGATYTSVITVMCQEKKYKQAEEIFNKSVVQDPE 502
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS-LMEACCREDLLRPAKK 456
V + LC G + A V+ G+ ++ NS ++ C D+
Sbjct: 503 LASSVLTVFILALCKQGSFKTALSVMS-----GVPSNIESSNSHVILLKCLTDVEEIEMA 557
Query: 457 LWDQMFASG-CSGNLKT-YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
+ G CS + N L++ S ++ +L H + +G+A + + L+E
Sbjct: 558 FEHIKWIMGHCSSTFHSIMNELMASLSTSASLQPVTKLVHYLHSQGLADEVGPWMKLVE 616
>gi|12957716|gb|AAK09234.1|AC084320_21 hypothetical protein [Oryza sativa Japonica Group]
gi|108711404|gb|ABF99199.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 615
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/479 (44%), Positives = 313/479 (65%), Gaps = 8/479 (1%)
Query: 81 THSPLSYHSILKSLSLSRQ------INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN 134
T +P ++H+ L SL+ + + +I + L + + + L + +L++
Sbjct: 37 TSTPQAFHAHLASLAAPSRAAHPATLRSILAALSRARAAGLPLLPATRVLAASALLRHGR 96
Query: 135 TQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
A + F V + P +CNSLLA LAS G + +A K+FD M R VE T+GFGV
Sbjct: 97 LPDALAHFGLVPDSAALPAP-LCNSLLAALASSGSLVSARKVFDRMIGRAVELDTVGFGV 155
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
F+ L +VL ++ VR + ++ SV+AV++ G C+ R+E+A++ L+++R
Sbjct: 156 FVKNVGRRHGLAEVLRLVQAVR-HQGDRVDRSVVAVMVADGLCREGRIEDAWQALEDMRF 214
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
+ KPDF+AYR+V+E F+ G E +LK+KRKLGVAPR DYREF+ L+ R+I E
Sbjct: 215 QGWKPDFVAYRVVSEAFREAGRTEEEGRILKQKRKLGVAPRKEDYREFMFALLSSRQIGE 274
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
AKE+ E IV G F I+DDVLNALI SVS ID +A++F FMI K R P+ L +L ++
Sbjct: 275 AKEIAEAIVLGDFPINDDVLNALICSVSEIDVDAAVMFCKFMIGKERFPSSDMLIHLCES 334
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LC K D++ E ++VL Y TD+ Y+++VSFL +G++REAY V++E+KRK L+PD
Sbjct: 335 LCTNGKGDDMWEFFRVLLDKGYCTDVRDYHLVVSFLGKAGKVREAYDVLKEVKRKRLEPD 394
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+S YNSLME+ CR++LLRPAKKLWD+MF SGCS NL+TYNILI+KF+E+ E E A +LF
Sbjct: 395 ISSYNSLMESLCRKNLLRPAKKLWDEMFTSGCSPNLQTYNILITKFAEINESEQAQQLFD 454
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
M +KGV+PD TTYTS++ LCQE + A E+F K V D +A S+L+ F+++LC++
Sbjct: 455 RMFQKGVSPDVTTYTSVINMLCQEKKYEQAVEIFTKCVVQDTEVASSVLTVFILALCKQ 513
>gi|222625913|gb|EEE60045.1| hypothetical protein OsJ_12833 [Oryza sativa Japonica Group]
Length = 659
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/479 (44%), Positives = 313/479 (65%), Gaps = 8/479 (1%)
Query: 81 THSPLSYHSILKSLSLSRQ------INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN 134
T +P ++H+ L SL+ + + +I + L + + + L + +L++
Sbjct: 81 TSTPQAFHAHLASLAAPSRAAHPATLRSILAALSRARAAGLPLLPATRVLAASALLRHGR 140
Query: 135 TQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
A + F V + P +CNSLLA LAS G + +A K+FD M R VE T+GFGV
Sbjct: 141 LPDALAHFGLVPDSAALPAP-LCNSLLAALASSGSLVSARKVFDRMIGRAVELDTVGFGV 199
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
F+ L +VL ++ VR + ++ SV+AV++ G C+ R+E+A++ L+++R
Sbjct: 200 FVKNVGRRHGLAEVLRLVQAVR-HQGDRVDRSVVAVMVADGLCREGRIEDAWQALEDMRF 258
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
+ KPDF+AYR+V+E F+ G E +LK+KRKLGVAPR DYREF+ L+ R+I E
Sbjct: 259 QGWKPDFVAYRVVSEAFREAGRTEEEGRILKQKRKLGVAPRKEDYREFMFALLSSRQIGE 318
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
AKE+ E IV G F I+DDVLNALI SVS ID +A++F FMI K R P+ L +L ++
Sbjct: 319 AKEIAEAIVLGDFPINDDVLNALICSVSEIDVDAAVMFCKFMIGKERFPSSDMLIHLCES 378
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LC K D++ E ++VL Y TD+ Y+++VSFL +G++REAY V++E+KRK L+PD
Sbjct: 379 LCTNGKGDDMWEFFRVLLDKGYCTDVRDYHLVVSFLGKAGKVREAYDVLKEVKRKRLEPD 438
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+S YNSLME+ CR++LLRPAKKLWD+MF SGCS NL+TYNILI+KF+E+ E E A +LF
Sbjct: 439 ISSYNSLMESLCRKNLLRPAKKLWDEMFTSGCSPNLQTYNILITKFAEINESEQAQQLFD 498
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
M +KGV+PD TTYTS++ LCQE + A E+F K V D +A S+L+ F+++LC++
Sbjct: 499 RMFQKGVSPDVTTYTSVINMLCQEKKYEQAVEIFTKCVVQDTEVASSVLTVFILALCKQ 557
>gi|125545926|gb|EAY92065.1| hypothetical protein OsI_13766 [Oryza sativa Indica Group]
Length = 615
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/479 (44%), Positives = 312/479 (65%), Gaps = 8/479 (1%)
Query: 81 THSPLSYHSILKSLSLSRQ------INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN 134
T +P ++H+ L SL+ + + +I + L + + + L + +L++
Sbjct: 37 TSTPQAFHAHLASLAAPSRAAHPATLRSILAALSRARAAGLPLLPATRVLAASALLRHGR 96
Query: 135 TQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
A + F V + P +CNSLLA LAS G + A K+FD M R +E T+GFGV
Sbjct: 97 LPDALAHFGLVPDSAALPAP-LCNSLLAALASSGSLVTARKVFDRMIGRAIELDTVGFGV 155
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
F+ L +VL ++ VR + ++ SV+AV++ G C+ R+E+A++ L+++R
Sbjct: 156 FVKNVGRRHGLAEVLRLVQAVR-HQGDRVDRSVVAVMVADGLCREGRIEDAWQALEDMRF 214
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
+ KPDF+AYR+V+E F+ G E +LK+KRKLGVAPR DYREF+ L+ R+I E
Sbjct: 215 QGWKPDFVAYRVVSEAFREAGRTEEEGRILKQKRKLGVAPRKEDYREFMFALLSSRQIGE 274
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
AKE+ E IV G F I+DDVLNALI SVS ID +A++F FMI K R P+ L +L ++
Sbjct: 275 AKEIAEAIVLGDFPINDDVLNALICSVSEIDVDAAVMFCKFMIGKERFPSSDMLIHLCES 334
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LC K D++ E ++VL Y TD+ Y+++VSFL +G++REAY V++E+KRK L+PD
Sbjct: 335 LCTNGKGDDMWEFFRVLLDKGYCTDVRDYHLVVSFLGKAGKVREAYDVLKEVKRKRLEPD 394
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+S YNSLME+ CR++LLRPAKKLWD+MF SGCS NL+TYNILI+KF+E+ E E A +LF
Sbjct: 395 ISSYNSLMESLCRKNLLRPAKKLWDEMFTSGCSPNLQTYNILITKFAEINESEQAQQLFD 454
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
M +KGV+PD TTYTS++ LCQE + A E+F K V D +A S+L+ F+++LC++
Sbjct: 455 RMFQKGVSPDVTTYTSVINMLCQEKKYEQAVEIFTKCVVQDTEVASSVLTVFILALCKQ 513
>gi|357503669|ref|XP_003622123.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497138|gb|AES78341.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 495
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/379 (54%), Positives = 281/379 (74%), Gaps = 14/379 (3%)
Query: 188 STIGFGVFIWK--FCEN-----------AKLGQVLSMLDEVRKRENSMINGSVIAVLIIH 234
S +G+ + ++ +CEN +G+VL ++DEV + INGSV+AVLI+H
Sbjct: 12 SWVGYDICNYEGFYCENPPGNKSVIALEGDMGKVLGLVDEVGEC-GFEINGSVVAVLIVH 70
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
G C+ +V+EA +L ELR R KPDF+AY +VA EF+ MG+V VLK KRKLGVAP
Sbjct: 71 GLCEVGKVDEAMVMLGELRERGWKPDFMAYWVVANEFRKMGNVVVEIKVLKMKRKLGVAP 130
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFN 354
R+ DY+ FI L+ E+RI EAK GEVIV G F ++DDV N LI SVS IDP AIVFFN
Sbjct: 131 RSGDYKGFIFELVSEKRILEAKMTGEVIVGGNFVVEDDVFNVLIESVSDIDPVGAIVFFN 190
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
+++EK R ++S+L++LS+NLC+ K DEL+EV++VL +YF D+E YNVMVS+LC +G
Sbjct: 191 YVVEKERFLSVSSLNSLSRNLCRVGKVDELLEVFRVLDCRNYFKDVEGYNVMVSWLCEAG 250
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
R++E Y V+QEMK+KGL+PDVS YN +MEACC+EDLLRPA+KLWD+MFASGC GNLKTYN
Sbjct: 251 RVKEGYAVLQEMKKKGLNPDVSSYNYVMEACCKEDLLRPARKLWDEMFASGCCGNLKTYN 310
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
+LI KF E G IE A LF+ M++KGV PD+ +YT LL+G C+E L+ AFE++++SV
Sbjct: 311 VLIHKFLEEGLIEEARTLFNRMVDKGVEPDSASYTFLLQGFCREDKLEEAFELYSRSVRQ 370
Query: 535 DVMLARSILSTFMISLCRR 553
D+ +AR IL +F++SLC++
Sbjct: 371 DITIARDILGSFILSLCKK 389
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 1/185 (0%)
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
C+ +V+E +V L R D Y ++ G V E VL++ +K G+ P
Sbjct: 211 LCRVGKVDELLEVFRVLDCRNYFKDVEGYNVMVSWLCEAGRVKEGYAVLQEMKKKGLNPD 270
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFN 354
+ Y + E + A++L + + + + N LI + A FN
Sbjct: 271 VSSYNYVMEACCKEDLLRPARKLWDEMFASGCCGNLKTYNVLIHKFLEEGLIEEARTLFN 330
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M++KG P ++ + L + C+ +K +E E+Y D + + LC G
Sbjct: 331 RMVDKGVEPDSASYTFLLQGFCREDKLEEAFELYSRSVRQDITIARDILGSFILSLCKKG 390
Query: 415 RLREA 419
+ A
Sbjct: 391 HMTAA 395
>gi|414588666|tpg|DAA39237.1| TPA: hypothetical protein ZEAMMB73_057781 [Zea mays]
Length = 610
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/400 (50%), Positives = 282/400 (70%), Gaps = 3/400 (0%)
Query: 156 ICNSLLAVLASD-GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC-ENAKLGQVLSMLD 213
+CNSLL+ LAS G + +A K+FD M VE +T+GFGVF+ ++ L +VL ++D
Sbjct: 115 LCNSLLSALASSTGSLGHARKVFDRMLAGAVELNTVGFGVFVNAAGRKDDGLAEVLRLVD 174
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
V + +N SV+ +++ G C+ R+E+A++ +DE+R+R KPDF+AYRIVAE F++
Sbjct: 175 VV-GCQGRRVNRSVVVAMLVDGMCREGRIEDAWRAMDEMRLRGWKPDFLAYRIVAEGFRV 233
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
G V E +LK+KRKLGVAPR ++YRE +L L+ R EAKE+ E +V G F IDDDV
Sbjct: 234 QGRVEEEGRILKQKRKLGVAPRKDEYRECVLVLVSNRLFREAKEIAEAVVLGDFPIDDDV 293
Query: 334 LNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
LN L+GSVS ID A +F FM+ KGR P+ L++L ++LCK K DE+ E+ +VL
Sbjct: 294 LNILVGSVSEIDVDGAAMFCKFMMGKGRFPSTEMLAHLCESLCKSGKGDEMWEILRVLLD 353
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
Y + Y+++VSFL +G++REAY V++E+K+K L+PD+S YNSLMEA CR DLLRP
Sbjct: 354 KGYCRNARGYHLVVSFLGKAGKVREAYDVLKEVKKKRLEPDISSYNSLMEALCRNDLLRP 413
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
AKKLWD+MF SGCS NL+TYNILI+KF+E+GE + +LF +M +KGVAPD TYTS +
Sbjct: 414 AKKLWDEMFTSGCSPNLQTYNILITKFTEMGESQEVQQLFDHMFQKGVAPDGATYTSFIN 473
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
LCQE + A EVFNKS D +A +LS+F+++LC++
Sbjct: 474 MLCQENKYERALEVFNKSWMQDAGVASFVLSSFILALCKQ 513
>gi|357503663|ref|XP_003622120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497135|gb|AES78338.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 184/349 (52%), Positives = 244/349 (69%), Gaps = 33/349 (9%)
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
LG+VL +DEV + INGS++ VLI+HG C+ +V+E PDF+AY
Sbjct: 447 LGKVLGFMDEVGEC-GFEINGSIVVVLIVHGLCEVGKVDE--------------PDFMAY 491
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+VA EF+ +G+V VLK KRKLGVAPR DY+ FI L+ E+RI EAK GEVIV
Sbjct: 492 WVVANEFRKIGNVVVEIKVLKMKRKLGVAPRNGDYKGFIFELVSEKRILEAKMTGEVIVG 551
Query: 325 GKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
G F ++DDV N LI SVS IDP AIVFFN+++EK R ++S+L++LS+NLC+ K DEL
Sbjct: 552 GNFVVEDDVFNVLIESVSDIDPVGAIVFFNYVVEKERFLSVSSLNSLSRNLCRVGKVDEL 611
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+EV++VL +YF D+E YNVM EMK+KGL+PDVS YN +MEA
Sbjct: 612 LEVFRVLDCRNYFKDVEGYNVM------------------EMKKKGLNPDVSSYNYVMEA 653
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
CC+EDLLRPA+KLWD+MFASGC GNLKTYN+LI KF + G IE A LF+ M++KGV PD
Sbjct: 654 CCKEDLLRPARKLWDEMFASGCCGNLKTYNVLIHKFLKEGLIEEARTLFNRMVDKGVEPD 713
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ +YT LL+G CQE L+ AFE++++SV D+ +AR IL +F++SLC++
Sbjct: 714 SASYTFLLQGFCQEDKLEEAFELYSRSVRQDITIARDILGSFILSLCKK 762
>gi|115455731|ref|NP_001051466.1| Os03g0782900 [Oryza sativa Japonica Group]
gi|113549937|dbj|BAF13380.1| Os03g0782900, partial [Oryza sativa Japonica Group]
Length = 284
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 96/181 (53%), Positives = 137/181 (75%)
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
++LC K D++ E ++VL Y TD+ Y+++VSFL +G++REAY V++E+KRK L+
Sbjct: 2 ESLCTNGKGDDMWEFFRVLLDKGYCTDVRDYHLVVSFLGKAGKVREAYDVLKEVKRKRLE 61
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
PD+S YNSLME+ CR++LLRPAKKLWD+MF SGCS NL+TYNILI+KF+E+ E E A +L
Sbjct: 62 PDISSYNSLMESLCRKNLLRPAKKLWDEMFTSGCSPNLQTYNILITKFAEINESEQAQQL 121
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
F M +KGV+PD TTYTS++ LCQE + A E+F K V D +A S+L+ F+++LC+
Sbjct: 122 FDRMFQKGVSPDVTTYTSVINMLCQEKKYEQAVEIFTKCVVQDTEVASSVLTVFILALCK 181
Query: 553 R 553
+
Sbjct: 182 Q 182
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 2/163 (1%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
YH ++ L + ++ VLK+VK ++ D S Y ++ SL + + A +++E+
Sbjct: 32 YHLVVSFLGKAGKVREAYDVLKEVKRKRLEPDISSYNSLMESLCRKNLLRPAKKLWDEMF 91
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
+ + N L+ A + A ++FD M +GV + I C+ K
Sbjct: 92 TSGCSPNLQTYNILITKFAEINESEQAQQLFDRMFQKGVSPDVTTYTSVINMLCQEKKYE 151
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVL 249
Q + + + ++ + SV+ V I+ CK + A VL
Sbjct: 152 QAVEIFTKCVVQDTE-VASSVLTVFIL-ALCKQGNFKGALSVL 192
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 115/290 (39%), Gaps = 23/290 (7%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L ++G D+ + F + +G + + + + K+ + +L EV+++
Sbjct: 4 LCTNGKGDDMWEFFRVLLDKGYCTDVRDYHLVVSFLGKAGKVREAYDVLKEVKRKRLEPD 63
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
S +++ C+ + A K+ DE+ C P+ Y I+ +F + + + +
Sbjct: 64 ISSYNSLM--ESLCRKNLLRPAKKLWDEMFTSGCSPNLQTYNILITKFAEINESEQAQQL 121
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
+ + GV+P Y I L E++ +A E+ V + VL I ++
Sbjct: 122 FDRMFQKGVSPDVTTYTSVINMLCQEKKYEQAVEIFTKCVVQDTEVASSVLTVFILALCK 181
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSN----------LSKNLCKRNKSDELVEVYKVLSA 393
NF KG + LS + + L K L + D +E K + +
Sbjct: 182 QG--------NF---KGALSVLSCIPSNVESVNSHVILLKCLIDVGEVDLAIEHIKSIRS 230
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
N + N +++ L TS L+ +I + +G+ DV + LME
Sbjct: 231 NFSSSFQNIINELMASLSTSASLQPVTRLISYLNSQGIVHDVGPWMGLME 280
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/520 (25%), Positives = 237/520 (45%), Gaps = 45/520 (8%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSV 106
L PS+V RV+ L A+ FF+W + QP + HS + + +L + ++ +
Sbjct: 97 LVPSVVGRVLQQ--LDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDL 154
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVL 164
K + + DS Y +I + ++ Q+A+ + +E++ I P + N+++ L
Sbjct: 155 FKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK--RGIVPHNAVYNTIIKGL 212
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
+G +D+AL + +M R S I + + + C++A++ +L+++ E
Sbjct: 213 CDNGRVDSALVHYRDM-QRNCAPSVITYTILVDALCKSARISDASLILEDMI--EAGCAP 269
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
V +I+GFCK ++EA + +++ C PD Y I+ + + + +L
Sbjct: 270 NVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLL 329
Query: 285 KKKRKLGVAPRTNDYR--------------EFILGLIVERRICE---------------- 314
++ K G P Y F L ++ RR C+
Sbjct: 330 QEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKV 389
Query: 315 -----AKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTL 368
A EL +++ D N +I G+ + A M E G P + T
Sbjct: 390 GQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTY 449
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+++ LCK ++ DE EVY+VL YF D+ + + ++ LC S RL +A +++EM+R
Sbjct: 450 NSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMER 509
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
G PDV Y L+ C+ D L + + +M GC + TY+I+I K + +
Sbjct: 510 NGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRD 569
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
L MLE+GV PDA YTS+++GLC+ + A+E++
Sbjct: 570 GCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELY 609
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 119/505 (23%), Positives = 207/505 (40%), Gaps = 19/505 (3%)
Query: 38 LHQLGLRDSLSPSLVARVI------NPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSIL 91
+H ++ + +PS++ I ++ SL L A PN ++Y++++
Sbjct: 223 VHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNV----VTYNTLI 278
Query: 92 KSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCE 150
++ + Q+ N + D Y +I + + Q + E VK+ CE
Sbjct: 279 NGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCE 338
Query: 151 DIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV 208
P N+L+ L G +A + M R + S F + I FC+ +L
Sbjct: 339 ---PNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLA 395
Query: 209 LSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVA 268
+ + R + ++I G C+ R+++A ++L+ + C PD + Y +
Sbjct: 396 YELFQLMTDR--GCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIV 453
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFT 328
V E V + R G I GL RR+ +A++L +
Sbjct: 454 SGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSA 513
Query: 329 IDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
D LI D ++ FF+ M++KG VPT+ T S + LCK + + +
Sbjct: 514 PDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCML 573
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
K + D Y ++ LC S EAY + + MK+ G P V YN L++ C+
Sbjct: 574 LKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCK 633
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
L A L + M + GC + TYN + F + E + A RLF M +G +P
Sbjct: 634 VSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFM 693
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSV 532
Y+ LL L E + A E++ +++
Sbjct: 694 YSLLLTKLVAEEKMDQAMEIWEEAL 718
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 156/361 (43%), Gaps = 29/361 (8%)
Query: 205 LGQVLSMLDEVRKR---------ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
+G+VL LD++ K + + ++ F + K+ +EA+ + R
Sbjct: 102 VGRVLQQLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCG 161
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
C PD I Y + F + +L + K G+ P Y I GL R+ A
Sbjct: 162 LCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSA 221
Query: 316 --------KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
+ +++ +TI +++AL S D A + MIE G P + T
Sbjct: 222 LVHYRDMQRNCAPSVIT--YTI---LVDALCKSARISD---ASLILEDMIEAGCAPNVVT 273
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ L CK DE V ++ + N D+ +YN+++ C R ++ ++QEM
Sbjct: 274 YNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMV 333
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
+ G +P+ YN+LM++ + A L M C + T+N++I F +VG+++
Sbjct: 334 KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLD 393
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK----SVNHDVMLARSIL 543
A LF M ++G PD TY ++ G C+ + A ++ + DV+ SI+
Sbjct: 394 LAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIV 453
Query: 544 S 544
S
Sbjct: 454 S 454
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 230/469 (49%), Gaps = 5/469 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY+ ++ L +++ S+L ++ + D+ Y +I L++G+N A + +E+
Sbjct: 282 SYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEM 341
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ I P + + + V++ +G ++ A +FD M GV + I F +
Sbjct: 342 VSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNV 401
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ +L E++KR N +I+ + G C ++ A+ ++ E+ C+P+ + Y
Sbjct: 402 RKGYELLVEIKKR-NIVISPYTYGT-AVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYT 459
Query: 266 IVAEEFKLMGSVFEREV-VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + F L S F V VLK+ R+ G+AP T Y I+GL +++ EA+ +V
Sbjct: 460 TLIKTF-LQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVE 518
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
F D A I G + + + SA + M+E G +P + L CK+ K E
Sbjct: 519 NGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIE 578
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
++ + D ++Y V+++ L +G++ +A + EM+ KG+ PDV Y +L++
Sbjct: 579 ACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLID 638
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+ ++ A ++D+M +G + N+ YN+L+ F GEIE A L M KG P
Sbjct: 639 GFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPP 698
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+A TY ++++G C+ +L AF++F++ ++ + +T + CR
Sbjct: 699 NAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCR 747
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 188/450 (41%), Gaps = 36/450 (8%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F+ P+ Y + +S + ++ + +T + Y +I + KN +K
Sbjct: 345 GFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKG 404
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ + E+K I P + + + S G +D A + EM G + + + I
Sbjct: 405 YELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKT 464
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
F + ++ G + +L E+ RE + + +I G K K+++EA L E+ K
Sbjct: 465 FLQKSRFGDAVRVLKEM--REQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFK 522
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD Y + G + +K+ + GV P + GLI E C+
Sbjct: 523 PDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPN----KVLCTGLINE--YCKK--- 573
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
G+VI A F M+E+G + T + L L K
Sbjct: 574 GKVI-------------------------EACSAFRSMVEQGILGDAKTYTVLMNGLVKN 608
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
K ++ E++ + D+ SY ++ G +++A + EM + GL +V Y
Sbjct: 609 GKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIY 668
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
N L+ CR + AK+L D+M G N TY +I + + G++ A +LF M
Sbjct: 669 NMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKL 728
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
KG+ PD+ YT+L++G C+ +++ A +F
Sbjct: 729 KGLVPDSFVYTTLVDGCCRLNDVERAITIF 758
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 183/414 (44%), Gaps = 42/414 (10%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALK 175
D+ Y ++ L++ A +F+E++ + I P++ + +L+ + G + A
Sbjct: 594 DAKTYTVLMNGLVKNGKVNDAEEIFHEMR--GKGIAPDVFSYGTLIDGFSKLGNMQKASS 651
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+FDEM G+ + I + + + FC + ++ + +LDE+ + +V II G
Sbjct: 652 IFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGK--GFPPNAVTYCTIIDG 709
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
+CK + EAF++ DE++++ PD Y + + + V ER + + + + G A
Sbjct: 710 YCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV-ERAITIFETNEKGCASS 768
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNF 355
+ + I V GK + D++N L+ + V +N
Sbjct: 769 SAPFNALI---------------NWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNI 813
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
MI+ LCK + E++ + + + +Y +++ GR
Sbjct: 814 MIDY---------------LCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGR 858
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA-----SGCSGNL 470
E + V E+ G++PD Y+ ++ A +E + A L DQMFA GC ++
Sbjct: 859 RSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSI 918
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
T L+S F++VGE+E A ++ NM+ PD++T L+ C +N + A
Sbjct: 919 STCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRMA 972
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 119/557 (21%), Positives = 213/557 (38%), Gaps = 93/557 (16%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWAS-----------QQPNFTHSPLSYHSILKSL 94
+L ++ + P + SL GFF + ++ N SP +Y + +K +
Sbjct: 371 ALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGM 430
Query: 95 SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGP 154
S ++ +++K++ + + +Y +I + +Q A V E++ + I P
Sbjct: 431 CSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMRE--QGIAP 488
Query: 155 E-IC-NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML 212
+ C NSL+ L+ +D A EM G + +G FI + E + +
Sbjct: 489 DTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYV 548
Query: 213 DEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
E+ E +I V+ +I+ +CK +V EA + + D Y ++
Sbjct: 549 KEML--ECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLV 606
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
G V + E + + R G+AP Y I G +LG +
Sbjct: 607 KNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGF---------SKLGNM----------- 646
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
+ A F+ M++ G + + L C+ + ++ E+ +S
Sbjct: 647 --------------QKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMS 692
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ + +Y ++ C SG L EA+ + EMK KGL PD Y +L++ CCR + +
Sbjct: 693 GKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 752
Query: 453 PA--------------------------------------KKLWDQMFASGCSGNLKTYN 474
A +L D F N TYN
Sbjct: 753 RAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYN 812
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK---- 530
I+I + G +E A LFH+M + + P TYTSLL G + F VF++
Sbjct: 813 IMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAA 872
Query: 531 SVNHDVMLARSILSTFM 547
+ D ++ I++ F+
Sbjct: 873 GIEPDNIMYSVIINAFL 889
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 130/629 (20%), Positives = 227/629 (36%), Gaps = 112/629 (17%)
Query: 36 QTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQP----------------- 78
+TL L ++P +V V+ + S L FFN Q
Sbjct: 49 ETLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNLVDSQKVTEQKLDSFSFLALDLC 108
Query: 79 NFTHSPLSYHSILKSLSLSRQINAI-DSVLKQVK--VNKITLDSSVYRFIIPSLIQGKNT 135
NF ++ +++ + + + S+++ ++ V K ++ +I I+
Sbjct: 109 NFGSIEKAHSVVIRMIERKWPVAEVWSSIVRCLREFVGKSDDRVLLFGILIDGYIEKGFL 168
Query: 136 QKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
+A VF+ K D+ P + CN LL L +D ++ M R V F +
Sbjct: 169 DEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYE 228
Query: 194 VFIWKFCENA--------------KLGQVLSMLDEVRKRENSMINGSVIAV-----LIIH 234
+ I C + +LG +DE + + SM ++ L+I
Sbjct: 229 MLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLID 288
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE------------------------ 270
G CK KR+E+A +L E+ D +AY I+ +
Sbjct: 289 GLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSI 348
Query: 271 ----FKLMGSVFEREVVLKKKRKL-------GVAPRTNDYREFILGLIVERRICEAKELG 319
+ V +E ++K + L GV P Y I G E+ + + EL
Sbjct: 349 DPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELL 408
Query: 320 EVIVSGKFTIDDDVLN-ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
I I A+ G SS D A M G P + + L K ++
Sbjct: 409 VEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQK 468
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
++ + V V K + D YN ++ L + ++ EA + EM G PD Y
Sbjct: 469 SRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTY 528
Query: 439 NS-----------------------------------LMEACCREDLLRPAKKLWDQMFA 463
+ L+ C++ + A + M
Sbjct: 529 GAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVE 588
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G G+ KTY +L++ + G++ A +FH M KG+APD +Y +L++G + N+Q
Sbjct: 589 QGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQK 648
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCR 552
A +F++ V + I + + CR
Sbjct: 649 ASSIFDEMVQAGLTSNVIIYNMLLGGFCR 677
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 176/455 (38%), Gaps = 57/455 (12%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFD 178
++ +I I+ +A VF+ K D+ P + CN LL L +D ++
Sbjct: 154 LFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYK 213
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENA--------------KLGQVLSMLDEVRKRENSMIN 224
M R V F + + I C + +LG +DE + + SM
Sbjct: 214 GMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSC 273
Query: 225 GSVIAV-----LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
++ L+I G CK KR+E+A +L E+ D +AY I+
Sbjct: 274 KGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSIL------------ 321
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
I GL+ R A L +VS F+ID + + I
Sbjct: 322 -----------------------IDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFIC 358
Query: 340 SVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
+S A F+ MI G P ++L + + + E+ + +
Sbjct: 359 VMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVI 418
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+Y V +C+SG L AY +++EM G P+V Y +L++ ++ A ++
Sbjct: 419 SPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVL 478
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M G + + YN LI S+ +++ A M+E G PDA TY + + G +
Sbjct: 479 KEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEA 538
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+A + + + V+ + + + + C++
Sbjct: 539 GEFASADKYVKEMLECGVIPNKVLCTGLINEYCKK 573
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 208/411 (50%), Gaps = 3/411 (0%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
Y +I ++ + ++AF + +E+ + I N+LL + G ++ AL++ EM
Sbjct: 313 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 372
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
+GVE + + + I C + + +LDE++KR+ + + +II+G C+
Sbjct: 373 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK--LAPTVLTYSVIINGLCRCG 430
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
++ +L E+ + KP+ + Y + G V E ++L++ R+ G+ P Y
Sbjct: 431 NLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYN 490
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK 359
I+G +R+ EA+ ++ + + A I G + + A +FN M+
Sbjct: 491 SLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC 550
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G +P + + L + CK E V++ + + D+++Y+V++ L +G++ EA
Sbjct: 551 GVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEA 610
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+G+ E++ KGL P+ YNSL+ C++ + A +L ++M G + ++ TYNILI
Sbjct: 611 FGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDG 670
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ GEIE A LF ++ +G+ P+ TY ++++G C+ N AAF++ +
Sbjct: 671 LCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEE 721
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 201/441 (45%), Gaps = 8/441 (1%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
++++L + + ++ +++++ + DS Y +I +G+N +AF + +E+K
Sbjct: 349 WNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMK 408
Query: 147 FNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ P + + + L G + + EM G++ + + + + + +
Sbjct: 409 K--RKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGR 466
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ + +L+ R RE ++ +I GFCK KR+EEA L E+ R +P+ Y
Sbjct: 467 VEESRMILE--RMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTY 524
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + G + + + GV P Y I G E + EA + I+S
Sbjct: 525 GAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILS 584
Query: 325 GKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ D + LI +S + A F+ + EKG +P T ++L CK+ D+
Sbjct: 585 RRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDK 644
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
++ + + D+ +YN+++ LC +G + A + +++ +GL P+ Y ++++
Sbjct: 645 ASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVD 704
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C+ A +L ++M G + YN++++ + + E AL LF MLEKG A
Sbjct: 705 GYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA- 763
Query: 504 DATTYTSLLEGLCQETNLQAA 524
++ +L+EG C+ LQ A
Sbjct: 764 STVSFNTLIEGYCKSGKLQEA 784
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 173/388 (44%), Gaps = 16/388 (4%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE-----NAK-----LG 206
CNSLL L ++ K+FD M V + I C+ +AK +G
Sbjct: 192 CNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMG 251
Query: 207 QVLSMLDEVRKRENSMINGSVIAVL-----IIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ +LDE + + SM++ ++ L +I+GFC KR EA +L E+ KP+
Sbjct: 252 EKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEP 311
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
I Y + + F G + + + + G+ + + G+ ++ +A E+ +
Sbjct: 312 ITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQE 371
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
++ D + LI G + A + M ++ PT+ T S + LC+
Sbjct: 372 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN 431
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+ + + N + Y +++ GR+ E+ +++ M+ +G+ PDV YNS
Sbjct: 432 LQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNS 491
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L+ C+ + A+ +M N TY I +S+ GE+E A R F+ ML G
Sbjct: 492 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG 551
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVF 528
V P+ YT+L+EG C+E N+ AF VF
Sbjct: 552 VLPNVGIYTALIEGHCKEGNVTEAFSVF 579
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/445 (22%), Positives = 198/445 (44%), Gaps = 16/445 (3%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE-- 144
Y +++ + + ++ +L++++ I D Y +I + K ++A + E
Sbjct: 454 YTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEML 513
Query: 145 ---VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
++ N G + + + G ++ A + F+EM GV + + I C+
Sbjct: 514 ERRLRPNAHTYG-----AFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCK 568
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ + S+ + R ++ ++IHG + ++ EAF + EL+ + P+
Sbjct: 569 EGNVTEAFSVFRFILSRR--VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA 626
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
Y + G+V + +L++ G+ P Y I GL I AK L +
Sbjct: 627 FTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDD 686
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC-KRN 379
I T + A++ G S +P +A M+ +G VP + + N+ N C K
Sbjct: 687 IEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG-VPPDAFIYNVILNFCCKEE 745
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K ++ +++++ + F S+N ++ C SG+L+EA +++EM K P+ Y
Sbjct: 746 KFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYT 804
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
SL++ C+ ++ AK+LW +M KTY L+ + +G + LF M+ K
Sbjct: 805 SLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAK 864
Query: 500 GVAPDATTYTSLLEGLCQETNLQAA 524
G+ PD TY +++ C+E N+ A
Sbjct: 865 GIEPDKMTYYVMIDAYCREGNVMEA 889
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 93/171 (54%)
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
DE +E+ + + D+ +Y+++++ C R REA ++ EM GL P+ YN+L
Sbjct: 258 DEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNAL 317
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
++ R+ + A ++ D+M A G NL +N L++ + G++E AL + M+EKGV
Sbjct: 318 IDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGV 377
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
PD+ TY+ L+EG C+ N+ AFE+ ++ + S + LCR
Sbjct: 378 EPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCR 428
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/416 (21%), Positives = 172/416 (41%), Gaps = 43/416 (10%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
SV + + ++ D Y +I L + +AF +F+E++ NSL++
Sbjct: 577 SVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS 636
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
G +D A ++ +EM +G+ + + + I C+ ++ + ++ D++ R +
Sbjct: 637 CKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGR--GLTP 694
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
V ++ G+CK K AF++L+E+ +R PD Y ++ F FE+ + L
Sbjct: 695 NCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILN-FCCKEEKFEKALDL 753
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
++ T + I G ++ EA L E
Sbjct: 754 FQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEE----------------------- 790
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
MIEK +P T ++L + CK E ++ + + ++Y
Sbjct: 791 -----------MIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYT 839
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
++ G + E + +EM KG++PD Y +++A CRE + A KL D++
Sbjct: 840 SLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVK 899
Query: 465 GC---SG---NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
G SG L T +++ F G ++ A + +M++ G + T+ L++G
Sbjct: 900 GMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 955
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 138/316 (43%), Gaps = 19/316 (6%)
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
KG +VE +KV D + + PD Y + +G+V + + VL ++G R
Sbjct: 201 KGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVL---LEMGEKARLL 257
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFM 356
D EA EL +V D + LI G R A + M
Sbjct: 258 D---------------EAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEM 302
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
I+ G P T + L ++ ++ + + A ++ +N +++ +C +G++
Sbjct: 303 IDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKM 362
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
+A ++QEM KG++PD Y+ L+E CR + A +L D+M + + TY+++
Sbjct: 363 EKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVI 422
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I+ G ++G + M+ G+ P+A YT+L+ +E ++ + + + +
Sbjct: 423 INGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGI 482
Query: 537 MLARSILSTFMISLCR 552
+ ++ +I C+
Sbjct: 483 LPDVFCYNSLIIGFCK 498
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 67/274 (24%)
Query: 329 IDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT----LSTLSNLSKNLCKRN----- 379
++ D++ ++I DP+ + FF + K T L LS L+ NLC N
Sbjct: 61 LNTDIIRSVILQNQVGDPKRLLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGPA 120
Query: 380 ---------KSDE-------LVEVYKVL--SANDYFTDM--ESYNVMVSFLCTSGRLREA 419
SD +V+ Y+ S N DM +SY M G L EA
Sbjct: 121 SDLIKCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKM-------GFLVEA 173
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK-----KLWDQMFASGCSGNLKTYN 474
V K P + NSL+ DLL+ K K++D M A ++ TY
Sbjct: 174 VNVFLGPKNFEFRPSLLSCNSLLG-----DLLKGNKVELFWKVFDGMCAHKVLPDVYTYT 228
Query: 475 ILISKFSEVGEIEGALRLF-----------------HNMLEKGVAPDATTYTSLLEGLCQ 517
+IS +VG ++ A R+ +M++KG+ PD TY L+ G C
Sbjct: 229 NMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCM 288
Query: 518 ETNLQAA----FEVFNKSVNHDVMLARSILSTFM 547
E + A E+ + + + + +++ FM
Sbjct: 289 EKRSREAKLMLLEMIDVGLKPEPITYNALIDGFM 322
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 60/322 (18%), Positives = 123/322 (38%), Gaps = 64/322 (19%)
Query: 16 AIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWAS 75
++IS S + K + LLE+ + + INP ++T++ L G
Sbjct: 631 SLISGSCKQGNVDKASQLLEE--------------MCIKGINPDIVTYNILIDGLCKAGE 676
Query: 76 -----------QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
+ T + ++Y +++ S+ A +L+++ + + D+ +Y
Sbjct: 677 IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNV 736
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
I+ + + +KA +F EM +G
Sbjct: 737 ILNFCCKEEKFEKALD-----------------------------------LFQEMLEKG 761
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
ST+ F I +C++ KL + +L+E+ +++ I V +I CK + E
Sbjct: 762 FA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQ--FIPNHVTYTSLIDHNCKAGMMGE 818
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A ++ E++ R P Y + + +G++ E + ++ G+ P Y I
Sbjct: 819 AKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMID 878
Query: 305 GLIVERRICEAKEL-GEVIVSG 325
E + EA +L E++V G
Sbjct: 879 AYCREGNVMEACKLKDEILVKG 900
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 208/411 (50%), Gaps = 3/411 (0%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
Y +I ++ + ++AF + +E+ + I N+LL + G ++ AL++ EM
Sbjct: 322 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 381
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
+GVE + + + I C + + +LDE++KR+ + + +II+G C+
Sbjct: 382 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK--LAPTVLTYSVIINGLCRCG 439
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
++ +L E+ + KP+ + Y + G V E ++L++ R+ G+ P Y
Sbjct: 440 NLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYN 499
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK 359
I+G +R+ EA+ ++ + + A I G + + A +FN M+
Sbjct: 500 SLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC 559
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G +P + + L + CK E V++ + + D+++Y+V++ L +G++ EA
Sbjct: 560 GVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEA 619
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+G+ E++ KGL P+ YNSL+ C++ + A +L ++M G + ++ TYNILI
Sbjct: 620 FGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDG 679
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ GEIE A LF ++ +G+ P+ TY ++++G C+ N AAF++ +
Sbjct: 680 LCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEE 730
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/474 (21%), Positives = 213/474 (44%), Gaps = 16/474 (3%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE-- 144
Y +++ + + ++ +L++++ I D Y +I + K ++A + E
Sbjct: 463 YTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEML 522
Query: 145 ---VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
++ N G + + + G ++ A + F+EM GV + + I C+
Sbjct: 523 ERRLRPNAHTYG-----AFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCK 577
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ + S+ + R ++ ++IHG + ++ EAF + EL+ + P+
Sbjct: 578 EGNVTEAFSVFRFILSRR--VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA 635
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
Y + G+V + +L++ G+ P Y I GL I AK L +
Sbjct: 636 FTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDD 695
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC-KRN 379
I T + A++ G S +P +A M+ +G VP + + N+ N C K
Sbjct: 696 IEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG-VPPDAFIYNVILNFCCKEE 754
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K ++ +++++ + F S+N ++ C SG+L+EA +++EM K P+ Y
Sbjct: 755 KFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYT 813
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
SL++ C+ ++ AK+LW +M KTY L+ + +G + LF M+ K
Sbjct: 814 SLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAK 873
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
G+ PD TY +++ C+E N+ A ++ ++ + + ++ + + +LC++
Sbjct: 874 GIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKK 927
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 170/408 (41%), Gaps = 38/408 (9%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CNSLL L ++ K+FD M V + I C+ + +L E+
Sbjct: 183 CNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMG 242
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
++ S V +II G C+ + ++EA ++ + + PD Y I+ F +
Sbjct: 243 EKGCS--PNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKR 300
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
E +++L + +G+ P Y I G + + I +A + + +V+ + + N
Sbjct: 301 SREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNT 360
Query: 337 LIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
L+ V A+ M+EKG P T S L + C+ E+ +
Sbjct: 361 LLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK 420
Query: 396 YFTDMESYNVMVSFLC-----------------------------------TSGRLREAY 420
+ +Y+V+++ LC GR+ E+
Sbjct: 421 LAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESR 480
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+++ M+ +G+ PDV YNSL+ C+ + A+ +M N TY I +
Sbjct: 481 MILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGY 540
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
S+ GE+E A R F+ ML GV P+ YT+L+EG C+E N+ AF VF
Sbjct: 541 SKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVF 588
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 105/197 (53%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M EKG P L T + + LC+ DE +E+ + + D+ +Y+++++ C R
Sbjct: 241 MGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKR 300
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
REA ++ EM GL P+ YN+L++ R+ + A ++ D+M A G NL +N
Sbjct: 301 SREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNT 360
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
L++ + G++E AL + M+EKGV PD+ TY+ L+EG C+ N+ AFE+ ++
Sbjct: 361 LLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK 420
Query: 536 VMLARSILSTFMISLCR 552
+ S + LCR
Sbjct: 421 LAPTVLTYSVIINGLCR 437
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 184/411 (44%), Gaps = 4/411 (0%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
SV + + ++ D Y +I L + +AF +F+E++ NSL++
Sbjct: 586 SVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS 645
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
G +D A ++ +EM +G+ + + + I C+ ++ + ++ D++ R +
Sbjct: 646 CKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGR--GLTP 703
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
V ++ G+CK K AF++L+E+ +R PD Y ++ F FE+ + L
Sbjct: 704 NCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILN-FCCKEEKFEKALDL 762
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG-SVSS 343
++ T + I G ++ EA L E ++ +F + +LI + +
Sbjct: 763 FQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKA 822
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
A + M E+ +PT T ++L E+ +++ + A D +Y
Sbjct: 823 GMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTY 882
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
VM+ C G + EA + E+ KG+ V+ Y++L++A C+++ KL +++
Sbjct: 883 YVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGE 942
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
SG L T +++ F G ++ A + +M++ G + T+ L++G
Sbjct: 943 SGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 993
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 144/316 (45%), Gaps = 1/316 (0%)
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
KG +VE +KV D + + PD Y + +G+V + + VL + + G +P
Sbjct: 192 KGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLV 251
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFM 356
Y I GL R + EA EL +V D + LI G R A + M
Sbjct: 252 TYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEM 311
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
I+ G P T + L ++ ++ + + A ++ +N +++ +C +G++
Sbjct: 312 IDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKM 371
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
+A ++QEM KG++PD Y+ L+E CR + A +L D+M + + TY+++
Sbjct: 372 EKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVI 431
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I+ G ++G + M+ G+ P+A YT+L+ +E ++ + + + +
Sbjct: 432 INGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGI 491
Query: 537 MLARSILSTFMISLCR 552
+ ++ +I C+
Sbjct: 492 LPDVFCYNSLIIGFCK 507
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 99/190 (52%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P+L + ++L +L K NK + +V+ + A+ D+ +Y M+S C G +++A V
Sbjct: 178 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV 237
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ EM KG P++ YN ++ CR LL A +L M G +L TY+ILI+ F
Sbjct: 238 LLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCM 297
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
A + M++ G+ P+ TY +L++G ++ +++ AF + ++ V + I
Sbjct: 298 EKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLII 357
Query: 543 LSTFMISLCR 552
+T + +C+
Sbjct: 358 WNTLLNGVCK 367
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 98/233 (42%), Gaps = 46/233 (19%)
Query: 329 IDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT----LSTLSNLSKNLCKRN----- 379
++ D++ ++I DP+ + FF + K T L LS L+ NLC N
Sbjct: 52 LNTDIIRSVILQNQVGDPKRLLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGPA 111
Query: 380 ---------KSDE-------LVEVYKVL--SANDYFTDM--ESYNVMVSFLCTSGRLREA 419
SD +V+ Y+ S N DM +SY M G L EA
Sbjct: 112 SDLIKCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKM-------GFLVEA 164
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK-----KLWDQMFASGCSGNLKTYN 474
V K P + NSL+ DLL+ K K++D M A ++ TY
Sbjct: 165 VNVFLGPKNFEFRPSLLSCNSLLG-----DLLKGNKVELFWKVFDGMCAHKVLPDVYTYT 219
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
+IS +VG ++ A R+ M EKG +P+ TY ++ GLC+ L A E+
Sbjct: 220 NMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIEL 272
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 73/404 (18%), Positives = 153/404 (37%), Gaps = 64/404 (15%)
Query: 16 AIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWAS 75
++IS S + K + LLE+ + + INP ++T++ L G
Sbjct: 640 SLISGSCKQGNVDKASQLLEE--------------MCIKGINPDIVTYNILIDGLCKAGE 685
Query: 76 -----------QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
+ T + ++Y +++ S+ A +L+++ + + D+ +Y
Sbjct: 686 IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNV 745
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
I+ + + +KA +F EM +G
Sbjct: 746 ILNFCCKEEKFEKALD-----------------------------------LFQEMLEKG 770
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
ST+ F I +C++ KL + +L+E+ +++ I V +I CK + E
Sbjct: 771 FA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQ--FIPNHVTYTSLIDHNCKAGMMGE 827
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A ++ E++ R P Y + + +G++ E + ++ G+ P Y I
Sbjct: 828 AKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMID 887
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV-FFNFMIEKGRVP 363
E + EA +L + I+ + +ALI ++ + ++ N + E G
Sbjct: 888 AYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRL 947
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
L T S +++ DE EV + + + ++ S +V
Sbjct: 948 GLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLV 991
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/532 (24%), Positives = 246/532 (46%), Gaps = 24/532 (4%)
Query: 10 ATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALG 69
T+ S +S SN R + + L Q R LS LV V+N L+ H +
Sbjct: 65 TTQTSNDALSISNAIRTG--FGAETQNFLRQF--RGRLSEPLVVEVMN--LVKHPEFCVE 118
Query: 70 FFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSL 129
FF WAS+Q ++H+P+ Y+++++ L + N D V + + D + R ++ L
Sbjct: 119 FFLWASRQIGYSHTPVVYNALIELLCCNAVNN--DRVSHKFLMQIRDDDRELLRKLLNFL 176
Query: 130 IQGKNTQKAFSVFNEVKFNCEDIG----PEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
IQ ++V E +D G P N+L+ V +D A + EMS+ G
Sbjct: 177 IQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGF 236
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
G F + C+ + G LS+L++ + +V ++ G C+ +EA
Sbjct: 237 RMDGCTLGCFAYSLCKAGRCGDALSLLEK-----EEFVPDTVFYNRMVSGLCEASLFQEA 291
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
+LD +R C P+ + YRI+ G + + +L G P + +
Sbjct: 292 MDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHA 351
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID--PRSAIV-----FFNFMIE 358
R A +L + ++ + N IGS+ S + P S ++ ++ M++
Sbjct: 352 YCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLD 411
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
G V +SN ++ LC K D+ E+ + + + D +Y+ ++ FLC + ++ +
Sbjct: 412 LGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEK 471
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A+ + +EMK+ G+ P V Y L+++ C+ L++ A+ +D+M C+ N+ TY LI
Sbjct: 472 AFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIH 531
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ + ++ A +LF ML +G P+ TYT+L++G C+ + A +++ +
Sbjct: 532 AYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYAR 583
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 155/365 (42%), Gaps = 20/365 (5%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L G D A ++ EM +G + I C+ +K+ + + +E++K N ++
Sbjct: 428 LCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKK--NGIV 485
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
++I FCK +++A DE+ C P+ + Y + + VF+ +
Sbjct: 486 PSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKL 545
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
+ G P Y I G C+A ++ + + + G + S
Sbjct: 546 FEMMLLEGSKPNVVTYTALIDGH------CKAGQIDKAC---------QIYARMQGDIES 590
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
D ++F P + T L LCK N+ +E E+ +S N + Y
Sbjct: 591 SDID---MYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVY 647
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+ ++ C +G+L A V +M +G P++ Y+SL+ + +E L K+ +M
Sbjct: 648 DALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLE 707
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
+ C+ N+ Y +I +VG+ E A RL M E G P+ TYT++++G + ++
Sbjct: 708 NSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQ 767
Query: 524 AFEVF 528
E++
Sbjct: 768 CLELY 772
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/482 (21%), Positives = 209/482 (43%), Gaps = 28/482 (5%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE- 144
+Y ++ L + ++ + +++K N I Y +I S + Q+A + F+E
Sbjct: 455 TYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEM 514
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ NC P + SL+ + +A K+F+ M G + + + + I C+
Sbjct: 515 LRDNCT---PNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKA 571
Query: 203 AKLGQVLSMLDEVRKR-------------ENSMINGSVIAV-LIIHGFCKGKRVEEAFKV 248
++ + + ++ +N ++I ++ G CK RVEEA ++
Sbjct: 572 GQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHEL 631
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
LD + + C+P+ I Y + + F G + + V K + G P Y I L
Sbjct: 632 LDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFK 691
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLST 367
E+R+ ++ ++ T + + +I + + A M E G P + T
Sbjct: 692 EKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVIT 751
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ + K K ++ +E+Y+ + + + +Y V+++ C++G L EA+ ++ EMK
Sbjct: 752 YTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMK 811
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
+ +S Y ++E RE + + L D++ + Y ILI F + G +E
Sbjct: 812 QTYWPRHISSYRKIIEGFNREFI--TSIGLLDELSENESVPVESLYRILIDNFIKAGRLE 869
Query: 488 GALRLFHNMLEKG--VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
GAL L + + YTSL+E L + + AFE++ +N +V+ LST
Sbjct: 870 GALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPE---LST 926
Query: 546 FM 547
F+
Sbjct: 927 FV 928
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 131/531 (24%), Positives = 237/531 (44%), Gaps = 51/531 (9%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLK------------------ 108
AL FF+WAS+Q F H+ +Y+ + ++L +R+I+ +LK
Sbjct: 7 ALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVI 66
Query: 109 -----------------QVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCED 151
+++ + D+++Y F+I +L + +NT KA F ++ CE
Sbjct: 67 QGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME--CEK 124
Query: 152 IGPEICNSLLAVLASDGY-----IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
N + + DG + A F +M +G + + V I FC+ K+
Sbjct: 125 ------NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVH 178
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ +L E++ E+ + V +IHGFC+ +V+ A+K+ ++ C P+ + Y
Sbjct: 179 RAYLLLKEMK--ESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNT 236
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ G + E +L + R+ G+ P Y + GL +I A ++ E +G
Sbjct: 237 LLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD 296
Query: 327 FTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
D + LI + A F M E P + T + L LCK ++ E
Sbjct: 297 CPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQ 356
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
+V + + + ++ +Y+ ++ LC +G++R+A V + M +G++P+V YNSL+
Sbjct: 357 QVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 416
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C + + A L ++M A+GC ++ TYN LI + G A RLF +M K PD
Sbjct: 417 CMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDV 476
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
TY+ L+ G C+ + A +F+ + V+ ST + C L+
Sbjct: 477 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLV 527
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 225/472 (47%), Gaps = 19/472 (4%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+ ++ +++ +LK++K + + + Y +I + A+ +F ++
Sbjct: 163 TYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQM 222
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
N P + N+LL+ L +G +D A ++ DEM RG++ + + C+
Sbjct: 223 VEN--GCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTG 280
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
K+ L + ++ N V+A +I G CK R++EA K+ +++R C+PD +
Sbjct: 281 KIDMALKVFED---NSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVV 337
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEV 321
+ + + + E + VL+ P Y I GL ++ +A+E+ +
Sbjct: 338 TFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRM 397
Query: 322 IVSGKFTIDDDVL--NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
IV G I+ +V+ N+LI G + SA++ M G +P + T + L LCK
Sbjct: 398 IVRG---IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKT 454
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
++ E ++ + A D+ +Y+ ++ C R+ A + +M ++ + PDV +
Sbjct: 455 GRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTF 514
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
++L+E C L+ A++L ++M AS CS ++ TY L+ F +VG + A R+ M +
Sbjct: 515 STLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAK 574
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAF----EVFNKSVNHDVMLARSILSTF 546
+G P+ TYT+L++ C+ A+ E+ V +V+ RS++ F
Sbjct: 575 RGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGF 626
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 198/447 (44%), Gaps = 3/447 (0%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++ +++ + +Q+ N + Y ++ L + +A+ + +E
Sbjct: 197 VTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDE 256
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ ++L+A L G ID ALK+F++ S+ + + I C+ +
Sbjct: 257 MRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGR 316
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + + +++R ENS V ++ G CKG R++EA +VL+ + R C P+ I Y
Sbjct: 317 LDEACKLFEKMR--ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITY 374
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + G V + + V K+ G+ P Y I G + + A L E + +
Sbjct: 375 SSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTA 434
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
D N LI G + A F M K P + T S L CK + D
Sbjct: 435 TGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDM 494
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
++ + D+ +++ +V C +G + +A +++EM PDV Y SL++
Sbjct: 495 ARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 554
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C+ + A+++ +M GC N+ TY LI F G+ A RL M+ GV P
Sbjct: 555 GFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQP 614
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNK 530
+ TY SL+ G C +L+ A ++ +
Sbjct: 615 NVITYRSLIGGFCGTGDLEEARKILER 641
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 175/423 (41%), Gaps = 42/423 (9%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N T + ++Y S++ L + Q+ V K++ V I + Y +I A
Sbjct: 366 NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 425
Query: 139 FSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+ E+ P+I N+L+ L G A ++F +M + I + I
Sbjct: 426 LLLMEEMTAT--GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLI 483
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
FC+ ++ ++ D++ K+ +++ V ++ G+C V++A ++L+E+ +
Sbjct: 484 GGFCKLERIDMARTLFDDMLKQ--AVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 541
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C PD Y + + F +G + E VLK+ K G P Y I C A
Sbjct: 542 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAF------CRA- 594
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
GK T+ +L ++G+ G P + T +L C
Sbjct: 595 --------GKPTVAYRLLEEMVGN-------------------GVQPNVITYRSLIGGFC 627
Query: 377 KRNKSDELVEVYKVLSANDYF-TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
+E ++ + L ++ DM +Y VM+ LC +GR+ A +++ +K+ G P
Sbjct: 628 GTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRH 687
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCS-GNLKTYNILISKFSEVGEIEGALRLFH 494
Y +L+ C+ L A ++ ++M S S N + Y +I + + G E A L
Sbjct: 688 DIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALAD 747
Query: 495 NML 497
+L
Sbjct: 748 ELL 750
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 228/469 (48%), Gaps = 5/469 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++ L +++ S+L ++ ++LD+ Y +I L++G+N A + +E+
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ +I P + + + V++ +G ++ A +FD M G+ + I +C +
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
Q +L E++KR N +I+ ++ G C ++ A+ ++ E+ C+P+ + Y
Sbjct: 399 RQGYELLVEMKKR-NIVISPYTYGT-VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 266 IVAEEFKLMGSVFEREV-VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + F L S F + VLK+ ++ G+AP Y I+GL +R+ EA+ +V
Sbjct: 457 TLIKTF-LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ A I G + + + SA + M E G +P + L CK+ K E
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
Y+ + D ++Y V+++ L + ++ +A + +EM+ KG+ PDV Y L+
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+ ++ A ++D+M G + N+ YN+L+ F GEIE A L M KG+ P
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+A TY ++++G C+ +L AF +F++ ++ + +T + CR
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 112/497 (22%), Positives = 198/497 (39%), Gaps = 78/497 (15%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ N SP +Y +++K + S ++ +++K++ + + +Y +I + +Q
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRF 468
Query: 136 QKAFSVFNEVKFNCEDIGPEI-C-NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
A V E+K + I P+I C NSL+ L+ +D A EM G++ + +G
Sbjct: 469 GDAMRVLKEMKE--QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
FI + E ++ + E+R E ++ V+ +I+ +CK +V EA +
Sbjct: 527 AFISGYIEASEFASADKYVKEMR--ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV 584
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+ D Y ++ V + E + ++ R G+AP Y I G
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF------- 637
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+LG + + A F+ M+E+G P + + L
Sbjct: 638 --SKLGNM-------------------------QKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
C+ + ++ E+ +S + +Y ++ C SG L EA+ + EMK KGL P
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 434 DVSFYNSLMEACCREDLLRPA--------------------------------------K 455
D Y +L++ CCR + + A
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLN 790
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L D F N TYNI+I + G +E A LFH M + P TYTSLL G
Sbjct: 791 RLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850
Query: 516 CQETNLQAAFEVFNKSV 532
+ F VF++++
Sbjct: 851 DKMGRRAEMFPVFDEAI 867
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 176/410 (42%), Gaps = 42/410 (10%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS--LLAVLASDGYIDNALK 175
D+ Y ++ L + A +F E++ + I P++ + L+ + G + A
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMR--GKGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+FDEM G+ + I + + + FC + ++ + +LDE+ + + +V II G
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK--GLHPNAVTYCTIIDG 706
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
+CK + EAF++ DE++++ PD Y + + + V ER + + K G A
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV-ERAITIFGTNKKGCASS 765
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNF 355
T + I V GK + +VLN L+ + V +N
Sbjct: 766 TAPFNALI---------------NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
MI+ LCK + E++ + + + +Y +++ GR
Sbjct: 811 MIDY---------------LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGR 855
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA-----SGCSGNL 470
E + V E G++PD Y+ ++ A +E + A L DQMFA GC ++
Sbjct: 856 RAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSI 915
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
T L+S F++VGE+E A ++ NM+ PD+ T L+ C +N
Sbjct: 916 STCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 123/565 (21%), Positives = 222/565 (39%), Gaps = 90/565 (15%)
Query: 36 QTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQP-------NFTHSPL--- 85
TL L ++P +V V+ + S L FFNW Q +F+ L
Sbjct: 49 DTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLC 108
Query: 86 SYHSILKSLSLSRQI--------NAIDSVLK--QVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ S K+LS+ ++ S+++ Q V K + D ++ + I
Sbjct: 109 NFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGK-SDDGVLFGILFDGYIAKGYI 167
Query: 136 QKAFSVFNEVKFNCEDIGPEI------CNSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
++A VF+ +G E+ C LL L +D ++ M R V F
Sbjct: 168 EEAVFVFSS------SMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDV 221
Query: 190 IGFGVFIWKFCE--NAKLGQVLSM------------LDEVRKRENSMINGSVIAV----- 230
+ + I C N +LG+ + +D K + SMI ++ +
Sbjct: 222 KTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYD 281
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I G CK KR+E+A +L E+ L
Sbjct: 282 VLIDGLCKIKRLEDAKSLLVEMD-----------------------------------SL 306
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSA 349
GV+ + Y I GL+ R AK L +VS I + + I +S A
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F+ MI G +P ++L + C+ + E+ + + +Y +V
Sbjct: 367 KALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
+C+SG L AY +++EM G P+V Y +L++ + A ++ +M G + +
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ YN LI S+ ++ A M+E G+ P+A TY + + G + + +A + +
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA-DKYV 545
Query: 530 KSVNHDVMLARSILSTFMIS-LCRR 553
K + +L +L T +I+ C++
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKK 570
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 228/469 (48%), Gaps = 5/469 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++ L +++ S+L ++ ++LD+ Y +I L++G+N A + +E+
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ +I P + + + V++ +G ++ A +FD M G+ + I +C +
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
Q +L E++KR N +I+ ++ G C ++ A+ ++ E+ C+P+ + Y
Sbjct: 399 RQGYELLVEMKKR-NIVISPYTYGT-VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 266 IVAEEFKLMGSVFEREV-VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + F L S F + VLK+ ++ G+AP Y I+GL +R+ EA+ +V
Sbjct: 457 TLIKTF-LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ A I G + + + SA + M E G +P + L CK+ K E
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
Y+ + D ++Y V+++ L + ++ +A + +EM+ KG+ PDV Y L+
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+ ++ A ++D+M G + N+ YN+L+ F GEIE A L M KG+ P
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+A TY ++++G C+ +L AF +F++ ++ + +T + CR
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 112/497 (22%), Positives = 198/497 (39%), Gaps = 78/497 (15%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ N SP +Y +++K + S ++ +++K++ + + +Y +I + +Q
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRF 468
Query: 136 QKAFSVFNEVKFNCEDIGPEI-C-NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
A V E+K + I P+I C NSL+ L+ +D A EM G++ + +G
Sbjct: 469 GDAMRVLKEMKE--QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
FI + E ++ + E+R E ++ V+ +I+ +CK +V EA +
Sbjct: 527 AFISGYIEASEFASADKYVKEMR--ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV 584
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+ D Y ++ V + E + ++ R G+AP Y I G
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF------- 637
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+LG + + A F+ M+E+G P + + L
Sbjct: 638 --SKLGNM-------------------------QKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
C+ + ++ E+ +S + +Y ++ C SG L EA+ + EMK KGL P
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 434 DVSFYNSLMEACCREDLLRPA--------------------------------------K 455
D Y +L++ CCR + + A
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLN 790
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L D F N TYNI+I + G +E A LFH M + P TYTSLL G
Sbjct: 791 RLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850
Query: 516 CQETNLQAAFEVFNKSV 532
+ F VF++++
Sbjct: 851 DKMGRRAEMFPVFDEAI 867
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 176/410 (42%), Gaps = 42/410 (10%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS--LLAVLASDGYIDNALK 175
D+ Y ++ L + A +F E++ + I P++ + L+ + G + A
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMR--GKGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+FDEM G+ + I + + + FC + ++ + +LDE+ + + +V II G
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK--GLHPNAVTYCTIIDG 706
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
+CK + EAF++ DE++++ PD Y + + + V ER + + K G A
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV-ERAITIFGTNKKGCASS 765
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNF 355
T + I V GK + +VLN L+ + V +N
Sbjct: 766 TAPFNALI---------------NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
MI+ LCK + E++ + + + +Y +++ GR
Sbjct: 811 MIDY---------------LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGR 855
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA-----SGCSGNL 470
E + V E G++PD Y+ ++ A +E + A L DQMFA GC ++
Sbjct: 856 RAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSI 915
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
T L+S F++VGE+E A ++ NM+ PD+ T L+ C +N
Sbjct: 916 STCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 123/565 (21%), Positives = 223/565 (39%), Gaps = 90/565 (15%)
Query: 36 QTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQP-------NFTHSPL--- 85
TL L ++P +V V+ + S L FFNW Q +F+ L
Sbjct: 49 DTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLC 108
Query: 86 SYHSILKSLSLSRQI--------NAIDSVLK--QVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ S K+LS+ ++ S+++ Q V K + D ++ + I +
Sbjct: 109 NFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGK-SDDGVLFGILFDGYIAKEYI 167
Query: 136 QKAFSVFNEVKFNCEDIGPEI------CNSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
++A VF+ +G E+ C LL L +D ++ M R V F
Sbjct: 168 EEAVFVFSS------SMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDV 221
Query: 190 IGFGVFIWKFCE--NAKLGQVLSM------------LDEVRKRENSMINGSVIAV----- 230
+ + I C N +LG+ + +D K + SMI ++ +
Sbjct: 222 KTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYD 281
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I G CK KR+E+A +L E+ L
Sbjct: 282 VLIDGLCKIKRLEDAKSLLVEMD-----------------------------------SL 306
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSA 349
GV+ + Y I GL+ R AK L +VS I + + I +S A
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F+ MI G +P ++L + C+ + E+ + + +Y +V
Sbjct: 367 KALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
+C+SG L AY +++EM G P+V Y +L++ + A ++ +M G + +
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ YN LI S+ ++ A M+E G+ P+A TY + + G + + +A + +
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA-DKYV 545
Query: 530 KSVNHDVMLARSILSTFMIS-LCRR 553
K + +L +L T +I+ C++
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKK 570
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 228/469 (48%), Gaps = 5/469 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++ L +++ S+L ++ ++LD+ Y +I L++G+N A + +E+
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ +I P + + + V++ +G ++ A +FD M G+ + I +C +
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
Q +L E++KR N +I+ ++ G C ++ A+ ++ E+ C+P+ + Y
Sbjct: 399 RQGYELLVEMKKR-NIVISPYTYGT-VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 266 IVAEEFKLMGSVFEREV-VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + F L S F + VLK+ ++ G+AP Y I+GL +R+ EA+ +V
Sbjct: 457 TLIKTF-LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ A I G + + + SA + M E G +P + L CK+ K E
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIE 575
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
Y+ + D ++Y V+++ L + ++ +A + +EM+ KG+ PDV Y L+
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+ ++ A ++D+M G + N+ YN+L+ F GEIE A L M KG+ P
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+A TY ++++G C+ +L AF +F++ ++ + +T + CR
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/497 (22%), Positives = 199/497 (40%), Gaps = 78/497 (15%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ N SP +Y +++K + S ++ +++K++ + + +Y +I + +Q
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRF 468
Query: 136 QKAFSVFNEVKFNCEDIGPEI-C-NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
A V E+K + I P+I C NSL+ L+ +D A EM G++ + +G
Sbjct: 469 GDAMRVLKEMKE--QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
FI + E ++ + E+R E ++ V+ +I+ +CK ++V EA +
Sbjct: 527 AFISGYIEASEFASADKYVKEMR--ECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMV 584
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+ D Y ++ V + E + ++ R G+AP Y I G
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF------- 637
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+LG + + A F+ M+E+G P + + L
Sbjct: 638 --SKLGNM-------------------------QKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
C+ + ++ E+ +S + +Y ++ C SG L EA+ + EMK KGL P
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 434 DVSFYNSLMEACCREDLLRPA--------------------------------------K 455
D Y +L++ CCR + + A
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLN 790
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L D F N TYNI+I + G +E A LFH M + P TYTSLL G
Sbjct: 791 RLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850
Query: 516 CQETNLQAAFEVFNKSV 532
+ F VF++++
Sbjct: 851 DKMGRRAEMFPVFDEAI 867
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 176/410 (42%), Gaps = 42/410 (10%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS--LLAVLASDGYIDNALK 175
D+ Y ++ L + A +F E++ + I P++ + L+ + G + A
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMR--GKGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+FDEM G+ + I + + + FC + ++ + +LDE+ + + +V II G
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK--GLHPNAVTYCTIIDG 706
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
+CK + EAF++ DE++++ PD Y + + + V ER + + K G A
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV-ERAITIFGTNKKGCASS 765
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNF 355
T + I V GK + +VLN L+ + V +N
Sbjct: 766 TAPFNALI---------------NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
MI+ LCK + E++ + + + +Y +++ GR
Sbjct: 811 MIDY---------------LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGR 855
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA-----SGCSGNL 470
E + V E G++PD Y+ ++ A +E + A L DQMFA GC ++
Sbjct: 856 RAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSI 915
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
T L+S F++VGE+E A ++ NM+ PD+ T L+ C +N
Sbjct: 916 STCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 123/565 (21%), Positives = 222/565 (39%), Gaps = 90/565 (15%)
Query: 36 QTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQP-------NFTHSPL--- 85
TL L ++P +V V+ + S L FFNW Q +F+ L
Sbjct: 49 DTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLC 108
Query: 86 SYHSILKSLSLSRQI--------NAIDSVLK--QVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ S K+LS+ ++ S+++ Q V K + D ++ + I
Sbjct: 109 NFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGK-SDDGVLFGILFDGYIAKGYI 167
Query: 136 QKAFSVFNEVKFNCEDIGPEI------CNSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
++A VF+ +G E+ C LL L +D ++ M R V F
Sbjct: 168 EEAVFVFSS------SMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDV 221
Query: 190 IGFGVFIWKFCE--NAKLGQVLSM------------LDEVRKRENSMINGSVIAV----- 230
+ + I C N +LG+ + +D K + SMI ++ +
Sbjct: 222 KTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYD 281
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I G CK KR+E+A +L E+ L
Sbjct: 282 VLIDGLCKIKRLEDAKSLLVEMD-----------------------------------SL 306
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSA 349
GV+ + Y I GL+ R AK L +VS I + + I +S A
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F+ MI G +P ++L + C+ + E+ + + +Y +V
Sbjct: 367 KALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
+C+SG L AY +++EM G P+V Y +L++ + A ++ +M G + +
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ YN LI S+ ++ A M+E G+ P+A TY + + G + + +A + +
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA-DKYV 545
Query: 530 KSVNHDVMLARSILSTFMIS-LCRR 553
K + +L +L T +I+ C++
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKK 570
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 138/527 (26%), Positives = 231/527 (43%), Gaps = 46/527 (8%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
S ++ F WA Q + H+ YH ++ L +++ ID +L Q+K I S++
Sbjct: 83 STSMAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFIC 142
Query: 125 IIPSLIQGKNTQKAFSVFNEVK--FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSH 182
I+ + +A + ++K + CE N +L +L S A +F EM
Sbjct: 143 IMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSY-NVVLDILVSANCPSVAANVFYEMLS 201
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR---ENSMINGSVIAVL-------- 231
+GV + FGV + C ++ S+L ++ K NS++ ++I L
Sbjct: 202 KGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNE 261
Query: 232 ----------------------IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+I+G C+ R+ E K++D + R P+ I Y ++
Sbjct: 262 ALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMN 321
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL--GLIVERRICEAKE-LGEVIVSGK 326
+G V E +V+L K P ND IL G + R+ EA L + ++
Sbjct: 322 GLCRVGKVDEAQVLLNK------VPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNG 375
Query: 327 FTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
D N LI G SA+ N M G P L T + L CK+N+ +E
Sbjct: 376 CRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAG 435
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
V +SA + ++ YNV++ LC +G++ +A ++ EM KG PD+ +N+L+
Sbjct: 436 YVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGL 495
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+ D A L+ M G N TYN LI F G I+ AL+L ++ML +G D
Sbjct: 496 CKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDE 555
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
TY L++ C+ + A +F++ V D++ + + + LCR
Sbjct: 556 ITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCR 602
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/490 (20%), Positives = 207/490 (42%), Gaps = 51/490 (10%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
++ ++K+L + +++ S+L+ + + +S VY+ +I +L + +A + E+
Sbjct: 210 TFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEM 269
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ N ++ L I K+ D M RG + I +GV + C K+
Sbjct: 270 FLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKV 329
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVL-DELRIRECKPDFIAY 264
+ +L++V + V ++I+G+ K R++EA L D++ C+PD +
Sbjct: 330 DEAQVLLNKVPTPND------VHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTF 383
Query: 265 RIVAEEF---KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ LMGS + ++ G P Y + G + ++ EA +
Sbjct: 384 NTLIHGLCKKGLMGSAVD---MVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNE 440
Query: 322 IVSGKFTIDDDVLNALIGSVSSID--PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+ + F ++ N L+ ++ P+ A+ M +KG P + T + L LCK +
Sbjct: 441 MSAKGFELNIMGYNVLLRALCKNGKVPK-ALDMLGEMSDKGCKPDIFTFNTLIFGLCKVD 499
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ ++ + +Y+ + + + +YN ++ G ++EA ++ +M +G D YN
Sbjct: 500 RKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYN 559
Query: 440 SLMEACCREDLLRPAKKLWDQM-----------------------------------FAS 464
L++A C+ A L+D+M
Sbjct: 560 GLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHR 619
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G + ++ TYN LI+ ++G I A LF+ + +G+ PDA TY +L+ C+ A
Sbjct: 620 GLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDA 679
Query: 525 FEVFNKSVNH 534
+ + + V +
Sbjct: 680 YLLLLRGVEN 689
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 149/344 (43%), Gaps = 3/344 (0%)
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
++D+M G F I C+ +G + M++++ N + ++ G
Sbjct: 367 LYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSA--NGCTPNLITYTTLLDG 424
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
FCK ++EEA VL+E+ + + + + Y ++ G V + +L + G P
Sbjct: 425 FCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPD 484
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFN 354
+ I GL R +A L ++ + N LI + + + A+ N
Sbjct: 485 IFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVN 544
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+ +G T + L K CK +++ + ++ + D S N++++ LC G
Sbjct: 545 DMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVG 604
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
++ A ++++M +GL PDV YNSL+ C+ +R A L++++ A G + TYN
Sbjct: 605 KVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYN 664
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
LI G + A L +E P+ T+ L+ +E
Sbjct: 665 TLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKE 708
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 68/163 (41%), Gaps = 1/163 (0%)
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
S Y + Y+V++ L + + ++ ++K +G+ S + +M+ R +L
Sbjct: 94 SQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLP 153
Query: 452 RPAKK-LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
A + L D C K+YN+++ A +F+ ML KGV P T+
Sbjct: 154 GQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGV 213
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+++ LC + A + H + + T + +L +R
Sbjct: 214 VMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKR 256
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 211/464 (45%), Gaps = 13/464 (2%)
Query: 84 PLSYH--SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSV 141
P ++H +IL SL ++ + S+ KQ + N IT D +I + AFSV
Sbjct: 55 PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114
Query: 142 FNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
F + N+L+ L G I AL D++ +G + + +G I C+
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ V +L RK E + V+ II+ CK K + +A V E+ ++ PD
Sbjct: 175 TGETKAVARLL---RKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPD 231
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ Y + F +MG + E +L + + + P + I L E ++ EAK L
Sbjct: 232 VVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLA 291
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
V++ D N+LI +D + A F M ++G P + +N+ LCK
Sbjct: 292 VMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTK 351
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
DE + +++ + + D+ +YN ++ LC + L A + + MK +G+ PDV Y
Sbjct: 352 MVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYT 411
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
L++ C+ L AK+++ ++ A G N+ Y +LI++ + G + AL L M +K
Sbjct: 412 ILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDK 471
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
G PDA T+ ++ L ++ A ++ + M+AR +L
Sbjct: 472 GCMPDAVTFDIIIRALFEKDENDKAEKILRE------MIARGLL 509
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 137/309 (44%), Gaps = 13/309 (4%)
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD I+ F + V K G P I GL I +A
Sbjct: 90 PDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYF 149
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRV-PTLSTLSNLSKNLCK 377
+ +V+ F +D LI + A+ +E V P + + + +LCK
Sbjct: 150 HDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCK 209
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ +VY + D+ +Y ++ C G L+EA+ ++ EMK K ++P+V
Sbjct: 210 NKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCT 269
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
+N L++A +E ++ AK L M + ++ TYN LI + V E++ A +F++M
Sbjct: 270 FNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMA 329
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSILSTF------- 546
++GV PD YT+++ GLC+ + A +F +K++ D++ S++
Sbjct: 330 QRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLE 389
Query: 547 -MISLCRRV 554
I+LC+R+
Sbjct: 390 RAIALCKRM 398
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 1/224 (0%)
Query: 334 LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
LN LI G + + A+ F + ++ +G + L LCK ++ + + + L
Sbjct: 130 LNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLE 189
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ D+ YN +++ LC + L +A V EM KG+ PDV Y +L+ C L+
Sbjct: 190 GHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLK 249
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A L ++M + N+ T+NILI S+ G+++ A L M++ + PD TY SL+
Sbjct: 250 EAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLI 309
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+G ++ A VF V + + LC+ ++
Sbjct: 310 DGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMV 353
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+N ++S L + + ++ + G+ PD+ + L+ C + + A ++ +
Sbjct: 60 FNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 119
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G N T N LI GEI+ AL ++ +G D +Y +L+ GLC+ +
Sbjct: 120 KRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETK 179
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
A + K H V + +T + SLC+ L+
Sbjct: 180 AVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLL 213
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 56/120 (46%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P +N+++ + L+ Q +G + +L T +ILI+ F I A +
Sbjct: 55 PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
F N+L++G P+A T +L++GLC ++ A ++ V L + T + LC+
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 121/499 (24%), Positives = 223/499 (44%), Gaps = 19/499 (3%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINA 102
R+ L+ SLV V+N + + L + FF WA +Q ++H+P + +L L + +NA
Sbjct: 100 FRNQLNDSLVVEVMNN--VKNPELCVKFFLWAGRQIGYSHTPQVFDKLLDLLGCN--VNA 155
Query: 103 IDSV----LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN 158
D V L ++K + L + F++ + A +K N
Sbjct: 156 DDRVPLKFLMEIKDDDHELLRRLLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYN 215
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L+ V +D A + EM F + C+ K + ++DE
Sbjct: 216 ALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAE-- 273
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+ +V ++ G C+ EEA +L +R C P+ + YRI+ G +
Sbjct: 274 --DFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLG 331
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
+ +L G P + I R A +L + ++ V N I
Sbjct: 332 RCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFI 391
Query: 339 GSVSSID--PRSAIV-----FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
GSV S + P S I+ ++ M++ G V +SN ++ LC K D+ ++ +
Sbjct: 392 GSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEM 451
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+ D +Y+ ++ FLC + ++ +A+ + +EMKR G+ P V Y L+++ C+ L+
Sbjct: 452 MGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLI 511
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
+ A+K +D+M GC+ N+ TY LI + + ++ A LF ML +G P+ TYT+L
Sbjct: 512 QQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTAL 571
Query: 512 LEGLCQETNLQAAFEVFNK 530
++G C+ ++ A +++ +
Sbjct: 572 IDGHCKAGQIEKACQIYAR 590
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 175/404 (43%), Gaps = 26/404 (6%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS--LLAVLASDGYIDNALK 175
D S Y +I L +KAFS+F E+K N I P + L+ G I A K
Sbjct: 459 DDSTYSKVIGFLCDASKVEKAFSLFEEMKRN--GIVPSVYTYTILIDSFCKAGLIQQARK 516
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
FDEM H+G + + + I + + AK V L E+ E N V +I G
Sbjct: 517 WFDEMLHKGCTPNVVTYTALIHAYLK-AKQMPVADELFEMMLLEGCKPN-VVTYTALIDG 574
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
CK ++E+A ++ +R D Y FKL + E P
Sbjct: 575 HCKAGQIEKACQIYARMRGDIESSDMDKY------FKLDHNNCE-------------GPN 615
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFN 354
Y + GL R+ EA EL + +++ + V +A+I I + A F
Sbjct: 616 VITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFT 675
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M E+G P L T S+ L K N+ D +++V + N ++ Y MV LC G
Sbjct: 676 KMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIG 735
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ EAY ++ +M+ KG +P+V Y ++++ + + +L+ M + GC+ N TY
Sbjct: 736 KTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYR 795
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+LI+ G ++ A +L M + ++ ++EG QE
Sbjct: 796 VLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQE 839
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 164/390 (42%), Gaps = 31/390 (7%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L G D A K+ EM +G + I C+ +K+ + S+ +E+++ N ++
Sbjct: 435 LCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKR--NGIV 492
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV------AEEFKLMGSV 277
++I FCK +++A K DE+ + C P+ + Y + A++ + +
Sbjct: 493 PSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADEL 552
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI---CE--AKELGEVIVSGK---FTI 329
FE ++ G P Y I G +I C+ A+ G++ S F +
Sbjct: 553 FEMMLLE------GCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKL 606
Query: 330 DDD--------VLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
D + AL+ + + + A + M+ G P + CK K
Sbjct: 607 DHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGK 666
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+ EV+ +S Y ++ +Y+ + L RL V+ +M P+V Y
Sbjct: 667 LQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTE 726
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+++ C+ A KL +M GC+ N+ TY +I F + G+IE L LF +M KG
Sbjct: 727 MVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKG 786
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
AP+ TY L+ C L A+++ ++
Sbjct: 787 CAPNFITYRVLINHCCSNGLLDEAYKLLDE 816
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 174/404 (43%), Gaps = 26/404 (6%)
Query: 155 EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
EI NSL+ A K+F +M G + + + +FI C N + +LD
Sbjct: 350 EIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSS-DILDL 408
Query: 215 VRKRENSMIN-GSVIAVLIIHGF----CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
V K + M++ G V+ + + F C + ++AFK++ E+ + PD Y V
Sbjct: 409 VEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIG 468
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
V + + ++ ++ G+ P Y I I +A++ + ++ T
Sbjct: 469 FLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTP 528
Query: 330 DDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
+ ALI + + + A F M+ +G P + T + L CK + ++ ++Y
Sbjct: 529 NVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIY 588
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+ + +DM+ Y + C P+V Y +L++ C+
Sbjct: 589 ARMRGDIESSDMDKYFKLDHNNCEG-------------------PNVITYGALVDGLCKA 629
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
+ ++ A +L D M A GC N Y+ +I F ++G+++ A +F M E+G +P+ TY
Sbjct: 630 NRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTY 689
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+S ++ L ++ L +V +K + + I + + LC+
Sbjct: 690 SSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCK 733
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 98/266 (36%), Gaps = 78/266 (29%)
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
TLS + +LCK K E ++ + A D+ D YN MVS LC + EA ++ M
Sbjct: 248 TLSCFAYSLCKGGKCREAFDL--IDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRM 305
Query: 427 KR-----------------------------------KGLDPDVSFYNSLMEACCREDLL 451
+ +G P+ +NSL+ A C+
Sbjct: 306 RSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDY 365
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISK-------------------FSEV--------- 483
A KL+ +M GC YNI I +SE+
Sbjct: 366 SYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNK 425
Query: 484 -------------GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
G+ + A ++ M+ KG PD +TY+ ++ LC + ++ AF +F +
Sbjct: 426 VNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEE 485
Query: 531 SVNHDVMLARSILSTFMISLCRRVLI 556
+ ++ + + + S C+ LI
Sbjct: 486 MKRNGIVPSVYTYTILIDSFCKAGLI 511
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/503 (24%), Positives = 217/503 (43%), Gaps = 51/503 (10%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNK------------- 114
L +WAS+QPNF S + Y +L+ L ++ VL+++K
Sbjct: 89 LDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIE 148
Query: 115 -----------------------ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCED 151
+ LD+ Y F++ L+ G N K + N +
Sbjct: 149 SYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDG-NKLKLVEIVNS-RMVSRG 206
Query: 152 IGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
I P++ N L+ L I A+ M +EM G+ F + F E + L
Sbjct: 207 IKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGAL 266
Query: 210 SMLDEVRKRENSMING----SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
R RE + G +V +++HG+CK R+EE +DE+ +PD +
Sbjct: 267 ------RIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFN 320
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ +G V +L + G P Y I GL + EA E+ ++
Sbjct: 321 SLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILR 380
Query: 326 KFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
F+ + N LI ++ + A + KG +P + T ++L + LC N
Sbjct: 381 DFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLA 440
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+E+++ + D +YN+++ LC+ GRL EA +++EM+ G +V YN+L++
Sbjct: 441 MELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDG 500
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C+ + A++++D+M G S N+ TYN LI + +E A +L ML +G+ PD
Sbjct: 501 FCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPD 560
Query: 505 ATTYTSLLEGLCQETNLQAAFEV 527
TY SLL C+ +++ A ++
Sbjct: 561 KFTYNSLLTYFCRAGDIKKAADI 583
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 204/444 (45%), Gaps = 9/444 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y+ +L L ++ ++ V ++ I D + + +I +L + + A + E
Sbjct: 177 FTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEE 236
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + +L+ +G ++ AL++ ++M G S + V + +C+ +
Sbjct: 237 MGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGR 296
Query: 205 LGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ +VLS +DE+ R + S +++G C+ V+ A ++LD + PD
Sbjct: 297 IEEVLSFIDEMSNEGFRPDRFTFNS-----LVNGLCRIGHVKHALEILDVMLQEGFDPDI 351
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
Y + +G V E +L + +P T Y I L E ++ EA EL V
Sbjct: 352 FTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARV 411
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ S D N+LI G + + R A+ F M KG P T + L +LC R +
Sbjct: 412 LTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGR 471
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+E + + K + ++ ++ +YN ++ C + R+ EA + EM+ +G+ +V YN+
Sbjct: 472 LEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNT 531
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L++ C+ + A +L DQM G + TYN L++ F G+I+ A + M G
Sbjct: 532 LIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNG 591
Query: 501 VAPDATTYTSLLEGLCQETNLQAA 524
PD+ TY +L+ GL + ++ A
Sbjct: 592 CEPDSVTYGTLILGLSKAGRVELA 615
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 160/399 (40%), Gaps = 52/399 (13%)
Query: 57 NPYLLTHHSLALGFFNWASQQP-----------NFTHSPLSYHSILKSLSLSRQINAIDS 105
+P + T++SL G + +F+ + ++Y++++ +L Q+
Sbjct: 348 DPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATE 407
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLA 165
+ + + I D + +I L N + A +F E+K N L+ L
Sbjct: 408 LARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLC 467
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMING 225
S G ++ AL + EM G + + + I FC+N ++ + + DE+ E I+
Sbjct: 468 SRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEM---ELQGISR 524
Query: 226 SVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+V+ +I G CK +RVEEA +++D++ + KPD Y + F G + + ++
Sbjct: 525 NVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIV 584
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV--- 341
+ G P + Y ILGL R+ A L + + N +I ++
Sbjct: 585 QTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFRE 644
Query: 342 --------------SSIDPRSAIVF-----------------FNFMIE---KGRVPTLST 367
DP A+ + +F++E KG +P S+
Sbjct: 645 KRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSS 704
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
L++ LC + D L+++ + F+D E +M
Sbjct: 705 FLMLAEGLCALSMEDTLIKLVNRVMKQANFSDSEVSMIM 743
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 124/544 (22%), Positives = 236/544 (43%), Gaps = 39/544 (7%)
Query: 44 RDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAI 103
R LSP +V +V+ L AL FF WA + + H + +L L + Q +
Sbjct: 88 RGQLSPEIVGKVLQR--LIDPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQA 145
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK----------------- 146
+ + + D+ Y +I I+ A+ +F+E+
Sbjct: 146 HDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRG 205
Query: 147 ----FNCEDI------GPEIC-------NSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
C D + C N+++ L+ +D+A+++ +EM G +
Sbjct: 206 LCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNV 265
Query: 190 IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVL 249
+ + FC+ ++ L +L+++ R V +I+G CK +V+EA +V+
Sbjct: 266 FSYNTVLHGFCKANRVENALWLLEQMVTR--GCPPDVVSYTTVINGLCKLDQVDEACRVM 323
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
D++ R C+P+ I Y + + F +G + +++K + G P Y +
Sbjct: 324 DKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRR 383
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTL 368
+ A ++ ++++ D + +I G + R A MI +G P ++ L
Sbjct: 384 NDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACL 443
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
S L LCK D E+ ++ D D+ +Y++++ LC + RL EA + M +
Sbjct: 444 STLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVK 503
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
PDV YNS+++ C+ + A L+D+M A+G ++ TY+I+I F + ++
Sbjct: 504 NRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDS 563
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
A ++ M E PD TY++L+ GLC+ + AF+VF + + +T +
Sbjct: 564 AFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLID 623
Query: 549 SLCR 552
LC+
Sbjct: 624 GLCK 627
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/509 (23%), Positives = 226/509 (44%), Gaps = 44/509 (8%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKS-LSLSRQINAIDS 105
L+ ++V +V+ + + ALGFF+WA+ Q + H + + +L++ L L R +A+
Sbjct: 809 LTTTVVGKVLQG--VRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDAL-- 864
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLA 165
QV NK+ +++ F I LI G L
Sbjct: 865 ---QVYRNKLCCSPNMFTFTI--LIHG-------------------------------LC 888
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMING 225
G I A ++ EM GV + I V I C KL L + E+ + S
Sbjct: 889 RAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEM-EESGSCPPD 947
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
I+ K +V++A ++++++ + C P+ + Y + G + E +L+
Sbjct: 948 VFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQ 1007
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI- 344
+ + G +P Y I G RI EA L E +V G + L+ +
Sbjct: 1008 RMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCG 1067
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
AI M+EKG VP L T ++L CK+++ + ++ + ++ SYN
Sbjct: 1068 KAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYN 1127
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
+++ LC + ++ E ++++M PD+ +N++++A C+ + A +L++ + S
Sbjct: 1128 TVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQES 1187
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK-GVAPDATTYTSLLEGLCQETNLQA 523
GC+ NL TYN L+ + + A L M K G +PD TY ++++GLC+ +
Sbjct: 1188 GCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDR 1247
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCR 552
A+++F + ++ + S + SLC+
Sbjct: 1248 AYKLFLQMLSDGLAPDDVTYSIVISSLCK 1276
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/471 (22%), Positives = 213/471 (45%), Gaps = 11/471 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++++ LS S +++ +L+++ N + Y ++ + + A + +
Sbjct: 231 VTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQ 290
Query: 145 -VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
V C P++ + +++ L +D A ++ D+M RG + + I +G + FC
Sbjct: 291 MVTRGCP---PDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFC- 346
Query: 202 NAKLGQVLSMLDEVRK-RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
++G + ++ VRK E ++ I+H FC+ +E A +VL + C PD
Sbjct: 347 --RVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPD 404
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
I Y + F G + E +L++ + G P I L I A+EL
Sbjct: 405 AINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLR 464
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+ + D + LI ++ A + + M++ P + T +++ LCK
Sbjct: 465 MSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSR 524
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ ++ ++ + A D+ +Y++++ C L A+ +++ MK PDV Y+
Sbjct: 525 RINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYS 584
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+L+ C+ + A ++ +M GC+ NL TYN LI ++ ++E A + M ++
Sbjct: 585 ALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQ 644
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
PD+ TYT L+ GLC + L+ A+ V + + + R T + +L
Sbjct: 645 SCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRAL 695
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 208/451 (46%), Gaps = 15/451 (3%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F + SY+++L + ++ +L+Q+ D Y +I L + +A
Sbjct: 260 GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEA 319
Query: 139 FSVFNE-VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
V ++ ++ C+ P + +L+ G +D A+++ +M+ RG + I +
Sbjct: 320 CRVMDKMIQRGCQ---PNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNI 376
Query: 196 IWKFC---ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
+ FC + + QVL M+ + ++ IN S I I GFCK ++ EA +L+++
Sbjct: 377 MHVFCRRNDMERAHQVLQMMIQTGCPPDA-INYSTI----ISGFCKAGKLREAHDLLEQM 431
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
R C+PD + + ++ + +L+ + AP Y I L +R+
Sbjct: 432 IRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRL 491
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
EA+ +V+V + D N+++ G S A + F+ M G +P + T S +
Sbjct: 492 PEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIV 551
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
+ CK N D ++ + + D+ +Y+ +++ LC +G + +A+ V QEM G
Sbjct: 552 IHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGC 611
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
P++ YN+L++ C+ + + A ++ + M C+ + TY LI+ +E A R
Sbjct: 612 APNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWR 671
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
+ M +KG PD TY +LL L + NL+
Sbjct: 672 VLREMKDKGCLPDRMTYGTLLRALQKTNNLE 702
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/458 (22%), Positives = 196/458 (42%), Gaps = 20/458 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y S+L L + +++ ++L+++ + + + Y II + +A+ + E
Sbjct: 984 VTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEE 1043
Query: 145 -VKFNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
V C+ P + LL G ++A+ + + M +G + + + FC+
Sbjct: 1044 MVDGGCQ---PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCK 1100
Query: 202 NAKLGQVLSMLDEVRKRENSMIN-GSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRE 256
++ + +L +SMI G V V+ +I G CK +V E +L+++
Sbjct: 1101 KDEVERACQLL-------SSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 1153
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C PD + + + + V + ++ G P Y + GL RR +A+
Sbjct: 1154 CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAE 1213
Query: 317 EL-GEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
L E+ + D N +I G S A F M+ G P T S + +
Sbjct: 1214 YLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISS 1273
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK DE V +++ N + +Y ++ C +G L +A ++Q + KG PD
Sbjct: 1274 LCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPD 1333
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V ++ ++ + LR A +L + M +G + TYN L+ F + E A+ LF
Sbjct: 1334 VVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFE 1393
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
M + G PD TYT+L+ L + + + +KS+
Sbjct: 1394 VMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSM 1431
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 173/428 (40%), Gaps = 53/428 (12%)
Query: 51 LVARVINPYLLTHHSLALGFFNWAS-----------QQPNFTHSPLSYHSILKSLSLSRQ 99
++ R P ++T+ +L GF + + + ++Y++I+
Sbjct: 326 MIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRND 385
Query: 100 INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEIC- 157
+ VL+ + D+ Y II + ++A + + ++ C P++
Sbjct: 386 MERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCR---PDVAC 442
Query: 158 -NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
++L+ L ID+A ++ + + + I C+ +L + S LD +
Sbjct: 443 LSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMV 502
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
K N V ++ G CK +R+ +AF + D +R PD + Y IV F +
Sbjct: 503 K--NRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNN 560
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ +L++ ++ P Y I GL C+A T+D
Sbjct: 561 LDSAFKMLERMKEAKCVPDVVTYSALINGL------CKAG-----------TVD------ 597
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
A F M+ G P L T + L LCK NK ++ E+ +++
Sbjct: 598 -----------KAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSC 646
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D +Y +++ LC + RL EA+ V++EMK KG PD Y +L+ A + + L ++
Sbjct: 647 TPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQ 706
Query: 457 LWDQMFAS 464
L +M A+
Sbjct: 707 LLKEMEAT 714
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 134/303 (44%), Gaps = 12/303 (3%)
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D + Y + F G + + + + G+ ++ + GL C+A +
Sbjct: 160 DTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGL------CDAGQCS 213
Query: 320 EVIV-----SGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+ ++ S D N +I +S D AI M++ G P + + + +
Sbjct: 214 DAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLH 273
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
CK N+ + + + + + D+ SY +++ LC ++ EA V+ +M ++G P
Sbjct: 274 GFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQP 333
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+V Y +L++ CR L A +L +M G N TYN ++ F ++E A ++
Sbjct: 334 NVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVL 393
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
M++ G PDA Y++++ G C+ L+ A ++ + + + LST + +LC+
Sbjct: 394 QMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKA 453
Query: 554 VLI 556
I
Sbjct: 454 AAI 456
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/458 (19%), Positives = 179/458 (39%), Gaps = 91/458 (19%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NSLL + ++ A ++ M +G + + + I C+ K+ + + +L+++
Sbjct: 1092 NSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLS 1151
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
N+ + V II CK RV+ A+++ + ++ C P+ + Y +
Sbjct: 1152 --NNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRF 1209
Query: 278 FEREVVLKK-KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ E +L++ RK G +P Y I GL +R+ A +L ++S DD +
Sbjct: 1210 DQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSI 1269
Query: 337 LIGSVSS---IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
+I S+ +D + ++ M++ G P T L CK D+ +E+ ++L +
Sbjct: 1270 VISSLCKWRFMDEANNVL--ELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLS 1327
Query: 394 NDYFTDMESYNVMVSFLCTSGRLR-----------------------------------E 418
+ D+ ++++ + +L GRLR +
Sbjct: 1328 KGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTED 1387
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLM----EACCREDLLRPAKK------------LWDQMF 462
A + + M++ G +PD + Y +L+ + +DLL K L ++
Sbjct: 1388 AVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLE 1447
Query: 463 AS-GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK---------------------- 499
AS +++ ++ F + G + A ++F M ++
Sbjct: 1448 ASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAF 1507
Query: 500 ---------GVAPDATTYTSLLEGLCQETNLQAAFEVF 528
GV PDA T+ SLL C L AA + F
Sbjct: 1508 GLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEF 1545
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 88/448 (19%), Positives = 188/448 (41%), Gaps = 39/448 (8%)
Query: 58 PYLLTHHSLALGF-----FNWA-------SQQPNFTHSPLSYHSILKSLSLSRQINAIDS 105
P L+T++SL G F+ A +++ + ++Y++++ L S++++
Sbjct: 1191 PNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYK 1250
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLA 165
+ Q+ + + D Y +I SL + + +A +V + N D G +L+
Sbjct: 1251 LFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFC 1310
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMING 225
G +D AL++ + +G + F +FI + +L Q +L+ + + ++
Sbjct: 1311 KTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRA--GLVPD 1368
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
+V ++ GFC E+A + + +R C+PD Y L+G + +++
Sbjct: 1369 TVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTT------LVGHLVDKK---S 1419
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID 345
K L ++ F L + ++ + E+ + G +D + G S
Sbjct: 1420 YKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVD------MFGKCGS-- 1471
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
P+ A F M ++ V S + + ++ +++V+ D ++
Sbjct: 1472 PQDARKVFEGMDQRNVV----LWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLS 1527
Query: 406 MVSFLCTSGRLREAYGVIQEMKRK-GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
+++ C +G L A + R GL+P V ++ +++ R L+ A+ D M
Sbjct: 1528 LLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAE---DLMLGM 1584
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRL 492
C + T+N L+S + G+ E ALR+
Sbjct: 1585 PCKPSAATWNCLLSAYKICGDFERALRV 1612
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 210/464 (45%), Gaps = 13/464 (2%)
Query: 98 RQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK-FNCEDIGPEI 156
R I+A+ + ++ + I D+ +Y ++ L + K +A ++ +E++ CE P +
Sbjct: 59 RSIDAL-RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCE---PNV 114
Query: 157 C--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
NSL+ L + D A ++F+ M S + + + KL + +++ E
Sbjct: 115 VTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQE 174
Query: 215 VRKRENSMINGS-----VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+ R + ++ + ++I G CK RV +A ++L+ ++ R C PD I Y I+ +
Sbjct: 175 MLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVD 234
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
V VL++ G P Y + GL RR+ +A L + T
Sbjct: 235 GLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTP 294
Query: 330 DDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
+ LI + + + A MI+KG P L + L LCK ++ DE + +
Sbjct: 295 NVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALL 354
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+ + D+ +Y+ ++ LC S RL EA ++ +K +G PDV Y++L++ C+
Sbjct: 355 RRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKA 414
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
+ A L++ M GC ++ TY+ LI + G ++ A L M+ G P TY
Sbjct: 415 GKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTY 474
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
SL++GLC +L A E+ + + + + + +CR
Sbjct: 475 NSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCR 518
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/479 (22%), Positives = 218/479 (45%), Gaps = 29/479 (6%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PN ++Y+S++ L + + + + + +K + + Y ++ L + +
Sbjct: 111 EPNV----VTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLE 166
Query: 137 KAFSVFNEV----KFNCED-IGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
+A ++F E+ + +D P + + L+ L + A+++ + M RG
Sbjct: 167 RAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDV 226
Query: 190 IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI-----IHGFCKGKRVEE 244
I + + + C+ +K+ +L E M++ + L+ +HG C+ +RV +
Sbjct: 227 ITYTILVDGLCKESKVAAAWEVLRE-------MLDAGCVPNLVTYNSLLHGLCRARRVSD 279
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A ++ ++ R C P+ + Y + + +G V + +L G P Y I
Sbjct: 280 ALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLIN 339
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVP 363
GL ++ E+ L VSG D +++I G S A ++ +G P
Sbjct: 340 GLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPP 399
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ S L LCK K DE ++Y+V++ + D+ +Y+ ++ LC +GR+ EA+ ++
Sbjct: 400 DVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLL 459
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
M R G P YNSL++ C + L A +L ++M S C+ + TYNILI +
Sbjct: 460 ARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRM 519
Query: 484 GEIEGALRLFHNMLEK-----GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
++ A+ L + G A D Y+SL++GLC+ + A + F + +++ V+
Sbjct: 520 ERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVI 578
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 161/369 (43%), Gaps = 10/369 (2%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ + FC ++ Q DE+R + +++ + ++I G CK KR +A +
Sbjct: 12 YAALLRGFCRGGEIDQAQRCFDEMRSK--NLVPNVFLCSILIDGLCKAKRSIDALRCFRA 69
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
++ D + Y + + + +L + R G P Y I GL
Sbjct: 70 MQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNE 129
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGR-------VP 363
A+EL E + S + + N L+ G + A+ F M+++ P
Sbjct: 130 PDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSP 189
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ T S L LCK N+ + VE+ + + A D+ +Y ++V LC ++ A+ V+
Sbjct: 190 NVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVL 249
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+EM G P++ YNSL+ CR + A L M GC+ N+ TY LI +V
Sbjct: 250 REMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKV 309
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
G ++ A + +M++KG PD Y L+ GLC+ + + + ++V+ +
Sbjct: 310 GRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTY 369
Query: 544 STFMISLCR 552
S+ + LCR
Sbjct: 370 SSVIYGLCR 378
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 159/392 (40%), Gaps = 31/392 (7%)
Query: 50 SLVARVINPYLLTHHSLALGFFN-------W--------ASQQPNFTHSPLSYHSILKSL 94
S+ AR +P ++T+ L G W A PN ++Y+S+L L
Sbjct: 216 SMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNL----VTYNSLLHGL 271
Query: 95 SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV--KFNCEDI 152
+R+++ ++++ + T + Y +I L + + A ++ ++ K D+
Sbjct: 272 CRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDL 331
Query: 153 GPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML 212
I N L+ L +D ++ + G++ + + I+ C + +L + +L
Sbjct: 332 --MIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLL 389
Query: 213 DEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
V+ R ++ +I G CK +V+EAF + + + C D + Y + +
Sbjct: 390 LYVKSR--GCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLC 447
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
G V E ++L + ++G P T Y I GL + EA EL E +
Sbjct: 448 KAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAV 507
Query: 333 VLNALIGSVSSIDP-RSAIVFFN-----FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
N LI + ++ SA+V + G S+L LCK + E ++
Sbjct: 508 TYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALD 567
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
++ + N D +Y++++ L S L E
Sbjct: 568 YFQEMIDNGVIPDHITYSILLEGLKKSKDLHE 599
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 3/177 (1%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + T + L + C+ + D+ + + + + ++ ++++ LC + R +A
Sbjct: 7 PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ M+ G+ D Y +L+ +E L A + +M GC N+ TYN LI +
Sbjct: 67 FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN---HDV 536
E + A LF +M +P TY +LL+GL + L+ A +F + ++ HD+
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDM 183
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
C ++ TY L+ F GEI+ A R F M K + P+ + L++GLC+ A
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 526 EVFNKSVNHDVMLARSILSTFMIS 549
F +++ ++A +++ T ++S
Sbjct: 65 RCF-RAMQGSGIVADTVIYTALLS 87
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 135/580 (23%), Positives = 241/580 (41%), Gaps = 83/580 (14%)
Query: 44 RDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLS----------------- 86
R +L P++V+RV+ L A+ FF WA + F HS +
Sbjct: 88 RGTLQPAVVSRVLQ--RLKDPQTAIVFFVWAGDR-GFKHSTFTRNCFLQTLLENGSSDRI 144
Query: 87 ------------------YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPS 128
YH ++KSL QI+ ++L + KV + SVY + +
Sbjct: 145 PAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRA 204
Query: 129 LIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVE 186
+ + A +F + P+ N+++ D AL+ EM+ R V
Sbjct: 205 FCKTGRLKDALEIFRNIP------SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVA 258
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE--------NSMING-----------SV 227
+ + I C+ +K + ML E+ R NS+++G S+
Sbjct: 259 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 318
Query: 228 IAVL--------------IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
+AV+ +I G CK + V+ A ++DE PD + Y I+A+
Sbjct: 319 LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCK 378
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
G + E ++K+ G P Y I GL + +A EL E +VS F D
Sbjct: 379 RGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVT 438
Query: 334 LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
++ G A+ M+++G P++ T + L + LC+ + DE ++K +
Sbjct: 439 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 498
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ D D +Y +V+ C S R +EA V+ ++ P + YN+LM+ C+E L
Sbjct: 499 SKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGRLD 555
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
+++ M GC N+KTYNI++ + G+++ A +M G PD +Y ++
Sbjct: 556 EIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIII 615
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+GL + + + A +V ++ + + +T M C+
Sbjct: 616 DGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCK 655
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 208/476 (43%), Gaps = 11/476 (2%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
T ++++SI+ L + + S+L + Y +I L + +N +A
Sbjct: 293 TPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKD 352
Query: 141 VFNEVKFNCEDIGPEICN-SLLA-VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ +E F P++ S+LA L G ID A ++ EMS +G + + + I
Sbjct: 353 LVDE--FVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDG 410
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C+ +K + +L+ + + + V +I+ G CK R+++A K+++ + R C
Sbjct: 411 LCKASKTEKAYELLESLV--SSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCT 468
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
P I Y + E G V E + K+ Y + G R EA+++
Sbjct: 469 PSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKV 528
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ I + DV NAL+ I F M +G VP + T + + LCK
Sbjct: 529 VDGIRGTPYI---DVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCK 585
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
K DE + + + D+ SYN+++ L + + +EA V+ +M + G+ PD
Sbjct: 586 HGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVT 645
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
YN+LM C+E+ A + M +G + TYN LIS S+ + A L H ML
Sbjct: 646 YNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEML 705
Query: 498 EKG-VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
G V TTY ++++ LC+E L+ A + + H V + F+ LC+
Sbjct: 706 RNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCK 761
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 221/473 (46%), Gaps = 13/473 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y+ ++ L + + + +L ++ +T D+ + I+ L + ++A S+
Sbjct: 262 FTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAV 321
Query: 145 V-KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ + NC P C N+L++ L +D A + DE G + + + C+
Sbjct: 322 MAERNCR---PSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCK 378
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
++ + ++ E+ + V +I G CK + E+A+++L+ L PD
Sbjct: 379 RGRIDEAFELVKEMSGK--GCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDV 436
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ Y I+ + G + + +++ K G P Y + GL R+ EA + +
Sbjct: 437 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 496
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+VS T D +L+ G S + A + + +G P + + L CK +
Sbjct: 497 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RG-TPYIDVYNALMDGYCKEGR 553
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
DE+ V++ ++ ++++YN+++ LC G++ EA+ ++ M G PDV YN
Sbjct: 554 LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNI 613
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+++ + + A+++ DQM +G + TYN L+++F + + A+ + NM++ G
Sbjct: 614 IIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAG 673
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSV-NHDVMLARSILSTFMISLCR 552
V PD TY +L+ GL Q L A+E+ ++ + N V+ A + +T + LC+
Sbjct: 674 VDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCK 726
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 205/460 (44%), Gaps = 15/460 (3%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
T S ++Y ++++ L + +++ + K++ T D+ Y ++ + T++A
Sbjct: 468 TPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQK 527
Query: 141 VFNEVKFNCEDIGP--EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
V + ++ P ++ N+L+ +G +D +F++M+ RG + + + +
Sbjct: 528 VVDGIRGT-----PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDG 582
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C++ K+ + L+ + + V +II G K + +EA +VLD++
Sbjct: 583 LCKHGKVDEAFPFLESMH--SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIP 640
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD + Y + +F + +LK K GV P Y I GL R+ +A EL
Sbjct: 641 PDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYEL 700
Query: 319 -GEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
E++ +G N +I + + A++ + M G T + LC
Sbjct: 701 MHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLC 760
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM-KRKGLDPDV 435
K + DE +LS D D SY ++ LC + +L A + +EM KGL
Sbjct: 761 KEGRLDE---ASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITS 817
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
+N L++A + L A L M GCS ++ TYN++I+ ++ +++ A LF
Sbjct: 818 HTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDE 877
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
M +G+ + +YT L+ GLC + + A +V + + D
Sbjct: 878 MAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSD 917
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 107/507 (21%), Positives = 212/507 (41%), Gaps = 42/507 (8%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
T + ++Y++++ L + + +L+ + + D Y I+ L + KA
Sbjct: 398 TPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALK 457
Query: 141 -VFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
V +K C P + +L+ L G +D A +F EM + + + +
Sbjct: 458 MVEGMLKRGCT---PSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVN 514
Query: 198 KFCENAKLGQVLSMLDEVRKR--------------------------ENSMINGSVIAV- 230
+C++++ + ++D +R E+ G V +
Sbjct: 515 GYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIK 574
Query: 231 ---LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+++ G CK +V+EAF L+ + C PD ++Y I+ + E VL +
Sbjct: 575 TYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQM 634
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP- 346
+ G+ P Y + E R +A + + ++ D+ N LI +S +
Sbjct: 635 IQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRL 694
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSN-LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
A + M+ G V + T N + LCK + + + ++ + + +YN+
Sbjct: 695 GDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNI 754
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA-S 464
+ LC GRL EA ++ EM L +VS Y +++ C+ + L A KL +M A
Sbjct: 755 FIDRLCKEGRLDEASSLLSEMDT--LRDEVS-YTTVIIGLCKAEQLDRASKLAREMVAVK 811
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G T+N+LI F++ ++ AL L M+++G +P TY ++ LC+ + A
Sbjct: 812 GLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKA 871
Query: 525 FEVFNKSVNHDVMLARSILSTFMISLC 551
+E+F++ ++ + + + LC
Sbjct: 872 WELFDEMAVRGIVASSVSYTVLIYGLC 898
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 96/202 (47%), Gaps = 8/202 (3%)
Query: 356 MIEKGRV----PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
M++K +V P +S + L++ CK + + +E+++ + + D +YN ++ C
Sbjct: 182 MLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAI----AYNAIIHGHC 237
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
A ++EM + + PDV YN L++ C+ A ++ +M G + +
Sbjct: 238 RKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTV 297
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
T+N ++ + G+ E A L M E+ P TY +L+ GLC++ N+ A ++ ++
Sbjct: 298 TFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEF 357
Query: 532 VNHDVMLARSILSTFMISLCRR 553
V+ + S LC+R
Sbjct: 358 VSSGFVPDVVTYSILADGLCKR 379
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 10/187 (5%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+ + L +++ S+L ++ + D Y +I L + + +A + E
Sbjct: 750 VTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYTTVIIGLCKAEQLDRASKLARE 806
Query: 145 ---VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
VK C I N L+ +D AL + M RG S I + + I C+
Sbjct: 807 MVAVKGLC--ITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCK 864
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
K+ + + DE+ R ++ SV ++I+G C R +EA +VL+E+ +C+ D
Sbjct: 865 LDKVDKAWELFDEMAVR--GIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDD 922
Query: 262 IAYRIVA 268
+ + VA
Sbjct: 923 LKWEDVA 929
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/501 (23%), Positives = 226/501 (45%), Gaps = 21/501 (4%)
Query: 44 RDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAI 103
R L+ S+V V+ + L FF WA +Q ++H+ Y ++ +L +
Sbjct: 100 RGFLTDSVVVAVLGA-VRDAPELCARFFLWAERQVGYSHTGACYDALADALGFDGRARDA 158
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PE--ICNS 159
+ +L+++ + + ++ +G +A +K D G P N+
Sbjct: 159 ERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLK----DFGYRPSKVTYNA 214
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ VL+S G +D ++ EMS G G F C+ + L M++ RE
Sbjct: 215 LVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIE----RE 270
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+ ++ +V+ +I G + +EA L +R C P+ + YR + F +
Sbjct: 271 DFKLD-TVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGW 329
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+ ++ G P + + + E+ A +L + + V N IG
Sbjct: 330 CKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIG 389
Query: 340 SVSSID--PRSAIV-----FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
S+ + P ++ + M+ V ++N ++ LC K D+ ++ K +
Sbjct: 390 SICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMM 449
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ D +Y+ +++FLC + ++ +A+ + QEMK G+ PDV Y L+++ C+ L+
Sbjct: 450 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 509
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A+ L+++M + GCS + TY LI + + ++ A +FH M++ G P+ TY +L+
Sbjct: 510 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALV 569
Query: 513 EGLCQETNLQAAFEVFNKSVN 533
+GLC+ N+ AFEV+ K +
Sbjct: 570 DGLCKAGNISKAFEVYAKLIG 590
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/456 (21%), Positives = 192/456 (42%), Gaps = 25/456 (5%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++L +Q+ ++ + + S++ ++ S K+ A+ + N
Sbjct: 312 VTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNR 371
Query: 145 VKFNCEDIGPEICNSLLAV------LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ G + N + L S +D A K++ EM + + F
Sbjct: 372 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARC 431
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C K + ++ E+ ++ + + +I C +VE+AF + E+++
Sbjct: 432 LCGVGKFDKAFQLIKEMMRK--GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 489
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD Y I+ + F G + + + + ++ R +G +P Y I + +++ +A ++
Sbjct: 490 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 549
Query: 319 GEVIVSGKFTIDDDVLNALI------GSVS-----------SIDPRSAIVFFNFMIEKGR 361
+V +D AL+ G++S + D + +F
Sbjct: 550 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 609
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P + T L LCK +K D E+ + ++ + Y+ ++ C +G++ A
Sbjct: 610 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 669
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
V +M + G P V Y SL++ ++ L A K+ QM C+ N+ TY +I
Sbjct: 670 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 729
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+GE E AL+L M EKG +P+ TYT+L++GL Q
Sbjct: 730 RIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQ 765
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/498 (23%), Positives = 227/498 (45%), Gaps = 16/498 (3%)
Query: 44 RDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAI 103
RD L+ ++V V+ + L + FF WA +Q ++H+ Y+++ + L +
Sbjct: 99 RDFLNDAVVVAVLRS--VRTPELCVRFFLWAERQVGYSHTGACYNALAEVLHFDDRARTT 156
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK-FNCEDIGPEICNSLLA 162
+ +L+++ + + + I+ + KA +K F G N+L+
Sbjct: 157 ERLLREIGEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATY-NALVQ 215
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
VLA+ G +D ++ EMS G G F C+ + L M++ RE+
Sbjct: 216 VLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIE----REDFK 271
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
++ +V+ +I G + +EA L +R C P+ + YR + F + +
Sbjct: 272 LD-TVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKR 330
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
++ G P + + + R A +L + V N IGS+
Sbjct: 331 IISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSIC 390
Query: 343 SID--PRSAIV-----FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
S + P ++ + M+ V +N ++ LC K D+ ++ K++
Sbjct: 391 SGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKG 450
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ D +Y+ +++FLC + ++ +A+ + QEMK G+ PDV Y L+++ C+ L+ A+
Sbjct: 451 FVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQAR 510
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+D+M + GCS ++ TY L+ + + ++ A +FH M++ G AP+ TY++L++GL
Sbjct: 511 SWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGL 570
Query: 516 CQETNLQAAFEVFNKSVN 533
C+ Q A EV+ K +
Sbjct: 571 CKAGESQKACEVYAKMIG 588
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 157/371 (42%), Gaps = 20/371 (5%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L G D A ++ M +G T + I CE K+ + + E++ +I
Sbjct: 430 LCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSV--GVI 487
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
++I FCK +E+A DE+ C P + Y + + V + +
Sbjct: 488 PDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDI 547
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
+ G AP T Y + GL C+A E + +V +IG+ +
Sbjct: 548 FHRMVDAGCAPNTITYSALVDGL------CKAGESQKAC---------EVYAKMIGTSDN 592
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ + +F P + T L LCK +K + E+ V+S+N + Y
Sbjct: 593 V---GSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIY 649
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+ ++ C G+L A V M + G P V Y SL++A ++ L A K+ QM
Sbjct: 650 DALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLE 709
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
S C+ N+ TY +I +GE + AL+L M ++G P+ TYTSL++GL + +
Sbjct: 710 SSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDM 769
Query: 524 AFEVFNKSVNH 534
+ ++F + +
Sbjct: 770 SLQLFTQMITQ 780
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 115/512 (22%), Positives = 226/512 (44%), Gaps = 34/512 (6%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWASQ------QPNFTHSPLSYHSILKSLSLSRQI 100
L+ S V +N +G F+ A Q + F +Y ++ L + ++
Sbjct: 412 LASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKV 471
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEICN 158
+ +++K + D Y +I S + ++A S F+E+ E +G P +
Sbjct: 472 EKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEM----ESVGCSPSVVT 527
Query: 159 --SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC---ENAKLGQVLSML- 212
+LL + A +F M G +TI + + C E+ K +V + +
Sbjct: 528 YTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMI 587
Query: 213 ---DEVR-------KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
D V + +S+ V +I G CK +V +A ++LD + C+P+ I
Sbjct: 588 GTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHI 647
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + F +G + + V + K G P + Y I + +RR+ A ++ +
Sbjct: 648 IYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQM 707
Query: 323 VSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
+ T + A+I + I + + A+ + M ++G P + T ++L L K K
Sbjct: 708 LESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKV 767
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
D ++++ + + +Y V+++ C +G L EA+ ++ EMK+ V Y S+
Sbjct: 768 DMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSV 827
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
++ ++ + + L +++ + G Y +LI FS+ G +E AL L M+E
Sbjct: 828 VQGFSKKFI--ASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSS 885
Query: 502 APDAT---TYTSLLEGLCQETNLQAAFEVFNK 530
+ + T TYTSL++ LC + L+ AFE++++
Sbjct: 886 SLNITSKDTYTSLIQALCLASQLEKAFELYSE 917
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 145/373 (38%), Gaps = 21/373 (5%)
Query: 200 CENAKLGQVLSMLDEVRKRENSM---------INGSVIAVLIIHGFCKGKRVEEAFKVLD 250
C NA L +VL D R E + + G ++ V I+ C+ +A + L
Sbjct: 139 CYNA-LAEVLHFDDRARTTERLLREIGEDDREVLGRLLNV-IVRKCCRHGAWAKALEELG 196
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
L+ +P Y + + G + V K+ +LG F L E
Sbjct: 197 RLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEG 256
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
R +A + I F +D + +I G + + AI F + M +P + T
Sbjct: 257 RWSDALVM---IEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 313
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
L K+ + + ++ + +N +V C + AY ++ M
Sbjct: 314 TLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGC 373
Query: 430 GLDPDVSFYNSLMEACCR------EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
G P YN + + C DLL A+K++++M AS C N +
Sbjct: 374 GCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGM 433
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
G+ + A ++ M+ KG PD +TY+ ++ LC+ ++ AF +F + + V+
Sbjct: 434 GKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTY 493
Query: 544 STFMISLCRRVLI 556
+ + S C+ LI
Sbjct: 494 TILIDSFCKVGLI 506
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/432 (18%), Positives = 165/432 (38%), Gaps = 65/432 (15%)
Query: 72 NWASQQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSL 129
+W + + SP ++Y ++L + ++Q+ + ++ ++ Y ++ L
Sbjct: 511 SWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGL 570
Query: 130 IQGKNTQKAFSVFNEVKFNCEDIG--------------PEIC--NSLLAVLASDGYIDNA 173
+ +QKA V+ ++ +++G P + +L+ L + +A
Sbjct: 571 CKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDA 630
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV-------------------LSMLDE 214
++ D MS G E + I + I FC+ KL S++D
Sbjct: 631 QELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDA 690
Query: 215 VRKR--------------ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ K E+S V +I G C+ ++A K+L + R C P+
Sbjct: 691 MFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPN 750
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ Y + + G V + + G AP YR I C A L E
Sbjct: 751 VVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLI------NHCCAAGLLDE 804
Query: 321 ---VIVSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
++ K T + V + +++ + G V L +
Sbjct: 805 AHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSF 864
Query: 376 CKRNKSDELVEVYKVL---SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
K + ++ +E++K + S++ T ++Y ++ LC + +L +A+ + E+ RKG+
Sbjct: 865 SKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVV 924
Query: 433 PDVSFYNSLMEA 444
P++S + L++
Sbjct: 925 PELSAFICLIKG 936
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 218/458 (47%), Gaps = 13/458 (2%)
Query: 82 HSPLSYHS--ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
+SP +Y +L+SL S +I ++Q+ V + D S + I L + A
Sbjct: 12 YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQ 70
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+VF+ ++ + N+LL+ L + G + +A +++ M G + + + F
Sbjct: 71 TVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGF 130
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
C+ KL + L + D KR + V +I+GFCK +++EA ++L + P
Sbjct: 131 CKVGKLDEALKIFDGAVKR--GFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVP 188
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE-RRICEAKEL 318
D + Y + G V E +++ K G +P Y I GL E RR+ A++L
Sbjct: 189 DVVTYNSLVNGLCKNGRVDEARMLIVDK---GFSPNVITYSTLISGLCRELRRLESARQL 245
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
E +V D NALI ++ S A+ F ++ +G P + T + L L K
Sbjct: 246 LEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLK 305
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
++ +E E++ L + D +Y V + LC +GR+ +A ++++M KG PDV
Sbjct: 306 EDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVS 365
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
+N+++ C+E + A+ L M A GCS N ++N LI G+ + A+ F ML
Sbjct: 366 HNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEML 425
Query: 498 EKGVAPDATTYTSLLEGLC---QETNLQAAFEVFNKSV 532
++GV P TY L++GLC QE ++ A +F+ +
Sbjct: 426 KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI 463
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 197/446 (44%), Gaps = 59/446 (13%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+LL G +D ALK+FD RG + + I FC+ KL + +L +
Sbjct: 124 NTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVS 183
Query: 218 RE--------NSMING---------------------SVIAV-LIIHGFCKG-KRVEEAF 246
NS++NG +VI +I G C+ +R+E A
Sbjct: 184 ESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESAR 243
Query: 247 KVLDELRIRECKPDFIAYRI----------VAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
++L+++ + CKPD ++Y V+E KL GSV + G P
Sbjct: 244 QLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQ----------GYEPEV 293
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---GSVSSIDPRSAIVFF 353
Y I GL+ E R+ EA EL +V K ++ D + + G + A++
Sbjct: 294 PTYNILIDGLLKEDRVNEAFELFSGLV--KHGLEPDAITYTVFIDGLCKAGRVEDALLML 351
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
M EKG VP + + + + LCK + DE + + A + S+N ++ C +
Sbjct: 352 KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRA 411
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR---EDLLRPAKKLWDQMFASGCSGNL 470
G+ ++A +EM ++G+ P V YN L++ C+ E ++ A L+D M G ++
Sbjct: 412 GKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDV 471
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TY+ LI + G+++ A RL M KG P+ TY SL+ GLC + A E+F
Sbjct: 472 VTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVA 531
Query: 531 SVNHDVMLARSILSTFMISLCRRVLI 556
V + T + +LC++ ++
Sbjct: 532 MVEKGCVPDTITYGTIISALCKQEMV 557
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 120/519 (23%), Positives = 233/519 (44%), Gaps = 47/519 (9%)
Query: 42 GLRDSLSPSLVARVI----NPYLLTHHSLALGF------------FNWASQQPNFTHSPL 85
G R S + +L R+I +P ++T+++L GF F+ A ++ F +
Sbjct: 98 GGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKR-GFVPDVV 156
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y++++ + +++ +L+++ + D Y ++ L + +A + +
Sbjct: 157 TYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK 216
Query: 146 KFNCEDIGPEIC--NSLLAVLASD-GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
F+ P + ++L++ L + +++A ++ ++M G + + + I
Sbjct: 217 GFS-----PNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLARE 271
Query: 203 AKLGQVLSMLDEVRKR----ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
+ + L + V ++ E N ++I G K RV EAF++ L +
Sbjct: 272 QGVSEALKLFGSVLRQGYEPEVPTYN------ILIDGLLKEDRVNEAFELFSGLVKHGLE 325
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD I Y + + G V + ++LK + G P + I GL E+R+ EA
Sbjct: 326 PDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEA--- 382
Query: 319 GEVIVSG----KFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
EV++SG + + N LI G + + A+ F M+++G PT+ T + L
Sbjct: 383 -EVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVD 441
Query: 374 NLCK---RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
LCK + E + ++ + D+ +Y+ ++ L +G+L +A ++ M+ KG
Sbjct: 442 GLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKG 501
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
P+V YNSL+ C D + A +L+ M GC + TY +IS + ++ AL
Sbjct: 502 CIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKAL 561
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
LF LE GV P + Y SL++GLC + A ++
Sbjct: 562 ALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 86/156 (55%)
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ ++N+ +S LC + R+ +A V M++ G P+ YN+L+ C + A+
Sbjct: 47 LCDISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQA 106
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L+++M +G S ++ TYN L+ F +VG+++ AL++F +++G PD TY +L+ G C
Sbjct: 107 LYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFC 166
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ L A + + V+ ++ ++ + LC+
Sbjct: 167 KADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCK 202
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
Y D + +++ L SG++ +A+ ++++ KGL D+S +N + CR + A+
Sbjct: 12 YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQ 70
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
++D M G N TYN L+S G + A L+ M++ G +PD TY +LL G
Sbjct: 71 TVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGF 130
Query: 516 CQETNLQAAFEVFNKSVNH----DVMLARSILSTF 546
C+ L A ++F+ +V DV+ ++++ F
Sbjct: 131 CKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGF 165
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/514 (23%), Positives = 217/514 (42%), Gaps = 68/514 (13%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
LAL FF + +F H+PL+Y +++K L R I+ I +L+ +K+ I+ + ++ +
Sbjct: 55 LALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIV 114
Query: 126 IPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
I + + ++A F + +F C+ +I N +L L S+ +++ M G
Sbjct: 115 INAYRRAGLAEQALKTFYRIGEFGCKP-SVKIYNHVLDALLSENKFQMINGIYNNMKRDG 173
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEV--------------------------RKR 218
+E + + + + C+N ++ +L E+ R
Sbjct: 174 IELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAR 233
Query: 219 ENSMINGSVIAVL--IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E SM S + V +I+GFC+ ++EE F++ +E+ + PD I Y V MG+
Sbjct: 234 ELSMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGN 293
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
V VL K G +P + + + G + R+CEA +L
Sbjct: 294 VEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDL------------------ 335
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+N MI++G P + L LC K E V V + + N
Sbjct: 336 ----------------WNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGV 379
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
F + +Y+ ++ +G L A + +M G P+V Y +++ CR + A
Sbjct: 380 FPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALH 439
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L + M C N T+N I G+ E A+++ + M + G AP+ TTY +L+GL
Sbjct: 440 LIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLF 499
Query: 517 QETNLQAAFEVFNK----SVNHDVMLARSILSTF 546
+ A ++ + + +++ +ILS F
Sbjct: 500 NAKRTREALQIVGEIEEMEIKSNLVTYNTILSGF 533
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 146/330 (44%), Gaps = 18/330 (5%)
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE------EFKLMGSVFEREVV 283
V++I+ + + E+A K + CKP Y V + +F+++ ++
Sbjct: 112 VIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIY----- 166
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV-LNALIGSVS 342
++ G+ Y + L R+ A++L +S K I D V ++ S+
Sbjct: 167 -NNMKRDGIELNVYTYNMLLKALCKNDRVDAARKL-LAEMSYKGCIPDAVSYTTVVSSMC 224
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
+ + I K VP + L N C+ +K +E+ E++ ++ D+ +
Sbjct: 225 RLGKVEEARELSMRI-KSFVPVYNALIN---GFCREHKMEEVFELFNEMAVEGIDPDVIT 280
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y+ +++ L G + A V+ +M +G P+V + SLM+ L A LW++M
Sbjct: 281 YSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMI 340
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G N YN LI G++ A+ + M GV P+ TTY++L++G + +L
Sbjct: 341 QEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLV 400
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A E++NK + + + + + + LCR
Sbjct: 401 GASEIWNKMITNGCLPNVVVYTCMVDVLCR 430
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/490 (23%), Positives = 217/490 (44%), Gaps = 35/490 (7%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQI---------------------NAIDS 105
AL FF W +++P F H+ S+ ++L+ L+ R A+D+
Sbjct: 73 ALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVVSMISCSGTAEDMREAVDA 132
Query: 106 V--LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLL 161
+ +++ ++ L Y + SL++ T+ +++++ E + P+ N+++
Sbjct: 133 IQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQ--EGLLPDTVTYNTMI 190
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ---VLSMLDEVRKR 218
+G + A + F + G+E T + +C L + +L M+ + R
Sbjct: 191 MAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCR 250
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
N ++I G C+ + V EA +L + C P+ Y ++ G +
Sbjct: 251 RNE-----YSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIH 305
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
+ V+L + + GV P Y I G R+ +A + ++ DD N+LI
Sbjct: 306 DARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLI 365
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
+ P A N I +G PT+ T +N+ CK K D+ + V ++ ++
Sbjct: 366 HGLCGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKL 425
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D+++Y V++S L RL+EA + E+ GL P+V Y S+++A C+ + A +++
Sbjct: 426 DLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVF 485
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
GC N TY+ LI + ++ A+ L M E G+ P TYT+L++G C++
Sbjct: 486 KLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKK 545
Query: 519 TNLQAAFEVF 528
AF +F
Sbjct: 546 HEFDNAFRLF 555
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 155/364 (42%), Gaps = 4/364 (1%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
ID+AL++ M + +GV I + +L + L+E+ N + VI
Sbjct: 408 IDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFA--NGLSPNVVIY 465
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
II +CK +V A +V C+P+ Y + + + ++ K ++
Sbjct: 466 TSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQE 525
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSA 349
G+ P Y I G + A L E++ T D+ N L ++ A
Sbjct: 526 DGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCK--SGRA 583
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
++F+++KG V T T ++L K ++ + + + D +Y+V++
Sbjct: 584 EEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQA 643
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC +L EA ++ +M +G+ ++ Y ++ +E AK ++++M +SG +
Sbjct: 644 LCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPS 703
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
TY + IS + ++G IE A L M GVAPD TY + G + AF
Sbjct: 704 AITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLK 763
Query: 530 KSVN 533
+ ++
Sbjct: 764 RMID 767
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 116/512 (22%), Positives = 200/512 (39%), Gaps = 66/512 (12%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y SI+ + ++ A V K + ++ Y +I LIQ + KA ++ +++
Sbjct: 465 YTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQ 524
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA--- 203
+ G +L+ DNA ++F+ M G+ + V C++
Sbjct: 525 EDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAE 584
Query: 204 -------KLGQVL------SMLDEVRKRENSMINGSVIAVLIIHG--------------F 236
K G VL S++D K N+ ++I ++ G
Sbjct: 585 EAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQAL 644
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
CK K++ EA +LD++ +R K + +AY I+ E G + + + G P
Sbjct: 645 CKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSA 704
Query: 297 NDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNF 355
Y FI RI EA L GE+ +G + DV+ + VF N
Sbjct: 705 ITYTVFISSYCKIGRIEEAGHLIGEMERNG---VAPDVV-------------TYNVFING 748
Query: 356 MIEKGRVP-TLSTLSNLSKNLCKRNKSDE---LVEVYKVLSANDYFTDMESYNVMVSFLC 411
G + STL + C+ N L K+ AN ++ D M +++
Sbjct: 749 CGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSG---MWNWI- 804
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+L + +++ M + GL+P Y+S++ C+ L A L D M S N +
Sbjct: 805 ---KLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEE 861
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF--- 528
Y +LI ++ E A NM+E G P +Y L+ GLC E + A +F
Sbjct: 862 IYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDL 921
Query: 529 -NKSVNHD----VMLARSILSTFMISLCRRVL 555
NH+ +L +L + +C ++L
Sbjct: 922 LEMDYNHNEVAWKILNDGLLKAGHVDICSQLL 953
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/476 (18%), Positives = 189/476 (39%), Gaps = 40/476 (8%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
Q+ T ++Y ++++ + + + + ++ N +T D Y + +L +
Sbjct: 524 QEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRA 583
Query: 136 QKAFS-------VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFS 188
++A+S V +V + SL+ + G + A + ++M + G +
Sbjct: 584 EEAYSFLVKKGVVLTKVTYT----------SLVDGFSKAGNTEFAAALIEKMVNEGCKAD 633
Query: 189 TIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGFCKGKRVEEAFK 247
+ + V + C+ KL + LS+LD++ R + G+++A +II K + + A
Sbjct: 634 SHTYSVLLQALCKQKKLNEALSILDQMTLRG---VKGNIVAYTIIISEMIKEGKHDHAKS 690
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL- 306
+ +E+ KP I Y + + +G + E ++ + + GVAP Y FI G
Sbjct: 691 MFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCG 750
Query: 307 ----------IVERRI---CEAKELGEVIVSGKFTIDDDVLNALI----GSVSSIDPRSA 349
++R I CE ++ F + + NA G + I +
Sbjct: 751 HMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHF-LKMSLANAHYVDTSGMWNWIKLDTV 809
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
M++ G PT T S++ CK + +E + + D + E Y +++
Sbjct: 810 WQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKC 869
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
C +A + M G P + Y+ L+ C E AK L+ + + N
Sbjct: 870 CCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHN 929
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+ IL + G ++ +L M + D+ TY+ + + + + + ++
Sbjct: 930 EVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVTNNIHEASGMYESY 985
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 195/434 (44%), Gaps = 9/434 (2%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDE 179
Y +I L + +A +F +K + P + N+LL L G ++ A+ +F E
Sbjct: 13 YNSLIDGLCKNNEPDRAQELFEHMKS--VECSPSMVTYNTLLDGLFRTGKLERAMALFQE 70
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M R I F + + C + G++ + L+ RK ++ + ++I G CK
Sbjct: 71 MLDRR-SHDVISFNILVTGLC---RAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKA 126
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
RV +A ++L+ ++ R C PD I Y I+ + V VL++ G P Y
Sbjct: 127 NRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTY 186
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIE 358
+ GL RR+ +A L + T + LI + + + A MI+
Sbjct: 187 NSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMID 246
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
KG P L + L LCK ++ DE + + + + D+ +Y+ ++ LC S RL E
Sbjct: 247 KGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDE 306
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A ++ +K +G PDV Y++L++ C+ + A L++ M GC ++ TY+ LI
Sbjct: 307 ACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLID 366
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+ G ++ A L M+ G P TY SL++GLC +L A E+ + +
Sbjct: 367 GLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAP 426
Query: 539 ARSILSTFMISLCR 552
+ + + +CR
Sbjct: 427 SAVTYNILIHGMCR 440
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 225/487 (46%), Gaps = 35/487 (7%)
Query: 58 PYLLTHHSLALGFFNWASQQPN-----FTH------SP--LSYHSILKSLSLSRQINAID 104
P ++T++SL G + +P+ F H SP ++Y+++L L + ++
Sbjct: 8 PNVVTYNSLIDGL--CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAM 65
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLA 162
++ +++ +++ + D + ++ L + + A F ++ C P + + L+
Sbjct: 66 ALFQEM-LDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCS---PNVITYSVLID 121
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
L + A+++ + M RG I + + + C+ +K+ +L E M
Sbjct: 122 GLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLRE-------M 174
Query: 223 INGSVIAVLI-----IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ + L+ +HG C+ +RV +A ++ ++ R C P+ + Y + + +G V
Sbjct: 175 LDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRV 234
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ +L G P Y I GL ++ E+ L VSG D +++
Sbjct: 235 KDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSV 294
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G S A ++ +G P + S L LCK K DE ++Y+V++ +
Sbjct: 295 IYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGC 354
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ +Y+ ++ LC +GR+ EA+ ++ M R G P YNSL++ C + L A +
Sbjct: 355 DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIE 414
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIE-GALRLFHNMLEKGVAPDATTYTSLLEGL 515
L ++M S C+ + TYNILI + ++ AL F M++ GV PD TY+ LLEGL
Sbjct: 415 LVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGL 474
Query: 516 CQETNLQ 522
+ +L
Sbjct: 475 KKSKDLH 481
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 212/465 (45%), Gaps = 11/465 (2%)
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
FN Q N S + IL SL S + + S+ +Q++ N IT D + +I
Sbjct: 59 FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFS 118
Query: 131 QGKNTQKAFSVFNEV-KFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEF 187
Q +FSV ++ K E P + +L+ L G I AL+ D++ G
Sbjct: 119 QLGQNPLSFSVLAKILKMGYE---PNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHL 175
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAF 246
+ + +G I C K+GQ + L +R+ + ++ +V+ II CK K V EAF
Sbjct: 176 NKVSYGTLINGLC---KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAF 232
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
+ E+ + PD + Y + F ++G + + + K + P + + G
Sbjct: 233 DLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGF 292
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTL 365
ERR+ EAK + +++ D N+L+ + + A FN + ++G P +
Sbjct: 293 CKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNI 352
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
+ S + CK K DE + ++K + N+ D+ +YN ++ LC G++ A ++ E
Sbjct: 353 HSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDE 412
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M +G+ D YNS+++A C+ + A L +M G ++ TY L+ + G
Sbjct: 413 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGR 472
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+E A +F ++L KG D YT++++G C + ++ +K
Sbjct: 473 LEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSK 517
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 208/471 (44%), Gaps = 26/471 (5%)
Query: 33 LLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILK 92
+L QLG ++ LS S++A++ L +G+ +PN ++ +++K
Sbjct: 112 ILINCFSQLG-QNPLSFSVLAKI----------LKMGY------EPNV----ITLTTLIK 150
Query: 93 SLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDI 152
L L QI+ +V L+ Y +I L + T A + V
Sbjct: 151 GLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQP 210
Query: 153 GPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML 212
+ N+++ + ++ A ++ EM +G+ + + I FC K+ +
Sbjct: 211 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLF 270
Query: 213 DEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
+++ EN IN +V +++ GFCK +R++EA VL + + KPD Y + + +
Sbjct: 271 NKMI-FEN--INPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRY 327
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
L+ V + + + + GV P + Y I G +++ EA L + + D
Sbjct: 328 CLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDV 387
Query: 332 DVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
N+LI + + S A+ + M ++G T +++ LCK ++ D+ + +
Sbjct: 388 VTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTK 447
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ D+ +Y +V LC +GRL +A V +++ KG DV+ Y ++++ C L
Sbjct: 448 MKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGL 507
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ L +M +GC N TY I+I + E + A +L M+ +G+
Sbjct: 508 FDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 181/389 (46%), Gaps = 16/389 (4%)
Query: 172 NALKMFDEMSH-RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE-NSMINGSVIA 229
N + F+ + H + + S FG + ++ V+S+ R+ E N + + VI
Sbjct: 54 NLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLH---RQMEFNGITSDLVIL 110
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
++I+ F + + +F VL ++ +P+ I + + L G + + K
Sbjct: 111 SILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVA 170
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL-NALIGSVSSID-PR 347
LG Y I GL + A +L V GK + V+ N +I S+ +
Sbjct: 171 LGFHLNKVSYGTLINGLCKVGQTSAALQLLRR-VDGKLVQPNVVMYNTIIDSMCKVKLVN 229
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A ++ M+ KG P + T + L C K + +++ + + ++ ++N++V
Sbjct: 230 EAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILV 289
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
C RL+EA V+ M ++G+ PDV YNSLM+ C + AK +++ + G +
Sbjct: 290 DGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVN 349
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF-- 525
N+ +Y+I+I F ++ +++ A+ LF M + PD TY SL++GLC+ + A
Sbjct: 350 PNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKL 409
Query: 526 --EVFNKSVNHDVMLARSILSTFMISLCR 552
E+ ++ V HD + SIL +LC+
Sbjct: 410 VDEMHDRGVPHDKITYNSILD----ALCK 434
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 135/560 (24%), Positives = 239/560 (42%), Gaps = 62/560 (11%)
Query: 47 LSPSLVARVI-NPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDS 105
LSPS+V +I NP + L FF WAS+ S +S++ I+ L
Sbjct: 57 LSPSIVTYIIKNP---PNSLLGFRFFIWASKFRRL-RSWVSHNMIIDMLIKDNGFELYWQ 112
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK-FNCEDIGPEI--CNSLLA 162
VLK++K ++ + + +I + + +KA F +K F+C+ P++ N++L
Sbjct: 113 VLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCK---PDVFTYNTVLH 169
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
V+ + AL +++ M + F + I C++ K L M DE+ +R +
Sbjct: 170 VMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRR--I 227
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+ + +II G C+ ++ + A+++ ++ C PD + Y + F +G V E
Sbjct: 228 LPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALG 287
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+LK K Y I GL RR +A+ + D + ++ +S
Sbjct: 288 LLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLS 347
Query: 343 SIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ A+ N M E+G VP + L K C DE ++ +S ND F+
Sbjct: 348 KAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSAC 407
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD-- 459
+Y +++ +C SG + +A + EM++ G P V +N+L++ C+ + A+ L+
Sbjct: 408 TYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKM 467
Query: 460 ----------------------------------------------QMFASGCSGNLKTY 473
Q+ SG + N+ TY
Sbjct: 468 EIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITY 527
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
NILI F + G I GA +LF + KG++PD+ TY +L+ GL + AF V ++ +
Sbjct: 528 NILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILK 587
Query: 534 HDVMLARSILSTFMISLCRR 553
+ + +FM CRR
Sbjct: 588 NGCTPITEVYKSFMTWSCRR 607
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/460 (20%), Positives = 195/460 (42%), Gaps = 34/460 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+++L +++ +LK + ++ LD Y +I L + + + A +
Sbjct: 267 VTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYR- 325
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
K +I P++ ++ L+ G +AL++ +EM+ RG+ T + I +C+
Sbjct: 326 -KMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDL 384
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L + S+ E+ K N + + ++I G C+ V +A ++ +E+ C P +
Sbjct: 385 GLLDEAKSLHLEISK--NDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVV 442
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
+ + + F G++ E+ +L K ++G P F+ R+ +
Sbjct: 443 TFNALIDGFCKAGNI-EKAQLLFYKMEIGRNPSL-----FL-------RLSQG------- 482
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIE---KGRVPTLSTLSNLSKNLCKRN 379
+D L ++ + D + +N +++ G P + T + L CK
Sbjct: 483 --ANRVLDTASLQTMVEQLC--DSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAG 538
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ +++K L D +Y +++ L ++ R +A+ V+ ++ + G P Y
Sbjct: 539 NINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYK 598
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
S M CR + + A LW + S + + + F E GE+E A+R M K
Sbjct: 599 SFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEENF-EKGEVEEAVRGLLEMDFK 657
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
YT L GLCQ L+ A ++F H+V++
Sbjct: 658 LNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLEEHNVLVT 697
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 143/340 (42%), Gaps = 35/340 (10%)
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
KR I+ VLI + K +E+A + + ++ +CKPD Y V +
Sbjct: 118 KRCGFSISADAFTVLI-QAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTV------LHV 170
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ +EVVL L L + R+ + L + F+I D
Sbjct: 171 MVRKEVVL-------------------LALGIYNRMLKLNCLPNI---ATFSILID---- 204
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
G S ++A+ F+ M ++ +P T + + LC+ K+D ++ + +
Sbjct: 205 --GMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGC 262
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D +YN ++ C GR+ EA G+++ ++ D Y+ L++ R A+
Sbjct: 263 IPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQV 322
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ +M ++ Y I++ S+ G+ + ALRL + M E+G+ PD Y +L++G C
Sbjct: 323 WYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYC 382
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
L A + + +D + + + +CR L+
Sbjct: 383 DLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLV 422
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 196/403 (48%), Gaps = 21/403 (5%)
Query: 136 QKAFSVFNEVKFNCEDIGPEIC------NSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
+ AF VF E ++G +C N +L +L G + A + +M RG
Sbjct: 234 RTAFRVFREY----SEVG--VCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDV 287
Query: 190 IGFGVFIWKFCENAKLGQVLSMLDEVRKR---ENSMINGSVIAVLIIHGFCKGKRVEEAF 246
+ + V + +C+ +LG+VL +++E++++ N S+I+ L CK RV EA
Sbjct: 288 VSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFL-----CKTGRVVEAE 342
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
+VL ++ + PD + Y + F G+V + + ++ + P Y I GL
Sbjct: 343 QVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGL 402
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTL 365
++ EA++L ++S D+ ALI G + + + A N M+EKG P +
Sbjct: 403 CQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNV 462
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
T + L LCK + D E+ +S ++ +YN +++ LC G + +A +++E
Sbjct: 463 VTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEE 522
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M G PD Y ++M+A C+ + A +L M G + T+N+L++ F G
Sbjct: 523 MDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGM 582
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+E RL ML+KG+ P+ATT+ SL++ C N++A E++
Sbjct: 583 LEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIY 625
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 195/428 (45%), Gaps = 9/428 (2%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
Q+ + +Y+SI+ L + ++ + VL+ +K +I D+ VY +I + N
Sbjct: 314 QRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNV 373
Query: 136 QKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
+ +F+E+K + I P+ S++ L G + A K+F EM +G++ + +
Sbjct: 374 SVEYKLFDEMKR--KKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYT 431
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
I +C+ ++ + S+ +++ E + V ++ G CK V+ A ++L E+
Sbjct: 432 ALIDGYCKAGEMKEAFSLHNQMV--EKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMS 489
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL-GVAPRTNDYREFILGLIVERRI 312
+ +P+ Y + +G++ E+ V L ++ L G P T Y + +
Sbjct: 490 EKGLQPNVCTYNALINGLCKVGNI-EQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEM 548
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
+A EL +++ N L+ G S +M++KG +P +T ++L
Sbjct: 549 AKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSL 608
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
K C RN +E+YK + A D +YN+++ C + ++EA+ + +EM KG
Sbjct: 609 MKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGF 668
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
+ YNSL++ + A+KL+++M G + Y+I + E G E L
Sbjct: 669 SLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLE 728
Query: 492 LFHNMLEK 499
L +EK
Sbjct: 729 LCDEAIEK 736
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 203/464 (43%), Gaps = 3/464 (0%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY+ IL L ++ S+L Q++ D Y I+ Q + K + E
Sbjct: 253 VSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEE 312
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ NS+++ L G + A ++ M ++ + + + I F ++
Sbjct: 313 LQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGN 372
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ + DE+++++ ++ V +IHG C+ +V EA K+ E+ + KPD + Y
Sbjct: 373 VSVEYKLFDEMKRKK--IVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTY 430
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + + G + E + + + G+ P Y + GL + A EL +
Sbjct: 431 TALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSE 490
Query: 325 GKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ NALI + + + A+ M G P T + + CK + +
Sbjct: 491 KGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAK 550
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
E+ +++ + ++NV+++ C SG L + +I+ M KG+ P+ + +NSLM+
Sbjct: 551 AHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMK 610
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C + +R +++ M A G + TYNILI + ++ A L M+EKG +
Sbjct: 611 QYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSL 670
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
A +Y SL++G + + A ++F + H + + I F+
Sbjct: 671 TAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFV 714
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 184/379 (48%), Gaps = 7/379 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+LL LA G + ++F M V + + +G+ + C+ ++G LS+LD +
Sbjct: 141 NTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSG 200
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE---CKPDFIAYRIVAEEFKLM 274
E+ + V+ I+ G CK R+++A K ++E R+R C P+ + Y +A F
Sbjct: 201 PESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEE-RMRSVHGCAPNTVTYNCLAHAFCRA 259
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL--GEVIVSGKFTIDDD 332
G+V ++ K K V P + GL R+ A E + V + +
Sbjct: 260 GNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAV 319
Query: 333 VLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
+ L+G+ + + + A+ F+ M+++G P + L + + D+ + +
Sbjct: 320 TYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSM 379
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+ D ++YN+++ C RL EAY ++ EMK GL PDV YN+L+ C+
Sbjct: 380 KKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDF 439
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
+L +M GC ++ T+ LI + +VG+I+ ALR+F +M E G+ P+ Y +L
Sbjct: 440 LAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTL 499
Query: 512 LEGLCQETNLQAAFEVFNK 530
++ LC+ + A E+F++
Sbjct: 500 IDFLCKSRDTSLAIELFDE 518
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 172/437 (39%), Gaps = 9/437 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+++++L +L+ + + + + ++ + + Y ++ L + A SV + +
Sbjct: 139 AFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSVLDGM 198
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEM--SHRGVEFSTIGFGVFIWKFCE 201
D+ P++ N+++ L G + A+K +E S G +T+ + FC
Sbjct: 199 SGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCR 258
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI--RECKP 259
+G ++ ++ K + +V I+ G C RV A + E R E +
Sbjct: 259 AGNVGMACELVAKMEKER--VTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARG 316
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
+ + Y + F +V + + G +P Y I GL R+ +A +
Sbjct: 317 NAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMA 376
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ F +D N LIG A M E G P + T + L LCK
Sbjct: 377 TSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKA 436
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+ E+ + + ++ ++ C G++ EA + + M G+ P+ Y
Sbjct: 437 GDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIY 496
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
N+L++ C+ A +L+D+M N+ T+N L+ + E A L M E
Sbjct: 497 NTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMRE 556
Query: 499 KGVAPDATTYTSLLEGL 515
PD T L+E L
Sbjct: 557 GRCTPDYVTIDILMEWL 573
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 107/286 (37%), Gaps = 52/286 (18%)
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
A+ L + + +G D N L+ +++ D F M + P + T L K
Sbjct: 121 ARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVK 180
Query: 374 NLCKRNKSDELVEVYKVLSA--NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK-- 429
LCK + + + V +S +D D+ N +V LC +GRL++A ++E R
Sbjct: 181 GLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVH 240
Query: 430 GLDPDVSFYNSLMEACCRE----------------------------------------- 448
G P+ YN L A CR
Sbjct: 241 GCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAA 300
Query: 449 -DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+ R + +W + GN TY+ L+ F + A+ LFH M+++G +PDA
Sbjct: 301 LEFFREKRTVWPE-----ARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIM 355
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
Y +++ GL Q L A+ + L + + CRR
Sbjct: 356 YFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRR 401
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 132/516 (25%), Positives = 230/516 (44%), Gaps = 20/516 (3%)
Query: 46 SLSPSLVARVINPYLLTHHSL-ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAID 104
+L P VA VI + L AL FN + F H+ +Y +++ L L + A++
Sbjct: 4 ALQPKHVAAVIR---YQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAME 60
Query: 105 SVLKQVKVNKITLDS----SVYRFIIPSLIQGKNTQKAFSVFNEVKF-NCEDIGPEI--C 157
VL +++ N +DS VY I+ + Q+A +VF + F +CE P +
Sbjct: 61 DVLAEMRKN---VDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCE---PSVQSY 114
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++ +L GY A K++ M G+ + + FC + L +L+ +
Sbjct: 115 NAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPG 174
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ S AV I GF K EA+ + DE+ + PD + + + G+V
Sbjct: 175 QGCEFNAVSYCAV--ISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNV 232
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E E + K K GV P + FI GL + I EA L E IVS T D N L
Sbjct: 233 QESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTL 292
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G A + + M+ G P T + + CK ++ + +
Sbjct: 293 ICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGF 352
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D +Y+ +++ LC G + A V E KG + YN+L++ ++ L+ A +
Sbjct: 353 IPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQ 412
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L M GCS ++ TYN++++ ++G + A + ++ + KG PD T+ +L++G C
Sbjct: 413 LMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYC 472
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++ N+ A E+ + ++H + +T + LC+
Sbjct: 473 KQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCK 508
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 174/380 (45%), Gaps = 3/380 (0%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A +FDEM +G+ + F I C+ + + + +V KR + +
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKR--GVCPNLFTFNIF 257
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I G C+ ++EA ++L+ + PD I+Y + F + E E L K GV
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIV 351
P Y I G + A ++ + F D+ ++LI G + D A+
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F +EKG ++ + L K L K+ + +++ K + + D+ +YN++V+ LC
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
G L +A G++ + KG PD+ +N+L++ C++ + A ++ D M + G + ++
Sbjct: 438 KMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI 497
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
TYN L++ + +++ + F MLEKG P+ TY L+E C++ + A E+F +
Sbjct: 498 TYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEM 557
Query: 532 VNHDVMLARSILSTFMISLC 551
+ L T + LC
Sbjct: 558 KTRGLTPDIVTLCTLICGLC 577
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 191/446 (42%), Gaps = 10/446 (2%)
Query: 88 HSI-LKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
H+I +KS ++ + A +L + ++ Y +I + +A+ +F+E+
Sbjct: 149 HTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEML 208
Query: 147 FNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ I P+I N L+ VL G + + K+F ++ RGV + F +FI C
Sbjct: 209 K--QGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGA 266
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ + +L+ + + VI+ +I GFCK ++ EA L ++ +P+
Sbjct: 267 IDEAARLLESIVSEG---LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFT 323
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + F G + + +L+ G P Y I GL + + A + +
Sbjct: 324 YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM 383
Query: 324 SGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
F + N L+ +S A+ M+E G P + T + + LCK
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
+ + A D+ ++N ++ C + +A ++ M G+ PDV YN+L+
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
C+ L + M GC+ N+ TYNILI F + ++ A+ LF M +G+
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVF 528
PD T +L+ GLC L A+E+F
Sbjct: 564 PDIVTLCTLICGLCSNGELDKAYELF 589
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 167/382 (43%), Gaps = 4/382 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++ G + NA K+ + +G + I C + + + +++ E
Sbjct: 325 NTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM- 383
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E + ++ ++ G K V +A +++ ++ C PD Y +V MG +
Sbjct: 384 -EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ +L G P + I G +R + +A E+ + ++S T D N L
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502
Query: 338 IGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ + +V F M+EKG P + T + L ++ CK K E +E++K +
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK-GLDPDVSFYNSLMEACCREDLLRPAK 455
D+ + ++ LC++G L +AY + ++++ + +N ++ A C + + A+
Sbjct: 563 TPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAE 622
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
KL+ +M S C+ + TY ++I + + G I+ A + KG+ P TT +L L
Sbjct: 623 KLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCL 682
Query: 516 CQETNLQAAFEVFNKSVNHDVM 537
C L A + N V + ++
Sbjct: 683 CVTHRLSEAVVIINLMVQNGIV 704
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 111/492 (22%), Positives = 201/492 (40%), Gaps = 57/492 (11%)
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLL 161
D +LKQ I D + +I L + N Q++ +F++V + P + N +
Sbjct: 205 DEMLKQ----GICPDILTFNKLIHVLCKKGNVQESEKLFSKVMK--RGVCPNLFTFNIFI 258
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
L G ID A ++ + + G+ I + I FC+++KL + L +
Sbjct: 259 QGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYL-------HK 311
Query: 222 MINGSV-----IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY------------ 264
M+N V II+GFCK ++ A K+L + + PD Y
Sbjct: 312 MVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGD 371
Query: 265 --RIVAEEFKLMGSVFEREVVL---------------------KKKRKLGVAPRTNDYRE 301
R +A ++ M F+ ++L K + G +P Y
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNL 431
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKG 360
+ GL + +A + ++ D N LI G + AI + M+ G
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P + T + L LCK K D +V+ +K + ++ +YN+++ C ++ EA
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAM 551
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS-GCSGNLKTYNILISK 479
+ +EMK +GL PD+ +L+ C L A +L+ + S + +NI+I+
Sbjct: 552 ELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINA 611
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
F E + A +LFH M APD TY +++ C+ N+ A ++++ ++ +
Sbjct: 612 FCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPS 671
Query: 540 RSILSTFMISLC 551
+ + LC
Sbjct: 672 FTTCGKVLNCLC 683
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 23/247 (9%)
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
+E C ++LG + GKF +DVL + +V S V+ M + GR
Sbjct: 40 LETYKCMIEKLG---LHGKFEAMEDVLAEMRKNVDSKMLEG--VYIGIMRDYGR------ 88
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ K E V V++ + D ++SYN +++ L G +A+ V MK
Sbjct: 89 ----------KGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMK 138
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF-SEVGEI 486
G+ PDV + M++ C A +L + M GC N +Y +IS F E +I
Sbjct: 139 DIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQI 198
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
E A LF ML++G+ PD T+ L+ LC++ N+Q + ++F+K + V + F
Sbjct: 199 E-AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257
Query: 547 MISLCRR 553
+ LCR+
Sbjct: 258 IQGLCRK 264
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 132/516 (25%), Positives = 230/516 (44%), Gaps = 20/516 (3%)
Query: 46 SLSPSLVARVINPYLLTHHSL-ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAID 104
+L P VA VI + L AL FN + F H+ +Y +++ L L + A++
Sbjct: 4 ALQPKHVAAVIR---YQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAME 60
Query: 105 SVLKQVKVNKITLDS----SVYRFIIPSLIQGKNTQKAFSVFNEVKF-NCEDIGPEI--C 157
VL +++ N +DS VY I+ + Q+A +VF + F +CE P +
Sbjct: 61 DVLAEMRKN---VDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCE---PSVQSY 114
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++ +L GY A K++ M G+ + + FC + L +L+ +
Sbjct: 115 NAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPG 174
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ S AV I GF K EA+ + DE+ + PD + + + G+V
Sbjct: 175 QGCEFNAVSYCAV--ISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNV 232
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E E + K K GV P + FI GL + I EA L E IVS T D N L
Sbjct: 233 QESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTL 292
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G A + + M+ G P T + + CK ++ + +
Sbjct: 293 ICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGF 352
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D +Y+ +++ LC G + A V E KG + YN+L++ ++ L+ A +
Sbjct: 353 IPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQ 412
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L M GCS ++ TYN++++ ++G + A + ++ + KG PD T+ +L++G C
Sbjct: 413 LMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYC 472
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++ N+ A E+ + ++H + +T + LC+
Sbjct: 473 KQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCK 508
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 174/380 (45%), Gaps = 3/380 (0%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A +FDEM +G+ + F I C+ + + + +V KR + +
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKR--GVCPNLFTFNIF 257
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I G C+ ++EA ++L+ + PD I+Y + F + E E L K GV
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIV 351
P Y I G + A ++ + F D+ ++LI G + D A+
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F +EKG ++ + L K L K+ + +++ K + + D+ +YN++V+ LC
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
G L +A G++ + KG PD+ +N+L++ C++ + A ++ D M + G + ++
Sbjct: 438 KMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVI 497
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
TYN L++ + +++ + F MLEKG P+ TY L+E C++ + A E+F +
Sbjct: 498 TYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEM 557
Query: 532 VNHDVMLARSILSTFMISLC 551
+ L T + LC
Sbjct: 558 KTRGLTPDIVTLCTLICGLC 577
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 192/446 (43%), Gaps = 10/446 (2%)
Query: 88 HSI-LKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
H+I +KS ++ + A +L + ++ Y +I + +A+ +F+E+
Sbjct: 149 HTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEML 208
Query: 147 FNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ I P+I N L+ VL G + + K+F ++ RGV + F +FI C
Sbjct: 209 K--QGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGA 266
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ + +L+ + + + VI+ +I GFCK ++ EA L ++ +P+
Sbjct: 267 IDEAARLLESIV---SEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFT 323
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + F G + + +L+ G P Y I GL + + A + +
Sbjct: 324 YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM 383
Query: 324 SGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
F + N L+ +S A+ M+E G P + T + + LCK
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
+ + A D+ ++N ++ C + +A ++ M G+ PDV YN+L+
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
C+ L + M GC+ N+ TYNILI F + ++ A+ LF M +G+
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLT 563
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVF 528
PD T +L+ GLC L A+E+F
Sbjct: 564 PDIVTLCTLICGLCSNGELDKAYELF 589
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 167/382 (43%), Gaps = 4/382 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++ G + NA K+ + +G + I C + + + +++ E
Sbjct: 325 NTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM- 383
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E + ++ ++ G K V +A +++ ++ C PD Y +V MG +
Sbjct: 384 -EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ +L G P + I G +R + +A E+ + ++S T D N L
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502
Query: 338 IGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ + +V F M+EKG P + T + L ++ CK K E +E++K +
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK-GLDPDVSFYNSLMEACCREDLLRPAK 455
D+ + ++ LC++G L +AY + ++++ + +N ++ A C + + A+
Sbjct: 563 TPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAE 622
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
KL+ +M S C+ + TY ++I + + G I+ A + KG+ P TT +L L
Sbjct: 623 KLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCL 682
Query: 516 CQETNLQAAFEVFNKSVNHDVM 537
C L A + N V + ++
Sbjct: 683 CVTHRLSEAVVIINLMVQNGIV 704
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 110/492 (22%), Positives = 200/492 (40%), Gaps = 57/492 (11%)
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLL 161
D +LKQ I D + +I L + N Q++ +F++V + P + N +
Sbjct: 205 DEMLKQ----GICPDILTFNKLIHVLCKKGNVQESEKLFSKVMK--RGVCPNLFTFNIFI 258
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
L G ID A ++ + + G+ I + I FC+++KL + L +
Sbjct: 259 QGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYL-------HK 311
Query: 222 MINGSV-----IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY------------ 264
M+N V II+GFCK ++ A K+L + + PD Y
Sbjct: 312 MVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGD 371
Query: 265 --RIVAEEFKLMGSVFEREVVL---------------------KKKRKLGVAPRTNDYRE 301
R +A ++ M F+ ++L K + G +P Y
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNL 431
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKG 360
+ GL + +A + ++ D N LI G + AI + M+ G
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P + T + L LCK K D +V+ +K + ++ +YN+++ C ++ EA
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAM 551
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS-GCSGNLKTYNILISK 479
+ +EMK +GL PD+ +L+ C L A +L+ + S + +NI+I+
Sbjct: 552 ELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINA 611
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
F + A +LFH M APD TY +++ C+ N+ A ++++ ++ +
Sbjct: 612 FCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPS 671
Query: 540 RSILSTFMISLC 551
+ + LC
Sbjct: 672 FTTCGKVLNCLC 683
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 23/247 (9%)
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
+E C ++LG + GKF +DVL + +V S V+ M + GR
Sbjct: 40 LETYKCMIEKLG---LHGKFEAMEDVLAEMRKNVDSKMLEG--VYIGIMRDYGR------ 88
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ K E V V++ + D ++SYN +++ L G +A+ V MK
Sbjct: 89 ----------KGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMK 138
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF-SEVGEI 486
G+ PDV + M++ C A +L + M GC N +Y +IS F E +I
Sbjct: 139 DIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQI 198
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
E A LF ML++G+ PD T+ L+ LC++ N+Q + ++F+K + V + F
Sbjct: 199 E-AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257
Query: 547 MISLCRR 553
+ LCR+
Sbjct: 258 IQGLCRK 264
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 225/472 (47%), Gaps = 19/472 (4%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+ ++ +++ +LK++K + + + Y +I + A+ +F ++
Sbjct: 44 TYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQM 103
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
N P + N+LL+ L +G +D A ++ DEM RG++ + + C+
Sbjct: 104 VEN--GCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTG 161
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
K+ L + ++ N V+A +I G CK R++EA K+ +++R C+PD +
Sbjct: 162 KIDMALKVFED---NSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVV 218
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEV 321
+ + + + E + VL+ P Y I GL ++ +A+E+ +
Sbjct: 219 TFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRM 278
Query: 322 IVSGKFTIDDDVL--NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
IV G I+ +V+ N+LI G + SA++ M G +P + T + L LCK
Sbjct: 279 IVRG---IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKT 335
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
++ E ++ + A D+ +Y+ ++ C R+ A + +M ++ + PDV +
Sbjct: 336 GRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTF 395
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
++L+E C L+ A++L ++M AS CS ++ TY L+ F +VG + A R+ M +
Sbjct: 396 STLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAK 455
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAF----EVFNKSVNHDVMLARSILSTF 546
+G P+ TYT+L++ C+ A+ E+ V +V+ RS++ F
Sbjct: 456 RGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGF 507
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 198/447 (44%), Gaps = 3/447 (0%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++ +++ + +Q+ N + Y ++ L + +A+ + +E
Sbjct: 78 VTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDE 137
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ ++L+A L G ID ALK+F++ S+ + + I C+ +
Sbjct: 138 MRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGR 197
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + + +++R ENS V ++ G CKG R++EA +VL+ + R C P+ I Y
Sbjct: 198 LDEACKLFEKMR--ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITY 255
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + G V + + V K+ G+ P Y I G + + A L E + +
Sbjct: 256 SSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTA 315
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
D N LI G + A F M K P + T S L CK + D
Sbjct: 316 TGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDM 375
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
++ + D+ +++ +V C +G + +A +++EM PDV Y SL++
Sbjct: 376 ARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 435
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C+ + A+++ +M GC N+ TY LI F G+ A +L M+ GV P
Sbjct: 436 GFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQP 495
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNK 530
+ TY SL+ G C +L+ A ++ +
Sbjct: 496 NVITYRSLIGGFCGTGDLEEARKMLER 522
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 178/385 (46%), Gaps = 3/385 (0%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A F +M +G + + V I FC+ K+ + +L E++ E+ + V +
Sbjct: 26 ATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMK--ESGLAPNVVTYSTV 83
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
IHGFC+ +V+ A+K+ ++ C P+ + Y + G + E +L + R+ G+
Sbjct: 84 IHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGL 143
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIV 351
P Y + GL +I A ++ E +G D + LI + A
Sbjct: 144 QPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACK 203
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F M E P + T + L LCK ++ E +V + + + ++ +Y+ ++ LC
Sbjct: 204 LFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLC 263
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+G++R+A V + M +G++P+V YNSL+ C + + A L ++M A+GC ++
Sbjct: 264 KTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDII 323
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
TYN LI + G A RLF +M K PD TY+ L+ G C+ + A +F+
Sbjct: 324 TYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM 383
Query: 532 VNHDVMLARSILSTFMISLCRRVLI 556
+ V+ ST + C L+
Sbjct: 384 LKQAVLPDVVTFSTLVEGYCNAGLV 408
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 155/326 (47%), Gaps = 5/326 (1%)
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
++I G CK R+ EA +++ + P+ Y ++ F + V ++LK+ ++
Sbjct: 11 TIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKE 70
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS---IDP 346
G+AP Y I G + ++ A +L +V + N L+ + +D
Sbjct: 71 SGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMD- 129
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A + M E+G P + L LCK K D ++V++ S D D+ +Y+ +
Sbjct: 130 -EAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTL 188
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
++ LC +GRL EA + ++M+ +PDV + +LM+ C+ D L+ A+++ + M C
Sbjct: 189 IAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNC 248
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ N+ TY+ LI + G++ A +F M+ +G+ P+ TY SL+ G C + +A
Sbjct: 249 TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALL 308
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+ + + +T + LC+
Sbjct: 309 LMEEMTATGCLPDIITYNTLIDGLCK 334
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 175/423 (41%), Gaps = 42/423 (9%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N T + ++Y S++ L + Q+ V K++ V I + Y +I A
Sbjct: 247 NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 306
Query: 139 FSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+ E+ P+I N+L+ L G A ++F +M + I + I
Sbjct: 307 LLLMEEMTAT--GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLI 364
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
FC+ ++ ++ D++ K+ +++ V ++ G+C V++A ++L+E+ +
Sbjct: 365 GGFCKLERIDMARTLFDDMLKQ--AVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 422
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C PD Y + + F +G + E VLK+ K G P Y I C A
Sbjct: 423 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALI------DAFCRA- 475
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
GK T+ +L ++G+ G P + T +L C
Sbjct: 476 --------GKPTVAYKLLEEMVGN-------------------GVQPNVITYRSLIGGFC 508
Query: 377 KRNKSDELVEVYKVLSANDYF-TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
+E ++ + L ++ DM +Y VM+ LC +GR+ A +++ +K+ G P
Sbjct: 509 GTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRH 568
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCS-GNLKTYNILISKFSEVGEIEGALRLFH 494
Y +L+ C+ L A ++ ++M S S N + Y +I + + G E A L
Sbjct: 569 DIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALAD 628
Query: 495 NML 497
+L
Sbjct: 629 ELL 631
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
++ +M+ LC + RL EA +MK+KG P+ YN L+ C+ + A L +M
Sbjct: 9 TWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEM 68
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
SG + N+ TY+ +I F +++ A +LF M+E G P+ TY +LL GLC+ +
Sbjct: 69 KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 128
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A+E+ ++ + + T M LC+
Sbjct: 129 DEAYELLDEMRERGLQPDKFSYDTLMAGLCK 159
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 38/91 (41%)
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
C N+ T+ I+I + + A F M +KG P+ TY L+ G C+ + A+
Sbjct: 3 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+ + + ST + CR+ +
Sbjct: 63 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKV 93
>gi|302761606|ref|XP_002964225.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
gi|300167954|gb|EFJ34558.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
Length = 580
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/493 (23%), Positives = 212/493 (43%), Gaps = 30/493 (6%)
Query: 67 ALGFFNWASQQ--PNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
AL F+ WA +Q ++ H Y+ ++++L+ +++++ IDSVL ++ +L+
Sbjct: 12 ALFFYRWAGKQNRSSYKHDSRIYNQVVRNLAAAKRLSDIDSVLGEMMDQGCSLEPEAALD 71
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
++ G +A ++FNE++ ++ I N + LA + +M +++ +
Sbjct: 72 LVVCYANGAMVDRAQAIFNELRHQGQEFPAHIYNVIFGALAKLQRFQDVFRMVEDLMAKN 131
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
FS + FC+ + + + L + + + + +I G CKG R++E
Sbjct: 132 FTFSDSTADALVRIFCKALAVDKAVRFLKWMSSKGLQVAMSTFEYNCLIEGLCKGDRIDE 191
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A ++ + +R D Y + E +G V + E VLK + P Y I
Sbjct: 192 ALRLYELMRGNNVPADIFTYNNMIECISKLGMVEQAEKVLKTMEESDCKPDKFIYTRVIN 251
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKG--- 360
G A L + + D V + +IG + A+V IE G
Sbjct: 252 GFCKLGNFKNAVVLLGRMKEAGYAPDAVVFDCIIGGLCKTSKFDEALVVLKVSIEAGCEP 311
Query: 361 ------------RVPTLSTL-SNLSKNLCKRNKSDELVEVY-----------KVLSANDY 396
+ P + L S L K LCK K + ++ ++L +
Sbjct: 312 DEVTYFKLAQERKCPATNLLYSRLMKCLCKTGKVEAACQLLEDLTNGSRESEQLLGGDGC 371
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ Y++++ LC G E + V++ M+ +G+ PD Y + A CR L A +
Sbjct: 372 KPDVVMYSIVIDALCAMGMTDEGFVVVKAMEERGVKPDAVVYTIFLYAFCRSARLDDACR 431
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L + M +GC ++ +YN L+ G+ E A RLF M+E G+ P+ TYT L+ LC
Sbjct: 432 LLEMMVEAGCYPDVISYNTLLFALCSAGQEEEACRLFQVMVETGIEPNVFTYTQLIRALC 491
Query: 517 QETNLQAAFEVFN 529
L+ A +FN
Sbjct: 492 STKKLEGARHLFN 504
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 174/416 (41%), Gaps = 41/416 (9%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQV--KVNKITLDSSVYRFIIPSLIQGKNTQ 136
NFT S + ++++ + ++ LK + K ++ + + Y +I L +G
Sbjct: 131 NFTFSDSTADALVRIFCKALAVDKAVRFLKWMSSKGLQVAMSTFEYNCLIEGLCKGDRID 190
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+A ++ ++ N N+++ ++ G ++ A K+ M + + I
Sbjct: 191 EALRLYELMRGNNVPADIFTYNNMIECISKLGMVEQAEKVLKTMEESDCKPDKFIYTRVI 250
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
FC+ + +L R +E +V+ II G CK + +EA VL
Sbjct: 251 NGFCKLGNFKNAVVLLG--RMKEAGYAPDAVVFDCIIGGLCKTSKFDEALVVLKVSIEAG 308
Query: 257 CKPDFIAYRIVAEEFKLMGS--VFEREV-VLKKKRKLGVAPR-----TNDYREFILGLIV 308
C+PD + Y +A+E K + ++ R + L K K+ A + TN RE
Sbjct: 309 CEPDEVTYFKLAQERKCPATNLLYSRLMKCLCKTGKVEAACQLLEDLTNGSRE------- 361
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI-------VFFNFMIEKGR 361
E ++ G D V+ +++ ID A+ V M E+G
Sbjct: 362 ----------SEQLLGGDGCKPDVVMYSIV-----IDALCAMGMTDEGFVVVKAMEERGV 406
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P + C+ + D+ + +++ + D+ SYN ++ LC++G+ EA
Sbjct: 407 KPDAVVYTIFLYAFCRSARLDDACRLLEMMVEAGCYPDVISYNTLLFALCSAGQEEEACR 466
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+ Q M G++P+V Y L+ A C L A+ L++ M S C +++TY LI
Sbjct: 467 LFQVMVETGIEPNVFTYTQLIRALCSTKKLEGARHLFNFMKLSKCVPDMETYKALI 522
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 158/388 (40%), Gaps = 31/388 (7%)
Query: 67 ALGFFNWASQQP-NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
A+ F W S + S Y+ +++ L +I+ + + ++ N + D Y +
Sbjct: 155 AVRFLKWMSSKGLQVAMSTFEYNCLIEGLCKGDRIDEALRLYELMRGNNVPADIFTYNNM 214
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHR 183
I + + ++A V ++ + D P+ I ++ G NA+ + M
Sbjct: 215 IECISKLGMVEQAEKVLKTMEES--DCKPDKFIYTRVINGFCKLGNFKNAVVLLGRMKEA 272
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSML----------DEVR----KRENSMINGSVIA 229
G + F I C+ +K + L +L DEV +E +++
Sbjct: 273 GYAPDAVVFDCIIGGLCKTSKFDEALVVLKVSIEAGCEPDEVTYFKLAQERKCPATNLLY 332
Query: 230 VLIIHGFCKGKRVEEAFKVLDELR--IRE---------CKPDFIAYRIVAEEFKLMGSVF 278
++ CK +VE A ++L++L RE CKPD + Y IV + MG
Sbjct: 333 SRLMKCLCKTGKVEAACQLLEDLTNGSRESEQLLGGDGCKPDVVMYSIVIDALCAMGMTD 392
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
E VV+K + GV P Y F+ R+ +A L E++V D N L+
Sbjct: 393 EGFVVVKAMEERGVKPDAVVYTIFLYAFCRSARLDDACRLLEMMVEAGCYPDVISYNTLL 452
Query: 339 GSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
++ S A F M+E G P + T + L + LC K + ++ + +
Sbjct: 453 FALCSAGQEEEACRLFQVMVETGIEPNVFTYTQLIRALCSTKKLEGARHLFNFMKLSKCV 512
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQE 425
DME+Y ++ + +REA ++++
Sbjct: 513 PDMETYKALILGHYQNEGVREARQLLEQ 540
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 2/169 (1%)
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES--YNVMVSFLCTSGRLREAYGVI 423
ST L + CK D+ V K +S+ M + YN ++ LC R+ EA +
Sbjct: 137 STADALVRIFCKALAVDKAVRFLKWMSSKGLQVAMSTFEYNCLIEGLCKGDRIDEALRLY 196
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+ M+ + D+ YN+++E + ++ A+K+ M S C + Y +I+ F ++
Sbjct: 197 ELMRGNNVPADIFTYNNMIECISKLGMVEQAEKVLKTMEESDCKPDKFIYTRVINGFCKL 256
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
G + A+ L M E G APDA + ++ GLC+ + A V S+
Sbjct: 257 GNFKNAVVLLGRMKEAGYAPDAVVFDCIIGGLCKTSKFDEALVVLKVSI 305
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 109/298 (36%), Gaps = 65/298 (21%)
Query: 320 EVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTL--SNLSKNLC 376
E +++ FT D +AL+ ++ A+ F +M KG +ST + L + LC
Sbjct: 125 EDLMAKNFTFSDSTADALVRIFCKALAVDKAVRFLKWMSSKGLQVAMSTFEYNCLIEGLC 184
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL-------------------------- 410
K ++ DE + +Y+++ N+ D+ +YN M+ +
Sbjct: 185 KGDRIDEALRLYELMRGNNVPADIFTYNNMIECISKLGMVEQAEKVLKTMEESDCKPDKF 244
Query: 411 ---------CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
C G + A ++ MK G PD ++ ++ C+ A +
Sbjct: 245 IYTRVINGFCKLGNFKNAVVLLGRMKEAGYAPDAVVFDCIIGGLCKTSKFDEALVVLKVS 304
Query: 462 FASGCSGNLKTY------------NILISKF----SEVGEIEGALRLFHNMLE------- 498
+GC + TY N+L S+ + G++E A +L ++
Sbjct: 305 IEAGCEPDEVTYFKLAQERKCPATNLLYSRLMKCLCKTGKVEAACQLLEDLTNGSRESEQ 364
Query: 499 ----KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
G PD Y+ +++ LC F V V + + F+ + CR
Sbjct: 365 LLGGDGCKPDVVMYSIVIDALCAMGMTDEGFVVVKAMEERGVKPDAVVYTIFLYAFCR 422
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 2/152 (1%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YNV+ L R ++ + +++++ K S ++L+ C+ + A + M
Sbjct: 104 YNVIFGALAKLQRFQDVFRMVEDLMAKNFTFSDSTADALVRIFCKALAVDKAVRFLKWMS 163
Query: 463 ASGCSGNLKT--YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
+ G + T YN LI + I+ ALRL+ M V D TY +++E + +
Sbjct: 164 SKGLQVAMSTFEYNCLIEGLCKGDRIDEALRLYELMRGNNVPADIFTYNNMIECISKLGM 223
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++ A +V D + I + + C+
Sbjct: 224 VEQAEKVLKTMEESDCKPDKFIYTRVINGFCK 255
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 210/438 (47%), Gaps = 9/438 (2%)
Query: 119 SSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKM 176
+ V++ I+ L A F E+ C P+ N+++ L+ +D+A+++
Sbjct: 10 AGVHKSILRGLCDAGQCSDAVLHFREMSKTCP---PDSVTYNTMINGLSKSDRLDDAIRL 66
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
+EM G + + + FC+ ++ L +L+++ R V +I+G
Sbjct: 67 LEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMR--GCPPDVVSYTTVINGL 124
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
CK +V+EA +V+D++ R C+P+ I Y + + F +G + +++K + G P
Sbjct: 125 CKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNA 184
Query: 297 NDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFN 354
Y + GL R++ A +L E+ SG D + ++ S V S A
Sbjct: 185 ITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVE 244
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+ KG P + T S+L LCK K DE + + ++ + ++ +YN ++ C G
Sbjct: 245 AMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLG 304
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
R+ EAY +++EM G P+V Y L++A C+ A L + M G NL TYN
Sbjct: 305 RIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYN 364
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
L+ F + E+E A +L +M++KG P+ +Y +++ GLC+ T + + + +++
Sbjct: 365 SLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSN 424
Query: 535 DVMLARSILSTFMISLCR 552
+ + +T + ++C+
Sbjct: 425 NCVPDIVTFNTIIDAMCK 442
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/478 (22%), Positives = 217/478 (45%), Gaps = 9/478 (1%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
F + SY+++L + ++ +L+Q+ + D Y +I L + +A
Sbjct: 75 FAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEAC 134
Query: 140 SVFNE-VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
V ++ ++ C+ P + +L+ G +D A+++ +M+ RG + I + +
Sbjct: 135 RVMDKMIQRGCQ---PNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIM 191
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C KL L + E+ + S I+ K +V++A ++++ + +
Sbjct: 192 HGLCSGRKLDSALQLFKEMEE-SGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKG 250
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C P+ + Y + G + E +L++ + G +P Y I G RI EA
Sbjct: 251 CSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAY 310
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
L E +V G + L+ + AI M+EKG VP L T ++L
Sbjct: 311 HLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMF 370
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
CK+++ + ++ + ++ SYN +++ LC + ++ E ++++M PD+
Sbjct: 371 CKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDI 430
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
+N++++A C+ + A +L++ + SGC+ NL TYN L+ + + A L
Sbjct: 431 VTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLRE 490
Query: 496 MLEK-GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M K G +PD TY ++++GLC+ + A+++F + ++ + S + SLC+
Sbjct: 491 MTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCK 548
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 202/448 (45%), Gaps = 16/448 (3%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++++ LS S +++ +L+++ N + Y ++ + + A + +
Sbjct: 45 VTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQ 104
Query: 145 -VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
V C P++ + +++ L +D A ++ D+M RG + + I +G + FC
Sbjct: 105 MVMRGCP---PDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFC- 160
Query: 202 NAKLGQVLSMLDEVRK-RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR-ECKP 259
++G + ++ VRK E ++ I+HG C G++++ A ++ E+ C P
Sbjct: 161 --RVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPP 218
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D Y + + G V + +++ G +P Y + GL ++ EA L
Sbjct: 219 DVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALL 278
Query: 320 EVIVSGKFTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+ + + + N +I + ID A M++ G P + T + L C
Sbjct: 279 QRMTRSGCSPNIVTYNTIIDGHCKLGRID--EAYHLLEEMVDGGCQPNVVTYTVLLDAFC 336
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K K+++ + + +V+ Y ++ +YN ++ C + A ++ M +KG P+V
Sbjct: 337 KCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVV 396
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN+++ C+ + L +QM ++ C ++ T+N +I + ++ A LF+ +
Sbjct: 397 SYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLI 456
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAA 524
E G P+ TY SL+ GLC+ A
Sbjct: 457 QESGCTPNLVTYNSLVHGLCKSRRFDQA 484
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 110/518 (21%), Positives = 219/518 (42%), Gaps = 54/518 (10%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN ++Y +++ ++ +++++ ++ Y I+ L G+
Sbjct: 146 QPNV----ITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLD 201
Query: 137 KAFSVFNEVKFNCEDIG---PEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
A +F E+ E+ G P++ ++++ L G +D+A ++ + M +G + +
Sbjct: 202 SALQLFKEM----EESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVT 257
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ + C+ KL + ++L + + S V II G CK R++EA+ +L+E
Sbjct: 258 YSSLLHGLCKAGKLDEATALLQRMTRSGCS--PNIVTYNTIIDGHCKLGRIDEAYHLLEE 315
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFER----EVVLKKKR------------------- 288
+ C+P+ + Y ++ + F G + EV+++K
Sbjct: 316 MVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDE 375
Query: 289 ------------KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ G P Y I GL ++ E L E ++S D N
Sbjct: 376 VERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNT 435
Query: 337 LIGSVSSIDPRSAIVF--FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I ++ R I + FN + E G P L T ++L LCK + D+ + + ++
Sbjct: 436 IIDAMCKT-YRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK 494
Query: 395 DYFT-DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ D+ +YN ++ LC S R+ AY + +M GL PD Y+ ++ + C+ +
Sbjct: 495 QGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDE 554
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A + + M +G TY LI F + G ++ AL + +L KG PD T++ ++
Sbjct: 555 ANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFID 614
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
L + L+ A E+ + ++ +T + C
Sbjct: 615 WLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC 652
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/458 (22%), Positives = 196/458 (42%), Gaps = 20/458 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y S+L L + +++ ++L+++ + + + Y II + +A+ + E
Sbjct: 256 VTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEE 315
Query: 145 -VKFNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
V C+ P + LL G ++A+ + + M +G + + + FC+
Sbjct: 316 MVDGGCQ---PNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCK 372
Query: 202 NAKLGQVLSMLDEVRKRENSMIN-GSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRE 256
++ + +L +SMI G V V+ +I G CK +V E +L+++
Sbjct: 373 KDEVERACQLL-------SSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 425
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C PD + + + + V + ++ G P Y + GL RR +A+
Sbjct: 426 CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAE 485
Query: 317 EL-GEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
L E+ + D N +I G S A F M+ G P T S + +
Sbjct: 486 YLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISS 545
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK DE V +++ N + +Y ++ C +G L +A ++Q + KG PD
Sbjct: 546 LCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPD 605
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V ++ ++ + LR A +L + M +G + TYN L+ F + E A+ LF
Sbjct: 606 VVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFE 665
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
M + G PD TYT+L+ L + + + +KS+
Sbjct: 666 VMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSM 703
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 141/592 (23%), Positives = 255/592 (43%), Gaps = 60/592 (10%)
Query: 4 RPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTH 63
R D R AI++ + RP W+ + E L S +P +V RV+N L
Sbjct: 3 RAPIDDIPRTVTAILNLLHSGRP---WSAI-EPDLSPFS-GASTTPRIVGRVVNS--LKD 55
Query: 64 HSLALGFFNWASQQ-PNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVY 122
LAL FF WA P F+H+ S++S+L+ L ++ + + + D Y
Sbjct: 56 AKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSY 115
Query: 123 RFIIPSLIQGKNTQKAFSVFNEVK------------------FNCEDIGPEI-------C 157
+I + A + E+K N D+ + C
Sbjct: 116 NIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGC 175
Query: 158 N-------SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS 210
+ +L+A A ++ A+K+ +EM RG + + + V + C KL V +
Sbjct: 176 DPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALC---KLSMVGA 232
Query: 211 MLDEVRKRENSMINGSVIAVL-----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
D V+K MI G + ++ GFCK V++A K+L + + +P+ + Y
Sbjct: 233 AQDVVKK----MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYS 288
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + E + VL++ + GV P Y I GL +I EA+++ +
Sbjct: 289 ALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS 348
Query: 326 KFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK-SDE 383
T D V +++I + S A M ++ + P + T + + LCK K ++
Sbjct: 349 GCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEA 408
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
V + ++ + D D+ +Y+ +++ LC S L EA ++ M + G +PDV Y ++++
Sbjct: 409 QVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIID 468
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C+ L A+ L M +GC+ N+ TY LIS + +++ A R+ M G P
Sbjct: 469 GLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPP 528
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNK------SVNHDVMLARSILSTFMIS 549
+ TY +++ GLC ++ A ++ + + D R+I++ M S
Sbjct: 529 NLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSS 580
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 168/379 (44%), Gaps = 45/379 (11%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NSL+ G +D+A K+ M +G+ + + + I C++ K + +L+E++
Sbjct: 253 NSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKT 312
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R + + +IHG CK ++EEA ++L + C PD + Y + F G +
Sbjct: 313 R--GVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKL 370
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E + L++ RK +P Y I GL +I EA+
Sbjct: 371 LEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQ--------------------- 409
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRV-PTLSTLSNLSKNLCKRNKSDELVEVYKVLS---A 393
V M E G V P + T S + LCK SD LVE K+L
Sbjct: 410 -------------VILEQMQESGDVLPDVVTYSTVINGLCK---SDMLVEAQKLLDRMCK 453
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
D+ +Y ++ LC GRL EA ++Q MKR G P+V Y +L+ C+ +
Sbjct: 454 AGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDE 513
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE--KGVAPDATTYTSL 511
A+++ ++M +GC NL TYN +++ G I+ A +L M + +PDA TY ++
Sbjct: 514 AERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTI 573
Query: 512 LEGLCQETNLQAAFEVFNK 530
+ L +Q A ++ +
Sbjct: 574 VNALMSSDLVQEAEQLLEQ 592
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 153/324 (47%), Gaps = 5/324 (1%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I GFC + A ++L+E++ PD + + M + + + + R +
Sbjct: 117 IVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPI---ITAMANAGDLDGAMDHLRSM 173
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
G P Y I +++ EA +L E + + N L+ ++ + A
Sbjct: 174 GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAA 233
Query: 351 V-FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
MIE G P + T ++L CKR D+ ++ ++ A ++ +Y+ ++
Sbjct: 234 QDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDG 293
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC S + EA V++EMK +G+ PD Y++L+ C+ D + A+++ +M SGC+ +
Sbjct: 294 LCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 353
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ Y+ +I F + G++ A + M ++ +PD TY ++++GLC+ + A +
Sbjct: 354 VVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILE 413
Query: 530 K-SVNHDVMLARSILSTFMISLCR 552
+ + DV+ ST + LC+
Sbjct: 414 QMQESGDVLPDVVTYSTVINGLCK 437
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 135/294 (45%), Gaps = 8/294 (2%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL- 231
A ++ +EM RGV + I C+ K+ + ML R+ S V+
Sbjct: 303 AKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQML---RRMAGSGCTPDVVVYSS 359
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
IIH FCK ++ EA K L E+R + PD + Y V + +G + E +V+L++ ++ G
Sbjct: 360 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419
Query: 292 -VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSA 349
V P Y I GL + EA++L + + D +I + A
Sbjct: 420 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 479
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
M G P + T + L LCK K DE V + + ++ +YN MV+
Sbjct: 480 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 539
Query: 410 LCTSGRLREAYGVIQEMK--RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
LC SGR++EA ++Q MK R PD + Y +++ A DL++ A++L +QM
Sbjct: 540 LCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 17/217 (7%)
Query: 345 DPRSAIVFFNFMIEKGRVPTLS----TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
D + A+ FF + +P S + ++L + L + K E ++++ D+
Sbjct: 55 DAKLALAFFRW--APASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDV 112
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
SYN+++S C +G L A +++EMK G PD + ++ A L A D
Sbjct: 113 CSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDH 169
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
+ + GC N+ TY LI+ F+ ++E A++L M E+G P+ TY L++ LC+ +
Sbjct: 170 LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSM 229
Query: 521 LQAAFEVFNKSVNH----DVMLARSILSTFMISLCRR 553
+ AA +V K + +VM S++ F C+R
Sbjct: 230 VGAAQDVVKKMIEGGFAPNVMTFNSLVDGF----CKR 262
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 95/241 (39%), Gaps = 42/241 (17%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y SI+ + S ++ L++++ + + D Y +I L + +A + +++
Sbjct: 357 YSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQ 416
Query: 147 FNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ D+ P++ ++++ L + A K+ D M G + + I C+ +
Sbjct: 417 ES-GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGR 475
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR----------- 253
L + +L + KR N V +I G CK ++V+EA +V++E+R
Sbjct: 476 LEEAEYLLQGM-KRAGCAPN-VVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTY 533
Query: 254 ------------IRE--------------CKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
I+E C PD YR + V E E +L++
Sbjct: 534 NTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593
Query: 288 R 288
+
Sbjct: 594 K 594
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 218/479 (45%), Gaps = 14/479 (2%)
Query: 58 PYLLTH-HSLALGFFNWASQQPNFTH------SPLSYH--SILKSLSLSRQINAIDSVLK 108
P L H HSL N F H +P ++H IL SL ++ S+ K
Sbjct: 23 PNLCFHSHSLPPLTHNADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYK 82
Query: 109 QVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDG 168
Q++++++ D II AFS +++ N+L+ L +G
Sbjct: 83 QMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEG 142
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV- 227
+ AL+ D++ +G S I +G+ I C K+G+ + + +R+ E I +V
Sbjct: 143 KVKEALRFHDKVLAQGFRLSGISYGILINGVC---KIGETRAAIRLLRRIERWSIRPNVV 199
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
I +II CK V+EA+ + E+ + PD + Y I+ F ++G + +L +
Sbjct: 200 IYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEM 259
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP- 346
+ P Y + L E ++ EA+ + V+V +D V + L+ ++
Sbjct: 260 VLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEV 319
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+A F M + G P + S + LCK + DE + +++ + + D +Y +
Sbjct: 320 NNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSL 379
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC SGR+ + + EM +G PDV YN+L++A C+ L A L+++M
Sbjct: 380 IDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAI 439
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
N+ T+ IL+ +VG ++ AL F ++L KG + TYT ++ GLC+E L A
Sbjct: 440 RPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEAL 498
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 196/439 (44%), Gaps = 17/439 (3%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
L LG+ QPN ++ ++++K L L ++ +V L Y +
Sbjct: 120 LKLGY------QPN----TITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGIL 169
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
I + + T+ A + ++ I + ++ L D +D A ++ EM +G+
Sbjct: 170 INGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGI 229
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGFCKGKRVEE 244
+ + + + FC +L + + +L+E+ EN IN + +++ CK +V+E
Sbjct: 230 SPDVVTYSILVSGFCIVGQLNRAIDLLNEM-VLEN--INPDIYTYTILVDALCKEGKVKE 286
Query: 245 AFKVLDELRIREC-KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
A VL + ++ C D + Y + + + L+ V + V ++GV P + Y I
Sbjct: 287 AENVL-AVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMI 345
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV-FFNFMIEKGRV 362
GL +R+ EA L E I D +LI + S + F+ M+++G+
Sbjct: 346 NGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQP 405
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + T +NL LCK D + ++ + ++ ++ +++ LC GRL+ A
Sbjct: 406 PDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEF 465
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
Q++ KG +V Y ++ C+E LL A L +M +GC + T+ I+I F +
Sbjct: 466 FQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFD 525
Query: 483 VGEIEGALRLFHNMLEKGV 501
E + A +L M+ +G+
Sbjct: 526 KDENDKAEKLVREMIARGL 544
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 103/196 (52%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
+++ G P TL+ L K LC K E + + + A + SY ++++ +C G
Sbjct: 119 ILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGE 178
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
R A +++ ++R + P+V Y+ +++ C++ L+ A L+ +M G S ++ TY+I
Sbjct: 179 TRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSI 238
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
L+S F VG++ A+ L + M+ + + PD TYT L++ LC+E ++ A V V
Sbjct: 239 LVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKAC 298
Query: 536 VMLARSILSTFMISLC 551
V L + ST M C
Sbjct: 299 VNLDVVVYSTLMDGYC 314
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 143/571 (25%), Positives = 249/571 (43%), Gaps = 44/571 (7%)
Query: 24 TRPARKWTPLLEQTLHQLGLRDS---LSPSLVARVINPYLLTHHSLALGFFNWASQQPNF 80
T A +W LL + LR+S ++P + +++ L + S ++ F+W Q +
Sbjct: 51 TDSANEWEKLL-KPFDLDSLRNSFHKITPFQLYKLLE--LPLNVSTSMELFSWTGSQNGY 107
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
HS Y ++ L + + ID +L Q+K I S++ I+ + +
Sbjct: 108 RHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTR 167
Query: 141 VFNEVK--FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ E++ ++CE N +L +L S A +F +M R + + FGV +
Sbjct: 168 LMLEMRNVYSCEPTFKSY-NVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKA 226
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
FC ++ LS+L ++ K + + SVI +IH K RV EA ++L+E+ + C
Sbjct: 227 FCAVNEIDSALSLLRDMTK--HGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 284
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD + V + E ++ + G AP Y + GL R+ AK+L
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 319 ------GEVIV----------SGKFTIDDDVLNALI---GSVSSIDPRSAIVF------- 352
E+++ G+ VL+ ++ G V + +++++
Sbjct: 345 FYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 353 -------FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
+ M KG P + + + L CK K DE V +SA+ + +N
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++S C R+ EA + +EM RKG PDV +NSL+ C D ++ A L M + G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
N TYN LI+ F GEI+ A +L + M+ +G D TY SL++GLC+ + A
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+F K + + + + LCR ++
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMV 615
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/498 (22%), Positives = 208/498 (41%), Gaps = 64/498 (12%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++ ++K+ +I++ S+L+ + + +S +Y+ +I SL + +A + E
Sbjct: 218 FTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEE 277
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ E N ++ L I+ A KM + M RG I +G + C+ +
Sbjct: 278 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR 337
Query: 205 LGQVLSMLDEVRKRE----NSMINGSVI--------AVL------------------IIH 234
+ + + K E N++I+G V AVL +I+
Sbjct: 338 VDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
G+ K V A +VL ++R + CKP+ +Y I+ + F +G + E VL + G+ P
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFN 354
T + I E RI EA E+ F
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEI----------------------------------FR 483
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M KG P + T ++L LC+ ++ + + + + + + +YN +++ G
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
++EA ++ EM +G D YNSL++ CR + A+ L+++M G + + + N
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
ILI+ G +E A+ M+ +G PD T+ SL+ GLC+ ++ +F K
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663
Query: 535 DVMLARSILSTFMISLCR 552
+ +T M LC+
Sbjct: 664 GIPPDTVTFNTLMSWLCK 681
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 190/399 (47%), Gaps = 12/399 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL VL G +++A ++FDEM+ + +G+ I +C +L + +LD++
Sbjct: 266 NILLKVLCGAGRVEDARQLFDEMA---SPPDVVTYGILIHGYCALGELENAVKLLDDMVA 322
Query: 218 R---ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
R N+ + SV+A+L C RV +A V++++ + D Y V F
Sbjct: 323 RGVEPNATVYTSVVALL-----CDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNK 377
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G + + ++ G+A Y I GL + EA+++ + +++ + +D+
Sbjct: 378 GDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTY 437
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
L+ G A N M+++G P + T + LS LCK+ E+ +S
Sbjct: 438 TVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSN 497
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ +YN +++ LC +G L +A + +M GL PDV Y +L++A C+ L
Sbjct: 498 KGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDR 557
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A L +M +G + TYN+L++ F G +EG +L MLEK + P+ATTY SL++
Sbjct: 558 AHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMK 617
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
C N+++ E++ + +V + + + C+
Sbjct: 618 QYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCK 656
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 174/378 (46%), Gaps = 9/378 (2%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+ S++A+L G + +AL + ++M H V + + FC L DE+
Sbjct: 331 VYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEM 390
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+++ + V +I+G C+ ++EA KVL E+ R D + Y ++ + + G
Sbjct: 391 QRK--GLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRG 448
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ E V + GVAP Y GL + + A EL + + ++ N
Sbjct: 449 KMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYN 508
Query: 336 ALIGSVSS---IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
+LI + +D A+ M G P + T + L LCK + D ++ + +
Sbjct: 509 SLINGLCKAGYLD--QAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEML 566
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
N + +YNV+++ C SGR+ +++ M K + P+ + YNSLM+ C + ++
Sbjct: 567 DNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMK 626
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN-MLEKGVAPDATTYTSL 511
+++ M + N TYNILI + ++ A + FHN M+EKG A++Y++L
Sbjct: 627 STTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEA-QYFHNEMIEKGFRLTASSYSAL 685
Query: 512 LEGLCQETNLQAAFEVFN 529
+ L ++ A ++F+
Sbjct: 686 IRLLNKKKKFVEARKLFH 703
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 73/126 (57%), Gaps = 4/126 (3%)
Query: 429 KGL-DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
+GL D +V YN L++ C + A++L+D+M + ++ TY ILI + +GE+E
Sbjct: 255 QGLPDKNVCSYNILLKVLCGAGRVEDARQLFDEMASPP---DVVTYGILIHGYCALGELE 311
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
A++L +M+ +GV P+AT YTS++ LC + + A V V+H V+L ++ +T +
Sbjct: 312 NAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVL 371
Query: 548 ISLCRR 553
C +
Sbjct: 372 SGFCNK 377
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 7/171 (4%)
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
DE +E+++ L + + SYN+++ LC +GR+ +A + EM PDV Y L
Sbjct: 248 DEAIELFQGLPDKN----VCSYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGIL 300
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ C L A KL D M A G N Y +++ + G + AL + +M+ V
Sbjct: 301 IHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKV 360
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
D YT++L G C + +L +A F++ + +T + LCR
Sbjct: 361 ILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCR 411
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 212/477 (44%), Gaps = 42/477 (8%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y+ ++ L +I+A +VLK + D Y +I Q +A + ++K
Sbjct: 130 YNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMK 189
Query: 147 FNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + P+ N+LL L ++ K+ +EM G E T + + CE+ K
Sbjct: 190 ES--GLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGK 247
Query: 205 L---GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
G++L + E + + + S ++ GFCK +++EA ++L+++ R C P
Sbjct: 248 YEEAGKILEKMIEKKCGPDVVTYNS-----LMDGFCKVSKMDEAERLLEDMVGRRCAPTV 302
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
I Y + F + + V++ K G++P Y + GL ++ EA EL EV
Sbjct: 303 ITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEV 362
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+V D + L+ + + A + M+E+G P L T + + CK K
Sbjct: 363 MVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGK 422
Query: 381 SDE---LVEVYKVLSA--------------------NDYFT------DMESYNVMVSFLC 411
DE ++E+ K +S D F D SY+ M+ LC
Sbjct: 423 VDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLC 482
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
++G++ EA V+ M ++G P S Y ++ C + A K+ M GC NL
Sbjct: 483 STGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLY 542
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
TY+ILI+ + +E A+ + MLEKG PD TYTSL++G C+ + AA++ F
Sbjct: 543 TYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCF 599
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/513 (22%), Positives = 230/513 (44%), Gaps = 51/513 (9%)
Query: 51 LVARVINPYLLTHHSLALGFFNWAS-----------QQPNFTHSPLSYHSILKSLSLSRQ 99
++ R P ++T+ SL +G + ++ T ++Y+++L L Q
Sbjct: 153 MLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQ 212
Query: 100 INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEIC- 157
+ + +L+++ D+ Y ++ L + ++A + + ++ C GP++
Sbjct: 213 LEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKC---GPDVVT 269
Query: 158 -NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
NSL+ +D A ++ ++M R + I + I F +L +++++
Sbjct: 270 YNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMF 329
Query: 217 KRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
K + I+ ++ ++ G CK ++EEA ++L+ + ++C PD + Y I+ +G
Sbjct: 330 K---AGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLG 386
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
V + ++L+ + G P + I G ++ E ++ E++ T D +
Sbjct: 387 KVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYS 446
Query: 336 ALI------------------------------GSVSSIDPRSAIVFFNFMIEKGRVPTL 365
LI G S+ A + M ++G PT
Sbjct: 447 TLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTS 506
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
S + + LC + DE +++ +V+S ++ +Y+++++ LC + R+ +A V+
Sbjct: 507 SHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDV 566
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M KG PDV+ Y SL++ C+ + + A + + M SGC + YNILIS F + G
Sbjct: 567 MLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGN 626
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+E A+ + MLEKG PDA TY SL+ L E
Sbjct: 627 VEKAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 165/380 (43%), Gaps = 40/380 (10%)
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA-VLI 232
L++ +EM R I + +C+ L + LS R + + ++
Sbjct: 44 LEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHF-----RGKMWCSPTAFTYCIL 98
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
IHG C+ +R++EA+++LDE+ ++C PD Y + MG + VLK +
Sbjct: 99 IHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSC 158
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVF 352
P Y I+G + EA++L E + T D NAL+
Sbjct: 159 VPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALL-------------- 204
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
LCK+N+ +E+ ++ + + D SYN +V+ LC
Sbjct: 205 --------------------NGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCE 244
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
SG+ EA ++++M K PDV YNSLM+ C+ + A++L + M C+ + T
Sbjct: 245 SGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVIT 304
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
Y LI FS + A R+ +M + G++PD TY LL+GLC+ L+ A E+ V
Sbjct: 305 YTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMV 364
Query: 533 NHDVMLARSILSTFMISLCR 552
D S + LC+
Sbjct: 365 EKDCAPDVVTYSILVNGLCK 384
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 200/459 (43%), Gaps = 60/459 (13%)
Query: 119 SSVYRFIIPSLIQGKNTQKAFSVFNEV---KFNCEDIGPEIC--NSLLAVLASDGYIDNA 173
+S Y +I + N++ + NE+ +F+ P++ N++L G +D A
Sbjct: 24 NSTYGALITGFSRAGNSKMVLEIANEMLARRFS-----PDVITHNTILKAYCQIGDLDRA 78
Query: 174 LKMFDEMSHRGVEF---STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
L F RG + + + + I C+ ++ + +LDE+ +++ + +
Sbjct: 79 LSHF-----RGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCH--PDAAVYN 131
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I G CK +++ A VL + R C PD I Y + ++ E +++K ++
Sbjct: 132 CLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKES 191
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSA 349
G+ P T Y + GL + ++ E +L E +V D N ++ + S A
Sbjct: 192 GLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEA 251
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE-------------------------- 383
MIEK P + T ++L CK +K DE
Sbjct: 252 GKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGG 311
Query: 384 ------LVEVYKVLSANDYF-----TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
L + Y+V+ D F D+ +YN ++ LC +G+L EA+ +++ M K
Sbjct: 312 FSRADRLADAYRVM--EDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCA 369
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
PDV Y+ L+ C+ + A+ L + M GC NL T+N +I F + G+++ ++
Sbjct: 370 PDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKV 429
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
M E PD TY++L++G C+ +Q AF + S
Sbjct: 430 LELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGIS 468
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 2/187 (1%)
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ P FF P+ ST L + S ++E+ + A + D+ ++
Sbjct: 3 VRPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITH 62
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N ++ C G L A + + P Y L+ C+ + A +L D+M
Sbjct: 63 NTILKAYCQIGDLDRALSHFR--GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQ 120
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
C + YN LI+ ++G+I+ A + MLE+ PD TYTSL+ G CQ L
Sbjct: 121 KDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDE 180
Query: 524 AFEVFNK 530
A ++ K
Sbjct: 181 ARKLMEK 187
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 132/553 (23%), Positives = 246/553 (44%), Gaps = 58/553 (10%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDS 105
+L P VA V+ + T AL FN A + F H+ +Y I++ L + ++
Sbjct: 4 TLLPKHVAAVVK--IQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEK 61
Query: 106 VLKQVK--VNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF-NCEDIGPEICNSLLA 162
+L +++ VN L+ + + +GK Q+A F + F NC D N+++
Sbjct: 62 LLSEMRENVNNALLEGAYIEAMKNYGRKGK-VQEAVDTFERMDFYNC-DPSVHSHNAIMN 119
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
+L GY + A K++ M RGV+ + + I FC+ A+ L +L + E
Sbjct: 120 ILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMP--ELGC 177
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+ +V ++ G + A ++ DE+ R PD +A+ + G VFE E
Sbjct: 178 DSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESER 237
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVE---------RRICEAKELGEVIVSGKFTIDDDV 333
+L K K GV P + F+ GL E R+ EA+E +V+G F DD
Sbjct: 238 LLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLT 297
Query: 334 LNALI------------------------------------GSVSSIDPRSAIVFFNFMI 357
N++I G DP A+ F +
Sbjct: 298 YNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGL 357
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
KG P++ + L K L ++ +++ ++ N ++ +YN++++ LC G +
Sbjct: 358 GKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVS 417
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+A ++ + KG PD+ YN+L++ C++ L A ++ ++M++ G + ++ TYN L+
Sbjct: 418 DASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLL 477
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVN 533
+ + G+ E + +F M EKG P+ TY +++ LC+ + A ++ +K +
Sbjct: 478 NGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLK 537
Query: 534 HDVMLARSILSTF 546
DV+ ++ + F
Sbjct: 538 PDVVSFGTLFTGF 550
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 196/455 (43%), Gaps = 48/455 (10%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALK 175
++ Y ++ L A +F+E+ C + P++ N L+ VL G + + +
Sbjct: 180 NAVAYCTVVAGLYDSGEHDHARELFDEMLARC--LCPDVVAFNKLVHVLCKKGLVFESER 237
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL--SMLDEVRKRENSMINGS-----VI 228
+ ++ RGV + F +F+ C L + + S + E + M+NG +
Sbjct: 238 LLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLT 297
Query: 229 AVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
II G+CK V++A +VL + + KPD Y + F G V K
Sbjct: 298 YNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGL 357
Query: 289 KLGVAPRTNDYREFILGLIVERRICEA----KELGE-----------VIVSG-------- 325
G+ P Y I GL + I A E+ E ++++G
Sbjct: 358 GKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVS 417
Query: 326 --KFTIDDDV----------LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
+DD + N LI G + SA N M +G P + T + L
Sbjct: 418 DASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLL 477
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
LCK KS+E++E++K + ++ +YN++V LC + ++ EA ++ EMK KGL
Sbjct: 478 NGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLK 537
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFAS-GCSGNLKTYNILISKFSEVGEIEGALR 491
PDV + +L C+ + A +L+ +M TYNI++S FSE + A++
Sbjct: 538 PDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMK 597
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
LF M G PD TY +++G C+ N+ ++
Sbjct: 598 LFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYK 632
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/395 (20%), Positives = 158/395 (40%), Gaps = 47/395 (11%)
Query: 173 ALKMFDEM-SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR-ENSMINGSVIAV 230
AL+MF+ S G + + + + K + + ++ +L E+R+ N+++ G+ I
Sbjct: 23 ALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIEA 82
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+ +G KGK V+EA + + C P ++ + G + V + R
Sbjct: 83 MKNYGR-KGK-VQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDR 140
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
GV Y I + C+ P +A+
Sbjct: 141 GVQSDVYTYT------IRIKSFCKTAR----------------------------PYAAL 166
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
M E G + L + D E++ + A D+ ++N +V L
Sbjct: 167 RLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVL 226
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR---------PAKKLWDQM 461
C G + E+ ++ ++ ++G+ P++ +N ++ CRE L A++ +M
Sbjct: 227 CKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKM 286
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G + TYN +I + + G ++ A R+ + + KG PD TY SL+ G C++ +
Sbjct: 287 VNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDP 346
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
A VF + + + + +T + L ++ LI
Sbjct: 347 DRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLI 381
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/405 (20%), Positives = 154/405 (38%), Gaps = 47/405 (11%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
F L+Y+SI+ + + VLK D Y +I + + +A
Sbjct: 291 FEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAM 350
Query: 140 SVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
+VF + + + P I N+L+ L+ G I AL++ +EM+ G + + + I
Sbjct: 351 AVFKDGLG--KGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVIN 408
Query: 198 KFCENAKLGQVLSMLDEVRKRE--------NSMING------------------------ 225
C+ + ++D+ + N++I+G
Sbjct: 409 GLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTP 468
Query: 226 SVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
VI +++G CK + EE ++ + + C P+ I Y I+ + V E +L
Sbjct: 469 DVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLL 528
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS- 343
+ + G+ P + G I A +L + +I S S
Sbjct: 529 GEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSE 588
Query: 344 -IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN---DYFTD 399
++ A+ F+ M G P T + CK + + YK L N +
Sbjct: 589 QLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMG---NITQGYKFLLENMEKRFIPS 645
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+ ++ +++ LC ++ EA G+I M +KG+ P+ N++ EA
Sbjct: 646 LTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPET--VNTIFEA 688
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/500 (23%), Positives = 223/500 (44%), Gaps = 18/500 (3%)
Query: 62 THHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV 121
T AL FNWAS+QPNF S Y IL+ L + + VL+++K++ D +
Sbjct: 75 TDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGI 134
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNC---ED---IGPE--ICNSLLAVLASDGYIDNA 173
+ + S GK F +++EV ED I P+ N LL VL +
Sbjct: 135 FLIFVESY--GK-----FELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLV 187
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLII 233
M R + F + I C+ ++ + M++E+ + I+
Sbjct: 188 ESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSY--GLSPDETTFTTIM 245
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
G+ +G ++ A ++ +++ C + ++ F G + + +++ G
Sbjct: 246 QGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFR 305
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVF 352
P Y + GL A E+ + ++ G D N+LI + + + A+
Sbjct: 306 PDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKI 365
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
+ M+ + P T + + +LCK N+ DE E+ ++L++ D+ ++N ++ LC
Sbjct: 366 LDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCL 425
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
S + A + +EMK KG PD YN L+++ C L A L +M +GC+ N+
Sbjct: 426 SSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVI 485
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YN LI F + IE A +F M +GV+ D+ TY +L++GLC+ ++ A ++ ++ +
Sbjct: 486 YNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMI 545
Query: 533 NHDVMLARSILSTFMISLCR 552
+ + ++ + C+
Sbjct: 546 MEGLRPDKFTYNSLLTHFCK 565
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 196/442 (44%), Gaps = 9/442 (2%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y+ +L L + ++ ++S + +I D S + +I +L + + A + E+
Sbjct: 171 YNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMP 230
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
+++ G +D AL++ ++M G + + V I FC+ ++
Sbjct: 231 SYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRID 290
Query: 207 QVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
Q LS + E R + + +++G CK + A +V+D + + PD
Sbjct: 291 QALSFIQEAVSEGFRPDQFTYNT-----LVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYT 345
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + +G + E +L + +P Y I L E R+ EA E+ ++
Sbjct: 346 YNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLT 405
Query: 324 SGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
S D N+LI G S + +SA+ F M KG P T + L +LC K +
Sbjct: 406 SKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLE 465
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E + + K + N ++ YN ++ C + R+ EA + EM+ +G+ D YN+L+
Sbjct: 466 EALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLI 525
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+ C+ + A +L DQM G + TYN L++ F + G+I+ A + M G
Sbjct: 526 DGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCN 585
Query: 503 PDATTYTSLLEGLCQETNLQAA 524
PD TY +L+ GLC+ +Q A
Sbjct: 586 PDIVTYATLISGLCKAGRVQVA 607
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 155/394 (39%), Gaps = 50/394 (12%)
Query: 56 INPYLLTHHSLALGFFNWA---------SQQPNFTHSP--LSYHSILKSLSLSRQINAID 104
++P + T++SL G Q + SP ++Y++I+ SL +++
Sbjct: 339 LDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEAT 398
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
+ + + I D + +I L N + A +F E+K N L+ L
Sbjct: 399 EIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSL 458
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
S ++ AL + EM G + + + I FC+N ++ + + DE+ + S
Sbjct: 459 CSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVS--R 516
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
SV +I G CK KRVE+A +++D++ + +PD Y + F G + + ++
Sbjct: 517 DSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIV 576
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV--- 341
+ G P Y I GL R+ A L I + N +I ++
Sbjct: 577 QTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKR 636
Query: 342 --------------SSIDPRSAIVF-----------------FNF---MIEKGRVPTLST 367
+P AI + +F MIE+G +P S+
Sbjct: 637 NRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSS 696
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
L++ LC + D LV++ ++ F++ E
Sbjct: 697 FVMLAEGLCTLSMDDTLVKLVDMIMEKAKFSERE 730
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Query: 418 EAYGVIQEMKRK-GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
E G+++ M+ + + PD FYN L+ + L+ + M ++ T+NIL
Sbjct: 150 EVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNIL 209
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I + ++ A+ + M G++PD TT+T++++G + NL A + + V +
Sbjct: 210 IKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGC 269
Query: 537 MLARSILSTFMISLCRR 553
++ + C++
Sbjct: 270 PCTDVTVNVLINGFCKQ 286
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 205/418 (49%), Gaps = 5/418 (1%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
Y +I I+ N ++A + +E+ + N+++ +A G + A+ +F+EM
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
G+E T + + I + ++ + + +L E++ R+ + ++I G C
Sbjct: 408 LMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK--LTPSPFTYSVLISGLCHSS 465
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV-VLKKKRKLGVAPRTNDY 299
+++A +VLD++ KP+ Y + + + + S +E + +LK GV P Y
Sbjct: 466 DLQKANEVLDQMIRNGVKPNVFMYGTLIKAY-VQESRYEMAIELLKIMIANGVLPDLFCY 524
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIE 358
I+GL +++ EAK L + + A I S S + + A +F M+
Sbjct: 525 NCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLS 584
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
G VP + L K C + E + +K + D+ +Y+ ++ L +G+ +E
Sbjct: 585 SGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKE 644
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A GV + + G+ PDV YNSL+ C+E + A +L+D+M +G + N+ YN LI+
Sbjct: 645 AMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLIN 704
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
++GE+ A LF + EK + PD TY+++++G C+ NL AF++F++ ++ +
Sbjct: 705 GLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGI 762
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 111/536 (20%), Positives = 215/536 (40%), Gaps = 41/536 (7%)
Query: 55 VINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNK 114
+I+ YL +H + T SP +Y ++ L S + + VL Q+ N
Sbjct: 422 LIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNG 481
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI-C-NSLLAVLASDGYIDN 172
+ + +Y +I + +Q + A + + N + P++ C N L+ L ++
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIAN--GVLPDLFCYNCLIIGLCRAKKVEE 539
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A + +M +G++ + +G FI + ++ ++ ++ + ++ +VI ++
Sbjct: 540 AKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDML--SSGIVPNNVIYTIL 597
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I G C EA + + PD AY + G E V K K GV
Sbjct: 598 IKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGV 657
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIV 351
P Y I G E I +A +L + ++ + V N LI + + + A
Sbjct: 658 VPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARE 717
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY-----KVLSANDYF--------- 397
F+ + EK VP + T S + CK E +++ K +S + Y
Sbjct: 718 LFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCG 777
Query: 398 --------------------TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ ++N ++ C G++ EA + +M K L P++
Sbjct: 778 KEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVT 837
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
Y L++A + +++ A++L+ M N TY L+ ++++G + LF +M
Sbjct: 838 YTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDME 897
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+G+A DA Y + C+E A ++ NKS+ + L + + LC+
Sbjct: 898 ARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKE 953
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 128/538 (23%), Positives = 225/538 (41%), Gaps = 51/538 (9%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWASQQ---PNFTHSPLSYHSILK-SLSLSRQINA 102
L+P +V V+ + FF W+S + P + HS +SIL L S I+
Sbjct: 83 LNPEIVCSVLQKSEIDDSVRLQNFFYWSSSKMSTPQYLHS----YSILAIRLCNSGLIHQ 138
Query: 103 IDSVL-KQVKVNKITLDSSVYRFIIPSLIQ-----GKNTQKAFSVF----------NE-- 144
D++L K ++ K L+ I+ SL++ G + F +F NE
Sbjct: 139 ADNMLEKLLQTRKPPLE------ILDSLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEAS 192
Query: 145 ---VKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+ E P + CN+L+ L + K++ M + + I
Sbjct: 193 SVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAH 252
Query: 200 CENAKLGQVLS---MLDEVRK--RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
C K+G V+ +L E+ K + N + I G C+ V+EA +V +
Sbjct: 253 C---KVGDVIKGKMVLSEMEKECKPNLFTYNAFIG-----GLCQTGAVDEALEVKKLMME 304
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
+ PD Y ++ + F E +++ + G+ P Y I G I E I E
Sbjct: 305 KGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEE 364
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSK 373
A + + +++ ++ NA+IG ++ + A+ FN M+ G P T + L
Sbjct: 365 ALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLID 424
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
K + + E+ + A +Y+V++S LC S L++A V+ +M R G+ P
Sbjct: 425 GYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKP 484
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+V Y +L++A +E A +L M A+G +L YN LI ++E A L
Sbjct: 485 NVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLL 544
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+M EKG+ P+A TY + + + +Q A F ++ ++ I + + C
Sbjct: 545 VDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHC 602
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 151/363 (41%), Gaps = 43/363 (11%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALK 175
D Y II SL + T++A VF +KF + P++ NSL++ +G I+ A +
Sbjct: 625 DIRAYSAIIHSLSKNGKTKEAMGVF--LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQ 682
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
++DEM H G+ + + + I C+ ++ + + DE+ +++ ++ V II G
Sbjct: 683 LYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKD--LVPDVVTYSTIIDG 740
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
+CK + EAFK+ DE+ + PD Y I+ + G++ E+ + L + +
Sbjct: 741 YCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNL-EKALSLFHEAQQKSVGS 799
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFT--------------------------I 329
+ + I ++ EA+EL + +V K T +
Sbjct: 800 LSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFL 859
Query: 330 DDDVLN---------ALIGSVSSIDPR-SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
D + N +L+ S + I R I F M +G ++ CK
Sbjct: 860 DMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEG 919
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
KS E +++ + + ++ ++ LC ++ ++ EM ++ L N
Sbjct: 920 KSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCN 979
Query: 440 SLM 442
+L+
Sbjct: 980 TLL 982
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 207/442 (46%), Gaps = 13/442 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAV--LASDGYIDNALK 175
D Y II L + +A + E+ + + P++ + V L G +D A +
Sbjct: 9 DVVTYSTIISGLCKTGKVTEALEMVEEMTE--KGVNPDVATYTIIVDRLCRAGKVDEADE 66
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+F +M RG +T+ + I C++ + + +L+E+ + N + I+ G
Sbjct: 67 LFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDN--ITYNTILSG 124
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK----KKRKLG 291
C+ +V EA + D + R PD +AY + + G V E + K RK
Sbjct: 125 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRK-- 182
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA-LIGSVSSIDPRSAI 350
VAP Y I G + EA +L + +++ + D N+ L+G + A
Sbjct: 183 VAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAE 242
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
F M++ G P +T S + C+ +E+Y+ ++ + D+ N ++ L
Sbjct: 243 EMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDML 302
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C + ++ +A+ V++EM + G PDV YN L++ C+ +L+ A +L+ M +GC+ ++
Sbjct: 303 CKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDI 362
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+Y+++++ + ++ A LF M+E+ + PD T+ L++GLC+ L A ++ +
Sbjct: 363 VSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDV 422
Query: 531 SVNHDVMLARSILSTFMISLCR 552
H+V+ +T M LCR
Sbjct: 423 MSEHNVLPDGVTCTTLMHGLCR 444
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 194/453 (42%), Gaps = 5/453 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y I+ L + +++ D + ++ + ++ Y +I L + +N ++A+ + E+
Sbjct: 47 TYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEM 106
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ N++L+ L G + A + FD M RG + + + + K+
Sbjct: 107 ASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKV 166
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ + + + + + +I GFC+ ++ +EA K+ ++ + PD + Y
Sbjct: 167 AEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYN 226
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ ++ E E + KK G AP Y + G + EL E +
Sbjct: 227 SILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEK 286
Query: 326 KFTIDDDVLNALIG---SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+F+ D + NA+I +D + M + G VP + T + L LCK N D
Sbjct: 287 RFSPDVLLCNAVIDMLCKAKKVDDAHKV--LEEMSKIGAVPDVVTYNILLDGLCKTNLVD 344
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
+ E++ + N D+ SY+V+++ LC + ++ +A + M + L PDV +N LM
Sbjct: 345 KAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILM 404
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+ C+ L AK L D M + T L+ + A+RLF M+EKG
Sbjct: 405 DGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTV 464
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
D + +L GLC+E L A F V D
Sbjct: 465 ADVLPHNIVLAGLCREGKLAQALLFFKSMVKSD 497
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 190/461 (41%), Gaps = 53/461 (11%)
Query: 65 SLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKV--NKITLDSS 120
S A FF+ P+ +SP ++Y+ +L +L ++ + K + + K+ D
Sbjct: 132 SEAKQFFD---SMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLI 188
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
Y +I + + T +A +F +V NS+L LA +D A +MF +M
Sbjct: 189 TYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKM 248
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
G + + + + C + + L + +E+ ++ S ++ +I CK K
Sbjct: 249 VDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFS--PDVLLCNAVIDMLCKAK 306
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+V++A KVL+E+ K+G P Y
Sbjct: 307 KVDDAHKVLEEMS-----------------------------------KIGAVPDVVTYN 331
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTID----DDVLNALIGSVSSIDPRSAIVFFNFM 356
+ GL + +A EL +V D VLN L + D R V F+ M
Sbjct: 332 ILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDAR---VLFDRM 388
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
IE+ VP + T + L LCK K DE ++ V+S ++ D + ++ LC R
Sbjct: 389 IERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRT 448
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC--SGNLKTYN 474
EA + Q M KG DV +N ++ CRE L A + M S S ++ TY
Sbjct: 449 DEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYT 508
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L++ E G ++ A+ F M G APD Y +L+ GL
Sbjct: 509 TLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGL 549
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 2/200 (1%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M EKG P ++T + + LC+ K DE E++ + + +YN +++ LC
Sbjct: 36 MTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDEN 95
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ AY +++EM KG +PD YN+++ CR + AK+ +D M + G S ++ YN
Sbjct: 96 IERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNG 155
Query: 476 LISKFSEVGEIEGALRLFH--NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
L+ + G++ A LF +M ++ VAPD TY +L++G C+ A ++F +
Sbjct: 156 LLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIA 215
Query: 534 HDVMLARSILSTFMISLCRR 553
M ++ ++ L R+
Sbjct: 216 KGYMPDTVTYNSILLGLARK 235
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 102/199 (51%), Gaps = 2/199 (1%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M EKG P + T S + LCK K E +E+ + ++ D+ +Y ++V LC +G+
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ EA + +M +G + YN+L+ C+++ + A KL ++M + G + TYN
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
++S +G++ A + F +M +G +PD Y LL+ L +E + A+ +F D
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 536 VMLARSILS--TFMISLCR 552
+A +++ T + CR
Sbjct: 181 RKVAPDLITYNTLIDGFCR 199
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/209 (16%), Positives = 86/209 (41%), Gaps = 4/209 (1%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY +L L + +++ + ++ K+ D + ++ L + +A + +
Sbjct: 363 VSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDV 422
Query: 145 VKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ + ++ P+ C +L+ L D D A+++F M +G + + + C
Sbjct: 423 MSEH--NVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCRE 480
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
KL Q L + K + V +++ + RV++A ++ C PD++
Sbjct: 481 GKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYV 540
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
AY + + G + + + + ++ G
Sbjct: 541 AYNTLMNGLRKQGRHIQADRLTQAMKEKG 569
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 143/567 (25%), Positives = 237/567 (41%), Gaps = 58/567 (10%)
Query: 22 NRTRPARKWTPL-LEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNF 80
N T R P L+Q L L +SP + +++ L S+ L F A Q +
Sbjct: 39 NETEWERLLKPFDLKQLRRSLSLT-PISPFQLCKLLELPLDIPTSMEL--FQRAGAQKGY 95
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSL----IQGKNTQ 136
+H+ + + ++ L I+ +LKQ+K + S++ I+ + G+ T+
Sbjct: 96 SHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATR 155
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
++ ++C+ N +L +L A +F +M RGV + FGV +
Sbjct: 156 LLLDMWG--VYSCDPTFKSY-NVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVM 212
Query: 197 WKFCENAKLGQVLSMLDEVRKR---ENSMINGSVIAVL---------------------- 231
C +++ S+L ++ K NS+I ++I L
Sbjct: 213 KALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCE 272
Query: 232 --------IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
+IHG C+ R+ EA K+LD + +R D + Y + MG V E +
Sbjct: 273 PDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARAL 332
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL--GEVIVSGKFTIDDDVLNALI-GS 340
L K P T Y I G + R EAK+L ++++G + D N +I G
Sbjct: 333 LNKIPN----PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAG-YEPDAYTFNIMIDGL 387
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
V SA+ N M+ K P + T + L CK+ + +E E+ +SA +
Sbjct: 388 VKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNT 447
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
YN ++ LC G + EA + EM KG PD+ +NSL+ C+ + A L+
Sbjct: 448 VGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHD 507
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
MF G N TYN L+ F I+ A +L ML +G D TY L++ LC+
Sbjct: 508 MFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGA 567
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFM 547
++ +F + ML + I T +
Sbjct: 568 VEKGLGLFEE------MLGKGIFPTII 588
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 209/448 (46%), Gaps = 10/448 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
++ ++K+L + ++++ S+L+ + + +S +Y+ +I +L + +A + ++
Sbjct: 207 TFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDM 266
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
C + + N ++ L G I A K+ D M RG + +G + C ++
Sbjct: 267 FLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLC---RM 323
Query: 206 GQVLSMLDEVRKRENSMIN-GSVIAVLIIHGFCKGKRVEEAFKVL-DELRIRECKPDFIA 263
GQV DE R N + N +V+ +I G+ R EEA +L + + I +PD
Sbjct: 324 GQV----DEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYT 379
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+ I+ + G + +L + P Y I G + R+ EA E+ +
Sbjct: 380 FNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMS 439
Query: 324 SGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+ +++ N LI ++ + A+ F M KG P + T ++L LCK +K +
Sbjct: 440 AKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKME 499
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E + +Y + + +YN +V +++A+ ++ EM +G D YN L+
Sbjct: 500 EALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLI 559
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+A C+ + L+++M G + + NILIS G++ AL+ +M+ +G+
Sbjct: 560 KALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLT 619
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNK 530
PD TY SL+ GLC+ ++Q A +FNK
Sbjct: 620 PDIVTYNSLINGLCKMGHVQEASNLFNK 647
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 212/457 (46%), Gaps = 11/457 (2%)
Query: 82 HSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
H P ++ ++++ L + +I + ++ + Y +I L + N++ A
Sbjct: 140 HQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAI 199
Query: 140 SVFNE-VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+ V+ NCE P + N+++ L D ++ AL +F EM +G+ + + I
Sbjct: 200 RLLRSMVQKNCE---PNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSII 256
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C+ ++ V ++++E+ ++ ++ VI ++ CK V A V+D + R
Sbjct: 257 HGLCKFSEWKHVATLMNEMV--DSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRG 314
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
+PD + Y + + L + E + V + G AP Y I G +RI +A
Sbjct: 315 VEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAM 374
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
L E + + + N LI + + R AI F+ M+ G++P L T L L
Sbjct: 375 YLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYL 434
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
CK D+ + + K + ++ D++SYN+++ +C G L A + + KGL PDV
Sbjct: 435 CKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDV 494
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y ++ C + LL A KL+ +M GCS + TYN++ F E A++L
Sbjct: 495 WTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQE 554
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
ML +G + DA+T T ++E L + Q+ ++ ++ V
Sbjct: 555 MLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFV 591
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 164/366 (44%), Gaps = 7/366 (1%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
ID AL F+ M H S + F + VLS+ K+ +S+ S +
Sbjct: 55 IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSL----SKQMDSLGIPSDVY 110
Query: 230 VL--IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
L +I+ FC RV+ F VL ++ +PD + + + G + E + K
Sbjct: 111 TLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKM 170
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDP 346
G P Y I GL A L +V + N +I +
Sbjct: 171 VGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQV 230
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A+ F+ MI KG P +ST +++ LCK ++ + + + + ++ + +
Sbjct: 231 NEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTL 290
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
V LC G + A+ V+ M ++G++PDV Y +LM+ C + A K++D M GC
Sbjct: 291 VDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGC 350
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ N+ +Y+ LI+ + ++ I+ A+ LF M ++ + P+ TY +L+ GLC L+ A
Sbjct: 351 APNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIA 410
Query: 527 VFNKSV 532
+F++ V
Sbjct: 411 LFHEMV 416
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 111/221 (50%), Gaps = 1/221 (0%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPT-LSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
++ S++++ S ++ + ++ +P+ + TL+ + + C N+ D V +
Sbjct: 80 ILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLG 139
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ D ++ ++ LC G++ EA + +M +G P+ Y +L+ C+ R A
Sbjct: 140 HQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAI 199
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L M C N+ TYN +I + ++ AL +F M+ KG++P+ +TY S++ GL
Sbjct: 200 RLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGL 259
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
C+ + + + N+ V+ +M I +T + +LC+ ++
Sbjct: 260 CKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMV 300
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 91/183 (49%), Gaps = 6/183 (3%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P +T + L + LC K E + ++ + + + +Y ++ LC G R A
Sbjct: 139 GHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAA 198
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+++ M +K +P+V YN++++ ++ + A ++ +M A G S N+ TYN +I
Sbjct: 199 IRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHG 258
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ E + L + M++ + P+ +T+L++ LC+E + A +V DVM+
Sbjct: 259 LCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVV------DVMIQ 312
Query: 540 RSI 542
R +
Sbjct: 313 RGV 315
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 97/204 (47%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ FN M+ P++ + + ++ ++ + K + + +D+ + ++++
Sbjct: 58 ALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVIN 117
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C R+ + V+ ++ + G PD + + +L+ C E + A L+D+M G
Sbjct: 118 SFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQP 177
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N TY LI +VG A+RL +M++K P+ TY ++++ L ++ + A +F
Sbjct: 178 NGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIF 237
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
++ + + S ++ + LC+
Sbjct: 238 SEMIAKGISPNVSTYNSIIHGLCK 261
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 132/501 (26%), Positives = 216/501 (43%), Gaps = 54/501 (10%)
Query: 51 LVARVINPYLLTHHSLALGFFNW-----ASQQPNFTHSP-----LSYHSILKSLSLSRQI 100
LV + P ++ L GFFN+ AS+ S +Y++++ QI
Sbjct: 104 LVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNQI 163
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF-NCEDIGPEICNS 159
A VL ++K D Y +I SL + A +V +++ NC P +
Sbjct: 164 EAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCM---PTVITY 220
Query: 160 LLAVLAS--DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
+ + A+ +G I+ A+K+ +EM RG+ +
Sbjct: 221 TILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNA----------------------- 257
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
II G CK VE A +++ L + C+PD I+Y I+ F G
Sbjct: 258 --------------IIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKW 303
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E E ++ + G P Y I L RI EA + +V++ + T D + L
Sbjct: 304 DEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPL 363
Query: 338 IGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I ++ AI ++MI G +P + + + LCK +++ +E++ L
Sbjct: 364 ISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGC 423
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ SYN M+S L + G A G++ M KG+DPD YNSL+ CR+ L+ A
Sbjct: 424 PPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIG 483
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L D M SG + +YNI++ +V I+ A+ +F M+EKG P+ TTY L+EG+
Sbjct: 484 LLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIG 543
Query: 517 QETNLQAAFEVFNKSVNHDVM 537
A E+ N + DV+
Sbjct: 544 FAGWRTEAMELANSLFSRDVI 564
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 140/326 (42%), Gaps = 35/326 (10%)
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
++ +I GF K +E+A +V++ L +PD AY V F + + VL +
Sbjct: 114 ILCTKLIKGFFNFKNIEKASRVMEILE-SHTEPDVFAYNAVISGFCKVNQIEAATQVLNR 172
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP 346
+ G P Y I L C ++LG
Sbjct: 173 MKARGFLPDIVTYNIMIGSL------CNRRKLG--------------------------- 199
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A+ + ++ +PT+ T + L + +E +++ + + A DM +YN +
Sbjct: 200 -LALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAI 258
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ +C G + A +I + KG +PDV YN L+ A + +KL +MF+ GC
Sbjct: 259 IRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGC 318
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
N TY+ILIS G I+ A+ + M+EK + PD +Y L+ LC+E L A
Sbjct: 319 EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG 378
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+ + +++ + +T + +LC+
Sbjct: 379 IMDYMISNGCLPDIVNYNTILAALCK 404
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 220/486 (45%), Gaps = 11/486 (2%)
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
F WA Q + HS Y+ ++ L + ID +L Q+K I S++ I+
Sbjct: 91 FKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYG 150
Query: 131 QGKNTQKAFSVFNEVK--FNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVE 186
+ +A + ++K + CE P N +L VL A +F +M +GV
Sbjct: 151 RAGLPGQATRLLLDMKGVYCCE---PSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVS 207
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
+ FG+ + C ++ +L ++ K + + S+I +I K RV+EA
Sbjct: 208 PNDYTFGLVMKALCMVNEVDNACLLLRDMTK--HGCVPNSMIYQTLIDALSKRDRVDEAL 265
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
K+L+E+ + C PD + V F + V E ++ + G P Y + GL
Sbjct: 266 KLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGL 325
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
RI EA+ L + + ++N + + ++ +A V ++ MI G VP +
Sbjct: 326 CKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRN-GRLNEATAFV-YDKMINNGYVPDVF 383
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T S L LCK+ +E+ + A ++ +Y +++ C G+L EA +++EM
Sbjct: 384 TFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREM 443
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
KG + YN+L+ A C+ + A ++ +M + GC ++ T+N LI V E+
Sbjct: 444 LTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEM 503
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
E AL L+ +M+ +GV ++ T+ +L+ + +Q A ++ N + L +
Sbjct: 504 EDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGL 563
Query: 547 MISLCR 552
+ +LC+
Sbjct: 564 IKALCK 569
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/476 (21%), Positives = 213/476 (44%), Gaps = 22/476 (4%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
++ ++K+L + +++ +L+ + + +S +Y+ +I +L + +A + E+
Sbjct: 212 TFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEM 271
Query: 146 -KFNCEDIGPEICNSLLAVLASDGYIDNAL---KMFDEMSHRGVEFSTIGFGVFIWKFCE 201
C P N+ V+ ++ L K+ D M +G + + +G + C+
Sbjct: 272 FLMGC----PPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCK 327
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK-VLDELRIRECKPD 260
++ + ++L +V N +++GF + R+ EA V D++ PD
Sbjct: 328 TCRIDEAQALLSKVPGPNVVHFN------TLVNGFVRNGRLNEATAFVYDKMINNGYVPD 381
Query: 261 FIAYRIVAEEF---KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
+ + L GS E + K G P N Y I G + ++ EA
Sbjct: 382 VFTFSTLVNGLCKKGLFGSALELVNDMDAK---GCKPNLNTYTILIDGFCKKGQLEEAGL 438
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+ +++ F+++ NALI ++ A+ F M KG P + T ++L LC
Sbjct: 439 ILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLC 498
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+ ++ ++ + +Y+ + + ++N ++ G ++EA ++ +M +G D
Sbjct: 499 RVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEI 558
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN L++A C+ + L+++M G + ++ T NILI+ F G++ AL +M
Sbjct: 559 TYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDM 618
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ +G +PD TY SL+ GLC+ +Q A +F K + +T + LCR
Sbjct: 619 IHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCR 674
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 186/414 (44%), Gaps = 14/414 (3%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVK-VNKITLDSSVYRFIIPSLIQGKNTQKA 138
FT + ++Y ++ L + +I+ ++L +V N + ++ V F+ G+ +
Sbjct: 311 FTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVR----NGRLNEAT 366
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
V++++ N ++L+ L G +AL++ ++M +G + + + + I
Sbjct: 367 AFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDG 426
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
FC+ +L + +L E+ + S+ +V +I CK ++ EA + E+ + CK
Sbjct: 427 FCKKGQLEEAGLILREMLTKGFSL--NTVGYNALISALCKHGKIHEALDMFGEMSSKGCK 484
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL---GVAPRTNDYREFILGLIVERRICEA 315
PD + + F L V E E L R + GV + + I + I EA
Sbjct: 485 PDIFTFNSLI--FGLC-RVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEA 541
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+L ++ +D+ N LI ++ + F MI KG P++ T + L
Sbjct: 542 LKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILING 601
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
C K +E + + + D+ +YN +++ LC GR++EA + ++++ +G+ PD
Sbjct: 602 FCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPD 661
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
YN+L+ CRE A L + +G N T+NIL+ F + EG
Sbjct: 662 SITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSEG 715
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 74/171 (43%), Gaps = 2/171 (1%)
Query: 385 VEVYKVLSAN-DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+E++K A Y Y +++ L + + ++ +MK +G+ S + +M+
Sbjct: 88 MEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMK 147
Query: 444 ACCREDLLRPAKKLW-DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
R L A +L D C + ++YN+++ A +F++ML KGV+
Sbjct: 148 YYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVS 207
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
P+ T+ +++ LC + A + H + I T + +L +R
Sbjct: 208 PNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKR 258
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 193/380 (50%), Gaps = 9/380 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N ++ VL +G + A M GV+ + + + + +C + ++ ++L +++
Sbjct: 225 NIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKR 284
Query: 218 RE---NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
++ +S GS+I+ G CK R+EEA K+ +E+ + +P + Y + + F
Sbjct: 285 QKIEPDSFTYGSLIS-----GMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNK 339
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G++ + K G++P + Y I L +E+R EA+ + + I + D
Sbjct: 340 GNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITY 399
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N LI G + + A + + M+ G PT T ++L L K+N+ E +++K +++
Sbjct: 400 NILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITS 459
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
D+ +N ++ C++ ++ A+ ++++M R + PD +N++M+ CRE +
Sbjct: 460 EGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEE 519
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A++L+D+M G + ++N LIS +S G+I+ A R+ + ML+ G P TY +L++
Sbjct: 520 ARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQ 579
Query: 514 GLCQETNLQAAFEVFNKSVN 533
GLC+ A E+ + V+
Sbjct: 580 GLCKNQEGDLAEELLKEMVS 599
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/413 (21%), Positives = 175/413 (42%), Gaps = 38/413 (9%)
Query: 119 SSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFD 178
S V+ ++I S +AF F +K E CNSLL++ + A ++
Sbjct: 151 SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA 210
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
EM ++ S F + +I+ CK
Sbjct: 211 EMFRLRIKSSVYTFNI-------------------------------------MINVLCK 233
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
++++A + + KP+ + Y + + G V + +L ++ + P +
Sbjct: 234 EGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFT 293
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMI 357
Y I G+ + R+ EA ++ E +V + N LI G + + A + + M+
Sbjct: 294 YGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEML 353
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+KG PT+ST ++L L ++DE + K + D +YN++++ C +
Sbjct: 354 KKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAK 413
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+A+ + EM G+ P Y SL+ +++ ++ A L+ ++ + G ++ +N LI
Sbjct: 414 KAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALI 473
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
++GA L +M V PD T+ ++++G C+E ++ A E+F++
Sbjct: 474 DGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDE 526
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 176/417 (42%), Gaps = 42/417 (10%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
+G + +PN ++Y++I+ S ++ A D++L +K KI DS Y
Sbjct: 244 VGHMETSGVKPNI----VTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTY----- 294
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
SL++ + G ++ A K+F+EM +G+
Sbjct: 295 ------------------------------GSLISGMCKQGRLEEASKIFEEMVQKGLRP 324
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
S + + I FC L + DE+ K+ S + + +IH +R +EA
Sbjct: 325 SAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNS--LIHALFMEQRTDEAEC 382
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
++ E++ + PD I Y I+ + + + ++ + G+ P Y + L
Sbjct: 383 MIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLS 442
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
+ R+ EA +L + I S D + NALI G S+ + + A M P
Sbjct: 443 KKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEV 502
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T + + + C+ K +E E++ + D S+N ++S G +++A+ V EM
Sbjct: 503 TFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEM 562
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
G +P V YN+L++ C+ A++L +M + G + + TY LI ++V
Sbjct: 563 LDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV 619
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 29/275 (10%)
Query: 295 RTNDYREFILGLIVERRICEAKE----LGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
+ +D R L +++ R+ K L + + G ++ L S + +S+I
Sbjct: 93 KLSDARTLCLAIVIVARLPSPKPALHLLKQALGGGTTNSIREIFEFLAASRDRLGFKSSI 152
Query: 351 VF-------------------FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
VF F M EKG +PT+ T ++L K N+++ +Y +
Sbjct: 153 VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+ + ++N+M++ LC G+L++A + M+ G+ P++ YN+++ C +
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A + M + TY LIS + G +E A ++F M++KG+ P A Y +L
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
++G C + NL A S D ML + I T
Sbjct: 333 IDGFCNKGNLDMA------SAYKDEMLKKGISPTM 361
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 139/324 (42%), Gaps = 7/324 (2%)
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R+ S++ +I C R +EAF+ ++ + P + F +
Sbjct: 143 RDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRT 202
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE-LGEVIVSGKFTIDDDVL-- 334
V+ + +L + + I L E ++ +AK+ +G + SG + +++
Sbjct: 203 EAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSG---VKPNIVTY 259
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N ++ G SS +A M + P T +L +CK+ + +E ++++ +
Sbjct: 260 NTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQ 319
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
YN ++ C G L A EM +KG+ P +S YNSL+ A E
Sbjct: 320 KGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDE 379
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A+ + ++ G S + TYNILI+ + + A L ML G+ P TYTSLL
Sbjct: 380 AECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLH 439
Query: 514 GLCQETNLQAAFEVFNKSVNHDVM 537
L ++ ++ A ++F K + V+
Sbjct: 440 VLSKKNRMKEADDLFKKITSEGVL 463
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 122/260 (46%), Gaps = 2/260 (0%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+S++ +L + ++ + + ++K+++ I+ D+ Y +I + N +KAF + +E+
Sbjct: 363 TYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEM 422
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + SLL VL+ + A +F +++ GV I F I C N+ +
Sbjct: 423 LASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNV 482
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+L ++ + + + V I+ G C+ +VEEA ++ DE++ R KPD I++
Sbjct: 483 KGAFELLKDMDRMK--VPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFN 540
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + G + + V + G P Y + GL + A+EL + +VS
Sbjct: 541 TLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSK 600
Query: 326 KFTIDDDVLNALIGSVSSID 345
T DD LI ++ ++
Sbjct: 601 GMTPDDTTYFTLIEGIAKVN 620
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 217/503 (43%), Gaps = 58/503 (11%)
Query: 51 LVARVINPYLLTHHSLALGFFNW-----ASQQPNFTHSP-----LSYHSILKSLSLSRQI 100
LV + P ++ L GFFN+ AS+ S +Y++++ +I
Sbjct: 94 LVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRI 153
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF-NCEDIGPEICNS 159
A VL ++K D Y +I SL + A V +++ NC P +
Sbjct: 154 EAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCM---PTVITY 210
Query: 160 LLAVLAS--DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
+ + A+ +G I+ A+K+ +EM RG+ +
Sbjct: 211 TILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNA----------------------- 247
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
II G CK VE A +++ L + CKPD I+Y I+ F G
Sbjct: 248 --------------IIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKW 293
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E E ++ + G P Y I L RI EA + +V++ + T D + L
Sbjct: 294 DEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPL 353
Query: 338 IGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
I ++ +D AI ++MI G +P + + + LCK +++ +E++ L
Sbjct: 354 ISALCKEGRLD--LAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGM 411
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ SYN M+S L + G A G++ M KG+DPD YNSL+ CR+ L+ A
Sbjct: 412 GCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEA 471
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
L D M SG + +YNI++ +V I+ A+ +F M+EKG P+ TTY L+EG
Sbjct: 472 IGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEG 531
Query: 515 LCQETNLQAAFEVFNKSVNHDVM 537
+ A E+ N + DV+
Sbjct: 532 IGFAGWRTEAMELANSLFSRDVI 554
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 141/326 (43%), Gaps = 35/326 (10%)
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
++ +I GF K +E+A +V++ L +PD AY V F + + VL +
Sbjct: 104 ILCTKLIKGFFNFKNIEKASRVMEILE-SHTEPDVFAYNAVISGFCKVNRIEAATQVLNR 162
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP 346
+ G P Y I L C ++LG + VL+ L+
Sbjct: 163 MKARGFLPDIVTYNIMIGSL------CNRRKLGLAL---------KVLDQLL-------- 199
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
N M PT+ T + L + +E +++ + + A DM +YN +
Sbjct: 200 -----LDNCM------PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAI 248
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ +C G + A +I + KG PDV YN L+ A + +KL +MF+ GC
Sbjct: 249 IRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGC 308
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
N TY+ILIS G I+ A+ + M+EK + PD +Y L+ LC+E L A
Sbjct: 309 EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG 368
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+ + +++ + +T + +LC+
Sbjct: 369 IMDYMISNGCLPDIVNYNTILAALCK 394
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/536 (23%), Positives = 235/536 (43%), Gaps = 77/536 (14%)
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
++ L SR+++ ++ KQ+ I D Y +I L + + ++A+ +F E +
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEAR--A 58
Query: 150 EDIGPEIC--NSLLAVLASDGYIDNALKMFDEMS-HRGVEFSTIGFGVFIWKFCENAKLG 206
+ P + N+++ L G I+NAL ++D+M+ H G + + + I C + ++
Sbjct: 59 KGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVD 118
Query: 207 QVLSMLDEVRKRE--------NSMINGS-------------------------VIAVLII 233
+ +L+E+ R N+++N + LII
Sbjct: 119 KGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLII 178
Query: 234 HGFCKGKRVEEAFKVLDEL-------------------------RI------------RE 256
G CK +E AF+V+DE+ RI R
Sbjct: 179 KGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG 238
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C+P+ + Y + + M + E +L K +LG T Y + GL+ R+ +A
Sbjct: 239 CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAV 298
Query: 317 ELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ + D N LI G R A+ M+E G P++ T + L L
Sbjct: 299 VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGL 358
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR-KGLDPD 434
C+ + DE VE+ ++A + +Y+ +V LC +GR+ EA G ++M R + + P
Sbjct: 359 CRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPH 418
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V Y++L++ C+ + A + ++M +G ++ T++ILI+ + G I+ L LF
Sbjct: 419 VIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFR 478
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
M E+G PD TY +L++ LC+ + + AF++F + + + RS T + L
Sbjct: 479 GMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGL 534
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 184/417 (44%), Gaps = 12/417 (2%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
+ ++Y++++ +L + S+L+Q+ N + + II L + + AF V
Sbjct: 135 NAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVV 194
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+E+ + P++ NS+L L + I +A +F RG + + + I
Sbjct: 195 DEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLS 254
Query: 201 ENAKLGQVLSMLD---EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
+ AK+ + L +L E+ R N++ +V+ G K R+E+A VL ++R C
Sbjct: 255 KMAKMDEALQLLAKMVELGCRANTVTYSTVV-----DGLLKVGRMEDAVVVLRQMRDAGC 309
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
PD + Y + + F + E +L++ + G P Y GL R EA E
Sbjct: 310 LPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVE 369
Query: 318 LGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRV-PTLSTLSNLSKNL 375
+ + + + + ++++ G + A+ +F M V P + S L L
Sbjct: 370 ILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGL 429
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
CK K DE E + + D+ +++++++ LC +GR+ + + M +G PD+
Sbjct: 430 CKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDM 489
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
Y +L++ CR + A L+ QM + G S + T +I EV E A R+
Sbjct: 490 VTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRI 546
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 192/380 (50%), Gaps = 9/380 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N ++ VL +G + A M GV+ + + + + +C + ++ ++L +++
Sbjct: 225 NIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKR 284
Query: 218 RE---NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
++ +S GS+I+ G CK R+EEA K+ +E+ + +P + Y + + F
Sbjct: 285 QKIEPDSFTYGSLIS-----GMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNK 339
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G++ + K G++P + Y I L +E+R EA+ + + I + D
Sbjct: 340 GNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITY 399
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N LI G + + A + + M+ G PT T ++L L K+N+ E +++K +++
Sbjct: 400 NILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITS 459
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
D +N ++ C++ ++ A+ ++++M R + PD +N++M+ CRE +
Sbjct: 460 EGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEE 519
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A++L+D+M G + ++N LIS +S G+I+ A R+ + ML+ G P TY +L++
Sbjct: 520 ARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQ 579
Query: 514 GLCQETNLQAAFEVFNKSVN 533
GLC+ A E+ + V+
Sbjct: 580 GLCKNQEGDLAEELLKEMVS 599
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/413 (21%), Positives = 174/413 (42%), Gaps = 38/413 (9%)
Query: 119 SSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFD 178
S V+ ++I S +AF F +K E CNSLL++ + A ++
Sbjct: 151 SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA 210
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
EM ++ S F + +I+ CK
Sbjct: 211 EMFRLRIKSSVYTFNI-------------------------------------MINVLCK 233
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
++++A + + KP+ + Y + + G V + +L ++ + P +
Sbjct: 234 EGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFT 293
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMI 357
Y I G+ + R+ EA ++ E +V + N LI G + + A + + M+
Sbjct: 294 YGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEML 353
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+KG PT+ST ++L L ++DE + K + D +YN++++ C +
Sbjct: 354 KKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAK 413
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+A+ + EM G+ P Y SL+ +++ ++ A L+ ++ + G + +N LI
Sbjct: 414 KAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALI 473
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
++GA L +M V PD T+ ++++G C+E ++ A E+F++
Sbjct: 474 DGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDE 526
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 176/417 (42%), Gaps = 42/417 (10%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
+G + +PN ++Y++I+ S ++ A D++L +K KI DS Y
Sbjct: 244 VGHMETSGVKPNI----VTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTY----- 294
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
SL++ + G ++ A K+F+EM +G+
Sbjct: 295 ------------------------------GSLISGMCKQGRLEEASKIFEEMVQKGLRP 324
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
S + + I FC L + DE+ K+ S + + +IH +R +EA
Sbjct: 325 SAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNS--LIHALFMEQRTDEAEC 382
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
++ E++ + PD I Y I+ + + + ++ + G+ P Y + L
Sbjct: 383 MIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLS 442
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
+ R+ EA +L + I S D + NALI G S+ + + A M P
Sbjct: 443 KKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEV 502
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T + + + C+ K +E E++ + D S+N ++S G +++A+ V EM
Sbjct: 503 TFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEM 562
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
G +P V YN+L++ C+ A++L +M + G + + TY LI ++V
Sbjct: 563 LDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV 619
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 29/275 (10%)
Query: 295 RTNDYREFILGLIVERRICEAKE----LGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
+ +D R L +++ R+ K L + + G ++ L S + +S+I
Sbjct: 93 KLSDARTLCLAIVIVARLPSPKPALHLLRQALGGGTTNSIREIFEFLAASRDRLGFKSSI 152
Query: 351 VF-------------------FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
VF F M EKG +PT+ T ++L K N+++ +Y +
Sbjct: 153 VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+ + ++N+M++ LC G+L++A + M+ G+ P++ YN+++ C +
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A + M + TY LIS + G +E A ++F M++KG+ P A Y +L
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
++G C + NL A S D ML + I T
Sbjct: 333 IDGFCNKGNLDMA------SAYKDEMLKKGISPTM 361
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 137/316 (43%), Gaps = 7/316 (2%)
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
S++ +I C R +EAF+ ++ + P + F + V+
Sbjct: 151 SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA 210
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKE-LGEVIVSGKFTIDDDVL--NALI-GSV 341
+ +L + + I L E ++ +AK+ +G + SG + +++ N ++ G
Sbjct: 211 EMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSG---VKPNIVTYNTIVHGYC 267
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
SS +A M + P T +L +CK+ + +E ++++ +
Sbjct: 268 SSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAV 327
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
YN ++ C G L A EM +KG+ P +S YNSL+ A E A+ + ++
Sbjct: 328 IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI 387
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G S + TYNILI+ + + A L ML G+ P TYTSLL L ++ +
Sbjct: 388 QEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRM 447
Query: 522 QAAFEVFNKSVNHDVM 537
+ A ++F K + V+
Sbjct: 448 KEADDLFKKITSEGVL 463
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 122/260 (46%), Gaps = 2/260 (0%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+S++ +L + ++ + + ++K+++ I+ D+ Y +I + N +KAF + +E+
Sbjct: 363 TYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEM 422
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + SLL VL+ + A +F +++ GV I F I C N+ +
Sbjct: 423 LASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNV 482
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+L ++ + + + V I+ G C+ +VEEA ++ DE++ R KPD I++
Sbjct: 483 KGAFELLKDMDRMK--VPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFN 540
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + G + + V + G P Y + GL + A+EL + +VS
Sbjct: 541 TLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSK 600
Query: 326 KFTIDDDVLNALIGSVSSID 345
T DD LI ++ ++
Sbjct: 601 GMTPDDTTYFTLIEGIAKVN 620
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 212/457 (46%), Gaps = 15/457 (3%)
Query: 82 HSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
H P +SY++++ L S N V K+++ N + Y II SL + + A
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253
Query: 140 SVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
+E+ I P+ NS++ L G ++ A ++F M G + + + + I
Sbjct: 254 DFLSEMV--GRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIID 311
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
++ + L E+ + + V I+HG C ++ EA ++ ++ + C
Sbjct: 312 SLYKDRLVNDAADFLSEMV--DQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGC 369
Query: 258 KPDFIAYRIVAEEF---KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
KPD +AY + + +L+ E L + G+ P Y + G ++ E
Sbjct: 370 KPDVVAYNTIIDSLCKDRLVNDAME---FLSEMVDRGIPPNAVTYSTILHGFCNLGQLDE 426
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSK 373
A +L + +V + + L+ + S A F M EKG P + T + L
Sbjct: 427 ATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMN 486
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
C R K +E +V++++ D+ SYN++++ C S R+ +A ++ +M K L P
Sbjct: 487 GYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTP 546
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+ YN++M+ C L A++L+ +M +SG L TY+IL++ + G ++ AL+LF
Sbjct: 547 NTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLF 606
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+M EK + PD YT L+EG+ L+ A +F+K
Sbjct: 607 KSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSK 643
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 214/476 (44%), Gaps = 7/476 (1%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
TH+ S + ++ L ++ SV ++ I D + +I + + A
Sbjct: 125 THTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVE 184
Query: 141 VFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
++NE+ + + P++ N+L+ L + G + A+ +F +M G + + + + I
Sbjct: 185 LYNEMVRSGHE--PDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDS 242
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C++ + + L E+ R + ++ I+HG C ++ EA ++ + CK
Sbjct: 243 LCKDRLVNDAMDFLSEMVGR--GIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCK 300
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD + Y I+ + V + L + G+ P Y + GL ++ EA L
Sbjct: 301 PDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRL 360
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ + D N +I S+ A+ F + M+++G P T S + C
Sbjct: 361 FKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCN 420
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ DE +++K + + + +++++V LC G + EA V + M KG++P++
Sbjct: 421 LGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYT 480
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
YN+LM C + A+K+++ M GC+ +L +YNILI+ + ++ A L M
Sbjct: 481 YNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMS 540
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
K + P+ TY ++++GLC L A E+F K + ++ S + LC+
Sbjct: 541 VKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKH 596
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 138/325 (42%), Gaps = 34/325 (10%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I+G C +++ A ++ +E+ +PD I+Y + G+ V KK + G
Sbjct: 169 LINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNG 228
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
P Y I L +R + +A +
Sbjct: 229 CKPNVVTYNTIIDSLCKDRLVNDAMD---------------------------------- 254
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F + M+ +G P T +++ LC + +E ++K + N D+ +YN+++ L
Sbjct: 255 FLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLY 314
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+ +A + EM +G+ PDV Y +++ C L A +L+ +M GC ++
Sbjct: 315 KDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVV 374
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
YN +I + + A+ M+++G+ P+A TY+++L G C L A ++F +
Sbjct: 375 AYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEM 434
Query: 532 VNHDVMLARSILSTFMISLCRRVLI 556
V +VM S + LC+ ++
Sbjct: 435 VGRNVMPNTLTFSILVDGLCQEGMV 459
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 19/214 (8%)
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
S ++DD + A ++ ++PR +IV F F+ ++ ST+ L N+ D
Sbjct: 69 SNTISVDDAL--ASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLC------NQMD 120
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
+ V S N ++++ LC + A V +M + G+ PDV + +L+
Sbjct: 121 LFGVTHTVYSLN----------ILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLI 170
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
C E ++ A +L+++M SG ++ +YN LI+ G A+ +F M + G
Sbjct: 171 NGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCK 230
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
P+ TY ++++ LC++ + A + ++ V +
Sbjct: 231 PNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGI 264
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 199/433 (45%), Gaps = 5/433 (1%)
Query: 103 IDSVLKQVKVNKITLDSS--VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSL 160
I+ + + + +L SS VY +I LI+ KA E+ C+S+
Sbjct: 321 IEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSV 380
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
+ L G +D+AL + + M RG + I + C+ K+ + L + ++ +
Sbjct: 381 IQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKIS 440
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RIRECKPDFIAYRIVAEEFKLMGSVFE 279
S + +++ CK K+V +AF + + R PD ++Y I+ + F + +
Sbjct: 441 SRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGR 500
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
E + K+ L P Y F+ GL+ + RI +A+ + E +V+ + D + LI
Sbjct: 501 AEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIH 560
Query: 340 SVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
S + A F MI +G P T + L LCK +K DE E+++ +
Sbjct: 561 GFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDP 620
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D +Y ++ C G++ +A V EM KG DPDV YN L++ R AK+L+
Sbjct: 621 DRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLF 680
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM-LEKGVAPDATTYTSLLEGLCQ 517
M + C + ++NI+I S+ ++ A+ +F M + G +PD TY SL+ GLC
Sbjct: 681 QVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCG 740
Query: 518 ETNLQAAFEVFNK 530
E L A +VF +
Sbjct: 741 EQRLSEAMKVFKE 753
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 114/527 (21%), Positives = 216/527 (40%), Gaps = 48/527 (9%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL FF W Q NF H +Y+ +L L R + V +++ + + Y ++
Sbjct: 113 ALTFFRWL-QARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171
Query: 127 PSLIQGKNTQKAFSVFNEV-----------------------------KFNCEDIGPEIC 157
S +N+ +A F E+ + D+ +
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231
Query: 158 NSLL---AVLASDGYIDNAL---KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM 211
++ A+L + D A+ K+F M G + + + C+ L + +
Sbjct: 232 VEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKL 291
Query: 212 LDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR--IRECKPDF-IAYRIVA 268
E+ + +N +V + G CK ++E+AF+ ++ + +P + + R++
Sbjct: 292 FLEMAVESKAPLN-NVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLI 350
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFT 328
E G + + E + + P + I L R+ A L E ++ +
Sbjct: 351 ES----GRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYC 406
Query: 329 IDDDVLNALIGSVSSIDP-RSAIVFFNFMIEK--GRVPTLSTLSNLSKNLCKRNKSDELV 385
D + LI + D + A F M K R + + ++L +LCK K +
Sbjct: 407 PDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAF 466
Query: 386 EVYKVL-SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
++ + S + D+ SY++++ C L A + ++M P+V+ YN+ +
Sbjct: 467 AIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNG 526
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
R+ + A+ ++++M A+GCS ++ TY+ LI FS + + A LF M+ +G P+
Sbjct: 527 LMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPN 586
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
A TY LL GLC+E+ A E+F K V R +T + C
Sbjct: 587 AVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFC 633
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 190/435 (43%), Gaps = 17/435 (3%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC-NSLLAVLASDGYIDNALKM 176
D+++Y +++ + + +N +AF +F E+ + + + L+ L G I+ A +
Sbjct: 268 DATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEA 327
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
M + S + + I E+ ++ + E+ R +G+ +V I
Sbjct: 328 CRTM-QESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSV--IQEL 384
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK--KKRKLGVAP 294
CK RV+ A +L+ + R PD + ++ E + E + L+ ++ +
Sbjct: 385 CKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSS 444
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV-LNALIGSVSSIDPRS-AIVF 352
Y + L +++ +A + +VS + + D V + LI ID A
Sbjct: 445 SCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKL 504
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
+ MI+ VP ++T + L ++ + + VY+ + A D+ +Y+ ++
Sbjct: 505 YKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSL 564
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
+ + +A+ + + M +G P+ YN L+ C+E A +L+ +M GC + T
Sbjct: 565 ARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVT 624
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN--- 529
Y L+ F VG+IE A+ +F M+ KG PD Y LL+G + A ++F
Sbjct: 625 YTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMV 684
Query: 530 ------KSVNHDVML 538
+V+H++M+
Sbjct: 685 SRQCKPDTVSHNIMI 699
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 165/404 (40%), Gaps = 38/404 (9%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N S + HS+++ L + ++++ S+L+ + D + + +I L + Q+A
Sbjct: 369 NIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEA 428
Query: 139 --FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM-SHRGVEFSTIGFGVF 195
F + K + NSLL L + A +F M S R + + +
Sbjct: 429 QEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSIL 488
Query: 196 IWKFCENAKLGQVLSMLDEV--------RKRENSMING---------------SVIAV-- 230
I FC+ +LG+ + ++ N+ +NG ++A
Sbjct: 489 IDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGC 548
Query: 231 --------LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+IHGF ++ ++A ++ + + R C+P+ + Y + E
Sbjct: 549 SPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHE 608
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSV 341
+ +K + G P Y + G +I +A E+ + +VS D N L+ G
Sbjct: 609 LFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFF 668
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT-DM 400
+ P A F M+ + P + + + L K + D+ VEV++ + + + D+
Sbjct: 669 RAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDL 728
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+YN ++ LC RL EA V +E+ R L PD +N L+EA
Sbjct: 729 VTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 772
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/424 (18%), Positives = 175/424 (41%), Gaps = 49/424 (11%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
AL F + R + + + K + L Q + +++ + + NG AVL+
Sbjct: 113 ALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVA-QGVVPNGFTYAVLV 171
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
C + +EA + E+ + KP Y+ V E K G E V + + V
Sbjct: 172 -QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRV 230
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIV 351
A + ++ +++ + EA +L +V D + + ++ + ++ A
Sbjct: 231 AVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFK 290
Query: 352 FFNFMIEKGRVPTLSTLSNLS-----KNLCKRNKSDE----------------------- 383
F M + + P L+N++ LCK K ++
Sbjct: 291 LFLEMAVESKAP----LNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLI 346
Query: 384 --LVEVYKVLSANDYFTDMESYNV---------MVSFLCTSGRLREAYGVIQEMKRKGLD 432
L+E ++ A + ++ N+ ++ LC +GR+ A +++ M ++G
Sbjct: 347 RLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYC 406
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFAS--GCSGNLKTYNILISKFSEVGEIEGAL 490
PD++ ++ L+ C+ D ++ A++ M S + +YN L++ + ++ A
Sbjct: 407 PDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAF 466
Query: 491 RLFHNML-EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
+F M+ E+ PD +Y+ L++G C+ L A +++ + ++ + + + + F+
Sbjct: 467 AIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNG 526
Query: 550 LCRR 553
L R+
Sbjct: 527 LMRK 530
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
EA + ++ + DV YN L++ R L+ A +++++M A G N TY +L+
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF-EVFN----KSV 532
+ A+R F M++KG P +T Y + E L + T + F VF K V
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECL-KATGKEGEFSRVFGRDLEKRV 230
Query: 533 NHDVMLARSILSTFMI 548
++ML +++L F+I
Sbjct: 231 AVEMMLKKALLVNFVI 246
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 81/206 (39%), Gaps = 36/206 (17%)
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E + ++ L A ++ D+ +YN ++ L L++A V ++M +G+ P+ Y L+
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
++ C E A + + +M G + Y + G+ R+F LEK VA
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231
Query: 503 -----------------------------------PDATTYTSLLEGLCQETNLQAAFEV 527
PDAT Y+ ++ C+ NL AF++
Sbjct: 232 VEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKL 291
Query: 528 F-NKSVNHDVMLARSILSTFMISLCR 552
F +V L + F+ LC+
Sbjct: 292 FLEMAVESKAPLNNVAWTAFLSGLCK 317
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 94/235 (40%), Gaps = 35/235 (14%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++ SL+R+ + + + + ++ Y ++ L + +A +F +
Sbjct: 553 ITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRK 612
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ D +LL + G I+ A+++FDEM +G + + + + F K
Sbjct: 613 MVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGK 672
Query: 205 LGQVLSMLDEVRKRE--------NSMING--------SVIAVL----------------- 231
G+ + + R+ N MI+G + V
Sbjct: 673 PGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYN 732
Query: 232 -IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
+I G C +R+ EA KV E+ + PD A+ ++ E K G V++ E+ K
Sbjct: 733 SLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIKC-GIVYQFEIRFK 786
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 139/568 (24%), Positives = 243/568 (42%), Gaps = 70/568 (12%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
KW P E+ L L L+ + LV V+ + H + + FF WA ++ NF H +Y
Sbjct: 73 KWGPDAEKALEVLKLK--VDHRLVREVLKIDVEIH--VKIQFFKWAGKRRNFEHDSTTYM 128
Query: 89 S-----------------------------------ILKSLSLSRQINAIDSVLKQVKVN 113
+ I+K L ++ +N S+ Q+K
Sbjct: 129 ALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGR 188
Query: 114 KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYID 171
K S+ Y +I L+Q + +K ++NE+ N D P+ ++L+A G D
Sbjct: 189 KCKPTSNTYNSMILMLMQEGHHEKVHELYNEM-CNEGDCLPDTVTYSALIAAFGKLGRDD 247
Query: 172 NALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL 231
+A+ +FDEM G+ + + + + + ++ + L ++ E++++ G + V
Sbjct: 248 SAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEK------GCALTVY 301
Query: 232 ----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+I G K +VEEA+ + + CKPD + + G + + + ++
Sbjct: 302 TYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEM 361
Query: 288 RKLGVAPRTNDYREFILGLIVER-RICEA-------KELGEVIVSGKFTIDDDVLNALIG 339
L P Y I L + R EA KE G V S ++I D G
Sbjct: 362 ESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILID------G 415
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ A++ M EKG P + +L L K + + E+++ L N ++
Sbjct: 416 FCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSS 475
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
Y VM+ L GRL EA + EMK+ G +PDV YN+LM R + A L
Sbjct: 476 ARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLR 535
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
M +GC+ +L ++NI+++ F+ G +GA+ +F M + PD +Y ++L L +
Sbjct: 536 TMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAG 595
Query: 520 NLQAAF----EVFNKSVNHDVMLARSIL 543
+ A E+ +K +D++ SIL
Sbjct: 596 MFEEAAKLMKEMNSKGFEYDLITYSSIL 623
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 196/426 (46%), Gaps = 17/426 (3%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEI--CNSLLAVLASDGYIDNALKM 176
Y ++ L + KA+ VF E+ +D G P++ L+ G I+ ALK+
Sbjct: 167 TYNSVLKGLCRSGMWDKAWEVFKEM----DDFGVAPDVRSFTILIGGFCRVGEIEEALKI 222
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
+ EM HRG++ + F I F K+ ++ L E+R ++ VI ++I GF
Sbjct: 223 YKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCF--GLVPDGVIYTMVIGGF 280
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
C+ + +A +V DE+ C PD + Y + + + E +L + R+ GV P
Sbjct: 281 CRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDL 340
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNF 355
+ I G +E ++ +A +L + +++ + D N LI G D A ++
Sbjct: 341 CTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDD 400
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M + P T S L + C++ + ++ + ++ +YN ++ C SG
Sbjct: 401 MHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGN 460
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ + +Q+M + PD+ YN+L+ +ED + A KL + M ++ TYN+
Sbjct: 461 VSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNM 520
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI+ FS G ++ A +F M KG+ PD TY S++ G N + AF++ HD
Sbjct: 521 LINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQL------HD 574
Query: 536 VMLARS 541
ML R
Sbjct: 575 EMLQRG 580
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 175/443 (39%), Gaps = 75/443 (16%)
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
H+ K+L + + +D+V+ +++ + D + ++ + + + + A ++ + +
Sbjct: 103 HNYCKAL----EFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVS 158
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
G NS+L L G D A ++F EM GV F
Sbjct: 159 KGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSF--------------- 203
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
++I GFC+ +EEA K+ E+R R KPD +++ +
Sbjct: 204 ----------------------TILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCL 241
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
F G + L++ R G+ P Y I G C A ++S
Sbjct: 242 IGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGF------CRAG-----LMSDAL 290
Query: 328 TIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
+ D+ M+ G +P + T + L LCK + + +
Sbjct: 291 RVRDE-----------------------MVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 327
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
+ D+ ++ ++ C G+L +A + M + L PD+ YN+L++ CR
Sbjct: 328 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 387
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+ L A LWD M + N TY+ILI E G++E A M+ KG+ P+ T
Sbjct: 388 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 447
Query: 508 YTSLLEGLCQETNLQAAFEVFNK 530
Y S+++G C+ N+ + K
Sbjct: 448 YNSIIKGYCRSGNVSKGQKFLQK 470
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 148/335 (44%), Gaps = 2/335 (0%)
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
NS +N + +++ H +CK ++ V+ E+ R PD + + ++ + G
Sbjct: 90 NSEVNTYTLNIMV-HNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEA 148
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
++ G+ P Y + GL +A E+ + + D LIG
Sbjct: 149 AMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIG 208
Query: 340 SVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
+ + A+ + M +G P L + S L +R K D + + +
Sbjct: 209 GFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 268
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D Y +++ C +G + +A V EM G PDV YN+L+ C+E L A+ L
Sbjct: 269 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 328
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
++M G +L T+ LI + G+++ AL+LF ML + + PD TY +L++G+C++
Sbjct: 329 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 388
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+L A ++++ + ++ S + S C +
Sbjct: 389 GDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 423
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 189/436 (43%), Gaps = 7/436 (1%)
Query: 116 TLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALK 175
T V+ +I + Q + ++AF F + + I N+LLA L+ G+ A
Sbjct: 22 TPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAAD 81
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ + E +T + + +C+ + +V +++ E+ KR + V +++
Sbjct: 82 AYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKR--CVFPDVVTHNVMVDA 139
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
+ E A ++D + + KP + Y V + G + V K+ GVAP
Sbjct: 140 RFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPD 199
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFN 354
+ I G I EA ++ + + D + LIG + A+ +
Sbjct: 200 VRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLR 259
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M G VP + + C+ + + V + D+ +YN +++ LC
Sbjct: 260 EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 319
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
RL +A G++ EM+ +G+ PD+ + +L+ C E L A +L+D M ++ TYN
Sbjct: 320 RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 379
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF----EVFNK 530
LI G+++ A L+ +M + + P+ TY+ L++ C++ ++ AF E+ NK
Sbjct: 380 TLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 439
Query: 531 SVNHDVMLARSILSTF 546
+ ++M SI+ +
Sbjct: 440 GILPNIMTYNSIIKGY 455
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 223/481 (46%), Gaps = 24/481 (4%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
L + FF WA +Q ++H+ Y ++ + L + +L+++ + D V R +
Sbjct: 116 LCVRFFLWAERQVGYSHTGACYDALAEILGFEDPARTAERLLREIGED----DREVLRRL 171
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEIC--NSLLAVLASDGYIDNALKMFDEMS 181
+ L++ + E +D G P N+L+ VLAS G ++ ++ EMS
Sbjct: 172 LNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMS 231
Query: 182 HRG--VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
G ++ STIG+ F C+ + L+ML+ +E+ ++ +V+ +I G +
Sbjct: 232 ASGFCMDRSTIGY--FAQALCKVGRWADALNMLE----KEDFNLD-TVLCTQMISGLMEA 284
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
EA L +R C P+ + YR + F + ++ G P + +
Sbjct: 285 SLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLF 344
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID--PRSAIV-----F 352
+ G A +L + + N IGS+ + P + ++
Sbjct: 345 NSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKV 404
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
+ M+ V +N S+ LC K ++ ++ K + + D +Y +++FLC
Sbjct: 405 YEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQ 464
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
+ ++ +++ + QEMKR G++PDV Y L+++ C+ L+ A+ +D+M + GCS N+ T
Sbjct: 465 AKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVT 524
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
Y L+ + + ++ A +FH M++ P+A TY++L++GLC+ +Q A EV+ K +
Sbjct: 525 YTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLI 584
Query: 533 N 533
Sbjct: 585 G 585
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/487 (21%), Positives = 194/487 (39%), Gaps = 58/487 (11%)
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSL 160
N S L +++ N + YR ++ ++ K + N + + P + NSL
Sbjct: 288 NEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSL 347
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
+ + G A K+F+ M+ G + + +FI C +L +LD V K
Sbjct: 348 VHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNA-ELLDLVEKVYE 406
Query: 221 SMINGS--------------------------VIAVLIIHGF--------------CKGK 240
M+ S ++ ++ GF C+ K
Sbjct: 407 EMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAK 466
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+VE++F + E++ PD Y I+ + F G + + + R +G +P Y
Sbjct: 467 KVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYT 526
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP--RSAIVFFNFMIE 358
+ + +++ +A ++ +V + +ALI + ++ V+ +
Sbjct: 527 ALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGT 586
Query: 359 KGRV---------------PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
G V P + T L LCK K + E+ + A + Y
Sbjct: 587 SGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVY 646
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+ ++ C G++ A V M + G P V Y SL++ ++ L A K+ +M
Sbjct: 647 DALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLN 706
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
C+ N+ TY +I S+VGEIE AL L M EKG +P+ TYT+L++GL + A
Sbjct: 707 DSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADA 766
Query: 524 AFEVFNK 530
+ ++F +
Sbjct: 767 SLKLFKQ 773
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 149/379 (39%), Gaps = 21/379 (5%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L G + A ++ EM +G T + I C+ K+ + + E+++ + +
Sbjct: 427 LCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKR---AGV 483
Query: 224 NGSVIA-VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
N V ++I FCK +E+A DE+R C P+ + Y + + + +
Sbjct: 484 NPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHD 543
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD---------- 332
+ + P Y I GL I +A E+ E ++ ++ D
Sbjct: 544 IFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCT 603
Query: 333 ------VLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
ALI + S A + M+ G P L CK K D
Sbjct: 604 IAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQ 663
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
EV+ ++ Y + +Y ++ + GRL A V+ EM +P+V Y ++++
Sbjct: 664 EVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGL 723
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
+ + A L M GCS N+ TY LI + G+ + +L+LF M KG AP+
Sbjct: 724 SKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNY 783
Query: 506 TTYTSLLEGLCQETNLQAA 524
TY L+ C L A
Sbjct: 784 VTYRVLINHCCAAGLLDEA 802
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/480 (21%), Positives = 205/480 (42%), Gaps = 59/480 (12%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS--LLAV 163
+LK++ D+S Y +I L Q K +K+F +F E+K + P++ L+
Sbjct: 439 ILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKR--AGVNPDVYTYTILIDS 496
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV--------------- 208
G I+ A FDEM G + + + + + ++ +L Q
Sbjct: 497 FCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPN 556
Query: 209 ----------LSMLDEVRK-----------------------RENSMINGSVIAV-LIIH 234
L E++K + I +V+ +I
Sbjct: 557 AVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALID 616
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
G CK ++V +A ++LD + C+P+ I Y + + F +G + + V + K G P
Sbjct: 617 GLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLP 676
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFF 353
+ Y I + + R+ A ++ +++ + A+I +S + + A+
Sbjct: 677 SVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLL 736
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
+ M EKG P + T + L L K K+D ++++K +++ + +Y V+++ C +
Sbjct: 737 SLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAA 796
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G L EA+ ++ EMK + Y+ ++ ++ + + L ++M + Y
Sbjct: 797 GLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFI--ASLGLLEEMESHETVPIAPVY 854
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATT---YTSLLEGLCQETNLQAAFEVFNK 530
+LI FS+ G +E AL L ++E + + T+ Y SL++ LC + ++ AF ++ +
Sbjct: 855 GMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTE 914
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 121/296 (40%), Gaps = 18/296 (6%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
++L+ G IDNA ++F M+ G S + I + ++ +L + +L E+
Sbjct: 647 DALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEML- 705
Query: 218 RENSMINGSVIA-VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
N N +V+ +I G K +E+A +L + + C P+ + Y + + G
Sbjct: 706 --NDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGK 763
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE---VIVSGKFTIDDDV 333
+ K+ G AP YR I C A L E ++ K T
Sbjct: 764 ADASLKLFKQMNSKGCAPNYVTYRVLI------NHCCAAGLLDEAHLLLDEMKHTHWPKH 817
Query: 334 LNALIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
L +V + +++ M VP L + K + + +E++K L
Sbjct: 818 LQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKEL 877
Query: 392 ---SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
S++ T Y ++ LC + ++ EA+ + EM RKG+ PD+ + SL++
Sbjct: 878 VEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKG 933
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 139/568 (24%), Positives = 243/568 (42%), Gaps = 70/568 (12%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
KW P E+ L L L+ + LV V+ + H + + FF WA ++ NF H +Y
Sbjct: 73 KWGPDAEKALEVLKLK--VDHRLVREVLKIDVEIH--VKIQFFKWAGKRRNFEHDSTTYM 128
Query: 89 S-----------------------------------ILKSLSLSRQINAIDSVLKQVKVN 113
+ I+K L ++ +N S+ Q+K
Sbjct: 129 ALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGR 188
Query: 114 KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYID 171
K S+ Y +I L+Q + +K ++NE+ N D P+ ++L+A G D
Sbjct: 189 KCKPTSNTYNSMILMLMQEGHHEKVHELYNEM-CNEGDCLPDTVTYSALIAAFGKLGRDD 247
Query: 172 NALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL 231
+A+ +FDEM G+ + + + + + ++ + L ++ E++++ G + V
Sbjct: 248 SAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEK------GCALTVY 301
Query: 232 ----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+I G K +VEEA+ + + CKPD + + G + + + ++
Sbjct: 302 TYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEM 361
Query: 288 RKLGVAPRTNDYREFILGLIVER-RICEA-------KELGEVIVSGKFTIDDDVLNALIG 339
L P Y I L + R EA KE G V S ++I D G
Sbjct: 362 ESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILID------G 415
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ A++ M EKG P + +L L K + + E+++ L N ++
Sbjct: 416 FCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSS 475
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
Y VM+ L GRL EA + EMK+ G +PDV YN+LM R + A L
Sbjct: 476 ARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLR 535
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
M +GC+ +L ++NI+++ F+ G +GA+ +F M + PD +Y ++L L +
Sbjct: 536 TMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAG 595
Query: 520 NLQAAF----EVFNKSVNHDVMLARSIL 543
+ A E+ +K +D++ SIL
Sbjct: 596 MFEEAAKLMKEMNSKGFEYDLITYSSIL 623
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 133/520 (25%), Positives = 236/520 (45%), Gaps = 29/520 (5%)
Query: 46 SLSPSLVARVI----NPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQIN 101
+L P VA V+ NP AL FN ++ F H+ L+Y +++ L +
Sbjct: 4 ALLPKHVAAVVKYQKNPLK------ALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFE 57
Query: 102 AIDSVLKQVKVN-KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF-NCEDIGPEI--C 157
A++ VL + ++N L VY + + + Q+A VF + F NCE P +
Sbjct: 58 AMEEVLAETRMNIDNGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCE---PSVQSY 114
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++ +L Y D A K++ M +G+ F + + FC ++ +L+ +
Sbjct: 115 NAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPS 174
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + +V +I GF + EA ++ +E+ PD +A+ + G V
Sbjct: 175 Q--GCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHV 232
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E E +L K K GV+P FI G + EA L + + G T D N L
Sbjct: 233 QESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGRG-LTPDVITYNTL 291
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G + A + M+ +G P T +++ CK ++ + + +
Sbjct: 292 ICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGF 351
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D +Y +++ LC G + A V E KGL P++ N+L++ ++ L+ A K
Sbjct: 352 VPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALK 411
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L ++M +GCS ++ TYN++I+ ++G + A L + + KG PD T+ +L++G C
Sbjct: 412 LMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYC 471
Query: 517 QETNLQAAFEVFNKSVNH----DVMLARSILSTFMISLCR 552
++ L A E+ ++ NH DV+ SIL+ LC+
Sbjct: 472 KKLKLDNAIEIVDRMWNHGVSPDVITYNSILN----GLCK 507
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 195/461 (42%), Gaps = 17/461 (3%)
Query: 91 LKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCE 150
+KS + + +A +L + + Y +I + + +A +F E+
Sbjct: 153 MKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEM----- 207
Query: 151 DIGPEIC------NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+G IC N L+ L G++ + ++ +++ RGV + +FI FC+ A
Sbjct: 208 -LGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAM 266
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + + +LD V + + + +I G CK +V EA L ++ +PD Y
Sbjct: 267 LNEAIRLLDGVGR---GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTY 323
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + + +G + + +L+ G P + Y I GL + I A + +
Sbjct: 324 NSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAME 383
Query: 325 GKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ + N L+ +S A+ N M E G P + T + + LCK +
Sbjct: 384 KGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSD 443
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ A + D+ ++N ++ C +L A ++ M G+ PDV YNS++
Sbjct: 444 ADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILN 503
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C+ + M GC N+ TYNIL F + ++E AL L M KG+ P
Sbjct: 504 GLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTP 563
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILS 544
D + +L++G C +L A+++F K V+ + +I +
Sbjct: 564 DVVNFGTLMKGFCDNGDLDGAYQLF-KRVDEQYKFSHTIAT 603
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 208/468 (44%), Gaps = 12/468 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY++I+ L R + V +++ I D + + S + A + N +
Sbjct: 113 SYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNM 172
Query: 146 KF-NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
CE C +++ + + A ++F+EM G+ + F I C
Sbjct: 173 PSQGCESSAVAYC-TVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGH 231
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ + +L++V KR ++ ++ V + I GFC+ + EA ++LD + R PD I
Sbjct: 232 VQESERLLNKVLKRG---VSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVG-RGLTPDVIT 287
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + V E E L+K G P Y I G + A ++
Sbjct: 288 YNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGA 347
Query: 324 SGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
F D+ +LI G D AI FN +EKG P L + L K L ++
Sbjct: 348 FKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLIL 407
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
+ +++ +S N D+ +YN++++ LC G + +A ++ + KG PDV +N+L+
Sbjct: 408 QALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLI 467
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+ C++ L A ++ D+M+ G S ++ TYN +++ + G+ E + F M+EKG
Sbjct: 468 DGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCV 527
Query: 503 PDATTYTSLLEGLCQETNLQAAF----EVFNKSVNHDVMLARSILSTF 546
P+ TY L E C+ ++ A E+ NK + DV+ +++ F
Sbjct: 528 PNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGF 575
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 180/404 (44%), Gaps = 12/404 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L + + A +M + G E + I +C KLG + + +R
Sbjct: 289 NTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYC---KLGMMQNADQILRD 345
Query: 218 RE-NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+ +I+G C+ ++ A V +E + KP+ + + + G
Sbjct: 346 GAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGL 405
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ + ++ + + G +P Y I GL + +A L ++ D N
Sbjct: 406 ILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNT 465
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G + +AI + M G P + T +++ LCK K ++++ +K++
Sbjct: 466 LIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKG 525
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
++ +YN++ C + ++ EA +I+EM+ KGL PDV + +LM+ C L A
Sbjct: 526 CVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAY 585
Query: 456 KLW---DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
+L+ D+ + S + TYNI+I+ F+ + A +LF+ M E G +PD+ TY ++
Sbjct: 586 QLFKRVDEQYKF--SHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMI 643
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC--RRV 554
+G C+ N+ + + + ++ + + + LC RRV
Sbjct: 644 DGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRV 687
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 167/390 (42%), Gaps = 12/390 (3%)
Query: 173 ALKMFDEMSHR-GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR-ENSMINGSVIAV 230
AL++F+ + G + + + + I K + + + +L E R +N ++ G I
Sbjct: 23 ALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVYIGA 82
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE---EFKLMGSVFEREVVLKKK 287
+ +G KGK ++EA V + + C+P +Y + E++ + V +
Sbjct: 83 MRNYGR-KGK-IQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHK---VYMRM 137
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR 347
R G+ P + + R A+ L + S +IG + R
Sbjct: 138 RDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHR 197
Query: 348 -SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A F M+ G P + + L LC++ E + + ++ + N+
Sbjct: 198 VEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIF 257
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ C L EA ++ + R GL PDV YN+L+ C+ + A+ +M G
Sbjct: 258 IQGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGY 316
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ TYN +I + ++G ++ A ++ + KG PD +TY SL+ GLCQ+ ++ A
Sbjct: 317 EPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAIN 376
Query: 527 VFNKSVNHDVMLARSILSTFMISLCRRVLI 556
VFN+++ + + +T + L ++ LI
Sbjct: 377 VFNEAMEKGLKPNLVLCNTLVKGLSQQGLI 406
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/442 (22%), Positives = 171/442 (38%), Gaps = 54/442 (12%)
Query: 52 VARVINPYLLTHHSLALGFF---------NWASQQPNFTHSP--LSYHSILKSLSLSRQI 100
V R + P ++T+++L G ++ + N + P +Y+SI+ +
Sbjct: 277 VGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMM 336
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSL 160
D +L+ D S Y +I L Q + +A +VFNE +CN+L
Sbjct: 337 QNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTL 396
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVE------------FSTIG----------------- 191
+ L+ G I ALK+ +EMS G IG
Sbjct: 397 VKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGH 456
Query: 192 ------FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEE 244
F I +C+ KL + ++D + N ++ VI I++G CK + E+
Sbjct: 457 LPDVFTFNTLIDGYCKKLKLDNAIEIVDRMW---NHGVSPDVITYNSILNGLCKAGKYED 513
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
+ + C P+ I Y I+ E F V E ++++ + G+ P ++ +
Sbjct: 514 VMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMK 573
Query: 305 GLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSS-IDPRSAIVFFNFMIEKGRV 362
G + A +L V KF+ N +I + + ++ A FN M E G
Sbjct: 574 GFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFS 633
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P T + CK + V + ++ +++ LC R+ EA G+
Sbjct: 634 PDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGI 693
Query: 423 IQEMKRKGLDPDVSFYNSLMEA 444
I M KG+ P+V N++ EA
Sbjct: 694 IHLMVHKGIVPEV--VNTIFEA 713
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 177/382 (46%), Gaps = 5/382 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
++LL L+S I +A+K+FDEM G E I + I C K+G + ++K
Sbjct: 51 STLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLC---KMGSTTMAIQLLKK 107
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E +V+ II CK K + EA + L E+ R P+ + Y + F +G
Sbjct: 108 MEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGR 167
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
E + K+ + V P T + + GL E I EA+ + E ++ + + NA
Sbjct: 168 SNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNA 227
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
L+ G S A FN M+ KG P++ + + L K CK + DE + +S
Sbjct: 228 LMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKA 287
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D +Y+ ++ C GR ++A +++EM+ GL PD+ Y+ +++ C++ L A
Sbjct: 288 LTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAF 347
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L M S N+ Y ILI G++E A LF N+ KG+ PD TYT ++ GL
Sbjct: 348 ELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGL 407
Query: 516 CQETNLQAAFEVFNKSVNHDVM 537
+ A E+F H +
Sbjct: 408 LKGGLSNEACELFRDMAVHGCL 429
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 148/322 (45%), Gaps = 34/322 (10%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+++G ++ +A K+ DE+ +PD I Y + MGS +LKK + G
Sbjct: 53 LLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKG 112
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
P Y I L ++ I EA E
Sbjct: 113 CKPNVVVYSTIIDSLCKDKLITEAME---------------------------------- 138
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F + M+ +G P + T S++ C +S+E ++K + + D ++N++V L
Sbjct: 139 FLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLS 198
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
G + EA V + M KG++P+V+ YN+LM+ C + + A+KL++ M GC+ +++
Sbjct: 199 KEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVR 258
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
+YNILI + G I+ A L M K + PD TY++L++G CQ+ Q A ++ +
Sbjct: 259 SYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEM 318
Query: 532 VNHDVMLARSILSTFMISLCRR 553
++ ++ S + LC++
Sbjct: 319 RSYGLLPDLMTYSIVLDGLCKQ 340
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 167/373 (44%), Gaps = 17/373 (4%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y +I+ SL + I L ++ I+ + Y I+ + +A S+F ++
Sbjct: 120 YSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMV 179
Query: 147 FNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ P+ N L+ L+ +G I A +F+ M +GVE + + + +C
Sbjct: 180 E--RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQ-- 235
Query: 205 LGQVLSMLDEVRKRENSMI-NGSVIAV----LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
S +DE +K N M+ G +V ++I G CK R++EA +L E+ + P
Sbjct: 236 -----SQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTP 290
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D + Y + + F G + + +L++ R G+ P Y + GL + + EA EL
Sbjct: 291 DTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELL 350
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ + K + + LI + + +A F+ + KG P + T + + L K
Sbjct: 351 KAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKG 410
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
S+E E+++ ++ + + +YNV++ +G A +I+EM +G D S +
Sbjct: 411 GLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTF 470
Query: 439 NSLMEACCREDLL 451
L + R++++
Sbjct: 471 QMLSDLESRDEII 483
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/504 (23%), Positives = 234/504 (46%), Gaps = 32/504 (6%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINA 102
R+ L+ +LV V++ L+ + L + FF WA +Q + H+ YH++L+ L
Sbjct: 123 FREKLNETLVVDVLS--LVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRV 180
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE----ICN 158
+ L++++ D + ++ LI+ ++V E +D+G + N
Sbjct: 181 PEQFLREIRDE----DKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYN 236
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L+ V +D A + EMS G G F+ C+ + + L++++ K
Sbjct: 237 ALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIE---KE 293
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
E + +VI +I G C+ EEA L +R C P+ + YRI+ L G +
Sbjct: 294 EFKL--DTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRIL-----LCGCLR 346
Query: 279 EREV-----VLKKKRKLGVAPRTNDYREFILGLIVERRICEA----KELGEVIVSGKFTI 329
+R++ +L G P + I A K++G+ + +
Sbjct: 347 KRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVV 406
Query: 330 DDDVLNALIGS--VSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
+ ++ + G+ + S+D A + M++ V +SNL++ LC K ++
Sbjct: 407 YNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYS 466
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
+ + + + + D +Y+ ++ LC + ++ A+ + +EMK + PDV Y L+++ C
Sbjct: 467 IIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC 526
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ LL+ A+K +D+M GC+ N+ TY LI + + ++ A LF ML +G P+
Sbjct: 527 KVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVV 586
Query: 507 TYTSLLEGLCQETNLQAAFEVFNK 530
TYT+L++G C+ ++ A +++ +
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYAR 610
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 173/432 (40%), Gaps = 58/432 (13%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
I NSL+ G A K+ +M G + + + + I C N KL L +L+
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPS-LDVLELA 429
Query: 216 RKRENSMING--------------------------SVIAVLIIHGF------------- 236
K M++ S+I ++ GF
Sbjct: 430 EKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489
Query: 237 -CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
C +V+ AF + +E++ PD Y I+ + F +G + + + + G AP
Sbjct: 490 LCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPN 549
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFN 354
Y I + R++ A EL E+++S + ALI G S A +
Sbjct: 550 VVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYA 609
Query: 355 --------------FMIEKG--RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
F I+ G R P + T L LCK +K E ++ V+S
Sbjct: 610 RMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEP 669
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+ Y+ ++ C G+L EA V +M +G P+V Y+SL++ ++ L A K+
Sbjct: 670 NHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVL 729
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M + C+ N+ Y +I +VG+ + A RL M EKG P+ TYT++++G +
Sbjct: 730 SRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKA 789
Query: 519 TNLQAAFEVFNK 530
+ E+ +
Sbjct: 790 GKVDKCLELMRQ 801
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 177/417 (42%), Gaps = 26/417 (6%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS--LLA 162
S+++++ D+S Y +I L AF +F E+K N + P++ L+
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN--HVVPDVFTYTILID 523
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
G + A K FDEM G + + + I + + K+ + L E+ E +
Sbjct: 524 SFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSA-NELFEMMLSEGCI 582
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
N V +I G CK ++E+A ++ +R PD Y + + G++ +
Sbjct: 583 PN-VVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDD-----GNIRD--- 633
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
P Y + GL ++ EA++L +V+ + V +ALI
Sbjct: 634 -----------PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFC 682
Query: 343 SIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ A + F M E+G P + T S+L L K + D ++V + N ++
Sbjct: 683 KVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVI 742
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
Y M+ LC G+ EAY ++ M+ KG P+V Y ++++ + + +L QM
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
A GC+ N TY +LI+ G ++ A +L M + Y ++EG +E
Sbjct: 803 GAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNRE 859
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/472 (21%), Positives = 206/472 (43%), Gaps = 29/472 (6%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F +Y ++ L + +++ + +++K N + D Y +I S + Q+A
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQA 534
Query: 139 FSVFNE-VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
F+E V+ C P + +L+ + +A ++F+ M G + + +
Sbjct: 535 RKWFDEMVRDGC---APNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTAL 591
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMI----------NGSV------IAVLIIHGFCKG 239
I C++ ++ + + R R N+ I +G++ ++ G CK
Sbjct: 592 IDGHCKSGQIEKACQIY--ARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKA 649
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+V+EA +LD + + C+P+ I Y + + F +G + E ++V K + G P Y
Sbjct: 650 HKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTY 709
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIE 358
I L ++R+ A ++ ++ + + +I + + A + M E
Sbjct: 710 SSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE 769
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
KG P + T + + K K D+ +E+ + + A + +Y V+++ C +G L +
Sbjct: 770 KGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDD 829
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A+ ++ EMK+ ++ Y ++E RE ++ + L D++ + + Y ILI
Sbjct: 830 AHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILID 887
Query: 479 KFSEVGEIEGALRLFHNM--LEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
F + G +E AL L M A D Y+SL+E L + + AFE++
Sbjct: 888 SFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELY 939
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 196/426 (46%), Gaps = 17/426 (3%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEI--CNSLLAVLASDGYIDNALKM 176
Y ++ L + KA+ VF E+ +D G P++ L+ G I+ ALK+
Sbjct: 228 TYNSVLKGLCRSGMWDKAWEVFKEM----DDFGVAPDVRSFTILIGGFCRVGEIEEALKI 283
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
+ EM HRG++ + F I F K+ ++ L E+R ++ VI ++I GF
Sbjct: 284 YKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRC--FGLVPDGVIYTMVIGGF 341
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
C+ + +A +V DE+ C PD + Y + + + E +L + R+ GV P
Sbjct: 342 CRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDL 401
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNF 355
+ I G +E ++ +A +L + +++ + D N LI G D A ++
Sbjct: 402 CTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDD 461
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M + P T S L + C++ + ++ + ++ +YN ++ C SG
Sbjct: 462 MHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGN 521
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ + +Q+M + PD+ YN+L+ +ED + A KL + M ++ TYN+
Sbjct: 522 VSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNM 581
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI+ FS G ++ A +F M KG+ PD TY S++ G N + AF++ HD
Sbjct: 582 LINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQL------HD 635
Query: 536 VMLARS 541
ML R
Sbjct: 636 EMLQRG 641
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 175/443 (39%), Gaps = 75/443 (16%)
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
H+ K+L + + +D+V+ +++ + D + ++ + + + + A ++ + +
Sbjct: 164 HNYCKAL----EFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVS 219
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
G NS+L L G D A ++F EM GV F
Sbjct: 220 KGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSF--------------- 264
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
++I GFC+ +EEA K+ E+R R KPD +++ +
Sbjct: 265 ----------------------TILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCL 302
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
F G + L++ R G+ P Y I G C A ++S
Sbjct: 303 IGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGF------CRAG-----LMSDAL 351
Query: 328 TIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
+ D+ M+ G +P + T + L LCK + + +
Sbjct: 352 RVRDE-----------------------MVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 388
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
+ D+ ++ ++ C G+L +A + M + L PD+ YN+L++ CR
Sbjct: 389 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 448
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+ L A LWD M + N TY+ILI E G++E A M+ KG+ P+ T
Sbjct: 449 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 508
Query: 508 YTSLLEGLCQETNLQAAFEVFNK 530
Y S+++G C+ N+ + K
Sbjct: 509 YNSIIKGYCRSGNVSKGQKFLQK 531
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 148/335 (44%), Gaps = 2/335 (0%)
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
NS +N + +++ H +CK ++ V+ E+ R PD + + ++ + G
Sbjct: 151 NSEVNTYTLNIMV-HNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEA 209
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
++ G+ P Y + GL +A E+ + + D LIG
Sbjct: 210 AMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIG 269
Query: 340 SVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
+ + A+ + M +G P L + S L +R K D + + +
Sbjct: 270 GFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 329
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D Y +++ C +G + +A V EM G PDV YN+L+ C+E L A+ L
Sbjct: 330 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 389
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
++M G +L T+ LI + G+++ AL+LF ML + + PD TY +L++G+C++
Sbjct: 390 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 449
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+L A ++++ + ++ S + S C +
Sbjct: 450 GDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 484
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 189/436 (43%), Gaps = 7/436 (1%)
Query: 116 TLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALK 175
T V+ +I + Q + ++AF F + + I N+LLA L+ G+ A
Sbjct: 83 TPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAAD 142
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ + E +T + + +C+ + +V +++ E+ KR + V +++
Sbjct: 143 AYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKR--CVFPDVVTHNVMVDA 200
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
+ E A ++D + + KP + Y V + G + V K+ GVAP
Sbjct: 201 RFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPD 260
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFN 354
+ I G I EA ++ + + D + LIG + A+ +
Sbjct: 261 VRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLR 320
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M G VP + + C+ + + V + D+ +YN +++ LC
Sbjct: 321 EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 380
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
RL +A G++ EM+ +G+ PD+ + +L+ C E L A +L+D M ++ TYN
Sbjct: 381 RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 440
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF----EVFNK 530
LI G+++ A L+ +M + + P+ TY+ L++ C++ ++ AF E+ NK
Sbjct: 441 TLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 500
Query: 531 SVNHDVMLARSILSTF 546
+ ++M SI+ +
Sbjct: 501 GILPNIMTYNSIIKGY 516
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 140/337 (41%), Gaps = 9/337 (2%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLA 162
+ L++++ + D +Y +I + A V +E+ C + P++ N+LL
Sbjct: 317 AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM-VGCGCL-PDVVTYNTLLN 374
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
L + + +A + +EM RGV F I +C KL + L + D + N
Sbjct: 375 GLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML---NQR 431
Query: 223 INGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
+ ++ +I G C+ +++A + D++ RE P+ + Y I+ + G V +
Sbjct: 432 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF 491
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GS 340
L + G+ P Y I G + + ++ + ++ K + D N LI G
Sbjct: 492 GFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 551
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ A N M ++ P + T + L E +++ + A D
Sbjct: 552 IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 611
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+Y M++ T+G +EA+ + EM ++G PD F
Sbjct: 612 YTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDDKF 648
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 124/283 (43%), Gaps = 39/283 (13%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSL-IQGKNTQKAFSVFN 143
++Y+++L L R++ + +L +++ + D + +I I+GK KA +F+
Sbjct: 367 VTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGK-LDKALQLFD 425
Query: 144 EVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ N + + P+I N+L+ + G +D A ++D+M R + + + + + I CE
Sbjct: 426 TM-LN-QRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCE 483
Query: 202 NAKLGQVLSMLDEVRKRE--------NSMINGS-------------------------VI 228
++ LDE+ + NS+I G +
Sbjct: 484 KGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLIT 543
Query: 229 AVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+IHG+ K ++ +AFK+L+ + + +PD + Y ++ F + G+V E + +K
Sbjct: 544 YNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMC 603
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
G+ P Y I G + EA +L + ++ F DD
Sbjct: 604 AKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 646
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/504 (23%), Positives = 234/504 (46%), Gaps = 32/504 (6%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINA 102
R+ L+ +LV V++ L+ + L + FF WA +Q + H+ YH++L+ L
Sbjct: 123 FREKLNETLVVDVLS--LVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRV 180
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE----ICN 158
+ L++++ D + ++ LI+ ++V E +D+G + N
Sbjct: 181 PEQFLREIRDE----DKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYN 236
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L+ V +D A + EMS G G F+ C+ + + L++++ K
Sbjct: 237 ALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIE---KE 293
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
E + +VI +I G C+ EEA L +R C P+ + YRI+ L G +
Sbjct: 294 EFKL--DTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRIL-----LCGCLR 346
Query: 279 EREV-----VLKKKRKLGVAPRTNDYREFILGLIVERRICEA----KELGEVIVSGKFTI 329
+R++ +L G P + I A K++G+ + +
Sbjct: 347 KRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVV 406
Query: 330 DDDVLNALIGS--VSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
+ ++ + G+ + S+D A + M++ V +SNL++ LC K ++
Sbjct: 407 YNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYS 466
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
+ + + + + D +Y+ ++ LC + ++ A+ + +EMK + PDV Y L+++ C
Sbjct: 467 IIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC 526
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ LL+ A+K +D+M GC+ N+ TY LI + + ++ A LF ML +G P+
Sbjct: 527 KVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVV 586
Query: 507 TYTSLLEGLCQETNLQAAFEVFNK 530
TYT+L++G C+ ++ A +++ +
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYAR 610
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 173/432 (40%), Gaps = 58/432 (13%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
I NSL+ G A K+ +M G + + + + I C N KL L +L+
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPS-LDVLELA 429
Query: 216 RKRENSMING--------------------------SVIAVLIIHGF------------- 236
K M++ S+I ++ GF
Sbjct: 430 EKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489
Query: 237 -CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
C +V+ AF + +E++ PD Y I+ + F +G + + + + G AP
Sbjct: 490 LCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPN 549
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFN 354
Y I + R++ A EL E+++S + ALI G S A +
Sbjct: 550 VVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYA 609
Query: 355 --------------FMIEKG--RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
F I+ G R P + T L LCK +K E ++ V+S
Sbjct: 610 RMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEP 669
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+ Y+ ++ C G+L EA V +M +G P+V Y+SL++ ++ L A K+
Sbjct: 670 NHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVL 729
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M + C+ N+ Y +I +VG+ + A RL M EKG P+ TYT++++G +
Sbjct: 730 SRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKA 789
Query: 519 TNLQAAFEVFNK 530
+ E+ +
Sbjct: 790 GKVDKCLELMRQ 801
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 177/417 (42%), Gaps = 26/417 (6%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS--LLA 162
S+++++ D+S Y +I L AF +F E+K N + P++ L+
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN--HVVPDVFTYTILID 523
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
G + A K FDEM G + + + I + + K+ + L E+ E +
Sbjct: 524 SFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSA-NELFEMMLSEGCI 582
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
N V +I G CK ++E+A ++ +R PD Y + + G++ +
Sbjct: 583 PN-VVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDD-----GNIRD--- 633
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
P Y + GL ++ EA++L +V+ + V +ALI
Sbjct: 634 -----------PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFC 682
Query: 343 SIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ A + F M E+G P + T S+L L K + D ++V + N ++
Sbjct: 683 KVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVI 742
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
Y M+ LC G+ EAY ++ M+ KG P+V Y ++++ + + +L QM
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
A GC+ N TY +LI+ G ++ A +L M + Y ++EG +E
Sbjct: 803 GAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNRE 859
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/472 (21%), Positives = 206/472 (43%), Gaps = 29/472 (6%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F +Y ++ L + +++ + +++K N + D Y +I S + Q+A
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQA 534
Query: 139 FSVFNE-VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
F+E V+ C P + +L+ + +A ++F+ M G + + +
Sbjct: 535 RKWFDEMVRDGC---APNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTAL 591
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMI----------NGSV------IAVLIIHGFCKG 239
I C++ ++ + + R R N+ I +G++ ++ G CK
Sbjct: 592 IDGHCKSGQIEKACQIY--ARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKA 649
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+V+EA +LD + + C+P+ I Y + + F +G + E ++V K + G P Y
Sbjct: 650 HKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTY 709
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIE 358
I L ++R+ A ++ ++ + + +I + + A + M E
Sbjct: 710 SSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE 769
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
KG P + T + + K K D+ +E+ + + A + +Y V+++ C +G L +
Sbjct: 770 KGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDD 829
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A+ ++ EMK+ ++ Y ++E RE ++ + L D++ + + Y ILI
Sbjct: 830 AHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILID 887
Query: 479 KFSEVGEIEGALRLFHNM--LEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
F + G +E AL L M A D Y+SL+E L + + AFE++
Sbjct: 888 SFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELY 939
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/504 (23%), Positives = 234/504 (46%), Gaps = 32/504 (6%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINA 102
R+ L+ +LV V++ L+ + L + FF WA +Q + H+ YH++L+ L
Sbjct: 123 FREKLNETLVVDVLS--LVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRV 180
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE----ICN 158
+ L++++ D + ++ LI+ ++V E +D+G + N
Sbjct: 181 PEQFLREIRDE----DKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYN 236
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L+ V +D A + EMS G G F+ C+ + + L++++ K
Sbjct: 237 ALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIE---KE 293
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
E + +VI +I G C+ EEA L +R C P+ + YRI+ L G +
Sbjct: 294 EFKL--DTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRIL-----LCGCLR 346
Query: 279 EREV-----VLKKKRKLGVAPRTNDYREFILGLIVERRICEA----KELGEVIVSGKFTI 329
+R++ +L G P + I A K++G+ + +
Sbjct: 347 KRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVV 406
Query: 330 DDDVLNALIGS--VSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
+ ++ + G+ + S+D A + M++ V +SNL++ LC K ++
Sbjct: 407 YNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYS 466
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
+ + + + + D +Y+ ++ LC + ++ A+ + +EMK + PDV Y L+++ C
Sbjct: 467 IIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC 526
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ LL+ A+K +D+M GC+ N+ TY LI + + ++ A LF ML +G P+
Sbjct: 527 KVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVV 586
Query: 507 TYTSLLEGLCQETNLQAAFEVFNK 530
TYT+L++G C+ ++ A +++ +
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYAR 610
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 173/432 (40%), Gaps = 58/432 (13%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
I NSL+ G A K+ +M G + + + + I C N KL L +L+
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPS-LDVLELA 429
Query: 216 RKRENSMING--------------------------SVIAVLIIHGF------------- 236
K M++ S+I ++ GF
Sbjct: 430 EKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489
Query: 237 -CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
C +V+ AF + +E++ PD Y I+ + F +G + + + + G AP
Sbjct: 490 LCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPN 549
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFN 354
Y I + R++ A EL E+++S + ALI G S A +
Sbjct: 550 VVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYA 609
Query: 355 --------------FMIEKG--RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
F I+ G R P + T L LCK +K E ++ V+S
Sbjct: 610 RMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEP 669
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+ Y+ ++ C G+L EA V +M +G P+V Y+SL++ ++ L A K+
Sbjct: 670 NHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVL 729
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M + C+ N+ Y +I +VG+ + A RL M EKG P+ TYT++++G +
Sbjct: 730 SRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKA 789
Query: 519 TNLQAAFEVFNK 530
+ E+ +
Sbjct: 790 GKVDKCLELMRQ 801
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 177/417 (42%), Gaps = 26/417 (6%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS--LLA 162
S+++++ D+S Y +I L AF +F E+K N + P++ L+
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN--HVVPDVFTYTILID 523
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
G + A K FDEM G + + + I + + K+ + L E+ E +
Sbjct: 524 SFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSA-NELFEMMLSEGCI 582
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
N V +I G CK ++E+A ++ +R PD Y + + G++ +
Sbjct: 583 PN-VVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDD-----GNIRD--- 633
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
P Y + GL ++ EA++L +V+ + V +ALI
Sbjct: 634 -----------PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFC 682
Query: 343 SIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ A + F M E+G P + T S+L L K + D ++V + N ++
Sbjct: 683 KVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVI 742
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
Y M+ LC G+ EAY ++ M+ KG P+V Y ++++ + + +L QM
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
A GC+ N TY +LI+ G ++ A +L M + Y ++EG +E
Sbjct: 803 GAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNRE 859
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/472 (21%), Positives = 206/472 (43%), Gaps = 29/472 (6%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F +Y ++ L + +++ + +++K N + D Y +I S + Q+A
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQA 534
Query: 139 FSVFNE-VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
F+E V+ C P + +L+ + +A ++F+ M G + + +
Sbjct: 535 RKWFDEMVRDGC---APNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTAL 591
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMI----------NGSV------IAVLIIHGFCKG 239
I C++ ++ + + R R N+ I +G++ ++ G CK
Sbjct: 592 IDGHCKSGQIEKACQIY--ARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKA 649
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+V+EA +LD + + C+P+ I Y + + F +G + E ++V K + G P Y
Sbjct: 650 HKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTY 709
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIE 358
I L ++R+ A ++ ++ + + +I + + A + M E
Sbjct: 710 SSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEE 769
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
KG P + T + + K K D+ +E+ + + A + +Y V+++ C +G L +
Sbjct: 770 KGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDD 829
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A+ ++ EMK+ ++ Y ++E RE ++ + L D++ + + Y ILI
Sbjct: 830 AHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILID 887
Query: 479 KFSEVGEIEGALRLFHNM--LEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
F + G +E AL L M A D Y+SL+E L + + AFE++
Sbjct: 888 SFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELY 939
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 207/477 (43%), Gaps = 10/477 (2%)
Query: 57 NPYLLTHHSLA--------LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLK 108
+P+L+ S A LG +W Y+ +L L + ++
Sbjct: 119 SPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHA 178
Query: 109 QVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDG 168
++ V I D S + +I +L + + A + ++ + +++ +G
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEG 238
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVI 228
+D AL++ ++M G +S + V + FC+ ++ L+ + E+ ++ +
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 229 AVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
L+ +G CK V+ A +++D + PD Y V +G V E L +
Sbjct: 299 NTLV-NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMI 357
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPR 347
+P T Y I L E ++ EA EL V+ S D N+LI G + + R
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A+ F M KG P T + L +LC + K DE + + K + + + +YN ++
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
C + ++REA + EM+ G+ + YN+L++ C+ + A +L DQM G
Sbjct: 478 DGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQK 537
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
+ TYN L++ F G+I+ A + M G PD TY +L+ GLC+ ++ A
Sbjct: 538 PDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 121/498 (24%), Positives = 234/498 (46%), Gaps = 19/498 (3%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
S AL FN AS++PNF+ P Y IL L S + + +L+ +K + + +S +
Sbjct: 64 SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLI 123
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PE--ICNSLLAVLASDGYIDNALKMFD-- 178
+I S Q + + V V + +D G P+ N +L +L DG N LK+ +
Sbjct: 124 LIESYAQFELQDEILGV---VHWMIDDFGLKPDTHFYNRMLNLLV-DG---NNLKLVEIA 176
Query: 179 --EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
+MS G++ F V I C +L + ML+++ ++ I+ G+
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSY--GLVPDEKTFTTIMQGY 234
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER-EVVLKKKRKLGVAPR 295
+ ++ A ++ +++ C ++ ++ F G V + + + + G P
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFN 354
+ + GL + A E+ +V++ + D N++I + + + + A+ F +
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLD 354
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
MI + P T + L LCK N+ +E E+ +VL++ D+ ++N ++ LC +
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
R A + +EM+ KG +PD YN L+++ C + L A + QM SGC+ ++ TYN
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
LI F + +I A +F M GV+ ++ TY +L++GLC+ ++ A ++ ++ +
Sbjct: 475 TLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIME 534
Query: 535 DVMLARSILSTFMISLCR 552
+ ++ + CR
Sbjct: 535 GQKPDKFTYNSLLTHFCR 552
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 171/402 (42%), Gaps = 7/402 (1%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMF 177
D + ++ L + + + A + + + D NS+++ L G + A++
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFL 353
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGF 236
D+M R +T+ + I C K QV + R + I V +I G
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLC---KENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
C + A ++ +E+R + C+PD Y ++ + G + E +LK+ G A
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNF 355
Y I G +I EA+E+ + + + + N LI G S A +
Sbjct: 471 ITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQ 530
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
MI +G+ P T ++L + C+ + ++ + +++N D+ +Y ++S LC +GR
Sbjct: 531 MIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG-CSGNLKTYN 474
+ A +++ ++ KG+ YN +++ R+ A L+ +M + + +Y
Sbjct: 591 VEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYR 650
Query: 475 ILISKFSEVG-EIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
I+ G I A+ +LEKG P+ ++ L EGL
Sbjct: 651 IVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 218/493 (44%), Gaps = 43/493 (8%)
Query: 75 SQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN 134
S QP+ ++ +L+ L S Q+ +L ++K D ++Y +I + K+
Sbjct: 5 SCQPD----AFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 135 TQKAFSVFNE-VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+AF E VK +C P + +++ L G +A+K+ DEM +G +
Sbjct: 61 FGQAFKFLAEMVKNHCL---PTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYT 117
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRE--------NSMING------------------ 225
+ V + CE KL + ML+E+ R NS I G
Sbjct: 118 YNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP 177
Query: 226 ----SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
V +I+G CK ++ A ++LD++ R C PD + Y + + F G V
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
+L KLG P Y + L I +A+++ + FT D NA I +
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297
Query: 342 SSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ + A F+ M+E+G P S+ S L + LCK+ + D+ + + + D+
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDI 357
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQE-MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
Y V++ LC GR EA + + + K +PDV FYN ++++ C+ + A ++
Sbjct: 358 LLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHK 417
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
QM C N+ T+NIL+ + A + M+++G PD TY +L++ +C+
Sbjct: 418 QMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCG 476
Query: 520 NLQAAFEVFNKSV 532
AA E+F ++V
Sbjct: 477 KSAAALELFEEAV 489
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 180/396 (45%), Gaps = 7/396 (1%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL L ++ A ++ M G + I + + GQ L E+ K
Sbjct: 16 LLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVK-- 73
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
N + V I+ G CK R ++A K+LDE+R + C P+ Y ++ E + E
Sbjct: 74 NHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDE 133
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE-LGEVIVSGKFTIDDDVLNALI 338
+ +L++ G P Y FI GL R+ EA++ L + V+ V+N L
Sbjct: 134 AKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGL- 192
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
S D SA + M +G P + T S+L CK + + + + +
Sbjct: 193 --CKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRP 250
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+M +YN ++ L G + +A ++ EM+R+G PDV YN+ ++ C+ + ++ AK ++
Sbjct: 251 NMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVF 310
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
D+M GC+ N +Y++L+ + + E++ A+ L EK D YT LL+GLC+
Sbjct: 311 DRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKG 370
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMI-SLCRR 553
A +F+K ++ + M+ S C+R
Sbjct: 371 GRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKR 406
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 156/374 (41%), Gaps = 39/374 (10%)
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M + + F + + C + +L + +L R +E + I +I G+ K
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLG--RMKEMGCVPDDAIYNALISGYSKA 58
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
K +AFK L E+ C P + Y + + G + +L + R G +P Y
Sbjct: 59 KDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTY 118
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
+ GL ER++ EAK++ E M +
Sbjct: 119 NVIVEGLCEERKLDEAKKMLEE----------------------------------MAVR 144
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P + T ++ K LCK ++ DE K L+ D+ SY +++ LC SG L A
Sbjct: 145 GYFPDVVTYNSFIKGLCKCDRVDE---ARKFLARMPVTPDVVSYTTVINGLCKSGDLDSA 201
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
++ +M +G PDV Y+SL++ C+ + A L D M GC N+ YN L+
Sbjct: 202 SRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGA 261
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+G I A + M +G PD +Y + ++GLC+ ++ A VF++ V
Sbjct: 262 LHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPN 321
Query: 540 RSILSTFMISLCRR 553
S S + LC++
Sbjct: 322 ASSYSMLVEELCKK 335
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 119/562 (21%), Positives = 228/562 (40%), Gaps = 105/562 (18%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y++++ S ++ L ++ N Y I+ L + T+ A + +E++
Sbjct: 48 YNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMR 107
Query: 147 FNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ P I N ++ L + +D A KM +EM+ RG + + FI C+ +
Sbjct: 108 D--KGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDR 165
Query: 205 LGQVLSML-------------------------DEVRKRENSMIN-GSVIAVL----IIH 234
+ + L D + + M N G V+ +I
Sbjct: 166 VDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLID 225
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
GFCKG VE A +LD + C+P+ +AY + +G + + E +L + + G P
Sbjct: 226 GFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTP 285
Query: 295 RTNDYREFILGL---------------IVER--------------RICEAKELGEVIV-- 323
Y I GL +VER +C+ KEL + I
Sbjct: 286 DVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLV 345
Query: 324 ---SGKFTIDDDVLNALIGSVSSIDPR---SAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
K+ I D +L ++ R + +F + EK P + + + + CK
Sbjct: 346 EQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCK 405
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
R + D+ ++++K + + ++ ++N++V LC RL +A ++ M +G PD
Sbjct: 406 RRQIDKALQIHKQMLERN-CCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVT 464
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK------------------ 479
Y +L++A C+ A +L+++ GC ++ TY+ LI+
Sbjct: 465 YGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLD 524
Query: 480 ----------FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG-LCQETNLQAAFEVF 528
++E G + L+LF ++E V P+A T+ + G L + +L A +F
Sbjct: 525 VALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLF 584
Query: 529 NKSVNH----DVMLARSILSTF 546
+++V D+ +A +++ F
Sbjct: 585 DRAVKGGFFPDLFVANTLIDVF 606
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/458 (20%), Positives = 185/458 (40%), Gaps = 56/458 (12%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
T +SY +++ L S +++ +L Q+ T D Y +I +G ++A
Sbjct: 179 TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMG 238
Query: 141 VFNE-VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
+ + +K C P + NSLL L G+I A M EM RG + + I
Sbjct: 239 LLDSMLKLGCR---PNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACID 295
Query: 198 KFCENAKLGQVLSMLDEV---------------------------------RKRENSMIN 224
C+ ++ + ++ D + + RE I
Sbjct: 296 GLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIV 355
Query: 225 GSVIAVLIIHGFCKGKRVEEAF----KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
++ +++ G CKG R +EA KVLDE + C+PD Y ++ + + ++
Sbjct: 356 DILLYTVLLDGLCKGGRFDEACALFSKVLDE---KICEPDVFFYNVMLDSHCKRRQI-DK 411
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+ + K+ + + GL V+ R+ +A+ + +V F D L+ +
Sbjct: 412 ALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDA 471
Query: 341 VSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ +A + F ++ G VP + T S L L N ++E ++ L D
Sbjct: 472 MCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL-------D 524
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV-SFYNSLMEACCREDLLRPAKKLW 458
+ +N M+ +G + E+ ++P+ +F + + + L A+ L+
Sbjct: 525 VALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLF 584
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
D+ G +L N LI F++ G++E A R+F++M
Sbjct: 585 DRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSM 622
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 84/403 (20%), Positives = 157/403 (38%), Gaps = 30/403 (7%)
Query: 41 LGLRDSL-----SPSLVARVINPYLLTHHSLALGFFNWAS------QQPNFTHSPLSYHS 89
+GL DS+ P++VA N L H L G A ++ FT +SY++
Sbjct: 237 MGLLDSMLKLGCRPNMVA--YNSLLGALHRL--GHIGKAEDMLVEMERRGFTPDVVSYNA 292
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
+ L + ++ +V ++ T ++S Y ++ L + K A ++ + +
Sbjct: 293 CIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKY 352
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDE-MSHRGVEFSTIGFGVFIWKFCENAKLGQV 208
+ + + LL L G D A +F + + + E + V + C+ ++ +
Sbjct: 353 QIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKA 412
Query: 209 LSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVA 268
L + ++ +R + V +++HG C R+ +A +L + PDF+ Y +
Sbjct: 413 LQIHKQMLERNCCNV---VTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLV 469
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFT 328
+ G + ++ K G P Y I GL+ E EA L FT
Sbjct: 470 DAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLL--------FT 521
Query: 329 -IDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN-LSKNLCKRNKSDELV 385
+D + NA+I G + + F +IE P T +S L K +
Sbjct: 522 KLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKAR 581
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
++ +F D+ N ++ G L EA + MK+
Sbjct: 582 GLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMKQ 624
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 125/565 (22%), Positives = 242/565 (42%), Gaps = 64/565 (11%)
Query: 45 DSLSPSLVARVINPYLLTHHSLALGF--FNWASQQPNFTHSPLSYHSILKSLSLSRQINA 102
+ L+P L + ++N + LGF F W +++ +F S ++++ ++ L+ +
Sbjct: 56 EKLAPFLSSEIVNDVMREQRRPELGFRFFIWTTRRRSF-RSWVTHNLVIDMLAKDDGFDT 114
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK-FNCEDIGPEI--CNS 159
+L+++K + I + + +I + + +KA F ++K F C+ P++ NS
Sbjct: 115 YWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCK---PDVFTYNS 171
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
+L V+ AL ++++M + F + + C+N K L M DE+ ++
Sbjct: 172 ILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQK- 230
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+ ++I +I+ G C+ KR ++ ++L+ +++ C PD I + + F +G + E
Sbjct: 231 -GIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDE 289
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
+L+ K G Y I GL +R E +E + D + LI
Sbjct: 290 AFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIR 349
Query: 339 --GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
V +D A+ N M ++G P + L K C D+ + +S ND
Sbjct: 350 GFCEVGMVD--YALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDC 407
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK- 455
F +Y +++ +C +G L EA + +M+ G P + +N+L++ C+ L A+
Sbjct: 408 FPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARH 467
Query: 456 -----------------------------------------------KLWDQMFASGCSG 468
KL Q+ SG
Sbjct: 468 LFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVP 527
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TYN+LI+ F + I GA +LF + KG +PD+ TY +L++G + + AF V
Sbjct: 528 DIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVL 587
Query: 529 NKSVNHDVMLARSILSTFMISLCRR 553
++ V + + ++ M CR+
Sbjct: 588 DQMVKNGCTPSSAVYKCLMTWSCRK 612
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 101/464 (21%), Positives = 185/464 (39%), Gaps = 59/464 (12%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL F+ +Q+ + + Y IL L +++ + + +L +KV+ DS ++
Sbjct: 220 ALKMFDEMTQK-GIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALL 278
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVE 186
+ +AF++ + +G + +SL+ L D + +M G+E
Sbjct: 279 DGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIE 338
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
+ + + I FCE + L+ML+++ +R + + +I GFC +++A
Sbjct: 339 PDVVLYTILIRGFCEVGMVDYALNMLNDMTQR--GLSPDTYCYNALIKGFCDVGLLDKAR 396
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
+ E+ +C P Y I+ G + E + + LG +P + I GL
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGL 456
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
C+A EL E + +F+ +E G+ P+L
Sbjct: 457 ------CKAGELEE---------------------------ARHLFYK--MEIGKNPSL- 480
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
++ D D S MV LC SG + +AY ++ ++
Sbjct: 481 --------------------FLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQL 520
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
G+ PD+ YN L+ C+ + A KL+ ++ G S + TY LI F V
Sbjct: 521 ADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDRE 580
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
E A R+ M++ G P + Y L+ C++ L AF ++ K
Sbjct: 581 EDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLK 624
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 148/343 (43%), Gaps = 35/343 (10%)
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
E K N I +VLI + K E+A + +++ CKPD Y +
Sbjct: 120 EELKNSNIQIPPPTFSVLIA-AYAKSGMAEKAVESFGKMKDFGCKPDVFTYN------SI 172
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
+ + ++EV F+L L V ++ + L F I +
Sbjct: 173 LHVMVQKEV-------------------FLLALAVYNQMLK---LNYNPNRATFVI---L 207
Query: 334 LNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
LN L + + D A+ F+ M +KG P + + LC+ ++D++ + +
Sbjct: 208 LNGLCKNGKTDD---ALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKV 264
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ D + N ++ C G++ EA+ ++Q +++G + Y+SL++ R
Sbjct: 265 SGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDE 324
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
++ +MF +G ++ Y ILI F EVG ++ AL + ++M ++G++PD Y +L++
Sbjct: 325 VQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIK 384
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
G C L A + + +D + + +CR L+
Sbjct: 385 GFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLL 427
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 85/454 (18%), Positives = 153/454 (33%), Gaps = 122/454 (26%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G +D AL M ++M+ RG+ T + I FC+ L + S+ E+ K N S
Sbjct: 355 GMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISK--NDCFPTSC 412
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG------------ 275
++I G C+ ++EA ++ +++ C P + + + + G
Sbjct: 413 TYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM 472
Query: 276 ------SVF------------------------EREVVLKKKRKL------GVAPRTNDY 299
S+F E ++LK + L GV P Y
Sbjct: 473 EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTY 532
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIE 358
I G + I A +L + + D LI +D A + M++
Sbjct: 533 NVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVK 592
Query: 359 KGRVPTLSTLSNLSKNLCKRNK------------------SDELVEVYK----------- 389
G P+ + L C++ K DE +++ +
Sbjct: 593 NGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKA 652
Query: 390 ---VLSANDYFTDME--SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+L N + E Y + + LC + R EA + +K
Sbjct: 653 VRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKE---------------- 696
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C+ D+ P+ C +LI+ + G +E A+ +F LEKG
Sbjct: 697 -CQMDVNPPS-----------CV-------MLINGLCKDGNLEMAVDIFLYTLEKGFMLM 737
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNK--SVNHDV 536
LL L + ++ A ++ N+ S +D+
Sbjct: 738 PRICNQLLRSLILQDKMKHALDLLNRMNSAGYDL 771
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 118/492 (23%), Positives = 220/492 (44%), Gaps = 41/492 (8%)
Query: 70 FFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSL 129
FF WA +P F H+ + +S+L+ V K V D Y +I
Sbjct: 3 FFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGF 62
Query: 130 IQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
+ + +A ++ E+K I P I SL+ L + D AL++F +M V+
Sbjct: 63 CKAEQIPQAVNLLGEMK--AAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKP 120
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
+ V I C+ KL S + R ++ + V +++H K + E+ +
Sbjct: 121 DAFLYTVVIGHLCKINKLDLAASYFE--RMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQ 178
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
+ +E+ + P+ + Y V + G + + ++++ + G +P + Y I GL
Sbjct: 179 IFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLC 238
Query: 308 VERRICEAKELGE--------VIV----------SGKFTIDDDVLNALIGSVSSIDPRSA 349
R EA+EL E VIV +GK V +I + + DP S
Sbjct: 239 KHDRHDEARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSY 298
Query: 350 IVFFNFMIEKGRV----------------PTLSTLSNLSKNLCKRNKSDE-LVEVYKVLS 392
V + + RV P + + L LCK + +E V + ++L
Sbjct: 299 NVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLE 358
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D + +Y+ ++ LC + RL +AY V+Q+M+R G PDV Y ++++A C+ L
Sbjct: 359 TGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLD 418
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A++L+ +M GC+ ++ YNILI + +++ A+ + M +G+ P+ + ++++
Sbjct: 419 EARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIV 478
Query: 513 EGLCQETNLQAA 524
+GLC+E+ ++ A
Sbjct: 479 DGLCKESRVEEA 490
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 15/233 (6%)
Query: 327 FTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
F DD LI G + A+ M G PT+ T +L + LC+ N +D+ +
Sbjct: 48 FRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKAL 107
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY----NSL 441
+++ + D Y V++ LC +L A + M + G PD Y +SL
Sbjct: 108 QIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSL 167
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+AC E +++++M + G S L TY +++ + + G I+ AL L + G
Sbjct: 168 FKACKWEQ----GHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGR 223
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVN--HDVMLARSILSTFMISLCR 552
+P + Y++L++GLC+ A E+F + DV+ + ++F+ LC+
Sbjct: 224 SPSGSLYSTLIDGLCKHDRHDEARELFEMAAGDVQDVI----VYTSFISGLCK 272
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%)
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N ++ G REAY V ++ PD Y +L+ C+ + + A L +M A
Sbjct: 21 NSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKA 80
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
+G + + T+ LI K E+ + AL++FH M++ V PDA YT ++ LC+ L
Sbjct: 81 AGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDL 140
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISL 550
A F + V + + + + SL
Sbjct: 141 AASYFERMVQSGCLPDKVTYTVLVHSL 167
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 130/564 (23%), Positives = 241/564 (42%), Gaps = 68/564 (12%)
Query: 47 LSPSLVARVI-NPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAID- 104
LSP +V +I NP + L FF WAS F ++ S L N ++
Sbjct: 57 LSPKIVTSIIQNP---PNPQLGFRFFIWASNFKRFR----AWESCDLITDLLINQNGLEL 109
Query: 105 --SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK-FNCEDIGPEIC--NS 159
L+ +K I + + + +I ++ T KA F ++ F+C P++ N
Sbjct: 110 YCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCT---PDVYTYNM 166
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
+L VL ++ AL ++ M + F + I C++ + L + DE+ +R
Sbjct: 167 ILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQR- 225
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
++ + ++I G C+ KRV++A+++ D+++ PDF+ + F ++ V E
Sbjct: 226 -GILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDE 284
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
+L+ K G Y I GL +R + + L ++ D + ++
Sbjct: 285 AFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMK 344
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G + R A+ N M E G VP + L K C E + +S +D F
Sbjct: 345 GLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFP 404
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR----------- 447
++++Y++++S +C +G R+A + EM++ G P +NSL++ C+
Sbjct: 405 NVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLF 464
Query: 448 -------------------------------------EDLLRPAKKLWDQMFASGCSGNL 470
L+ A ++ Q+ SG + +
Sbjct: 465 YKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGI 524
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TYNIL++ F ++G GA +LF M KG++PD TY +L+ GL + + A++VF++
Sbjct: 525 YTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQ 584
Query: 531 SVNHDVMLARSILSTFMISLCRRV 554
+ ++ T M +CRR+
Sbjct: 585 MEKNGCTPDAAVYRTMMTWMCRRM 608
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 190/467 (40%), Gaps = 57/467 (12%)
Query: 116 TLDSSVYRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEIC--NSLLAVLASDGYIDN 172
T D Y I+ LIQ A +V+ + K NC P + + L+ L G + +
Sbjct: 158 TPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCL---PNVATFSILIDGLCKSGNVKD 214
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
AL +FDEM+ RG+ + V I C + ++ + D+++ ++ + V +
Sbjct: 215 ALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMK--DSGVGPDFVTCNAL 272
Query: 233 IHGFCKGKRVEEAFKVLD---------ELRIREC-------------------------- 257
++GFC RV+EAF +L ++R C
Sbjct: 273 LNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNV 332
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
KPD Y I+ + G V + +L + + GV P T Y I G + EA+
Sbjct: 333 KPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARS 392
Query: 318 LGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
L I + + LI G + R A FN M + G P+ T ++L LC
Sbjct: 393 LQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLC 452
Query: 377 KRNKSDELVEVY-------------KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
K + ++ ++ ++ + D S MV LC SG + +AY ++
Sbjct: 453 KTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRIL 512
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
++ G P + YN L+ C+ A KL+ +M G S + TY LI+
Sbjct: 513 MQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRF 572
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
E A ++F M + G PDA Y +++ +C+ L AF ++ K
Sbjct: 573 QREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLK 619
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 132/325 (40%), Gaps = 34/325 (10%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I + K ++A + +R +C PD Y ++ + VL +K L
Sbjct: 131 VLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILD-------------VLIQKNFL 177
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
+L L V R+ + L V F+I D G S + + A+
Sbjct: 178 ------------LLALTVYTRMMKLNCLPNV---ATFSILID------GLCKSGNVKDAL 216
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
F+ M ++G +P T + LC+ + D+ ++ + + D + N +++
Sbjct: 217 HLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGF 276
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C R+ EA+ +++ ++ G DV Y+ L+ R + L+ +M ++
Sbjct: 277 CMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDV 336
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
Y I++ +E G++ AL L + M E GV PD Y L++G C L A + +
Sbjct: 337 YLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLE 396
Query: 531 SVNHDVMLARSILSTFMISLCRRVL 555
HD S + +CR L
Sbjct: 397 ISRHDCFPNVKTYSILISGMCRNGL 421
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 223/487 (45%), Gaps = 14/487 (2%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVN-KITLDSSVYRFI 125
AL FN ++ F HS L+Y I++ L A+++VL + +++ +L VY
Sbjct: 23 ALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEGVYIGA 82
Query: 126 IPSLIQGKNTQKAFSVFNEVKF-NCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSH 182
+ S + Q+A VF + F NCE P + N+++ +L GY A K+F M +
Sbjct: 83 MKSYGRKGKVQEAVDVFERMDFYNCE---PSVLSYNAIMNILVESGYFKQAHKVFLRMKN 139
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRV 242
G+ F + I FC + L +L+ + + + +V ++ GF +
Sbjct: 140 VGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQL--NAVAYCTVVAGFYEENYR 197
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
EA+++ +++ PD + + G V E E +L K K G+ + F
Sbjct: 198 VEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIF 257
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGR 361
I GL + + A + + ++ T D N LI G + + A + + ++ G
Sbjct: 258 IQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGL 317
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P T + L CK ++ + + D +Y +++ LC + + A
Sbjct: 318 EPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALA 377
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+ KGL P V YN L++ C+E L+ A ++ ++M +GCS ++ TYN++I+
Sbjct: 378 LFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLC 437
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH----DVM 537
++G + A L ++ + KG PD T+ +L++G C++ ++ ++ NK +H DV+
Sbjct: 438 KMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVI 497
Query: 538 LARSILS 544
S+L+
Sbjct: 498 TYNSVLN 504
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 211/474 (44%), Gaps = 9/474 (1%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N S LSY++I+ L S V ++K I D + I S + K A
Sbjct: 106 NCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSA 165
Query: 139 FSVFNE-VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
+ N V C+ C +++A + Y A ++F++M G+ F +
Sbjct: 166 LRLLNNMVSQGCQLNAVAYC-TVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLH 224
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
C+ ++ + +L++V K+ M + + I G C+ + A +LD +
Sbjct: 225 TLCKKGEVQESERLLNKVLKK--GMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGL 282
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
PD + Y + +V E E L K G+ P Y I G + A++
Sbjct: 283 TPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEK 342
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+ + + F D+ +LI + D A+ FN + KG PT+ + L K LC
Sbjct: 343 ILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLC 402
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+ + +++ +S N +D+ +YN++++ LC G + +A ++ + KG PDV
Sbjct: 403 QEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVF 462
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
+N+L++ C++ + ++ ++M++ G + ++ TYN +++ S+ + E + F M
Sbjct: 463 TFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETM 522
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAF----EVFNKSVNHDVMLARSILSTF 546
+EKG P+ TY L E LC+ + A E+ NK + D + +I+S F
Sbjct: 523 VEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGF 576
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 175/387 (45%), Gaps = 5/387 (1%)
Query: 173 ALKMFDEMSHR-GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR-ENSMINGSVIAV 230
AL+MF+++ G + S + + I K + + ++L E R +NS++ G I
Sbjct: 23 ALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEGVYIGA 82
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+ +G KGK V+EA V + + C+P ++Y + G + V + + +
Sbjct: 83 MKSYGR-KGK-VQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNV 140
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR-SA 349
G+ P + I +R A L +VS ++ ++ + R A
Sbjct: 141 GIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEA 200
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
FN M+ G P +ST + L LCK+ + E + + +++ ++N+ +
Sbjct: 201 YELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQG 260
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC G L A ++ + R+GL PDV YN+L+ C+ + A+K ++ G +
Sbjct: 261 LCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPD 320
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
TYN LI + ++G ++ A ++ + KG PD TY SL+ GLCQ + A +FN
Sbjct: 321 GFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFN 380
Query: 530 KSVNHDVMLARSILSTFMISLCRRVLI 556
++ + + + + LC+ LI
Sbjct: 381 AALGKGLKPTVILYNMLIKGLCQEGLI 407
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 190/449 (42%), Gaps = 19/449 (4%)
Query: 91 LKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCE 150
+KS +++ ++ +L + L++ Y ++ + +A+ +FN++
Sbjct: 153 IKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDML---- 208
Query: 151 DIG--PEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
IG P++ N LL L G + + ++ +++ +G+ + F +FI C L
Sbjct: 209 RIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLS 268
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+SMLD V + + V +I G CK V EA K L +L +PD Y
Sbjct: 269 GAMSMLDSVIRE--GLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNT 326
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ + + MG + E +L+ G P Y I GL I A L +
Sbjct: 327 LIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKG 386
Query: 327 FTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
+ N LI G A+ N M E G + T + + LCK +
Sbjct: 387 LKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDAN 446
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM--- 442
+ A Y D+ ++N ++ C ++ ++ +M G+ PDV YNS++
Sbjct: 447 NLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGL 506
Query: 443 -EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+A EDL+ ++ M GC N TYNIL + G++ AL L +L KG+
Sbjct: 507 SKAVKNEDLMET----FETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGI 562
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNK 530
PD ++ +++ G +L+ A+++F +
Sbjct: 563 TPDTVSFATIISGFANNGDLKGAYQLFRR 591
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 197/447 (44%), Gaps = 14/447 (3%)
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
LS ++ +DSV+++ +T D Y +I L + N +A +++ +
Sbjct: 267 LSGAMSMLDSVIRE----GLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGF 322
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
N+L+ G + NA K+ +G + I C+N ++ + L++ +
Sbjct: 323 TYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAA 382
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ + ++ ++I G C+ + +A ++++E+ C D Y +V MG
Sbjct: 383 LGK--GLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMG 440
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID----D 331
V + ++ G P + I G + ++ ++ + S T D +
Sbjct: 441 CVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYN 500
Query: 332 DVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
VLN L +V + D F M+EKG VP T + L+++LCK K +E +++ +
Sbjct: 501 SVLNGLSKAVKNEDLMET---FETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEI 557
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM-KRKGLDPDVSFYNSLMEACCREDL 450
D S+ ++S +G L+ AY + + M ++ + + YN ++ A +
Sbjct: 558 LNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLD 617
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
L +KL+ +M A GC+ + TY ++I F G + + M+EKG P TT+
Sbjct: 618 LHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGR 677
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVM 537
++ LC + + A ++ + V++ ++
Sbjct: 678 VINCLCVQHRVHEAVDIIHFMVHNGIV 704
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/450 (20%), Positives = 194/450 (43%), Gaps = 18/450 (4%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+++ +L +L ++ + +L +V + + + I L + A S+ + V
Sbjct: 218 TFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSV 277
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
E + P++ N+L+ L + + A K ++ + G+E + I +C+
Sbjct: 278 IR--EGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCK-- 333
Query: 204 KLGQVLSMLDEVRK-RENSMINGSV----IAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
+ ML K + ++ G V +I+G C+ ++ A + + + K
Sbjct: 334 -----MGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLK 388
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
P I Y ++ + G + + ++ + + G + Y I GL + +A L
Sbjct: 389 PTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNL 448
Query: 319 GEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
++ + D N LI G + + I N M G P + T +++ L K
Sbjct: 449 MNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSK 508
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
K+++L+E ++ + + +YN++ LC +G++ EA ++ E+ KG+ PD
Sbjct: 509 AVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVS 568
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFAS-GCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
+ +++ L+ A +L+ +M S TYNI+I+ F+E ++ +LF M
Sbjct: 569 FATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEM 628
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
G APD TY +++G C N + ++
Sbjct: 629 GAGGCAPDTYTYRVMIDGFCITGNTDSGYK 658
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 133/528 (25%), Positives = 229/528 (43%), Gaps = 40/528 (7%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
S ++ F+W Q + HS Y ++ L + + ID +L Q+K I S++
Sbjct: 86 STSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFIS 145
Query: 125 IIPSLIQGKNTQKAFSVFNEVK--FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSH 182
I+ + + + E++ ++CE N +L +L S A +F +M
Sbjct: 146 IMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSY-NVVLEILVSGNCHKVAANVFYDMLS 204
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRV 242
R + + FGV + C ++ LS+L ++ K + + SVI +IH K RV
Sbjct: 205 RKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTK--HGCVPNSVIYQTLIHSLSKCNRV 262
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
EA ++L+E+ + C PD + V + E ++ + G P Y
Sbjct: 263 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYL 322
Query: 303 ILGLIVERRICEAKEL----------------GEVIVSGKFTIDDDVLNALI---GSVSS 343
+ GL R+ AK+L + G+ VL+ ++ G V
Sbjct: 323 MNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 382
Query: 344 IDPRSAIVFFNF--------------MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
+ +++++ + M KG P + + + L CK K DE +
Sbjct: 383 VCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLN 442
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+SA+ + +N ++S C R+ EA + +EM RKG PDV +NSL+ C D
Sbjct: 443 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 502
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
++ A L M + G N TYN LI+ F GEI+ A +L + M+ +G D TY
Sbjct: 503 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYN 562
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS-LCRRVLI 556
SL++GLC+ + A +F K + D ++ SI +I+ LCR ++
Sbjct: 563 SLIKGLCRAGEVDKARSLFEKML-RDGLVPSSISCNILINGLCRSGMV 609
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 115/520 (22%), Positives = 216/520 (41%), Gaps = 66/520 (12%)
Query: 63 HHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVY 122
H A F++ S++ + ++ ++K+L ++++ SVL+ + + +S +Y
Sbjct: 192 HKVAANVFYDMLSRK--IPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIY 249
Query: 123 RFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSH 182
+ +I SL + +A + E+ E N ++ L I+ A KM + M
Sbjct: 250 QTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI 309
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE----NSMINGSVI--------AV 230
RG I +G + C+ ++ + + K N++I+G V AV
Sbjct: 310 RGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAV 369
Query: 231 L------------------IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
L +I+G+ K V A +VL ++R + CKP+ +Y I+ + F
Sbjct: 370 LSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFC 429
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
+G + E +L + G+ P T + I E RI EA E+
Sbjct: 430 KLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI-------------- 475
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
F M KG P + T ++L LC+ ++ + + + +
Sbjct: 476 --------------------FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 515
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ + +YN +++ G ++EA ++ EM +G D YNSL++ CR +
Sbjct: 516 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVD 575
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A+ L+++M G + + NILI+ G +E A+ M+ +G PD T+ SL+
Sbjct: 576 KARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 635
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
GLC+ ++ +F K + +T M LC+
Sbjct: 636 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCK 675
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 85/197 (43%), Gaps = 2/197 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ G I A K+ +EM +G I + I C ++ + S+ +++ +
Sbjct: 527 NTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 586
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ ++ S+ ++I+G C+ VEEA + E+ +R PD + + + G +
Sbjct: 587 --DGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 644
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ + +K + G+ P T Y + L + +A L + + F +D + L
Sbjct: 645 EDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSIL 704
Query: 338 IGSVSSIDPRSAIVFFN 354
+ S+ + F+N
Sbjct: 705 LQSLVPQETLDRRTFYN 721
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 204/453 (45%), Gaps = 44/453 (9%)
Query: 83 SPLSYHSILKSLSLSRQI--NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
SP++Y+ I+ + S R + A D + K ++ + D Y ++ L + ++A
Sbjct: 79 SPVTYNVIIDA-SCKRGMLEEACDLIKKMIEDGHVP-DVVTYNTVMDGLCKSGRVEEALL 136
Query: 141 VFNEV-KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+FNE+ + C N+++ L ID A ++F EM R + + +G+ I
Sbjct: 137 LFNEMERLGCTP-NRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGL 195
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECK 258
+ KL + + R+ +S I S + ++IHG C ++EA ++ +R + C+
Sbjct: 196 AKAGKLNEAYKLF---RRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCR 252
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
P + I+ + G + E +LK+ G P Y I GL R+ +A+ L
Sbjct: 253 PSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 312
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
++D M+++ PT+ T + L LCK
Sbjct: 313 ----------LED------------------------MVKRQCKPTVVTQNTLIHGLCKA 338
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+ E EV + ++ D+ +YN +V C +G+ A ++ +M +GL P+V Y
Sbjct: 339 GRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTY 398
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
+L+ C+ + L A ++ QM +SGC+ NL TY LI F G+++G L+LF M+
Sbjct: 399 TALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVC 458
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
G++PD Y +L LC+ A E+ +
Sbjct: 459 AGISPDHVVYGTLAAELCKSGRSARALEILREG 491
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 193/417 (46%), Gaps = 3/417 (0%)
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNAL 174
++ DS Y +I L + A +F ++ + SL+ L D+A
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIH 234
++F +M+ RG S + + V I C+ L + ++ ++ E+ + V ++
Sbjct: 66 ELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMI--EDGHVPDVVTYNTVMD 123
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
G CK RVEEA + +E+ C P+ ++ + + + V + + P
Sbjct: 124 GLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPP 183
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFF 353
+ Y I GL ++ EA +L ++ T N +I G + A+ F
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF 243
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
M KG P+ T + L CKR K DE + K ++ + + D+ +Y+ ++S LC+
Sbjct: 244 KSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSI 303
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
R+ +A ++++M ++ P V N+L+ C+ ++ A+++ D M +SG S ++ TY
Sbjct: 304 ARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 363
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
N L+ G+ E A L +M+ +G+AP+ TYT+L+ GLC+ L A VF +
Sbjct: 364 NTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/485 (21%), Positives = 202/485 (41%), Gaps = 23/485 (4%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N + SY ++ L+ + ++N + +++ + +T + Y +I L + A
Sbjct: 5 NVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 64
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+F ++ P N ++ G ++ A + +M G + + +
Sbjct: 65 RELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124
Query: 199 FCENAKLGQVLSMLDEV--------RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD 250
C++ ++ + L + +E+ R+ N+ II G C+ ++++A +V
Sbjct: 125 LCKSGRVEEALLLFNEMERLGCTPNRRSHNT----------IILGLCQQSKIDQACQVFH 174
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
E+ R+ PD +Y I+ + G + E + ++ G+ P Y I G+ +
Sbjct: 175 EMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAY 234
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLST 367
+ EA EL + + S N LI + +D A M + G VP + T
Sbjct: 235 TLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMD--EAFRLLKRMTDDGHVPDVVT 292
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
S L LC + D+ + + + + + N ++ LC +GR++EA V+ M
Sbjct: 293 YSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMV 352
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
G PDV YN+L+ CR A++L M A G + N+ TY L+S + +
Sbjct: 353 SSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLP 412
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
A +F M G AP+ TYT+L+ G C + ++F + V + + T
Sbjct: 413 EACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLA 472
Query: 548 ISLCR 552
LC+
Sbjct: 473 AELCK 477
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 130/299 (43%), Gaps = 34/299 (11%)
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
R PD +Y I+ + G + + + +K GV P T Y I GL + +
Sbjct: 4 RNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDD 63
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
A+EL F M +G P+ T + +
Sbjct: 64 AREL----------------------------------FADMNRRGCPPSPVTYNVIIDA 89
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
CKR +E ++ K + + + D+ +YN ++ LC SGR+ EA + EM+R G P+
Sbjct: 90 SCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPN 149
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+N+++ C++ + A +++ +M A + +Y ILI ++ G++ A +LF
Sbjct: 150 RRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFR 209
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
ML+ G+ P A TY ++ G+C L A E+F + +R + + + C+R
Sbjct: 210 RMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKR 268
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 88/181 (48%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M E+ P + L L K K ++ ++++ L + +Y ++ LC +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+A + +M R+G P YN +++A C+ +L A L +M G ++ TYN
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
++ + G +E AL LF+ M G P+ ++ +++ GLCQ++ + A +VF++ D
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 536 V 536
+
Sbjct: 181 I 181
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 141/379 (37%), Gaps = 40/379 (10%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY ++ L+ + ++N + +++ + IT + Y +I + +A +F +
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ N L+ G +D A ++ M+ G + + I C A++
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 306
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+L+++ KR+ V +IHG CK R++EA +VLD + PD + Y
Sbjct: 307 DDARHLLEDMVKRQCKPT--VVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYN 364
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ G +L G+AP Y + GL R+ EA + + S
Sbjct: 365 TLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 424
Query: 326 KFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS--- 381
+ ALI G S+ + F M+ G P L+ LCK +S
Sbjct: 425 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA 484
Query: 382 -------------------------DELVEVYKVLSANDYFTDM---------ESYNVMV 407
D L++ K+ A + DM E +V
Sbjct: 485 LEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLV 544
Query: 408 SFLCTSGRLREAYGVIQEM 426
+ LC SG+ EA V++E+
Sbjct: 545 AGLCKSGQGGEARAVLEEI 563
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/219 (17%), Positives = 86/219 (39%), Gaps = 23/219 (10%)
Query: 51 LVARVINPYLLTHHSLALGFFNW---------------ASQQPNFTHSPLSYHSILKSLS 95
+V R P ++T ++L G + Q P+ ++Y++++
Sbjct: 316 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV----VTYNTLVHGHC 371
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
+ Q +L + + + Y ++ L + +A VF ++K + P
Sbjct: 372 RAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS--GCAPN 429
Query: 156 I--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
+ +L+ S G +D LK+F EM G+ + +G + C++ + + L +L
Sbjct: 430 LFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR 489
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
E R+ S G + + G ++E A + ++
Sbjct: 490 EGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDM 528
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 207/496 (41%), Gaps = 59/496 (11%)
Query: 51 LVARVINPYLLTHHSLALGFFN----------WASQQPNFTHSPLSYHSILKSLSLSRQI 100
+VA+ P ++ L GFFN + + +Y++++ + +I
Sbjct: 1 MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGKPDVFAYNAVISGFCKANRI 60
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV--KFNCEDIGPEICN 158
+ +VL ++K + D + +I + A VF E+ NC+ P +
Sbjct: 61 ESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCK---PTLIT 117
Query: 159 SLLAVLAS--DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
+ + A +G ID ALK+ DEM RG+E T + V
Sbjct: 118 YTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNV---------------------- 155
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
I G CK +V+ AF+ + L R CKPD I Y I+ G
Sbjct: 156 ---------------ITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGK 200
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
E E + + G P Y I L + +I E+ L +V+ T D +
Sbjct: 201 WDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDP 260
Query: 337 LIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
LI + +D AI F + MI G +P + + + LCK D VE++ L
Sbjct: 261 LIAAFCREGKLD--MAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDE 318
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
++ SYN M+S L +SG A G+I +M KG+DPDV YNSL+ CR+ ++
Sbjct: 319 VGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDE 378
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A L M + N+ +Y ++ + I+ A+ + M+E G P+ TTYT L+E
Sbjct: 379 AIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIE 438
Query: 514 GLCQETNLQAAFEVFN 529
G+ + A E+ N
Sbjct: 439 GIGFSGSRTQAMELAN 454
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 181/414 (43%), Gaps = 48/414 (11%)
Query: 150 EDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
+D P++ C L+ + ID A ++ + G + + I FC+ ++
Sbjct: 4 KDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIES 62
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RIRECKPDFIAYRI 266
++LD ++++ S V ++I FC +++ A KV +EL + CKP I Y I
Sbjct: 63 AKTVLDRMKRKGFS--PDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTI 120
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ E + L G + E +L + G+ P T Y GL E ++ A E
Sbjct: 121 LIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFE--------- 171
Query: 327 FTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
F + +G P + T + L + L + K DE +
Sbjct: 172 -------------------------FVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEK 206
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
+ + ++ +Y++++S LC G++ E+ +++ MK KGL PD Y+ L+ A C
Sbjct: 207 WMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFC 266
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
RE L A + D M G ++ YN +++ + G + A+ +F + E G P+ +
Sbjct: 267 REGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVS 326
Query: 507 TYTSLLEGLCQETNLQAAF----EVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+Y ++L L + A ++ +K ++ DV+ S++S LCR ++
Sbjct: 327 SYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLIS----CLCRDGMV 376
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 117/505 (23%), Positives = 220/505 (43%), Gaps = 77/505 (15%)
Query: 67 ALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
ALG + +Q N H P L+Y ++ LS +R++ VL+++ + D++
Sbjct: 24 ALGVY----RQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTV 79
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
++ SL G +D+A ++ +EM HRG
Sbjct: 80 VVQSLCLGDR-----------------------------------VDDARELVEEMLHRG 104
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL----IIHGFCKGK 240
+ + I + + C+ +L + +++++ + +R G V+ II GFC+ +
Sbjct: 105 MAANAITYSALVDGLCKCERLDEAVALVETMAER------GCAPTVVTYNSIITGFCRAR 158
Query: 241 RVEEAFKVLDELRIRECKPDFIAY----------RIVAEEFKLMGSVFEREVVLKKKRKL 290
RV+EA ++++ C PD I Y R V +L+G V R
Sbjct: 159 RVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRR---------- 208
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS-VSSIDPRSA 349
G P Y I GL R+ +A ++ E + I N+LIG + D A
Sbjct: 209 GFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAI---TYNSLIGGYCRAGDMDEA 265
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
I M++ P + T + L CK + D+ E+++ + AN D+ ++ +V
Sbjct: 266 IRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDG 325
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC GR+ +A +++E+ R+G P + YN +++ C+ + +R A++L + G N
Sbjct: 326 LCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPN 385
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNM-LEKGVAPDATT-YTSLLEGLCQETNLQAAFEV 527
TYNIL++ G + AL+ + E G P + Y +L+ LC++ A +
Sbjct: 386 TVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQF 445
Query: 528 FNKSVNHDVMLARSILSTFMISLCR 552
+ + + + A + +T + +LC+
Sbjct: 446 YEEMIQRGYVPAAATFATVVFALCK 470
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 163/396 (41%), Gaps = 19/396 (4%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGF---------FNWASQQPNFTHSP--LSYHSILKSL 94
+L ++ R P ++T++S+ GF + Q P ++Y +++
Sbjct: 130 ALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGF 189
Query: 95 SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGP 154
SR + +L +V T D Y +I L + + A +F E+ I
Sbjct: 190 CKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAI-- 247
Query: 155 EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
NSL+ G +D A+++ +M + + + FC+ +L + +
Sbjct: 248 -TYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQ 306
Query: 215 VRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+ N + V ++ G C R+E+A ++L+E+ R C P Y V + +
Sbjct: 307 MVA--NKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKA 364
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-KELGEVIVSGKFTIDDDV 333
V + E ++ R G P T Y + G R +A + L ++ G
Sbjct: 365 NQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVA 424
Query: 334 LNALIGSVSSIDPRS--AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
+ A+I D R+ A+ F+ MI++G VP +T + + LCK ++ + E+ + +
Sbjct: 425 MYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEM 484
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ + + +VS C +G +++A + E++
Sbjct: 485 IKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 520
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+NV++ LC +GRLR A GV ++M PD Y L+ + LR A ++ +M
Sbjct: 8 HNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMV 66
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
++ + T +++ ++ A L ML +G+A +A TY++L++GLC+ L
Sbjct: 67 SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLD 126
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A + ++ + CR
Sbjct: 127 EAVALVETMAERGCAPTVVTYNSIITGFCR 156
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 138/557 (24%), Positives = 243/557 (43%), Gaps = 48/557 (8%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
KW P E+ L L L+ L LV V+ + H + + FF WA ++ NF H +Y
Sbjct: 74 KWGPDAEKALEVLKLK--LDIRLVREVLKIDVEVH--VKIQFFKWAGKKRNFEHDSTTYM 129
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
++++ L +R + + ++ + + + S I+ L + K KA S+F +VK
Sbjct: 130 ALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMVNKALSIFYQVKGR 189
Query: 149 CEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF-STIGFGVFIWKFCENAKLGQ 207
NS++ +L +G+ + ++++EM G F T+ + I F + +
Sbjct: 190 KCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDS 249
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
+ + DE++ EN + + I ++ + K +VEEA ++ E+R+R C P Y +
Sbjct: 250 AVRLFDEMK--ENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTEL 307
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
G V + V K K G P I L R+ EA EL E +
Sbjct: 308 IRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNC 367
Query: 328 TIDDDVLNALIGSV--SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE-- 383
T + N +I S+ P A + M + G VP+ T S L CK N+ ++
Sbjct: 368 TPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKAL 427
Query: 384 ------------------------LVEVYKVLSANDYFTDMES---------YNVMVSFL 410
L + + +AN+ F +++ Y VM+
Sbjct: 428 LLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHF 487
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
GR EA G+ EMK+ G PDV YN+L+ R D++ A L+ M +GC+ ++
Sbjct: 488 GKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDI 547
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF----E 526
++NI+++ + G + A+ +F M + PDA +Y ++L L + + A E
Sbjct: 548 NSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKE 607
Query: 527 VFNKSVNHDVMLARSIL 543
+ +K +D++ SIL
Sbjct: 608 MNSKGFEYDLITYSSIL 624
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 235/498 (47%), Gaps = 19/498 (3%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
S AL FN AS++PNF+ P Y IL L S + + +L+ +K ++ + +S +
Sbjct: 64 SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLI 123
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PE--ICNSLLAVLASDGYIDNALKMFD-- 178
+I S Q + + SV V + ++ G P+ N +L +L DG N+LK+ +
Sbjct: 124 LIESYAQFELQDEILSV---VDWMIDEFGLKPDTHFYNRMLNLLV-DG---NSLKLVEIS 176
Query: 179 --EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
+MS G++ F V I C +L + ML+++ ++ ++ G+
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSY--GLVPDEKTFTTVMQGY 234
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER-EVVLKKKRKLGVAPR 295
+ ++ A ++ +++ C ++ ++ F G V + + + + G P
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFN 354
+ + GL + A E+ +V++ + D N++I + + + + A+ +
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
MI + P T + L LCK N+ +E E+ +VL++ D+ ++N ++ LC +
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
R A + +EM+ KG +PD YN L+++ C + L A + QM SGC+ ++ TYN
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
LI F + + A +F M GV+ ++ TY +L++GLC+ ++ A ++ ++ +
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 535 DVMLARSILSTFMISLCR 552
+ ++ + CR
Sbjct: 535 GQKPDKYTYNSLLTHFCR 552
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 200/458 (43%), Gaps = 2/458 (0%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
L +W + Y+ +L L + ++ ++ V I D S + +I
Sbjct: 138 LSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIK 197
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
+L + + A + ++ + +++ +G +D AL++ ++M G +
Sbjct: 198 ALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSW 257
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
S + V + FC+ ++ L+ + E+ ++ + L+ +G CK V+ A +
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV-NGLCKAGHVKHAIE 316
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
++D + PD Y V +G V E VL + +P T Y I L
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC 376
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
E ++ EA EL V+ S D N+LI G + + R A+ F M KG P
Sbjct: 377 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T + L +LC + K DE + + K + + + +YN ++ C + + REA + EM
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
+ G+ + YN+L++ C+ + A +L DQM G + TYN L++ F G+I
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 556
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
+ A + M G PD TY +L+ GLC+ ++ A
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 132/320 (41%), Gaps = 40/320 (12%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y+ ++ SL +++ ++LKQ++++ Y +I + T++A +F+E
Sbjct: 436 FTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDE 495
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ + N+L+ L +++A ++ D+M G
Sbjct: 496 MEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG-------------------- 535
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+K + N L+ H FC+G +++A ++ + C+PD + Y
Sbjct: 536 -----------QKPDKYTYNS-----LLTH-FCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ G V +L+ + G+ + Y I GL +R+ EA L ++
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638
Query: 325 GKFTIDDDVLNALI--GSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
D V ++ G + P R A+ F ++EKG VP S+L L++ L +
Sbjct: 639 QNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSME 698
Query: 382 DELVEVYKVLSANDYFTDME 401
+ LV++ ++ F++ E
Sbjct: 699 ETLVKLVNMVMQKARFSEEE 718
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 192/420 (45%), Gaps = 10/420 (2%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
+Y +I +L + N + A S+ N+V + S++ + +D+A ++F+ M
Sbjct: 230 IYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRM 289
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
G E + + I C + ++ + L + E+ R + I+ C
Sbjct: 290 DEEGCEPNAATYSTLINGLCNSGRVNEALDFISEM-TRHGVLPTVHTFTAPIV-ALCDMG 347
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV--LKKKRKLGVAPRTND 298
R+E+A+K+ +++ + CKP+ Y + + G R + + + GV P T
Sbjct: 348 RIEDAWKIFIDMKKKGCKPNVYTYTSL-----ISGQRVSRMAIGLFHRMSRDGVVPNTVT 402
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMI 357
Y + L+ I A + ++ + N LI +I D A+ M+
Sbjct: 403 YNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNML 462
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+ PTL T + + K C +D + V +++ AN D SY ++S C ++
Sbjct: 463 KGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKME 522
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
A G+ EM +GL P+ Y +L+ C+++ L A ++ ++M SGC N++TYN+LI
Sbjct: 523 LASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLI 582
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
++ GA L MLE+ ++PD TY++++ GLC + A E+FNK V H +
Sbjct: 583 HGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCL 642
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/488 (20%), Positives = 198/488 (40%), Gaps = 35/488 (7%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN L Y+S++ +L + +S++ +V + + D+ Y +I + ++
Sbjct: 225 QPNL----LIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLD 280
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
AF +FN + + ++L+ L + G ++ AL EM+ GV + F I
Sbjct: 281 SAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPI 340
Query: 197 WKFCENAKLGQVLSMLDEVRKRE--------NSMINGSVIAVLIIHGFCKGKR------- 241
C+ ++ + +++K+ S+I+G ++ + I F + R
Sbjct: 341 VALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNT 400
Query: 242 ---------------VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
++ A V + + C P+ +Y + + +G + +L
Sbjct: 401 VTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTN 460
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP 346
K P Y I G A + E++ + D+ LI I
Sbjct: 461 MLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISK 520
Query: 347 RS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
A FN M+++G P T + L CK K D + + + + ++++YNV
Sbjct: 521 MELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNV 580
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++ L A + + M + + PDV Y++++ C + A +++++M G
Sbjct: 581 LIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHG 640
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
C NL TY+ LI + G +E A +F + ++G+ PD TY ++E + AF
Sbjct: 641 CLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAF 700
Query: 526 EVFNKSVN 533
+ + +N
Sbjct: 701 DFLGEMIN 708
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 169/412 (41%), Gaps = 43/412 (10%)
Query: 110 VKVNKITLDSSVYRFIIPSLIQGKNTQK-AFSVFNEVKFNCEDIGPEICNSLLAVLASDG 168
+ + K +VY + SLI G+ + A +F+ + + N+L+ VL +
Sbjct: 357 IDMKKKGCKPNVYTYT--SLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENM 414
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK-RENSMINGSV 227
ID+AL +F+ M G +T + I +C + +SML + K R + V
Sbjct: 415 EIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTL---V 471
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+II G+C + A +VL+ ++ C+PD +Y + F + + + +
Sbjct: 472 TYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEM 531
Query: 288 RKLGVAPRTNDYREFILGLIVERRI-CEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP 346
G+ P Y I G + ++ C A+ L
Sbjct: 532 MDRGLCPNEVTYTALISGYCKDEKLDCAARMLER-------------------------- 565
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
M G P + T + L L K+N E+ KV+ D+ +Y+ +
Sbjct: 566 ---------MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTV 616
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
++ LC +G + A + +M + G P++ Y+SL++A +E + A++++ ++ G
Sbjct: 617 INGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGL 676
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ TY +I G+++ A M+ G P TY L++GL E
Sbjct: 677 IPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNE 728
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ + + ++G L T + L L K N + +++ Y + ++ YN +++
Sbjct: 177 ALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVIN 236
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G +R+A +I ++ + G+ PD Y S++ CR L A +++++M GC
Sbjct: 237 ALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEP 296
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N TY+ LI+ G + AL M GV P T+T+ + LC ++ A+++F
Sbjct: 297 NAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIF 356
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 72/128 (56%)
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
++ R+GL P++ YNS++ A C++ +R A+ + +++F SG + TY +I +
Sbjct: 217 HQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRN 276
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
+++ A +F+ M E+G P+A TY++L+ GLC + A + ++ H V+
Sbjct: 277 RDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTF 336
Query: 544 STFMISLC 551
+ +++LC
Sbjct: 337 TAPIVALC 344
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 159/381 (41%), Gaps = 39/381 (10%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
LA G FN + + ++Y +++ +++ +L+++K + + Y
Sbjct: 523 LASGMFNEMMDR-GLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNV- 580
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNC-----EDIGPEIC--NSLLAVLASDGYIDNALKMFD 178
LI G Q FS E+ C E I P++ ++++ L ++G I AL+MF+
Sbjct: 581 ---LIHGLTKQNNFSGAEEL---CKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFN 634
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
+M G + + I + ++ + M E++K+ +I V V +I
Sbjct: 635 KMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQ--GLIPDEVTYVKMIEVCVM 692
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+V+ AF L E+ C+P Y ++ + + E+V K L A T+
Sbjct: 693 SGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL-------QNEMVYHKLVALPNAASTST 745
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVF-----F 353
+ + I+ K++ V+ S +D ++ L ++ S RS F +
Sbjct: 746 FDDQIIN----------KDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLY 795
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
M+ + + P T + +L + K D ++V+K +S + Y ++ LC
Sbjct: 796 RSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQL 855
Query: 414 GRLREAYGVIQEMKRKGLDPD 434
R +EA V ++M + L+ D
Sbjct: 856 HRRKEARFVFEKMLSRALNAD 876
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ Q+ G NL YN +I+ + G + A + + + + G+ PD TYTS++ G C+
Sbjct: 216 YHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCR 275
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+L +AFE+FN+ + ST + LC
Sbjct: 276 NRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLC 309
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 51/112 (45%)
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
++++C + + A D G L TY L+ + +++ + +H +L +G
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ P+ Y S++ LC++ N++ A + NK + ++ ++ CR
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCR 275
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 178/377 (47%), Gaps = 3/377 (0%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
C+S++ L G +D+AL + + M RG + I + C+ K+ + L +
Sbjct: 52 CHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMN 111
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RIRECKPDFIAYRIVAEEFKLMG 275
+ ++ + +++ CK K+V +AF + + R PD ++Y I+ + F +
Sbjct: 112 RTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKID 171
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ E + K+ L P Y F+ GL+ + RI +A+ + E ++S + D +
Sbjct: 172 ELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYS 231
Query: 336 ALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
LI S + A F MI +G P T + L LCK +K DE E+++ +
Sbjct: 232 TLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVER 291
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D +Y ++ C G++ +A V EM KG DPDV YN L++ R A
Sbjct: 292 GCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEA 351
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM-LEKGVAPDATTYTSLLE 513
++L+ M + C + ++NI+I S+ ++ A+ +F M + G +PD TY SL+
Sbjct: 352 RQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIF 411
Query: 514 GLCQETNLQAAFEVFNK 530
GLC E L A +VF +
Sbjct: 412 GLCGEQRLSEAMKVFKE 428
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 161/369 (43%), Gaps = 20/369 (5%)
Query: 187 FSTIGFGVFIWKFCENAKLGQVLS---MLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
+ + + F+ C++ K+ Q + E +G+ +V I CK RV+
Sbjct: 9 LNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSV--IQELCKAGRVD 66
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND---YR 300
A +L+ + R PD + ++ E + E + L+ + ++ R + Y
Sbjct: 67 SALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRT-ISTRASSCFSYN 125
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDV-LNALIGSVSSIDPRS-AIVFFNFMIE 358
+ L +++ +A + +VS + + D V + LI ID A + MI+
Sbjct: 126 SLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMID 185
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
VP ++T + L ++ + + VY+ + + D+ +Y+ ++ + + +
Sbjct: 186 LNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQ 245
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A+ + + M +G P+ YN L+ C+E A +L+ +M GC + TY L+
Sbjct: 246 AHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLY 305
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN--------- 529
F VG+IE A+ +F M+ KG PD Y LL+G + A ++F
Sbjct: 306 GFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKP 365
Query: 530 KSVNHDVML 538
+V+H++M+
Sbjct: 366 DTVSHNIMI 374
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 110/242 (45%), Gaps = 38/242 (15%)
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL--SANDYFTDMESYNV 405
SA+ MI++G P ++T S L LCK +K E E + + + + + SYN
Sbjct: 67 SALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNS 126
Query: 406 MVSFLCTSGRLREAYGVIQEM-KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF-- 462
+++ LC + ++ +A+ + M + + PDV Y+ L++ C+ D L A+KL+ QM
Sbjct: 127 LLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDL 186
Query: 463 ---------------------------------ASGCSGNLKTYNILISKFSEVGEIEGA 489
++GCS ++ TY+ LI FS + + A
Sbjct: 187 NCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQA 246
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
LF M+ +G P+A TY LL GLC+E+ A E+F K V + +T +
Sbjct: 247 HELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYG 306
Query: 550 LC 551
C
Sbjct: 307 FC 308
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 168/403 (41%), Gaps = 7/403 (1%)
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
HS+++ L + ++++ S+L+ + D + + +I L + Q+A +
Sbjct: 53 HSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNR 112
Query: 148 NCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEM-SHRGVEFSTIGFGVFIWKFCENAK 204
NSLL L + A +F M S R V + + + I FC+ +
Sbjct: 113 TISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDE 172
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
LG+ + ++ N + N + + +G + R+ +A V +E+ C PD I Y
Sbjct: 173 LGRAEKLYKQMIDL-NCVPNVTTYNAFL-NGLMRKGRIADAQGVYEEMISAGCSPDVITY 230
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ F L + + + G P Y + GL E + EA EL +V
Sbjct: 231 STLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 290
Query: 325 GKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
D L+ ++ A+ F+ M+ KG P + + L K + K E
Sbjct: 291 RGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGE 350
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR-KGLDPDVSFYNSLM 442
++++V+ + + D S+N+M+ L + RL +A V + M++ G PD+ YNSL+
Sbjct: 351 ARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI 410
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
C E L A K++ ++ S + +N+L+ G
Sbjct: 411 FGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 94/190 (49%), Gaps = 14/190 (7%)
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDME---SYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
LCK K ++ E + + + + + + ++ LC +GR+ A +++ M ++G
Sbjct: 20 GLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLLETMIKRG 79
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQM------FASGCSGNLKTYNILISKFSEVG 484
PD++ ++ L+ C+ D ++ A++ M AS C +YN L++ +
Sbjct: 80 YCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCF----SYNSLLNSLCKAK 135
Query: 485 EIEGALRLFHNML-EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
++ A +F M+ E+ V PD +Y+ L++G C+ L A +++ + ++ + + +
Sbjct: 136 KVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTY 195
Query: 544 STFMISLCRR 553
+ F+ L R+
Sbjct: 196 NAFLNGLMRK 205
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 135/550 (24%), Positives = 237/550 (43%), Gaps = 54/550 (9%)
Query: 45 DSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAID 104
+ ++PS + +++ L S+ L F A Q + HS Y+ ++ L + ID
Sbjct: 57 NPITPSQLCKLLELPLDVPTSMDL--FEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMID 114
Query: 105 SVLKQVKVNKITLDSSVY----RFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSL 160
+LKQ+K S++ R+ + + G+ T+ ++ C + + N +
Sbjct: 115 KLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVY---CFEPTFKSYNVV 171
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
L +L + A +F +M RG+ + FGV + FC ++ S+L ++ K +
Sbjct: 172 LEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTK--H 229
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY---------------- 264
+ S+I ++IH + RV EA K+L+E+ + C+PD +
Sbjct: 230 GCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEA 289
Query: 265 -----RIVAEEFKL--------------MGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
R++ +F MG V E +L K P T Y I G
Sbjct: 290 AKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN----PNTVLYNTLING 345
Query: 306 LIVERRICEAKEL--GEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRV 362
+V R EAK+L ++++G F D N +I G SA+ F + M++KG
Sbjct: 346 YVVSGRFEEAKDLLYKNMVIAG-FEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFE 404
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + T + L CK+ +E +V +SA + YN ++ LC G++++A +
Sbjct: 405 PNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQM 464
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
EM KG PD+ +NSL+ C+ D + A L+ M G N TYN LI F
Sbjct: 465 YGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLR 524
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
+ I+ A +L M +G D TY L++ LC+ + + + ++ + +
Sbjct: 525 LELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINS 584
Query: 543 LSTFMISLCR 552
+ + S CR
Sbjct: 585 CNILINSFCR 594
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/470 (22%), Positives = 213/470 (45%), Gaps = 18/470 (3%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
++ ++K+ + ++++ S+L+ + + +S +Y+ +I +L + +A + E+
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261
Query: 146 -KFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
CE P++ N ++ L G I A K+ D M R + G + C
Sbjct: 262 FLMGCE---PDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRM 318
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVL-DELRIRECKPDF 261
K+ + +ML ++ + N +I+G+ R EEA +L + I +PD
Sbjct: 319 GKVDEARAMLSKIPNPNTVLYN------TLINGYVVSGRFEEAKDLLYKNMVIAGFEPDA 372
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ I+ + G + L + K G P Y I G + EA ++
Sbjct: 373 FTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNS 432
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ + +++ N LIG++ + A+ + M KG P + T ++L LCK +K
Sbjct: 433 MSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDK 492
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+E + +Y+ + + +YN ++ +++A ++ EM+ +G D YN
Sbjct: 493 MEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNG 552
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L++A C+ L +QMF ++ + NILI+ F G++ AL+ +M+++G
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFN----KSVNHDVMLARSILSTF 546
+ PD TY SL+ GLC+ Q A +FN K ++ D + +++S +
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRY 662
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 149/325 (45%), Gaps = 5/325 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N ++ L GY+ +AL+ DEM +G E + I + + I FC+ + +++ +
Sbjct: 376 NIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSA 435
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ S+ +V +I CK ++++A ++ E+ + CKPD + + +
Sbjct: 436 KGLSL--NTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKM 493
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNA 336
E + + GV T Y I + I +A +L GE+ G +D+ N
Sbjct: 494 EEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRG-CPLDNITYNG 552
Query: 337 LIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI ++ + M + P++++ + L + C+ K ++ ++ + +
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D+ +YN +++ LC GR +EA + ++ KG+ PD YN+L+ C E L A
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDAC 672
Query: 456 KLWDQMFASGCSGNLKTYNILISKF 480
+L + ++G N T++ILI+ F
Sbjct: 673 QLLFKGVSNGFIPNEITWSILINYF 697
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/498 (25%), Positives = 220/498 (44%), Gaps = 42/498 (8%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
LA+ FF+WA +Q + H SY+ +L L S V K + + + + ++ +
Sbjct: 9 LAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKIL 68
Query: 126 IPSLIQGKNTQKAFSVFNEV-KFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSH 182
I + +A + +F+ + P+ I N L+ L DG D A+K+F+ M
Sbjct: 69 IRGNCKAGQATRALEFLRALDEFS---VAPDVYIFNFLIHGLFKDGNPDQAVKLFENMES 125
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE-VRKRENSMINGSVIAVLIIHGFCKGKR 241
V + I C++ L + +L+E +R+ S + LI G CK
Sbjct: 126 SRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGD 185
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
VEEA ++LD +++ PD I Y + + G V E +LK + +P +
Sbjct: 186 VEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKT---MSCSPDLVTFNT 242
Query: 302 FILG----------LIVERRICEAKELGEVIVSGKFTIDDDVLNAL--IGSVSSIDPRSA 349
+ G L V +C L +VI +TI ++N L +G V + A
Sbjct: 243 LLDGFCKAGMLPRALEVLEEMCRENILPDVIT---YTI---LVNGLCRVGQV-----QVA 291
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES------- 402
++ +G +P + ++L LCK + +E ++ K +SA + +M S
Sbjct: 292 FYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPL 351
Query: 403 --YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
YN+++ L G + +A +I ++ +G PDV YN+L++ C+ + +R A L D+
Sbjct: 352 FTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADE 411
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M + GC N T ++ VG ++ A L M K AP+ YTSL++GLC+
Sbjct: 412 MASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDR 471
Query: 521 LQAAFEVFNKSVNHDVML 538
+ A V + V L
Sbjct: 472 MDDACVVLDAMRGQGVAL 489
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 189/426 (44%), Gaps = 28/426 (6%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLL-A 162
+ + ++ +++ D Y +I L + N +KA + E+ P+I N+L+ A
Sbjct: 119 LFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINA 178
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
+ DG ++ AL++ D M G I + I C ++ + +L + + +
Sbjct: 179 GICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCSPDLV 238
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+ ++ GFCK + A +VL+E+ PD I Y I+ +G V
Sbjct: 239 TFNT-----LLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFY 293
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-----GEVIVSGKFTID------- 330
+L++ + G P Y + GL I EA +L I++ +I+
Sbjct: 294 LLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFT 353
Query: 331 -DDVLNALI--GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
+ VL LI GS+S A+ + ++ +G VP + T + L LCK N+ E ++
Sbjct: 354 YNIVLGGLIKDGSISK-----AVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDL 408
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
+++ F + + +V LC GR+ +A+ ++ EM RK P+V Y SL++ C+
Sbjct: 409 ADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCK 468
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
D + A + D M G + + Y LI G + A+ ++ M+ +G PD +T
Sbjct: 469 SDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGST 528
Query: 508 YTSLLE 513
+L E
Sbjct: 529 SKTLEE 534
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 112/235 (47%), Gaps = 13/235 (5%)
Query: 326 KFTIDDDV--LNALI-GSVSSIDPRSAIVFFNFMIEKGRV-PTLSTLSNLSKNLCKRN-- 379
+F++ DV N LI G +P A+ F M E RV P + T + + LCK
Sbjct: 90 EFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENM-ESSRVNPDIFTYNTVISGLCKSGNL 148
Query: 380 -KSDELVEVYKVLSANDYFTDMESYNVMV-SFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
K+ EL+E + D+ +YN ++ + +C G + EA ++ MK G PDV
Sbjct: 149 EKARELLE-EMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVIT 207
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
YNS++ A C + A ++ M CS +L T+N L+ F + G + AL + M
Sbjct: 208 YNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMC 264
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ + PD TYT L+ GLC+ +Q AF + + V + ++ + LC+
Sbjct: 265 RENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCK 319
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 123/299 (41%), Gaps = 16/299 (5%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+LL G + AL++ +EM + I + + + C ++ +L+E+ +
Sbjct: 241 NTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVR 300
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC---------KPDFIAYRIVA 268
+ I + ++ G CK +EEA K++ E+ RE P Y IV
Sbjct: 301 Q--GYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVL 358
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS-GKF 327
GS+ + ++ G P Y I GL R+ EA +L + + S G F
Sbjct: 359 GGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCF 418
Query: 328 TIDDDVLNALIG--SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
D + + + G V +D ++V M K P + ++L LCK ++ D+
Sbjct: 419 PNDVTLGSVVFGLCRVGRVDDAWSLVVE--MSRKRHAPNVVVYTSLIDGLCKSDRMDDAC 476
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
V + D +Y ++ + GR+ EA + EM +G PD S +L EA
Sbjct: 477 VVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEA 535
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
++ G DV YN L++ + K++ + SGCS NL T+ ILI + G+
Sbjct: 19 EQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSI 542
AL + E VAPD + L+ GL ++ N A ++F + VN D+ ++
Sbjct: 79 TRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTV 138
Query: 543 LSTFMISLCR 552
+S LC+
Sbjct: 139 IS----GLCK 144
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 212/464 (45%), Gaps = 9/464 (1%)
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
FN N T + ++ IL SL ++ + S+ +Q+++N I D + +I
Sbjct: 57 FNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFS 116
Query: 131 QGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTI 190
Q +FSVF ++ D N+L+ L G+I AL D++ +G +
Sbjct: 117 QLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQV 176
Query: 191 GFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN-GSVIAVLIIHGFCKGKRVEEAFKVL 249
+G I C K+G++ + L +++ + ++ +V+ +II CK K V +AF +
Sbjct: 177 SYGTLINGLC---KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLY 233
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
++ + PD + F +MG + E +L K + PR + + E
Sbjct: 234 SQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKE 293
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLS 366
++ EAK + V + +D N+L+ V I+ I F+ M +G + +
Sbjct: 294 GKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDI--FDSMASRGVIANVQ 351
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
+ + + LCK DE V +++ + ++ +YN ++ L G++ ++ EM
Sbjct: 352 SYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEM 411
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
+G P++ YNS+++A C+ + A L + G ++ TY +LI + G++
Sbjct: 412 HDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKL 471
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
E A ++F ++L KG D TYT +++G C + AA + +K
Sbjct: 472 EDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSK 515
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 6/231 (2%)
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
IVS FT N LI S + S + F +++KG P T + L K LC +
Sbjct: 101 IVSDFFT-----FNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGH 155
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+ + + + A + D SY +++ LC GR+ A +++ + K + P+ YN
Sbjct: 156 IHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNM 215
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+++ C+ L+ A L+ QM A S + T N LI F +G+++ A+ L H M+ +
Sbjct: 216 IIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILEN 275
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+ P T++ L++ C+E ++ A + ++ D++L ++ M C
Sbjct: 276 INPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYC 326
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 186/455 (40%), Gaps = 66/455 (14%)
Query: 40 QLGLRDSLSPSLVARVI----NPYLLTHHSL------------ALGFFNWASQQPNFTHS 83
QLGL +SLS S+ +++ +P +T ++L AL F + Q F
Sbjct: 117 QLGL-NSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQ-GFHLD 174
Query: 84 PLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
+SY +++ L +I A +LK+V + ++ +Y II ++ + K AF +++
Sbjct: 175 QVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYS 234
Query: 144 EVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
++ + I P+ CNSL+ G + A+ + +M + F + + FC+
Sbjct: 235 QMV--AKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCK 292
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
K+ + ML K++ +I V ++ G+C K + +A + D + R +
Sbjct: 293 EGKVKEAKMMLGVTMKKD--IILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANV 350
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI-CEAKELGE 320
+Y + + V E + ++ R + P Y I GL +I C K + E
Sbjct: 351 QSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDE 410
Query: 321 VIVSGK---FTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ G+ + +L+AL + +D AI + ++G P + T + L K LC+
Sbjct: 411 MHDRGQPPNIITYNSILDALCKN-HHVD--KAIALLTNLKDQGIRPDMYTYTVLIKGLCQ 467
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI-------------- 423
K ++ +V++ L Y D+ +Y VM+ C G A ++
Sbjct: 468 SGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKT 527
Query: 424 ---------------------QEMKRKGLDPDVSF 437
+EM +GL + S+
Sbjct: 528 YEIVILSLFEKDENDMAEKLLREMIARGLLDEKSY 562
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%)
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
+ K P + +N ++ + + A L QM +G + T+NILI+ FS++G
Sbjct: 61 LHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGL 120
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
+ +F +L+KG P+A T+ +L++GLC + ++ A +K V L + T
Sbjct: 121 NSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGT 180
Query: 546 FMISLCR 552
+ LC+
Sbjct: 181 LINGLCK 187
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 204/459 (44%), Gaps = 8/459 (1%)
Query: 82 HSPLS---YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
H P S + +L S++ + + + S+ Q+ + + +I S A
Sbjct: 51 HPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFA 110
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
FSV ++ P +L+ L +G I AL +FD+M G + + + +G I
Sbjct: 111 FSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLING 170
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSV-IAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
C K+G + + +R E V I II CK ++V EAF + ++ +
Sbjct: 171 LC---KVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGI 227
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
PD Y + + +L + + P + + L E ++ EA E
Sbjct: 228 SPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHE 287
Query: 318 LGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+ ++++ D L+ G + A+ F+ M+ KG P + + + L C
Sbjct: 288 IVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYC 347
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K +K D+ + +++ + ++ D ++YN ++ LC GRL++A + EM +G PD+
Sbjct: 348 KIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLV 407
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
Y+ L+++ C+ L A L + AS + +++ YNI+I GE+E A LF N+
Sbjct: 408 TYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNL 467
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
KG+ P TY ++ GLC+ L A ++F + +D
Sbjct: 468 SSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGND 506
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 205/448 (45%), Gaps = 13/448 (2%)
Query: 75 SQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN 134
QP+ P ++ ++++ L + +I + ++ + Y +I L + N
Sbjct: 121 GHQPD----PTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGN 176
Query: 135 TQKAFSVFNEV-KFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
T A + + + NC+ P+ I S++ L D + A +F +M +G+
Sbjct: 177 TSAAIRLLRSMEQGNCQ---PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ + C + V ++L+++ + ++ VI ++ CK +V EA +++D
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSK--ILPDVVIFSTVVDALCKEGKVTEAHEIVDM 291
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ R +PD + Y + + L + E V + G AP Y I G +
Sbjct: 292 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK 351
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSN 370
I +A L E + ++ D N L+ + + + AI F+ M+ +G++P L T S
Sbjct: 352 IDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSI 411
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L +LCK +E + + K + A++ D++ YN+++ +C +G L A + + KG
Sbjct: 412 LLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKG 471
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L P V YN ++ C+ LL A KL+ +M + CS + TYN + F + E A+
Sbjct: 472 LHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAI 531
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+L ML +G + D +T T L+E L +
Sbjct: 532 QLLEEMLARGFSADVSTTTLLVEMLSDD 559
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 173/385 (44%), Gaps = 5/385 (1%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D+AL F+ + H S + F + + VLS+ ++ ++ + +V
Sbjct: 37 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQM---DSFGVPPNVYT 93
Query: 230 V-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+ ++I+ FC RV AF VL ++ +PD + + + G + E + K
Sbjct: 94 LNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 153
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPR 347
G P Y I GL A L + G D + ++I S+
Sbjct: 154 DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVT 213
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A F+ M+ +G P + T ++L LC + + + + + D+ ++ +V
Sbjct: 214 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 273
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
LC G++ EA+ ++ M ++G++PDV Y +LM+ C + + A K++D M G +
Sbjct: 274 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 333
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
++ +Y LI+ + ++ +I+ A+ LF M K PD TY +L+ GLC LQ A +
Sbjct: 334 PDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIAL 393
Query: 528 FNKSVNHDVMLARSILSTFMISLCR 552
F++ V M S + SLC+
Sbjct: 394 FHEMVARGQMPDLVTYSILLDSLCK 418
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 190/419 (45%), Gaps = 49/419 (11%)
Query: 154 PEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
PE CN++L+ L +D A+++F E+ H+ V + + + C+ ++ + D
Sbjct: 232 PEACNAVLSRLP----LDEAIELFQELPHKNV----CSYNILLKALCDAGRVKDARQLFD 283
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV------ 267
E+ + + G ++IHG C +E A K+LDE+ +P+ Y V
Sbjct: 284 EMASAPDVVTYG-----ILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCD 338
Query: 268 ----AEEFKLMGSVFEREVVLKKK-------------------------RKLGVAPRTND 298
++ +++ + +R+V+L + ++ G+A
Sbjct: 339 KGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVT 398
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMI 357
Y I GL + EA++L + + + + +D+ LI G A N M+
Sbjct: 399 YTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMV 458
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
++G P + T + L+ LCK+ E+ +S + +YN +++ LC +G L
Sbjct: 459 QRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLE 518
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+A + +M L PDV Y +L++A C+ L A L +M G + TYN+L+
Sbjct: 519 QAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLM 578
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+ F G +EG +L MLEK + P+A TY SL++ C E N+++ E++ + DV
Sbjct: 579 NGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDV 637
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/466 (22%), Positives = 200/466 (42%), Gaps = 7/466 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY+ +LK+L + ++ + ++ D Y +I + A + +E+
Sbjct: 261 SYNILLKALCDAGRVKDARQLFDEMASAP---DVVTYGILIHGHCALGELENAVKLLDEM 317
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + S++A+L G+I +AL++ ++M R V + + FC L
Sbjct: 318 VAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDL 377
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
DE++++ + V +I+G C+ +EEA K+L E+ R D + Y
Sbjct: 378 VSARRWFDEMQRK--GLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYT 435
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
++ + + G + E + + GV P Y GL + + A EL + +
Sbjct: 436 VLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNK 495
Query: 326 KFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
++ N+LI + A+ M P + T + L LCK D
Sbjct: 496 GLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRA 555
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+ + + + +YNV+++ C SGR+ ++ M K + P+ + YNSLM+
Sbjct: 556 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQ 615
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C E+ ++ +++ M + N TYNILI + ++ AL M++KG
Sbjct: 616 YCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLT 675
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
AT+Y++L+ L ++ A E+F+ + + + A S + F I L
Sbjct: 676 ATSYSALIRLLNKKKKFVEARELFH-DMRKEGLTAESDVYDFYIDL 720
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 124/254 (48%), Gaps = 2/254 (0%)
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIE 358
Y + L R+ +A++L + + S + +L + G + + +A+ + M+
Sbjct: 262 YNILLKALCDAGRVKDARQLFDEMASAPDVVTYGIL--IHGHCALGELENAVKLLDEMVA 319
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
G P + +++ LC + + + V + + D Y ++S C G L
Sbjct: 320 GGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVS 379
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A EM+RKGL D Y +++ CR L A+KL +M+A + TY +LI
Sbjct: 380 ARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLID 439
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+ + G++ A ++ + M+++GV P+ TYT+L +GLC++ ++QAA E+ ++ N + L
Sbjct: 440 GYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLEL 499
Query: 539 ARSILSTFMISLCR 552
++ + LC+
Sbjct: 500 NACTYNSLINGLCK 513
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 7/173 (4%)
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
DE +E+++ L ++ SYN+++ LC +GR+++A + EM PDV Y L
Sbjct: 245 DEAIELFQELP----HKNVCSYNILLKALCDAGRVKDARQLFDEMASA---PDVVTYGIL 297
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ C L A KL D+M A G N Y +++ + G I ALR+ +M+++ V
Sbjct: 298 IHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKV 357
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRV 554
D YT++L G C + +L +A F++ + +T + LCR V
Sbjct: 358 ILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAV 410
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/264 (18%), Positives = 100/264 (37%), Gaps = 41/264 (15%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
Q T + ++Y ++ L + A + +L ++ + L++ Y +I L + +
Sbjct: 459 QRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLE 518
Query: 137 KAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+A ++ C + P++ +L+ L G +D A + EM +G++ + + + V
Sbjct: 519 QAMRTMADMDTAC--LKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNV 576
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
+ +GFC RVE K+LD +
Sbjct: 577 LM-------------------------------------NGFCMSGRVEGGKKLLDWMLE 599
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
+ P+ Y + +++ + ++ + K R V P N Y I G R + E
Sbjct: 600 KNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKE 659
Query: 315 AKELGEVIVSGKFTIDDDVLNALI 338
A + ++ F + +ALI
Sbjct: 660 ALYFHDEMIQKGFRLTATSYSALI 683
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 168/373 (45%), Gaps = 38/373 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+LL+ L S I +A+K+FDEM G E I + I C K+G L ++K
Sbjct: 14 NTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLC---KMGNTTMALQLLKK 70
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E +V+A II CK + V EA E+ PD Y + F +G
Sbjct: 71 MEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGR 130
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
V E + K+ + V P + I GL +R I EA
Sbjct: 131 VNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEA--------------------- 169
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ F M EKG P + T + L C R++ DE +++ ++
Sbjct: 170 -------------WLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGC 216
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ SYN++++ C SGR+ EA G++ EM K L PD+ Y++LM C+ + A++
Sbjct: 217 APNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQE 276
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L +M + G NL TY+I++ + G ++ A L M E + P+ YT L+EG+C
Sbjct: 277 LLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMC 336
Query: 517 QETNLQAAFEVFN 529
L+AA E+F+
Sbjct: 337 TFGKLEAARELFS 349
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 193/433 (44%), Gaps = 13/433 (3%)
Query: 85 LSYHSILKSL-SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
++++++L L S ++ ++A+ + VK+ D Y II L + NT A +
Sbjct: 11 VTFNTLLSGLCSKAKIMDAVKLFDEMVKMGH-EPDVITYSTIINGLCKMGNTTMALQLLK 69
Query: 144 EVKFNCEDIG--PEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
++ E+ G P + N+++ L D + A+ F EM G+ + + F
Sbjct: 70 KM----EEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGF 125
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
C ++ + S+ ++ +R ++I V ++I G CK + + EA+ V + + + +P
Sbjct: 126 CNLGRVNEATSLFKQMVER--NVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D Y + + + + E + + + G AP Y I G RI EAK L
Sbjct: 184 DVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLL 243
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ T D + L+ + P+ A M G +P L T S + LCK
Sbjct: 244 AEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKH 303
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
DE E+ K + + ++ Y +++ +CT G+L A + + KG+ P V Y
Sbjct: 304 GHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTY 363
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
++ + L A +L+ +M +GC N TYN++I F G+ A+RL M+
Sbjct: 364 TVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVG 423
Query: 499 KGVAPDATTYTSL 511
KG + D++T+ L
Sbjct: 424 KGFSADSSTFRML 436
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 145/322 (45%), Gaps = 34/322 (10%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
++ G C ++ +A K+ DE+ +PD I Y + MG+ +LKK + G
Sbjct: 16 LLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKG 75
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
P Y I L +R + EA +
Sbjct: 76 CKPNVVAYNTIIDSLCKDRLVTEAMD---------------------------------- 101
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
FF+ M+++G P + T S++ C + +E ++K + + + ++ +++ LC
Sbjct: 102 FFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLC 161
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+ EA+ V + M KGL+PDV YN+L++ C + A+KL++ M GC+ N++
Sbjct: 162 KKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVR 221
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
+YNILI+ + G I+ A L M K + PD TY++L+ G CQ Q A E+ +
Sbjct: 222 SYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEM 281
Query: 532 VNHDVMLARSILSTFMISLCRR 553
++ ++ S + LC+
Sbjct: 282 CSYGLLPNLITYSIVLDGLCKH 303
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 97/173 (56%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M + G PTL T + L LC + K + V+++ + + D+ +Y+ +++ LC G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
A ++++M+ KG P+V YN+++++ C++ L+ A + +M G ++ TY+
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ F +G + A LF M+E+ V P+ T+T L++GLC++ + A+ VF
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVF 173
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 178/434 (41%), Gaps = 51/434 (11%)
Query: 56 INPYLLTHHSLALGFFNWA---------SQQPNFTHSP--LSYHSILKSLSLSRQINAID 104
+ P L+T ++L G + A + H P ++Y +I+ L
Sbjct: 6 LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL 65
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEI--CNSLL 161
+LK+++ + Y II SL + + +A F+E VK E I P++ +S+L
Sbjct: 66 QLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVK---EGIPPDVFTYSSIL 122
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL------------ 209
+ G ++ A +F +M R V + + F + I C+ + +
Sbjct: 123 HGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLE 182
Query: 210 ----------------SMLDEVRKRENSMI-NGSVIAV----LIIHGFCKGKRVEEAFKV 248
S +DE +K N M G V ++I+G CK R++EA +
Sbjct: 183 PDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGL 242
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
L E+ + PD Y + F +G E + +LK+ G+ P Y + GL
Sbjct: 243 LAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCK 302
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLST 367
+ EA EL + + K + + LI + + +A F+ + KG PT+ T
Sbjct: 303 HGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVT 362
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ + L K S+E E+++ ++ N + +YNV++ +G A +I+EM
Sbjct: 363 YTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMV 422
Query: 428 RKGLDPDVSFYNSL 441
KG D S + L
Sbjct: 423 GKGFSADSSTFRML 436
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 81/155 (52%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
++N ++S LC+ ++ +A + EM + G +PDV Y++++ C+ A +L +M
Sbjct: 12 TFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKM 71
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
GC N+ YN +I + + A+ F M+++G+ PD TY+S+L G C +
Sbjct: 72 EEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRV 131
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
A +F + V +V+ + + + LC++ +I
Sbjct: 132 NEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMI 166
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M + GL P + +N+L+ C + + A KL+D+M G ++ TY+ +I+ ++G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH----DVMLARS 541
AL+L M EKG P+ Y ++++ LC++ + A + F++ V DV S
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 542 ILSTF 546
IL F
Sbjct: 121 ILHGF 125
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 198/445 (44%), Gaps = 7/445 (1%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y+ +L L+ +I ++S ++ I D + +I +L + + + A + E+
Sbjct: 164 YNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMS 223
Query: 147 FNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+C D+ P+ +L+ +G I+ AL++ MS G +++ V I +C+ +
Sbjct: 224 -SC-DVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGR 281
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+G L + + + + V ++G C+ V+ A KVL + C+PD Y
Sbjct: 282 VGDALGYIQQ--EIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTY 339
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
V G + E + ++ + G P T + I+ L E ++ EA +L +
Sbjct: 340 STVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTV 399
Query: 325 GKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ + N LI ++ + DP A+ F M G P T + L NLC K +
Sbjct: 400 KGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAK 459
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+++ K + + +YN ++ LC R+ EA V +M G+ + +N+L++
Sbjct: 460 ALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLID 519
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C + + A +L DQM + G N TYN +++ + + G I A + M G
Sbjct: 520 GLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEV 579
Query: 504 DATTYTSLLEGLCQETNLQAAFEVF 528
D TY +L+ GLC+ QAA ++
Sbjct: 580 DVVTYATLINGLCKARRTQAALKLL 604
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 116/536 (21%), Positives = 223/536 (41%), Gaps = 24/536 (4%)
Query: 23 RTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTH 82
R R K+ EQ LR+ P R++N L ++ T
Sbjct: 43 RARFQLKFAAGSEQERLVTALREQADPEAALRMLNSAL--------------ARDDGLTP 88
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS-V 141
S Y I++ L + + + ++ +++ + + + I S + + AF V
Sbjct: 89 SRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDLV 148
Query: 142 FNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
N++ E+ N LL VLA I + EMS +G+E + F I C
Sbjct: 149 SNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCR 208
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ + ML+E+ + + ++ GF + +E A ++ + C P
Sbjct: 209 ARQARTAVLMLEEMSSCD--VAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTS 266
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-KELGE 320
+ ++ + +G V + ++++ G P + F+ GL + A K LG
Sbjct: 267 VTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGL 326
Query: 321 VIVSG---KFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
++ G V+N L + ++ IV N M++ G +P +T + L LC
Sbjct: 327 MLQEGCEPDVYTYSTVINCLCNN-GELEEAKGIV--NQMVDSGCLPDTTTFNTLIVALCT 383
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
N+ +E +++ + L+ ++ ++N++++ LC G A + +EMK G PD
Sbjct: 384 ENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVT 443
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
YN L++ C L A L +M SGC + TYN +I + IE A +F M
Sbjct: 444 YNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMD 503
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
G+ +A T+ +L++GLC + A E+ ++ ++ + ++ + C++
Sbjct: 504 VTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQ 559
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 212/476 (44%), Gaps = 21/476 (4%)
Query: 68 LGF-FNWASQQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
LGF F+ ++ H P ++ ++++ L + +I + ++ + Y
Sbjct: 120 LGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGT 179
Query: 125 IIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMS 181
+I L + NT A + + + NC+ P++ S++ L D + A +F +M
Sbjct: 180 LINGLCKVGNTNAAIRLLRSMEQGNCQ---PDVVVYTSIIDSLCKDRQVTEAFNLFSKMV 236
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLII-----HGF 236
+G+ + I C + V ++L N MIN ++ ++I
Sbjct: 237 GQGISPDIFTYTSLIHSLCNLCEWKHVTTLL-------NQMINSKIMPDVVIFSTVVDAL 289
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
CK ++ EA V+D + IR +P+ + Y + + L + E V G AP
Sbjct: 290 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 349
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFM 356
Y I G +R+ +A L E + + + N L+ + AI F+ M
Sbjct: 350 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIALFHEM 409
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
+ G++P L+T L LCK++ DE + + K + ++ D++ Y +++ +C +G L
Sbjct: 410 VAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGEL 469
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
A + + KGL P+V Y ++ CR LL A KL+ +M +GCS + TYN +
Sbjct: 470 EAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTI 529
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
+ E A++L ML +G + D +T T L+E LC + Q+ ++ ++ V
Sbjct: 530 TQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFV 585
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 118/534 (22%), Positives = 217/534 (40%), Gaps = 60/534 (11%)
Query: 58 PYL--LTH---HSLALGFFNWASQQPNFT-----HSPLS---YHSILKSLSLSRQINAID 104
PY L+H HS +L F +F H P S ++ +L S++ ++Q +
Sbjct: 30 PYFSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVF 89
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
S+ Q+ I D +I S AFSV ++ +L+ L
Sbjct: 90 SLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGL 149
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
+G I +AL +FD+M G + + + +G I C K+G + + +R E
Sbjct: 150 CVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLC---KVGNTNAAIRLLRSMEQGNCQ 206
Query: 225 GSVIAVL-IIHGFCKGKRVEEAFKV----------------------------------- 248
V+ II CK ++V EAF +
Sbjct: 207 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTL 266
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
L+++ + PD + + V + G + E V+ GV P Y + G +
Sbjct: 267 LNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCL 326
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLST 367
+ + EA ++ + +V + + N LI I A F M +K +P T
Sbjct: 327 QSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 386
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ L + C + + + ++ + A+ D+ +Y +++ +LC L EA +++ ++
Sbjct: 387 YNTL-MHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 445
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
+DPD+ Y +++ CR L A+ ++ + + G N++TY I+I+ G ++
Sbjct: 446 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLD 505
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
A +LF M G +PD TY ++ +GL Q A ++ + MLAR
Sbjct: 506 EANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQE------MLARG 553
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 176/386 (45%), Gaps = 6/386 (1%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D+AL F+ M H ST+ F + + + V S+ +++ ++ I V
Sbjct: 50 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQM---DSFGIPPDVYT 106
Query: 230 V-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+ ++I+ FC R+ AF VL ++ +PD + + + G + + + K
Sbjct: 107 LNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMI 166
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPR 347
G P Y I GL A L + G D V ++I S+
Sbjct: 167 GEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVT 226
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A F+ M+ +G P + T ++L +LC + + + + + D+ ++ +V
Sbjct: 227 EAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVV 286
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
LC G++ EA+ V+ M +G++P+V YN+LM+ C + + A K++D M +G +
Sbjct: 287 DALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYA 346
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N+ +YN LI+ + ++ ++ A LF M +K + P+ TY +L+ C LQ A +
Sbjct: 347 PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIAL 405
Query: 528 FNKSVNHDVMLARSILSTFMISLCRR 553
F++ V H + + + LC++
Sbjct: 406 FHEMVAHGQIPDLATYRILLDYLCKK 431
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/478 (24%), Positives = 214/478 (44%), Gaps = 33/478 (6%)
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
L R + A ++L ++ + D+ Y ++ + KAF +N + N
Sbjct: 397 LGRMVEA-HNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTL 455
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
N+LL S G ID+AL+++ M +G+ + I + F ++ K + L++ E
Sbjct: 456 TYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKET 515
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
R + + +I+G CK +R+ EA +++D+++ C PD I YR + + +G
Sbjct: 516 LAR--GLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIG 573
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ +L + LG AP + I G + ++ + ++ + + + +
Sbjct: 574 DMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYG 633
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
ALI G D +A + MIEKG VP L S+L ++ K DE V + L
Sbjct: 634 ALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGT 693
Query: 395 DYFTDMES--------------------------YNVMVSFLCTSGRLREAYGVIQEMKR 428
D D+ + +N+++ LC GR+ +A ++ ++K
Sbjct: 694 DMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKD 753
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
KG D Y+SL+ C + A L D M + G + N+ TYN LI + GE+
Sbjct: 754 KGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSR 813
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN---HDVMLARSIL 543
A+ LF + KG++P+A TY +L++ C++ + AF++ + + H + SIL
Sbjct: 814 AVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSIL 871
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 186/394 (47%), Gaps = 37/394 (9%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL LA+ G +D AL++FDEM G S + + + LG +++ +++ +R
Sbjct: 179 LLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM-QRA 237
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
++ + +A++ +CK K V A + ++E+ + + +AY V + +G +
Sbjct: 238 GALPDKFTVAIMA-KAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTND 296
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK-FTIDDDVLNALI 338
+L G +P Y + G E+ + EA+ + + I K +D+ V A+I
Sbjct: 297 ARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVI 356
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
N + GR+ + L N E+V+ L N +
Sbjct: 357 ---------------NGYCQMGRMEDAARLLN------------EMVD--SRLQVNLFV- 386
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
YN+M++ C GR+ EA+ ++ EM G+ PD YNSL++ C++ L+ A + +
Sbjct: 387 ----YNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETY 442
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ M +G + TYN L+ F +G I+ ALRL+ ML+KG+AP+ + ++LL+G +
Sbjct: 443 NTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKS 502
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ A ++ +++ + + +T + LC+
Sbjct: 503 GKTEKALNLWKETLARGLAKNTTTFNTVINGLCK 536
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 173/405 (42%), Gaps = 30/405 (7%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
++++++ L ++ + ++ ++K + D YR + + + +A + NE+
Sbjct: 526 TFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNEL 585
Query: 146 KFNCEDIG--P--EICNSLLA---VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
E++G P E NSL+ + G +++ L EMS+RG+ +T+ +G I
Sbjct: 586 ----ENLGFAPTIEFFNSLITGHFIAKQHGKVNDILF---EMSNRGLSPNTVAYGALIAG 638
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
+C+ L ++ E+ E ++ I ++ F + + +EA VL L +
Sbjct: 639 WCKEGDLHTAYNLYLEMI--EKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMI 696
Query: 259 PDFIAYRIVAEEFKLMGSV--FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
PD A R+ +G V F V + + I GL RI +AK
Sbjct: 697 PDISAPRLE------IGKVANFIDTVAGGNHHSAKIM-----WNIVIFGLCKLGRIEDAK 745
Query: 317 ELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
L + F D+ ++LI G +S A + M+ G P + T ++L L
Sbjct: 746 NLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGL 805
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
CK + V ++K L + +YN ++ C G + EA+ + Q M +G+ P V
Sbjct: 806 CKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTV 865
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
Y+ L+ C + + A KL DQM + N TY LI +
Sbjct: 866 FTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGY 910
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 136/575 (23%), Positives = 246/575 (42%), Gaps = 73/575 (12%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINA 102
L +L P V+++IN ++ T AL FF W S++ + H + S+L L + +
Sbjct: 65 LASTLRPHHVSKIINTHINT--DTALQFFYWISKRHFYKHDMGCFVSMLNRLVKDKILAP 122
Query: 103 IDSV-------------LKQV------------------------------KVNKITLDS 119
D V LK+V K + +T
Sbjct: 123 ADHVRILMIKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQ 182
Query: 120 SVYRFII-----PSLI-----------QGKNTQKAFSVFNEV-KFNCEDIGPE--ICNSL 160
+VY I PSL+ +GK Q+A VFN++ +F D+ P+ SL
Sbjct: 183 NVYAQIFSSGVKPSLLTFNTMINILCKKGK-VQEAVLVFNKIFQF---DLCPDAFTYTSL 238
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
+ + +D A ++FD M G +++ + I C ++G+ + ML+E+ ++
Sbjct: 239 ILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKG- 297
Query: 221 SMINGSVIAVLI-IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
I +V + I C RV++A ++ + + C P Y + G +
Sbjct: 298 --IEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMEL 355
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+ K K G+ P T Y I L E R A ++ + + + N +I
Sbjct: 356 AIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIK 415
Query: 340 SVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
+ +D A+V FN M++ G PT+ T + L KR + ++ ++
Sbjct: 416 GLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEP 475
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D +Y ++S C G+L A EM + G+ P+ Y ++++ C+E + A L+
Sbjct: 476 DERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLF 535
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
++M +GCS +++TYN +IS S+ A + M E+G+ P+ TYTSL+ GLC+
Sbjct: 536 ERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKN 595
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
T AF++F++ + + ++ + LC+
Sbjct: 596 TATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQE 630
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/507 (20%), Positives = 203/507 (40%), Gaps = 40/507 (7%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S L++++++ L ++ V ++ + D+ Y +I + + KAF VF
Sbjct: 196 SLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVF 255
Query: 143 NE-VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ VK C + ++L+ L ++G I A+ M +EM+ +G+E + + V I C+
Sbjct: 256 DRMVKDGC-NPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCD 314
Query: 202 NAKLGQVLSMLDEVRKR---------------------------------ENSMINGSVI 228
++ ++++ + K+ + ++ +V
Sbjct: 315 IGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVT 374
Query: 229 AVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+I+ C R A K+ D + + Y + + M + + VV K
Sbjct: 375 YNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKML 434
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPR 347
K G +P Y I+ + + A ++ D+ LI G
Sbjct: 435 KDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLD 494
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
SA FF M++ G P T + + CK K D + +++ + N +E+YN ++
Sbjct: 495 SATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAII 554
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
S L R EA +M +GL P+ Y SL+ C+ A K++ +M C
Sbjct: 555 SGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCL 614
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N TY LI + G+++ A RL E G P TY++L+ GLC+E A ++
Sbjct: 615 PNAHTYTSLIYGLCQEGKVDAAERL----TENGCEPTIDTYSTLVSGLCREGRSNEASQL 670
Query: 528 FNKSVNHDVMLARSILSTFMISLCRRV 554
+ + I + +++ C+ +
Sbjct: 671 VENMKEKGLSPSMEIYCSLLVAHCKSL 697
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 182/453 (40%), Gaps = 41/453 (9%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
LA+G ++ ++ + ++Y++++ L + + ++ + ++ Y I
Sbjct: 355 LAIGMYHKMLKE-GLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQI 413
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
I L + +KA VFN++ + N+L+ GY++NA + M
Sbjct: 414 IKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNC 473
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
E + I FC+ KL S E+ K S + A +I G+CK +++ A
Sbjct: 474 EPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTA--MIDGYCKEGKIDVA 531
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
+ + + C Y + E E K + G+ P T Y I G
Sbjct: 532 LSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLING 591
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTL 365
L + A F+ M +K +P
Sbjct: 592 L----------------------------------CKNTATNLAFKIFHEMEKKNCLPNA 617
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
T ++L LC+ K V+ + L+ N +++Y+ +VS LC GR EA +++
Sbjct: 618 HTYTSLIYGLCQEGK----VDAAERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVEN 673
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
MK KGL P + Y SL+ A C+ + A ++++ M G +L Y +LI V
Sbjct: 674 MKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSR 733
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
E AL +F ++L+K D +T L++GL QE
Sbjct: 734 AEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQE 766
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 173/433 (39%), Gaps = 22/433 (5%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKV-NKITLDSSVYR 123
+AL F+W ++ +Y+ I+K L +D + K + V NK+ D
Sbjct: 389 GIALKIFDWMEGHGTLANAQ-TYNQIIKGLF------GMDDIEKAMVVFNKMLKDGPSPT 441
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKF-------NCEDIGPEICNSLLAVLASDGYIDNALKM 176
+ + + +N ++ + + N +F NCE C L++ G +D+A
Sbjct: 442 VVTYNTLIVENLKRGY-LNNATRFLYMMKESNCEPDERTYC-ELISGFCKGGKLDSATSF 499
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
F EM G+ + + I +C+ K+ LS+ + R EN II G
Sbjct: 500 FYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFE--RMEENGCSASIETYNAIISGL 557
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
KG R EA K ++ + +P+ I Y + + + + K P
Sbjct: 558 SKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNA 617
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFM 356
+ Y I GL E ++ A+ L E +G D + G A M
Sbjct: 618 HTYTSLIYGLCQEGKVDAAERLTE---NGCEPTIDTYSTLVSGLCREGRSNEASQLVENM 674
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
EKG P++ +L CK K D +E++ +++ + + Y V++ LC R
Sbjct: 675 KEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRA 734
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
EA + Q + +K + D+ + L++ +E K M + C+ +L TY IL
Sbjct: 735 EEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIIL 794
Query: 477 ISKFSEVGEIEGA 489
+ S+VG+ G
Sbjct: 795 ARELSKVGKSIGT 807
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/505 (23%), Positives = 218/505 (43%), Gaps = 34/505 (6%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINA 102
R L+P LV +++ L L + FF WA +Q + H+P Y ++L
Sbjct: 132 FRQKLNPDLVVEILS--FLKSPELCVKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDRV 189
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE----ICN 158
+ L++++ + D V ++ LI+ ++V E +D G + N
Sbjct: 190 PEEFLREIRGD----DKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYN 245
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L+ V +D A + EMS G+ G F C+ K + LS++++
Sbjct: 246 ALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEK---- 301
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+ +++ +I G C+ EEA L+ +R C P+ YRI L+
Sbjct: 302 -EDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRI------LLCGCL 354
Query: 279 EREVVLKKKRKL------GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
++ + + KR L G P + + A +L + + +
Sbjct: 355 NKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYV 414
Query: 333 VLNALIGSVSSIDPRSAIVFF-------NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
V N LIGS+ S V F N M+ G V + + ++ LC K ++
Sbjct: 415 VYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAY 474
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
+V + N + D +Y+ ++ FLC + R+ A+ + +EMK G+ PDV Y L++
Sbjct: 475 KVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCF 534
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
+ +++ A D+M GC + TY LI + + ++ A LF M+ KG P+
Sbjct: 535 SKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNV 594
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNK 530
TYT+L++G C+ N++ A +++ +
Sbjct: 595 ITYTALIDGYCKSGNIEKACQIYAR 619
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 190/447 (42%), Gaps = 28/447 (6%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS--LLAV 163
V+ ++ N D+S Y +I L + AF +F E+K + P++ L+
Sbjct: 476 VIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGT--GVVPDVYTYTILIDC 533
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
+ G I A DEM G E + + + I + + K+ V + L E+ +
Sbjct: 534 FSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKV-SVANELFELMIAKGCFP 592
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
N + +I G+CK +E+A ++ +R PD Y FK+ +V E+
Sbjct: 593 N-VITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMY------FKIKNNVAEK--- 642
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVS 342
P Y + GL ++ +A++L E + + V +ALI G
Sbjct: 643 ----------PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCK 692
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
+ A F+ M+E+G P + T S+L L K + D +++V + N ++
Sbjct: 693 AAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVI 752
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y M+ L + EAY ++ M+ KG P+V Y ++++ + + +L+ +M
Sbjct: 753 YTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMG 812
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
+ GC+ N TY +LI+ G ++ A L M + ++Y ++EG +E L
Sbjct: 813 SKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILS 872
Query: 523 AAF--EVFNKSVNHDVMLARSILSTFM 547
EV ++L + ++ F+
Sbjct: 873 LGLLEEVEKNGSAPTILLYKVLIDNFV 899
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/469 (20%), Positives = 191/469 (40%), Gaps = 27/469 (5%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +L +Q+ +L + +++ ++ + + + A+ + ++
Sbjct: 345 TYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKM 404
Query: 146 KFNCE-DIGPEICNSLLAVLASDGYIDN------ALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ CE G + N L+ + S G + A K ++EM G + + F
Sbjct: 405 E-KCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARC 463
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C K + ++ E+ N + + +I C RVE AF + E++
Sbjct: 464 LCGFGKFEKAYKVIHEMMG--NGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVV 521
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD Y I+ + F G + + L + + G P Y I + +++ A EL
Sbjct: 522 PDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANEL 581
Query: 319 GEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
E++++ + ALI G S + A + M +P + + N+ +
Sbjct: 582 FELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAE 641
Query: 378 RNKS-------DELVEVYKVLSANDYFTDMES---------YNVMVSFLCTSGRLREAYG 421
+ D L + +KV A D M Y+ ++ C + +L EA
Sbjct: 642 KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQE 701
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
V +M +G +P+V Y+SL++ ++ L K+ +M + C+ N+ Y +I S
Sbjct: 702 VFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+V + + A +L M EKG P+ TYT++++G + + E+F +
Sbjct: 762 KVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFRE 810
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/494 (20%), Positives = 210/494 (42%), Gaps = 25/494 (5%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F +Y ++ L + ++ + K++K + D Y +I + ++A
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQA 543
Query: 139 FSVFNE-VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
+ +E V+ CE P + +L+ + A ++F+ M +G + I +
Sbjct: 544 HNWLDEMVRDGCE---PTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTAL 600
Query: 196 IWKFCENAKLGQVLSMLDEVR------------KRENSMINGSVIAVL--IIHGFCKGKR 241
I +C++ + + + +R K +N++ + ++ G CK +
Sbjct: 601 IDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHK 660
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
V++A +L+ + + C+P+ I Y + + F + E + V K + G P Y
Sbjct: 661 VKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSS 720
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKG 360
I L ++R+ ++ ++ + + +I +S + A M EKG
Sbjct: 721 LIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKG 780
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P + T + + K K D+ +E+++ + + + +Y V+++ C +G L EAY
Sbjct: 781 CKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAY 840
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+++EMK+ VS Y ++E RE +L + L +++ +G + + Y +LI F
Sbjct: 841 ALLEEMKQTYWPKHVSSYCKVIEGYKREFIL--SLGLLEEVEKNGSAPTILLYKVLIDNF 898
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDA--TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+ G +E AL L ++ ++ A YTSL+ + + AFE+F + V+
Sbjct: 899 VKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIP 958
Query: 539 ARSILSTFMISLCR 552
++ L R
Sbjct: 959 DLGTFVHLLMGLIR 972
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 81/192 (42%), Gaps = 3/192 (1%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G PT T + L + + +K D V++ +S D + LC G+ REA
Sbjct: 236 GYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREA 295
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+I+ ++ P+ YN ++ C A ++M ++ C N++TY IL+
Sbjct: 296 LSLIE---KEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCG 352
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
++ R+ M+ +G P T + SL+ C+ + A+++ K +
Sbjct: 353 CLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPG 412
Query: 540 RSILSTFMISLC 551
+ + + S+C
Sbjct: 413 YVVYNILIGSIC 424
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 180/375 (48%), Gaps = 9/375 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR- 216
N + L G + A ++ +M RG I + I +C+ +L +VL +++E++
Sbjct: 257 NIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQI 316
Query: 217 --KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+ N VI +L CK +V EA +VL E+ PD + Y + + F +
Sbjct: 317 KGLKPNPYTYNGVILLL-----CKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 371
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G+V + + +K ++P Y I GL R+ EA +L +V + D+
Sbjct: 372 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 431
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
ALI G + A N M++ G P + T + L+ LCK + D E+ +
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 491
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
++ +YN +V+ LC +G + +A ++++M+ G PD Y +LM+A C+ +
Sbjct: 492 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 551
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A +L QM + T+N+L++ F G +E +L MLEKG+ P+ATTY SL++
Sbjct: 552 AHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIK 611
Query: 514 GLCQETNLQAAFEVF 528
C N++A E++
Sbjct: 612 QYCIRNNMRATTEIY 626
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 129/549 (23%), Positives = 240/549 (43%), Gaps = 36/549 (6%)
Query: 7 TDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSL 66
++L RIS AI R+ P R+ E + L+ ++N + + L
Sbjct: 63 SELVHRISIAI--KQRRSEPLRRVLKPYESKFR--------ADHLIWVLMN--IKNDYRL 110
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
L FF WA L L++ + QI LK + K+ D ++
Sbjct: 111 VLSFFEWAC---------LRRDPSLEARCIVAQIATASKDLKMAR--KLIQDF----WVN 155
Query: 127 PSLIQGKNTQKAFSVFNE-VKFNCEDIG--PEICNSLLAVLASDGYIDNALKMFDEMSHR 183
P+L G +F F E + + +D G P + + VL G +D A K+FD+M +
Sbjct: 156 PNLDVGV----SFGHFVEQLIYTYKDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNY 211
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G+ S +FI E+ G +++ V E + + +I H C+ RV
Sbjct: 212 GLLISVDSCNLFISHLSEDLD-GIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVV 270
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
EA ++L ++ +R C PD I+Y V + +G + ++++ + G+ P Y I
Sbjct: 271 EAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVI 330
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRV 362
L L ++ EA+ + ++S D + LI + + SA F+ M ++
Sbjct: 331 LLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKIS 390
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P T + + LC+ + E +++ + D +Y ++ C G+++EA+ +
Sbjct: 391 PDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSL 450
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+M + GL P++ Y +L + C+ + A +L +M G N+ TYN L++ +
Sbjct: 451 HNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCK 510
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
G I+ A++L +M G PDA TYT+L++ C+ + A E+ + ++ ++
Sbjct: 511 AGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVT 570
Query: 543 LSTFMISLC 551
+ M C
Sbjct: 571 FNVLMNGFC 579
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 158/359 (44%), Gaps = 3/359 (0%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G + LK+ +EM +G++ + + I C+ K+ + +L E+ + V
Sbjct: 302 GELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISE--GIAPDGV 359
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
I +I GFCK V A+++ DE++ R+ PDFI Y V G V E + + +
Sbjct: 360 IYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM 419
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDP 346
+ P Y I G E ++ EA L ++ T + AL G +
Sbjct: 420 VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEV 479
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+A + M KG + T ++L LCK D+ V++ K + + D +Y +
Sbjct: 480 DTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 539
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ C S + A+ ++++M + L P V +N LM C +L +KL M G
Sbjct: 540 MDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGI 599
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
N TYN LI ++ + ++ M KGV PD TY L++G C+ N++ A+
Sbjct: 600 MPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW 658
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/462 (22%), Positives = 198/462 (42%), Gaps = 3/462 (0%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY+ I SL ++ +L Q+++ D Y +I Q Q+ + E+
Sbjct: 255 SYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEM 314
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ P N ++ +L G + A ++ EM G+ + + I FC+ +
Sbjct: 315 QIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNV 374
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ DE++KR+ S + +I G C+ RV EA K+ E+ + +PD + Y
Sbjct: 375 SSAYRLFDEMQKRKIS--PDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYT 432
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + + G + E + + ++G+ P Y GL + A EL +
Sbjct: 433 ALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK 492
Query: 326 KFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
++ N+L+ G + + A+ M G P T + L CK +
Sbjct: 493 GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRA 552
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
E+ + + + + ++NV+++ C SG L + +++ M KG+ P+ + YNSL++
Sbjct: 553 HELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQ 612
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C + +R +++ M A G + TYNILI + ++ A L +M+ KG
Sbjct: 613 YCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLT 672
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
++Y +L++G + A E+F + ++ R I + F
Sbjct: 673 VSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIF 714
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 191/434 (44%), Gaps = 11/434 (2%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PN P +Y+ ++ L + ++ + VL+++ I D +Y +I + N
Sbjct: 320 KPN----PYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVS 375
Query: 137 KAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
A+ +F+E++ I P+ +++ L G + A K+F EM + +E + +
Sbjct: 376 SAYRLFDEMQK--RKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTA 433
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
I +C+ K+ + S+ +++ + + V + G CK V+ A ++L E+
Sbjct: 434 LIDGYCKEGKMKEAFSLHNQMLQM--GLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 491
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
+ + + Y + G++ + ++K G P Y + R +
Sbjct: 492 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 551
Query: 315 AKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
A EL ++ + N L+ G S +M+EKG +P +T ++L K
Sbjct: 552 AHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIK 611
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
C RN E+Y+ + A D +YN+++ C + ++EA+ + ++M KG +
Sbjct: 612 QYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNL 671
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
VS YN+L++ + A++L++QM G + + YNI + G++E L L
Sbjct: 672 TVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELC 731
Query: 494 HNMLEKGVAPDATT 507
+EK + D T
Sbjct: 732 DEAIEKCLVGDIQT 745
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 91/452 (20%), Positives = 190/452 (42%), Gaps = 9/452 (1%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY +++ ++ + +++++++ + + Y +I L + +A V E
Sbjct: 289 ISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLRE 348
Query: 145 VKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ E I P+ I +L+ G + +A ++FDEM R + I + I C+
Sbjct: 349 MI--SEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQT 406
Query: 203 AKLGQVLSMLDE-VRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
++ + + E V KR + V +I G+CK +++EAF + +++ P+
Sbjct: 407 GRVMEADKLFHEMVCKR---LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNI 463
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ Y +A+ G V +L + + G+ Y + GL I +A +L +
Sbjct: 464 VTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKD 523
Query: 322 IVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ F D L+ + S + A M+++ PT+ T + L C
Sbjct: 524 MEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGM 583
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
++ ++ K + + +YN ++ C +R + + M KG+ PD + YN
Sbjct: 584 LEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNI 643
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L++ C+ ++ A L M G + + +YN LI F + + A LF M +G
Sbjct: 644 LIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREG 703
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
+ D Y + E ++ E+ ++++
Sbjct: 704 LVADREIYNIFADINYDEGKMELTLELCDEAI 735
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 140/349 (40%), Gaps = 40/349 (11%)
Query: 210 SMLDEVRKRENSMIN-GSVIAV-----LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
MLDE RK + M+N G +I+V I H ++ A KV E + +
Sbjct: 196 GMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTAS 255
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y I+ +G V E +L + G P Y I G C+ EL V+
Sbjct: 256 YNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGY------CQVGELQRVL- 308
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
LI M KG P T + + LCK K E
Sbjct: 309 ------------KLIEE---------------MQIKGLKPNPYTYNGVILLLCKTGKVAE 341
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
V + + + D Y ++ C G + AY + EM+++ + PD Y +++
Sbjct: 342 AERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVIC 401
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C+ + A KL+ +M + TY LI + + G+++ A L + ML+ G+ P
Sbjct: 402 GLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTP 461
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ TYT+L +GLC+ + A E+ ++ + L ++ + LC+
Sbjct: 462 NIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCK 510
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 210/437 (48%), Gaps = 8/437 (1%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
Y +I I+ N ++A + +E+ + N+++ +A G + A+ +F+EM
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
G+E T + + I + ++ + + +L E++ R+ + ++I G C
Sbjct: 408 LMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK--LTPSPFTYSVLISGLCHSS 465
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV-VLKKKRKLGVAPRTNDY 299
+++A +VLD++ KP+ Y + + + + S +E + +LK GV P Y
Sbjct: 466 DLQKANEVLDQMIRNGVKPNVFMYGTLIKAY-VQESRYEMAIELLKIMIANGVLPDLFCY 524
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIE 358
I+GL +++ EAK L + + A I S S + + A +F M+
Sbjct: 525 NCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLS 584
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
G VP + L K C + E + +K + D+ +Y+ ++ L +G+ +E
Sbjct: 585 SGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKE 644
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A GV + + G+ PDV YNSL+ C+E + A +L+D+M +G + N+ YN LI+
Sbjct: 645 AMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLIN 704
Query: 479 KFS--EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+ + G + A +LF M+ KG++PD Y L++G +E NL+ A +F+++ V
Sbjct: 705 DYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV 764
Query: 537 MLARSILSTFMISLCRR 553
+ S ++ + S C+
Sbjct: 765 G-SLSAFNSLIDSFCKH 780
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 117/493 (23%), Positives = 215/493 (43%), Gaps = 20/493 (4%)
Query: 68 LGFFNWASQ------QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV 121
LGF N AS F + + +++++ L + + V + KI D
Sbjct: 185 LGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYT 244
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDE 179
Y +I + + + K V +E++ C+ P + N+ + L G +D AL++
Sbjct: 245 YTNVIKAHCKVGDVIKGKMVLSEMEKECK---PNLFTYNAFIGGLCQTGAVDEALEVKKL 301
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGFCK 238
M +G+ + + + FC+ + + + + + +S +N + +I GF K
Sbjct: 302 MMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESM---PSSGLNPNRFTYTALIDGFIK 358
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+EEA ++ DE+ R K + + Y + G + + + + G+ P T
Sbjct: 359 EGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWT 418
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMI 357
Y I G + + +A EL + + K T + LI G S D + A + MI
Sbjct: 419 YNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMI 478
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
G P + L K + ++ + +E+ K++ AN D+ YN ++ LC + ++
Sbjct: 479 RNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVE 538
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
EA ++ +M KG+ P+ Y + + + ++ A++ + M +SG N Y ILI
Sbjct: 539 EAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILI 598
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK----SVN 533
+VG AL F MLEKG+ PD Y++++ L + + A VF K V
Sbjct: 599 KGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVV 658
Query: 534 HDVMLARSILSTF 546
DV L S++S F
Sbjct: 659 PDVFLYNSLISGF 671
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 108/504 (21%), Positives = 208/504 (41%), Gaps = 10/504 (1%)
Query: 55 VINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNK 114
+I+ YL +H + T SP +Y ++ L S + + VL Q+ N
Sbjct: 422 LIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNG 481
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI-C-NSLLAVLASDGYIDN 172
+ + +Y +I + +Q + A + + N + P++ C N L+ L ++
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIAN--GVLPDLFCYNCLIIGLCRAKKVEE 539
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A + +M +G++ + +G FI + ++ ++ ++ + ++ +VI ++
Sbjct: 540 AKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDML--SSGIVPNNVIYTIL 597
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I G C EA + + PD AY + G E V K K GV
Sbjct: 598 IKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGV 657
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---GSVSSIDPRSA 349
P Y I G E I +A +L + ++ + V N LI G S + A
Sbjct: 658 VPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEA 717
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F+ MI KG P L K ++ + ++ + + ++N ++
Sbjct: 718 FKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHE-AQQKSVGSLSAFNSLIDS 776
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
C G++ EA + +M K L P++ Y L++A + +++ A++L+ M N
Sbjct: 777 FCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPN 836
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
TY L+ ++++G + LF +M +G+A DA Y + C+E A ++ N
Sbjct: 837 TLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLN 896
Query: 530 KSVNHDVMLARSILSTFMISLCRR 553
KS+ + L + + LC+
Sbjct: 897 KSLVEGIKLEDDVFDALIFHLCKE 920
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 131/550 (23%), Positives = 220/550 (40%), Gaps = 86/550 (15%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWASQQ---PNFTHSPLSYHSILK-SLSLSRQINA 102
L+P +V V+ + FF+W+S + P + HS +SIL L S I+
Sbjct: 83 LNPEIVCSVLQKSEIDDSVRLQNFFHWSSSKMSTPQYLHS----YSILAIRLCNSGLIHQ 138
Query: 103 IDSVL-KQVKVNKITLDSSVYRFIIPSLIQ-----GKNTQKAFSVF----------NE-- 144
D++L K ++ K L+ I+ SL++ G + F +F NE
Sbjct: 139 ADNMLEKLLQTRKPPLE------ILDSLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEAS 192
Query: 145 ---VKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+ E P + CN+L+ L + K++ M + + I
Sbjct: 193 SVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAH 252
Query: 200 CENAKLGQVLS---MLDEVRK--RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
C K+G V+ +L E+ K + N + I G C+ V+EA +V +
Sbjct: 253 C---KVGDVIKGKMVLSEMEKECKPNLFTYNAFIG-----GLCQTGAVDEALEVKKLMME 304
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
+ PD Y ++ + F E +++ + G+ P Y I G I E I E
Sbjct: 305 KGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEE 364
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSK 373
A + + +++ ++ NA+IG ++ + A+ FN M+ G P T + L
Sbjct: 365 ALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLID 424
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
K + + E+ + A +Y+V++S LC S L++A V+ +M R G+ P
Sbjct: 425 GYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKP 484
Query: 434 DVSFYNSLMEA-----------------------------------CCREDLLRPAKKLW 458
+V Y +L++A CR + AK L
Sbjct: 485 NVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLL 544
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
M G N TY I+ +S+ GEI+ A R F +ML G+ P+ YT L++G C
Sbjct: 545 VDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDV 604
Query: 519 TNLQAAFEVF 528
N A F
Sbjct: 605 GNTVEALSTF 614
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 135/330 (40%), Gaps = 10/330 (3%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALK 175
D Y II SL + T++A VF +KF + P++ NSL++ +G I+ A +
Sbjct: 625 DIRAYSAIIHSLSKNGKTKEAMGVF--LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQ 682
Query: 176 MFDEMSHRGVEFSTIGFGVFI--WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLII 233
++DEM H G+ + + + I + +C++ L + + DE+ + S I ++I
Sbjct: 683 LYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGIS--PDGYIYCILI 740
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
G K +E+A + E + + A+ + + F G V E + +
Sbjct: 741 DGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLT 799
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR-SAIVF 352
P Y I + EA++L + + + +L+ S + I R I
Sbjct: 800 PNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISL 859
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F M +G ++ CK KS E +++ + + ++ ++ LC
Sbjct: 860 FKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCK 919
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
++ ++ EM ++ L N+L+
Sbjct: 920 EKQISTVLELLSEMGKEELSLSSKTCNTLL 949
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 178/361 (49%), Gaps = 7/361 (1%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L+ L+ +G I AL + EM V+ + + + I C++ + L + ++ +R
Sbjct: 165 TLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGER 224
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
++ +V +I G C R +E ++L ++ PD + I+ + G +
Sbjct: 225 --GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
E + VL K G P Y + G + EA+EL +V K ++ DVLN +
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV--KRGLEPDVLNYNV 340
Query: 339 ---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
G + A+V F + K VPT+++ ++L LC + + ++ + +
Sbjct: 341 LIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSA 400
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D+ +YN+++ LC GR+ EA GV+ M +KG+ P++ YN++M+ C + + AK
Sbjct: 401 QPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAK 460
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
++++M SG ++ YN+LI+ + + ++ A+ LF M K + PD +Y SL++GL
Sbjct: 461 DIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGL 520
Query: 516 C 516
C
Sbjct: 521 C 521
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 123/550 (22%), Positives = 235/550 (42%), Gaps = 51/550 (9%)
Query: 46 SLSPSLVAR--VINPYLLTHHSLALGFFNWAS-----QQPNFTHSPLSYHSILKSLSLSR 98
+SPS+ +IN Y H+ A F A+ QPN +++++I+ ++
Sbjct: 85 GISPSIATFTILINCYFHQSHT-AFAFSLLATILKSGYQPNL----VTFNTIINGFCING 139
Query: 99 QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN 158
I + + D Y +I L + + A + E++ + + +
Sbjct: 140 MIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYS 199
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L+ L DG++ +AL + ++ RG+ + + I C + +V +L ++ R
Sbjct: 200 ALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM-VR 258
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
EN + +LI CK R+ EA VL + R KPD + Y + E + +V
Sbjct: 259 ENVDPDDYTFNILI-DALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVH 317
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA---------KELGEVIVSGKFTI 329
E + + K G+ P +Y I G + + EA K L I S I
Sbjct: 318 EARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLI 377
Query: 330 DD-----------DVLNALIGSVSSIDPRSAIVFFNFMIEKGRV---------------- 362
D +L+ + GS D + + + + ++GR+
Sbjct: 378 DGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVK 437
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + T + + C RN + +++ + + D+ +YNV+++ C + + EA +
Sbjct: 438 PNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVL 497
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+EM+ K L PD++ YNSL++ C + ++L D+M SG S ++ TYNIL+ F +
Sbjct: 498 FKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCK 557
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
+ A+ LF ++E G+ PD T ++++ LC+ L+ A + + H
Sbjct: 558 TQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQT 616
Query: 543 LSTFMISLCR 552
+ + +LC+
Sbjct: 617 YTILINALCK 626
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 182/435 (41%), Gaps = 36/435 (8%)
Query: 133 KNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
+N A + FN + + + LL + G+ A+ +F ++ +G+ S F
Sbjct: 34 RNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATF 93
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRE--------NSMINGSVIAVLI------------ 232
+ I + + S+L + K N++ING I +I
Sbjct: 94 TILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153
Query: 233 -------------IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
I+G K +++ A +L E+ +P+ + Y + + G V +
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+ + + G+ Y I G R E +L +V DD N LI
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273
Query: 340 SVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
++ + R A M ++G P + T + L + C R E E++ +
Sbjct: 274 ALCK-EGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLE 332
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D+ +YNV++ C + + EA + +E+ K L P ++ YNSL++ C + KKL
Sbjct: 333 PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKL 392
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
D+M S ++ TYNILI + G I AL + M++KGV P+ TY ++++G C
Sbjct: 393 LDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCL 452
Query: 518 ETNLQAAFEVFNKSV 532
N+ A ++FN+ V
Sbjct: 453 RNNVNVAKDIFNRMV 467
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 192/448 (42%), Gaps = 3/448 (0%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
S+ Q++ I+ + + +I +T AFS+ + + N+++
Sbjct: 76 SLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGF 135
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
+G I AL + +G F +G I +N ++ L +L E+ K +S+
Sbjct: 136 CINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEK--SSVQP 193
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
V+ +I G CK V +A + ++ R D + Y + + +G E +L
Sbjct: 194 NLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLL 253
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSS 343
K + V P + I L E RI EA+ + ++ D NAL+ G S
Sbjct: 254 TKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSR 313
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ A FN M+++G P + + L CK DE + ++K L + + SY
Sbjct: 314 ENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASY 373
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N ++ LC SGR+ ++ EM PDV YN L++A C+E + A + M
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G N+ TYN ++ + + A +F+ M++ G+ PD Y L+ G C+ +
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDE 493
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLC 551
A +F + + +++ + ++ + LC
Sbjct: 494 AIVLFKEMRHKNLIPDIASYNSLIDGLC 521
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 193/448 (43%), Gaps = 18/448 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+S++ + + +L ++ + D + +I +L + +A V
Sbjct: 231 VTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAM 290
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ E N+L+ S + A ++F+ M RG+E + + V I +C+
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKT-- 348
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVL-----IIHGFCKGKRVEEAFKVLDELRIRECKP 259
M+DE + N +++ + +I G C R+ K+LDE+ P
Sbjct: 349 -----KMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPP 403
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D + Y I+ + G + E VL K GV P Y + G + + AK++
Sbjct: 404 DVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIF 463
Query: 320 EVIVSGKFTIDDDVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+V K ++ D+LN + G + AIV F M K +P +++ ++L LC
Sbjct: 464 NRMV--KSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLC 521
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+ + E+ + + D+ +YN+++ C + +A + +++ +G+ PD
Sbjct: 522 NLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFY 580
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
+++++ C+ + L+ A+ + GCS N++TY ILI+ + G A+ L M
Sbjct: 581 TNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKM 640
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAA 524
+ PDA T+ ++ L Q A
Sbjct: 641 EDNDRPPDAITFEIIIGVLLQRNETDKA 668
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 162/385 (42%), Gaps = 10/385 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+++++ ++ + ++ + D Y +I + K +A +F E
Sbjct: 301 VTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKE 360
Query: 145 VKFNC-EDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ C +++ P I NSL+ L + G I + K+ DEM + + + I C+
Sbjct: 361 L---CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCK 417
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
++ + L +L + K+ + V ++ G+C V A + + + +PD
Sbjct: 418 EGRILEALGVLVMMMKK--GVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDI 475
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ Y ++ + V E V+ K+ R + P Y I GL RI +EL +
Sbjct: 476 LNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDE 535
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ + D N L+ + P AI F ++E G P T + NLCK K
Sbjct: 536 MCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEK 594
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+ K L + ++++Y ++++ LC G EA ++ +M+ PD +
Sbjct: 595 LKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEI 654
Query: 441 LMEACCREDLLRPAKKLWDQMFASG 465
++ + + A+KL ++M A G
Sbjct: 655 IIGVLLQRNETDKAEKLREEMIARG 679
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%)
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G A + +++ KG+ P ++ + L+ + A L + SG NL T+
Sbjct: 69 GHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTF 128
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
N +I+ F G I AL N+L +G D TY +L+ GL + ++AA + +
Sbjct: 129 NTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEK 188
Query: 534 HDVMLARSILSTFMISLCR 552
V + S + LC+
Sbjct: 189 SSVQPNLVMYSALIDGLCK 207
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 46/106 (43%)
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C + +A M R P S ++ L+ A R A L+ Q+ + G S ++
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
T+ ILI+ + A L +L+ G P+ T+ +++ G C
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFC 136
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 203/452 (44%), Gaps = 42/452 (9%)
Query: 83 SPLSYHSILKSLSLSRQI--NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
SP++Y+ ++ + S R + A D + K ++ + D Y ++ L + ++A
Sbjct: 79 SPVTYNVMIDA-SCKRGMLEEACDLIKKMIEDGHVP-DVVTYNTVMDGLCKSSRVEEALL 136
Query: 141 VFNEV-KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+FNE+ + C N+++ L ID A ++F EM + + + +G+ I
Sbjct: 137 LFNEMERLGCTP-NRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGL 195
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ KL + + R ++ + +V ++IHG C ++EA ++ +R + C+P
Sbjct: 196 AKAGKLNEAYKLFQ--RMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRP 253
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
+ I+ + G + E +LK+ G P Y I GL R+ +A+ L
Sbjct: 254 SRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL- 312
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
++D M+++ PT+ T + L LCK
Sbjct: 313 ---------LED------------------------MVKRQCKPTVVTQNTLIHGLCKAG 339
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ E EV + ++ D+ +YN +V C +G+ A ++ +M +GL P+V Y
Sbjct: 340 RIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYT 399
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+L+ C+ + L A ++ QM +SGC+ NL TY LI F G+++G L+LF M+
Sbjct: 400 ALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCA 459
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
G++PD Y +L LC+ A E+ +
Sbjct: 460 GISPDHVVYGTLAAELCKSGRSARALEILREG 491
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 195/417 (46%), Gaps = 3/417 (0%)
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNAL 174
++ DS Y +I L + A ++F ++ + SL+ L D+A
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIH 234
++F +M+ RG S + + V I C+ L + ++ ++ E+ + V ++
Sbjct: 66 ELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI--EDGHVPDVVTYNTVMD 123
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
G CK RVEEA + +E+ C P+ ++ + + + V + + P
Sbjct: 124 GLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPP 183
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFF 353
+ Y I GL ++ EA +L + ++ T N +I G + A+ F
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF 243
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
M KG P+ T + L CKR K DE + K ++ + + D+ +Y+ ++S LC+
Sbjct: 244 KSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSI 303
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
R+ +A ++++M ++ P V N+L+ C+ ++ A+++ D M +SG S ++ TY
Sbjct: 304 ARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 363
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
N L+ G+ E A L +M+ +G+AP+ TYT+L+ GLC+ L A VF +
Sbjct: 364 NTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/485 (21%), Positives = 204/485 (42%), Gaps = 23/485 (4%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N + SY ++ L+ + ++N ++ +++ + +T + Y +I L + A
Sbjct: 5 NVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 64
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+F ++ P N ++ G ++ A + +M G + + +
Sbjct: 65 RELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124
Query: 199 FCENAKLGQVLSMLDEV--------RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD 250
C+++++ + L + +E+ R+ N+ II G C+ ++++A +V
Sbjct: 125 LCKSSRVEEALLLFNEMERLGCTPNRRSHNT----------IILGLCQQSKIDQACQVFH 174
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
E+ ++ PD +Y I+ + G + E + ++ G+ P Y I G+ +
Sbjct: 175 EMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAY 234
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLST 367
+ EA EL + + S N LI + +D A M + G VP + T
Sbjct: 235 TLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLD--EAFRLLKRMTDDGHVPDVVT 292
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
S L LC + D+ + + + + + N ++ LC +GR++EA V+ M
Sbjct: 293 YSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMV 352
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
G PDV YN+L+ CR A++L M A G + N+ TY L+S + +
Sbjct: 353 SSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLP 412
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
A +F M G AP+ TYT+L+ G C + ++F + V + + T
Sbjct: 413 EACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLA 472
Query: 548 ISLCR 552
LC+
Sbjct: 473 AELCK 477
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 137/334 (41%), Gaps = 36/334 (10%)
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI------- 307
R PD +Y I+ + G + + + +K GV P T Y I GL
Sbjct: 4 RNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDD 63
Query: 308 -------VERRIC---------------------EAKELGEVIVSGKFTIDDDVLNALI- 338
+ RR C EA +L + ++ D N ++
Sbjct: 64 ARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 123
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G S A++ FN M G P + + + LC+++K D+ +V+ + A D
Sbjct: 124 GLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPP 183
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D SY +++ L +G+L EAY + Q M G+ P YN ++ C L A +L+
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF 243
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
M + GC + T+NILI + G+++ A RL M + G PD TY++L+ GLC
Sbjct: 244 KSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSI 303
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ A + V +T + LC+
Sbjct: 304 ARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCK 337
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 86/181 (47%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M E+ P + L L K K ++ +++ L + +Y ++ LC +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+A + +M R+G P YN +++A C+ +L A L +M G ++ TYN
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
++ + +E AL LF+ M G P+ ++ +++ GLCQ++ + A +VF++ D
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 536 V 536
+
Sbjct: 181 I 181
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 141/379 (37%), Gaps = 40/379 (10%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY ++ L+ + ++N + +++ + IT + Y +I + +A +F +
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ N L+ G +D A ++ M+ G + + I C A++
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 306
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+L+++ KR+ V +IHG CK R++EA +VLD + PD + Y
Sbjct: 307 DDARHLLEDMVKRQCKPT--VVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYN 364
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ G +L G+AP Y + GL R+ EA + + S
Sbjct: 365 TLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 424
Query: 326 KFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS--- 381
+ ALI G S+ + F M+ G P L+ LCK +S
Sbjct: 425 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA 484
Query: 382 -------------------------DELVEVYKVLSANDYFTDM---------ESYNVMV 407
D L+E K+ A + DM E +V
Sbjct: 485 LEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLV 544
Query: 408 SFLCTSGRLREAYGVIQEM 426
+ LC SG+ EA V++E+
Sbjct: 545 AGLCKSGQGGEARAVLEEI 563
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/219 (17%), Positives = 87/219 (39%), Gaps = 23/219 (10%)
Query: 51 LVARVINPYLLTHHSLALGFFNW---------------ASQQPNFTHSPLSYHSILKSLS 95
+V R P ++T ++L G + Q P+ ++Y++++
Sbjct: 316 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV----VTYNTLVHGHC 371
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
+ Q +L + + + Y ++ L + +A VF ++K + P
Sbjct: 372 RAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS--GCAPN 429
Query: 156 I--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
+ +L+ S G +D LK+F EM G+ + +G + C++ + + L +L
Sbjct: 430 LFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR 489
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
E R+ S G + + G + ++E A + ++
Sbjct: 490 EGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDM 528
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 119/505 (23%), Positives = 218/505 (43%), Gaps = 34/505 (6%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINA 102
R L+P LV +++ L L + FF WA +Q + H+P Y ++L
Sbjct: 132 FRQKLNPDLVVEILS--FLKSPELCVKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDRV 189
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE----ICN 158
+ L++++ + D V ++ LI+ ++V E +D G + N
Sbjct: 190 PEEFLREIRGD----DKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYN 245
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L+ V +D A + EMS G+ G F C+ K + LS++++
Sbjct: 246 ALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEK---- 301
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+ +++ +I G C+ EEA L+ +R C P+ YRI L+
Sbjct: 302 -EDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRI------LLCGCL 354
Query: 279 EREVVLKKKRKL------GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
++ + + KR L G P + + A +L + + +
Sbjct: 355 NKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYV 414
Query: 333 VLNALIGSVSSIDPRSAIVFF-------NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
V N LIGS+ S V F N M+ G V + + ++ LC K ++
Sbjct: 415 VYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAY 474
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
+V + N + D +Y+ ++ FLC + R+ A+ + +EMK G+ PDV Y L++
Sbjct: 475 KVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCF 534
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
+ +++ A D+M GC + TY LI + + ++ A LF M+ KG P+
Sbjct: 535 SKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNV 594
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNK 530
TYT+L++G C+ N++ A +++ +
Sbjct: 595 ITYTALIDGYCKSGNIEKACQIYAR 619
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 178/416 (42%), Gaps = 26/416 (6%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS--LLAV 163
V+ ++ N D+S Y +I L + AF +F E+K + P++ L+
Sbjct: 476 VIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGT--GVVPDVYTYTILIDC 533
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
+ G I A DEM G E + + + I + + K+ V + L E+ +
Sbjct: 534 FSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKV-SVANELFELMIAKGCFP 592
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
N + +I G+CK +E+A ++ +R PD Y FK+ +V E+
Sbjct: 593 N-VITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMY------FKIKNNVAEK--- 642
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVS 342
P Y + GL ++ +A++L E + + V +ALI G
Sbjct: 643 ----------PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCK 692
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
+ A F+ M+E G P + T S+L L K + D +++V + N ++
Sbjct: 693 AAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVI 752
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y M+ L + EAY ++ M+ KG P+V Y ++++ + + +L+ +M
Sbjct: 753 YTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMG 812
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ GC+ N TY +LI+ G ++ A L M + ++Y ++EG +E
Sbjct: 813 SKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKRE 868
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/494 (20%), Positives = 209/494 (42%), Gaps = 25/494 (5%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F +Y ++ L + ++ + K++K + D Y +I + ++A
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQA 543
Query: 139 FSVFNE-VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
+ +E V+ CE P + +L+ + A ++F+ M +G + I +
Sbjct: 544 HNWLDEMVRDGCE---PTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTAL 600
Query: 196 IWKFCENAKLGQVLSMLDEVR------------KRENSMINGSVIAVL--IIHGFCKGKR 241
I +C++ + + + +R K +N++ + ++ G CK +
Sbjct: 601 IDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHK 660
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
V++A +L+ + + C+P+ I Y + + F + E + V K + G P Y
Sbjct: 661 VKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSS 720
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKG 360
I L ++R+ ++ ++ + + +I +S + A M EKG
Sbjct: 721 LIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKG 780
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P + T + + K K D+ +E+++ + + + +Y V+++ C +G L EAY
Sbjct: 781 CKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAY 840
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+++EMK+ VS Y ++E RE +L + L +++ +G + + Y +LI F
Sbjct: 841 ALLEEMKQTYWPKHVSSYCKVIEGYKREFIL--SLGLLEEVEKNGSAPIILLYKVLIDNF 898
Query: 481 SEVGEIEGALRLFHNMLEKGV--APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+ G +E AL L ++ + A YTSL+ + + AFE+F + V+
Sbjct: 899 VKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIP 958
Query: 539 ARSILSTFMISLCR 552
++ L R
Sbjct: 959 DLGTFVHLLMGLIR 972
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 81/192 (42%), Gaps = 3/192 (1%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G PT T + L + + +K D V++ +S D + LC G+ REA
Sbjct: 236 GYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREA 295
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+I+ ++ P+ YN ++ C A ++M ++ C N++TY IL+
Sbjct: 296 LSLIE---KEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCG 352
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
++ R+ M+ +G P T + SL+ C+ + A+++ K +
Sbjct: 353 CLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPG 412
Query: 540 RSILSTFMISLC 551
+ + + S+C
Sbjct: 413 YVVYNILIGSIC 424
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 197/427 (46%), Gaps = 10/427 (2%)
Query: 119 SSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLL-AVLASDGYIDNALKMF 177
S+V+ ++ S +KA ++ + K N G N++L +++ + A K++
Sbjct: 132 SAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVY 191
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFC 237
EM GV + + + I FC L L +E+ + N + V +I +C
Sbjct: 192 REMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMER--NRCLPNVVTYNTVIGAYC 249
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K KR++EAFK+L + + +P+ + Y +V +G + E VL + + G AP
Sbjct: 250 KLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGV 309
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFM 356
Y + G +A L ++ D +LI ++ + A+ FF+ M
Sbjct: 310 TYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQM 369
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
+G P T ++L ++ DE ++ + + + + +YN +++ C SGR+
Sbjct: 370 HVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRM 429
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
EA G+++ M+ KGL PDV Y++++ CR L A ++ +M G S + TY+ L
Sbjct: 430 EEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSL 489
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I E + A LF ML K + PD TYTSL+ G C+E +L A + HD
Sbjct: 490 IQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNL------HDE 543
Query: 537 MLARSIL 543
M+ + L
Sbjct: 544 MIKKGFL 550
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 106/490 (21%), Positives = 193/490 (39%), Gaps = 19/490 (3%)
Query: 80 FTHSPLSYHSILKSLSLSRQ-INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F LSY++IL S+ R+ + + V +++ + ++L+ Y +I N +
Sbjct: 163 FMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMG 222
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
F E++ N N+++ ID A K+ M G+E + + + + I
Sbjct: 223 LRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVING 282
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C ++ + +L E+ ++ V +++G+CK +A + E+
Sbjct: 283 LCRVGRIEETSGVLAEMDRK--GFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLP 340
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD + Y + G++ + G+ P Y I G + + EA +
Sbjct: 341 PDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRI 400
Query: 319 GEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ ++ F NAL+ G S AI M KG P + + S + C+
Sbjct: 401 WDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCR 460
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ D ++ + D +Y+ ++ LC RL EA + QEM K L PD
Sbjct: 461 YQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFT 520
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
Y SL+ C+E L A L D+M G + TYN+LI+ ++ A RL +
Sbjct: 521 YTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLF 580
Query: 498 EKGVAPDATTYTSLLE---------------GLCQETNLQAAFEVFNKSVNHDVMLARSI 542
P+ TY +L+E G C + + A +VF + + ++
Sbjct: 581 YDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAV 640
Query: 543 LSTFMISLCR 552
+ + CR
Sbjct: 641 YNVIIHGHCR 650
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 133/323 (41%), Gaps = 34/323 (10%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I GFC +E + +E+ C P+ + Y V + + + E +L+
Sbjct: 208 ILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLE 267
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
G+ P Y I GL RI E G ++ +D
Sbjct: 268 GLEPNLLTYNMVINGLCRVGRIEETS----------------------GVLAEMD----- 300
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
KG P T + L CK + + ++ + N D+ +Y +++ +
Sbjct: 301 -------RKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTM 353
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C +G L A +M +GL P+ Y SL+ ++ + A ++WD+M SG +
Sbjct: 354 CKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTI 413
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TYN L++ G +E A+ L M KG++PD +Y++++ G C+ L AF++ +
Sbjct: 414 VTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAE 473
Query: 531 SVNHDVMLARSILSTFMISLCRR 553
V V S+ + LC +
Sbjct: 474 MVEKGVSPDAITYSSLIQGLCEQ 496
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 208/476 (43%), Gaps = 34/476 (7%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PN L+Y+ ++ L +I VL ++ D Y ++ + N
Sbjct: 270 EPNL----LTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFH 325
Query: 137 KAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+A + +E+ N + P++ SL+ + G ++ A++ FD+M RG+ + + +
Sbjct: 326 QALVLHSEMLRN--GLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTS 383
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELR 253
I F + + + + DE+ + S +++ +++G C R+EEA +L +
Sbjct: 384 LINGFSQKGFMDEAYRIWDEMIR---SGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGME 440
Query: 254 IRECKPDFIAYRIVAEEF---KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
+ PD ++Y + F + + F+ + +K GV+P Y I GL +R
Sbjct: 441 GKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEK---GVSPDAITYSSLIQGLCEQR 497
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
R+ EA +L + +++ D+ +LI G D A+ + MI+KG +P T +
Sbjct: 498 RLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYN 557
Query: 370 NLSKNLCKRNKSDE----LVEVY---KVLSANDYFTDMESYN--------VMVSFLCTSG 414
L L K+ ++ E L++++ + + Y T +ES + ++ C G
Sbjct: 558 VLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKG 617
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ EA V + M ++ P+ + YN ++ CR+ + A KL+ +M G + T
Sbjct: 618 LMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTII 677
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
L+ G E + ++L DA +L++ +E N+ A F + +
Sbjct: 678 ALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTE 733
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 211/463 (45%), Gaps = 5/463 (1%)
Query: 70 FFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSL 129
FN + N + + IL SL ++Q S+ +Q++ N I D ++
Sbjct: 44 LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103
Query: 130 IQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
Q + + +FSVF ++ L+ L G + AL D++ +G +
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163
Query: 190 IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKV 248
+ +G I C ++G+ + + +R+ + ++ +V+ II CK K V +AF +
Sbjct: 164 VSYGTLINGLC---RVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDL 220
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
E+ + PD + Y + F ++G + + + + P + I G
Sbjct: 221 YCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCK 280
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLST 367
E ++ EAK + V++ +D N+L+ + A FN M ++G P + +
Sbjct: 281 EGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWS 340
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
S + CK DE +++++ + F ++ +YN +V LC SGR A ++ EM
Sbjct: 341 YSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMH 400
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
+G ++ YNS+++A C+ + + A L ++ G ++ TY +LI+ +VG ++
Sbjct: 401 DRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLD 460
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
A ++F ++L KG +P+ TYTSL+ G C + + +K
Sbjct: 461 DAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSK 503
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 148/340 (43%), Gaps = 38/340 (11%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I+ K K+ + A + ++ KPDFI ++ F +G + V K K G
Sbjct: 64 ILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKG 123
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
P + I GL ++ + +A + +V+ F +D LI + + A V
Sbjct: 124 YHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAV 183
Query: 352 ------------------------------------FFNFMIEKGRVPTLSTLSNLSKNL 375
+ M+ K P + T S+L
Sbjct: 184 QLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGF 243
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C K V+++ + +++ ++ ++++++ C G++REA V+ M +K + DV
Sbjct: 244 CVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDV 303
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YNSLM+ C + AK L++ M G + ++ +Y+I+I+ F ++ ++ A++LF
Sbjct: 304 VTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEE 363
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
M K + P+ TY SL++GLC+ A E+ ++ HD
Sbjct: 364 MHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEM--HD 401
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 108/198 (54%), Gaps = 4/198 (2%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F +++KG P T + L K LC + + + + + + A + D SY +++ LC
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G + A +++ + K + P+V Y++++++ C++ L+ A L+ +M + S ++ T
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF---- 528
Y+ LIS F VG+++ A+ LF+ M+ + P+ T++ L++G C+E ++ A V
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295
Query: 529 NKSVNHDVMLARSILSTF 546
K+V DV+ S++ +
Sbjct: 296 KKNVKLDVVTYNSLMDGY 313
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 98/202 (48%), Gaps = 5/202 (2%)
Query: 352 FFNFMIEKGR-VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
FN ++ K +P + +L K + + + + + N D + N++++
Sbjct: 44 LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
G ++ ++ V ++ +KG PD + L++ C + + A D++ A G +
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF-- 528
+Y LI+ VGE + A++L + K V P+ Y+++++ +C++ + AF+++
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCE 223
Query: 529 --NKSVNHDVMLARSILSTFMI 548
+K ++ DV+ S++S F +
Sbjct: 224 MVSKRISPDVVTYSSLISGFCV 245
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
K + P + F ++ + + + A L QM +G + T N+L++ FS++G I
Sbjct: 51 KNNPIPPAIEF-GKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHI 109
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
+ + +F +L+KG PDA T+T L++GLC + + A +K V L + T
Sbjct: 110 KFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTL 169
Query: 547 MISLCR 552
+ LCR
Sbjct: 170 INGLCR 175
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 173/385 (44%), Gaps = 36/385 (9%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G + LK+ EM +G++ + + I C++ K+ +L E+ + ++ +V
Sbjct: 24 GELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQ--GIVPDTV 81
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+ +I GFCK ++ A+K+ DE+ + PDFIAY V G + E + V K
Sbjct: 82 VYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKM 141
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR 347
GV P Y I G C++ E+
Sbjct: 142 FSRGVEPDEVTYTTLIDGY------CKSGEM----------------------------E 167
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A N M++ G P + T + L+ LCK + D E+ + ++ +YN +V
Sbjct: 168 KAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLV 227
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+ LC SG +R+A +++EM+ G+ PD + +LM+A C+ + A +L +M G
Sbjct: 228 NGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQ 287
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
+ T+N+L++ F G +E RL MLEKG+ P+ TTY SL++ C N++ E+
Sbjct: 288 PTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEI 347
Query: 528 FNKSVNHDVMLARSILSTFMISLCR 552
+ VM + + + C+
Sbjct: 348 YKGMCARGVMPDSNTYNILIKGHCK 372
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 177/396 (44%), Gaps = 7/396 (1%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALK 175
D Y +I G QK + E++ + + P + NS++ +L G +D+A +
Sbjct: 9 DVVSYSTVINGYCLGGELQKVLKLIQEMQM--KGLKPNLYTYNSIILLLCKSGKVDDAER 66
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ EM ++G+ T+ + I FC+ + + DE+ K+ ++ + +I G
Sbjct: 67 VLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQR--IVPDFIAYTAVICG 124
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
C+ ++ EA KV +++ R +PD + Y + + + G + + + + + G+ P
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFN 354
Y GL ++ A EL + ++ N+L+ G S + R A+
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLME 244
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M G P T + L CK + + E+ + + + ++NV+++ C SG
Sbjct: 245 EMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSG 304
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
L + ++ M KG+ P+ + YNSLM+ C + +R +++ M A G + TYN
Sbjct: 305 MLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYN 364
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
ILI + ++ A L M EKG A++Y S
Sbjct: 365 ILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNS 400
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 210/456 (46%), Gaps = 9/456 (1%)
Query: 48 SPSLVA--RVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDS 105
+P +V+ VIN Y L + Q + +Y+SI+ L S +++ +
Sbjct: 7 APDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAER 66
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAV 163
VL+++ I D+ VY +I + N Q A+ +F+E++ + I P+ +++
Sbjct: 67 VLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEK--QRIVPDFIAYTAVICG 124
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L G + A K+F++M RGVE + + I +C++ ++ + S+ +++ ++ +
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMV--QSGLT 182
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
V + G CK +V+ A ++L E+ + + + Y + G++ + +
Sbjct: 183 PNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKL 242
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVS 342
+++ G+ P T + + + +A EL ++ N L+ G
Sbjct: 243 MEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCM 302
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
S +M+EKG +P +T ++L K C RN E+YK + A D +
Sbjct: 303 SGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNT 362
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN+++ C + ++EA+ + +EM KG + S YNS+++ ++ + A++L+++M
Sbjct: 363 YNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMR 422
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
G + + + YN+ + G +E AL L +E
Sbjct: 423 REGMAADAEIYNLFVDISYGEGNMETALELCDEAIE 458
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 143/323 (44%), Gaps = 1/323 (0%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I+G+C G +++ K++ E++++ KP+ Y + G V + E VL++ G
Sbjct: 16 VINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQG 75
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAI 350
+ P T Y I G I A +L + + + D A+I G A
Sbjct: 76 IVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEAD 135
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
FN M +G P T + L CK + ++ ++ + + ++ +Y + L
Sbjct: 136 KVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGL 195
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C G++ A ++ EM KGL ++ YNSL+ C+ +R A KL ++M +G +
Sbjct: 196 CKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDT 255
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
T+ L+ + + GE+ A L ML++G+ P T+ L+ G C L+ +
Sbjct: 256 ITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAW 315
Query: 531 SVNHDVMLARSILSTFMISLCRR 553
+ +M + ++ M C R
Sbjct: 316 MLEKGIMPNTTTYNSLMKQYCIR 338
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 83/154 (53%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D+ SY+ +++ C G L++ +IQEM+ KGL P++ YNS++ C+ + A+++
Sbjct: 9 DVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVL 68
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M G + Y LI F ++G I+ A +LF M ++ + PD YT+++ GLC+
Sbjct: 69 REMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRC 128
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ A +VFNK + V +T + C+
Sbjct: 129 GKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCK 162
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 69/127 (54%)
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
MK +G PDV Y++++ C L+ KL +M G NL TYN +I + G+
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
++ A R+ M+ +G+ PD YT+L++G C+ N+QAA+++F++ ++ +
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 546 FMISLCR 552
+ LCR
Sbjct: 121 VICGLCR 127
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 208/476 (43%), Gaps = 11/476 (2%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
T ++++SI+ L + + S+L + Y +I L + +N +A +
Sbjct: 42 TPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKT 101
Query: 141 VFNEVKFNCEDIGPEICN-SLLA-VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ +E F P++ S+LA L G ID A ++ EMS G + + + I
Sbjct: 102 LVDE--FVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDG 159
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C+ +K + +L+ + + + V +I+ G CK R+++A K+++ + R C
Sbjct: 160 LCKASKTEKAYELLETLVS--SGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCT 217
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
P I Y + E G V E + K+ Y + G R EA+++
Sbjct: 218 PSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKV 277
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ I + DV NAL+ I F M +G VP + T + + LCK
Sbjct: 278 VDGIRGTPYI---DVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCK 334
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
K DE + + + D+ SYN+++ L + + +EA V+ +M + G+ PD
Sbjct: 335 HGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVT 394
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
YN+LM C+E+ A + M +G + TYN LIS S+ + A L H ML
Sbjct: 395 YNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEML 454
Query: 498 EKG-VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
G V TTY ++++ LC+E L+ A + + H V + F+ LC+
Sbjct: 455 RNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCK 510
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 221/472 (46%), Gaps = 13/472 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+ ++ L + + + +L ++ +T D+ + I+ L + ++A S+ +
Sbjct: 12 TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVM 71
Query: 146 -KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ NC P C N+L++ L +D A + DE G + + + C+
Sbjct: 72 AERNCR---PSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKR 128
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
++ + ++ E+ N V +I G CK + E+A+++L+ L PD +
Sbjct: 129 GRIDEAFELVKEMSG--NGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVV 186
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y I+ + G + + +++ K G P Y + GL R+ EA + + +
Sbjct: 187 TYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 246
Query: 323 VSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
VS T D +L+ G S + A + + +G P + + L CK +
Sbjct: 247 VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RG-TPYIDVYNALMDGYCKEGRL 303
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
DE+ V++ ++ ++++YN+++ LC G++ EA+ ++ M G PDV YN +
Sbjct: 304 DEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNII 363
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
++ + + A+++ DQM +G + TYN L+++F + + A+ + NM++ GV
Sbjct: 364 IDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGV 423
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSV-NHDVMLARSILSTFMISLCR 552
PD TY +L+ GL Q L A+E+ ++ + N V+ A + +T + LC+
Sbjct: 424 DPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCK 475
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 206/460 (44%), Gaps = 15/460 (3%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
T S ++Y ++++ L + +++ + K++ T D+ Y ++ + T++A
Sbjct: 217 TPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQK 276
Query: 141 VFNEVKFNCEDIGP--EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
V + ++ P ++ N+L+ +G +D +F++M+ RG + + + +
Sbjct: 277 VVDGIRGT-----PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDG 331
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C++ K+ + L+ + + V +II G K + +EA +VLD++
Sbjct: 332 LCKHGKVDEAFPFLESMHSA--GCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIP 389
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD + Y + +F + +LK K GV P Y I GL R+ +A EL
Sbjct: 390 PDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYEL 449
Query: 319 -GEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
E++ +G N +I + + A++ + M G T + LC
Sbjct: 450 MHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLC 509
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM-KRKGLDPDV 435
K + DE +LS D D SY ++ LC + +L A + +EM KGL
Sbjct: 510 KEGRLDE---ASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITS 566
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
+N L++A + L A L + M GCS ++ TYN++I+ ++ +++ A LF
Sbjct: 567 HTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDE 626
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
M +G+ + +YT L+ GLC + + A +V + + D
Sbjct: 627 MAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSD 666
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/540 (20%), Positives = 219/540 (40%), Gaps = 51/540 (9%)
Query: 58 PYLLTHHSLALGF---------FNWASQQPNFTHSP--LSYHSILKSLSLSRQINAIDSV 106
P ++T+ LA G F + +P ++Y++++ L + + +
Sbjct: 113 PDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYEL 172
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS-VFNEVKFNCEDIGPEICN--SLLAV 163
L+ + + D Y I+ L + KA V +K C P + +L+
Sbjct: 173 LETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCT---PSVITYTALMEG 229
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR----- 218
L G +D A +F EM + + + + +C++++ + ++D +R
Sbjct: 230 LCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDV 289
Query: 219 ---------------------ENSMINGSVIAV----LIIHGFCKGKRVEEAFKVLDELR 253
E+ G V + +++ G CK +V+EAF L+ +
Sbjct: 290 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 349
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
C PD ++Y I+ + E VL + + G+ P Y + E R
Sbjct: 350 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFD 409
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSN-L 371
+A + + ++ D+ N LI +S + A + M+ G V + T N +
Sbjct: 410 DAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTI 469
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
LCK + + + ++ + + +YN+ + LC GRL EA ++ EM L
Sbjct: 470 IDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT--L 527
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
+VS+ ++ C E L R +K + + G T+N+LI F++ ++ AL
Sbjct: 528 RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALT 587
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
L M+++G +P TY ++ LC+ + A+E+F++ ++ + + + LC
Sbjct: 588 LLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLC 647
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 120/245 (48%), Gaps = 1/245 (0%)
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAI 350
VAP Y I GL + +A E+ +V T D N+++ G + A
Sbjct: 6 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
M E+ P+ T + L LCK+ D + ++ + D+ +Y+++ L
Sbjct: 66 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGL 125
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C GR+ EA+ +++EM G P++ YN+L++ C+ A +L + + +SG ++
Sbjct: 126 CKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDV 185
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TY I++ + G ++ AL++ ML++G P TYT+L+EGLC+ + A +F +
Sbjct: 186 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 245
Query: 531 SVNHD 535
V+ D
Sbjct: 246 MVSKD 250
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 89/178 (50%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M E+ P + T + L LCK +K+D+ E+ + D ++N ++ LC +G+
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
A+ ++ M + P YN+L+ C++ + AK L D+ +SG ++ TY+I
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
L + G I+ A L M G P+ TY +L++GLC+ + + A+E+ V+
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVS 178
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 147/353 (41%), Gaps = 10/353 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+ ++ L +++ L+ + D Y II L + ++A V +++
Sbjct: 324 TYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQM 383
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
I P+ N+L+A + D+A+ + M GV+ + + I +
Sbjct: 384 IQ--AGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTN 441
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+LG ++ E+ R +++ II CK +++A ++D + + + +
Sbjct: 442 RLGDAYELMHEML-RNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVT 500
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y I + G + E +L + L Y I+GL ++ A +L +V
Sbjct: 501 YNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREMV 557
Query: 324 SGK-FTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
+ K I N LI + + A+ M+++G P++ T + + LCK +K
Sbjct: 558 AVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKV 617
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
D+ E++ ++ SY V++ LC GR +EA V++EM + D
Sbjct: 618 DKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEID 670
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%)
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M + + PDV YN L++ C+ A ++ +M G + + T+N ++ + G+
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
E A L M E+ P TY +L+ GLC++ N+ A + ++ V+ + S
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 546 FMISLCRR 553
LC+R
Sbjct: 121 LADGLCKR 128
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 210/452 (46%), Gaps = 9/452 (1%)
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
FN Q N T S + + IL SL + + + S+ +Q++ N I + +I
Sbjct: 56 FNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFS 115
Query: 131 QGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTI 190
Q + +FSVF+ + + +L+ L G I AL D++ G + + +
Sbjct: 116 QLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQV 175
Query: 191 GFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVL 249
+ I C K+GQ + L+ +R+ + ++ V+ II G CK K V +AF
Sbjct: 176 SYRTLINGLC---KVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFY 232
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
E+ + P + Y + +MG + + +L K + P + + E
Sbjct: 233 SEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKE 292
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLS 366
++ EAK + V++ + N+L+ V+ ++ +I FN M + G P +
Sbjct: 293 GKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESI--FNTMAQIGVAPDVH 350
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
+ S + CK DE +++++ + F D+ +YN ++ LC SGR+ A +I EM
Sbjct: 351 SYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEM 410
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
+G P++ YNSL++A C+ + A +L ++ ++ TYNILI+ + G +
Sbjct: 411 HDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRL 470
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ A ++F ++L G D TY ++++G C++
Sbjct: 471 KDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKK 502
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 188/400 (47%), Gaps = 8/400 (2%)
Query: 61 LTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS 120
L H+SL+ F+ ++ + ++ +++K L L I+ +V L+
Sbjct: 117 LGHNSLSFSVFSNILKK-GYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQV 175
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
YR +I L + T+ A + + + + N+++ + D +++A + EM
Sbjct: 176 SYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEM 235
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKG 239
+ + + + + I C +L + +L ++ EN IN +V +++ FCK
Sbjct: 236 VAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMI-LEN--INPTVYTFSILVDAFCKE 292
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+V+EA V + ++ KP+ + Y + + L+ V + E + ++GVAP + Y
Sbjct: 293 GKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSY 352
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIE 358
I G + + EA +L E + + D N+LI G S A+ M +
Sbjct: 353 SIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHD 412
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
+G+ P + T ++L LCK + D+ +E+ L ++ + +YN++++ LC SGRL++
Sbjct: 413 RGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKD 472
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
A V +++ G + DV YN++++ C++ + P + W
Sbjct: 473 AQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFVIP--QFW 510
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 191/421 (45%), Gaps = 19/421 (4%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMF 177
Y +I L + NT A + + + NC+ P++ S++ L D + A +F
Sbjct: 174 TYGTLINGLCKVGNTNAAIRLLRSMEQGNCQ---PDVVVYTSIIDSLCKDRQVTEAFNLF 230
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLII---- 233
+M +G+ + I C + V ++L N MIN ++ ++I
Sbjct: 231 SKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLL-------NQMINSKIMPDVVIFSTV 283
Query: 234 -HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
CK ++ EA V+D + IR +P+ + Y + + L + E V G
Sbjct: 284 VDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGY 343
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIV 351
AP Y I G +R+ +A L E + + + N L+ + + + AI
Sbjct: 344 APNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIA 403
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F+ M+ G++P L+T L LCK++ DE + + K + ++ D++ Y +++ +C
Sbjct: 404 LFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMC 463
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+G L A + + KGL P+V Y ++ CR LL A KL+ +M +GCS +
Sbjct: 464 RAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGC 523
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
TYN + + E A++L ML +G + D +T T L+E LC + Q+ ++ ++
Sbjct: 524 TYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEF 583
Query: 532 V 532
V
Sbjct: 584 V 584
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/537 (22%), Positives = 221/537 (41%), Gaps = 65/537 (12%)
Query: 58 PYL--LTH---HSLALGFFNWASQQPNFT-----HSPLS---YHSILKSLSLSRQINAID 104
PY L+H HS +L F +F H P S ++ +L S++ ++Q +
Sbjct: 28 PYFSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVF 87
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEICN--SLL 161
S+ Q+ I D +I S AFSV ++ K + P+ +L+
Sbjct: 88 SLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQ---PDTATFTTLI 144
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
L +G I +AL +FD+M G + + + +G I C K+G + + +R E
Sbjct: 145 RGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLC---KVGNTNAAIRLLRSMEQG 201
Query: 222 MINGSVIAVL-IIHGFCKGKRVEEAFKV-------------------------------- 248
V+ II CK ++V EAF +
Sbjct: 202 NCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHV 261
Query: 249 ---LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
L+++ + PD + + V + G + E V+ GV P Y + G
Sbjct: 262 TTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDG 321
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPT 364
++ + EA ++ + +V + + N LI I A F M +K +P
Sbjct: 322 HCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPN 381
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
T + L LC + + + ++ + A+ D+ +Y +++ +LC L EA +++
Sbjct: 382 TVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLK 441
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
++ +DPD+ Y +++ CR L A+ ++ + + G N++TY I+I+ G
Sbjct: 442 TIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRG 501
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
++ A +LF M G +PD TY ++ +GL Q A ++ + MLAR
Sbjct: 502 LLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQE------MLARG 552
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 177/386 (45%), Gaps = 5/386 (1%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D+AL F+ M H ST+ F + + + V S+ +++ ++ I V
Sbjct: 48 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQM---DSFGIPPDVYT 104
Query: 230 V-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+ ++I+ FC R AF VL ++ +PD + + + G + + + K
Sbjct: 105 LNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMI 164
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPR 347
G P Y I GL A L + G D V ++I S+
Sbjct: 165 GEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVT 224
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A F+ M+ +G P + T ++L +LC + + + + + D+ ++ +V
Sbjct: 225 EAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVV 284
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
LC G++ EA+ V+ M +G++P+V YN+LM+ C + + A K++D M +G +
Sbjct: 285 DALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYA 344
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N+ +YN LI+ + ++ ++ A LF M +K + P+ TY +L+ GLC LQ A +
Sbjct: 345 PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIAL 404
Query: 528 FNKSVNHDVMLARSILSTFMISLCRR 553
F++ V H + + + LC++
Sbjct: 405 FHEMVAHGQIPDLATYRILLDYLCKK 430
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 1/163 (0%)
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
VLS YF+ + S+N S L +A M P +N L+ + +
Sbjct: 23 VLSLPPYFSSL-SHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTK 81
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
L +QM + G ++ T NILI+ F + A + +L+ G+ PD T+T
Sbjct: 82 QYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFT 141
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+L+ GLC E + A +F+K + T + LC+
Sbjct: 142 TLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 133/542 (24%), Positives = 236/542 (43%), Gaps = 17/542 (3%)
Query: 18 ISASNRTRPARKWTPLLEQTLHQLGLRDS---LSPSLVARVINPYLLTHHSLALGFFNWA 74
I + + PA +W LLE LR S ++P + +++ L L F
Sbjct: 46 IKMNVESEPATEWESLLE-PFDLTKLRKSHILITPVQLCKLLE--LPLDVPTLLEIFERV 102
Query: 75 SQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN 134
Q + H+ Y+ + L + ID +L Q+K I S++ I+ +
Sbjct: 103 GGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQ 162
Query: 135 TQKAFSVFNEVK--FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
+A + +++ + CE + +L +L + A +F +M +GV + F
Sbjct: 163 PGQAIRLLLDMRAVYLCEPTFKSY-DLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTF 221
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
G+ + C ++ S+L ++ K + + S++ +IH + +V EA K+L+E+
Sbjct: 222 GIVMKALCMFNEVDSACSLLRDMTK--HGCVPNSIVYQTLIHALSQKNQVSEALKLLEEM 279
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
+ C PD + V + + + ++ + G P Y + GL ++
Sbjct: 280 FVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKL 339
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFN-FMIEKGRVPTLSTLSN 370
EA+++ I ++ +LN LI G V S + A F N MI G P + T +
Sbjct: 340 NEARKILIKIPCP----NNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNI 395
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LCK ++ +S ++ +Y ++V+ LC +G L EA V+ EM +G
Sbjct: 396 LMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARG 455
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L + YN L+ A CR++ + A L +M GC +L TYN LI +V I+ A
Sbjct: 456 LTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAF 515
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
RLFHNML G + TY +L+ L + Q A + N + L + + + +
Sbjct: 516 RLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAF 575
Query: 551 CR 552
C+
Sbjct: 576 CK 577
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 210/449 (46%), Gaps = 10/449 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++ ++K+L + ++++ S+L+ + + +S VY+ +I +L Q +A + E
Sbjct: 219 FTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEE 278
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + N ++ L I +A K+ D M RG + +G + C K
Sbjct: 279 MFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGK 338
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR-ECKPDFIA 263
L + +L ++ N+++N +I+G+ +++EA L+E I +PD
Sbjct: 339 LNEARKILIKIPCPNNAILN------TLINGYVMSGQLKEAQSFLNETMINFGFQPDIFT 392
Query: 264 YRIVAEEFKLMGSV-FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y I+ GS+ F R++V + R+ G P Y + GL + EA + +
Sbjct: 393 YNILMHGLCKEGSLSFARDLVNEMSRR-GCEPNVITYAILVNGLCKAGLLEEAGLVLHEM 451
Query: 323 VSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
+ TI+ + N LI ++ + A+ + M KG P L T ++L LCK ++
Sbjct: 452 SARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRI 511
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
DE ++ + + + +YN ++ L G ++A ++ +M +G D YN L
Sbjct: 512 DEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGL 571
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
++A C+ + +L++QM G + + NI+I+ +VG+++ A + + +G
Sbjct: 572 IKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGF 631
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNK 530
PD TY S+L GLC+ ++ A +F++
Sbjct: 632 VPDIVTYNSVLNGLCKVGRIKEALNLFDR 660
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 77/172 (44%), Gaps = 2/172 (1%)
Query: 384 LVEVY-KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
L+E++ +V Y + Y V ++ L G+ + ++ +MK +G+ S + +M
Sbjct: 95 LLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIM 154
Query: 443 EACCREDLLRPAKKLWDQMFASG-CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ + A +L M A C K+Y++++ + A +F++ML KGV
Sbjct: 155 KHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGV 214
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+P T+ +++ LC + +A + H + + T + +L ++
Sbjct: 215 SPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQK 266
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 178/362 (49%), Gaps = 7/362 (1%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L+ L+ +G I AL + EM V+ + + + I C++ + L + ++ +R
Sbjct: 165 TLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGER 224
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
++ +V +I G C R +E ++L ++ PD + I+ + G +
Sbjct: 225 --GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
E + VL K G P Y + G + EA+EL +V K ++ DVLN +
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV--KRGLEPDVLNYNV 340
Query: 339 ---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
G + A+V F + K VPT+++ ++L LC + + ++ + +
Sbjct: 341 LIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSA 400
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D+ +YN+++ LC GR+ EA GV+ M +KG+ P++ YN++M+ C + + AK
Sbjct: 401 QPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAK 460
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
++++M SG ++ YN+LI+ + + ++ A+ LF M K + PD +Y SL++GL
Sbjct: 461 DIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGL 520
Query: 516 CQ 517
C
Sbjct: 521 CN 522
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 123/550 (22%), Positives = 235/550 (42%), Gaps = 51/550 (9%)
Query: 46 SLSPSLVAR--VINPYLLTHHSLALGFFNWAS-----QQPNFTHSPLSYHSILKSLSLSR 98
+SPS+ +IN Y H+ A F A+ QPN +++++I+ ++
Sbjct: 85 GISPSIATFTILINCYFHQSHT-AFAFSLLATILKSGYQPNL----VTFNTIINGFCING 139
Query: 99 QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN 158
I + + D Y +I L + + A + E++ + + +
Sbjct: 140 MIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYS 199
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L+ L DG++ +AL + ++ RG+ + + I C + +V +L ++ R
Sbjct: 200 ALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM-VR 258
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
EN + +LI CK R+ EA VL + R KPD + Y + E + +V
Sbjct: 259 ENVDPDDYTFNILI-DALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVH 317
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA---------KELGEVIVSGKFTI 329
E + + K G+ P +Y I G + + EA K L I S I
Sbjct: 318 EARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLI 377
Query: 330 DD-----------DVLNALIGSVSSIDPRSAIVFFNFMIEKGRV---------------- 362
D +L+ + GS D + + + + ++GR+
Sbjct: 378 DGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVK 437
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + T + + C RN + +++ + + D+ +YNV+++ C + + EA +
Sbjct: 438 PNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVL 497
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+EM+ K L PD++ YNSL++ C + ++L D+M SG S ++ TYNIL+ F +
Sbjct: 498 FKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCK 557
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
+ A+ LF ++E G+ PD T ++++ LC+ L+ A + + H
Sbjct: 558 TQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQT 616
Query: 543 LSTFMISLCR 552
+ + +LC+
Sbjct: 617 YTILINALCK 626
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 182/435 (41%), Gaps = 36/435 (8%)
Query: 133 KNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
+N A + FN + + + LL + G+ A+ +F ++ +G+ S F
Sbjct: 34 RNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATF 93
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRE--------NSMINGSVIAVLI------------ 232
+ I + + S+L + K N++ING I +I
Sbjct: 94 TILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153
Query: 233 -------------IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
I+G K +++ A +L E+ +P+ + Y + + G V +
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+ + + G+ Y I G R E +L +V DD N LI
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273
Query: 340 SVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
++ + R A M ++G P + T + L + C R E E++ +
Sbjct: 274 ALCK-EGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLE 332
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D+ +YNV++ C + + EA + +E+ K L P ++ YNSL++ C + KKL
Sbjct: 333 PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKL 392
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
D+M S ++ TYNILI + G I AL + M++KGV P+ TY ++++G C
Sbjct: 393 LDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCL 452
Query: 518 ETNLQAAFEVFNKSV 532
N+ A ++FN+ V
Sbjct: 453 RNNVNVAKDIFNRMV 467
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 192/448 (42%), Gaps = 3/448 (0%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
S+ Q++ I+ + + +I +T AFS+ + + N+++
Sbjct: 76 SLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGF 135
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
+G I AL + +G F +G I +N ++ L +L E+ K +S+
Sbjct: 136 CINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEK--SSVQP 193
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
V+ +I G CK V +A + ++ R D + Y + + +G E +L
Sbjct: 194 NLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLL 253
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSS 343
K + V P + I L E RI EA+ + ++ D NAL+ G S
Sbjct: 254 TKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSR 313
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ A FN M+++G P + + L CK DE + ++K L + + SY
Sbjct: 314 ENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASY 373
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N ++ LC SGR+ ++ EM PDV YN L++A C+E + A + M
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G N+ TYN ++ + + A +F+ M++ G+ PD Y L+ G C+ +
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDE 493
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLC 551
A +F + + +++ + ++ + LC
Sbjct: 494 AIVLFKEMRHKNLIPDIASYNSLIDGLC 521
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 196/450 (43%), Gaps = 22/450 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+S++ + + +L ++ + D + +I +L + +A V
Sbjct: 231 VTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAM 290
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ E P+I N+L+ S + A ++F+ M RG+E + + V I +C+
Sbjct: 291 MSKRGEK--PDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKT 348
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVL-----IIHGFCKGKRVEEAFKVLDELRIREC 257
M+DE + N +++ + +I G C R+ K+LDE+
Sbjct: 349 -------KMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ 401
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
PD + Y I+ + G + E VL K GV P Y + G + + AK+
Sbjct: 402 PPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKD 461
Query: 318 LGEVIVSGKFTIDDDVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+ +V K ++ D+LN + G + AIV F M K +P +++ ++L
Sbjct: 462 IFNRMV--KSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LC + + E+ + + D+ +YN+++ C + +A + +++ +G+ PD
Sbjct: 520 LCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPD 578
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+++++ C+ + L+ A+ + GCS N++TY ILI+ + G A+ L
Sbjct: 579 FYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLS 638
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
M + PDA T+ ++ L Q A
Sbjct: 639 KMEDNDRPPDAITFEIIIGVLLQRNETDKA 668
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 162/385 (42%), Gaps = 10/385 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+++++ ++ + ++ + D Y +I + K +A +F E
Sbjct: 301 VTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKE 360
Query: 145 VKFNC-EDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ C +++ P I NSL+ L + G I + K+ DEM + + + I C+
Sbjct: 361 L---CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCK 417
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
++ + L +L + K+ + V ++ G+C V A + + + +PD
Sbjct: 418 EGRILEALGVLVMMMKK--GVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDI 475
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ Y ++ + V E V+ K+ R + P Y I GL RI +EL +
Sbjct: 476 LNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDE 535
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ + D N L+ + P AI F ++E G P T + NLCK K
Sbjct: 536 MCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEK 594
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+ K L + ++++Y ++++ LC G EA ++ +M+ PD +
Sbjct: 595 LKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEI 654
Query: 441 LMEACCREDLLRPAKKLWDQMFASG 465
++ + + A+KL ++M A G
Sbjct: 655 IIGVLLQRNETDKAEKLREEMIARG 679
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%)
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G A + +++ KG+ P ++ + L+ + A L + SG NL T+
Sbjct: 69 GHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTF 128
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
N +I+ F G I AL N+L +G D TY +L+ GL + ++AA + +
Sbjct: 129 NTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEK 188
Query: 534 HDVMLARSILSTFMISLCR 552
V + S + LC+
Sbjct: 189 SSVQPNLVMYSALIDGLCK 207
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 46/106 (43%)
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C + +A M R P S ++ L+ A R A L+ Q+ + G S ++
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
T+ ILI+ + A L +L+ G P+ T+ +++ G C
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFC 136
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 209/434 (48%), Gaps = 6/434 (1%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
Y +I ++ ++ +AF V E+ + N+L+ + G ++ A + +EM
Sbjct: 344 YTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMI 403
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
G++ T + I + + +V +L E++K ++++ + +II+G C+
Sbjct: 404 MVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKK--SNLVPTAYTCGMIINGLCRHGS 461
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+E+A +V + + KP+ + Y + + G E +LK K GV P Y
Sbjct: 462 IEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNS 521
Query: 302 FILGLIVERRICEAKE-LGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK 359
I+GL R++ EAK+ L E+I G + ALI G S + + A +F M+
Sbjct: 522 VIIGLCKSRKMEEAKDYLVEMIERG-LKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGC 580
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P + L CK + E +++ + D+ +Y+ ++ L +G+L+ A
Sbjct: 581 GIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGA 640
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
++ E KGL PDV YNS++ C++ + A +L + M G S N+ TYN LI+
Sbjct: 641 MELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALING 700
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ GEIE A LF + KG+A +A TY ++++G C+ NL AF +F++ V
Sbjct: 701 LCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVP-P 759
Query: 540 RSILSTFMISLCRR 553
S + + +I CR+
Sbjct: 760 DSFVYSALIDGCRK 773
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 137/587 (23%), Positives = 226/587 (38%), Gaps = 93/587 (15%)
Query: 28 RKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSY 87
+ W LL + + LSP +V VI + L L FFNW Q F+ S+
Sbjct: 52 KNWESLLPL------VSNKLSPDVVHSVITKQVNDPKRL-LDFFNWVQFQMGFSQKLQSF 104
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT------------ 135
+ L SR + DSV+ Q+ I + S Y I+ SLI+
Sbjct: 105 SILALILCNSRLFSRADSVVNQM----IMMSSGGYSEILDSLIKSCKEFDLNNVNGNENS 160
Query: 136 ----------------------QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNA 173
+A S F K N +G CN LL+ L ++
Sbjct: 161 NNNDRGVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELF 220
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKF--CENAKLGQVLSMLDEVRKRENSMINGSVIAVL 231
+ ++ M V + I NAK G+ L E + S++ +V
Sbjct: 221 WRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNV---- 276
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I G C+ V+EAF++ + + D Y I+ + F E +++L++ G
Sbjct: 277 VIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKG 336
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAI 350
+ P Y I G + + EA + E +++ ++ NAL+ V D A
Sbjct: 337 LKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKAD 396
Query: 351 VFFNFMIEKG-----------------------------------RVPTLSTLSNLSKNL 375
N MI G VPT T + L
Sbjct: 397 ALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGL 456
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C+ ++ V++++ + + Y ++ GR +EA +++ M +KG+ PDV
Sbjct: 457 CRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDV 516
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YNS++ C+ + AK +M G N+ TY LI + + GE++ A R F
Sbjct: 517 LCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKE 576
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
ML G+AP+ T+L++G C+E + A +F ML RS+
Sbjct: 577 MLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFR------CMLGRSV 617
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/473 (21%), Positives = 185/473 (39%), Gaps = 45/473 (9%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
L Y+S++ L SR++ L ++ + + Y +I + Q A F E
Sbjct: 517 LCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKE 576
Query: 145 VKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ C I P +C +L+ +G A +F M R V + I N
Sbjct: 577 M-LGC-GIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRN 634
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
KL + +L E E ++ II GFCK + +AF++
Sbjct: 635 GKLQGAMELLSEFL--EKGLVPDVFTYNSIISGFCKQGGIGKAFQL-------------- 678
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
E + +K G++P Y I GL I A+EL + I
Sbjct: 679 -----------------HEYMCQK----GISPNIITYNALINGLCKAGEIERARELFDGI 717
Query: 323 VSGKFTIDDDVLNALI--GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
GK + V A I G S + A F+ M KG P S L K
Sbjct: 718 -PGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGN 776
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+++ + ++ + S F S N ++ C SG++ EA ++++M K + PD Y
Sbjct: 777 TEKALSLF-LESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTI 835
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L++ C+ L+ A++ + M N TY L+S ++ G LF M+ K
Sbjct: 836 LIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKD 895
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ PD T++ +++ +E + ++ + + +++++ + LCR+
Sbjct: 896 IEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRK 948
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/398 (20%), Positives = 176/398 (44%), Gaps = 8/398 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALK 175
D Y +I L++ Q A + +E F + + P++ NS+++ G I A +
Sbjct: 620 DVRTYSALIHGLLRNGKLQGAMELLSE--FLEKGLVPDVFTYNSIISGFCKQGGIGKAFQ 677
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ + M +G+ + I + I C+ ++ + + D + + + + +V II G
Sbjct: 678 LHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGK--GLAHNAVTYATIIDG 735
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
+CK + +AF++ DE+ ++ PD Y + + + G+ + + + + G A
Sbjct: 736 YCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFAS- 794
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFN 354
T+ + G ++ EA +L E +V D LI + A FF
Sbjct: 795 TSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFV 854
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M ++ +P T + L + E+ ++ + A D D +++VM+ G
Sbjct: 855 DMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEG 914
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ ++ +M +KG + + + L++ CR++ + K+ +++ G + +L T +
Sbjct: 915 DHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCS 974
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
L+ F + G+++GA R+ +M+ PD+T L+
Sbjct: 975 TLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M EKG P+L T + + LC+ + DE E+ K++ D+ +Y++++ R
Sbjct: 262 MEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKR 321
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
EA +++EM KGL P Y +L++ R+ A ++ ++M A G NL TYN
Sbjct: 322 CTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNA 381
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
L+ + G++E A L + M+ G+ PD TY +++EG +E N ++ ++ +
Sbjct: 382 LVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSN 441
Query: 536 VMLARSILSTFMISLCRR 553
++ + LCR
Sbjct: 442 LVPTAYTCGMIINGLCRH 459
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 6/176 (3%)
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K+ DE V + N + + N ++S L + +L + M + DV
Sbjct: 178 KKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVY 237
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
Y L+ A R + K+L +M GCS +L TYN++I GE++ A L M
Sbjct: 238 TYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLM 297
Query: 497 LEKGVAPDATTYTSLLEGL-----CQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
+KG+ D TY+ L++G C E L E+F+K + + +++ FM
Sbjct: 298 DKKGLVADVFTYSILIDGFGKQKRCTEAKLMLE-EMFSKGLKPGHVAYTALIDGFM 352
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/454 (18%), Positives = 179/454 (39%), Gaps = 59/454 (12%)
Query: 6 ATDLATRISQAIISASNRTRP-ARKWTPLLEQTLHQLGLRDSLS--PSLVARVINPYLLT 62
+T AT I + ++ S P R ++ L+ L L+ ++ + + + P + T
Sbjct: 601 STTEATSIFRCMLGRS--VHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFT 658
Query: 63 HHSLALGFFNWAS-----------QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVK 111
++S+ GF Q + + ++Y++++ L + +I + +
Sbjct: 659 YNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIP 718
Query: 112 VNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGY 169
+ ++ Y II + N KAF +F+E+ + + P+ + ++L+ +G
Sbjct: 719 GKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTL--KGVPPDSFVYSALIDGCRKEGN 776
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+ AL +F E +G F + L ++
Sbjct: 777 TEKALSLFLESVQKG--------------FASTSSLNALMD------------------- 803
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
GFCK +V EA ++L+++ + KPD + Y I+ + G + E E +K
Sbjct: 804 -----GFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQK 858
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS-VSSIDPRS 348
+ P Y + G + R E L + +++ D + +I + + D
Sbjct: 859 RNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVK 918
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
+ + M++KG + + L LC++ E+++V + + + + + +V
Sbjct: 919 TLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVR 978
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
+G++ A V++ M R PD + N L+
Sbjct: 979 CFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 203/452 (44%), Gaps = 9/452 (1%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S + + L S++ +Q ++ S+ Q+ + +T + +I L + + A SV
Sbjct: 95 SVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVM 154
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
++ F I P+ N+L+ L ++G I A+ +F+EM G E + I + I C
Sbjct: 155 GKM-FKL-GIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLC 212
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+N G + + RK E + +V+ II CK + V EA + L E+ R P
Sbjct: 213 KN---GNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPP 269
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D + Y + F +G + E + K+ V P T + + GL E + EA+ +
Sbjct: 270 DVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVS 329
Query: 320 EVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
E + + NAL+ G AI MI KG P LS+ + L CK
Sbjct: 330 ETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKS 389
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+ +E + +S + D +Y+ ++ LC GR REA + +EM GL PD+ Y
Sbjct: 390 KRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAY 449
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
+ L++ C+ L A KL +M N+ Y ILI G++E A LF +
Sbjct: 450 SILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSA 509
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
G+ PD TY +++GL +E A+E F K
Sbjct: 510 DGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRK 541
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 204/453 (45%), Gaps = 3/453 (0%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
TH+ S + ++ L ++ SV+ ++ I D+ + +I L ++A
Sbjct: 128 THNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVG 187
Query: 141 VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+FNE+ ++ + N+++ L +G A+++F +M + + + + I C
Sbjct: 188 LFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLC 247
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
++ + + + L E+ R + V I+HGFC ++ EA ++ E+ R PD
Sbjct: 248 KDRLVNEAVEFLSEMVDR--GIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPD 305
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ + I+ + G V E V + + G P Y + G + ++ EA ++
Sbjct: 306 TVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLG 365
Query: 321 VIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+++ + N LI G S A + M EK P T S L + LC+
Sbjct: 366 IMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVG 425
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ E + ++K + ++ D+ +Y++++ C G L EA +++EM + + P++ Y
Sbjct: 426 RPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYT 485
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
L+ L AK+L+ ++ A G ++ TYN++I + G + A F M +
Sbjct: 486 ILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDD 545
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
G PD+ +Y +++G Q + A ++ ++ V
Sbjct: 546 GFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMV 578
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 167/394 (42%), Gaps = 36/394 (9%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L +A +A+ + ++M GV + V I C + + +S++ ++ K
Sbjct: 102 FLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKL- 160
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+ ++ +I+G C +++EA + +E+ +P+ I+Y V G+
Sbjct: 161 -GIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIM 219
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
V +K + P Y I L +R + EA E
Sbjct: 220 AVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVE---------------------- 257
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
F + M+++G P + T + + C + +E ++K + + D
Sbjct: 258 ------------FLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPD 305
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
++N++V LC G + EA V + M KG +P+ YN+LM+ C + + A K+
Sbjct: 306 TVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLG 365
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
M GC+ NL +YNILI+ + + + A RL M EK + PD TY++L++GLCQ
Sbjct: 366 IMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVG 425
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ A +F + + ++ S + C+
Sbjct: 426 RPREALNLFKEMCSSGLLPDLMAYSILLDGFCKH 459
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 175/393 (44%), Gaps = 3/393 (0%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
Y +I L + NT A VF +++ N N+++ L D ++ A++ EM
Sbjct: 204 YNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMV 263
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
RG+ + + + FC +L + + E+ R +++ +V +++ G CK
Sbjct: 264 DRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGR--NVMPDTVTFNILVDGLCKEGM 321
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
V EA V + + + +P+ Y + + + L + E VL G AP + Y
Sbjct: 322 VSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNI 381
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKG 360
I G +R+ EAK L + T D + L+ + + PR A+ F M G
Sbjct: 382 LINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSG 441
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
+P L S L CK DE +++ K + ++ Y +++ + +G+L A
Sbjct: 442 LLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAK 501
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+ ++ G+ PD+ YN +++ +E L A + + +M G + +YN++I F
Sbjct: 502 ELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGF 561
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
+ + A++L M+ K + D++T+ LL+
Sbjct: 562 LQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%)
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
SA+ N M G + +L+ L LC+ + D V V + D ++N ++
Sbjct: 114 SAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLI 173
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+ LC G+++EA G+ EM G +P+V YN+++ C+ A +++ +M +
Sbjct: 174 NGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGK 233
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N+ TYN +I + + A+ M+++G+ PD TY ++L G C L A +
Sbjct: 234 PNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRL 293
Query: 528 FNKSVNHDVMLARSILSTFMISLCRRVLI 556
F + V +VM + + LC+ ++
Sbjct: 294 FKEMVGRNVMPDTVTFNILVDGLCKEGMV 322
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 175/431 (40%), Gaps = 75/431 (17%)
Query: 67 ALGFFN---WASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
A+G FN W+ +PN +SY++++ L + V ++++ N+ + Y
Sbjct: 185 AVGLFNEMVWSGHEPNV----ISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYN 240
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMS 181
II SL + + +A +E+ I P++ N++L S G ++ A ++F EM
Sbjct: 241 TIIDSLCKDRLVNEAVEFLSEMVD--RGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMV 298
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE--------NSMING-------- 225
R V T+ F + + C+ + + + + + ++ N++++G
Sbjct: 299 GRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMD 358
Query: 226 ---SVIAVLI--------------IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVA 268
V+ ++I I+G+CK KR+ EA ++L E+ + PD + Y +
Sbjct: 359 EAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLM 418
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA----KELGE---- 320
+ +G E + K+ G+ P Y + G + EA KE+ E
Sbjct: 419 QGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIK 478
Query: 321 -------VIVSGKFTIDD-DVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
+++ G F +V L +S+ R I +N MI
Sbjct: 479 PNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMI--------------- 523
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
K L K SDE E ++ + + + D SYNV++ + A +I EM K
Sbjct: 524 KGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFS 583
Query: 433 PDVSFYNSLME 443
D S + L++
Sbjct: 584 ADSSTFQMLLD 594
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 189/397 (47%), Gaps = 3/397 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L G ++ A ++ M G + ++ F + I +C +G+ L +LDE+ K
Sbjct: 372 NVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEK 431
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R +++ +V +I+G C K + A K+L+++ KP+ + Y I+ + G +
Sbjct: 432 R--NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRI 489
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E +L GVAP Y I L ++ EA I D A
Sbjct: 490 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 549
Query: 338 IGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I S + A +F+ M++ G +P + L K E + +++ L A
Sbjct: 550 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGV 609
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+++ + + L +GR++EA V E+K KGL PDV Y+SL+ C++ + A +
Sbjct: 610 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 669
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L D+M G + N+ YN L+ + G+I+ A +LF M EKG+ PD+ TY+++++G C
Sbjct: 670 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 729
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ N+ AF +F++ + V + + + C+
Sbjct: 730 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE 766
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/516 (23%), Positives = 226/516 (43%), Gaps = 43/516 (8%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ N S +SY +++ L + ++ + +L+++ + + + VY +I +
Sbjct: 430 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRI 489
Query: 136 QKAFSVFNEVKFNCEDIGPEI-C-NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
++A + + + +C + P+I C N++++ L+ G ++ A E+ RG++ + FG
Sbjct: 490 EEARRLLDGM--SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 547
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI--------------------- 232
FI + + K+ + DE+ M N + VLI
Sbjct: 548 AFILGYSKTGKMTEAAKYFDEMLDH-GLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHA 606
Query: 233 -------------IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
IHG K RV+EA KV EL+ + PD Y + F G V E
Sbjct: 607 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEV-E 665
Query: 280 REVVLKKKRKL-GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
+ L + L G+AP Y + GL I A++L + + D + +I
Sbjct: 666 KAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMI 725
Query: 339 -GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
G S + A F+ M KG P + L CK ++ + +++ + +
Sbjct: 726 DGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA 785
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
T + S+N ++ C S +++EA + QEM K + PD Y ++++ C+ + A L
Sbjct: 786 TTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLL 844
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ +M + TY L+ ++++G+ LF M+ KGV PD TY ++ C+
Sbjct: 845 FKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCK 904
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
E NL AF++ ++ V ++ +I + +LC+R
Sbjct: 905 EDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKR 940
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 196/436 (44%), Gaps = 18/436 (4%)
Query: 103 IDSVL--KQVKVN-KITLDSSVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEICN 158
ID VL K V V+ I ++ Y +I L + +KA + V C+ N
Sbjct: 349 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKP------N 402
Query: 159 SLLAVLASDGY-----IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
S L +GY + AL++ DEM R + S + +G I C L +L+
Sbjct: 403 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 462
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
++ + + V+ ++I + R+EEA ++LD + PD Y +
Sbjct: 463 KMTF--SGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSK 520
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
G + E L + + G+ P + FILG ++ EA + + ++ ++ +
Sbjct: 521 AGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPL 580
Query: 334 LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
LI G + + A+ F + G +P + T S L K + E ++V+ L
Sbjct: 581 YTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK 640
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D+ +Y+ ++S C G + +A+ + EM KG+ P++ YN+L++ C+ ++
Sbjct: 641 EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQ 700
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A+KL+D M G + TY+ +I + + + A LFH M KGV P + Y +L+
Sbjct: 701 RARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 760
Query: 513 EGLCQETNLQAAFEVF 528
G C+E +++ A +F
Sbjct: 761 HGCCKEGDMEKAMNLF 776
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/509 (22%), Positives = 210/509 (41%), Gaps = 20/509 (3%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSV 106
L+P ++ V++ + L FF W+ Q S+ + L S + V
Sbjct: 69 LNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGV 128
Query: 107 LKQVKVNKIT----LDSSVYRF-------------IIPSLIQGKNTQKAFSVFNEVKFNC 149
L Q+ + LDS ++ F +I S + +A +VF K +
Sbjct: 129 LTQMIRTPYSSSSILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDS 188
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
I CNSLL L G ++ K+++ M + F + + C+ L
Sbjct: 189 ILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAK 248
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+L E+ E + I L+I G C+ ++EA ++ + + P+ Y I+
Sbjct: 249 RVLIEM--DEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITA 306
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
+ E ++ ++ +K G+ P N I G + E I E + +V+VS I
Sbjct: 307 GLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI 366
Query: 330 DDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
+ N LI + A M+ G P T L + C+ + +E+
Sbjct: 367 NLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELL 426
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+ + SY M++ LC L A ++++M GL P+V Y+ L+ A E
Sbjct: 427 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASE 486
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
+ A++L D M SG + ++ YN +IS S+ G++E A + +G+ PDA T+
Sbjct: 487 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 546
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ + G + + A + F++ ++H +M
Sbjct: 547 GAFILGYSKTGKMTEAAKYFDEMLDHGLM 575
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 322 IVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
++ K D L+G++ D R A M EKG P S + + +C+
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
DE VE+ + + + +Y ++ + LC + R+ EA +EM++ GL PD + ++
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSA 338
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L++ RE + ++ D M + G NL TYN+LI + G++E A + M+ G
Sbjct: 339 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG 398
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
P++ T+ L+EG C+E N+ A E+ ++ +++ + + LC
Sbjct: 399 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCH 450
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 84/184 (45%)
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
++L K+L K + +VY + D+ +Y +V LC +G LR A V+ EM
Sbjct: 197 NSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDE 256
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
KGL+P+ Y+ ++E C+ + A +L M G N TY I+ + +
Sbjct: 257 KGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNE 316
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
A F M + G+ PD ++L++G +E ++ + + V+ + + + +
Sbjct: 317 AKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIH 376
Query: 549 SLCR 552
LC+
Sbjct: 377 GLCK 380
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 4/170 (2%)
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
DE V+ V + + N ++ L G + + V M + DV Y L
Sbjct: 175 DEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYL 234
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ A C+ LR AK++ +M G + N Y+++I +VG+I+ A+ L +M EKG+
Sbjct: 235 VGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGL 294
Query: 502 APDATTYTSLLEGLCQETNLQAA---FEVFNKS-VNHDVMLARSILSTFM 547
P+ TYT + GLC+ + A FE K+ + D +++ FM
Sbjct: 295 VPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFM 344
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 133/542 (24%), Positives = 236/542 (43%), Gaps = 17/542 (3%)
Query: 18 ISASNRTRPARKWTPLLEQTLHQLGLRDS---LSPSLVARVINPYLLTHHSLALGFFNWA 74
I + + PA +W LLE LR S ++P + +++ L L F
Sbjct: 46 IKMNVESEPATEWESLLE-PFDLTKLRKSRILITPVQLCKLLE--LPLDVPTLLEIFERV 102
Query: 75 SQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN 134
Q + H+ Y+ + L + ID +L Q+K I S++ I+ +
Sbjct: 103 GGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQ 162
Query: 135 TQKAFSVFNEVK--FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
+A + +++ + CE + +L +L + A +F +M +GV + F
Sbjct: 163 PGQAIRLLLDMRAVYLCEPTFKSY-DLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTF 221
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
G+ + C ++ S+L ++ K + + S++ +IH + +V EA K+L+E+
Sbjct: 222 GIVMKALCMFNEVDSACSLLRDMTK--HGCVPNSIVYQTLIHALSQKNQVSEALKLLEEM 279
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
+ C PD + V + + + ++ + G P Y + GL ++
Sbjct: 280 FVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKL 339
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFN-FMIEKGRVPTLSTLSN 370
EA+++ I ++ +LN LI G V S + A F N MI G P + T +
Sbjct: 340 NEARKILIKIPCP----NNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNI 395
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LCK ++ +S ++ +Y ++V+ LC +G L EA V+ EM +G
Sbjct: 396 LMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARG 455
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L + YN L+ A CR++ + A L +M GC +L TYN LI +V I+ A
Sbjct: 456 LTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAF 515
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
RLFHNML G + TY +L+ L + Q A + N + L + + + +
Sbjct: 516 RLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAF 575
Query: 551 CR 552
C+
Sbjct: 576 CK 577
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 213/451 (47%), Gaps = 14/451 (3%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++ ++K+L + ++++ S+L+ + + +S VY+ +I +L Q +A + E
Sbjct: 219 FTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEE 278
Query: 145 V-KFNC-EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ C D+ + N ++ L I +A K+ D M RG + +G + C
Sbjct: 279 MFVMGCMPDV--QTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRI 336
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR-ECKPDF 261
KL + +L ++ N+++N +I+G+ +++EA L+E I +PD
Sbjct: 337 GKLNEARKILIKIPCPNNAILN------TLINGYVMSGQLKEAQSFLNETMINFGFQPDI 390
Query: 262 IAYRIVAEEFKLMGSV-FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
Y I+ GS+ F R++V + R+ G P Y + GL + EA +
Sbjct: 391 FTYNILMHGLCKEGSLSFARDLVNEMSRR-GCEPNVITYAILVNGLCKAGLLEEAGLVLH 449
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+ + TI+ + N LI ++ + A+ + M KG P L T ++L LCK +
Sbjct: 450 EMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVD 509
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ DE ++ + + + +YN ++ L G ++A ++ +M +G D YN
Sbjct: 510 RIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYN 569
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
L++A C+ + +L++QM G + + NI+I+ +VG+++ A + + +
Sbjct: 570 GLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINR 629
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
G PD TY S+L GLC+ ++ A +F++
Sbjct: 630 GFVPDIVTYNSVLNGLCKVGRIKEALNLFDR 660
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 77/172 (44%), Gaps = 2/172 (1%)
Query: 384 LVEVY-KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
L+E++ +V Y + Y V ++ L G+ + ++ +MK +G+ S + +M
Sbjct: 95 LLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIM 154
Query: 443 EACCREDLLRPAKKLWDQMFASG-CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ + A +L M A C K+Y++++ + A +F++ML KGV
Sbjct: 155 KHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGV 214
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+P T+ +++ LC + +A + H + + T + +L ++
Sbjct: 215 SPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQK 266
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 6/174 (3%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
T ++Y+ ++K+ I + +Q+ ++ + D+ +I L + AF
Sbjct: 562 TLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFE 621
Query: 141 VFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ N P+I NS+L L G I AL +FD + GV + FI
Sbjct: 622 FLRDA-IN-RGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISW 679
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
C+ + S R EN + ++ ++++ K E F VLDEL
Sbjct: 680 QCKEGMVNDACSFF--YRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 133/556 (23%), Positives = 247/556 (44%), Gaps = 56/556 (10%)
Query: 42 GLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSIL----KSLSLS 97
G + L PS+ A ++ L + L F++WA+ P F H+ S++ L KS S +
Sbjct: 70 GCKGRLHPSVAAAIL-AQLDGNAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVKSGSPA 128
Query: 98 RQINAIDSVL-KQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI 156
+ I+ S L + + N T S++ R + G + ++ F ++ + +
Sbjct: 129 KAIDLFRSRLPPRCRPNHFTY-STLLRATYKA---GGDVERTLGFFRRIRSSSRSVADY- 183
Query: 157 CNSLLAVLASDGYIDNALKMF-DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
N +L L G AL++F EM+ GV + + + I C++ +LG + + +E+
Sbjct: 184 -NIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 242
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+R + V +I CK +EEA ++ ++ R C P+ + Y ++ +G
Sbjct: 243 VERGHH--PDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVG 300
Query: 276 SVFE-REVVLKKKRK-LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
+ E RE++ + RK V P Y F+ GL + EA EL + G + D
Sbjct: 301 RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT 360
Query: 334 L--NALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
+ + LI + ID A F+ MI G VP + T + L LCK +K + +
Sbjct: 361 VTFSTLIDGLCKCGQID--EACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 418
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+ + D+ +Y+V+V C + R+ EA ++ M +G P+V +NS+++ C+
Sbjct: 419 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS 478
Query: 449 DLLRPAKKLWDQM--------------------FASGCSGNLK------------TYNIL 476
D A +++D M F +G +G + +N
Sbjct: 479 DRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCC 538
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I+ S++G++ AL++++ MLE + PD T+ L+ G C+ N + A +F + V ++
Sbjct: 539 INGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL 598
Query: 537 MLARSILSTFMISLCR 552
+ LC+
Sbjct: 599 QPDVMTFGALIDGLCK 614
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 196/444 (44%), Gaps = 10/444 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVN--KITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
++Y+S L L +++ ++ +++ D+ + +I L + +A SVF
Sbjct: 324 ITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVF 383
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+++ N+L+ L ++ A M + M +GV I + V + FC+
Sbjct: 384 DDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKA 443
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE-CKPDF 261
+++ + L +L + R V II G CK R EAF++ D++ ++ PD
Sbjct: 444 SRVDEALELLHGMASR--GCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDK 501
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
I Y + + G + E +L P T + I GL + A ++
Sbjct: 502 ITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYNR 557
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
++ + D N LI G+ + + A F M+ K P + T L LCK +
Sbjct: 558 MLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 617
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+ ++ ++ ++ +YN +V LC SGR+ EA ++EM G PD Y S
Sbjct: 618 VEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGS 677
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L+ A CR A +L ++ + G + TYNIL+ + G+ E A+ + M+ KG
Sbjct: 678 LVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKG 737
Query: 501 VAPDATTYTSLLEGLCQETNLQAA 524
PD TY +L++ LC+ +L+ A
Sbjct: 738 HHPDVVTYNTLIDSLCKAGDLEEA 761
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 175/374 (46%), Gaps = 25/374 (6%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L G I+ A + +EM G +I +G ++ C ++ L ++ E++
Sbjct: 641 NALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKS 700
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+V +++ G K + E+A VL+E+ + PD + Y + + G +
Sbjct: 701 F--GWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDL 758
Query: 278 FEREVV---LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
E + + + P Y I GL RI EA+EL + ++ DVL
Sbjct: 759 EEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSC----DVL 814
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRV------------PTLSTLSNLSKNLCKRNKSD 382
+I S +D + + M E + P T S L LCK ++D
Sbjct: 815 PNIITYNSFLD---GLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTD 871
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E V+ + A Y ++ +YNV+++ LC + ++ A+ +I+ M KG+ PDV Y+ L+
Sbjct: 872 EACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLV 931
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM-LEKGV 501
+A C+ + A +L M + GC+ N+ T+N +I + + A ++F +M L+ G+
Sbjct: 932 DAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGL 991
Query: 502 APDATTYTSLLEGL 515
APD TY +L++GL
Sbjct: 992 APDKITYCTLIDGL 1005
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 192/457 (42%), Gaps = 49/457 (10%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC-NSLLAVLASDGYIDNALKM 176
D+ + I L + + +A V+N + E + ++ N L+A G + A +
Sbjct: 531 DTYAFNCCINGLSKLGDVSRALQVYNRM-LELELVPDKVTFNILIAGACKAGNFEQASAL 589
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHG 235
F+EM + ++ + FG I C K GQV + D + N + +V+ ++HG
Sbjct: 590 FEEMVAKNLQPDVMTFGALIDGLC---KAGQVEAARDILDLMGNLGVPPNVVTYNALVHG 646
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
CK R+EEA + L+E+ C PD I Y + + ++ + + G P
Sbjct: 647 LCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPD 706
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI----------------G 339
T Y + GL + +A + E +V D N LI G
Sbjct: 707 TVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHG 766
Query: 340 SVSSIDPRSAI-------VFFNFMIEKGRV------------------PTLSTLSNLSKN 374
+SS R + V N + + GR+ P + T ++
Sbjct: 767 DMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDG 826
Query: 375 LCKRNKSDELVEVYKVLSANDY--FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
LCK++ E E+ + L D +++ ++ LC G+ EA V +M G
Sbjct: 827 LCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYV 886
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P+V YN LM C+ D + A + + M G + ++ TY++L+ F + ++ AL L
Sbjct: 887 PNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALEL 946
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
H M +G P+ T+ S+++GLC+ AF++F+
Sbjct: 947 LHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFD 983
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 120/532 (22%), Positives = 230/532 (43%), Gaps = 62/532 (11%)
Query: 51 LVARVINPYLLTHHSLALGFFNWASQQP---------NFTHSP--LSYHSILKSLSLSRQ 99
+VA+ + P ++T +L G + N P ++Y++++ L S +
Sbjct: 593 MVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGR 652
Query: 100 INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS 159
I L+++ + DS Y ++ +L + T A + +E+K D N
Sbjct: 653 IEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNI 712
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ L G + A+ + +EM +G + + I C+ L + + ++ R
Sbjct: 713 LVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRV 772
Query: 220 NSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECK--PDFIAYR----------I 266
+ +V+ ++I+G CK R++EA +++ E+ + C P+ I Y +
Sbjct: 773 SRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSM 832
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+AE +LM S+ + L V+P T + I GL + EA + + +++G
Sbjct: 833 MAEACELMRSL--------RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGG 884
Query: 327 FTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
+ + N L+ + D A M++KG P + T S L CK + DE +
Sbjct: 885 YVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEAL 944
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK-GLDPDVSFYNSLMEA 444
E+ +++ ++ ++N ++ LC S + EA+ + +M K GL PD Y +L++
Sbjct: 945 ELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDG 1004
Query: 445 CCREDLLRPAKKLWDQM-----FASGCS-------GNLK----------------TYNIL 476
R A+ L D M +A C G++ T+NIL
Sbjct: 1005 LFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNIL 1064
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
I+ + G E A LF M+ K + PD T+ +L++GLC+ ++A +++
Sbjct: 1065 IAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 190/445 (42%), Gaps = 28/445 (6%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFD 178
Y + L + T +A + ++ + P+ ++L+ L G ID A +FD
Sbjct: 325 TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 384
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI-----I 233
+M G + I + + C+ K+ + +M++ SM++ V +I +
Sbjct: 385 DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE-------SMVDKGVTPDVITYSVLV 437
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF---KLMGSVFE--REVVLKKKR 288
FCK RV+EA ++L + R C P+ + + + + G F+ ++ LK
Sbjct: 438 DAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKH-- 495
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPR 347
G+ P Y I GL R +A E ++ D N I +S + D
Sbjct: 496 --GLVPDKITYCTLIDGLFRTGRAGQA----EALLDAMPDPDTYAFNCCINGLSKLGDVS 549
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A+ +N M+E VP T + L CK ++ +++ + A + D+ ++ ++
Sbjct: 550 RALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALI 609
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
LC +G++ A ++ M G+ P+V YN+L+ C+ + A + ++M +SGC
Sbjct: 610 DGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCV 669
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
+ TY L+ + AL+L + G PD TY L++GL + + A V
Sbjct: 670 PDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITV 729
Query: 528 FNKSVNHDVMLARSILSTFMISLCR 552
+ V +T + SLC+
Sbjct: 730 LEEMVGKGHHPDVVTYNTLIDSLCK 754
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQ-EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
YN+++ LC +G A + + EM R G+ P + YN+++ C+ + L +L++++
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 242
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G ++ TYN LI + G++E A RL +M + P+ TY+ L+ GLC+ +
Sbjct: 243 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRI 302
Query: 522 QAAFEVFNKSVNHDVMLARSILS--TFMISLCRRVL 555
A E+ + + +I++ +F+ LC++ +
Sbjct: 303 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSM 338
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 181/383 (47%), Gaps = 12/383 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ VL+S G +D ++ EMS G G F C+ + L M++
Sbjct: 44 NALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIE---- 99
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
RE+ ++ +V+ +I G + +EA L +R C P+ + YR + F +
Sbjct: 100 REDFKLD-TVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQL 158
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ ++ G P + + + E+ A +L + + V N
Sbjct: 159 GWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIF 218
Query: 338 IGSVSSID--PRSAIV-----FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
IGS+ + P ++ + M+ V ++N ++ LC K D+ ++ K
Sbjct: 219 IGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKE 278
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ + D +Y+ +++FLC + ++ +A+ + QEMK G+ PDV Y L+++ C+ L
Sbjct: 279 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 338
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ A+ L+++M + GCS + TY LI + + ++ A +FH M++ G P+ TY +
Sbjct: 339 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 398
Query: 511 LLEGLCQETNLQAAFEVFNKSVN 533
L++GLC+ N+ AFEV+ K +
Sbjct: 399 LVDGLCKAGNISKAFEVYAKLIG 421
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/469 (20%), Positives = 198/469 (42%), Gaps = 25/469 (5%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++L +Q+ ++ + + S++ ++ S K+ A+ + N
Sbjct: 143 VTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNR 202
Query: 145 VKFNCEDIGPEICNSLLAV------LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ G + N + L S +D A K++ EM + + F
Sbjct: 203 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARC 262
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C K + ++ E+ ++ + + +I C +VE+AF + E+++
Sbjct: 263 LCGVGKFDKAFQLIKEMMRK--GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 320
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD Y I+ + F G + + + + ++ R +G +P Y I + +++ +A ++
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 380
Query: 319 GEVIVSGKFTIDDDVLNALI------GSVS-----------SIDPRSAIVFFNFMIEKGR 361
+V +D AL+ G++S + D + +F
Sbjct: 381 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 440
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P + T L LCK +K D E+ + ++ + Y+ ++ C +G++ A
Sbjct: 441 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 500
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
V +M + G P V Y SL++ ++ L A K+ QM C+ N+ TY +I
Sbjct: 501 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 560
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+GE E AL+L M EKG +P+ TYT+L++GL + + + ++F +
Sbjct: 561 RIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQ 609
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/479 (20%), Positives = 197/479 (41%), Gaps = 58/479 (12%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS--LLAV 163
++K++ D+S Y +I L +KAF +F E+K + P++ L+
Sbjct: 275 LIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM--VGVTPDVYTYTILIDS 332
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ---VLSMLDEVRKREN 220
G I+ A +F+EM G + + + I + + ++ Q + + + R N
Sbjct: 333 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 392
Query: 221 SMINGSVIAVL----------------------------------------------IIH 234
+ G+++ L ++
Sbjct: 393 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 452
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
G CK +V+ A ++LD + C+P+ I Y + + F G + + V + K G P
Sbjct: 453 GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLP 512
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFF 353
+ Y I + + R+ A ++ ++ T + A+I + I + A+
Sbjct: 513 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLL 572
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
+ M EKG P + T + L L K K D ++++ +S + +Y V+++ LC +
Sbjct: 573 SLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAA 632
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G L +A ++ EMK+ + Y ++ + + + + ++M + G Y
Sbjct: 633 GLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFI--ASLGILEEMESYGTVPIAPVY 690
Query: 474 NILISKFSEVGEIEGALRLFHNMLE--KGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+LI FS+ G +E A+ L M+E V D Y SL++ LC + ++ AF ++++
Sbjct: 691 GMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSE 749
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 90/453 (19%), Positives = 177/453 (39%), Gaps = 66/453 (14%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF-- 142
++Y +++ + ++Q+ + + ++ + Y ++ L + N KAF V+
Sbjct: 359 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 418
Query: 143 ---------NEVKFNCED---IGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFS 188
++ F CED + P + +L+ L +D+A ++ D M G E +
Sbjct: 419 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 478
Query: 189 TIGFGVFIWKFCENAKL-------------GQVLSM---------------LDEVRKREN 220
I + I FC+ K+ G + S+ LD K +
Sbjct: 479 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 538
Query: 221 SMINGS-----VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
M+ S V +I G C+ E+A K+L + + C P+ + Y + + G
Sbjct: 539 QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 598
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVL 334
+ + + + G +P YR I L + +A+ L GE+ K T L
Sbjct: 599 KIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM----KQTYWPKYL 654
Query: 335 NALIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
++ +++ M G VP L K + + +E++K +
Sbjct: 655 QGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMM 714
Query: 393 --ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ TD + Y ++ LC + ++ EA+ + EM R+G P++S + L++
Sbjct: 715 EVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKG------ 768
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
L KK WD+ C G +L+S +++
Sbjct: 769 LVEVKK-WDEALQL-CYGICHEVGLLLSYTTQI 799
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 78/192 (40%), Gaps = 3/192 (1%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P+ T + L + L + D V K +S + + D + LC GR +A
Sbjct: 35 GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+I+ R+ D ++ A +M + C N+ TY L+S
Sbjct: 95 LDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
F + ++ R+ + M+ +G P+ + + SL+ C E + A+++ N+
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211
Query: 540 RSILSTFMISLC 551
+ + F+ S+C
Sbjct: 212 YVVYNIFIGSIC 223
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 203/448 (45%), Gaps = 14/448 (3%)
Query: 110 VKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASD 167
V N + D Y +I L + K ++A K + P++ +++ L +
Sbjct: 2 VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLG--KMVSKGFHPDVYTYTAVIHALCVE 59
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
+ A K +EM++R + + + + V I C+ ++ + +++L ++RK+ + +V
Sbjct: 60 NRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK---CVPTAV 116
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+I G CK +R EA+ +L+E+ C PD Y + F + V ++
Sbjct: 117 TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 176
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSIDP 346
G P Y I GL E R+ EA +L G +I SG + N+LI +
Sbjct: 177 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 236
Query: 347 RS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
A+ M E G P + T + L CK + D+ ++ ++ D+ ++
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTS 296
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK-LWDQMFAS 464
++ LC RL +A ++ EM+RK P V YN++++ CR + L A+K + ++M
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM--- 353
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
C N+ ++NI+I +V A+ L + PD YT++++GLC+E + A
Sbjct: 354 DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEA 413
Query: 525 FEVFNKSVNHDVMLARSI-LSTFMISLC 551
V+ K + L SI ST + LC
Sbjct: 414 CRVYRKMLEEPGCLPNSITYSTLITGLC 441
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 200/452 (44%), Gaps = 12/452 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +++ +L + +++ L+++ +T + Y +I L +G +A ++ +++
Sbjct: 48 TYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM 107
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ C NSL++ L A + +EM + G + I FC++ K
Sbjct: 108 RKKCVPTAVTY-NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKS 166
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RIRECKPDFIAY 264
L + +++ R V +I G CK R++EA + + + C P+ + Y
Sbjct: 167 DDALRVFEQLVAR--GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTY 224
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ F MG + E +L++ + G +P Y + G R+ +A +L +
Sbjct: 225 NSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTR 284
Query: 325 GKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
T D +L+ + + S A+ M K PT+ T + + C+ N+ +E
Sbjct: 285 KGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEE 344
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ +L D ++ S+N+M+ LC R EA +++E +R+ +PDV Y ++++
Sbjct: 345 ARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVID 402
Query: 444 ACCREDLLRPAKKLWDQMFAS-GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
CRE + A +++ +M GC N TY+ LI+ G ++ A +EKG
Sbjct: 403 GLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRA----RGYIEKGCV 458
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
P+ TY L++ + + A E+ + V
Sbjct: 459 PNIGTYNLLIDAFRKANRDEDARELLDDMVQR 490
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 184/428 (42%), Gaps = 47/428 (10%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N T + ++Y ++ L +++ ++L +++ K + Y +I L + + +A
Sbjct: 76 NLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLCKAERASEA 134
Query: 139 FSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+ + E+ ++ P+I +L+ D+AL++F+++ RG + + I
Sbjct: 135 YDLLEEMVYS--GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLI 192
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C+ +L + + + + K + M N +V +I GFC+ +++EA +L+ +
Sbjct: 193 DGLCKEGRLKEAIDLFGRMIKSGSCMPN-TVTYNSLISGFCRMGKMDEAMNLLERMAETG 251
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
PD + Y + F + + + +L + + G+ P + + GL E R+ +A
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311
Query: 317 E-LGEV--------------IVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMI---- 357
LGE+ I+ G + + + A + +D +V FN MI
Sbjct: 312 HILGEMRRKSCSPTVYTYNTILDG-YCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLC 370
Query: 358 ------------EKGRV----PTLSTLSNLSKNLCKRNKSDELVEVY-KVLSANDYFTDM 400
E+ R P + + + LC+ K DE VY K+L +
Sbjct: 371 KVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNS 430
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+Y+ +++ LC +G L A G I+ KG P++ YN L++A + + A++L D
Sbjct: 431 ITYSTLITGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDD 486
Query: 461 MFASGCSG 468
M G G
Sbjct: 487 MVQRGFGG 494
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+++ N D +Y ++ LC RL +A + +M KG PDV Y +++ A C E+
Sbjct: 1 MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
L A+K ++M + N+ TY +LI + G ++ A+ L M +K V P A TY
Sbjct: 61 RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYN 119
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
SL+ GLC+ A+++ + V + +T + C+
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 187/407 (45%), Gaps = 8/407 (1%)
Query: 149 CEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
C P+I C SL+ L G A ++ + + G I + V I +C+ ++G
Sbjct: 138 CRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIG 197
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
L +LD + + + +++ L C +++EA +VLD REC PD I Y I
Sbjct: 198 SALQLLDRMSVSPDVVTYNTILRTL-----CDSGKLKEAMEVLDRQMQRECYPDVITYTI 252
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ E V + +L + R G P Y I G+ E R+ EA + S
Sbjct: 253 LIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYG 312
Query: 327 FTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
+ N ++ S+ S A F MI KG P++ T + L LC++ +
Sbjct: 313 CQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAI 372
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
+V + + + + SYN ++ LC ++ A + M +G PD+ YN+L+ A
Sbjct: 373 DVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTAL 432
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C++ + A ++ +Q+ + GCS L TYN +I S+VG+ + A++L M KG+ PD
Sbjct: 433 CKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDI 492
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
TY++L+ GL +E + A F+ V ++ M+ LC+
Sbjct: 493 ITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCK 539
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 197/457 (43%), Gaps = 16/457 (3%)
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSS------VYRFIIPSLIQGKNTQKAFSVFN 143
I+ SL R + K +V +I DS Y +I + A + +
Sbjct: 145 IIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLD 204
Query: 144 EVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ + P++ N++L L G + A+++ D R I + + I C+
Sbjct: 205 RMS-----VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCK 259
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ +GQ + +LDE+R + V ++I+G CK R++EA + L+ + C+P+
Sbjct: 260 ESGVGQAMKLLDEMRDK--GCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNV 317
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
I + I+ G + E L + + G +P + I L + I A ++ E
Sbjct: 318 ITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEK 377
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ T + N L+ ++ AI + + M+ +G P + T + L LCK K
Sbjct: 378 MPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 437
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
D VE+ L + + +YN ++ L G+ +A ++ EMK KGL PD+ Y++
Sbjct: 438 VDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYST 497
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L+ RE + A + + G N TYN ++ + + A+ M+ +G
Sbjct: 498 LVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARG 557
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
P T+Y L+EGL E + A E+ N+ + V+
Sbjct: 558 CKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVV 594
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 79/154 (51%), Gaps = 6/154 (3%)
Query: 380 KSDELVEVYKVLS---ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
++ EL E +K L D+ + ++ LC +G+ +A V++ ++ G PDV
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN L+ C+ + A +L D+M S ++ TYN ++ + G+++ A+ +
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRMSV---SPDVVTYNTILRTLCDSGKLKEAMEVLDRQ 238
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+++ PD TYT L+E C+E+ + A ++ ++
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKLLDE 272
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 109/267 (40%), Gaps = 24/267 (8%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQI 100
+R SPS+V I L L + + P +P LSY+ +L +L +++
Sbjct: 344 IRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKM 403
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--- 157
L + D Y ++ +L + A + N+ +G + C
Sbjct: 404 ERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ-------LGSKGCSPV 456
Query: 158 ----NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM-- 211
N+++ L+ G D+A+K+ DEM +G++ I + + K+ + ++
Sbjct: 457 LITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFH 516
Query: 212 -LDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
L+E+ + N++ S++ G CK ++ A L + R CKP +Y I+ E
Sbjct: 517 DLEEMGVKPNAITYNSIML-----GLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEG 571
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTN 297
G E +L + GV +++
Sbjct: 572 LAYEGLAKEALELLNELCSRGVVKKSS 598
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
R L K + M G ++ LI + G+ A R+ + + G PD
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181
Query: 507 TYTSLLEGLCQETNLQAAFEVFNK-SVNHDVMLARSILSTF 546
TY L+ G C+ + +A ++ ++ SV+ DV+ +IL T
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTL 222
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 210/451 (46%), Gaps = 11/451 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+ + IL SL ++ + + ++++++ I + +I S + AFSVF +
Sbjct: 50 IKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAK 109
Query: 145 V-KFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ K + P+I +L+ L +G + +L D + +G++ + +G I C
Sbjct: 110 ILKLGYQ---PDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLC- 165
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
K+GQ L +RK E + V+ II G CK K V +AF + E+ + P+
Sbjct: 166 --KIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPN 223
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ Y + F ++G + + +L + V P + + GL E ++ EAK L
Sbjct: 224 VVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVA 283
Query: 321 VIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
V++ D NAL+ G + A FN M + G + + S + L K
Sbjct: 284 VMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMK 343
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
DE +++++ + + D+ +Y+ ++ LC SGR+ A + EM +G P+V Y
Sbjct: 344 MLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYT 403
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
SL++A C+ + A L ++ G N+ TYNIL+ + G + A ++F ++L K
Sbjct: 404 SLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMK 463
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
G D TY+ ++ GLC+E+ A + +K
Sbjct: 464 GHNVDVVTYSIMINGLCKESLFDEALTLLSK 494
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 201/442 (45%), Gaps = 29/442 (6%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
L LG+ QP+ ++Y ++++ L L+ Q+ + ++ I LD Y +
Sbjct: 111 LKLGY------QPDI----ITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTL 160
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC-------NSLLAVLASDGYIDNALKMFD 178
I L + T A + +++ EIC N+++ L D + +A ++
Sbjct: 161 INGLCKIGQTGPALRLLRKIE-------GEICRPDVVMYNTIIDGLCKDKLVRDAFDLYC 213
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFC 237
EM + V + + + I+ FC +L + +L+E+ + +N +V ++ G C
Sbjct: 214 EMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKN---VNPNVCTFNTLVDGLC 270
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K ++ EA ++ + PD Y + + + L+ + + V ++GV +
Sbjct: 271 KEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVH 330
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFM 356
Y I GL + + EA +L E + + D ++LI G S SA+ + + M
Sbjct: 331 SYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEM 390
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
++G+ P + T ++L LCK ++ D+ + + K + +M +YN++V LC GRL
Sbjct: 391 HDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRL 450
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
+A V Q++ KG + DV Y+ ++ C+E L A L +M GC + Y +
Sbjct: 451 TDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETI 510
Query: 477 ISKFSEVGEIEGALRLFHNMLE 498
I+ F E + A +L M++
Sbjct: 511 INAFFEKDMNDKAEKLLREMID 532
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 141/323 (43%), Gaps = 3/323 (0%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I+ K K + + + + ++I I+ + + + V K KLG
Sbjct: 55 ILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLG 114
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
P Y I GL + ++ E+ + +VS +D LI + I +
Sbjct: 115 YQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPAL 174
Query: 352 FFNFMIEKGRV--PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
IE G + P + + + LCK + ++Y + F ++ +Y ++
Sbjct: 175 RLLRKIE-GEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYG 233
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
C G+L +A+G++ EM K ++P+V +N+L++ C+E +R AK L M G +
Sbjct: 234 FCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPD 293
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ TYN L+ + V E A +F+ M + GV D +Y+ ++ GL + L A ++F
Sbjct: 294 VFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFE 353
Query: 530 KSVNHDVMLARSILSTFMISLCR 552
N +V+ S+ + LC+
Sbjct: 354 GMRNENVIPDVVAYSSLIDGLCK 376
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 148/364 (40%), Gaps = 48/364 (13%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I+ +C +++ AF V ++ +PD I Y + L G V E +
Sbjct: 89 ILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQ 148
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVI-----VSGKFTIDDDVL-NALI-GSVSS 343
G+ Y I GL C+ + G + + G+ D V+ N +I G
Sbjct: 149 GIKLDHVSYGTLINGL------CKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKD 202
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
R A + M EK P + T ++L C + D+ + + + ++ ++
Sbjct: 203 KLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTF 262
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N +V LC G++REA ++ M ++G+ PDV YN+LM+ AK +++ M
Sbjct: 263 NTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQ 322
Query: 464 SGCSGNLKTYNILISKFSEV-----------------------------------GEIEG 488
G + ++ +Y+++IS S++ G I
Sbjct: 323 MGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINS 382
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
AL+ M ++G P+ TYTSL++ LC+ + A + K + + + +
Sbjct: 383 ALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVD 442
Query: 549 SLCR 552
LC+
Sbjct: 443 GLCK 446
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 98/204 (48%), Gaps = 4/204 (1%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI FN M+ P + + +L K ++ +++ + + ++ + N++++
Sbjct: 33 AIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILIN 92
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C ++ A+ V ++ + G PD+ Y +L+ C ++ + D++ + G
Sbjct: 93 SYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKL 152
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF--- 525
+ +Y LI+ ++G+ ALRL + + PD Y ++++GLC++ ++ AF
Sbjct: 153 DHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLY 212
Query: 526 -EVFNKSVNHDVMLARSILSTFMI 548
E+F K V +V+ S++ F I
Sbjct: 213 CEMFEKRVFPNVVTYTSLIYGFCI 236
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 181/383 (47%), Gaps = 12/383 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ VL+S G +D ++ EMS G G F C+ + L M++
Sbjct: 44 NALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIE---- 99
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
RE+ ++ +V+ +I G + +EA L +R C P+ + YR + F +
Sbjct: 100 REDFKLD-TVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQL 158
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ ++ G P + + + E+ A +L + + V N
Sbjct: 159 GWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIF 218
Query: 338 IGSVSSID--PRSAIV-----FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
IGS+ + P ++ + M+ V ++N ++ LC K D+ ++ K
Sbjct: 219 IGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKE 278
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ + D +Y+ +++FLC + ++ +A+ + QEMK G+ PDV Y L+++ C+ L
Sbjct: 279 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 338
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ A+ L+++M + GCS + TY LI + + ++ A +FH M++ G P+ TY +
Sbjct: 339 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 398
Query: 511 LLEGLCQETNLQAAFEVFNKSVN 533
L++GLC+ N+ AFEV+ K +
Sbjct: 399 LVDGLCKAGNISKAFEVYAKLIG 421
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/469 (20%), Positives = 198/469 (42%), Gaps = 25/469 (5%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++L +Q+ ++ + + S++ ++ S K+ A+ + N
Sbjct: 143 VTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNR 202
Query: 145 VKFNCEDIGPEICNSLLAV------LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ G + N + L S +D A K++ EM + + F
Sbjct: 203 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARC 262
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C K + ++ E+ ++ + + +I C +VE+AF + E+++
Sbjct: 263 LCGVGKFDKAFQLIKEMMRK--GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 320
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD Y I+ + F G + + + + ++ R +G +P Y I + +++ +A ++
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 380
Query: 319 GEVIVSGKFTIDDDVLNALI------GSVS-----------SIDPRSAIVFFNFMIEKGR 361
+V +D AL+ G++S + D + +F
Sbjct: 381 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 440
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P + T L LCK +K D E+ + ++ + Y+ ++ C +G++ A
Sbjct: 441 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 500
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
V +M + G P V Y SL++ ++ L A K+ QM C+ N+ TY +I
Sbjct: 501 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 560
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+GE E AL+L M EKG +P+ TYT+L++GL + + + ++F +
Sbjct: 561 RIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQ 609
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/479 (20%), Positives = 197/479 (41%), Gaps = 58/479 (12%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS--LLAV 163
++K++ D+S Y +I L +KAF +F E+K + P++ L+
Sbjct: 275 LIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM--VGVTPDVYTYTILIDS 332
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ---VLSMLDEVRKREN 220
G I+ A +F+EM G + + + I + + ++ Q + + + R N
Sbjct: 333 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 392
Query: 221 SMINGSVIAVL----------------------------------------------IIH 234
+ G+++ L ++
Sbjct: 393 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 452
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
G CK +V+ A ++LD + C+P+ I Y + + F G + + V + K G P
Sbjct: 453 GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLP 512
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFF 353
+ Y I + + R+ A ++ ++ T + A+I + I + A+
Sbjct: 513 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLL 572
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
+ M EKG P + T + L L K K D ++++ +S + +Y V+++ LC +
Sbjct: 573 SLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAA 632
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G L +A ++ EMK+ + Y ++ + + + + ++M + G Y
Sbjct: 633 GLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFI--ASLGILEEMESYGTVPIAPVY 690
Query: 474 NILISKFSEVGEIEGALRLFHNMLE--KGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+LI FS+ G +E A+ L M+E V D Y SL++ LC + ++ AF ++++
Sbjct: 691 GMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSE 749
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 83/430 (19%), Positives = 166/430 (38%), Gaps = 65/430 (15%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF-- 142
++Y +++ + ++Q+ + + ++ + Y ++ L + N KAF V+
Sbjct: 359 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 418
Query: 143 ---------NEVKFNCED---IGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFS 188
++ F CED + P + +L+ L +D+A ++ D M G E +
Sbjct: 419 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 478
Query: 189 TIGFGVFIWKFCENAKLGQV-------------------LSMLDEVRKR----------- 218
I + I FC+ K+ S++D + K
Sbjct: 479 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 538
Query: 219 ---ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
++S V +I G C+ E+A K+L + + C P+ + Y + + G
Sbjct: 539 QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 598
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVL 334
+ + + + G +P YR I L + +A+ L GE+ K T L
Sbjct: 599 KIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM----KQTYWPKYL 654
Query: 335 NALIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
++ +++ M G VP L K + + +E++K +
Sbjct: 655 QGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMM 714
Query: 393 --ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ TD + Y ++ LC + ++ EA+ + EM R+G P++S + L++
Sbjct: 715 EVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKG------ 768
Query: 451 LRPAKKLWDQ 460
L KK WD+
Sbjct: 769 LVEVKK-WDE 777
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 78/192 (40%), Gaps = 3/192 (1%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P+ T + L + L + D V K +S + + D + LC GR +A
Sbjct: 35 GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+I+ R+ D ++ A +M + C N+ TY L+S
Sbjct: 95 LDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
F + ++ R+ + M+ +G P+ + + SL+ C E + A+++ N+
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211
Query: 540 RSILSTFMISLC 551
+ + F+ S+C
Sbjct: 212 YVVYNIFIGSIC 223
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 203/448 (45%), Gaps = 14/448 (3%)
Query: 110 VKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASD 167
V N + D Y +I L + K ++A K + P++ +++ L +
Sbjct: 2 VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLG--KMVSKGFHPDVYTYTAVIHALCVE 59
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
+ A K +EM++R + + + + V I C+ ++ + +++L ++RK+ + +V
Sbjct: 60 NRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK---CVPTAV 116
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+I G CK +R EA+ +L+E+ C PD Y + F + V ++
Sbjct: 117 TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 176
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSIDP 346
G P Y I GL E R+ EA +L G +I SG + N+LI +
Sbjct: 177 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 236
Query: 347 RS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
A+ M E G P + T + L CK + D+ ++ ++ D+ ++
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTS 296
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK-LWDQMFAS 464
++ LC RL +A ++ EM+RK P V YN++++ CR + L A+K + ++M
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM--- 353
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
C N+ ++NI+I +V A+ L + PD YT++++GLC+E + A
Sbjct: 354 DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEA 413
Query: 525 FEVFNKSVNHDVMLARSI-LSTFMISLC 551
V+ K + L SI ST + LC
Sbjct: 414 CRVYRKMLEEPGCLPNSITYSTLVTGLC 441
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 203/459 (44%), Gaps = 12/459 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +++ +L + +++ L+++ +T + Y +I L +G +A ++ +++
Sbjct: 48 TYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM 107
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ C NSL++ L A + +EM + G + I FC++ K
Sbjct: 108 RKKCVPTAVTY-NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKS 166
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RIRECKPDFIAY 264
L + +++ R V +I G CK R++EA + + + C P+ + Y
Sbjct: 167 DDALRVFEQLVAR--GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTY 224
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ F MG + E +L++ + G +P Y + G R+ +A +L +
Sbjct: 225 NSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTR 284
Query: 325 GKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
T D +L+ + + S A+ M K PT+ T + + C+ N+ +E
Sbjct: 285 KGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEE 344
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ +L D ++ S+N+M+ LC R EA +++E +R+ +PDV Y ++++
Sbjct: 345 ARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVID 402
Query: 444 ACCREDLLRPAKKLWDQMFAS-GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
CRE + A +++ +M GC N TY+ L++ G ++ A +EKG
Sbjct: 403 GLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRA----RGYIEKGCV 458
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
P+ TY L++ + + A E+ + V + +S
Sbjct: 459 PNIGTYNLLIDAFRKANRDEDARELLDDMVQRGFGVVQS 497
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+++ N D +Y ++ LC RL +A + +M KG PDV Y +++ A C E+
Sbjct: 1 MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
L A+K ++M + N+ TY +LI + G ++ A+ L M +K V P A TY
Sbjct: 61 RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYN 119
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
SL+ GLC+ A+++ + V + +T + C+
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCK 162
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 198/424 (46%), Gaps = 15/424 (3%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLAS--DGYIDNALKMFD 178
+Y +I +L + N A ++ +V F E + P+ +L +D+AL++F+
Sbjct: 217 IYNAVINALCKDGNVADAETIMKKV-FESE-MSPDTFTYTSMILGHCRKHDLDSALQVFN 274
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR----ENSMINGSVIAVLIIH 234
+M+ G E +T+ + I C++ ++ + ++ E+ G +IA+
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL---- 330
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
C E+A+++ +++ + C+P+ Y + + G + + + + GV P
Sbjct: 331 --CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP 388
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFF 353
T Y I L+ RRI A + ++ + + N +I + DP+ A++
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
N M+++G L T + + K C + + + ++ D SY ++ C
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKI 508
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
++ A+G+ EM GL P+ Y +L++ C+++ L A L + M SGC N++TY
Sbjct: 509 SKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTY 568
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
N+LI ++ GA L M+E+G+ P+ TYT++++GLC+ + A E+FNK +
Sbjct: 569 NVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE 628
Query: 534 HDVM 537
+
Sbjct: 629 QGCL 632
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/492 (20%), Positives = 203/492 (41%), Gaps = 42/492 (8%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN L Y++++ +L + ++++K+V ++++ D+ Y +I + +
Sbjct: 212 QPNL----LIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLD 267
Query: 137 KAFSVFNEV-KFNCE--------------DIG--------------------PEICNSLL 161
A VFN++ K CE D G C +
Sbjct: 268 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPI 327
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
L G ++A ++F +M ++G E + + I C + L + + R +
Sbjct: 328 IALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFH--RMSRDG 385
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
+ +V +I+ + +R++ AF VL+ + C P+ + Y + + + ++G +
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
+V+ + G + Y I G A + +++ G D+ LI
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505
Query: 342 SSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
I SA FN M++ G P T + L CK K D + + + + ++
Sbjct: 506 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNV 565
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
++YNV++ L A + + M +G+ P+V Y ++++ C+ A +++++
Sbjct: 566 QTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 625
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M GC NL TY+ LI + G++E A LF + G+ PD TY ++E
Sbjct: 626 MIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK 685
Query: 521 LQAAFEVFNKSV 532
++ AF + +
Sbjct: 686 VEHAFNFLGRMI 697
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 161/367 (43%), Gaps = 15/367 (4%)
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV-IAVLI 232
+ D +S G+ + + ++LG +++D + + + ++ I +
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHL---SRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 221
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV-----VLKKK 287
I+ CK V +A ++ ++ E PD Y + ++G + ++ V +
Sbjct: 222 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSM-----ILGHCRKHDLDSALQVFNQM 276
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSIDP 346
K G P T Y I GL R+ EA +L E+I+ G +I
Sbjct: 277 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A F M KG P + T + L LC + ++ +S + F + +YN +
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 396
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
++ L + R++ A+ V+ M R G P++ YN +++ C + A + + M G
Sbjct: 397 INILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 456
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
S NL TYN +I + + G ALR+ M + G PD +YT L+ G C+ + +++AF
Sbjct: 457 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 516
Query: 527 VFNKSVN 533
+FN+ V+
Sbjct: 517 LFNEMVD 523
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 192/470 (40%), Gaps = 31/470 (6%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +++ L +S + + ++ + + ++ Y +I L++ + + AF V N +
Sbjct: 357 TYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLM 416
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
N P I N ++ G A+ + + M RG + + + I +C++
Sbjct: 417 GRN--GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSG 474
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
L +LD +R S +I GFCK ++E AF + +E+ P+ +
Sbjct: 475 NTTSALRILDLMRDGGCKPDEWSYTE--LICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + + + +L+ ++ G P Y I GL + A+EL +V++
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 592
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+ A+I + S A+ FN MIE+G +P L T S+L + L + K +
Sbjct: 593 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E ++ L + D +Y M+ SG++ A+ + M + G P + Y L+
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712
Query: 443 EACCREDLLRPAK---------------KLWDQMFASGCSGNL---------KTYNILIS 478
+ E LL + + DQ S S L + N L+S
Sbjct: 713 KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 772
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
S G A L +M+ +G+ PD Y SLL L + N+ A VF
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVF 822
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 119/543 (21%), Positives = 210/543 (38%), Gaps = 69/543 (12%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
+A+G F+ S+ F ++ ++Y++++ L +R+I VL + N + + Y +
Sbjct: 373 VAIGLFHRMSRDGVFPNT-VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEM 431
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
I + +KA V N + N+++ G +AL++ D M G
Sbjct: 432 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 491
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
+ + I FC+ +K+ + +E+ ++ + V +I G+CK ++++ A
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMV--DDGLCPNEVTYTALIDGYCKDEKLDTA 549
Query: 246 FKVLDELRIRECKPDFIAYRIV------------AEEF-KLM------------------ 274
+L+ ++ C+P+ Y ++ AEE K+M
Sbjct: 550 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG 609
Query: 275 ----GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTI 329
GS + K + G P Y I L E ++ EA+ L E+ G
Sbjct: 610 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669
Query: 330 DDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL-------------- 375
+ + + + S A F MI+ G PTL T L K L
Sbjct: 670 EITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAAL 729
Query: 376 ------CKRNKSDELVEVYKVLSAN----DYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
C + V+SA D ++ N +VS L T+GR EA ++
Sbjct: 730 PDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGS 789
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M +GL PD YNSL+ + R + A ++ M GC +L Y LI ++
Sbjct: 790 MISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHR 849
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
+ A F NML + PD L++GL ++ E + +M R + +
Sbjct: 850 RKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLH------IMETRRYMPS 903
Query: 546 FMI 548
F I
Sbjct: 904 FHI 906
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 77/150 (51%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y+ ++ L G M +G+ P++ YN+++ A C++ + A+ + ++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
F S S + TY +I +++ AL++F+ M ++G P+ TY++L+ GLC +
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLC 551
AF++ + + H ++ + +I+LC
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALC 331
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 87/455 (19%), Positives = 173/455 (38%), Gaps = 68/455 (14%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A G FN + ++Y +++ +++ S+L+ +K + + Y
Sbjct: 514 AFGLFNEMVDD-GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV-- 570
Query: 127 PSLIQGKNTQKAFSVFNEVKFNC-----EDIGPEICN--SLLAVLASDGYIDNALKMFDE 179
LI G Q FS E+ C E I P + +++ L +G AL+MF++
Sbjct: 571 --LIHGLTKQNNFSGAEEL---CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 625
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M +G + + + I + K+ + ++ E+ + + +I + V +I +
Sbjct: 626 MIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER--HGLIPDEITYVKMIEAYIMS 683
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+VE AF L + C+P Y ++ + K N+Y
Sbjct: 684 GKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLK------------------------NEY 719
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
L+ ++R+ ++ G T D D ++ + ++ +DP ++ N ++
Sbjct: 720 ------LLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS- 772
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE- 418
NL + E E+ + + D E+YN S LC+ R+R
Sbjct: 773 --------------NLSTAGRWFEANELLGSMISQGLCPDQEAYN---SLLCSLLRVRNV 815
Query: 419 --AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
A GV + M +G + ++ Y L+ A C+ + A+ ++ M + + +L
Sbjct: 816 DLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVL 875
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
I G + + H M + P YT L
Sbjct: 876 IDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 52/113 (46%)
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L+++C ++ + D + SG L Y+ L+ S +G + +H ML +G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
V P+ Y +++ LC++ N+ A + K ++ ++ ++ CR+
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 263
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 198/424 (46%), Gaps = 15/424 (3%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLAS--DGYIDNALKMFD 178
+Y +I +L + N A ++ +V F E + P+ +L +D+AL++F+
Sbjct: 217 IYNAVINALCKDGNVADAETIMKKV-FESE-MSPDTFTYTSMILGHCRKHDLDSALQVFN 274
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR----ENSMINGSVIAVLIIH 234
+M+ G E +T+ + I C++ ++ + ++ E+ G +IA+
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL---- 330
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
C E+A+++ +++ + C+P+ Y + + G + + + + GV P
Sbjct: 331 --CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP 388
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFF 353
T Y I L+ RRI A + ++ + + N +I G DP+ A++
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
N M+++G L T + + K C + + + ++ D SY ++ C
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKI 508
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
++ A+G+ EM GL P+ Y +L++ C+++ L A L + M SGC N++TY
Sbjct: 509 SKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTY 568
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
N+LI ++ GA L M+E+G+ P+ TYT++++GLC+ + A E+FNK +
Sbjct: 569 NVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE 628
Query: 534 HDVM 537
+
Sbjct: 629 QGCL 632
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/492 (20%), Positives = 203/492 (41%), Gaps = 42/492 (8%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN L Y++++ +L + ++++K+V ++++ D+ Y +I + +
Sbjct: 212 QPNL----LIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLD 267
Query: 137 KAFSVFNEV-KFNCE--------------DIG--------------------PEICNSLL 161
A VFN++ K CE D G C +
Sbjct: 268 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPI 327
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
L G ++A ++F +M ++G E + + I C + L + + R +
Sbjct: 328 IALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFH--RMSRDG 385
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
+ +V +I+ + +R++ AF VL+ + C P+ + Y + + + ++G +
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
+V+ + G + Y I G A + +++ G D+ LI
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505
Query: 342 SSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
I SA FN M++ G P T + L CK K D + + + + ++
Sbjct: 506 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNV 565
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
++YNV++ L A + + M +G+ P+V Y ++++ C+ A +++++
Sbjct: 566 QTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 625
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M GC NL TY+ LI + G++E A LF + G+ PD TY ++E
Sbjct: 626 MIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK 685
Query: 521 LQAAFEVFNKSV 532
++ AF + +
Sbjct: 686 VEHAFNFLGRMI 697
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 161/367 (43%), Gaps = 15/367 (4%)
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV-IAVLI 232
+ D +S G+ + + ++LG +++D + + + ++ I +
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHL---SRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 221
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV-----VLKKK 287
I+ CK V +A ++ ++ E PD Y + ++G + ++ V +
Sbjct: 222 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSM-----ILGHCRKHDLDSALQVFNQM 276
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSIDP 346
K G P T Y I GL R+ EA +L E+I+ G +I
Sbjct: 277 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A F M KG P + T + L LC + ++ +S + F + +YN +
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 396
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
++ L + R++ A+ V+ M R G P++ YN +++ C + A + + M G
Sbjct: 397 INILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 456
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
S NL TYN +I + + G ALR+ M + G PD +YT L+ G C+ + +++AF
Sbjct: 457 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 516
Query: 527 VFNKSVN 533
+FN+ V+
Sbjct: 517 LFNEMVD 523
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 192/470 (40%), Gaps = 31/470 (6%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +++ L +S + + ++ + + ++ Y +I L++ + + AF V N +
Sbjct: 357 TYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLM 416
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
N P I N ++ G A+ + + M RG + + + I +C++
Sbjct: 417 GRN--GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSG 474
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
L +LD +R S +I GFCK ++E AF + +E+ P+ +
Sbjct: 475 NTTSALRILDLMRDGGCKPDEWSYTE--LICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + + + +L+ ++ G P Y I GL + A+EL +V++
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 592
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+ A+I + S A+ FN MIE+G +P L T S+L + L + K +
Sbjct: 593 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E ++ L + D +Y M+ SG++ A+ + M + G P + Y L+
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712
Query: 443 EACCREDLLRPAK---------------KLWDQMFASGCSGNL---------KTYNILIS 478
+ E LL + + DQ S S L + N L+S
Sbjct: 713 KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 772
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
S G A L +M+ +G+ PD Y SLL L + N+ A VF
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVF 822
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 119/543 (21%), Positives = 210/543 (38%), Gaps = 69/543 (12%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
+A+G F+ S+ F ++ ++Y++++ L +R+I VL + N + + Y +
Sbjct: 373 VAIGLFHRMSRDGVFPNT-VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEM 431
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
I + +KA V N + N+++ G +AL++ D M G
Sbjct: 432 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 491
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
+ + I FC+ +K+ + +E+ ++ + V +I G+CK ++++ A
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMV--DDGLCPNEVTYTALIDGYCKDEKLDTA 549
Query: 246 FKVLDELRIRECKPDFIAYRIV------------AEEF-KLM------------------ 274
+L+ ++ C+P+ Y ++ AEE K+M
Sbjct: 550 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG 609
Query: 275 ----GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTI 329
GS + K + G P Y I L E ++ EA+ L E+ G
Sbjct: 610 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669
Query: 330 DDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL-------------- 375
+ + + + S A F MI+ G PTL T L K L
Sbjct: 670 EITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAAL 729
Query: 376 ------CKRNKSDELVEVYKVLSAN----DYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
C + V+SA D ++ N +VS L T+GR EA ++
Sbjct: 730 PDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGS 789
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M +GL PD YNSL+ + R + A ++ M GC +L Y LI ++
Sbjct: 790 MISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHR 849
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
+ A F NML + PD L++GL ++ E + +M R + +
Sbjct: 850 RKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLH------IMETRRYMPS 903
Query: 546 FMI 548
F I
Sbjct: 904 FHI 906
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 77/150 (51%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y+ ++ L G M +G+ P++ YN+++ A C++ + A+ + ++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
F S S + TY +I +++ AL++F+ M ++G P+ TY++L+ GLC +
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLC 551
AF++ + + H ++ + +I+LC
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALC 331
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 87/455 (19%), Positives = 173/455 (38%), Gaps = 68/455 (14%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A G FN + ++Y +++ +++ S+L+ +K + + Y
Sbjct: 514 AFGLFNEMVDD-GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV-- 570
Query: 127 PSLIQGKNTQKAFSVFNEVKFNC-----EDIGPEICN--SLLAVLASDGYIDNALKMFDE 179
LI G Q FS E+ C E I P + +++ L +G AL+MF++
Sbjct: 571 --LIHGLTKQNNFSGAEEL---CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 625
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M +G + + + I + K+ + ++ E+ + + +I + V +I +
Sbjct: 626 MIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER--HGLIPDEITYVKMIEAYIMS 683
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+VE AF L + C+P Y ++ + K N+Y
Sbjct: 684 GKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLK------------------------NEY 719
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
L+ ++R+ ++ G T D D ++ + ++ +DP ++ N ++
Sbjct: 720 ------LLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALV-- 771
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE- 418
NL + E E+ + + D E+YN S LC+ R+R
Sbjct: 772 -------------SNLSTAGRWFEANELLGSMISQGLCPDQEAYN---SLLCSLLRVRNV 815
Query: 419 --AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
A GV + M +G + ++ Y L+ A C+ + A+ ++ M + + +L
Sbjct: 816 DLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVL 875
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
I G + + H M + P YT L
Sbjct: 876 IDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 52/113 (46%)
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L+++C ++ + D + SG L Y+ L+ S +G + +H ML +G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
V P+ Y +++ LC++ N+ A + K ++ ++ ++ CR+
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 263
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 205/453 (45%), Gaps = 11/453 (2%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S + + L S++ +Q + + S+ Q+ + +T + +I L + + A SV
Sbjct: 91 SVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVL 150
Query: 143 NEV-KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
++ K I P+ N+L+ +G I A+ +F+EM RG + I + I
Sbjct: 151 GKMFKLG---IQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGL 207
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C++ L +L RK E +++A II CK V +A +L E+ R
Sbjct: 208 CKSGNTSMALQLL---RKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIP 264
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD + Y + F +G + E ++ + V P T + + GL E + EA+ +
Sbjct: 265 PDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCV 324
Query: 319 GEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
E + + NAL+ G + A + M++KG P + + + L CK
Sbjct: 325 FEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCK 384
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
R + DE + +S + D +Y+ ++ LC GR +EA + +EM GL PD+
Sbjct: 385 RRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMT 444
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
Y++L++ C+ L A KL M S ++ YNILI G++E A LF +
Sbjct: 445 YSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLF 504
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
G+ P TYT +++GL +E A+E+F K
Sbjct: 505 ADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRK 537
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/458 (22%), Positives = 208/458 (45%), Gaps = 13/458 (2%)
Query: 81 THSPLSYHSILKSLS-LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
TH+ S + ++ L L+ + AI + K K+ I D+ + +I ++A
Sbjct: 124 THNVYSLNILINCLCRLNHVVFAISVLGKMFKLG-IQPDAITFNTLINGRCIEGEIKEAV 182
Query: 140 SVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
+FNE+ P++ + +++ L G AL++ +M +G + + + + I
Sbjct: 183 GLFNEMVRRGHQ--PDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIID 240
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
C++ + + +L E+ R + V I+HGFC + EA + +E+ R
Sbjct: 241 SLCKDTLVNDAMDLLSEMVDR--GIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNV 298
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
P+ + + I+ + G V E V + K G P Y + G + ++ EA++
Sbjct: 299 MPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQK 358
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSS---IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+ +++V N LI +D +++ M EK P T S L +
Sbjct: 359 VLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVE--MSEKELTPDTVTYSTLMQG 416
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LC+ + E + ++K + ++ D+ +Y+ ++ LC G L EA +++ M+ ++PD
Sbjct: 417 LCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPD 476
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+ YN L+E L AK+L+ ++FA G ++TY I+I + G + A LF
Sbjct: 477 IVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFR 536
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
M + G P++ +Y +++G Q + A + ++ V
Sbjct: 537 KMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMV 574
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 182/397 (45%), Gaps = 11/397 (2%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEIC--NSLLAVLASDGYIDNALKMF 177
Y +I L + NT A + ++ E+ G P + +++ L D +++A+ +
Sbjct: 200 YSTVINGLCKSGNTSMALQLLRKM----EEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLL 255
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFC 237
EM RG+ + + + FC L + + +E+ R N M N +V +++ G C
Sbjct: 256 SEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGR-NVMPN-TVTFTILVDGLC 313
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K V EA V + + + +P+ Y + + + L + E + VL G AP +
Sbjct: 314 KEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVH 373
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFM 356
Y I G RR+ EAK L + + T D + L+ + + P+ A+ F M
Sbjct: 374 SYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEM 433
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
G +P L T S L LCK DE +++ K + + D+ YN+++ + +G+L
Sbjct: 434 CSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKL 493
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
A + ++ G+ P + Y +++ +E L A +L+ +M G N +YN++
Sbjct: 494 EVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVI 553
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
I F + + A+RL M+ K + D++T+ LL+
Sbjct: 554 IQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 174/394 (44%), Gaps = 21/394 (5%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
ID+AL F M S + FG F+ + + V+S+ +++ + + +V +
Sbjct: 73 IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQM---DLFGVTHNVYS 129
Query: 230 V-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+ ++I+ C+ V A VL ++ +PD I + + + G + E + +
Sbjct: 130 LNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMV 189
Query: 289 KLGVAPRTNDYREFILGLIVER---------RICEAKELGEVIVSGKFTIDDDVLNALIG 339
+ G P Y I GL R E K +V+ ID + L+
Sbjct: 190 RRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLV- 248
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
A+ + M+++G P + T S + C +E ++ + + +
Sbjct: 249 -------NDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPN 301
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
++ ++V LC G + EA V + M +KG +P+ YN+LM+ C + + A+K+ D
Sbjct: 302 TVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLD 361
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
M GC+ + +YNILI+ + + ++ A L M EK + PD TY++L++GLCQ
Sbjct: 362 IMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVG 421
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
Q A +F + + ++ ST + LC+
Sbjct: 422 RPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKH 455
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 1/221 (0%)
Query: 337 LIGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
+GS++ S +V N M G + +L+ L LC+ N + V +
Sbjct: 98 FLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLG 157
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D ++N +++ C G ++EA G+ EM R+G PDV Y++++ C+ A
Sbjct: 158 IQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMAL 217
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L +M GC NL Y +I + + A+ L M+++G+ PD TY+++L G
Sbjct: 218 QLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGF 277
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
C +L A +FN+ V +VM + + LC+ ++
Sbjct: 278 CSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMV 318
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 168/383 (43%), Gaps = 21/383 (5%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PN ++Y +I+ SL +N +L ++ I D Y I+ +
Sbjct: 229 KPNL----VAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLN 284
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+A +FNE+ ++ P + V L +G + A +F+ M+ +G E + +
Sbjct: 285 EATILFNEMV--GRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNA 342
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-----LIIHGFCKGKRVEEAFKVL 249
+ +C N ++ DE +K + M++ V ++I+G+CK +R++EA +L
Sbjct: 343 LMDGYCLNNQM-------DEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLL 395
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
E+ +E PD + Y + + +G E + K+ G+ P Y + GL
Sbjct: 396 VEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKH 455
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTL 368
+ EA +L + + K D + N LI G + A F+ + G PT+ T
Sbjct: 456 GHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTY 515
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ + K L K SDE E+++ + + + + SYNV++ + A +I EM
Sbjct: 516 TIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVG 575
Query: 429 KGLDPDVSFYNSLMEACCREDLL 451
K D S + L++ R++++
Sbjct: 576 KRFSADSSTFQMLLDLESRDEII 598
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 103/211 (48%), Gaps = 4/211 (1%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
S +SI A+ F M+ P++ ++ K+ + +V + + +
Sbjct: 67 SNNSISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHN 126
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ S N++++ LC + A V+ +M + G+ PD +N+L+ C E ++ A L++
Sbjct: 127 VYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFN 186
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M G ++ +Y+ +I+ + G AL+L M EKG P+ YT++++ LC++T
Sbjct: 187 EMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDT 246
Query: 520 NLQAAF----EVFNKSVNHDVMLARSILSTF 546
+ A E+ ++ + DV+ +IL F
Sbjct: 247 LVNDAMDLLSEMVDRGIPPDVVTYSTILHGF 277
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 198/424 (46%), Gaps = 15/424 (3%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLAS--DGYIDNALKMFD 178
+Y +I +L + N A ++ +V F E + P+ +L +D+AL++F+
Sbjct: 217 IYNAVINALCKDGNVADAETIMKKV-FESE-MSPDTFTYTSMILGHCRKHDLDSALQVFN 274
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR----ENSMINGSVIAVLIIH 234
+M+ G E +T+ + I C++ ++ + ++ E+ G +IA+
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL---- 330
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
C E+A+++ +++ + C+P+ Y + + G + + + + GV P
Sbjct: 331 --CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFP 388
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFF 353
T Y I L+ RRI A + ++ + + N +I G DP+ A++
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
N M+++G L T + + K C + + + ++ D SY ++ C
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKI 508
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
++ A+G+ EM GL P+ Y +L++ C+++ L A L + M SGC N++TY
Sbjct: 509 SKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTY 568
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
N+LI ++ GA L M+E+G+ P+ TYT++++GLC+ + A E+FNK +
Sbjct: 569 NVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE 628
Query: 534 HDVM 537
+
Sbjct: 629 QGCL 632
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/492 (20%), Positives = 203/492 (41%), Gaps = 42/492 (8%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN L Y++++ +L + ++++K+V ++++ D+ Y +I + +
Sbjct: 212 QPNL----LIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLD 267
Query: 137 KAFSVFNEV-KFNCE--------------DIG--------------------PEICNSLL 161
A VFN++ K CE D G C +
Sbjct: 268 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPI 327
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
L G ++A ++F +M ++G E + + I C + L + + R +
Sbjct: 328 IALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFH--RMSRDG 385
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
+ +V +I+ + +R++ AF VL+ + C P+ + Y + + + ++G +
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
+V+ + G + Y I G A + +++ G D+ LI
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505
Query: 342 SSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
I SA FN M++ G P T + L CK K D + + + + ++
Sbjct: 506 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNV 565
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
++YNV++ L A + + M +G+ P+V Y ++++ C+ A +++++
Sbjct: 566 QTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 625
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M GC NL TY+ LI + G++E A LF + G+ PD TY ++E
Sbjct: 626 MIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK 685
Query: 521 LQAAFEVFNKSV 532
++ AF + +
Sbjct: 686 VEHAFNFLGRMI 697
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 161/367 (43%), Gaps = 15/367 (4%)
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV-IAVLI 232
+ D +S G+ + + ++LG +++D + + + ++ I +
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHL---SRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 221
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV-----VLKKK 287
I+ CK V +A ++ ++ E PD Y + ++G + ++ V +
Sbjct: 222 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSM-----ILGHCRKHDLDSALQVFNQM 276
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSIDP 346
K G P T Y I GL R+ EA +L E+I+ G +I
Sbjct: 277 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A F M KG P + T + L LC + ++ +S + F + +YN +
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNAL 396
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
++ L + R++ A+ V+ M R G P++ YN +++ C + A + + M G
Sbjct: 397 INILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 456
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
S NL TYN +I + + G ALR+ M + G PD +YT L+ G C+ + +++AF
Sbjct: 457 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 516
Query: 527 VFNKSVN 533
+FN+ V+
Sbjct: 517 LFNEMVD 523
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 192/470 (40%), Gaps = 31/470 (6%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +++ L +S + + ++ + + ++ Y +I L++ + + AF V N +
Sbjct: 357 TYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLM 416
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
N P I N ++ G A+ + + M RG + + + I +C++
Sbjct: 417 GRN--GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSG 474
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
L +LD +R S +I GFCK ++E AF + +E+ P+ +
Sbjct: 475 NTTSALRILDLMRDGGCKPDEWSYTE--LICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + + + +L+ ++ G P Y I GL + A+EL +V++
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 592
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+ A+I + S A+ FN MIE+G +P L T S+L + L + K +
Sbjct: 593 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E ++ L + D +Y M+ SG++ A+ + M + G P + Y L+
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712
Query: 443 EACCREDLLRPAK---------------KLWDQMFASGCSGNL---------KTYNILIS 478
+ E LL + + DQ S S L + N L+S
Sbjct: 713 KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 772
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
S G A L +M+ +G+ PD Y SLL L + N+ A VF
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVF 822
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 119/543 (21%), Positives = 210/543 (38%), Gaps = 69/543 (12%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
+A+G F+ S+ F ++ ++Y++++ L +R+I VL + N + + Y +
Sbjct: 373 VAIGLFHRMSRDGVFPNT-VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEM 431
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
I + +KA V N + N+++ G +AL++ D M G
Sbjct: 432 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 491
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
+ + I FC+ +K+ + +E+ ++ + V +I G+CK ++++ A
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMV--DDGLCPNEVTYTALIDGYCKDEKLDTA 549
Query: 246 FKVLDELRIRECKPDFIAYRIV------------AEEF-KLM------------------ 274
+L+ ++ C+P+ Y ++ AEE K+M
Sbjct: 550 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG 609
Query: 275 ----GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTI 329
GS + K + G P Y I L E ++ EA+ L E+ G
Sbjct: 610 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669
Query: 330 DDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL-------------- 375
+ + + + S A F MI+ G PTL T L K L
Sbjct: 670 EITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAAL 729
Query: 376 ------CKRNKSDELVEVYKVLSAN----DYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
C + V+SA D ++ N +VS L T+GR EA ++
Sbjct: 730 PDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGS 789
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M +GL PD YNSL+ + R + A ++ M GC +L Y LI ++
Sbjct: 790 MISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHR 849
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
+ A F NML + PD L++GL ++ E + +M R + +
Sbjct: 850 RKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLH------IMETRRYMPS 903
Query: 546 FMI 548
F I
Sbjct: 904 FHI 906
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 77/150 (51%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y+ ++ L G M +G+ P++ YN+++ A C++ + A+ + ++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
F S S + TY +I +++ AL++F+ M ++G P+ TY++L+ GLC +
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLC 551
AF++ + + H ++ + +I+LC
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALC 331
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 87/455 (19%), Positives = 173/455 (38%), Gaps = 68/455 (14%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A G FN + ++Y +++ +++ S+L+ +K + + Y
Sbjct: 514 AFGLFNEMVDD-GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV-- 570
Query: 127 PSLIQGKNTQKAFSVFNEVKFNC-----EDIGPEICN--SLLAVLASDGYIDNALKMFDE 179
LI G Q FS E+ C E I P + +++ L +G AL+MF++
Sbjct: 571 --LIHGLTKQNNFSGAEEL---CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 625
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M +G + + + I + K+ + ++ E+ + + +I + V +I +
Sbjct: 626 MIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER--HGLIPDEITYVKMIEAYIMS 683
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+VE AF L + C+P Y ++ + K N+Y
Sbjct: 684 GKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLK------------------------NEY 719
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
L+ ++R+ ++ G T D D ++ + ++ +DP ++ N ++
Sbjct: 720 ------LLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALV-- 771
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE- 418
NL + E E+ + + D E+YN S LC+ R+R
Sbjct: 772 -------------SNLSTAGRWFEANELLGSMISQGLCPDQEAYN---SLLCSLLRVRNV 815
Query: 419 --AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
A GV + M +G + ++ Y L+ A C+ + A+ ++ M + + +L
Sbjct: 816 DLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVL 875
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
I G + + H M + P YT L
Sbjct: 876 IDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 52/113 (46%)
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L+++C ++ + D + SG L Y+ L+ S +G + +H ML +G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
V P+ Y +++ LC++ N+ A + K ++ ++ ++ CR+
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 263
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 194/401 (48%), Gaps = 11/401 (2%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN +L L G + A + +M+ RG + +GV + +C +L +VL ++DE++
Sbjct: 245 CNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELK 304
Query: 217 KR---ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
+ + I ++I +L CK V EA ++L +R PD + Y V F
Sbjct: 305 GKGLKPDEYIYNNIILLL-----CKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCK 359
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDD 332
+G+V + + R+ + P Y I G+ ++ EA+E+ E++V G D+
Sbjct: 360 LGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKG-LEPDEV 418
Query: 333 VLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
ALI G + + + A N M++KG P + T + L+ LCK + D E+ +
Sbjct: 419 TYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEM 478
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
S ++ +YN +V+ LC G + + +++EM G PD Y +LM+A C+ +
Sbjct: 479 SRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEM 538
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A +L M L T+N+L++ F G +E RL MLEKG+ P+ATT+ SL
Sbjct: 539 AKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSL 598
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++ C + N++A E++ + VM + + + C+
Sbjct: 599 MKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCK 639
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 122/511 (23%), Positives = 226/511 (44%), Gaps = 25/511 (4%)
Query: 47 LSPS-LVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDS 105
PS L+ +IN L + L L FNWA Q S +H L+SL + ++ +
Sbjct: 77 FKPSHLIWVLIN--LKNDYPLVLNLFNWAKSQ-----SQQQFHPTLESLCIVVHLSVASN 129
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK-FNCEDIG--PEICNSLLA 162
++ K V+ F I + K+F +F E+ + +D G P + +
Sbjct: 130 DIQTAK-------RLVFEFCAKPKI---DVSKSFHLFTEMLIYTYKDWGSHPLVFDLYFQ 179
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF-CENAKLGQVLSMLDEVRKRENS 221
VL +G++ A K+F ++ GV S +F+ + C + + + +E E
Sbjct: 180 VLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFP--ELG 237
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
+ +V +++H C+ +V EA +L ++ R PD ++Y +V + +G + +
Sbjct: 238 VCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVL 297
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
++ + + G+ P Y IL L + EA++L + D+ V +I
Sbjct: 298 KLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGF 357
Query: 342 SSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ SA F+ M K VP + T +++ +CK K E E++ + D
Sbjct: 358 CKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDE 417
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+Y ++ C +G ++EA+ V +M +KGL P+V Y +L + C+ + A +L +
Sbjct: 418 VTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHE 477
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M G N+ TYN +++ ++G IE ++L M G PD TYT+L++ C+
Sbjct: 478 MSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGE 537
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+ A E+ +N + + M C
Sbjct: 538 MAKAHELLRIMLNKRLQPTLVTFNVLMNGFC 568
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 176/393 (44%), Gaps = 3/393 (0%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
I N+++ +L +G + A ++ M GV + + I FC+ + + DE+
Sbjct: 314 IYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEM 373
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
R+++ ++ V +IHG CK ++ EA ++ +E+ ++ +PD + Y + + + G
Sbjct: 374 RRKK--IVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAG 431
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ E V + + G+ P Y GL I A EL + + N
Sbjct: 432 EMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYN 491
Query: 336 ALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
++ + I + + M G P T + L CK + + E+ +++
Sbjct: 492 TIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNK 551
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ ++NV+++ C SG L + +I+ M KG+ P+ + +NSLM+ C ++ +R
Sbjct: 552 RLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRAT 611
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+++ M G + TYNILI + ++ A L M+EKG + A TY +L+ G
Sbjct: 612 TEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRG 671
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
+ A ++F + H ++ + I F+
Sbjct: 672 FYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFV 704
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/438 (20%), Positives = 192/438 (43%), Gaps = 7/438 (1%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y++I+ L + ++ + +L+ ++ + D+ VY +I + N A +F+E++
Sbjct: 315 YNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMR 374
Query: 147 FNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ I P+I S++ + G + A +MF+EM +G+E + + I +C+ +
Sbjct: 375 R--KKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGE 432
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ + S+ +++ ++ + V + G CK ++ A ++L E+ + +P+ Y
Sbjct: 433 MKEAFSVHNQMVQK--GLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTY 490
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ +G++ + ++++ G P T Y + + +A EL ++++
Sbjct: 491 NTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLN 550
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ N L+ G S +M+EKG +P +T ++L K C +N
Sbjct: 551 KRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRA 610
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
E+YK + D +YN+++ C + ++EA+ + +EM KG + Y++L+
Sbjct: 611 TTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIR 670
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+ A+KL+++M G Y+I + E G E L L + +
Sbjct: 671 GFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFMTELSGT 730
Query: 504 DATTYTSLLEGLCQETNL 521
Y G E+N
Sbjct: 731 IFVVYICFFIGGSVESNF 748
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/435 (20%), Positives = 182/435 (41%), Gaps = 10/435 (2%)
Query: 99 QINAIDSVLK---QVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
+I +D VLK ++K + D +Y II L + +A + ++ + P+
Sbjct: 289 RIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMR--KWGVFPD 346
Query: 156 --ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
+ ++++ G + A K+FDEM + + + + I C++ K+ + M +
Sbjct: 347 NVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFN 406
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
E+ + + V +I G+CK ++EAF V +++ + P+ + Y +A+
Sbjct: 407 EMLVK--GLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCK 464
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
G + +L + + G+ P Y + GL I + +L E + F D
Sbjct: 465 NGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTIT 524
Query: 334 LNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
L+ + + + A M+ K PTL T + L C ++ + + +
Sbjct: 525 YTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWML 584
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ ++N ++ C +R + + M +G+ PD + YN L++ C+ ++
Sbjct: 585 EKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMK 644
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A L +M G S TY+ LI F + + A +LF M + G+ + Y +
Sbjct: 645 EAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFV 704
Query: 513 EGLCQETNLQAAFEV 527
+ +E N + E+
Sbjct: 705 DVNYEEGNWEITLEL 719
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 10/179 (5%)
Query: 384 LVEVYKVLSANDYFTDMESYNVMVS------FL----CTSGRLREAYGVIQEMKRKGLDP 433
LVE VL A F + Y V+VS FL C ++ A V +E G+
Sbjct: 181 LVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCW 240
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+ N ++ C+ +R A L QM G ++ +Y +++S + +GE++ L+L
Sbjct: 241 NTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLV 300
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ KG+ PD Y +++ LC+ + A ++ V + +T + C+
Sbjct: 301 DELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCK 359
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 179/380 (47%), Gaps = 12/380 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ VLA+ G +D ++ EMS G G F C+ + L M++
Sbjct: 44 NALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVMIE---- 99
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
RE+ ++ +V+ +I G + +EA L +R C P+ + YR + F +
Sbjct: 100 REDFKLD-TVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQL 158
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ ++ K G P + + + R A +L + + N
Sbjct: 159 GWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIF 218
Query: 338 IGSVSSID--PRSAIV-----FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
IGS+ + P ++ + M+ V +N ++ LC K D ++ KV
Sbjct: 219 IGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKV 278
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ + D +Y+ +++FLC + ++ +A+ + QEMK G++PDV Y L+++ C+ L
Sbjct: 279 MMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGL 338
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ A+ +D+M + GCS N+ TY L+ + + ++ A +F+ M++ G P+ TY++
Sbjct: 339 IEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSA 398
Query: 511 LLEGLCQETNLQAAFEVFNK 530
L++GLC+ +Q A EV+ K
Sbjct: 399 LVDGLCKAGEIQKACEVYTK 418
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 112/521 (21%), Positives = 224/521 (42%), Gaps = 26/521 (4%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWASQ------QPNFTHSPLSYHSILKSLSLSRQI 100
L+ S V +N +G F+ A Q F +Y ++ L + ++
Sbjct: 245 LASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKV 304
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSL 160
+ +++K + D Y +I S + ++A S F+E++ +L
Sbjct: 305 EKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTAL 364
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV----- 215
L + A +F+ M G +TI + + C+ ++ + + ++
Sbjct: 365 LHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSD 424
Query: 216 ---------RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
K +S+ V +I G CK +V +A ++LD + C+P+ I Y
Sbjct: 425 NVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDA 484
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ + F +G + + V + K G P + Y I + +RR+ A ++ +V
Sbjct: 485 LIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESS 544
Query: 327 FTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
T + A+I + I + + A+ + M EKG P + T + L L K K D +
Sbjct: 545 CTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSL 604
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
+++ +S + +Y V+++ C +G L EA+ ++ EMK+ + Y S+++
Sbjct: 605 QLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGF 664
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
++ + + L +++ + G Y +LI FS+ G +E AL L M+E + +
Sbjct: 665 SKKFI--ASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNI 722
Query: 506 TT---YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
T+ YTSL++ LC + L+ AFE++++ V+ S+
Sbjct: 723 TSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVF 763
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 98/488 (20%), Positives = 185/488 (37%), Gaps = 94/488 (19%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
S L +++ N + YR ++ ++ K + N + + P + NSL+
Sbjct: 128 SFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSY 187
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG--QVLSMLDEVRKR---E 219
+ A K+ M+ G + + +FI C +L +L++ ++V +
Sbjct: 188 CNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLAS 247
Query: 220 NSMING--------------------SVIAVLIIHGF--------------CKGKRVEEA 245
+ ++N +I V++ GF C+ +VE+A
Sbjct: 248 SCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKA 307
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
F + E++ PD Y I+ + F G + + + R +G + Y +
Sbjct: 308 FLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHA 367
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTL 365
+ +++ +A ++ FN MI+ G P
Sbjct: 368 YLKAKQLPQASDI----------------------------------FNRMIDAGCPPNT 393
Query: 366 STLSNLSKNLCKRNKSDELVEVY-KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
T S L LCK + + EVY K++ +D NV F +
Sbjct: 394 ITYSALVDGLCKAGEIQKACEVYTKLIGTSD--------NVGSDFY------------FE 433
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
+ P+V Y +L++ C+ + A++L D M ++GC N Y+ LI F +VG
Sbjct: 434 GKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVG 493
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILS 544
+I+ A +F M + G P TYTSL++ + ++ L A +V ++ V +
Sbjct: 494 KIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYT 553
Query: 545 TFMISLCR 552
+ LCR
Sbjct: 554 AMIDGLCR 561
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 123/297 (41%), Gaps = 16/297 (5%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
I ++L+ G IDNA ++F MS G + + I ++ +L + +L ++
Sbjct: 481 IYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQM 540
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E+S V +I G C+ ++A K+L + + C P+ + Y + + G
Sbjct: 541 V--ESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSG 598
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE---VIVSGKFTIDDD 332
V + + G AP YR I C A L E ++ K T
Sbjct: 599 KVDLSLQLFIQMSTKGCAPNYVTYRVLI------NHCCAAGLLDEAHSLLSEMKQTYWPK 652
Query: 333 VLNALIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
L V + +++ + G VP L N K + +E +E++K
Sbjct: 653 YLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKE 712
Query: 391 ---LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
LS++ T + Y ++ LC + +L +A+ + E+ RKG+ P++S + L++
Sbjct: 713 MMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKG 769
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 79/192 (41%), Gaps = 3/192 (1%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P+ +T + L + L + D V K +S + + D + LC GR +A
Sbjct: 35 GYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDA 94
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+I+ R+ D ++ L A +M + C N+ TY L++
Sbjct: 95 LVMIE---REDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTG 151
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
F + ++ R+ + M+++G P+ + + SL+ C + A+++ + +
Sbjct: 152 FLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPG 211
Query: 540 RSILSTFMISLC 551
+ F+ S+C
Sbjct: 212 YVAYNIFIGSIC 223
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 218/492 (44%), Gaps = 12/492 (2%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
LA+ FF+WA +Q + H SY+ +L L S V K + + + + ++ +
Sbjct: 9 LAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKIL 68
Query: 126 IPSLIQGKNTQKAFSVFNEV-KFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSH 182
I + +A + +F+ + P+ I N L+ L DG D A+K+F+ M
Sbjct: 69 IRGNCKAGQAMRALEFLRALDEFS---VAPDVYIFNVLIHGLFKDGNPDQAVKLFENMES 125
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRV 242
V+ + + I C++ L + +L+E+ ++ V +I+ F + R+
Sbjct: 126 SRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRI 185
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
EA ++++ PD + I+ G V E +L + G P Y
Sbjct: 186 REACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSI 245
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV--SSIDPRSAIVFFNFMIEKG 360
I L V ++ EA E++ + + D N L+ + + PR A+ M +
Sbjct: 246 IHALCVAGKVVEA---AEILKTMSCSPDLVTFNTLLDGFCKAGMLPR-ALEVLEEMCREN 301
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
+P + T + L LC+ + + + + Y D+ +Y +V LC SG + EA+
Sbjct: 302 ILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAH 361
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+++EM +G V Y+SL+ CR + A+++ +M + L TYNI++
Sbjct: 362 KLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGL 421
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
+ G I A+ L +++ +G PD TY +L++GLC+ ++ A ++ ++ +
Sbjct: 422 IKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPND 481
Query: 541 SILSTFMISLCR 552
L + + LCR
Sbjct: 482 VTLGSVVFGLCR 493
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 214/472 (45%), Gaps = 53/472 (11%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQV--KVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
++Y++++ L S + +L+++ K K D Y +I + + ++A + F
Sbjct: 133 VTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACA-F 191
Query: 143 NEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRG---------------- 184
E K I P++ CN L++ + DG ++ AL++ D M G
Sbjct: 192 RE-KMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALC 250
Query: 185 -----VEFSTI-----------GFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVI 228
VE + I F + FC+ L + L +L+E+ REN ++ +
Sbjct: 251 VAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEM-CREN-ILPDVIT 308
Query: 229 AVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
++++G C+ +V+ AF +L+E+ + PD IAY + + G + E ++K+
Sbjct: 309 YTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMS 368
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKE-LGEVI----VSGKFTIDDDVLNALI--GSV 341
G Y + G + +A+E L E++ V FT + VL LI GS+
Sbjct: 369 VRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNI-VLGGLIKDGSI 427
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
S A+ + ++ +G VP + T + L LCK N+ E ++ +++ F +
Sbjct: 428 SK-----AVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDV 482
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+ +V LC GR+ +A+ ++ EM RK P+V Y SL++ C+ D + A + D M
Sbjct: 483 TLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAM 542
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
G + + Y LI S G + A+ ++ M+ +G PD +T +L E
Sbjct: 543 RGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEE 594
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 155/366 (42%), Gaps = 16/366 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+SI+ +L ++ ++ +LK + + D + ++ + +A V E
Sbjct: 240 ITYNSIIHALCVAGKVVEAAEILKTMSCSP---DLVTFNTLLDGFCKAGMLPRALEVLEE 296
Query: 145 VKFNC-EDIGPEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ C E+I P++ + V L G + A + +E+ +G I + + C+
Sbjct: 297 M---CRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCK 353
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ ++ + ++ E+ R G V+ ++ G+C+ V +A ++L E+ P
Sbjct: 354 SGEIEEAHKLVKEMSVR--GCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPL 411
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
Y IV GS+ + ++ G P Y I GL R+ EA +L +
Sbjct: 412 FTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADE 471
Query: 322 IVS-GKFTIDDDVLNALIG--SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ S G F D + + + G V +D ++V M K P + ++L LCK
Sbjct: 472 MASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVE--MSRKRHAPNVVVYTSLIDGLCKS 529
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
++ D+ V + D +Y ++ + GR+ EA + EM +G PD S
Sbjct: 530 DRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTS 589
Query: 439 NSLMEA 444
+L EA
Sbjct: 590 KTLEEA 595
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 219/488 (44%), Gaps = 55/488 (11%)
Query: 82 HSP--LSYHSILKSLS-LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
H P ++Y +I+ + L ++A++ +L+++ ++I + +Y I+ L + N KA
Sbjct: 41 HQPDAVTYGTIVNGMCKLGDTVSALN-MLRKMDESQIKANVVIYSAIVDRLCKDGNHIKA 99
Query: 139 FSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
++F E+ + I P + N ++ S G +A ++ +M R ++ + F I
Sbjct: 100 QNIFTEMHE--KGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALI 157
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
F + K+ + E+ +R ++ ++ +I GFCK R+E+A + D + +
Sbjct: 158 NAFVKEGKVSGAEELYREMLRR--NIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKG 215
Query: 257 CKPDFI-----------AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
C PD I A R + F +G+V + + ++ GV+P + G
Sbjct: 216 CSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAG 275
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTL 365
L ++ +A E+ +V K +D N +I
Sbjct: 276 LCENGKLEKALEMFKVFQKSKMDLDTATCNIII--------------------------- 308
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
+CK NK DE +++ L N TD+ +YN+++ G A + E
Sbjct: 309 -------NGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLE 361
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M KG+ P YNS+++ C+++ L A+++ D M + GCS ++ T++ LI + + G
Sbjct: 362 MLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGR 421
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
++ L LF M ++G+ D TY +L+ G C+ +L A ++F + V+ V +
Sbjct: 422 VDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRS 481
Query: 546 FMISLCRR 553
+ LC +
Sbjct: 482 MLAGLCTK 489
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 128/308 (41%), Gaps = 45/308 (14%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+++G C+ RV +A ++D + +PD + Y + +G +L+K +
Sbjct: 16 LMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQ 75
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
+ I IV+R + + A
Sbjct: 76 IKANV-----VIYSAIVDRLCKDGNHI-----------------------------KAQN 101
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F M EKG P + T + + C K + ++ + + + D+ +++ +++
Sbjct: 102 IFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFV 161
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
G++ A + +EM R+ + P Y+S+++ C+ L AK ++D M + GCS ++
Sbjct: 162 KEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDII 221
Query: 472 TYNILIS-----------KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
T N LI F +VG + A LF M+ GV+PD T +LL GLC+
Sbjct: 222 TLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGK 281
Query: 521 LQAAFEVF 528
L+ A E+F
Sbjct: 282 LEKALEMF 289
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 98/204 (48%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ + M+E+G P T + +CK + + + + + + ++ Y+ +V
Sbjct: 29 ALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSAIVD 88
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G +A + EM KG+ P+V YN +++ C A++L M
Sbjct: 89 RLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDP 148
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ T++ LI+ F + G++ GA L+ ML + + P TY+S+++G C+ + L+ A +F
Sbjct: 149 DVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMF 208
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
+ V+ L+T + CR
Sbjct: 209 DLMVSKGCSPDIITLNTLIDGCCR 232
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 94/198 (47%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M+E G + T + L LC+ + + + + + + D +Y +V+ +C G
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
A ++++M + +V Y+++++ C++ A+ ++ +M G N+ TYN
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
+I + G+ A +L +M+E+ + PD T+++L+ +E + A E++ + + +
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 536 VMLARSILSTFMISLCRR 553
+ S+ + C+
Sbjct: 181 IFPTTITYSSMIDGFCKH 198
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 197/424 (46%), Gaps = 15/424 (3%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLAS--DGYIDNALKMFD 178
+Y +I +L + N A ++ +V F E + P+ +L +D+AL++F+
Sbjct: 387 IYNAVINALCKDGNVADAETIMKKV-FESE-MSPDTFTYTSMILGHCRKHDLDSALQVFN 444
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR----ENSMINGSVIAVLIIH 234
+M+ G E +T+ + I C++ ++ + ++ E+ G +IA+
Sbjct: 445 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL---- 500
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
C E+A+++ +++ + C+P+ Y + + G + + + + GV P
Sbjct: 501 --CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP 558
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFF 353
T Y I L+ RRI A + ++ + N +I G DP+ A++
Sbjct: 559 NTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVM 618
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
N M+++G L T + + K C + + + ++ D SY ++ C
Sbjct: 619 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKI 678
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
++ A+G+ EM GL P+ Y +L++ C+++ L A L + M SGC N++TY
Sbjct: 679 SKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTY 738
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
N+LI ++ GA L M+E+G+ P+ TYT++++GLC+ + A E+FNK +
Sbjct: 739 NVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE 798
Query: 534 HDVM 537
+
Sbjct: 799 QGCL 802
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 167/382 (43%), Gaps = 16/382 (4%)
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV-IAVLI 232
+ D +S G+ + + ++LG +++D + + + ++ I +
Sbjct: 335 MSFLDMLSQSGLRMGLFAYSALLIHL---SRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 391
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV-----VLKKK 287
I+ CK V +A ++ ++ E PD Y + ++G + ++ V +
Sbjct: 392 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSM-----ILGHCRKHDLDSALQVFNQM 446
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSIDP 346
K G P T Y I GL R+ EA +L E+I+ G +I
Sbjct: 447 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 506
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A F M KG P + T + L LC + ++ +S + F + +YN +
Sbjct: 507 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 566
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
++ L + R++ A+ V+ M R GL ++ YN +++ C + A + + M G
Sbjct: 567 INILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 626
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
S NL TYN +I + + G ALR+ M + G PD +YT L+ G C+ + +++AF
Sbjct: 627 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 686
Query: 527 VFNKSVNHDVMLARSILSTFMI 548
+FN+ V+ D + + T +I
Sbjct: 687 LFNEMVD-DGLCPNEVTYTALI 707
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/492 (20%), Positives = 201/492 (40%), Gaps = 42/492 (8%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN L Y++++ +L + ++++K+V ++++ D+ Y +I + +
Sbjct: 382 QPNL----LIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLD 437
Query: 137 KAFSVFNEV-KFNCE--------------DIG--------------------PEICNSLL 161
A VFN++ K CE D G C +
Sbjct: 438 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPI 497
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
L G ++A ++F +M ++G E + + I C + L + + R +
Sbjct: 498 IALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFH--RMSRDG 555
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
+ +V +I+ + +R++ AF VL+ + + + Y + + + ++G +
Sbjct: 556 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAM 615
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
+V+ + G + Y I G A + +++ G D+ LI
Sbjct: 616 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 675
Query: 342 SSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
I SA FN M++ G P T + L CK K D + + + + ++
Sbjct: 676 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNV 735
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
++YNV++ L A + + M +G+ P+V Y ++++ C+ A +++++
Sbjct: 736 QTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 795
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M GC NL TY+ LI + G++E A LF + G+ PD TY ++E
Sbjct: 796 MIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK 855
Query: 521 LQAAFEVFNKSV 532
++ AF + +
Sbjct: 856 VEHAFNFLGRMI 867
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/492 (21%), Positives = 197/492 (40%), Gaps = 27/492 (5%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +++ L +S + + ++ + + ++ Y +I L++ + + AF V N +
Sbjct: 527 TYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLM 586
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
N N ++ G A+ + + M RG + + + I +C++
Sbjct: 587 GRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNT 646
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
L +LD +R S +I GFCK ++E AF + +E+ P+ + Y
Sbjct: 647 TSALRILDLMRDGGCKPDEWSYTE--LICGFCKISKMESAFGLFNEMVDDGLCPNEVTYT 704
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + + + +L+ ++ G P Y I GL + A+EL +V++
Sbjct: 705 ALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEE 764
Query: 326 KFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ A+I + S A+ FN MIE+G +P L T S+L + L + K +E
Sbjct: 765 GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEA 824
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
++ L + D +Y M+ SG++ A+ + M + G P + Y L++
Sbjct: 825 ENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 884
Query: 445 CCREDLLRPAK---------------KLWDQMFASGCSGNL---------KTYNILISKF 480
E LL + + DQ S S L + N L+S
Sbjct: 885 LKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNL 944
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
S G A L +M+ +G+ PD Y SLL L + N+ A VF +
Sbjct: 945 STAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHL 1004
Query: 541 SILSTFMISLCR 552
+ + +LC+
Sbjct: 1005 NGYKELICALCQ 1016
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 193/456 (42%), Gaps = 10/456 (2%)
Query: 67 ALGFFNWASQQ---PNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
AL FN +++ PN ++Y +++ L S ++N +++++ ++ I +
Sbjct: 439 ALQVFNQMAKEGCEPN----TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT 494
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR 183
I +L + A+ +F ++K + +L++ L G + A+ +F MS
Sbjct: 495 GPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD 554
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
GV +T+ + I EN ++ +L+ + + N + V +I G+C +
Sbjct: 555 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGR--NGLFTNIVTYNEMIKGYCILGDPK 612
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
+A V++ + R + + Y + + + G+ +L R G P Y E I
Sbjct: 613 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 672
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRV 362
G ++ A L +V ++ ALI G +A M G
Sbjct: 673 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 732
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + T + L L K+N E+ KV+ F ++ +Y M+ LC +G A +
Sbjct: 733 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 792
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+M +G P++ Y+SL+ A +E + A+ L+ ++ G + TY +I +
Sbjct: 793 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 852
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
G++E A M++ G P TY L++GL E
Sbjct: 853 SGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 888
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 119/543 (21%), Positives = 210/543 (38%), Gaps = 69/543 (12%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
+A+G F+ S+ F ++ ++Y++++ L +R+I VL + N + + Y +
Sbjct: 543 VAIGLFHRMSRDGVFPNT-VTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEM 601
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
I + +KA V N + N+++ G +AL++ D M G
Sbjct: 602 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 661
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
+ + I FC+ +K+ + +E+ ++ + V +I G+CK ++++ A
Sbjct: 662 KPDEWSYTELICGFCKISKMESAFGLFNEMV--DDGLCPNEVTYTALIDGYCKDEKLDTA 719
Query: 246 FKVLDELRIRECKPDFIAYRIV------------AEEF-KLM------------------ 274
+L+ ++ C+P+ Y ++ AEE K+M
Sbjct: 720 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG 779
Query: 275 ----GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTI 329
GS + K + G P Y I L E ++ EA+ L E+ G
Sbjct: 780 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 839
Query: 330 DDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL-------------- 375
+ + + + S A F MI+ G PTL T L K L
Sbjct: 840 EITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAAL 899
Query: 376 ------CKRNKSDELVEVYKVLSAN----DYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
C + V+SA D ++ N +VS L T+GR EA ++
Sbjct: 900 PDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGS 959
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M +GL PD YNSL+ + R + A ++ M GC +L Y LI ++
Sbjct: 960 MISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHR 1019
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
+ A F NML + PD L++GL ++ E + +M R + +
Sbjct: 1020 RKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLH------IMETRRYMPS 1073
Query: 546 FMI 548
F I
Sbjct: 1074 FHI 1076
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 77/150 (51%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y+ ++ L G M +G+ P++ YN+++ A C++ + A+ + ++
Sbjct: 352 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 411
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
F S S + TY +I +++ AL++F+ M ++G P+ TY++L+ GLC +
Sbjct: 412 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 471
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLC 551
AF++ + + H ++ + +I+LC
Sbjct: 472 NEAFDLIREMILHGILPTAHTCTGPIIALC 501
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 87/455 (19%), Positives = 173/455 (38%), Gaps = 68/455 (14%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A G FN + ++Y +++ +++ S+L+ +K + + Y
Sbjct: 684 AFGLFNEMVDD-GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV-- 740
Query: 127 PSLIQGKNTQKAFSVFNEVKFNC-----EDIGPEICN--SLLAVLASDGYIDNALKMFDE 179
LI G Q FS E+ C E I P + +++ L +G AL+MF++
Sbjct: 741 --LIHGLTKQNNFSGAEEL---CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 795
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M +G + + + I + K+ + ++ E+ + + +I + V +I +
Sbjct: 796 MIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER--HGLIPDEITYVKMIEAYIMS 853
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+VE AF L + C+P Y ++ + K N+Y
Sbjct: 854 GKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLK------------------------NEY 889
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
L+ ++R+ ++ G T D D ++ + ++ +DP ++ N ++
Sbjct: 890 ------LLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALV-- 941
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE- 418
NL + E E+ + + D E+YN S LC+ R+R
Sbjct: 942 -------------SNLSTAGRWFEANELLGSMISQGLCPDQEAYN---SLLCSLLRVRNV 985
Query: 419 --AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
A GV + M +G + ++ Y L+ A C+ + A+ ++ M + + +L
Sbjct: 986 DLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVL 1045
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
I G + + H M + P YT L
Sbjct: 1046 IDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 1080
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 52/113 (46%)
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L+++C ++ + D + SG L Y+ L+ S +G + +H ML +G
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
V P+ Y +++ LC++ N+ A + K ++ ++ ++ CR+
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 433
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/522 (22%), Positives = 212/522 (40%), Gaps = 76/522 (14%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
+LAL +F + +F H+PL+Y +++ L+ R+++ + +L+Q+K+ I+ ++
Sbjct: 57 TLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFIS 116
Query: 125 IIPSLIQGKNTQKA-------------------------------FSVFNEVKFNCEDIG 153
+I S + ++++A F + N + N + G
Sbjct: 117 VIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDG 176
Query: 154 PE----ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
E N LL L + +D A K+ EMS +G + + + I C KLG+V
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLC---KLGKV- 232
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
E R+ S + +I+G CK EEAF++LDE+ + P+ I+Y +
Sbjct: 233 ---KEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIIN 289
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
G+V VL K G +P + + I G ++
Sbjct: 290 ALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKG------------------- 330
Query: 330 DDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
GS ++D F++ MI +G VP + + L LC + + V V+
Sbjct: 331 ---------GSHEALD------FWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFN 375
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+ N ++ +Y+ ++ +G L A V M G P+V Y +++ CR
Sbjct: 376 QMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNS 435
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
+ A L + M C N T+N I G ++ A+++F M G P+ TTY
Sbjct: 436 MFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYN 495
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
LL+ L ++ AF + + + L +T + C
Sbjct: 496 ELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYC 537
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 5/201 (2%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
++ M + G P + T + L K LCK N+ D ++ +S+ D SY ++S LC
Sbjct: 169 YSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCK 228
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G+++EA +E+ P V YN+L+ C+E A +L D+M G N+ +
Sbjct: 229 LGKVKEA----RELAMS-FTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVIS 283
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
Y +I+ S+ G +E +L + M +G +P+ T+TSL++G + A + +++ +
Sbjct: 284 YTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMI 343
Query: 533 NHDVMLARSILSTFMISLCRR 553
V+ + M LC +
Sbjct: 344 REGVVPNVVAYNALMHGLCSK 364
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 96/236 (40%), Gaps = 9/236 (3%)
Query: 71 FNWA---SQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
+NW PN ++Y ++ L + N +++ ++V ++ + I
Sbjct: 409 WNWMITHGCHPNV----VAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIK 464
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
L A VF+++ + N LL L D A + +M HRG+E
Sbjct: 465 GLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIEL 524
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
+ + + I+ +C LG+ L +L ++ R ++ ++I +CK +V A +
Sbjct: 525 NLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTK--PDAITVNIVIDAYCKQGKVNIAIQ 582
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
++D L + PD IAY + V E V L++ G++P + +
Sbjct: 583 LMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/202 (18%), Positives = 90/202 (44%), Gaps = 5/202 (2%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
Q N + +++++ +K L S +++ V Q+ + +++ Y ++ SL++ +
Sbjct: 448 QVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRF 507
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
+AF + +++ ++ N+++ G + AL++ +M RG + I +
Sbjct: 508 GEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIV 567
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-IIHGFCKGKRVEEAFKVLDELRI 254
I +C+ K+ + ++D + + + +IA +I G C VEEA L +
Sbjct: 568 IDAYCKQGKVNIAIQLMDRLSAGK---WHPDIIAYTSLISGICTHIGVEEAIVYLRRMLS 624
Query: 255 RECKPDFIAYRIVAEE-FKLMG 275
P+ + ++ F MG
Sbjct: 625 EGISPNVATWNVLVRHLFSNMG 646
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 204/459 (44%), Gaps = 8/459 (1%)
Query: 82 HSPLS---YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
H P S + +L S++ + + + S+ Q+ + + +I S A
Sbjct: 60 HPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFA 119
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
FSV ++ P +L+ L +G I AL +FD+M G + + + +G I
Sbjct: 120 FSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLING 179
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSV-IAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
C K+G + + +R E V I II CK ++V EAF + ++ +
Sbjct: 180 LC---KVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGI 236
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
PD Y + + +L + + P + + L E ++ EA E
Sbjct: 237 SPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHE 296
Query: 318 LGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+ ++++ D L+ G + A+ F+ M+ KG P + + + L C
Sbjct: 297 IVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYC 356
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K +K D+ + +++ + ++ D ++YN ++ LC GRL++A + EM +G PD+
Sbjct: 357 KIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLV 416
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
Y+ L+++ C+ L A L + AS + +++ YNI+I GE+E A LF N+
Sbjct: 417 TYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNL 476
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
KG+ P TY ++ GLC+ L A ++F + +D
Sbjct: 477 SSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGND 515
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 197/440 (44%), Gaps = 23/440 (5%)
Query: 75 SQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN 134
QP+ P ++ ++++ L + +I + ++ + Y +I L + N
Sbjct: 130 GHQPD----PTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGN 185
Query: 135 TQKAFSVFNEV-KFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
T A + + + NC+ P+ I S++ L D + A +F +M +G+
Sbjct: 186 TSAAIRLLRSMEQGNCQ---PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLII-----HGFCKGKRVEEAF 246
+ + C + V ++L N M+N ++ ++I CK +V EA
Sbjct: 243 YTSLVHALCNLCEWKHVTTLL-------NQMVNSKILPDVVIFSTVVDALCKEGKVTEAH 295
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
+++D + R +PD + Y + + L + E V + G AP Y I G
Sbjct: 296 EIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGY 355
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTL 365
+I +A L E + ++ D N L+ + + + AI F+ M+ +G++P L
Sbjct: 356 CKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDL 415
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
T S L +LCK +E + + K + A++ D++ YN+++ +C +G L A +
Sbjct: 416 VTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSN 475
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
+ KGL P V YN ++ C+ LL A KL+ +M + CS + TYN + F + E
Sbjct: 476 LSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNE 535
Query: 486 IEGALRLFHNMLEKGVAPDA 505
A++L ML +G + D+
Sbjct: 536 TLRAIQLLEEMLARGFSADS 555
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 173/385 (44%), Gaps = 5/385 (1%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D+AL F+ + H S + F + + VLS+ ++ ++ + +V
Sbjct: 46 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQM---DSFGVPPNVYT 102
Query: 230 V-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+ ++I+ FC RV AF VL ++ +PD + + + G + E + K
Sbjct: 103 LNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 162
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPR 347
G P Y I GL A L + G D + ++I S+
Sbjct: 163 DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVT 222
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A F+ M+ +G P + T ++L LC + + + + + D+ ++ +V
Sbjct: 223 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 282
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
LC G++ EA+ ++ M ++G++PDV Y +LM+ C + + A K++D M G +
Sbjct: 283 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 342
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
++ +Y LI+ + ++ +I+ A+ LF M K PD TY +L+ GLC LQ A +
Sbjct: 343 PDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIAL 402
Query: 528 FNKSVNHDVMLARSILSTFMISLCR 552
F++ V M S + SLC+
Sbjct: 403 FHEMVARGQMPDLVTYSILLDSLCK 427
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 163/377 (43%), Gaps = 10/377 (2%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
+Q N + Y SI+ SL RQ+ ++ Q+ I+ D Y ++ +L
Sbjct: 197 EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEW 256
Query: 136 QKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
+ ++ N++ + I P++ ++++ L +G + A ++ D M RGVE + +
Sbjct: 257 KHVTTLLNQMVNS--KILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYT 314
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
+ C +++ + + + D + ++ + +I+G+CK ++++A + +E+
Sbjct: 315 TLMDGHCLQSEMDEAVKVFDMMVRK--GFAPDVISYTTLINGYCKIHKIDKAMYLFEEMC 372
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+E PD Y + +G + + + + G P Y + L R +
Sbjct: 373 RKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLE 432
Query: 314 EAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
EA L + I + D V N +I G + + +A F+ + KG P++ T + +
Sbjct: 433 EAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMI 492
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
LCKR +E +++ + ND D +YN + + A +++EM +G
Sbjct: 493 HGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFS 552
Query: 433 PDVSFYNSLMEACCRED 449
D F LM + ED
Sbjct: 553 ADSCF---LMLSVLSED 566
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 192/425 (45%), Gaps = 22/425 (5%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS--LLAVLASDGYIDNALKMFDE 179
Y +I L Q +A +F K N ++ P+ + L+ LA G +++A +F +
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFE--KMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQK 348
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
+ H GV ST+ + I C + ++ +R V ++I CK
Sbjct: 349 LLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRR--GCPPSPVTYNVMIDASCKR 406
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+EEA ++ ++ PD + Y V + V E ++ + +LG P +
Sbjct: 407 GMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSH 466
Query: 300 REFILGLIVERRI---CEAKELGEVIVSGKFTIDD----DVL--NALIGSVSSI----DP 346
ILGL + +I C+ +L E K DD DV+ + LI + SI D
Sbjct: 467 NTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 526
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
R M+++ PT+ T + L LCK + E EV + ++ D+ +YN +
Sbjct: 527 RH---LLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL 583
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
V C +G+ A ++ +M +GL P+V Y +L+ C+ + L A ++ QM +SGC
Sbjct: 584 VHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC 643
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ NL TY LI F G+++G L+LF M+ G++PD Y +L LC+ A E
Sbjct: 644 APNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALE 703
Query: 527 VFNKS 531
+ +
Sbjct: 704 ILREG 708
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 215/477 (45%), Gaps = 45/477 (9%)
Query: 82 HSPLS--YHSILKSLSLSRQINAIDSVLKQVKVNKITL-DSSVYRFIIPSLIQGKNTQKA 138
HSP Y+ ++ SLS ++ A+ ++ QV V++ DS + I+ L + +A
Sbjct: 40 HSPYPDVYNVLIDSLSKRQETEAVKKMV-QVMVDRGCFPDSFTFTTILCGLCKAGKMDEA 98
Query: 139 FSVFNEVKFNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
V +E++ I P S L L G ++ A ++ + M ++ + + +
Sbjct: 99 ELVMDEMRSRM--IPPYFATSSFLAHELCLRGSMERAFQLLEIMPVA----NSSAYNIVV 152
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C+ A++ L + + ++ + GS+ +VL+ G R++EA +V E R RE
Sbjct: 153 VALCKAARVDDALELARTMSEKRIPLAAGSLDSVLV--GLMDSGRIDEALQVYRENR-RE 209
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
P + ++ E F G V + +L+ AP Y + GL C+A
Sbjct: 210 --PCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGL------CKAG 261
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+ E + + D ++ ++ S S R +N +I LC
Sbjct: 262 RVEEAV---RLFGDRELPSSSSSSSSPPSLRG----YNIVI---------------LGLC 299
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+ ++ DE V++++ ++ + D SY +++ L +G+L +A + Q++ G+ P
Sbjct: 300 QNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTV 359
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
Y SL+ C + A++L+ M GC + TYN++I + G +E A L M
Sbjct: 360 AYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKM 419
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+E G PD TY ++++GLC+ + ++ A +FN+ R +T ++ LC++
Sbjct: 420 IEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQ 476
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 195/479 (40%), Gaps = 49/479 (10%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
Y+ ++ L + +I+ + +++ ++ DS Y +I L + A ++F ++
Sbjct: 290 GYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKL 349
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ SL+ L D+A ++F +M+ RG S + + V I C+ L
Sbjct: 350 LHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGML 409
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ ++ ++ E+ + V ++ G CK RVEEA + +E+ C P+ ++
Sbjct: 410 EEACDLIKKMI--EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHN 467
Query: 266 IV----AEEFKL-----MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
+ ++ K+ G + E +LK+ G P Y I GL R+ +A+
Sbjct: 468 TIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 527
Query: 317 ELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
L E +V + N LI G + + A + M+ G+ P + T + L
Sbjct: 528 HLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGH 587
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C+ +++ E+ + A ++ +Y +VS LC + RL EA GV +MK G P++
Sbjct: 588 CRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNL 647
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS-------------- 481
Y +L+ C + KL+ +M +G S + Y L ++
Sbjct: 648 FTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE 707
Query: 482 -----------------------EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
E G++E AL +M+ G P SL+ GLC+
Sbjct: 708 GRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCK 766
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 150/393 (38%), Gaps = 53/393 (13%)
Query: 83 SPLSYHSILKSLSLSRQI--NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
SP++Y+ ++ + S R + A D + K ++ + D Y ++ L + ++A
Sbjct: 392 SPVTYNVMIDA-SCKRGMLEEACDLIKKMIEDGHVP-DVVTYNTVMDGLCKSSRVEEALL 449
Query: 141 VFNEV-KFNC-------EDIGPEICN-SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+FNE+ + C I +C S + G +D A ++ M+ G +
Sbjct: 450 LFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVT 509
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ I C A++ +L+++ KR+ V +IHG CK R++EA +VLD
Sbjct: 510 YSTLISGLCSIARVDDARHLLEDMVKRQCKPT--VVTQNTLIHGLCKAGRIKEAREVLDA 567
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ PD + Y + G +L G+AP Y + GL R
Sbjct: 568 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 627
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
+ EA + + S + ALI G S+ + F M+ G P
Sbjct: 628 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 687
Query: 371 LSKNLCKRNKS----------------------------DELVEVYKVLSANDYFTDM-- 400
L+ LCK +S D L+E K+ A + DM
Sbjct: 688 LAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVR 747
Query: 401 -------ESYNVMVSFLCTSGRLREAYGVIQEM 426
E +V+ LC SG+ EA V++E+
Sbjct: 748 GGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 780
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 91/195 (46%), Gaps = 5/195 (2%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F+ M E+ P + L +L KR +++ + ++ +V+ F D ++ ++
Sbjct: 29 AVKIFSLM-EECHSPYPDVYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILC 87
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC +G++ EA V+ EM+ + + P + + L C + A +L + M +
Sbjct: 88 GLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVA---- 143
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N YNI++ + ++ AL L M EK + A + S+L GL + A +V+
Sbjct: 144 NSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVY 203
Query: 529 NKSVNHDVMLARSIL 543
++ ++ ++L
Sbjct: 204 RENRREPCLVTLNVL 218
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/502 (23%), Positives = 229/502 (45%), Gaps = 24/502 (4%)
Query: 44 RDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAI 103
R+ L+ S+V V+ + L + FF WA +Q + H+ Y ++ + L
Sbjct: 96 REFLTDSVVVAVLGA--VRSPELCVRFFLWAERQVGYKHTGACYDALAEVLGFEDPARTA 153
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEIC--NS 159
+ +L+++ + D V ++ L++ Q + E +D G P N+
Sbjct: 154 ERLLREIGED----DRDVLGRLLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNA 209
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ VLAS G ++ A ++ EMS G G F C+ + G L +L+ RE
Sbjct: 210 LVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDLLE----RE 265
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+ ++ +V+ +I G + EA L +R P+ + YR + F +
Sbjct: 266 DFKLD-TVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGW 324
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+ ++ G P + + + A +L + + V N IG
Sbjct: 325 CKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIG 384
Query: 340 SVSSID--PRSAI------VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
S+ + P + V+ ++ + ++T +N ++ LC K ++ ++ K +
Sbjct: 385 SICGREELPNPELLDLAEKVYEEMLVASCVLNKINT-ANFARCLCGVGKFEKAFQIVKEM 443
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+ D +Y +++FLC + R+ +A+ + QEMK+ G++PDV Y L+++ C+ L+
Sbjct: 444 MRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLI 503
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A+ +D+M ++GCS N+ TY L+ + + ++ A +FH M+ P+A TY++L
Sbjct: 504 EQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSAL 563
Query: 512 LEGLCQETNLQAAFEVFNKSVN 533
++GLC+ +Q A EV+ K +
Sbjct: 564 IDGLCKAGEIQKACEVYAKLIG 585
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/470 (20%), Positives = 191/470 (40%), Gaps = 31/470 (6%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++L +Q+ ++ + S++ ++ + ++ A+ +FN
Sbjct: 307 VTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNR 366
Query: 145 VKFNCEDIGPEICNSLLAV------LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ G + N + L + +D A K+++EM + I F
Sbjct: 367 MNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARC 426
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C K + ++ E+ ++ + + +I C+ KRV++AF + E++
Sbjct: 427 LCGVGKFEKAFQIVKEMMRK--GFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVN 484
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD Y I+ + F G + + + + R G +P Y + + +++ +A ++
Sbjct: 485 PDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDI 544
Query: 319 GEVIV--------------------SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIE 358
+V +G+ +V LIG+ +I+ + +F
Sbjct: 545 FHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIE---SDFYFEGKDT 601
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
P + T L LCK K + ++ + A + Y+ +V C G +
Sbjct: 602 DTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDS 661
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A V M + G P V Y SL++ ++ L A K+ QM C+ N+ TY ++
Sbjct: 662 AQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVD 721
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ GE E AL L M +KG +P+ TYT+L++GL + + A E+F
Sbjct: 722 GLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELF 771
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 145/371 (39%), Gaps = 21/371 (5%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L G + A ++ EM +G + I C+ ++ + + E++K +
Sbjct: 427 LCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKK---VGV 483
Query: 224 NGSVIA-VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
N V ++I FCK +E+A DE+R C P+ + Y + + +++
Sbjct: 484 NPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQAND 543
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD---------- 332
+ + P Y I GL I +A E+ ++ I+ D
Sbjct: 544 IFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDT 603
Query: 333 ------VLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
AL+ + S A + M+ G P L CK + D
Sbjct: 604 ISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQ 663
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
EV+ ++ Y + +Y ++ + GRL A V+ +M + +P+V Y ++++
Sbjct: 664 EVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGL 723
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+ A L M GCS N+ TY LI + G+++ L LF M KG AP+
Sbjct: 724 CKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNY 783
Query: 506 TTYTSLLEGLC 516
TY L+ C
Sbjct: 784 VTYRILINHCC 794
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 168/386 (43%), Gaps = 34/386 (8%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS--LLAV 163
++K++ D+S Y +I L Q K KAF +F E+K + P++ L+
Sbjct: 439 IVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKK--VGVNPDVYTYTILIDS 496
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
G I+ A FDEM G + + + + + ++ +L Q + R ++
Sbjct: 497 FCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFH--RMVGDACY 554
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV--FERE 281
++ +I G CK +++A +V KL+G+ E +
Sbjct: 555 PNAITYSALIDGLCKAGEIQKACEVYA---------------------KLIGTSDNIESD 593
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS- 340
+ K ++P Y + GL +++ +A +L + +++ + V +AL+
Sbjct: 594 FYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGF 653
Query: 341 --VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
V ID SA F M + G +P++ T ++L + K + D ++V + +
Sbjct: 654 CKVGEID--SAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNP 711
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
++ +Y MV LC +G +A ++ M++KG P+V Y +L++ + + +L+
Sbjct: 712 NVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELF 771
Query: 459 DQMFASGCSGNLKTYNILISKFSEVG 484
QM GC+ N TY ILI+ G
Sbjct: 772 MQMKTKGCAPNYVTYRILINHCCAAG 797
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 118/287 (41%), Gaps = 35/287 (12%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
SL+ + DG +D A+K+ +M + + + + C+ + + L++L + K
Sbjct: 682 TSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEK 741
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ S V +I G K +V+ ++ +++ + C P+++ YRI+ G +
Sbjct: 742 KGCS--PNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLL 799
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ ++L + ++ YR + G +R + L E + S V L
Sbjct: 800 DDAHLLLDEMKQTHWPKYLQGYRTTVQGF--SKRFLASLGLLEEMESHDTAPIAPVYGML 857
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
I S S + GR+ T L E++EV L+
Sbjct: 858 IDSFS---------------KAGRLETALELHK------------EMMEVSSSLN----M 886
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+ + ++ LC S ++ EA + EM+R+G+ PD+S + L++
Sbjct: 887 ASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKG 933
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 1/146 (0%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y+ + L R A +++E+ D N L+ CC + L A + ++
Sbjct: 137 YDALAEVLGFEDPARTAERLLREIGEDDRDVLGRLLNVLVRRCCLQGLWGEALEELGRLK 196
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G + TYN L+ + G++E A R+ M G D +T S + LC+E
Sbjct: 197 DFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWG 256
Query: 523 AAFEVFNK-SVNHDVMLARSILSTFM 547
A ++ + D +L ++S M
Sbjct: 257 DALDLLEREDFKLDTVLCTQMISGLM 282
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 134/571 (23%), Positives = 242/571 (42%), Gaps = 75/571 (13%)
Query: 28 RKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSY 87
RKW + + L +L + L+P LV V+ H LA FF WA QQ ++H+ +Y
Sbjct: 130 RKWDAEMGKQLERLKFK--LNPGLVCDVVVNQKDLH--LAKCFFTWAGQQDGYSHTVGTY 185
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK- 146
++K L+ +++ +A+ +L + + + ++ + N A +FN++K
Sbjct: 186 TLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKS 245
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
F C + + N +L +L G+ +A+ +F ++ ++ F +F+ F + +L
Sbjct: 246 FGC-NPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLD 304
Query: 207 QVL----------------------------SMLDEVRKRENSMIN-----GSVIAVLII 233
+DE K N M N V ++
Sbjct: 305 PAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLV 364
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
+G K R+EEA +V E++ C PD IAY + + G + K+ + G+
Sbjct: 365 NGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLV 424
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---GSVSSIDPRSAI 350
P Y I L R EA +L + D N LI G +D AI
Sbjct: 425 PNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAI 484
Query: 351 VFFNFMIEKG------------------------RVPTLS-------TLSNLSKNLCKRN 379
+ M+EKG P+L T + L
Sbjct: 485 I--KEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNG 542
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
DE V++ +V+ ++ + +Y +V L +GRL EA +++EM+++G +P V Y+
Sbjct: 543 HVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYS 602
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
SLM + + D + L+D+M GC ++ TY+++I+ + +++ AL +F M E+
Sbjct: 603 SLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEE 662
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
G+ P Y +LL L ++ + A ++FN+
Sbjct: 663 GMEPLLGNYKTLLSSLVKDEKIDFALQIFNE 693
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 196/435 (45%), Gaps = 21/435 (4%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S ++Y S++ S Q S+ ++ D S Y +I L + + +A VF
Sbjct: 597 SVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVF 656
Query: 143 NEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+K E + P + N +LL+ L D ID AL++F+E+ + T + + +
Sbjct: 657 GRMKE--EGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLV 714
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVL-----IIHGFCKGKRVEEAFKVLDELRIR 255
++ ++ DE K +SM N +++ L ++ G K R+EEAF + ++
Sbjct: 715 KSNRV-------DEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEE 767
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
+PD +AY + + G + ++ + K P Y I L E R+ EA
Sbjct: 768 GHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEA 827
Query: 316 KELGEVIVSGKFTIDDDVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
E +S T + V ++LI G +D A+ F M + P + T +NL
Sbjct: 828 YYFFENSISKGCTPNVGVYSSLIDSFGKKGMVD--RALELFEEMQRRQCPPNIVTYNNLL 885
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
L K + + ++ + + D+ +YN+++ + G + EA + MK KG+
Sbjct: 886 SGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIV 945
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
PDV + SL+E+ + D L A +L+D M G + ++ TYN+LI G++ A +
Sbjct: 946 PDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMI 1005
Query: 493 FHNMLEKGVAPDATT 507
FH M KG PD T
Sbjct: 1006 FHEMKVKGCMPDGIT 1020
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 114/522 (21%), Positives = 218/522 (41%), Gaps = 35/522 (6%)
Query: 67 ALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
A FFN N SP ++Y +++ L+ + ++ V ++K N + D+ Y
Sbjct: 341 ACKFFNGMK---NLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNT 397
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
+I L + A +F E+K N +++VL G A ++F ++ +G
Sbjct: 398 LIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQG 457
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDE-VRKRENSMIN------------------- 224
+ I + ++ +VL+++ E V K +I+
Sbjct: 458 AVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVE 517
Query: 225 ---------GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
G + ++ F V+EA K+L+ ++ EC P + Y + + G
Sbjct: 518 YPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAG 577
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ E +L++ K G P Y + + E+ L + +V D +
Sbjct: 578 RLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYS 637
Query: 336 ALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I + S D A+ F M E+G P L L +L K K D ++++ L +
Sbjct: 638 LVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQES 697
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D YN+MV+ L S R+ EA ++ MK + + PD+ Y SL++ + L A
Sbjct: 698 SLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEA 757
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++ +M G ++ Y L+ + G++ AL +F M +K PD TY+SL++
Sbjct: 758 FNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDS 817
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
L +E ++ A+ F S++ + S+ + S ++ ++
Sbjct: 818 LGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMV 859
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/503 (21%), Positives = 222/503 (44%), Gaps = 66/503 (13%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ N + ++Y++++ L + + + + K++K + + Y +I L +
Sbjct: 384 KENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQ 443
Query: 136 QKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRG--------- 184
+A+ +F+++K + P++ N+L+ VL G +D L + EM +G
Sbjct: 444 PEAWQLFHDLKE--QGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDS 501
Query: 185 --------------VEFSTIGF--------GVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
VE+ ++GF + F N + + + +L+ ++K E
Sbjct: 502 NAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHE--C 559
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE- 281
I V ++ G K R++EA +L E+ + C+P + Y LM S ++R+
Sbjct: 560 IPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYS------SLMASFYKRDQ 613
Query: 282 -----VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI-VSGKFTIDDDVLN 335
+ + + G + Y +V +C++ ++ + + V G+ + ++ +
Sbjct: 614 EEESLSLFDEMVRKGCVADVSTYS------LVINCLCKSDDVDQALDVFGR--MKEEGME 665
Query: 336 ALIGS----VSSIDPRSAIVF----FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
L+G+ +SS+ I F FN + E VP + + L K N+ DE ++
Sbjct: 666 PLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKL 725
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
+ + D+ +Y ++ L SGRL EA+ + +M +G +PDV Y SLM+ +
Sbjct: 726 VDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGK 785
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
L A ++ M C ++ TY+ LI + G +E A F N + KG P+
Sbjct: 786 GGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGV 845
Query: 508 YTSLLEGLCQETNLQAAFEVFNK 530
Y+SL++ ++ + A E+F +
Sbjct: 846 YSSLIDSFGKKGMVDRALELFEE 868
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 203/447 (45%), Gaps = 40/447 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++ L + +++ S+L++++ Y ++ S + +++ S+F+E
Sbjct: 564 VTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDE 623
Query: 145 -VKFNC-EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
V+ C D+ + ++ L +D AL +F M G+E + + ++
Sbjct: 624 MVRKGCVADV--STYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKD 681
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
K+ L + +E++ E+S++ + + ++++G K RV+EA K++D ++ + PD
Sbjct: 682 EKIDFALQIFNELQ--ESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLF 739
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + G + E + K + G P Y +
Sbjct: 740 TYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLM------------------- 780
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
DVL G +S A++ F M +K VP + T S+L +L K + +
Sbjct: 781 ---------DVLGKG-GKLSH-----ALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVE 825
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E ++ + ++ Y+ ++ G + A + +EM+R+ P++ YN+L+
Sbjct: 826 EAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLL 885
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+ L A+KL ++M GC +L TYNILI ++G ++ A F M EKG+
Sbjct: 886 SGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIV 945
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFN 529
PD T+TSL+E L + L A E+F+
Sbjct: 946 PDVITFTSLIESLGKVDKLLEACELFD 972
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 115/258 (44%), Gaps = 15/258 (5%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK---FTIDDDVLNALI- 338
+ + + G P TN Y F+L L+V+ + VIV GK F I D I
Sbjct: 239 IFNQMKSFGCNPSTNMYN-FVLELLVKGGFYHSA----VIVFGKLGQFRIQPDAQTFRIF 293
Query: 339 ----GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+DP + + MI+ G P + T + L L K DE + + +
Sbjct: 294 VHSFNRSGRLDPAAEPI--QEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNL 351
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ +Y +V+ L +GRL EA V EMK PD YN+L++ + A
Sbjct: 352 RCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMA 411
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
L+ +M G NL+TYNI+IS + G A +LFH++ E+G PD TY +L++
Sbjct: 412 CGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDV 471
Query: 515 LCQETNLQAAFEVFNKSV 532
L + + + + V
Sbjct: 472 LGKGGQMDKVLAIIKEMV 489
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 104/228 (45%), Gaps = 4/228 (1%)
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK-GRVPTL 365
++ RR +A E+G+ + KF ++ ++ ++ V+ D A FF + ++ G T+
Sbjct: 126 VIRRRKWDA-EMGKQLERLKFKLNPGLVCDVV--VNQKDLHLAKCFFTWAGQQDGYSHTV 182
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
T + + K L ++D +V++ + + M ++ ++ + A + +
Sbjct: 183 GTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQ 242
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
MK G +P + YN ++E + A ++ ++ + +T+ I + F+ G
Sbjct: 243 MKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGR 302
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
++ A M++ G+ P T+T L++ L + N+ A + FN N
Sbjct: 303 LDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKN 350
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 186/399 (46%), Gaps = 12/399 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL L + G I +A ++FDEM+ + +G+ + +C ++L + +L E+
Sbjct: 257 NILLKALCTAGRIKDAHQLFDEMASPP---DVVTYGIMVHGYCTLSELETAIKLLSEMAA 313
Query: 218 RE---NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
R N + SVIA+L C +V +A +V++++ + D + V F
Sbjct: 314 RGLELNPVAYTSVIALL-----CDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G + + +K G+A Y I GL + EA+ + + + +D
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428
Query: 335 NALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
LI + + A + N M++K P + T + LS LCK+ E+ + +
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
++ +YN +++ LC +G L +A + +M GL PDV Y +++ A C+ L
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A L +M G + TYN+L++ F G +EG RL MLEK + P+ TTY SL++
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
C E N+++ E++ ++ +V+ + + + C+
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCK 647
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 207/466 (44%), Gaps = 7/466 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY+ +LK+L + +I + ++ D Y ++ + A + +E+
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASPP---DVVTYGIMVHGYCTLSELETAIKLLSEM 311
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
++ P S++A+L +G + +A+++ ++M GV F + FC L
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ DE++KR + V +I+G C+ ++EA +VL E+ + D + Y
Sbjct: 372 AAARNWFDEMQKR--GLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYT 429
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
++ + + +G + E +V K + V P Y GL + +C A EL + S
Sbjct: 430 VLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489
Query: 326 KFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
++ N+LI G + + A+ M E G P + T + + LC+ + D
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+ + + + +YNV+++ C SGR+ +++ M K + P+ + YNSLM+
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C E ++ +++ M + N TYNILI + ++ AL M+EKG
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
A++Y +L+ L ++ A +F K + D + A + F I L
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEK-MRKDRLTAEPDVYNFYIDL 714
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 176/401 (43%), Gaps = 53/401 (13%)
Query: 154 PEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
PE CN++L L +D A+++F E+ E +T + + + C ++ + D
Sbjct: 226 PESCNAVLCRLP----LDEAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFD 277
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
E+ + + G +++HG+C +E A K+L E+ R + + +AY V
Sbjct: 278 EMASPPDVVTYG-----IMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSV------ 326
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
I L E ++ +A + E +V +D V
Sbjct: 327 -----------------------------IALLCDEGQVSDAVRVVEDMVMHGVVLDAAV 357
Query: 334 LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
++ G D +A +F+ M ++G T + L LC+ + E V + +
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D +Y V++ C G++ EA+ V +M +K + P+V Y +L + C++ +
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A +L +M + G N+ TYN LI+ + G +E A+R +M E G+ PD TYT+++
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537
Query: 513 EGLCQETNLQAAF----EVFNKSVNHDVMLARSILSTFMIS 549
LCQ L A E+ +K + ++ +++ F +S
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMS 578
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 122/257 (47%), Gaps = 2/257 (0%)
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNF 355
T Y + L RI +A +L + + S + ++ ++S ++ +AI +
Sbjct: 253 TCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELE--TAIKLLSE 310
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M +G +++ LC + + V V + + + D + ++S C G
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L A EM+++GL D Y +L+ CR L+ A+++ +M G + TY +
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI + +VG++ A + + M++K V P+ TYT+L +GLC++ ++ AA E+ ++ +
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490
Query: 536 VMLARSILSTFMISLCR 552
+ L ++ + LC+
Sbjct: 491 LELNIFTYNSLINGLCK 507
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L EA + QE+ K + YN L++A C ++ A +L+D+M ++ TY I
Sbjct: 238 LDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGI 290
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
++ + + E+E A++L M +G+ + YTS++ LC E + A V V H
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350
Query: 536 VMLARSILSTFMISLCRR 553
V+L ++ +T M CR+
Sbjct: 351 VVLDAAVFTTVMSGFCRK 368
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/522 (22%), Positives = 212/522 (40%), Gaps = 76/522 (14%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
+LAL +F + +F H+PL+Y +++ L+ R+++ + +L+Q+K+ I+ ++
Sbjct: 57 TLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFIS 116
Query: 125 IIPSLIQGKNTQKA-------------------------------FSVFNEVKFNCEDIG 153
+I S + ++++A F + N + N + G
Sbjct: 117 VIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDG 176
Query: 154 PE----ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
E N LL L + +D A K+ EMS +G + + + I C KLG+V
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLC---KLGKV- 232
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
E R+ S + +I+G CK EEAF++LDE+ + P+ I+Y +
Sbjct: 233 ---KEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIIN 289
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
G+V VL K G +P + + I G ++
Sbjct: 290 ALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKG------------------- 330
Query: 330 DDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
GS ++D F++ MI +G VP + + L LC + + V V+
Sbjct: 331 ---------GSHEALD------FWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFN 375
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+ N ++ +Y+ ++ +G L A V M G P+V Y +++ CR
Sbjct: 376 QMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNS 435
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
+ A L + M C N T+N I G ++ A+++F M G P+ TTY
Sbjct: 436 MFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYN 495
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
LL+ L ++ AF + + + L +T + C
Sbjct: 496 ELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYC 537
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 5/201 (2%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
++ M + G P + T + L K LCK N+ D ++ +S+ D SY ++S LC
Sbjct: 169 YSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCK 228
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G+++EA +E+ P V YN+L+ C+E A +L D+M G N+ +
Sbjct: 229 LGKVKEA----RELAMS-FTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVIS 283
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
Y +I+ S+ G +E +L + M +G +P+ T+TSL++G + A + +++ +
Sbjct: 284 YTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMI 343
Query: 533 NHDVMLARSILSTFMISLCRR 553
V+ + M LC +
Sbjct: 344 REGVVPNVVAYNALMHGLCSK 364
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 174/436 (39%), Gaps = 29/436 (6%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
+FT S Y++++ + +L ++ I + Y II +L N + +
Sbjct: 241 SFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELS 300
Query: 139 FSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+V K P + SL+ G AL +D M GV + + + +
Sbjct: 301 LAVL--AKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALM 358
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV----LIIHGFCKGKRVEEAFKVLDEL 252
C LG +S+ +++ ING V +I G+ K ++ A +V + +
Sbjct: 359 HGLCSKRSLGDAVSVFNQME------INGCCPNVRTYSALIDGYAKAGDLDGASEVWNWM 412
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL-GVAPRTNDYREFILGLIVERR 311
C P+ +AY + + S+F + L + ++ P T + FI GL R
Sbjct: 413 ITHGCHPNVVAYTCMVDVL-CRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGR 471
Query: 312 ICEA-KELGEVIVSGKF---TIDDDVLNALIGSVSSIDPR--SAIVFFNFMIEKGRVPTL 365
+ A K ++ SG F T +++L++L+ D R A M +G L
Sbjct: 472 VDWAIKVFDQMGNSGCFPNTTTYNELLDSLLK-----DRRFGEAFGLVKDMEHRGIELNL 526
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
T + + C E +E+ + D + N+++ C G++ A ++
Sbjct: 527 VTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDR 586
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK-FSEVG 484
+ PD+ Y SL+ C + A +M + G S N+ T+N+L+ FS +G
Sbjct: 587 LSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMG 646
Query: 485 EIEGALRLFHNMLEKG 500
GA++ +L G
Sbjct: 647 H-SGAVQFLDAVLGSG 661
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/202 (18%), Positives = 90/202 (44%), Gaps = 5/202 (2%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
Q N + +++++ +K L S +++ V Q+ + +++ Y ++ SL++ +
Sbjct: 448 QVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRF 507
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
+AF + +++ ++ N+++ G + AL++ +M RG + I +
Sbjct: 508 GEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIV 567
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-IIHGFCKGKRVEEAFKVLDELRI 254
I +C+ K+ + ++D + + + +IA +I G C VEEA L +
Sbjct: 568 IDAYCKQGKVNIAIQLMDRLSAGK---WHPDIIAYTSLISGICTHIGVEEAIVYLRRMLS 624
Query: 255 RECKPDFIAYRIVAEE-FKLMG 275
P+ + ++ F MG
Sbjct: 625 EGISPNVATWNVLVRHLFSNMG 646
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 214/474 (45%), Gaps = 56/474 (11%)
Query: 77 QPNFTHSPLSYHSILKSL-SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
QPN ++Y +I+ + + ++A++ + K +V++I + +Y II L +
Sbjct: 209 QPN----QITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQ 264
Query: 136 QKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
A ++F+E++ + I P + N ++ S G A ++ EM R + + F
Sbjct: 265 TDAQNLFSEMQE--KGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFS 322
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
V I + K + + +E+ R +I ++ +I GF K R++ A ++ +
Sbjct: 323 VLINALVKEGKFFEAEELYNEMLPR--GIIPNTITYNSMIDGFSKQNRLDAAERMFYLMA 380
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+ C PD I + I+ + + V + +L + + G+ T Y I G
Sbjct: 381 TKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFC------ 434
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+LG LNA A+ MI G P + T + L
Sbjct: 435 ---QLGN-------------LNA------------ALDLLQEMISSGVCPNVVTCNTLLD 466
Query: 374 NLCKRNKSDELVEVYKVLSA-----------NDYFTDMESYNVMVSFLCTSGRLREAYGV 422
LC K + +E++KV+ ND D+++YN+++ L G+ EA +
Sbjct: 467 GLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEEL 526
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+EM +GL PD YNS+++ C++ L A +++D M + G S ++ T+ LI+ + +
Sbjct: 527 YEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCK 586
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
VG + L +F M +G+ +A TY +L+ G CQ N+ A ++F + ++ V
Sbjct: 587 VGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGV 640
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 179/399 (44%), Gaps = 18/399 (4%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR- 218
LL V+ D + + +M R + + F + I FC +KL LS ++ K
Sbjct: 82 LLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLG 141
Query: 219 -ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
S++ S + +HG C RV EA ++ CKP+ IA+ + G V
Sbjct: 142 FHPSLVTFSTL----LHGLCVEDRVSEALHFFHQI----CKPNVIAFTTLMNGLCREGRV 193
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA----KELGEVI-VSGKFTIDDD 332
E +L + + G+ P Y + G+ A +++ EV + I
Sbjct: 194 VEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSA 253
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
+++ L D ++ F+ M EKG P L T + + C + E + + +
Sbjct: 254 IIDGLWKDGRQTDAQN---LFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMF 310
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D+ +++V+++ L G+ EA + EM +G+ P+ YNS+++ +++ L
Sbjct: 311 ERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLD 370
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A++++ M GCS ++ T++ILI + ++ ++L H M +G+ + TYT+L+
Sbjct: 371 AAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLI 430
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
G CQ NL AA ++ + ++ V +T + LC
Sbjct: 431 HGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLC 469
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 181/419 (43%), Gaps = 52/419 (12%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L+ L +G + A+ + D M G++ + I +G + C K+G +S L+ +RK
Sbjct: 182 TLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC---KMGDTVSALNLLRKM 238
Query: 219 E-------NSMINGSVIAVL------------------------------IIHGFCKGKR 241
E N +I ++I L +I+GFC R
Sbjct: 239 EEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGR 298
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
EA ++L E+ R+ PD + + ++ G FE E + + G+ P T Y
Sbjct: 299 WSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNS 358
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKG 360
I G + R+ A+ + ++ + + D + LI G + + + M +G
Sbjct: 359 MIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRG 418
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
V T + L C+ + +++ + + ++ ++ + N ++ LC +G+L++A
Sbjct: 419 LVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDAL 478
Query: 421 GVIQEMKRKGLD-----------PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
+ + M++ +D PDV YN L+ E A++L+++M G +
Sbjct: 479 EMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPD 538
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
TYN +I + ++ A ++F +M KG +PD T+T+L+ G C+ + EVF
Sbjct: 539 TITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVF 597
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 186/399 (46%), Gaps = 12/399 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL L + G I +A ++FDEM+ + +G+ + +C ++L + +L E+
Sbjct: 257 NILLKALCTAGRIKDAHQLFDEMASPP---DVVTYGIMVHGYCTLSELETAIKLLSEMAA 313
Query: 218 RE---NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
R N + SVIA+L C +V +A +V++++ + D + V F
Sbjct: 314 RGLELNPVAYTSVIALL-----CDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G + + +K G+A Y I GL + EA+ + + + +D
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428
Query: 335 NALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
LI + + A + N M++K P + T + LS LCK+ E+ + +
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
++ +YN +++ LC +G L +A + +M GL PDV Y +++ A C+ L
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A L +M G + TYN+L++ F G +EG RL MLEK + P+ TTY SL++
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
C E N+++ E++ ++ +V+ + + + C+
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCK 647
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 199/446 (44%), Gaps = 6/446 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY+ +LK+L + +I + ++ D Y ++ + A + +E+
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASPP---DVVTYGIMVHGYCTLSELETAIKLLSEM 311
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
++ P S++A+L +G + +A+++ ++M GV F + FC L
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ DE++KR + V +I+G C+ ++EA +VL E+ + D + Y
Sbjct: 372 AAARNWFDEMQKR--GLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYT 429
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
++ + + +G + E +V K + V P Y GL + +C A EL + S
Sbjct: 430 VLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489
Query: 326 KFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
++ N+LI G + + A+ M E G P + T + + LC+ + D
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+ + + + +YNV+++ C SGR+ +++ M K + P+ + YNSLM+
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C E ++ +++ M + N TYNILI + ++ AL M+EKG
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNK 530
A++Y +L+ L ++ A +F K
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEK 695
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 176/401 (43%), Gaps = 53/401 (13%)
Query: 154 PEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
PE CN++L L +D A+++F E+ E +T + + + C ++ + D
Sbjct: 226 PESCNAVLCRLP----LDEAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFD 277
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
E+ + + G +++HG+C +E A K+L E+ R + + +AY V
Sbjct: 278 EMASPPDVVTYG-----IMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSV------ 326
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
I L E ++ +A + E +V +D V
Sbjct: 327 -----------------------------IALLCDEGQVSDAVRVVEDMVMHGVVLDAAV 357
Query: 334 LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
++ G D +A +F+ M ++G T + L LC+ + E V + +
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D +Y V++ C G++ EA+ V +M +K + P+V Y +L + C++ +
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A +L +M + G N+ TYN LI+ + G +E A+R +M E G+ PD TYT+++
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537
Query: 513 EGLCQETNLQAAF----EVFNKSVNHDVMLARSILSTFMIS 549
LCQ L A E+ +K + ++ +++ F +S
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMS 578
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 122/257 (47%), Gaps = 2/257 (0%)
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNF 355
T Y + L RI +A +L + + S + ++ ++S ++ +AI +
Sbjct: 253 TCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELE--TAIKLLSE 310
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M +G +++ LC + + V V + + + D + ++S C G
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L A EM+++GL D Y +L+ CR L+ A+++ +M G + TY +
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI + +VG++ A + + M++K V P+ TYT+L +GLC++ ++ AA E+ ++ +
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490
Query: 536 VMLARSILSTFMISLCR 552
+ L ++ + LC+
Sbjct: 491 LELNIFTYNSLINGLCK 507
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L EA + QE+ K + YN L++A C ++ A +L+D+M ++ TY I
Sbjct: 238 LDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGI 290
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
++ + + E+E A++L M +G+ + YTS++ LC E + A V V H
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350
Query: 536 VMLARSILSTFMISLCRR 553
V+L ++ +T M CR+
Sbjct: 351 VVLDAAVFTTVMSGFCRK 368
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/484 (22%), Positives = 213/484 (44%), Gaps = 15/484 (3%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
P S + + ++ L+ + ++ + L+++++ + I + + +
Sbjct: 44 DPGSGDSARHHEATVRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSAD 103
Query: 137 KAFSVFNEVK-FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
+A F C D G + N LL L + + + ++D M GV+ + + +
Sbjct: 104 RALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLL 163
Query: 196 IWKFCENAKLGQVLSMLDEVRKR---ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
I C+N ++ MLDE+ ++ + + +G++++ G CK RVEEA L E
Sbjct: 164 IRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVS-----GMCKLGRVEEARGFLAET 218
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
+ + + + + E F+ M VF V+ + + G+ P Y + R +
Sbjct: 219 VPVQASYNAVVHALCGE-FR-MWEVFS---VVNEMVQRGLQPNVVTYTTIVDAFCKAREL 273
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
A + +VS T + AL+ G A+ +++M+++G P+ + + L
Sbjct: 274 RMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVL 333
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
+ LC ++ + + N + +Y+ +V +G L A + EMK G
Sbjct: 334 IRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGC 393
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
P+V Y ++++ C++ + A+ L D+M C N T+N LI + + G + AL
Sbjct: 394 KPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALN 453
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+FH M G P+ TY LL GL +E N + AF + + +N+ L+ +T + LC
Sbjct: 454 VFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLC 513
Query: 552 RRVL 555
+ +
Sbjct: 514 QMCM 517
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/434 (20%), Positives = 179/434 (41%), Gaps = 44/434 (10%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE- 144
SY++++ +L ++ + SV+ ++ + + Y I+ + + + + A ++
Sbjct: 224 SYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARM 283
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
V C P + +L+ DG + +AL M+ M G STI + V I C
Sbjct: 284 VSMGCT---PNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCI 340
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L L + +++ N+++ + ++ GF ++ A + +E++ CKP+ +
Sbjct: 341 GDLKGALDFFNSMKR--NALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVV 398
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + + E ++ K P T + I R+C+ +G
Sbjct: 399 VYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLI------GRLCDCGRVGR-- 450
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR-NKS 381
A+ F+ M G P T + L L + N
Sbjct: 451 --------------------------ALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHK 484
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
D V ++L+ N + + +YN +++ LC + A ++ M +G+ PD +N++
Sbjct: 485 DAFAMVIEMLN-NGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAI 543
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ A C+E + A L QM A C N+ Y ILIS+ G++ A+ ML +G+
Sbjct: 544 IHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGI 603
Query: 502 APDATTYTSLLEGL 515
P+ T+ L+ +
Sbjct: 604 CPNEATWNVLVRAI 617
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 186/397 (46%), Gaps = 6/397 (1%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
C SL+ G A ++ + + + G I + V I +C++ ++ + L +L+ +
Sbjct: 144 CTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM- 202
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
S+ V I+ C +++EA +VLD REC PD I Y I+ E
Sbjct: 203 ----SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSG 258
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
V + +L + RK G P Y I G+ E R+ EA + + S + N
Sbjct: 259 VGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNI 318
Query: 337 LIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
++ S+ S A + M+ KG P++ T + L LC++ ++V + + +
Sbjct: 319 ILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG 378
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ SYN ++ C ++ A ++ M +G PD+ YN+L+ A C++ + A
Sbjct: 379 CVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAV 438
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
++ +Q+ + GCS L TYN +I ++VG+ E A+ L M KG+ PD TY++LL GL
Sbjct: 439 EILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGL 498
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+E + A ++F+ + + + M+ LC+
Sbjct: 499 GREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCK 535
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 178/401 (44%), Gaps = 10/401 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALK 175
D Y +I + KA V + + P++ N++L L G + A++
Sbjct: 175 DVITYNVLIGGYCKSGEIDKALEVLERM-----SVAPDVVTYNTILRSLCDSGKLKEAME 229
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ D R I + + I C ++ +GQ + +LDE+RK+ V ++I+G
Sbjct: 230 VLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKK--GCKPDVVTYNVLING 287
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
CK R++EA K L+ + CKP+ I + I+ G + E +L + G +P
Sbjct: 288 ICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPS 347
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFN 354
+ I L +R + A ++ E + + N L+ G AI +
Sbjct: 348 VVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLE 407
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+ +G P + T + L LCK K D VE+ LS+ + +YN ++ L G
Sbjct: 408 IMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVG 467
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ A +++EM+RKGL PD+ Y++L+ RE + A K++ M + TYN
Sbjct: 468 KTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYN 527
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
++ + + A+ M+EKG P TYT L+EG+
Sbjct: 528 AIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 13/203 (6%)
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F MI +G +P + ++L + C+ K+ + + ++L + D+ +YNV++ C
Sbjct: 128 FLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYC 187
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
SG + +A V++ M + PDV YN+++ + C L+ A ++ D+ C ++
Sbjct: 188 KSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVI 244
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
TY ILI + A++L M +KG PD TY L+ G+C+E L A + N
Sbjct: 245 TYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNM 304
Query: 532 ---------VNHDVMLARSILST 545
+ H+++L RS+ ST
Sbjct: 305 PSYGCKPNVITHNIIL-RSMCST 326
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 124/293 (42%), Gaps = 37/293 (12%)
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+EE K L+ + + PD IA + F G + +++ G P Y
Sbjct: 122 LEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNV 181
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGR 361
I G C++ E+ + + +VL + SV+
Sbjct: 182 LIGGY------CKSGEIDKAL---------EVLERM--SVA------------------- 205
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P + T + + ++LC K E +EV + + D+ +Y +++ C + +A
Sbjct: 206 -PDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMK 264
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
++ EM++KG PDV YN L+ C+E L A K + M + GC N+ T+NI++
Sbjct: 265 LLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMC 324
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
G A RL +ML KG +P T+ L+ LC++ L A +V K H
Sbjct: 325 STGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKH 377
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N+ + L +G L E ++ M +G PDV SL+ CR + A ++ + +
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
SG ++ TYN+LI + + GEI+ AL + M VAPD TY ++L LC L+
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKE 226
Query: 524 AFEVFNKSVNHD 535
A EV ++ + +
Sbjct: 227 AMEVLDRQLQRE 238
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 170/361 (47%), Gaps = 23/361 (6%)
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
MS G G F C++ K + LS+L++ + +V+ +I G C+
Sbjct: 1 MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEK-----EEFVPDTVLYTKMISGLCEA 55
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL------GVA 293
EEA L +R C P+ + YRI L+ +E + + KR L G
Sbjct: 56 SLFEEAMDFLTRMRASSCLPNVLTYRI------LLCGCLNKEKLGRCKRILSMMITEGCY 109
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIV- 351
P + + A +L + +V V N LIG + SS +P ++
Sbjct: 110 PSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLD 169
Query: 352 ----FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
+ M+E G V +SN S+ LC K ++ V + + + + D +Y+ ++
Sbjct: 170 LAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVI 229
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+LC + ++ +A+ + QEMKR G+ PDV Y +L+++ C+ + A+ +D+M GC+
Sbjct: 230 GYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCA 289
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N+ TY LI + + ++ A ++ ML KG P+ TYT+L++GLC+ ++ A ++
Sbjct: 290 PNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQI 349
Query: 528 F 528
+
Sbjct: 350 Y 350
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 164/379 (43%), Gaps = 20/379 (5%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D A K + EM GV + + F C K + +++ E+ + I +
Sbjct: 168 LDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSK--GFIPDTSTY 225
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+I C +VE+AF++ E++ PD Y + + F G + + + +
Sbjct: 226 SKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMER 285
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDP 346
G AP Y I + R++ +A E+ E+++S T + ALI + I+
Sbjct: 286 DGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEK 345
Query: 347 RSAI-------------VFFNFMIEKG--RVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
S I V +F + G P + T L LCK + E ++ K +
Sbjct: 346 ASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSM 405
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
S + Y+ ++ C +G+L EA V M G DP+V Y+SL++ ++ L
Sbjct: 406 SVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRL 465
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A K+ +M + C+ N+ Y +I +VG+ + A +L M EKG P+ TYT++
Sbjct: 466 DLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAM 525
Query: 512 LEGLCQETNLQAAFEVFNK 530
++G + ++ E+ +
Sbjct: 526 IDGFGKSGRVEKCLELLQQ 544
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/454 (20%), Positives = 178/454 (39%), Gaps = 97/454 (21%)
Query: 154 PEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
P I NSL+ G A K+ +M G + + + + I C + + G+ +LD
Sbjct: 112 PRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGK--DVLD 169
Query: 214 EVRKRENSMING--------------------------SVIAVLIIHGF----------- 236
K M+ +VI ++ GF
Sbjct: 170 LAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVI 229
Query: 237 ---CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
C +VE+AF++ E++ PD Y + + F G + + + + G A
Sbjct: 230 GYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCA 289
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFF 353
P Y I + R++ +A E+ +
Sbjct: 290 PNVVTYTALIHAYLKSRKVSKANEV----------------------------------Y 315
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF---TDME--------- 401
M+ KG P + T + L LCK K ++ ++YK++ + DM
Sbjct: 316 EMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASN 375
Query: 402 -----SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+Y +V LC + +++EA +++ M +G +P+ Y++L++ CC+ L A++
Sbjct: 376 EPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQE 435
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
++ M G N+ TY+ LI + + ++ AL++ MLE AP+ YT +++GLC
Sbjct: 436 VFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLC 495
Query: 517 QETNLQAAFEVF----NKSVNHDVMLARSILSTF 546
+ A+++ K N +V+ +++ F
Sbjct: 496 KVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGF 529
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 188/430 (43%), Gaps = 31/430 (7%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLA 162
+V++++ D+S Y +I L +KAF +F E+K N I P++ +L+
Sbjct: 208 NVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRN--GIAPDVYVYTTLID 265
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
G+I+ A FDEM G + + + I + ++ K+ + + + + +
Sbjct: 266 SFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSK--GC 323
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK-PDF-IAYRIVAEEFKLMGSVFER 280
V +I G CK ++E+A ++ ++ + PD + +R+V G+ E
Sbjct: 324 TPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVD------GASNE- 376
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-G 339
P Y + GL ++ EA++L + + + V +ALI G
Sbjct: 377 -------------PNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDG 423
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ A F M+E G P + T S+L L K + D ++V + N +
Sbjct: 424 CCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPN 483
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ Y M+ LC G+ EAY ++ M+ KG +P+V Y ++++ + + +L
Sbjct: 484 VVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQ 543
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE- 518
QM + GC+ N TY +LI+ G ++ A +L M + Y ++EG +E
Sbjct: 544 QMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREF 603
Query: 519 -TNLQAAFEV 527
+L +FE+
Sbjct: 604 IASLYLSFEI 613
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 150/385 (38%), Gaps = 20/385 (5%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L G + A + EM +G T + I C +K+ + + E+++ N +
Sbjct: 197 LCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKR--NGIA 254
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
+ +I FCK +E+A DE+ C P+ + Y + + V + V
Sbjct: 255 PDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEV 314
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI---------VSGKFTIDDDVL 334
+ G P Y I GL +I +A ++ +++ V F + D
Sbjct: 315 YEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGAS 374
Query: 335 N--------ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
N AL+ G + + A M +G P L CK K DE
Sbjct: 375 NEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQ 434
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
EV+ + Y ++ +Y+ ++ L RL A V+ +M P+V Y +++
Sbjct: 435 EVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGL 494
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+ A KL M GC+ N+ TY +I F + G +E L L M KG AP+
Sbjct: 495 CKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNF 554
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNK 530
TY L+ C L A ++ +
Sbjct: 555 VTYRVLINHCCSTGLLDEAHKLLEE 579
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR-----EDLLRPAKKL 457
+N +V C SG AY ++++M + G P YN L+ C +D+L A+K
Sbjct: 115 FNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKA 174
Query: 458 WDQMFASGCSGNLKTYNILISKFSE----VGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
+ +M +G N + IS FS +G+ E A + M+ KG PD +TY+ ++
Sbjct: 175 YGEMLEAGVVLN----KVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIG 230
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
LC + ++ AF++F + + + + +T + S C+ I
Sbjct: 231 YLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFI 273
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 65/161 (40%), Gaps = 3/161 (1%)
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+S Y D + LC SG+ REA +++ ++ PD Y ++ C L
Sbjct: 1 MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLE---KEEFVPDTVLYTKMISGLCEASL 57
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
A +M AS C N+ TY IL+ ++ R+ M+ +G P + S
Sbjct: 58 FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
L+ C+ + A+++ K V + + + +C
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGIC 158
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 219/507 (43%), Gaps = 16/507 (3%)
Query: 30 WTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHS 89
W P E L L LR SL P LV V+ +AL FF WA +Q ++H P+ Y++
Sbjct: 150 WNPNFEGRLRHL-LR-SLKPPLVCAVLRSQ--ADERVALNFFYWADRQWRYSHHPVVYYT 205
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
+L LS ++ VL+ + I + +++ S + + A V ++
Sbjct: 206 MLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAG 265
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ ICN+ + VL G ++ ALK + M G++ + + I +C+ L ++
Sbjct: 266 VEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCD---LNRIE 322
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGF-CKGKRVEEAFKVLDELRIRECK--PDFIAYRI 266
L+ + + ++ + GF CK K++EE K L E + PD + Y
Sbjct: 323 DALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEV-KCLMEKMVWNSNLIPDQVTYNT 381
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ G + LK+ + G Y + + R+ EAK L + S
Sbjct: 382 LIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRG 441
Query: 327 FTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
D A++ + ID I+ M + G P + + L LC KS E
Sbjct: 442 CNPDVVTYTAIVDGFCRLGRIDEAKKIL--QQMYKHGCKPNTVSYTALLNGLCHSGKSLE 499
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
E+ V + + + +Y ++ L G+L EA + +EM KG P N L++
Sbjct: 500 AREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQ 559
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+ C+ + AKK ++ GC+ N+ + +I F ++G++E AL + +M G P
Sbjct: 560 SLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHP 619
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNK 530
DA TYT+L + L ++ L A E+ K
Sbjct: 620 DAVTYTALFDALGKKGRLDEAAELIVK 646
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 199/470 (42%), Gaps = 22/470 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+S++K +I ++ + D Y ++ L + K ++ + +
Sbjct: 306 VTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEK 365
Query: 145 VKFNCEDIGPEIC-NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ +N I ++ N+L+ +L+ G+ D+AL E +G +G+ + FC+
Sbjct: 366 MVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKG 425
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
++ + S++ ++ R N V+ I+ GFC+ R++EA K+L ++ CKP+ +
Sbjct: 426 RMDEAKSLVIDMYSRG---CNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTV 482
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
+Y + G E ++ + P Y + GL E ++ EA +L +
Sbjct: 483 SYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREM 542
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPR-SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
V F +N LI S+ A + + KG + + + C+
Sbjct: 543 VEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDM 602
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+ + V + + D +Y + L GRL EA +I +M KGLDP Y S+
Sbjct: 603 EAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSV 662
Query: 442 MEACCR----EDLLRPAKKLWD-QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
+ + +D+L +K+ Q F + YN +I K + G +E A +L +
Sbjct: 663 IHRYSQWGRVDDMLNLLEKMLKRQPFRT-------VYNQVIEKLCDFGNLEEAEKLLGKV 715
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEV----FNKSVNHDVMLARSI 542
L DA T L+E ++ +A++V F +++ D+ L +
Sbjct: 716 LRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPDLKLCEKV 765
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 171/404 (42%), Gaps = 10/404 (2%)
Query: 154 PEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
P + ++L VL+ A ++ M+ RG+E FG + + KL L +L
Sbjct: 200 PVVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLT 259
Query: 214 EVRKR--ENSM-INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
++K E S+ I + I VL+ KG ++E+A K L+ +++ KPD + Y + +
Sbjct: 260 LMQKAGVEPSLSICNTTIYVLV-----KGGKLEKALKFLERMQVTGIKPDIVTYNSLIKG 314
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
+ + + + ++ G P Y + L E++I E K L E +V I
Sbjct: 315 YCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIP 374
Query: 331 DDV-LNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
D V N LI +S A+ F +KG S + + C++ + DE +
Sbjct: 375 DQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLV 434
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+ + D+ +Y +V C GR+ EA ++Q+M + G P+ Y +L+ C
Sbjct: 435 IDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHS 494
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
A+++ + + N TY ++ G++ A L M+EKG P
Sbjct: 495 GKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEI 554
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L++ LCQ + A + + +N + +T + C+
Sbjct: 555 NLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQ 598
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 180/366 (49%), Gaps = 15/366 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N +L L S G AL++ +M + + + I FC ++ L ++ E+R+
Sbjct: 158 NIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREMRE 213
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR-ECKPDFIAYRIV----AEEFK 272
R N +I G+CK RV+EA KV DE+ + E KP+ + Y + ++ K
Sbjct: 214 RGGIAPNQYTYGT-VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 272
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
L ++ R+ ++++ GVA Y + L ++ R EA EL E + +D
Sbjct: 273 LDTALLYRDRMVER----GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVF 328
Query: 333 VLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
N LI G + + A+ F M +G T+ T ++L L K+ + E +++
Sbjct: 329 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEA 388
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
D+ YN +++ TSG + A+ ++ EM++K + PD YN+LM C +
Sbjct: 389 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 448
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A+KL D+M G +L TYN LIS +S G+++ ALR+ + M+ KG P TY +L
Sbjct: 449 DEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 508
Query: 512 LEGLCQ 517
++GLC+
Sbjct: 509 IQGLCK 514
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 154/383 (40%), Gaps = 81/383 (21%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A +F +M + T F + + C K + L +L ++ R N++ +VIA
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM-PRPNAVTYNTVIA--- 193
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
GFC RV+ A ++ E+R R G+
Sbjct: 194 --GFCSRGRVQAALDIMREMRERG----------------------------------GI 217
Query: 293 APRTNDYREFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRS 348
AP Y I G R+ EA K E++ G+ + + NALIG +D +
Sbjct: 218 APNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLD--T 275
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+++ + M+E+G T++T YN++V
Sbjct: 276 ALLYRDRMVERGVAMTVAT-----------------------------------YNLLVH 300
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L GR EAY +++EM KGL DV YN L+ C+E ++ A ++++ M G
Sbjct: 301 ALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRA 360
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ TY LI S+ G+++ +LF + +G+ PD Y +L+ N+ AFE+
Sbjct: 361 TVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM 420
Query: 529 NKSVNHDVMLARSILSTFMISLC 551
+ + +T M LC
Sbjct: 421 GEMEKKRIAPDDVTYNTLMRGLC 443
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 124/297 (41%), Gaps = 46/297 (15%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L DG A ++ +EM +G+ + + I C+ + + L + + + +
Sbjct: 296 NLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSR 355
Query: 218 RENSMINGSVIAVL-IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
R + +V+ +I+ K +V+E K+ DE R +PD + Y + G+
Sbjct: 356 RG---VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 412
Query: 277 V---FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
+ FE ++KKR +AP Y + GL + R+ EA++L + + D
Sbjct: 413 IDRAFEIMGEMEKKR---IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVT 469
Query: 334 LNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
N LI S D + A+ N M+ KG PTL T
Sbjct: 470 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT------------------------- 504
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
YN ++ LC +G+ +A +++EM G+ PD S Y SL+E ED
Sbjct: 505 ----------YNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED 551
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 112/263 (42%), Gaps = 2/263 (0%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+ ++ +L + + +++++ + LD Y +I + N +KA +F +
Sbjct: 294 TYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENM 353
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
SL+ L+ G + K+FDE RG+ + + I + +
Sbjct: 354 SRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNI 413
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ ++ E+ K+ + V ++ G C RV+EA K++DE+ R +PD + Y
Sbjct: 414 DRAFEIMGEMEKKR--IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYN 471
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + + G V + + + G P Y I GL + +A+ + + +V
Sbjct: 472 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 531
Query: 326 KFTIDDDVLNALIGSVSSIDPRS 348
T DD +LI +++ D R+
Sbjct: 532 GITPDDSTYISLIEGLTTEDERA 554
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 188/397 (47%), Gaps = 3/397 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L G ++ A ++ M G + ++ F + I +C +G+ L +LDE+ K
Sbjct: 283 NVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEK 342
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R +++ +V +I+G C K + A K+L+++ KP+ + Y + + G +
Sbjct: 343 R--NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 400
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E +L GVAP Y I L ++ EA I D A
Sbjct: 401 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 460
Query: 338 IGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I S + A +F+ M++ G +P + L K E + +++ L A
Sbjct: 461 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV 520
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+++ + + L +GR++EA V E+K KGL PDV Y+SL+ C++ + A +
Sbjct: 521 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 580
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L D+M G + N+ YN L+ + G+I+ A +LF M EKG+ PD+ TY+++++G C
Sbjct: 581 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 640
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ N+ AF +F++ + V + + + C+
Sbjct: 641 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE 677
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 196/436 (44%), Gaps = 18/436 (4%)
Query: 103 IDSVL--KQVKVN-KITLDSSVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEICN 158
ID VL K V V+ I ++ Y +I L + +KA + + C+ N
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKP------N 313
Query: 159 SLLAVLASDGY-----IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
S L +GY + AL++ DEM R + S + +G I C L +L+
Sbjct: 314 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 373
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
++ + + V+ +I G+ R+EEA ++LD + PD Y +
Sbjct: 374 KMTF--SGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSK 431
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
G + E L + + G+ P + FILG ++ EA + + ++ ++ +
Sbjct: 432 AGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPL 491
Query: 334 LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
LI G + + A+ F + G +P + T S L K + E ++V+ L
Sbjct: 492 YTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK 551
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D+ +Y+ ++S C G + +A+ + EM KG+ P++ YN+L++ C+ ++
Sbjct: 552 EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQ 611
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A+KL+D M G + TY+ +I + + + A LFH M KGV P + Y +L+
Sbjct: 612 RARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 671
Query: 513 EGLCQETNLQAAFEVF 528
G C+E +++ A +F
Sbjct: 672 HGCCKEGDMEKAMNLF 687
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 119/516 (23%), Positives = 225/516 (43%), Gaps = 43/516 (8%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ N S +SY +++ L + ++ + +L+++ + + + VY +I
Sbjct: 341 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 400
Query: 136 QKAFSVFNEVKFNCEDIGPEI-C-NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
++A + + + +C + P+I C N++++ L+ G ++ A E+ RG++ + FG
Sbjct: 401 EEARRLLDGM--SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 458
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI--------------------- 232
FI + + K+ + DE+ M N + VLI
Sbjct: 459 AFILGYSKTGKMTEAAKYFDEMLDH-GLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHA 517
Query: 233 -------------IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
IHG K RV+EA KV EL+ + PD Y + F G V E
Sbjct: 518 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEV-E 576
Query: 280 REVVLKKKRKL-GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
+ L + L G+AP Y + GL I A++L + + D + +I
Sbjct: 577 KAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMI 636
Query: 339 -GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
G S + A F+ M KG P + L CK ++ + +++ + +
Sbjct: 637 DGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA 696
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
T + S+N ++ C S +++EA + QEM K + PD Y ++++ C+ + A L
Sbjct: 697 TTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLL 755
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ +M + TY L+ ++++G+ LF M+ KGV PD TY ++ C+
Sbjct: 756 FKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCK 815
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
E NL AF++ ++ V ++ +I + +LC+R
Sbjct: 816 EDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKR 851
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 199/439 (45%), Gaps = 18/439 (4%)
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
+++++LS+ R ++A+ VL V+ I L++ Q+A VF+E+K
Sbjct: 504 NLMEALSIFRHLHAL-GVLPDVQTCSA---------FIHGLLKNGRVQEALKVFSELKE- 552
Query: 149 CEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
+ + P++ +SL++ G ++ A ++ DEM +G+ + + + C++ +
Sbjct: 553 -KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQ 611
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ + D + E + SV +I G+CK + V EAF + E+ + +P Y
Sbjct: 612 RARKLFDGMP--EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNA 669
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ G + + + ++ + G A T + I G +I EA +L + +++ +
Sbjct: 670 LVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQ 728
Query: 327 FTIDDDVLNALIG-SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
D +I + A + F M E+ + T ++L K +S E+
Sbjct: 729 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVF 788
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
+++ + A D +Y +++ C L EA+ + E+ KG+ + ++ L+ A
Sbjct: 789 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 848
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+ + L A KL D+M G +L + L+ F E G+++ A R+F + G+ PD
Sbjct: 849 CKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDT 908
Query: 506 TTYTSLLEGLCQETNLQAA 524
TT L+ G +T+ + A
Sbjct: 909 TTLIDLVNGNLNDTDSEDA 927
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 36/320 (11%)
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
E ++ + +I G C+ KR+ EA +E++ KPD+
Sbjct: 202 EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDY----------------- 244
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
N I G + E I E + +V+VS I+ N LI
Sbjct: 245 ------------------NACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLI 286
Query: 339 GSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
+ A MI G P T L + C+ + +E+ + +
Sbjct: 287 HGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLV 346
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
SY M++ LC L A ++++M GL P+V Y++L+ E + A++L
Sbjct: 347 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRL 406
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
D M SG + ++ YN +IS S+ G++E A + +G+ PDA T+ + + G +
Sbjct: 407 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSK 466
Query: 518 ETNLQAAFEVFNKSVNHDVM 537
+ A + F++ ++H +M
Sbjct: 467 TGKMTEAAKYFDEMLDHGLM 486
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 78/175 (44%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M EKG VP T + ++ LC+ + +E ++ + D + + ++ G
Sbjct: 200 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 259
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ E + M G+ ++ YN L+ C+ + A ++ M GC N +T+ +
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 319
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
LI + + AL L M ++ + P A +Y +++ GLC +L A ++ K
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEK 374
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 382 DELVEVYKVL-----SANDYFTDMESYNVMVSFL-CTSGRLREAYGVIQEMKRKGLDPDV 435
D L++ YK + +AN +F ++ ++++S + C S ++ M KGL P+
Sbjct: 160 DILIDSYKRMGMLDEAANVFFV-AKNDSILISLIRCNS---------LRSMGEKGLVPNT 209
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y + CR + AK +++M +G + + LI F G+I+ LR+
Sbjct: 210 YTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDV 269
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
M+ G+ + TY L+ GLC+ ++ A E+
Sbjct: 270 MVSCGIPINLITYNVLIHGLCKFGKMEKAAEIL 302
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 172/396 (43%), Gaps = 39/396 (9%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++A G +DNA ++ M +E T + I C + L++LD++ +
Sbjct: 124 NAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLR 180
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R + V +++ CK ++A K+LDE+R + C PD + Y +V G V
Sbjct: 181 R--GCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRV 238
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ LK G P T Y + GL R +A++L
Sbjct: 239 DDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKL------------------- 279
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
M KGR P + T + L LC+R + +E+ +
Sbjct: 280 ---------------MAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCT 324
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
+ SYN ++ C ++ A ++ M G PD+ YN+L+ A CR + A +L
Sbjct: 325 PNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVEL 384
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
Q+ GC+ L +YN +I ++ G+ E AL L + M+ KG+ PD TY+++ GLC+
Sbjct: 385 LHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCR 444
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
E ++ A + F K + + + + ++ LC+R
Sbjct: 445 EGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKR 480
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 174/382 (45%), Gaps = 5/382 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L G DNAL + D+M RG + + + + C+ + Q + +LDE+R
Sbjct: 156 NTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMR- 214
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ V ++++G C+ RV++A + L L C+P+ ++Y IV +
Sbjct: 215 -DKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERW 273
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE-AKELGEVIVSGKFTIDDDVLNA 336
+ E ++ + + G P + ++ + R + E A E+ + I T + N
Sbjct: 274 EDAEKLMAEMSRKGRPPNVVTF-NMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNP 332
Query: 337 LIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
++ + A+ F M+ G P + + + L LC+ + D VE+ L
Sbjct: 333 ILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG 392
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ SYN ++ L +G+ EA ++ EM KGL PD+ Y+++ CRE + A
Sbjct: 393 CTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAI 452
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
K + ++ G N YN ++ + A+ LF M+ G P+ +TYT L+EGL
Sbjct: 453 KAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGL 512
Query: 516 CQETNLQAAFEVFNKSVNHDVM 537
E ++ A E+ + + V+
Sbjct: 513 AYEGLVKEAREMMAELCSRGVV 534
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 97/227 (42%), Gaps = 12/227 (5%)
Query: 76 QQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
Q P + +P LSY+ IL + ++++ + ++ + + D Y ++ +L +G
Sbjct: 317 QIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGG 376
Query: 134 NTQKAFSVFNEVK-FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
A + +++K C + N+++ L G + AL++ +EM +G++ I +
Sbjct: 377 EVDAAVELLHQLKDKGCTPVLISY-NTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITY 435
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVL 249
C ++ + + +V+ R N+++ + I+ G CK + A +
Sbjct: 436 STISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNA-----ILLGLCKRRATHSAIDLF 490
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
+ C P+ Y I+ E G V E ++ + GV +T
Sbjct: 491 TYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKT 537
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 186/399 (46%), Gaps = 12/399 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL L + G I +A ++FDEM+ + +G+ + +C ++L + +L E+
Sbjct: 257 NILLKALCTAGRIKDAHQLFDEMASPP---DVVTYGIMVHGYCTLSELETAIKLLSEMAA 313
Query: 218 RE---NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
R N + SVIA+L C +V +A +V++++ + D + V F
Sbjct: 314 RGLELNPVAYTSVIALL-----CDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G + + +K G+A Y I GL + EA+ + + + +D
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428
Query: 335 NALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
LI + + A + N M++K P + T + LS LCK+ E+ + +
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
++ +YN +++ LC +G L +A + +M GL PDV Y +++ A C+ L
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A L +M G + TYN+L++ F G +EG RL MLEK + P+ TTY SL++
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
C E N+++ E++ ++ +V+ + + + C+
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCK 647
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 199/446 (44%), Gaps = 6/446 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY+ +LK+L + +I + ++ D Y ++ + A + +E+
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASPP---DVVTYGIMVHGYCTLSELETAIKLLSEM 311
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
++ P S++A+L +G + +A+++ ++M GV F + FC L
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ DE++KR + V +I+G C+ ++EA +VL E+ + D + Y
Sbjct: 372 AAARNWFDEMQKR--GLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYT 429
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
++ + + +G + E +V K + V P Y GL + +C A EL + S
Sbjct: 430 VLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489
Query: 326 KFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
++ N+LI G + + A+ M E G P + T + + LC+ + D
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+ + + + +YNV+++ C SGR+ +++ M K + P+ + YNSLM+
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C E ++ +++ M + N TYNILI + ++ AL M+EKG
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNK 530
A++Y +L+ L ++ A +F K
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEK 695
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 176/401 (43%), Gaps = 53/401 (13%)
Query: 154 PEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
PE CN++L L +D A+++F E+ E +T + + + C ++ + D
Sbjct: 226 PESCNAVLCRLP----LDEAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFD 277
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
E+ + + G +++HG+C +E A K+L E+ R + + +AY V
Sbjct: 278 EMASPPDVVTYG-----IMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSV------ 326
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
I L E ++ +A + E +V +D V
Sbjct: 327 -----------------------------IALLCDEGQVSDAVRVVEDMVMHGVVLDAAV 357
Query: 334 LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
++ G D +A +F+ M ++G T + L LC+ + E V + +
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D +Y V++ C G++ EA+ V +M +K + P+V Y +L + C++ +
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A +L +M + G N+ TYN LI+ + G +E A+R +M E G+ PD TYT+++
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537
Query: 513 EGLCQETNLQAAF----EVFNKSVNHDVMLARSILSTFMIS 549
LCQ L A E+ +K + ++ +++ F +S
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMS 578
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 122/257 (47%), Gaps = 2/257 (0%)
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNF 355
T Y + L RI +A +L + + S + ++ ++S ++ +AI +
Sbjct: 253 TCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELE--TAIKLLSE 310
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M +G +++ LC + + V V + + + D + ++S C G
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L A EM+++GL D Y +L+ CR L+ A+++ +M G + TY +
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI + +VG++ A + + M++K V P+ TYT+L +GLC++ ++ AA E+ ++ +
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490
Query: 536 VMLARSILSTFMISLCR 552
+ L ++ + LC+
Sbjct: 491 LELNIFTYNSLINGLCK 507
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L EA + QE+ K + YN L++A C ++ A +L+D+M ++ TY I
Sbjct: 238 LDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGI 290
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
++ + + E+E A++L M +G+ + YTS++ LC E + A V V H
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350
Query: 536 VMLARSILSTFMISLCRR 553
V+L ++ +T M CR+
Sbjct: 351 VVLDAAVFTTVMSGFCRK 368
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 206/465 (44%), Gaps = 31/465 (6%)
Query: 82 HSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
H+P + ++ IL SL+ +Q S+ KQ++V I + +I +F
Sbjct: 6 HTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSF 65
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
SV ++ N+L+ L G + +L D++ +G + + +G +
Sbjct: 66 SVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGL 125
Query: 200 CENAKLGQ------VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
C K+G+ +L M+++ R N ++ + II G CK K V EA+ + E+
Sbjct: 126 C---KIGETRCAVKLLRMIEDRSTRPNVVMYNT-----IIDGLCKDKLVNEAYDLYSEMD 177
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
R PD I Y + F L+G + +L + + P Y I L E +
Sbjct: 178 ARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVK 237
Query: 314 EAKELGEVIVSGKFTIDDDVLN--------ALIGSVSSIDPRSAIVFFNFMIEKGRVPTL 365
EAK L V+ K I V+ L+G V ++A F+ M++ G P +
Sbjct: 238 EAKNLLAVMT--KEGIKPGVVTYSTLMDGYCLVGEV-----QNAKQIFHAMVQMGVNPNV 290
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
+ + + LCK + DE + + + + + D +YN ++ LC SGR+ A ++ E
Sbjct: 291 YSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNE 350
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M +G DV Y SL++A C+ L A L+ +M G + TY LI + G
Sbjct: 351 MHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGR 410
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
++ A LF ++L KG D TYT ++ GLC+E A + +K
Sbjct: 411 LKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSK 455
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 187/427 (43%), Gaps = 9/427 (2%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QP+ ++ ++++K L L ++ +V +D Y ++ L + T+
Sbjct: 77 QPD----TITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETR 132
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
A + ++ + N+++ L D ++ A ++ EM RG+ I + I
Sbjct: 133 CAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLI 192
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMIN-GSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
+ FC +L S+LDE+ + IN G I ++I+ CK V+EA +L +
Sbjct: 193 YGFCLLGQLMGAFSLLDEMILKN---INPGVYIYNILINALCKEGNVKEAKNLLAVMTKE 249
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
KP + Y + + + L+G V + + ++GV P Y I GL +R+ EA
Sbjct: 250 GIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEA 309
Query: 316 KELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
L ++ D N+LI G S SA+ N M +G+ + T ++L
Sbjct: 310 MNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDA 369
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK D+ ++ + M +Y ++ LC GRL+ A + Q + KG D
Sbjct: 370 LCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCID 429
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V Y ++ C+E + A + +M +GC N T+ I+I E E + A +L H
Sbjct: 430 VWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLH 489
Query: 495 NMLEKGV 501
M+ KG+
Sbjct: 490 EMIAKGL 496
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 152/322 (47%), Gaps = 1/322 (0%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I+ K K+ A + ++ ++ + +F+ I+ F +G + VL K KLG
Sbjct: 16 ILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLG 75
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAI 350
P T + GL ++ + ++ + +V+ F +D L+ + I + R A+
Sbjct: 76 YQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAV 135
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ ++ P + + + LCK +E ++Y + A F D +Y ++
Sbjct: 136 KLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGF 195
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C G+L A+ ++ EM K ++P V YN L+ A C+E ++ AK L M G +
Sbjct: 196 CLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGV 255
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TY+ L+ + VGE++ A ++FH M++ GV P+ +Y ++ GLC+ + A + +
Sbjct: 256 VTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLRE 315
Query: 531 SVNHDVMLARSILSTFMISLCR 552
++ +++ ++ + LC+
Sbjct: 316 MLHKNMVPDTVTYNSLIDGLCK 337
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 54/120 (45%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P + +N ++ + + A L QM G N T NILI+ F +G++ + +
Sbjct: 8 PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+L+ G PD T +L++GLC + ++ + +K V + T + LC+
Sbjct: 68 LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/488 (23%), Positives = 214/488 (43%), Gaps = 11/488 (2%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSV 106
+S SL +++ + + HSL F + P T + IL SL S+
Sbjct: 21 ISTSLYSQLHHHHQDDEHSLVSSFNRILNINP--TPPIFEFGKILGSLVKINCYQTAISL 78
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLAS 166
++++ N I D + +I Q +T +FSVF + + +L+ L
Sbjct: 79 HREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCL 138
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
G I AL D++ G + + +G I C K+GQ + L +R+ + ++ +
Sbjct: 139 KGQIHQALHFHDKVVALGFHLNKVCYGTLINGLC---KVGQTSAALQLLRRVDGKLVQPN 195
Query: 227 VIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
V+ II CK K V EAF + E+ + PD + Y + F ++G + + +
Sbjct: 196 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFN 255
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS---VS 342
K + P + + G E R+ EAK + +++ D +L+ V
Sbjct: 256 KMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVK 315
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
++ +I FN M + G + + + + CK K DE + ++K + + D+ +
Sbjct: 316 QVNKAKSI--FNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVT 373
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN ++ LC SG++ A ++ EM +G+ D YNS+++A C+ + A L +M
Sbjct: 374 YNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMK 433
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G ++ TY ILI + G ++ A +F ++L KG TYT +++G C
Sbjct: 434 DEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFD 493
Query: 523 AAFEVFNK 530
A + +K
Sbjct: 494 KALALLSK 501
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 154/350 (44%), Gaps = 44/350 (12%)
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
+ A + E+ D + + I+ F +G V K G P
Sbjct: 73 QTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTL 132
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSA------------- 349
I GL ++ +I +A + +V+ F ++ LI + + SA
Sbjct: 133 IKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLV 192
Query: 350 ---IVFFNF--------------------MIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
+V +N M+ KG P + T S L C K ++ +
Sbjct: 193 QPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIG 252
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
++ + + + D+ +++++V C GR++EA V+ M ++G+ PDV Y SLM+ C
Sbjct: 253 LFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYC 312
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ AK +++ M G + N+++YNI+I+ F ++ +++ A+ LF M K + PD
Sbjct: 313 LVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVV 372
Query: 507 TYTSLLEGLCQETNLQAAF----EVFNKSVNHDVMLARSILSTFMISLCR 552
TY SL++GLC+ + A E+ ++ V HD + SIL +LC+
Sbjct: 373 TYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILD----ALCK 418
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 164/429 (38%), Gaps = 40/429 (9%)
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
+++K L L QI+ +V L+ Y +I L + T A + V
Sbjct: 131 TLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGK 190
Query: 149 CEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV 208
+ N+++ + ++ A ++ EM +G+ + + I FC KL
Sbjct: 191 LVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDA 250
Query: 209 LSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
+ + +++ E IN V +++ GFCK RV+EA VL + + KPD + Y +
Sbjct: 251 IGLFNKMISEE---INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSL 307
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
+ + L+ V + + + + GV Y I G +++ EA L + +
Sbjct: 308 MDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNI 367
Query: 328 TIDDDVLNALIGS-------------VSSIDPRS-----------------------AIV 351
D N+LI V + R AI
Sbjct: 368 IPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIA 427
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
M ++G P + T + L LCK + + +++ L Y + +Y VM+ C
Sbjct: 428 LLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFC 487
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+ +A ++ +M+ G P+ Y ++ + +D A+KL +M A G K
Sbjct: 488 DNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLLFGWK 547
Query: 472 TYNILISKF 480
L ++F
Sbjct: 548 KAYCLFTRF 556
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 99/208 (47%), Gaps = 4/208 (1%)
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
D S + FN ++ P + + +L K N + +++ + N +D+ ++N
Sbjct: 36 DEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFN 95
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
++++ G ++ V + +KG +P+ +L++ C + + A D++ A
Sbjct: 96 ILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVAL 155
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G N Y LI+ +VG+ AL+L + K V P+ Y ++++ +C+ + A
Sbjct: 156 GFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEA 215
Query: 525 FEVF----NKSVNHDVMLARSILSTFMI 548
F+++ +K ++ DV+ +++S F I
Sbjct: 216 FDLYSEMVSKGISPDVVTYSALISGFCI 243
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 64/120 (53%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P + + ++ + + + + A L +M +G + +L T+NILI+ FS++G + +
Sbjct: 54 PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
F N+L+KG P+A T T+L++GLC + + A +K V L + T + LC+
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173
>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
Length = 454
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 211/486 (43%), Gaps = 79/486 (16%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
LSY ++K+L + +I+ S + ++ K+ D Y +I +L + + +A F
Sbjct: 11 LSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFET 70
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ P++ N+LL L +G + A +F M G+ S + + I FC+
Sbjct: 71 MP------EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKM 124
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+ +L + R+ S S + II+G CK ++V++A+++ +E+++ CKPD +
Sbjct: 125 CQFETAYGLLQLMASRKCSPTVYSYCS--IINGLCKNRKVDQAYQLFEEMKLAGCKPDRV 182
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + I GL V++R+ EAK+L V+
Sbjct: 183 TYNTL-----------------------------------IHGLCVKQRLHEAKDLLTVM 207
Query: 323 VSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
V F D ALI + + D + A V F M ++G P L T + L LC R K
Sbjct: 208 VENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKL 267
Query: 382 DELVEVYK--------VLSANDYFTDME--------------------SYNVMV--SFLC 411
+ V + V+ F ++ + NV+ +F
Sbjct: 268 RPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFK 327
Query: 412 TSGRLREAYGVIQEMKR---KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
G +E +E +R +G++PD+ YN L++ C+ + L A+K+ M SG
Sbjct: 328 GLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPP 387
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ TYN L+ G++E L H M+ +G PD T+++L+ GL + + AA+
Sbjct: 388 NIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFL 447
Query: 529 NKSVNH 534
N +++
Sbjct: 448 NLAMSQ 453
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 7/275 (2%)
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
++CKP+ ++Y + + G + + + + + + P Y I L RRI
Sbjct: 4 QDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISR 63
Query: 315 AKELGEVIVSGKFTIDDDVLNALI--GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
A E E + + +L L G V+ A F M G P+ T + L
Sbjct: 64 AIEFFETMPEPDVVTYNTLLGGLCKNGRVAQ-----ACSLFGSMEGAGITPSDVTYTTLI 118
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
CK + + + +++++ + SY +++ LC + ++ +AY + +EMK G
Sbjct: 119 DVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCK 178
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
PD YN+L+ C + L AK L M + + T+ LI I+ A L
Sbjct: 179 PDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVL 238
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
F M ++G APD T+T L+ LC L+ A V
Sbjct: 239 FQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSV 273
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 4/196 (2%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M + VP + T + + LCK + +E ++ + D T YN ++ LC +GR
Sbjct: 36 MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEPDVVT----YNTLLGGLCKNGR 91
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ +A + M+ G+ P Y +L++ C+ A L M + CS + +Y
Sbjct: 92 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 151
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
+I+ + +++ A +LF M G PD TY +L+ GLC + L A ++ V +
Sbjct: 152 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENS 211
Query: 536 VMLARSILSTFMISLC 551
+ + + LC
Sbjct: 212 FQPDKITFTALIEGLC 227
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 37/84 (44%)
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
+F+ C N +Y L+ G+I+ A M + + PD TY +++ LC+
Sbjct: 1 IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 60
Query: 521 LQAAFEVFNKSVNHDVMLARSILS 544
+ A E F DV+ ++L
Sbjct: 61 ISRAIEFFETMPEPDVVTYNTLLG 84
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/503 (23%), Positives = 222/503 (44%), Gaps = 44/503 (8%)
Query: 67 ALGFFNWA-SQQPNFTHSPLSYHSILKSLSLSRQI-NAIDSVLKQVKVNKITLDSSVYRF 124
AL +FN ++P + ++ +L ++ R +A+ S+ KQ+++ ++ D+
Sbjct: 105 ALAYFNHMLHRKPR--PCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHM 162
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
+I Q + FSV ++ + N+L+ L G A+++FD+M RG
Sbjct: 163 LINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARG 222
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVE 243
+ + I C K+G+ ++ RK + V+ II CK +RV
Sbjct: 223 YQPDVHTYTTIINGLC---KIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVN 279
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAE----------------------------EFKLM- 274
EA + ++ + P+ Y + + F L+
Sbjct: 280 EALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLI 339
Query: 275 ------GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFT 328
G+VFE VLK ++GV P Y + G ++ + EA++L +V+++
Sbjct: 340 NIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCK 399
Query: 329 IDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
D N LI G + A FN MI +G P + + + L LC+ + E ++
Sbjct: 400 PDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDL 459
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
+K + N D+ +Y++++ C G L +A+ + + M+ L P++ YN L++A C+
Sbjct: 460 FKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCK 519
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
L+ A+KL+ ++F G N++ Y +I+ + G ++ AL F NM E G P+ +
Sbjct: 520 SRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFS 579
Query: 508 YTSLLEGLCQETNLQAAFEVFNK 530
Y ++ G Q + A ++ +
Sbjct: 580 YNVIIRGFLQHKDESRAVQLIGE 602
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 176/394 (44%), Gaps = 9/394 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEIC--NSLLAVLASDGYIDNAL 174
D Y II L + T A +F ++ + C+ P++ ++++ L D ++ AL
Sbjct: 226 DVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQ---PDVVTYSTIIDSLCKDRRVNEAL 282
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIH 234
+F M +G+ + + I C ++ + +ML+E+ N M N V L+I+
Sbjct: 283 DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSL-NIMPN-IVTFSLLIN 340
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
FCK V EA VL + +P+ + Y + + L V E + G P
Sbjct: 341 IFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKP 400
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFF 353
Y I G +RI EAK+L ++ T D N LI + + R A F
Sbjct: 401 DVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLF 460
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
M+ G +P L T S L CK+ + +++ + + +M YN+++ +C S
Sbjct: 461 KNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKS 520
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
L+EA + E+ +GL P+V Y +++ C+E LL A + + M GC N +Y
Sbjct: 521 RNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSY 580
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
N++I F + + A++L M EKG D T
Sbjct: 581 NVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 188/426 (44%), Gaps = 45/426 (10%)
Query: 133 KNTQKAFSVFNEVKFNCEDIGPEIC----NSLL-AVLASDGYIDNALKMFDEMSHRGVEF 187
+N A + FN + P C N LL A++ Y D + + +M G+
Sbjct: 100 RNIDDALAYFNHMLHR----KPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSP 155
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
T + I F + ++ S+L ++ K + V +I+G CK + +A +
Sbjct: 156 DTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLT--IVTFNTLINGLCKVGKFGQAVE 213
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
+ D++ R +PD Y + +G + +K + G P Y I L
Sbjct: 214 LFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLC 273
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
+RR+ EA ++ F++M KG P + T
Sbjct: 274 KDRRVNEALDI----------------------------------FSYMKAKGISPNIFT 299
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
++L + LC ++ E + + + + ++ +++++++ C G + EA GV++ M
Sbjct: 300 YNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMT 359
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
G++P+V Y+SLM + + A+KL+D M GC ++ +YNILI+ + + I
Sbjct: 360 EMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIG 419
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
A +LF+ M+ +G+ PD +Y +L++GLCQ L+ A ++F + + + S +
Sbjct: 420 EAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILL 479
Query: 548 ISLCRR 553
C++
Sbjct: 480 DGFCKQ 485
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/494 (24%), Positives = 216/494 (43%), Gaps = 13/494 (2%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNW-ASQQPNFTHSPLSYHSILKSLSLSRQIN 101
LR +S V ++ L LA F +S + F HS + +++L + +++
Sbjct: 19 LRREISTDAVVKIFQ--CLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHR 76
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEI--C 157
++LK D + +I + ++AF+V E++ ED G P +
Sbjct: 77 EAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREME---EDYGVAPSLKTH 133
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N +L L G + A+ F+ + G + + +N K+ +++++++
Sbjct: 134 NLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITA 193
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + A+L +G CK R+EEA +L ++ C PD + Y + +
Sbjct: 194 NGCTPTIATYNALL--NGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRS 251
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
FE + K+ G+ T Y I GL+ +I +A + + + S D L+ +
Sbjct: 252 FEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 311
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G + +A+ F M +G P S L LCK K D +E+ +
Sbjct: 312 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 371
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D +YN+++ LC SG + A EM G PDV YN L+ C+ A
Sbjct: 372 TPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACG 431
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
++D M +S CS N+ TY LIS + ++ A F +M E+G PD+ Y+SL++GLC
Sbjct: 432 VFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLC 491
Query: 517 QETNLQAAFEVFNK 530
+ L+ +F++
Sbjct: 492 KSGKLEGGCMLFDE 505
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 189/441 (42%), Gaps = 13/441 (2%)
Query: 78 PNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQK 137
P+ L H + KS + + A+D + N T+D Y I+ L + K Q
Sbjct: 128 PSLKTHNLVLHGLCKS---GKVLAAMDH-FETTTTNGCTIDIHTYTAIVDWLAKNKKIQD 183
Query: 138 AFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
A ++ ++ N P I N+LL L G ++ A+ + ++ G + +
Sbjct: 184 AVALMEKITAN--GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 241
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
I + + + + E+ R ++ +V +I G + ++ +A V + +
Sbjct: 242 IDGLGKEKRSFEAYKLFKEMALR--GLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQ 299
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
C PD + + + G + + K G+AP Y I GL R++ A
Sbjct: 300 GCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 359
Query: 316 KELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
E+ + T D N LI G S D +A FF+ M+E G P + T + L
Sbjct: 360 LEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSG 419
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
CK +D V+ +S++ ++ +Y ++S LC +L +A Q MK +G PD
Sbjct: 420 FCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPD 479
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
Y+SL++ C+ L L+D+M SG + N +T LI + ++ A+ LF+
Sbjct: 480 SFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFN 538
Query: 495 NMLEKGVAPDATTYTSLLEGL 515
+ ++G+ P Y S++ L
Sbjct: 539 AIRKEGM-PHPYAYNSIISTL 558
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 112/241 (46%), Gaps = 2/241 (0%)
Query: 314 EAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK-GRVPTLSTLSNL 371
EA L + ++ F D + N LI G + +P A M E G P+L T + +
Sbjct: 77 EAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLV 136
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
LCK K ++ ++ + N D+ +Y +V +L + ++++A +++++ G
Sbjct: 137 LHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGC 196
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
P ++ YN+L+ C+ L A L ++ +GC+ ++ TY LI + A +
Sbjct: 197 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYK 256
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
LF M +G+ D YT+L+ GL Q + A V+ + + LST + LC
Sbjct: 257 LFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLC 316
Query: 552 R 552
+
Sbjct: 317 K 317
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/506 (22%), Positives = 220/506 (43%), Gaps = 21/506 (4%)
Query: 66 LALGFFNWASQQ-PNFTHSPLSY----HSILKSLSLSRQINAIDSVLKQVKVNKITLDSS 120
L L F S PNF HS LS H +++ LS I ++++ V+++ + S
Sbjct: 116 LGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVES 175
Query: 121 -------------VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASD 167
+Y ++ + +Q K ++ F ++ + CN LL L
Sbjct: 176 LISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRT 235
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G++D A +++ E+ G+E + + + C++ K V+ L ++ + + V
Sbjct: 236 GWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGK--GVFADIV 293
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+I+ +C+ VEEAF++L+ R +P + Y + +G + VL +
Sbjct: 294 TYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEM 353
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDP 346
+LG+ P Y ++ + I EA+E+ + + D ++LIG ++ +
Sbjct: 354 LQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHL 413
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A++ F M G VP + L C+ + +++ + A F D+ +YN
Sbjct: 414 YQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTF 473
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
++ LC +A + EM +G+ PD + +L+ C++ + A L++ M +
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ TYN LI F + GE+ A L+ +M+ K + PD +Y ++L G C L A
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALN 593
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+ ++ + + +T + CR
Sbjct: 594 LCDQMLEKGIRPNLVTCNTLIKGYCR 619
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 173/377 (45%), Gaps = 9/377 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ +G ++ A ++ + S RG+E + + ++ C+ K + +L E+ +
Sbjct: 296 NTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQ 355
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
N + L++ C+ + EA ++ DE+ R PD +++ + G +
Sbjct: 356 L-GLTPNAATYNTLLVE-ICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHL 413
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKF---TIDDDV 333
++ + ++ + G+ P Y I G + +A ++ E++ G F +
Sbjct: 414 YQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTF 473
Query: 334 LNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
LN L D A + FN M+E+G VP T + L + CK D+ + +++ +
Sbjct: 474 LNGLCKKKMFAD---ADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVR 530
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ D +YN ++ C +G + A + +M RK + PD Y +++ C LL
Sbjct: 531 TNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPE 590
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A L DQM G NL T N LI + G++ A M+ G+ PD+ +Y +L++
Sbjct: 591 ALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLID 650
Query: 514 GLCQETNLQAAFEVFNK 530
G +E NL+ AF + N+
Sbjct: 651 GYLKEANLEKAFILINE 667
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 174/387 (44%), Gaps = 9/387 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+LL + I A ++FDEMS RGV + F I N L Q L E+ +
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMER 425
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ ++ +VI ++I GFC+ + +A K+ DE+ R C D + Y
Sbjct: 426 --SGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMF 483
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ +++ + + G+ P + I G + + +A L E +V D N L
Sbjct: 484 ADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTL 543
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G + + A ++ MI K +P + + C E + + +
Sbjct: 544 IDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGI 603
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ + N ++ C SG + +AY + +M G+ PD YN+L++ +E L A
Sbjct: 604 RPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFI 663
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L ++M G N+ TYN++++ F G+++ A ++ M+E G+ PD TY+SL+ G
Sbjct: 664 LINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHV 723
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSIL 543
+ N++ AF HD ML R ++
Sbjct: 724 SQDNMKEAFRF------HDEMLQRGLV 744
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 195/424 (45%), Gaps = 9/424 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
L+Y++IL L + + VL ++ +T +++ Y ++ + + N +A +F+E
Sbjct: 328 LTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDE 387
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ + + P++ + SL+ VLA +G++ AL F EM G+ + + + I FC N
Sbjct: 388 M--SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRN 445
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L L M DE+ R M V ++G CK K +A + +E+ R PDF
Sbjct: 446 GALSDALKMRDEMLARGCFM--DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFY 503
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
+ + + G++ + + + + + P Y I G + AKEL + +
Sbjct: 504 TFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDM 563
Query: 323 VSGKFTIDDDVLNALI--GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ K I D + + G SS A+ + M+EKG P L T + L K C+
Sbjct: 564 IR-KDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD 622
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+ E + +N D SYN ++ L +A+ +I EM+++GL ++ YN
Sbjct: 623 MPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNL 682
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
++ C E ++ A+++ +M G + + TY+ LI+ ++ A R ML++G
Sbjct: 683 ILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRG 742
Query: 501 VAPD 504
+ PD
Sbjct: 743 LVPD 746
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 128/273 (46%), Gaps = 13/273 (4%)
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR 347
R+ GV+ N + + GL+ + A E+ +V G ++ LN ++ ++
Sbjct: 214 RRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKF 273
Query: 348 SAIVFF-NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
++FF + M KG + T + L C+ +E ++ S+ + +YN +
Sbjct: 274 ENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAI 333
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC G+ A V+ EM + GL P+ + YN+L+ CR D + A++++D+M G
Sbjct: 334 LYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGV 393
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+L +++ LI + G + AL F M G+ PD YT L++G C+ L A +
Sbjct: 394 LPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALK 453
Query: 527 VFNKSVNHDVMLARSIL------STFMISLCRR 553
+ D MLAR +TF+ LC++
Sbjct: 454 M------RDEMLARGCFMDVVTYNTFLNGLCKK 480
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 116/257 (45%), Gaps = 12/257 (4%)
Query: 78 PNFTHSPLSYHSILKSLSLSRQINAIDSVLK-QVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
P+F K ++ + +N +++++ +K +K+T Y +I +
Sbjct: 500 PDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVT-----YNTLIDGFCKAGEMG 554
Query: 137 KAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+A +++++ +DI P+ + ++L S G + AL + D+M +G+ + +
Sbjct: 555 RAKELWDDMIR--KDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNT 612
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
I +C + + + L ++ N +I S +I G+ K +E+AF +++E+
Sbjct: 613 LIKGYCRSGDMPKAYEYLSKMI--SNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
R + + I Y ++ F G + E E VL+K ++G+ P Y I G + + + E
Sbjct: 671 RGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKE 730
Query: 315 AKELGEVIVSGKFTIDD 331
A + ++ DD
Sbjct: 731 AFRFHDEMLQRGLVPDD 747
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 210/433 (48%), Gaps = 9/433 (2%)
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMS 181
F++ SL++ + ++ VF ++ +C + P++ ++++ + G +D+A+++F +M
Sbjct: 167 FLLSSLVKANEVKMSYQVF-DIMCHC-GVTPDVYLFSTMVNAFCTGGRVDDAIELFRKME 224
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGK 240
GV + + + I C+N +L + +++ K + S++ ++I+G K +
Sbjct: 225 KVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKER---VKPSLVTYGVLINGLVKLE 281
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
R +EA +L E+ R P+ + Y + + + +G++ + G++P +
Sbjct: 282 RFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCN 341
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEK 359
I G ++ A+ L E +++G I+ ++I + SA++F M+ +
Sbjct: 342 SLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLR 401
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
P L+ L LC+ K E +E++ L + + + N ++ LC +G EA
Sbjct: 402 NFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEA 461
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+++EM +GL D YN+L+ ACC+E + KL ++M G ++ TYN+L+
Sbjct: 462 AKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHG 521
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+G+IE A L+H + G PDA TY +++G C+ ++ ++F + V +
Sbjct: 522 LCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQN 581
Query: 540 RSILSTFMISLCR 552
+ T + + C
Sbjct: 582 AVVYGTLIRAYCE 594
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 185/434 (42%), Gaps = 3/434 (0%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++I+ L + +++ ++++ ++ Y +I L++ + +A + E
Sbjct: 233 VTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKE 292
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + N+L+ G I AL++ D+M G+ +++ I +C++ +
Sbjct: 293 MSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQ 352
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ +L+E+ + G+ +V IH C R + A + E+ +R KP+
Sbjct: 353 MEHAEHLLEEMLTGGGVINQGTFTSV--IHRLCLKCRFDSALLFIMEMLLRNFKPNDGLL 410
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
++ G E + + + G A T I GL EA +L + ++
Sbjct: 411 TLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLE 470
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+D N LI M+ +G P + T + L LC K +E
Sbjct: 471 RGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEE 530
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
++ N F D +Y +M+ C + R+ E + QEM ++ + Y +L+
Sbjct: 531 AGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIR 590
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
A C +R A +L D M + G TY+ LI S +G ++ A +L M ++G++P
Sbjct: 591 AYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSP 650
Query: 504 DATTYTSLLEGLCQ 517
+ YT+L+ G C+
Sbjct: 651 NVVCYTALIGGYCK 664
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/481 (20%), Positives = 195/481 (40%), Gaps = 38/481 (7%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S ++Y ++ L + + + +LK++ ++ VY +I + N A +
Sbjct: 266 SLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIR 325
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+++ N CNSL+ +++A + +EM G + F I + C
Sbjct: 326 DDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLK 385
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+ L + E+ R +G + L++ G C+ + EA ++ L + + +
Sbjct: 386 CRFDSALLFIMEMLLRNFKPNDG--LLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTV 443
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
+ GS E +LK+ + G+ + Y IL E ++ E +L E +
Sbjct: 444 TSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEM 503
Query: 323 VSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
V D N L+ + ++ A ++ + G P T + CK N+
Sbjct: 504 VRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRV 563
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY---------GVIQ-------- 424
+E ++++ + + Y ++ C +G +REA+ G+ Q
Sbjct: 564 EEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSL 623
Query: 425 ------------------EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
EM+++GL P+V Y +L+ C+ + + +M +
Sbjct: 624 IHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNV 683
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
N TY I+I+ ++G ++ A +L + M +KG+ PDA TY +L G C+E ++ A +
Sbjct: 684 HPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALK 743
Query: 527 V 527
V
Sbjct: 744 V 744
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 160/356 (44%), Gaps = 3/356 (0%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L++ L +G A++++ + +G +T+ I CE + +L E+ +R
Sbjct: 413 LVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLER- 471
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
++ S+ +I CK +VEE FK+ +E+ R +PD Y ++ MG + E
Sbjct: 472 -GLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEE 530
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
+ + +K G P Y I G R+ E ++L + +V+ K + V LI
Sbjct: 531 AGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIR 590
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
+ + R A + M +G T +T S+L L D ++ +
Sbjct: 591 AYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSP 650
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
++ Y ++ C G++ + ++QEM + P+ Y ++ C+ ++ A KL
Sbjct: 651 NVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLL 710
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++M G + TYN L + F + G++E AL++ M G++ D TYT+L++G
Sbjct: 711 NEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDG 766
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 105/206 (50%), Gaps = 2/206 (0%)
Query: 349 AIVF--FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+VF F+ + KG P+L T + L +L K N+ +V+ ++ D+ ++ M
Sbjct: 144 GVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTM 203
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
V+ CT GR+ +A + ++M++ G+ P+V YN+++ C+ L A + ++M
Sbjct: 204 VNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERV 263
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+L TY +LI+ ++ + A + M ++G AP+ Y +L++G C+ N+ A +
Sbjct: 264 KPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQ 323
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+ + +++ + ++ + C+
Sbjct: 324 IRDDMISNGISPNSVTCNSLIQGYCK 349
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 159/418 (38%), Gaps = 87/418 (20%)
Query: 173 ALKMFDEMSH-RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL 231
A+ + D + H +F +GFGV F A G S+ K N +++ V
Sbjct: 123 AVTVVDLLIHVYSTQFKHLGFGVVFELFSLLANKGLFPSL-----KTCNFLLSSLV---- 173
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
K V+ +++V D + PD + + F G V + + +K K+G
Sbjct: 174 ------KANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVG 227
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
VAP Y I GL R+ EA + E
Sbjct: 228 VAPNVVTYNNIIHGLCKNGRLDEAFQFKE------------------------------- 256
Query: 352 FFNFMIEKGRV-PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+EK RV P+L T L L K + DE + K +S Y + YN ++
Sbjct: 257 ----KMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGY 312
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C G + A + +M G+ P+ NSL++ C+ + + A+ L ++M G N
Sbjct: 313 CRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQ 372
Query: 471 KTYN-----------------------------------ILISKFSEVGEIEGALRLFHN 495
T+ +L+S + G+ A+ L++
Sbjct: 373 GTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYR 432
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+LEKG A + T +L+ GLC+ + + A ++ + + ++L +T +++ C+
Sbjct: 433 LLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKE 490
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 102/220 (46%), Gaps = 6/220 (2%)
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLST-----LSNLSKNLCKRNKSDELVEVYKVLS 392
IGS ++++PR+A FF+F E P ++ L ++ K + E++ +L+
Sbjct: 96 IGS-NNVNPRTAFNFFHFASETLFEPAVAVTVVDLLIHVYSTQFKHLGFGVVFELFSLLA 154
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
F +++ N ++S L + ++ +Y V M G+ PDV +++++ A C +
Sbjct: 155 NKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVD 214
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A +L+ +M G + N+ TYN +I + G ++ A + M ++ V P TY L+
Sbjct: 215 DAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLI 274
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
GL + A + + + + +T + CR
Sbjct: 275 NGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCR 314
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 117/280 (41%), Gaps = 46/280 (16%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFN----------W--ASQQPNFTHSPLSYHSILKSL 94
L +V R I P + T++ L G N W + NF + +Y ++
Sbjct: 499 LKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDA-YTYGIMIDGY 557
Query: 95 SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGP 154
+ ++ + + +++ KI ++ VY +I + + N ++AF + ++++
Sbjct: 558 CKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTS 617
Query: 155 EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
+SL+ L++ G +D+A ++ DEM G+ + + + I +C+ ++ +V S+L E
Sbjct: 618 ATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQE 677
Query: 215 V--------RKRENSMING-------------------------SVIAVLIIHGFCKGKR 241
+ + MING +V + +GFCK +
Sbjct: 678 MSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGK 737
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
+EEA KV D + D I Y + + + +V RE
Sbjct: 738 MEEALKVCDLMSTGGISLDDITYTTLIDGWHKPLTVSSRE 777
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 124/558 (22%), Positives = 238/558 (42%), Gaps = 48/558 (8%)
Query: 4 RPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVIN-----P 58
RPA +A+ + I++ R R+W ++ LSPS+ A + P
Sbjct: 9 RPAAAVASTSTPDIVAELGRVLSTRRW--------NKGSAYKRLSPSVTAAHVADLFRAP 60
Query: 59 YLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQI------------------ 100
+ AL FF +++P F H+ S+ ++L+ L+ R
Sbjct: 61 VSPLDPATALAFFECVARRPGFRHTAASHAALLQLLARRRAPANYDKLVLSMISCSGTAE 120
Query: 101 ---NAIDSV--LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
A+D++ +++V ++ L Y + SL++ T+ +++ + E + P+
Sbjct: 121 DVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQ--EGLLPD 178
Query: 156 IC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ---VLS 210
N+++ G + A + F + G++ T + +C + L + +L
Sbjct: 179 TVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLM 238
Query: 211 MLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
M+ + R N ++I G C+ + V EA ++ + C + Y ++ +
Sbjct: 239 MMPLMGCRRNE-----YSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKG 293
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
G + + +L + GV P Y I G R+ +A + ++ D
Sbjct: 294 LCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPD 353
Query: 331 DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
D N+LI + A N I +G PT+ T +NL CK + D+ + V
Sbjct: 354 DWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSN 413
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ +++ D+++Y V+++ L RL+EA + EM GL P+V Y S+++ C+ +
Sbjct: 414 MISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGM 473
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ A +++ M GC N TY LI + ++ A+ L M E G+ P TYT+
Sbjct: 474 VGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTT 533
Query: 511 LLEGLCQETNLQAAFEVF 528
L++G C++ AF +F
Sbjct: 534 LIQGQCKKHEFDNAFRLF 551
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 191/465 (41%), Gaps = 38/465 (8%)
Query: 122 YRFIIPSLIQGKNTQKAFS-VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
Y +I L + + ++A VF V C + L+ L +G I +A + DEM
Sbjct: 252 YTILIQGLCEARCVREALVLVFMMVHDGCS-LNLHTYTLLIKGLCKEGRIHDARGLLDEM 310
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSM---------------------------LD 213
RGV S + I +C++ ++ L + LD
Sbjct: 311 PLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLD 370
Query: 214 EVRKRENSMINGSVIAVLI-----IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVA 268
E + N I +I I+G+CK +R+++A +V + CK D AY ++
Sbjct: 371 EAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLI 430
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFT 328
+ E + L + G+AP Y I G + A E+ +++
Sbjct: 431 NVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCH 490
Query: 329 IDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
+ +LI G + A+ M E G P + T + L + CK+++ D +
Sbjct: 491 PNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRL 550
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
++++ N D ++YNV+ LC SGR EAY + RKG+ Y SL++ +
Sbjct: 551 FEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSK 607
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
A L ++M GC +L TY++L+ + ++ AL + M GV +
Sbjct: 608 AGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVA 667
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
YT ++ + +E A +FN+ ++ + + + F+ S C+
Sbjct: 668 YTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCK 712
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 194/472 (41%), Gaps = 32/472 (6%)
Query: 103 IDSVLKQVKVNKIT----LDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN 158
ID L+ VK N I+ LD Y +I LI+ ++A NE+ N + P +
Sbjct: 404 IDDALR-VKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFAN--GLAPNVVT 460
Query: 159 --SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
S++ G + AL++F M H G + +G I+ ++ KL + ++++ +
Sbjct: 461 YTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALI--TK 518
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+E+ + G + +I G CK + AF++ + + PD AY ++ + G
Sbjct: 519 MQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGR 578
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
E L +K GV Y + G A L E +V+ D +
Sbjct: 579 AEEAYSFLVRK---GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSV 635
Query: 337 LIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
L+ ++ A+ + M G + + + + K K D ++ + ++
Sbjct: 636 LLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSG 695
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ +Y V +S C GR+ EA +I EM+R G+ PDV YN + C + A
Sbjct: 696 HKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAF 755
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVG----------------EIEGALRLFHNMLEK 499
+M + C N TY +L+ F ++ E+ +L M++
Sbjct: 756 STLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKH 815
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
G+ P TY+S++ G C+ T L+ A + + + D+ I T +I C
Sbjct: 816 GLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIY-TMLIKCC 866
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 111/481 (23%), Positives = 188/481 (39%), Gaps = 62/481 (12%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y SI+ + A V K ++ ++ Y +I LIQ K KA ++ +
Sbjct: 459 VTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITK 518
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ + G +L+ DNA ++F+ M G+ + V C++ +
Sbjct: 519 MQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGR 578
Query: 205 L----------GQVL------SMLDEVRKRENS---------MINGSVIAVL-----IIH 234
G VL S++D K N+ M+N A L ++
Sbjct: 579 AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQ 638
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
CK K++ EA +LD++ + K + +AY I+ E G + + + G P
Sbjct: 639 ALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKP 698
Query: 295 RTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFF 353
Y FI RI EA+ L GE+ G + DV+ + +F
Sbjct: 699 SATTYTVFISSYCKIGRIEEAEHLIGEMERDG---VTPDVV-------------TYNIFI 742
Query: 354 NFMIEKGRVP-TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
N G + STL + C+ N Y +L +F M N ++ T
Sbjct: 743 NGCGHMGYIDRAFSTLKRMVDASCEPN-----CWTYWLLL--KHFLKMSLINA--HYVDT 793
Query: 413 SG-----RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
SG L + +++ M + GL+P V Y+S++ C+ L A L D M S
Sbjct: 794 SGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDIS 853
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N + Y +LI ++ A+ +M+E G P +Y L+ GLC E + A +
Sbjct: 854 PNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSL 913
Query: 528 F 528
F
Sbjct: 914 F 914
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/465 (18%), Positives = 183/465 (39%), Gaps = 38/465 (8%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
Q+ T ++Y ++++ + + + + ++ N +T D Y + +L +
Sbjct: 520 QEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRA 579
Query: 136 QKAFS-------VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFS 188
++A+S V +V + SL+ + G D A + ++M + G +
Sbjct: 580 EEAYSFLVRKGVVLTKVTYT----------SLVDGFSKAGNTDFAAVLIEKMVNEGCKAD 629
Query: 189 TIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGFCKGKRVEEAFK 247
+ V + C+ KL + LS+LD++ S + +++A +II K + + A
Sbjct: 630 LYTYSVLLQALCKQKKLNEALSILDQMTV---SGVKCNIVAYTIIISEMIKEGKHDHAKS 686
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL- 306
+ +E+ KP Y + + +G + E E ++ + + GV P Y FI G
Sbjct: 687 LFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCG 746
Query: 307 ---IVERRICEAKELGEVIVSG---------KFTIDDDVLNALI----GSVSSIDPRSAI 350
++R K + + K + ++NA G + I+
Sbjct: 747 HMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVW 806
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
M++ G PT+ T S++ CK + +E + + D + E Y +++
Sbjct: 807 QLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCC 866
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C +A + +M G P + Y+ L+ C E AK L+ + + N
Sbjct: 867 CDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNE 926
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ IL + G ++ +L M + D+ +Y+ L + +
Sbjct: 927 VAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSI 971
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 124/525 (23%), Positives = 228/525 (43%), Gaps = 16/525 (3%)
Query: 30 WTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHS 89
W P E+ L L LR SL+P LV V+ +AL FF WA +Q + H + Y++
Sbjct: 147 WNPKFEENLRHL-LR-SLNPRLVCAVLRSQ--DDERIALDFFYWADRQWRYRHDAIVYYT 202
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
+L LS +R +L+ + I + +++ S + + A + ++
Sbjct: 203 MLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAG 262
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ ICN+ + VL ++ AL+ + M G+E + + I +C+ ++ L
Sbjct: 263 VEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDAL 322
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RIRECKPDFIAYRIVA 268
++ E+ + S V+ CK ++VEE ++++ + + PD + Y +
Sbjct: 323 ELIAEMPFKGCPPDKVSYYTVMAF--LCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLI 380
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFT 328
G + V L++ + G Y + + I +AK L + S
Sbjct: 381 YALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCN 440
Query: 329 IDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
D A+I V ID A M + G P T + L LC KS E
Sbjct: 441 PDVVTYTAIIDGFCRVGKID--EAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAR 498
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
E+ V + + + +Y+ ++ L G+L EA + +EM KG P+ N L+++
Sbjct: 499 EMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSL 558
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
CR + AKK ++ GC+ N+ + +I F ++G+++ AL + +M PDA
Sbjct: 559 CRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDA 618
Query: 506 TTYTSLLEGLCQETNLQAAFEV----FNKSVNHDVMLARSILSTF 546
TYT+L + L +++ L A E+ K ++ + R+++ F
Sbjct: 619 ITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRF 663
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/472 (21%), Positives = 201/472 (42%), Gaps = 14/472 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY+ ++K +I+ ++ ++ D Y ++ L + + ++ +
Sbjct: 303 VSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMEN 362
Query: 145 VKFNCEDIGPEIC-NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ N I ++ N+L+ L+ G+ D+AL E +G +G+ + FC+N
Sbjct: 363 MVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNK 422
Query: 204 KLGQVLSM-LDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+ + S+ +D K N + V II GFC+ +++EA K+L ++ CKP+ +
Sbjct: 423 NIDKAKSLVIDMYSKGCNPDV---VTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTV 479
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y ++ G E ++ + P Y + GL E ++ EA +L +
Sbjct: 480 TYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREM 539
Query: 323 VSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
+ F + +N LI S+ + + A + + KG + +++ C+
Sbjct: 540 IEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDL 599
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
D + + + + ++ D +Y + L RL EA +I +M KG+DP Y ++
Sbjct: 600 DAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAV 659
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKT-YNILISKFSEVGEIEGALRLFHNMLEKG 500
+ C+ + KL ++M A KT YN +I K G E A +L +L
Sbjct: 660 IHRFCQWGRVDDMMKLLEKMIA---RQPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTA 716
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEV----FNKSVNHDVMLARSILSTFMI 548
DA T L+E + N +A++V F +++ D+ L + ++
Sbjct: 717 SKLDAKTCHILIESYLIDGNALSAYKVACQMFRRNLIPDLKLCEKVTKKLVL 768
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/437 (19%), Positives = 177/437 (40%), Gaps = 25/437 (5%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
Q N ++Y++++ +LS + L++ + +D Y ++ S + KN
Sbjct: 365 QNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNI 424
Query: 136 QKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
KA S+ + + P++ +++ G ID A KM +M G + +T+ +
Sbjct: 425 DKAKSLV--IDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYT 482
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
V + C N K + M++ E+ ++ ++HG + ++ EA + E+
Sbjct: 483 VLLNGLCHNGKSLEAREMINV--SEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMI 540
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+ P+ + ++ + +V + L++ G A ++ I G C
Sbjct: 541 EKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGF------C 594
Query: 314 EAKELG-------EVIVSGKF--TIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT 364
+ +L ++ +S K I L +G S +D S ++ M+ KG PT
Sbjct: 595 QIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVK--MLGKGIDPT 652
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
T + C+ + D+++++ + + A F + YN ++ LC G EA ++
Sbjct: 653 PVTYRAVIHRFCQWGRVDDMMKLLEKMIARQPFKTV--YNQVIEKLCYFGNREEAEKLLG 710
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
++ R D + L+E+ + A K+ QMF +LK + K G
Sbjct: 711 KVLRTASKLDAKTCHILIESYLIDGNALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDG 770
Query: 485 EIEGALRLFHNMLEKGV 501
A L +E+G+
Sbjct: 771 MPAEADDLMLRFVERGI 787
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 214/508 (42%), Gaps = 66/508 (12%)
Query: 50 SLVARVINPYLLTHHSLALGFFNWAS--------------QQPNFTHSPLSYHSILKSLS 95
++V + NP ++ L GFF + QP+ +Y++++
Sbjct: 114 TMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDV----FAYNALINGFC 169
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGP 154
+I+ VL +++ + D+ Y +I SL A V N++ NC+ P
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ---P 226
Query: 155 EICNSLLAVLAS--DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML 212
+ + + A+ +G +D ALK+ DEM RG++ +
Sbjct: 227 TVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT------------------ 268
Query: 213 DEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
II G CK V+ AF+++ L ++ C+PD I+Y I+
Sbjct: 269 -------------------IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALL 309
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
G E E ++ K P Y I L + +I EA L +++ T D
Sbjct: 310 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 369
Query: 333 VLNALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
+ LI + +D AI F MI G +P + + + LCK K+D+ +E++
Sbjct: 370 SYDPLIAAFCREGRLD--VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFG 427
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
L + SYN M S L +SG A +I EM G+DPD YNS++ CRE
Sbjct: 428 KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
++ A +L M + ++ TYNI++ F + IE A+ + +M+ G P+ TTYT
Sbjct: 488 MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVM 537
L+EG+ A E+ N V D +
Sbjct: 548 VLIEGIGFAGYRAEAMELANDLVRIDAI 575
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 149/322 (46%), Gaps = 2/322 (0%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I H C+ E+ +L+ + + PD I + + F + ++ + V++ K G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AI 350
P Y I G RI +A + + + S F+ D N +IGS+ S A+
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
N ++ PT+ T + L + DE +++ + + DM +YN ++ +
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C G + A+ +++ ++ KG +PDV YN L+ A + +KL +MF+ C N+
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TY+ILI+ G+IE A+ L M EKG+ PDA +Y L+ C+E L A E
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 531 SVNHDVMLARSILSTFMISLCR 552
++ + +T + +LC+
Sbjct: 394 MISDGCLPDIVNYNTVLATLCK 415
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 168/337 (49%), Gaps = 23/337 (6%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER---EVVLKKKR 288
+I+GFCK R+++A +VLD +R ++ PD + Y I ++GS+ R ++ LK
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI------MIGSLCSRGKLDLALKVLN 217
Query: 289 KL---GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV--SS 343
+L P Y I ++E + EA +L + ++S D N +I +
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ R+ + N + KG P + + + L + L + K +E ++ + + ++ +Y
Sbjct: 278 MVDRAFEMVRNLEL-KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+++++ LC G++ EA +++ MK KGL PD Y+ L+ A CRE L A + + M +
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN--- 520
GC ++ YN +++ + G+ + AL +F + E G +P++++Y ++ L +
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 521 -LQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
L E+ + ++ D + S++S LCR ++
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISC----LCREGMV 489
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 67/134 (50%)
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ E+ K PDV YN+L+ C+ + + A ++ D+M + S + TYNI+I
Sbjct: 146 VMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
G+++ AL++ + +L P TYT L+E E + A ++ ++ ++ +
Sbjct: 206 RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265
Query: 543 LSTFMISLCRRVLI 556
+T + +C+ ++
Sbjct: 266 YNTIIRGMCKEGMV 279
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/367 (17%), Positives = 151/367 (41%), Gaps = 17/367 (4%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N + ++Y ++++ L ++ ++ ++ + D Y II + + +A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 139 FSVFNEVKF-NCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
F + ++ CE P++ N LL L + G + K+ +M + + + + +
Sbjct: 283 FEMVRNLELKGCE---PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
I C + K+ + +++L ++ E + + +I FC+ R++ A + L+ +
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMK--EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
C PD + Y V G + + K ++G +P ++ Y L A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV--FFNFMIEKGRV---PTLSTLSN 370
+ ++S D+ N++I + R +V F +++ P++ T +
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLC----REGMVDEAFELLVDMRSCEFHPSVVTYNI 513
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
+ CK ++ ++ + V + + N + +Y V++ + +G EA + ++ R
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRID 573
Query: 431 LDPDVSF 437
+ SF
Sbjct: 574 AISEYSF 580
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 120/512 (23%), Positives = 236/512 (46%), Gaps = 51/512 (9%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
S AL F WAS QPN++ P +H +L+ L+ + +++ ++L+Q+ +KI +D S +
Sbjct: 73 SSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLI 132
Query: 125 IIPSLIQGKN-----------TQKAFSVFNEVKFN------------------------C 149
+ + + ++ F+V + +F
Sbjct: 133 FLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVA 192
Query: 150 EDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
+ + P++ N L+ L + A+ M ++M + G+ F + F E A +
Sbjct: 193 DAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEG 252
Query: 208 VLSMLDEVRKRENSMING----SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
L R +E + +G SV ++++G CK R+EEA + + E C PD +
Sbjct: 253 AL------RIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEE-GFC-PDQVT 304
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+ + G + + ++ + G Y I GL I EA E+ +V
Sbjct: 305 FNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMV 364
Query: 324 SGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
S + N LIG++ + +A + KG +P + T ++L + LC + +
Sbjct: 365 SRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNRE 424
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
+E+++ + D +Y++++ LC+ RL+EA +++EM+ G +V YN+L+
Sbjct: 425 IAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLI 484
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+ C+ + + A+ ++DQM G S + TYN LI+ + +E A +L M+ +G+
Sbjct: 485 DGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLK 544
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVF-NKSVN 533
PD TYT++L+ CQ+ +++ A ++ N ++N
Sbjct: 545 PDKFTYTTMLKYFCQQGDIKRAADIVQNMTLN 576
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/468 (20%), Positives = 200/468 (42%), Gaps = 5/468 (1%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y+ L L + ++ ++++ ++ + + D S + +I +L + + A + ++
Sbjct: 167 YNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMP 226
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
+ +L+ + ++ AL++ + M G E +++ V + C+ ++
Sbjct: 227 NYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIE 286
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ L + E E V +++G C+ +++ +++D + + + D Y
Sbjct: 287 EALRFIYE----EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNS 342
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ +G + E +L P T Y I L E + A EL V+ S
Sbjct: 343 LISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKG 402
Query: 327 FTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
D N+LI + R A+ F M EKG P T S L ++LC + E +
Sbjct: 403 VLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEAL 462
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
+ K + + ++ YN ++ LC + R+ +A + +M+ G+ YN+L+
Sbjct: 463 MLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGL 522
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+ + A +L DQM G + TY ++ F + G+I+ A + NM G PD
Sbjct: 523 CKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDI 582
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
TY +L+ GLC+ + A ++ ++L + + +LC+R
Sbjct: 583 VTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKR 630
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 162/361 (44%), Gaps = 4/361 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NSL++ L G ID A+++ M R E +T+ + I C+ + + + L V
Sbjct: 341 NSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHV-EAATELARVLT 399
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + + LI G C E A ++ +E++ + C PD Y I+ E +
Sbjct: 400 SKGVLPDVCTFNSLI-QGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRL 458
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E ++LK+ G A Y I GL R+ +A+++ + + + N L
Sbjct: 459 KEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTL 518
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G S A + MI +G P T + + K C++ ++ + ++ N
Sbjct: 519 INGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGC 578
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ +Y ++ LC +GR+ A +++ ++ KG+ YN +++A C+ + A +
Sbjct: 579 EPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMR 638
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVG-EIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L+ +M G ++ TY I+ G I+ A+ MLEKG+ P+ ++ L EGL
Sbjct: 639 LFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGL 698
Query: 516 C 516
C
Sbjct: 699 C 699
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 139/355 (39%), Gaps = 39/355 (10%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++++ +L + A + + + + D + +I L N + A +F E
Sbjct: 373 VTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEE 432
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+K D + L+ L S+ + AL + EM G + + + I C+N +
Sbjct: 433 MKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNR 492
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+G + D++ S SV +I+G CK KRVEEA +++D++ + KPD Y
Sbjct: 493 VGDAEDIFDQMEMLGVS--RSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTY 550
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + F G + +++ G P Y I GL R+ A +L +
Sbjct: 551 TTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQM 610
Query: 325 GKFTIDDDVLNALIGSV-----------------SSIDP--------------------R 347
+ N +I ++ DP +
Sbjct: 611 KGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQ 670
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
A+ F M+EKG +P + L++ LC + D L+++ ++ F+ E+
Sbjct: 671 EAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQSET 725
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 127/511 (24%), Positives = 229/511 (44%), Gaps = 37/511 (7%)
Query: 18 ISASNRTRPARKWTPLLEQTLHQ--------------LGLR-DSLSPSLVARVINPYLLT 62
I+ S+R P + L E L Q LGL D L P LV +VI + +
Sbjct: 23 IAMSHRPLPPAEIERLAEIILRQVVDSKRAGEGIEKSLGLYGDILVPDLVGKVI--HRIP 80
Query: 63 HHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVY 122
+ A F WA +Q FTH+ + +++L +R++ + N D Y
Sbjct: 81 DPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSY 140
Query: 123 RFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS---LLAVLASDGYIDNALKMFDE 179
++ + + +KA ++F E+K D G + S +L L S G I A ++F +
Sbjct: 141 NTLMNGFFKAGDVKKALALFGEMK----DSGIAVLRSHNIVLRGLCSGGKISMAWEVFKD 196
Query: 180 MSHRGVEFST--IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFC 237
MS G+ FS I + + I C++ K+ + +++ ++ + ++ V +I G
Sbjct: 197 MS--GI-FSPNLISYTIMIDGLCKSRKVDKAITLFKQMV--DKAIYPDVVTYGALIDGLG 251
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK--RKLGVAPR 295
K +RV+EA+ + +E R + C P + Y + + G + E + L R+ + P
Sbjct: 252 KQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRI-ENALTLYDDMVREPHLKPD 310
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV--SSIDPRSAIVFF 353
Y I GL + R +A EL E ++ + D N L+ + S + ++ +F
Sbjct: 311 MFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFR 370
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
+ P + T + L CK ++ + V++ K + D ++ ++ LC
Sbjct: 371 KMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKE 430
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
R+ EA+ + + + K PD +N+++ C+ + AKKL D+M SGC+ L TY
Sbjct: 431 SRIDEAHELFESIG-KTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATY 489
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
L++ F G AL ++H M+E G P+
Sbjct: 490 TALVTGFCRTGRYSDALIMYHEMIEMGFPPE 520
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 177/400 (44%), Gaps = 53/400 (13%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN+LL+V +++A F E + + + F + + + L++ E++
Sbjct: 105 CNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMK 164
Query: 217 KRENSMINGSVIAVL-----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
S IAVL ++ G C G ++ A++V ++ P+ I+Y I+ +
Sbjct: 165 D--------SGIAVLRSHNIVLRGLCSGGKISMAWEVFKDMS-GIFSPNLISYTIMIDGL 215
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
V + + K+ + P Y I GL +RR+ EA +L
Sbjct: 216 CKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDL------------- 262
Query: 332 DVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
F KG PT+ T + + LCK + + + +Y +
Sbjct: 263 ---------------------FEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDM 301
Query: 392 SANDYF-TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ DM +Y+ +++ L S R +AY + +EM G PDV YN+L++ C+
Sbjct: 302 VREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGC 361
Query: 451 LRPAKKLWDQM-FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
A +++ +M + C N+ TY +LI +F +V + A++L M + + PDA T+T
Sbjct: 362 EDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFT 421
Query: 510 SLLEGLCQETNLQAAFEVF---NKSVNHDVMLARSILSTF 546
++++ LC+E+ + A E+F K+ D +L ++L+ +
Sbjct: 422 TVIQKLCKESRIDEAHELFESIGKTCKPDSVLFNTMLAGY 461
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%), Gaps = 4/245 (1%)
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTL 368
RR+ +A + + F D+ N L+ G + D + A+ F M + G + L +
Sbjct: 116 RRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSG-IAVLRSH 174
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ + + LC K EV+K +S + ++ SY +M+ LC S ++ +A + ++M
Sbjct: 175 NIVLRGLCSGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCKSRKVDKAITLFKQMVD 233
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
K + PDV Y +L++ ++ ++ A L+++ A GC + TYN +I + G IE
Sbjct: 234 KAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIEN 293
Query: 489 ALRLFHNML-EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
AL L+ +M+ E + PD TY++L+ GL + A+E++ + ++ +T +
Sbjct: 294 ALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLL 353
Query: 548 ISLCR 552
LC+
Sbjct: 354 DGLCK 358
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 203/449 (45%), Gaps = 49/449 (10%)
Query: 96 LSRQINAIDSVLKQVKV---NKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDI 152
LSR N + + +KV I+ +++ Y II SL + ++A + ++ F
Sbjct: 232 LSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSST- 290
Query: 153 GPEICNSLLAVLASDGY-----IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
P++ + + DGY + ALK+ D+M +G++ + + I C+ K +
Sbjct: 291 -PDVVSYSTVI---DGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFE 346
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
+L E+ ++ +I +V+ +IHGF K V A K DE+ ++ PD+I Y +
Sbjct: 347 AEKVLREMMSQK--IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTL 404
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
+ F G V E + + + G+ P Y I C+A GE++
Sbjct: 405 IQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLI------DVYCKA---GEMV----- 450
Query: 328 TIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
+A N M++ G P + T L LCK + D E+
Sbjct: 451 --------------------NAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANEL 490
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
+ ++ YN MV+ +C +G + +A +++EM+ G+DPD Y ++++A CR
Sbjct: 491 LDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCR 550
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+ A KL +M G + T+N+L++ F +G +E RL MLEKG+ PDA T
Sbjct: 551 LGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAIT 610
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
Y +L++ C ++ +++ + N V
Sbjct: 611 YNTLMKQHCIRNSMNTTTKIYKRMRNQGV 639
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/492 (21%), Positives = 211/492 (42%), Gaps = 27/492 (5%)
Query: 64 HSLALGFFNWAS--QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVN-KITLDSS 120
++L L FF+WA ++P+ + H + S L + K+ + +
Sbjct: 116 YNLVLAFFDWARVRREPSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQF 175
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
+R I G N AF +F VL G++ A K+ D++
Sbjct: 176 THRLIYTYKYWGPNPI-AFDIF------------------FQVLVEIGHLSEARKLLDKL 216
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
G+ + F+ + N+ + + M +V N + + II+ C+
Sbjct: 217 LSYGLVVTVDSCNAFLSRIANNS---EGIEMAIKVFCEYGISWNTTSYNI-IIYSLCRLG 272
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+V+EA ++L ++ R PD ++Y V + + +G + + ++ + G+ P Y
Sbjct: 273 KVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYN 332
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEK 359
IL L + EA+++ ++S K D+ V LI + R+A +F+ M+ K
Sbjct: 333 SIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSK 392
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
P T + L + + K E ++ + + D +Y ++ C +G + A
Sbjct: 393 KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNA 452
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ + EM + G+ P++ Y +L++ C+ L A +L D+M G N+ YN +++
Sbjct: 453 FSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNG 512
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ G IE A++L M G+ PDA TYT++++ C+ ++ A ++ + ++ +
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572
Query: 540 RSILSTFMISLC 551
+ M C
Sbjct: 573 VVTFNVLMNGFC 584
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 169/394 (42%), Gaps = 52/394 (13%)
Query: 114 KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNA 173
KI+ D Y +I QG + ++F+E+ +L+ V G + NA
Sbjct: 393 KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNA 452
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR--------ENSMING 225
+ +EM G+ + + +G I C++ +L +LDE+RK+ NSM+NG
Sbjct: 453 FSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNG 512
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
CK +E+A K++ E+ + PD I Y V + + +G + + +L+
Sbjct: 513 ----------ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQ 562
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID 345
+ G+ P + + G ++G + D
Sbjct: 563 EMLDRGLQPTVVTFNVLMNGF-----------------------------CMLGMLEDGD 593
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
+M+EKG VP T + L K C RN + ++YK + D +YN+
Sbjct: 594 R-----LLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNI 648
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++ C + L+EA+ + +EM KG P V+ YN+L++ ++ + A++L+++M G
Sbjct: 649 LIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHG 708
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+ + YN + E G++E L L +EK
Sbjct: 709 LVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 125/276 (45%), Gaps = 7/276 (2%)
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF-TIDDDVLN---A 336
E+ +K + G++ T Y I L R+ + KE +++ F + DV++
Sbjct: 243 EMAIKVFCEYGISWNTTSYNIIIYSLC---RLGKVKEAHRLLMQMDFRSSTPDVVSYSTV 299
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ G + + A+ + M KG P T +++ LCK KS E +V + + +
Sbjct: 300 IDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKI 359
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D Y ++ G +R A EM K + PD Y +L++ + + +
Sbjct: 360 IPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQN 419
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L+ +M + G + TY LI + + GE+ A L + M++ G+ P+ TY +L++GLC
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC 479
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ L A E+ ++ + L I ++ + +C+
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICK 515
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 187/408 (45%), Gaps = 40/408 (9%)
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRV 242
RG + F + + FC++ + + + +++ N +I V +I+G CKGKR+
Sbjct: 123 RGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKR--NCLIPDCVSYNTVINGLCKGKRL 180
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG----------- 291
EA ++ E++ ECKP+ + + + + F G V E +L++ K+G
Sbjct: 181 VEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSAL 240
Query: 292 ------------------------VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
V P Y + L +++ EA ++ + + K
Sbjct: 241 ISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKV 300
Query: 328 TIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
D L +S S AI + M+++G P T + + LCK + D+ +
Sbjct: 301 RPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALG 360
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK--GLDPDVSFYNSLMEA 444
+ + ++ D+ +Y+ +V LC G++ EA ++ + K + PDV +N +++
Sbjct: 361 ILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQE 420
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C++ LR AK+++ M G N+ TYNILI + G++ AL L+ + ++ G++P+
Sbjct: 421 LCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPN 480
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A TYT L+ GLC+ L A +FNK S +T M SLCR
Sbjct: 481 AATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCR 528
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 111/510 (21%), Positives = 219/510 (42%), Gaps = 50/510 (9%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY++++ L +++ + K++K + +S + +I + + ++ F + E
Sbjct: 165 VSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEE 224
Query: 145 VKFNCEDIGPE----ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+ E +G E + ++L++ S G I+ ++F+EM + V + + + + C
Sbjct: 225 M----EKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALC 280
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLII-HGFCKGKRVEEAFKVLDELRIRECKP 259
+ K + MLD + + V+A ++ G K R +A KVLD + R +P
Sbjct: 281 KKQKWKEAAQMLDTM---TGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEP 337
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
+ + Y + G V + +L+ K G P Y + GL +I EA +L
Sbjct: 338 NNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLL 397
Query: 320 EVIVSGKFTIDDDVL-------------------------------------NALI-GSV 341
+++S +F I DV N LI G +
Sbjct: 398 NLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYL 457
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
S+ A+ + ++ G P +T + L LCK ++ A+ +
Sbjct: 458 SAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVS 517
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
YN +++ LC + +A + QEM+ DPDV +N +++ + + AK+L +M
Sbjct: 518 EYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEM 577
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ T++ILI++F ++G+++ A L+ M+ G PDA + SLL+G +
Sbjct: 578 LNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKT 637
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+ + + + DV+L + ST + LC
Sbjct: 638 EKVVSMLQQMADKDVVLDSKLTSTILACLC 667
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 101/197 (51%), Gaps = 1/197 (0%)
Query: 334 LNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
L+ALI S V++ P A ++++G + + L K C+ S + ++++ ++
Sbjct: 97 LSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMK 156
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
N D SYN +++ LC RL EA + +EMK P+ +++L++ C+ +
Sbjct: 157 RNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVE 216
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
L ++M G G++ Y+ LIS F G+IE LF+ ML K V P+ TY+ L+
Sbjct: 217 EGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLM 276
Query: 513 EGLCQETNLQAAFEVFN 529
LC++ + A ++ +
Sbjct: 277 NALCKKQKWKEAAQMLD 293
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 93/191 (48%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P ++LS L ++ K V ++ + ++ ++N+++ C SG +A +
Sbjct: 92 PCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDL 151
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
MKR L PD YN+++ C+ L AK+L+ +M C N T++ LI F +
Sbjct: 152 FCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCK 211
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
G++E L M + G+ D Y++L+ G C + +++ E+FN+ + +V
Sbjct: 212 NGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVT 271
Query: 543 LSTFMISLCRR 553
S M +LC++
Sbjct: 272 YSCLMNALCKK 282
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 203/449 (45%), Gaps = 49/449 (10%)
Query: 96 LSRQINAIDSVLKQVKV---NKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDI 152
LSR N + + +KV I+ +++ Y II SL + ++A + ++ F
Sbjct: 232 LSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSST- 290
Query: 153 GPEICNSLLAVLASDGY-----IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
P++ + + DGY + ALK+ D+M +G++ + + I C+ K +
Sbjct: 291 -PDVVSYSTVI---DGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFE 346
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
+L E+ ++ +I +V+ +IHGF K V A K DE+ ++ PD+I Y +
Sbjct: 347 AEKVLREMMSQK--IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTL 404
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
+ F G V E + + + G+ P Y I C+A GE++
Sbjct: 405 IQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLI------DVYCKA---GEMV----- 450
Query: 328 TIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
+A N M++ G P + T L LCK + D E+
Sbjct: 451 --------------------NAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANEL 490
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
+ ++ YN MV+ +C +G + +A +++EM+ G+DPD Y ++++A CR
Sbjct: 491 LDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCR 550
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+ A KL +M G + T+N+L++ F +G +E RL MLEKG+ PDA T
Sbjct: 551 LGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAIT 610
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
Y +L++ C ++ +++ + N V
Sbjct: 611 YNTLMKQHCIRNSMNTTTKIYKRMRNQGV 639
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/492 (21%), Positives = 211/492 (42%), Gaps = 27/492 (5%)
Query: 64 HSLALGFFNWAS--QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVN-KITLDSS 120
++L L FF+WA ++P+ + H + S L + K+ + +
Sbjct: 116 YNLVLAFFDWARVRREPSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQF 175
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
+R I G N AF +F VL G++ A K+ D++
Sbjct: 176 THRLIYTYKYWGPNPI-AFDIF------------------FQVLVEIGHLSEARKLLDKL 216
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
G+ + F+ + N+ + + M +V N + + II+ C+
Sbjct: 217 LSYGLVVTVDSCNAFLSRIANNS---EGIEMAIKVFCEYGISWNTTSYNI-IIYSLCRLG 272
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+V+EA ++L ++ R PD ++Y V + + +G + + ++ + G+ P Y
Sbjct: 273 KVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYN 332
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEK 359
IL L + EA+++ ++S K D+ V LI + R+A +F+ M+ K
Sbjct: 333 SIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSK 392
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
P T + L + + K E ++ + + D +Y ++ C +G + A
Sbjct: 393 KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNA 452
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ + EM + G+ P++ Y +L++ C+ L A +L D+M G N+ YN +++
Sbjct: 453 FSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNG 512
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ G IE A++L M G+ PDA TYT++++ C+ ++ A ++ + ++ +
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPT 572
Query: 540 RSILSTFMISLC 551
+ M C
Sbjct: 573 VVTFNVLMNGFC 584
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 168/394 (42%), Gaps = 52/394 (13%)
Query: 114 KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNA 173
KI+ D Y +I QG + ++F+E+ +L+ V G + NA
Sbjct: 393 KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNA 452
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR--------ENSMING 225
+ +EM G+ + + +G I C++ +L +LDE+RK+ NSM+NG
Sbjct: 453 FSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNG 512
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
CK +E+A K++ E+ + PD I Y V + + +G + + +L+
Sbjct: 513 ----------ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQ 562
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID 345
+ G+ P + + G ++G + D
Sbjct: 563 EMLDRGLQPTVVTFNVLMNGF-----------------------------CMLGMLEDGD 593
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
+M+EKG VP T + L K C RN + ++YK + D +YN+
Sbjct: 594 R-----LLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNI 648
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++ C + L+EA+ + +EM KG P V+ YN+L++ ++ A++L+++M G
Sbjct: 649 LIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHG 708
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+ + YN + E G++E L L +EK
Sbjct: 709 LVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 125/276 (45%), Gaps = 7/276 (2%)
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF-TIDDDVLN---A 336
E+ +K + G++ T Y I L R+ + KE +++ F + DV++
Sbjct: 243 EMAIKVFCEYGISWNTTSYNIIIYSLC---RLGKVKEAHRLLMQMDFRSSTPDVVSYSTV 299
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ G + + A+ + M KG P T +++ LCK KS E +V + + +
Sbjct: 300 IDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKI 359
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D Y ++ G +R A EM K + PD Y +L++ + + +
Sbjct: 360 IPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQN 419
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L+ +M + G + TY LI + + GE+ A L + M++ G+ P+ TY +L++GLC
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC 479
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ L A E+ ++ + L I ++ + +C+
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICK 515
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 131/558 (23%), Positives = 238/558 (42%), Gaps = 49/558 (8%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
KW P E+ L L LR + LV V+ + ++ + FF WA+++ N+ H +Y
Sbjct: 72 KWGPDAEKALEVLMLR--VDHWLVREVMKTDIGV--NVKMQFFRWAAKRRNYEHDTSTYM 127
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKI-TLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
++++ L + Q + +++++ N I + + ++ L K KA ++F ++K
Sbjct: 128 ALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKT 187
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF-STIGFGVFIWKFCENAKLG 206
+ NS++ +L +G ++++EMS G F T+ + I FC+ +
Sbjct: 188 RKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRD 247
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+L+E+ +EN M + I ++I F K V A + +E+R + C+PD Y
Sbjct: 248 SATQLLNEM--KENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTE 305
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA----KELGEVI 322
+ G + E + ++ G P T I L R+ +A +E+G +
Sbjct: 306 LIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLR 365
Query: 323 VSGKFTIDDDVLNALIGSV---------------SSIDPRS------------------A 349
+ ++ AL S S I P S A
Sbjct: 366 CIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKA 425
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
++ M EKG P + +L L K + D E+++ L N + Y VM+
Sbjct: 426 MMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKH 485
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
L +GRL +A + EM + G PDV YN+LM R +L A +M GC +
Sbjct: 486 LGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPD 545
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ +YNI+++ ++ G A+ + NM + V PD +Y ++L L + A ++
Sbjct: 546 INSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLME 605
Query: 530 K----SVNHDVMLARSIL 543
+ +D++ SIL
Sbjct: 606 EMNTLGFEYDLITYSSIL 623
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 164/383 (42%), Gaps = 43/383 (11%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLA 162
S+ ++++ D Y +I L + +A+ F E++ E P+ + N+++
Sbjct: 286 SLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQR--EGCRPDTVVMNNMIN 343
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN-AKLGQVLSMLDEVRKRENS 221
L G +D+A+K+F EM S + + I E+ ++ +V S + R +E+
Sbjct: 344 FLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFE--RMKESG 401
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
+ S ++I GFCK R+E+A +L+E+ + P AY + +
Sbjct: 402 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLID------------ 449
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALIGS 340
L K ++ +A CE +EL E S + ++ L G
Sbjct: 450 -ALGKAKRYDLA-------------------CELFQELKENCGSSSARVYAVMIKHL-GK 488
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+D AI F+ M + G P + + L L + DE + + + + D+
Sbjct: 489 AGRLD--DAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDI 546
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
SYN++++ L +G A ++ MK+ + PDV YN+++ A + A KL ++
Sbjct: 547 NSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEE 606
Query: 461 MFASGCSGNLKTYNILISKFSEV 483
M G +L TY+ ++ +V
Sbjct: 607 MNTLGFEYDLITYSSILEAIGKV 629
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 109/265 (41%), Gaps = 5/265 (1%)
Query: 83 SPLSYHSILKSLSLSR-QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSV 141
S ++Y++I+K+L S+ + + + S +++K + I+ S Y +I + +KA +
Sbjct: 369 SVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMML 428
Query: 142 FNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
E+ P SL+ L D A ++F E+ S + V I +
Sbjct: 429 LEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGK 488
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+L ++M DE+ K + V A ++ G + ++EA + ++ C PD
Sbjct: 489 AGRLDDAINMFDEMNKLGCA---PDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPD 545
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+Y I+ G +L ++ V P Y + L EA +L E
Sbjct: 546 INSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLME 605
Query: 321 VIVSGKFTIDDDVLNALIGSVSSID 345
+ + F D ++++ ++ +D
Sbjct: 606 EMNTLGFEYDLITYSSILEAIGKVD 630
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 188/397 (47%), Gaps = 3/397 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L G ++ A ++ M G + ++ F + I +C +G+ L +LDE+ K
Sbjct: 84 NVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEK 143
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R +++ +V +I+G C K + A K+L+++ KP+ + Y + + G +
Sbjct: 144 R--NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 201
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E +L GVAP Y I L ++ EA I D A
Sbjct: 202 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 261
Query: 338 IGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I S + A +F+ M++ G +P + L K E + +++ L A
Sbjct: 262 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV 321
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+++ + + L +GR++EA V E+K KGL PDV Y+SL+ C++ + A +
Sbjct: 322 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 381
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L D+M G + N+ YN L+ + G+I+ A +LF M EKG+ PD+ TY+++++G C
Sbjct: 382 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 441
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ N+ AF +F++ + V + + + C+
Sbjct: 442 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE 478
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 196/436 (44%), Gaps = 18/436 (4%)
Query: 103 IDSVL--KQVKVN-KITLDSSVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEICN 158
ID VL K V V+ I ++ Y +I L + +KA + + C+ N
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKP------N 114
Query: 159 SLLAVLASDGY-----IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
S L +GY + AL++ DEM R + S + +G I C L +L+
Sbjct: 115 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 174
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
++ + + V+ +I G+ R+EEA ++LD + PD Y +
Sbjct: 175 KMTF--SGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSK 232
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
G + E L + + G+ P + FILG ++ EA + + ++ ++ +
Sbjct: 233 AGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPL 292
Query: 334 LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
LI G + + A+ F + G +P + T S L K + E ++V+ L
Sbjct: 293 YTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK 352
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D+ +Y+ ++S C G + +A+ + EM KG+ P++ YN+L++ C+ ++
Sbjct: 353 EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQ 412
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A+KL+D M G + TY+ +I + + + A LFH M KGV P + Y +L+
Sbjct: 413 RARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 472
Query: 513 EGLCQETNLQAAFEVF 528
G C+E +++ A +F
Sbjct: 473 HGCCKEGDMEKAMNLF 488
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/498 (22%), Positives = 218/498 (43%), Gaps = 25/498 (5%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ N S +SY +++ L + ++ + +L+++ + + + VY +I
Sbjct: 142 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 201
Query: 136 QKAFSVFNEVKFNCEDIGPEI-C-NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
++A + + +C + P+I C N++++ L+ G ++ A E+ RG++ + FG
Sbjct: 202 EEARRLLD--GMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 259
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
FI + + K+ + DE+ ++ ++ + + ++I+G K + EA + L
Sbjct: 260 AFILGYSKTGKMTEAAKYFDEML--DHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLH 317
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
PD G V E V + ++ G+ P Y I G + +
Sbjct: 318 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 377
Query: 314 EAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
+A EL + + + + NAL+ G S D + A F+ M EKG P T S +
Sbjct: 378 KAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMI 437
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
CK E ++ + + YN +V C G + +A + +EM +KG
Sbjct: 438 DGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA 497
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA--- 489
+SF N+L++ C+ ++ A +L+ +M A + TY +I + G++E A
Sbjct: 498 TTLSF-NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLL 556
Query: 490 --------------LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LF M+ KGV PD TY ++ C+E NL AF++ ++ V
Sbjct: 557 FKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKG 616
Query: 536 VMLARSILSTFMISLCRR 553
++ +I + +LC+R
Sbjct: 617 MLTKGTIHDLLITALCKR 634
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 36/320 (11%)
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
E ++ + +I G C+ KR+ EA +E++ KPD+
Sbjct: 3 EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDY----------------- 45
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
N I G + E I E + +V+VS I+ N LI
Sbjct: 46 ------------------NACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLI 87
Query: 339 GSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
+ A MI G P T L + C+ + +E+ + +
Sbjct: 88 HGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLV 147
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
SY M++ LC L A ++++M GL P+V Y++L+ E + A++L
Sbjct: 148 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRL 207
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
D M SG + ++ YN +IS S+ G++E A + +G+ PDA T+ + + G +
Sbjct: 208 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSK 267
Query: 518 ETNLQAAFEVFNKSVNHDVM 537
+ A + F++ ++H +M
Sbjct: 268 TGKMTEAAKYFDEMLDHGLM 287
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 80/151 (52%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y ++ + LC + R+ EA +EM++ GL PD + ++L++ RE + ++ D M
Sbjct: 12 TYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVM 71
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ G NL TYN+LI + G++E A + M+ G P++ T+ L+EG C+E N+
Sbjct: 72 VSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNM 131
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A E+ ++ +++ + + LC
Sbjct: 132 GRALELLDEMEKRNLVPSAVSYGAMINGLCH 162
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 78/175 (44%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M EKG VP T + ++ LC+ + +E ++ + D + + ++ G
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ E + M G+ ++ YN L+ C+ + A ++ M GC N +T+ +
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
LI + + AL L M ++ + P A +Y +++ GLC +L A ++ K
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEK 175
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 90/200 (45%), Gaps = 4/200 (2%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A + F M + G P + S L + DE++ + V+ + ++ +YNV++
Sbjct: 29 AKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIH 88
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G++ +A +++ M G P+ + L+E CRE + A +L D+M
Sbjct: 89 GLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVP 148
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ +Y +I+ ++ A +L M G+ P+ Y++L+ G E ++ A +
Sbjct: 149 SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLL 208
Query: 529 N----KSVNHDVMLARSILS 544
+ V D+ +I+S
Sbjct: 209 DGMSCSGVAPDIFCYNAIIS 228
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 114/486 (23%), Positives = 202/486 (41%), Gaps = 79/486 (16%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
LSY ++K+L + +I+ S + ++ K+ D Y +I +L + + +A F
Sbjct: 36 LSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFET 95
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ P++ N+LL L +G + A +F M G+ S + + I FC+
Sbjct: 96 MP------EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKM 149
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+ +L + R+ S S + II+G CK ++V++A+++ +E+++ CKPD +
Sbjct: 150 CQFETAYGLLQLMASRKCSPTVYSYCS--IINGLCKNRKVDQAYQLFEEMKLAGCKPDRV 207
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + I GL V++R+ EAK+L V+
Sbjct: 208 TYNTL-----------------------------------IHGLCVKQRLHEAKDLLTVM 232
Query: 323 VSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLC----- 376
V F D ALI + + D + A V F M ++G P L T + L LC
Sbjct: 233 VENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKL 292
Query: 377 ----------------------------KRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
+R D + + ++ ++ +Y
Sbjct: 293 RPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFK 352
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L AY + M +G++PD+ YN L++ C+ D L A+K+ M SG
Sbjct: 353 GLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPP 412
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ TYN L+ G++E L H M+ +G PD T+++L+ GL AA+
Sbjct: 413 NIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFL 472
Query: 529 NKSVNH 534
N +++
Sbjct: 473 NLAMSQ 478
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 126/292 (43%), Gaps = 7/292 (2%)
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
+ +R E+ V + ++CKP+ ++Y + + G + + + + + + P
Sbjct: 12 RARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVF 71
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI--GSVSSIDPRSAIVFFNF 355
Y I L RRI A E E + + +L L G V+ A F
Sbjct: 72 TYNVVIDTLCKARRISRAIEFFETMPEPDVVTYNTLLGGLCKNGRVAQ-----ACSLFGS 126
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M G P+ T + L CK + + + +++++ + SY +++ LC + +
Sbjct: 127 MEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRK 186
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ +AY + +EMK G PD YN+L+ C + L AK L M +G + T+
Sbjct: 187 VDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTA 246
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
LI I+ A LF M ++G APD T+T L+ LC L+ A V
Sbjct: 247 LIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSV 298
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 59/358 (16%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
++ C+ ++++A + E+ + PD Y +V + L K R++
Sbjct: 41 LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVID-------------TLCKARRIS 87
Query: 292 VA---------PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
A P Y + GL R+ +A L + T D LI
Sbjct: 88 RAIEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFC 147
Query: 343 SI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ +A M + PT+ + ++ LCK K D+ ++++ + D
Sbjct: 148 KMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRV 207
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN ++ LC RL EA ++ M G PD + +L+E C D ++ A L+ M
Sbjct: 208 TYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGM 267
Query: 462 FASGCSGNLKTYNILISK------------------------------FSEVGEIEG--- 488
GC+ +L T+ +L+SK F E+G G
Sbjct: 268 AKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDR 327
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV---MLARSIL 543
A RL M +GV P+ TYT+ +GL A+ F + + + M+A ++L
Sbjct: 328 AARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVL 385
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 4/196 (2%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M + VP + T + + LCK + +E ++ + D T YN ++ LC +GR
Sbjct: 61 MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEPDVVT----YNTLLGGLCKNGR 116
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ +A + M+ G+ P Y +L++ C+ A L M + CS + +Y
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
+I+ + +++ A +LF M G PD TY +L+ GLC + L A ++ V +
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENG 236
Query: 536 VMLARSILSTFMISLC 551
+ + + LC
Sbjct: 237 FQPDKITFTALIEGLC 252
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 449 DLLRPAKK------LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
DLL A++ ++ ++F+ C N +Y L+ G+I+ A M + +
Sbjct: 8 DLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLV 67
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILS 544
PD TY +++ LC+ + A E F DV+ ++L
Sbjct: 68 PDVFTYNVVIDTLCKARRISRAIEFFETMPEPDVVTYNTLLG 109
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 178/404 (44%), Gaps = 43/404 (10%)
Query: 153 GPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS 210
GP++ N+++A G +D A ++ EM VE + I C + L+
Sbjct: 123 GPDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALA 179
Query: 211 MLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
+LDE+ +R + V +++ CK ++A K+LDE+R + C PD + Y +V
Sbjct: 180 VLDEMLRRR--CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNG 237
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTI 329
G V + LK G P T Y + GL R +A+EL GE
Sbjct: 238 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGE--------- 288
Query: 330 DDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
M +KG P + T + L LC++ + +EV +
Sbjct: 289 --------------------------MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE 322
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+ + SYN ++ C ++ +A + M +G PD+ YN+L+ A CR
Sbjct: 323 QIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSG 382
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
+ A +L Q+ GC+ L +YN +I ++ G+ + AL L + M+ KG+ PD TY+
Sbjct: 383 EVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS 442
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
++ GLC+E ++ A F K + + + + ++ LC+R
Sbjct: 443 TIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKR 486
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D +YN ++ LC GR A V+ EM R+ PDV Y L+EA C+ + A KL
Sbjct: 157 DAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLL 216
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
D+M GC+ ++ TYN++++ + G ++ A+ N+ G P+ +Y +L+GLC
Sbjct: 217 DEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTA 276
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+ A E+ + + + LCR+ L+
Sbjct: 277 ERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLV 314
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 51/273 (18%), Positives = 108/273 (39%), Gaps = 16/273 (5%)
Query: 27 ARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP-- 84
A +W E+ + ++G + P++V + L L Q P + +P
Sbjct: 276 AERWEDA-EELMGEMG-QKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNS 333
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
LSY+ +L + ++++ + L + D Y ++ +L + A + ++
Sbjct: 334 LSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 393
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+K + P + N+++ L G AL++ +EM +G++ I + C
Sbjct: 394 LKD--KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRE 451
Query: 203 AKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
++ + +V+ R N+++ + II G CK + A + + C P
Sbjct: 452 DRIEDAIRAFGKVQDMGIRPNTVLYNA-----IILGLCKRRETHSAIDLFAYMIGNGCMP 506
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
+ Y I+ E G + E +L + GV
Sbjct: 507 NESTYTILIEGLAYEGLIKEARDLLDELCSRGV 539
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 128/560 (22%), Positives = 244/560 (43%), Gaps = 53/560 (9%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
KW P E+ L L L+ + LV V+ + ++ + FF WA+++ N+ H +Y
Sbjct: 68 KWGPDAEKALEVLMLK--VDHWLVREVMKTDVGV--NVKMQFFRWAAKKRNYEHDTSTYM 123
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSV-YRFIIPSLIQGKNTQKAFSVFNEVKF 147
++++ L + Q + +++++ N + + + + II L K KA ++F ++K
Sbjct: 124 ALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKV 183
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF-STIGFGVFIWKFCENAKLG 206
+ NS++ +L +G + ++++EMS+ G F T+ + I FC+ +
Sbjct: 184 RKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQD 243
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ +L+E+ ++N M + I ++I F K V A + +E+R + C+PD Y
Sbjct: 244 SAIRLLNEM--KDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTE 301
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA----KELGEVI 322
+ G E + R+ G P T I L R+ +A +E+G +
Sbjct: 302 LIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQ 361
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+ ++ AL S S I S+ +F M G P+ T S L CK N+++
Sbjct: 362 CIPSVVTYNTIIKALFESKSRISEISS--WFERMKGSGISPSPFTYSILIDGFCKTNRTE 419
Query: 383 ELV-----------------------------------EVYKVLSANDYFTDMESYNVMV 407
+ + E+++ L N + Y VM+
Sbjct: 420 KAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMI 479
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
L +GRL +A + EM + G P+V YN+LM R +L A +M GC
Sbjct: 480 KHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCI 539
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
++ +YNI+++ ++ G A+ + NM + + PDA +Y ++L + + A ++
Sbjct: 540 PDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKL 599
Query: 528 FNK----SVNHDVMLARSIL 543
+ +D++ SIL
Sbjct: 600 MKEMNVLGFEYDLITYSSIL 619
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 148/337 (43%), Gaps = 10/337 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALK 175
D Y +I L + +A++ F+E++ E P+ + N+++ L G +D+A+K
Sbjct: 295 DVFTYTELIRGLGKAGRFDEAYNFFHEMRR--EGCRPDTVVINNMINFLGKAGRLDDAVK 352
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCEN-AKLGQVLSMLDEVRKRENSMINGSVIAVLIIH 234
+F+EM S + + I E+ +++ ++ S + R + + + ++I
Sbjct: 353 LFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFE--RMKGSGISPSPFTYSILID 410
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAY-RIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
GFCK R E+A +L+E+ + P AY ++ K E+ + K G +
Sbjct: 411 GFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCG-S 469
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVF 352
Y I L R+ +A L + + T + NAL+ ++ A+
Sbjct: 470 SSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTT 529
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
M E G +P +++ + + L K +E+ + + D SYN ++ +
Sbjct: 530 MRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSH 589
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+G EA +++EM G + D+ Y+S++EA + D
Sbjct: 590 AGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGKVD 626
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 198/453 (43%), Gaps = 16/453 (3%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++ +++ LS + +I A + K ++ + + VY +I L + + A + +
Sbjct: 127 VTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQ 186
Query: 145 VK--FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+K F D N L+ L G ++ A FDEM G + + + I FC+
Sbjct: 187 MKKAFCTPDTITY--NVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKA 244
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV----LIIHGFCKGKRVEEAFKVLDELRIRECK 258
L + + ING I + I+ K K++EEA +++++ C
Sbjct: 245 GNTDAASHSL-----AQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCT 299
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
P Y + MG + E +L+K G P Y I GL E+R EA +L
Sbjct: 300 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 359
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSID--PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+ + +D ALI + P+++ V+ M G VP + TLS + L
Sbjct: 360 FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVY-KTMTSHGCVPDVVTLSTMIDGLS 418
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K + V ++K + A + Y+ ++ LC + ++ A ++ +MK+ PD
Sbjct: 419 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 478
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN L++ C+ + A+ +D+M +GC ++ TYNILIS F + G + A +F +M
Sbjct: 479 TYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDM 538
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ + TY +L+ GLC+ L A F
Sbjct: 539 SSSRCSANVVTYGALISGLCKRRQLTKASLYFQ 571
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/513 (24%), Positives = 218/513 (42%), Gaps = 45/513 (8%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
T ++Y S++ L ++ + K++ + + LD+ Y +I L+Q +A S
Sbjct: 53 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASS 112
Query: 141 VFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
V+ + + P++ ++++ L+ G I A+++F M RG+ + + + I
Sbjct: 113 VYKTMTSH--GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 170
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C+ K+ L ML +++K + ++ ++I G CK VE A DE+ CK
Sbjct: 171 LCKARKMDCALEMLAQMKKAFCT--PDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCK 228
Query: 259 PDFIAYRI-----------------VAEEFKLMGSVFEREVV------LKKKRKL----- 290
PD Y I +A+E + G + L K +K+
Sbjct: 229 PDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVA 288
Query: 291 --------GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
G P Y + GL R+ EA +L IV T D +LI +
Sbjct: 289 LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 348
Query: 343 SIDPRS--AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ RS A F M +G + L + L + K + VYK ++++ D+
Sbjct: 349 K-EKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDV 407
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+ + M+ L +GR+ A + + M+ +GL P+ Y++L+ C+ + A ++ Q
Sbjct: 408 VTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQ 467
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M + C+ + TYNILI + G++E A F MLE G PD TY L+ G C+ N
Sbjct: 468 MKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGN 527
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
AA VF+ + + LC+R
Sbjct: 528 TDAACGVFDDMSSSRCSANVVTYGALISGLCKR 560
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 199/453 (43%), Gaps = 6/453 (1%)
Query: 81 THSPLSYHSILKSLS-LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
T + +Y+++L L + R AID +L+++ N T D Y +I L + K + +A+
Sbjct: 18 TPTIATYNALLNGLCKMGRLEEAID-LLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 76
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+F E+ + +L+ L G I A ++ M+ G + I
Sbjct: 77 KLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 136
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ ++G + + + R + V+ +IHG CK ++++ A ++L +++ C P
Sbjct: 137 SKAGRIGAAVRIFKSMEAR--GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 194
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE-L 318
D I Y ++ + G V + + G P Y I G A L
Sbjct: 195 DTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSL 254
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ TID A++ ++ A+ + G PT++T + L LCK
Sbjct: 255 AQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCK 314
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ +E +++ + + N D+ +Y ++ L R EAY + +EM +GL D
Sbjct: 315 MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVC 374
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
Y +L+ + + A ++ M + GC ++ T + +I S+ G I A+R+F +M
Sbjct: 375 YTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSME 434
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+G+AP+ Y++L+ GLC+ + A E+ +
Sbjct: 435 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQ 467
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 184/419 (43%), Gaps = 10/419 (2%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE-V 145
Y +++ L +R+++ +L Q+K T D+ Y +I L + + + A + F+E +
Sbjct: 164 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEML 223
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNAL-KMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ C+ P++ N L++ G D A + E + G + + +N
Sbjct: 224 EAGCK---PDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKN 280
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
K+ + +++++++ + + A+L +G CK R+EEA +L ++ C PD +
Sbjct: 281 KKIEEAVALMEKITANGCTPTIATYNALL--NGLCKMGRLEEAIDLLRKIVDNGCTPDVV 338
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + FE + K+ G+A T Y I L+ +I +A + + +
Sbjct: 339 TYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTM 398
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
S D L+ +I +S A V F M +G P S L LCK K
Sbjct: 399 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 458
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
D +E+ + D +YN+++ LC SG + A EM G PDV YN L
Sbjct: 459 DCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 518
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+ C+ A ++D M +S CS N+ TY LIS + ++ A F +M E+G
Sbjct: 519 ISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 142/332 (42%), Gaps = 39/332 (11%)
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
++EEA +++++ C P Y + MG + E +L+K G P Y
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID--PRSAIVFFNFMIE 358
I GL E+R EA +L + + +D ALI + P+++ V + M
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSV-YKTMTS 119
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
G VP + TLS + L K + V ++K + A + Y+ ++ LC + ++
Sbjct: 120 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 179
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A ++ +MK+ PD YN L++ C+ + A+ +D+M +GC ++ TYNILIS
Sbjct: 180 ALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 239
Query: 479 KFSEVG------------------------------------EIEGALRLFHNMLEKGVA 502
F + G +IE A+ L + G
Sbjct: 240 GFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCT 299
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
P TY +LL GLC+ L+ A ++ K V++
Sbjct: 300 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDN 331
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 85/173 (49%)
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K +E V + + ++AN + +YN +++ LC GRL EA +++++ G PDV Y
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
SL++ +E A KL+ +M G + + Y LI + + G+I A ++ M
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
G PD T +++++GL + + AA +F + + S + LC+
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 173
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 123/558 (22%), Positives = 237/558 (42%), Gaps = 48/558 (8%)
Query: 4 RPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVIN-----P 58
RPA +A+ + I++ R R+W ++ LSPS+ A + P
Sbjct: 9 RPAAAVASTSTPDIVAELGRVLSTRRW--------NKGSAYKRLSPSVTAAHVADLFRAP 60
Query: 59 YLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQI------------------ 100
+ AL FF W +++P F H+ S+ ++L+ L+ R
Sbjct: 61 VSPLDPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVLSMISCSGTAE 120
Query: 101 ---NAIDSV--LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
A+D++ +++V ++ L Y + SL++ T+ +++ + E + P+
Sbjct: 121 DVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQ--EGLLPD 178
Query: 156 IC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ---VLS 210
N+++ G + A + F + G++ T + +C + L + +L
Sbjct: 179 TVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLM 238
Query: 211 MLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
M+ + R N ++I G + + V EA ++ + C + Y ++ +
Sbjct: 239 MMPLMGCRRNE-----YSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKG 293
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
G + + +L + GV P Y I G R+ +A + ++ D
Sbjct: 294 LCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPD 353
Query: 331 DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
D N+LI + A N I +G PT+ T +NL CK + D+ + V
Sbjct: 354 DWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSN 413
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ +++ D+++Y V+++ L RL+EA + EM GL P+V Y S+++ C+ +
Sbjct: 414 MISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGM 473
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ A +++ M GC N TY LI + ++ A+ L M E G+ P YT+
Sbjct: 474 VGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTT 533
Query: 511 LLEGLCQETNLQAAFEVF 528
L++G C++ AF +F
Sbjct: 534 LIQGQCKKHEFDNAFRLF 551
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/465 (22%), Positives = 192/465 (41%), Gaps = 38/465 (8%)
Query: 122 YRFIIPSLIQGKNTQKAFS-VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
Y +I L + + ++A VF V+ C + + L+ L +G I +A + DEM
Sbjct: 252 YTILIQGLYEARCVREALVLVFMMVQDGCS-LNLHMYTLLIKGLCKEGRIHDARGLLDEM 310
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSM---------------------------LD 213
RGV S + I +C++ ++ L + LD
Sbjct: 311 PLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLD 370
Query: 214 EVRKRENSMINGSVIAVLI-----IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVA 268
E + N I +I I+G+CK +R+++A +V + CK D AY ++
Sbjct: 371 EAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLI 430
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFT 328
+ E + L + G+AP Y I G + A E+ +++
Sbjct: 431 NVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCH 490
Query: 329 IDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
+ +LI G + A+ M E G P + + L + CK+++ D +
Sbjct: 491 PNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRL 550
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
++++ N D ++YNV+ LC SGR EAY + RKG+ Y SL++ +
Sbjct: 551 FEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSK 607
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
A L ++M GC +L TY++L+ + ++ AL + M GV +
Sbjct: 608 AGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVA 667
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
YT ++ + +E A +FN+ ++ + + + F+ S C+
Sbjct: 668 YTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCK 712
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 108/520 (20%), Positives = 198/520 (38%), Gaps = 103/520 (19%)
Query: 103 IDSVLKQVKVNKIT----LDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN 158
ID L+ VK N I+ LD Y +I LI+ ++A NE+ N I
Sbjct: 404 IDDALR-VKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYT 462
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
S++ G + AL++F M H G + +G I+ ++ KL + ++++ + +
Sbjct: 463 SIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALI--TKMQ 520
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV---------AE 269
E+ + G + +I G CK + AF++ + + PD AY ++ AE
Sbjct: 521 EDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAE 580
Query: 270 E-----------------------FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
E F G+ V+++K G Y + L
Sbjct: 581 EAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQAL 640
Query: 307 IVERRICEAKE-LGEVIVSG------KFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
++++ EA L ++ VSG +TI +++ +I +S FN MI
Sbjct: 641 CKQKKLNEALSILDQMTVSGVKCNIVAYTI---IISEMIKEGKHDHAKS---LFNEMISS 694
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS----------- 408
G P+ +T + + CK + +E + + + D+ +Y++ ++
Sbjct: 695 GHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRA 754
Query: 409 -----------------------------------FLCTSG-----RLREAYGVIQEMKR 428
++ TSG L + +++ M +
Sbjct: 755 FSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMK 814
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
GL+P V Y+S++ C+ L A L D M S N + Y +LI ++
Sbjct: 815 HGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGK 874
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ +M+E G P +Y L+ GLC E + A +F
Sbjct: 875 DVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLF 914
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/466 (18%), Positives = 184/466 (39%), Gaps = 40/466 (8%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
Q+ T ++Y ++++ + + + + ++ N +T D Y + +L +
Sbjct: 520 QEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRA 579
Query: 136 QKAFS-------VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFS 188
++A+S V +V + SL+ + G D A + ++M + G +
Sbjct: 580 EEAYSFLVRKGVVLTKVTYT----------SLVDGFSKAGNTDFAAVLIEKMVNEGCKAD 629
Query: 189 TIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGFCKGKRVEEAFK 247
+ V + C+ KL + LS+LD++ S + +++A +II K + + A
Sbjct: 630 LYTYSVLLQALCKQKKLNEALSILDQMTV---SGVKCNIVAYTIIISEMIKEGKHDHAKS 686
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL- 306
+ +E+ KP Y + + +G + E E ++ + + GV P Y FI G
Sbjct: 687 LFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCG 746
Query: 307 ----------IVERRI---CEAKELGEVIVSGKFTIDDDVLNALI----GSVSSIDPRSA 349
++R + CE ++ F + ++NA G + I+ +
Sbjct: 747 HMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHF-LKMSLINAHYIDTSGMWNWIELNTV 805
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
M++ G PT+ T S++ CK + +E + + + E Y +++
Sbjct: 806 WQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKC 865
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
C + + +M G P + Y+ L+ C E AK L+ + + N
Sbjct: 866 CCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHN 925
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ IL + G ++ +L M + D+ +Y+ L + +
Sbjct: 926 EVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSI 971
>gi|357119238|ref|XP_003561352.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Brachypodium distachyon]
Length = 732
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 127/517 (24%), Positives = 234/517 (45%), Gaps = 37/517 (7%)
Query: 25 RPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP 84
R ++W P + L +L + P+LVA V++ + LAL FF+WA +Q F H
Sbjct: 108 RRHQRWGPPVVADLSKL---RRVPPTLVAEVLSAHPPPPPPLALPFFHWAGRQKGFRHCF 164
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++H++ LS + A D + ++ + + ++ + +A
Sbjct: 165 PAFHALASLLSAAGLPAAADQLPDLIRAHGKPVSHPQLTLLVRLHTAARRPLRALYTLR- 223
Query: 145 VKFNCE-DIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+F E + P++ CN +L LA+ G++++ALK+FDEMS GV + F + +
Sbjct: 224 -RFRHEFSVQPQVHACNRVLGALAAAGHVEDALKLFDEMSEGGVRPMPVTFAIIVRALGH 282
Query: 202 NAKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
++L M+ +R R + + +++ ++ G +E +V +E+ +
Sbjct: 283 AGMTERILEMIGRMRDEVCRPDVFVYTALVKTMMRRG-----HIEGCIRVWEEMGTDGVE 337
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD +AY + G V + + ++ RK G+ + + G + + R+ + +
Sbjct: 338 PDAMAYATMVGGLCNAGMVEQAAKLFEEMRKKGLLVDRTVFASLVDGYVADGRVGDGCRV 397
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ +V + D N LIG + I A F ++++ VP+ T+S L +C
Sbjct: 398 LKEMVDAGYRADLGTYNTLIGGLCGIGREDKAYKMFQIILQEELVPSSETVSQLL--VCY 455
Query: 378 RNKS---------DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+K D+LVE+ L A DY D + F C GR +A V M++
Sbjct: 456 ADKGEMIKIFGLVDKLVELR--LPATDYLVDF-----LKLFACKDGRELKAVEVFDTMRQ 508
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS-GCSGNLKTYNILISKFSEVGEIE 487
+G VS YN ++E + + A L+++M S C TY+ +I F E G IE
Sbjct: 509 RGYY-SVSTYNIIIENLLKIKERKKALLLFEEMQGSDDCKPESCTYSHMIPCFVEEGNIE 567
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
A +++M++ P + Y SL++GLC+ + AA
Sbjct: 568 EACSCYNSMMKAEWIPSISAYCSLVKGLCKIGEINAA 604
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 83/171 (48%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + + L K + +R + + V++ + + D +Y MV LC +G + +A +
Sbjct: 303 PDVFVYTALVKTMMRRGHIEGCIRVWEEMGTDGVEPDAMAYATMVGGLCNAGMVEQAAKL 362
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+EM++KGL D + + SL++ + + ++ +M +G +L TYN LI
Sbjct: 363 FEEMRKKGLLVDRTVFASLVDGYVADGRVGDGCRVLKEMVDAGYRADLGTYNTLIGGLCG 422
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
+G + A ++F +L++ + P + T + LL + + F + +K V
Sbjct: 423 IGREDKAYKMFQIILQEELVPSSETVSQLLVCYADKGEMIKIFGLVDKLVE 473
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 101/226 (44%), Gaps = 3/226 (1%)
Query: 326 KFTIDDDV--LNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+F++ V N ++G++++ A+ F+ M E G P T + + + L ++
Sbjct: 228 EFSVQPQVHACNRVLGALAAAGHVEDALKLFDEMSEGGVRPMPVTFAIIVRALGHAGMTE 287
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
++E+ + D+ Y +V + G + V +EM G++PD Y +++
Sbjct: 288 RILEMIGRMRDEVCRPDVFVYTALVKTMMRRGHIEGCIRVWEEMGTDGVEPDAMAYATMV 347
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
C ++ A KL+++M G + + L+ + G + R+ M++ G
Sbjct: 348 GGLCNAGMVEQAAKLFEEMRKKGLLVDRTVFASLVDGYVADGRVGDGCRVLKEMVDAGYR 407
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
D TY +L+ GLC A+++F + +++ + +S ++
Sbjct: 408 ADLGTYNTLIGGLCGIGREDKAYKMFQIILQEELVPSSETVSQLLV 453
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 65/150 (43%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
++ ++V L +G +I M+ + PDV Y +L++ R + ++W++M
Sbjct: 272 TFAIIVRALGHAGMTERILEMIGRMRDEVCRPDVFVYTALVKTMMRRGHIEGCIRVWEEM 331
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G + Y ++ G +E A +LF M +KG+ D T + SL++G + +
Sbjct: 332 GTDGVEPDAMAYATMVGGLCNAGMVEQAAKLFEEMRKKGLLVDRTVFASLVDGYVADGRV 391
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLC 551
V + V+ +T + LC
Sbjct: 392 GDGCRVLKEMVDAGYRADLGTYNTLIGGLC 421
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 55/136 (40%)
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
LR Y + + + P V N ++ A + A KL+D+M G T+ I
Sbjct: 216 LRALYTLRRFRHEFSVQPQVHACNRVLGALAAAGHVEDALKLFDEMSEGGVRPMPVTFAI 275
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
++ G E L + M ++ PD YT+L++ + + +++ V+ +
Sbjct: 276 IVRALGHAGMTERILEMIGRMRDEVCRPDVFVYTALVKTMMRRGHIEGCIRVWEEMGTDG 335
Query: 536 VMLARSILSTFMISLC 551
V +T + LC
Sbjct: 336 VEPDAMAYATMVGGLC 351
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 214/466 (45%), Gaps = 6/466 (1%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
+A FF W Q S + ++++ L ++R+ N + VL +V+ ++ L ++ +
Sbjct: 1 MAYKFFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIEL 60
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
+K+ ++ + + NSL+ GY AL ++ M G+
Sbjct: 61 ARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGL 120
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEE 244
T F V + F + ++ V + +E+ +N + +VI ++I CK VE+
Sbjct: 121 RPDTYTFNVLMNAFKKAKRVDSVWKLFEEM---QNQNCSPNVITYSILIDAVCKCGGVEK 177
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A KV +++ R C+P+ Y + + G V + + ++ G+ Y I
Sbjct: 178 ALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIH 237
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVP 363
GL R A +L ++S D +L+ + S A F + G
Sbjct: 238 GLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCAL 297
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
++ + L LCK + DE E++ L + D+ ++N ++ LC SGR+ +A+ ++
Sbjct: 298 DVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILL 357
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+MKR G PDV+ YN+L++ + + A +L +M + G ++ TYN LI + +
Sbjct: 358 GDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKG 417
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
G IE ALRLF + KG A + TY ++L GLC + A+++FN
Sbjct: 418 GRIEDALRLFEEISAKGFA-NTVTYNTILNGLCMAGRVDEAYKLFN 462
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 88/168 (52%)
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
VE K + + +YN ++ +G ++A V + M + GL PD +N LM A
Sbjct: 74 VEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNA 133
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
+ + KL+++M CS N+ TY+ILI + G +E AL++F +M +G P+
Sbjct: 134 FKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPN 193
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
TYTS+++GL + ++ AF +F + + ++ R + ++ + L R
Sbjct: 194 IFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGR 241
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/426 (21%), Positives = 172/426 (40%), Gaps = 76/426 (17%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLA 165
LK+++ ++ L +S Y +I + ++ TQKA +V+ + + N L+
Sbjct: 76 ALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFK 135
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE------ 219
+D+ K+F+EM ++ + I + + I C+ + + L + +++ R
Sbjct: 136 KAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIF 195
Query: 220 --NSMING-------------------------SVIAVLIIHGFCKGKRVEEAFKVLDEL 252
SMI+G V+ +IHG + R + A K+ E+
Sbjct: 196 TYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREM 255
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
+ +PD + + + + G E + ++ R +G A N Y I L +R+
Sbjct: 256 LSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRL 315
Query: 313 CEAKEL-GEVIVSGKFTIDDDVLNAL----------------IGSVSSIDPRSAIVFFNF 355
EA E+ GE+ G D NAL +G + + +N
Sbjct: 316 DEAWEIFGELEEDG-LVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNT 374
Query: 356 MIE----KGRV----------------PTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
+I+ GRV P + T + L CK + ++ + +++ +SA
Sbjct: 375 LIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKG 434
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG----LDPDVSFYNSLMEACCREDLL 451
F + +YN +++ LC +GR+ EAY + MK++ +DPD Y +L+ + L
Sbjct: 435 -FANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLS 493
Query: 452 RPAKKL 457
A L
Sbjct: 494 ELANSL 499
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 1/219 (0%)
Query: 335 NALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N+LI + V + + A+ + M + G P T + L K + D + ++++ +
Sbjct: 93 NSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQN 152
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ ++ +Y++++ +C G + +A V +MK +G P++ Y S+++ + +
Sbjct: 153 QNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDK 212
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A L+++M + G YN LI G + A +LF ML KG+ PD T+TSL+
Sbjct: 213 AFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVY 272
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
GL A +F ++ + L ++ + + +LC+
Sbjct: 273 GLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCK 311
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 83/167 (49%)
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
T S ++L K + + + VY+V+ + D ++NV+++ + R+ + +
Sbjct: 88 TASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLF 147
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+EM+ + P+V Y+ L++A C+ + A K++ M + GC N+ TY +I +
Sbjct: 148 EEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKS 207
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
G ++ A LF M +G+ Y SL+ GL + AA ++F +
Sbjct: 208 GHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFRE 254
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/513 (21%), Positives = 209/513 (40%), Gaps = 65/513 (12%)
Query: 75 SQQPNFTHSPLSYH-SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
S PN + H + ++ L+ + ++ + L+++++ + I + +
Sbjct: 45 SPAPNAGEALARAHEATVRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAG 104
Query: 134 NTQKAFSVFNEVKFNCEDIGP--EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+A F + + P + N LL L + + + ++D M GVE +
Sbjct: 105 AADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYT 164
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRK---RENSMINGSVIAVL----------------- 231
+ + I C+N ++G MLDE+ + R + + + ++I+ L
Sbjct: 165 YNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMT 224
Query: 232 --------IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
++H C R+ E F V+DE+ R +PD +AY + F + +
Sbjct: 225 PVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAI 284
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
L + G P + V+V G F DD ++ +G
Sbjct: 285 LARMVTEGCVPNVQTF--------------------TVLVKGFF--DDGKVHDALG---- 318
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+N+M+ +G P+ + + L + LC + V+ + +D D+ +Y
Sbjct: 319 --------MWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTY 370
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+ ++ +G L A + +M G P+V Y ++++ C++ + A+ L D+M
Sbjct: 371 STLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSL 430
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
C N T+N LI ++G AL +FH M G P+ TY LL GL +E N +
Sbjct: 431 ENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCED 490
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
A + + +NH L+ +T + LC+ +I
Sbjct: 491 ALRMLTEMLNHGFELSLVSYNTTISGLCQMRMI 523
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/477 (19%), Positives = 185/477 (38%), Gaps = 45/477 (9%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
A +PN +Y+ ++K+L + ++ A +L ++ D + II +L +
Sbjct: 156 AGVEPNV----YTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLD 211
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
+A + E+ +G N+++ L + + DEM HRG+ T+ +
Sbjct: 212 RLDEARGILAEMT----PVGASY-NAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYT 266
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI--------------------- 232
+ FC+ +L ++L + E + N VL+
Sbjct: 267 SIVGAFCKARELRMACAILARMVT-EGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVA 325
Query: 233 -------------IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
I G C ++ A V + +C PD Y + + F G +
Sbjct: 326 EGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDV 385
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+ G P Y + L + +A+ L + + + N LI
Sbjct: 386 AMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIR 445
Query: 340 SVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
S+ + A+ F+ M G P T + L L + ++ + + + + +
Sbjct: 446 SLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFEL 505
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+ SYN +S LC ++EA ++ M +G+ PD +N+++ A C+E +R A +
Sbjct: 506 SLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWML 565
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+M A C N+ Y L+S +++ A+ ML +G+ P+ T+ L+ G+
Sbjct: 566 GRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGI 622
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 137/579 (23%), Positives = 241/579 (41%), Gaps = 48/579 (8%)
Query: 14 SQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLS---PSLVARVINPYLLTHHSLALGF 70
+ + + +N +W LL + LR SL+ P + +++ L S+ L
Sbjct: 41 NDTVFNNTNGLDSGTEWERLL-KPFDLPELRTSLTRITPYQLCKLLELPLDVPTSMEL-- 97
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
F WA Q + H Y+ ++ L + + ID++L Q+K I S++ I+
Sbjct: 98 FQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYG 157
Query: 131 QGKNTQKAFSVFNEVK--FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFS 188
+ +A + +++ ++CE N +L VL + +F EM +G+ +
Sbjct: 158 RAGLPGQATRLLLDMRGVYSCEPTFRSY-NVVLDVLLAGNCPKVVPNVFYEMLSKGISPT 216
Query: 189 TIGFGVFIWKFCENAKLGQVLSMLDEVRKR---ENSMINGSVIAVLI------------- 232
FGV + C ++ ++L ++ + N+++ ++I L
Sbjct: 217 VYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLE 276
Query: 233 -----------------IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
IHG CK R+ EA K++D + +R P+ Y ++ MG
Sbjct: 277 EMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMG 336
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE-LGEVIVSGKFTIDDDVL 334
V E ++L K P + I G + R+ EAK + E ++S D
Sbjct: 337 KVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTY 392
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N LI G SA N M KG P + T + L CK + +E V +S
Sbjct: 393 NTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 452
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ YN ++S LC ++++A + +M KG PD+ +NSL+ C+ +
Sbjct: 453 KGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEE 512
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A L+ M G N TYN LI F G ++ AL+L ++ML +G D TY L++
Sbjct: 513 ALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIK 572
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
LC+ N++ +F ++ + + + LCR
Sbjct: 573 ALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCR 611
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 193/413 (46%), Gaps = 14/413 (3%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
FT + +Y ++ L +++ +L +V + L + +I + +A
Sbjct: 318 FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVL----FNTLINGYVSRGRLDEAK 373
Query: 140 SVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
+V +E + GP+I N+L+ L GY+ +A ++ +EM +G E + I + + I
Sbjct: 374 AVMHESMLSV-GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILID 432
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
+FC+ +L + ++LDE+ + ++ +V +I CK ++V++A + ++ + C
Sbjct: 433 RFCKEGRLEEARNVLDEMSGKGLAL--NAVGYNCLISALCKDEKVQDALNMFGDMSSKGC 490
Query: 258 KPDFIAYRIVAEEFKLMG-SVFEREVVLKKKRKL-GVAPRTNDYREFILGLIVERRICEA 315
KPD + + F L + FE + L + L GV T Y I + + EA
Sbjct: 491 KPDIFTFNSLI--FGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEA 548
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+L ++ +DD N LI ++ + + + F M+ KG P + + L
Sbjct: 549 LKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING 608
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LC+ +E + + D+ +YN +++ LC +GR +EA + +++ +G+ PD
Sbjct: 609 LCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPD 668
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
YN+L+ C+E + A L + SG N T+ IL+S F + G+ E
Sbjct: 669 AITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 178/366 (48%), Gaps = 15/366 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N +L L S G AL++ +M + + + I FC ++ L ++ E+R+
Sbjct: 492 NIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREMRE 547
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR-ECKPDFIAYRIV----AEEFK 272
R N +I G+CK RV+EA KV DE+ + E KP+ + Y + ++ K
Sbjct: 548 RGGIAPNQYTYGT-VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 606
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
L ++ R+ ++++ GVA Y + L ++ R EA EL E + D
Sbjct: 607 LDTALLYRDRMVER----GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 662
Query: 333 VLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
N LI G + + A+ F M +G T+ T + L L K+ + E +++
Sbjct: 663 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 722
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
D+ YN +++ TSG + A+ ++ EM++K + PD YN+LM C +
Sbjct: 723 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 782
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A+KL D+M G +L TYN LIS +S G+++ ALR+ + M+ KG P TY +L
Sbjct: 783 DEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 842
Query: 512 LEGLCQ 517
++GLC+
Sbjct: 843 IQGLCK 848
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 171/419 (40%), Gaps = 81/419 (19%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A +F +M + T F + + C K + L +L ++ R N++ +VIA
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM-PRPNAVTYNTVIA--- 527
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
GFC RV+ A ++ E+R R G+
Sbjct: 528 --GFCSRGRVQAALDIMREMRERG----------------------------------GI 551
Query: 293 APRTNDYREFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRS 348
AP Y I G R+ EA K E++ G+ + + NALIG +D +
Sbjct: 552 APNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLD--T 609
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+++ + M+E+G T++T + L L + E E+ + + D+ +YN++++
Sbjct: 610 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 669
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG--- 465
C G +++A + + M R+G+ V Y +L+ A ++ ++ KL+D+ G
Sbjct: 670 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 729
Query: 466 -------------CSGNLK-------------------TYNILISKFSEVGEIEGALRLF 493
SGN+ TYN L+ +G ++ A +L
Sbjct: 730 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 789
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M E+G+ PD TY +L+ G + +++ A + N+ +N + + LC+
Sbjct: 790 DEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 848
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/371 (19%), Positives = 155/371 (41%), Gaps = 11/371 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKV-NKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
++Y++++ ++ A ++++++ I + Y +I + +A VF+
Sbjct: 520 VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD 579
Query: 144 EVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
E+ E + PE + N+L+ G +D AL D M RGV + + + +
Sbjct: 580 EMLTKGE-VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM 638
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ + + +++E+ + + ++I+G CK V++A ++ + + R +
Sbjct: 639 DGRGTEAYELVEEMGGK--GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 696
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ Y + G V E + + + + G+ P Y I I A E+
Sbjct: 697 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 756
Query: 322 IVSGKFTIDDDVLNALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ + DD N L+ + +D A + M E+G P L T + L +
Sbjct: 757 MEKKRIAPDDVTYNTLMRGLCLLGRVD--EARKLIDEMTERGIQPDLVTYNTLISGYSMK 814
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+ + + + + + +YN ++ LC +G+ +A +++EM G+ PD S Y
Sbjct: 815 GDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 874
Query: 439 NSLMEACCRED 449
SL+E ED
Sbjct: 875 ISLIEGLTTED 885
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 111/263 (42%), Gaps = 2/263 (0%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+ ++ +L + + +++++ + D Y +I + N +KA +F +
Sbjct: 628 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM 687
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+L+ L+ G + K+FDE RG+ + + I + +
Sbjct: 688 SRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNI 747
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ ++ E+ K+ + V ++ G C RV+EA K++DE+ R +PD + Y
Sbjct: 748 DRAFEIMGEMEKKR--IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYN 805
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + + G V + + + G P Y I GL + +A+ + + +V
Sbjct: 806 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 865
Query: 326 KFTIDDDVLNALIGSVSSIDPRS 348
T DD +LI +++ D R+
Sbjct: 866 GITPDDSTYISLIEGLTTEDERA 888
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 205/448 (45%), Gaps = 41/448 (9%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE- 144
++ +LKS ++ + +Q+ N I+ D Y +I + +A ++ E
Sbjct: 10 TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEM 69
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
V E P I NSLL + + A+++F M+ +G E + + I C+
Sbjct: 70 VSVGLE---PSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKT 126
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
K+ + L ML + E +V +I+G CK + +E A+K+L+E+ + PD I
Sbjct: 127 GKVTEALEMLFH-KMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + MG V E + G +P Y + L E + EA +L
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL---- 241
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
F +I KG +P T +++ L +++ D
Sbjct: 242 ------------------------------FKDVIAKGYMPDTVTYNSILLGLARKSNMD 271
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E E++K + A+ + +Y++++S C + ++ +A+ V++EM + G PDV YN L+
Sbjct: 272 EAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILL 331
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+ C+ +L+ A +L+ M +GC+ ++ +Y+++++ + ++ A LF M+E+ +
Sbjct: 332 DGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLV 391
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNK 530
PD T+ L++GLC+ L A ++ ++
Sbjct: 392 PDVVTFNILMDGLCKAGKLDEAKDLLDQ 419
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 151/306 (49%), Gaps = 12/306 (3%)
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+REC P+ +R+V + F G + + + ++ G++P +Y I G + R+
Sbjct: 1 MRECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVD 60
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
EA L E +VS N+L+ + + A+ F M EKG P + T S +
Sbjct: 61 EANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTII 120
Query: 373 KNLCKRNKSDELVEV--YKVL----SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
LCK K E +E+ +K++ SAN +YN +++ LC + AY +++EM
Sbjct: 121 SGLCKTGKVTEALEMLFHKMIERGCSANTV-----AYNALINGLCKDENIERAYKLLEEM 175
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
KG PD YN+++ CR + AK+ +D M + G S ++ YN L+ + G+
Sbjct: 176 ASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKT 235
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
+ A++LF +++ KG PD TY S+L GL +++N+ A E+F K V + S
Sbjct: 236 DEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIV 295
Query: 547 MISLCR 552
+ CR
Sbjct: 296 LSGHCR 301
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 185/400 (46%), Gaps = 14/400 (3%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
+L G + + K+F++M G+ I + + I + AK G+V DE +
Sbjct: 14 VLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGY---AKKGRV----DEANRLY 66
Query: 220 NSMINGSVIAVL-----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
M++ + + +++ FCK +++EA ++ + + +PD + Y +
Sbjct: 67 EEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKT 126
Query: 275 GSVFER-EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
G V E E++ K + G + T Y I GL + I A +L E + S + D+
Sbjct: 127 GKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNIT 186
Query: 334 LNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
N ++ + + S A FF+ M +G P + + L L K K+DE ++++K +
Sbjct: 187 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVI 246
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
A Y D +YN ++ L + EA + ++M G P+ + Y+ ++ CR +
Sbjct: 247 AKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVD 306
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A K+ ++M G ++ TYNIL+ + ++ A LF M++ G APD +Y+ +L
Sbjct: 307 DAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVL 366
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
GLC+ + A +F++ + ++ + M LC+
Sbjct: 367 NGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCK 406
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 165/363 (45%), Gaps = 4/363 (1%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
F V + FC+ KL + +++ +N + + ++I G+ K RV+EA ++ +E
Sbjct: 11 FRVVLKSFCKQGKLRDGYKLFEQML--DNGISPDGIEYNILIDGYAKKGRVDEANRLYEE 68
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ +P Y + F + E + K + G P Y I GL +
Sbjct: 69 MVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGK 128
Query: 312 ICEAKE-LGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
+ EA E L ++ + + NALI G + A M KG VP T +
Sbjct: 129 VTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYN 188
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
+ LC+ K E + + + + Y D+ +YN ++ L G+ EA + +++ K
Sbjct: 189 TILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAK 248
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
G PD YNS++ R+ + A++++ +M ASGC+ N TY+I++S +++ A
Sbjct: 249 GYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDA 308
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
++ M + G PD TY LL+GLC+ + A E+F+ V++ S +
Sbjct: 309 HKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNG 368
Query: 550 LCR 552
LC+
Sbjct: 369 LCK 371
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 204/451 (45%), Gaps = 42/451 (9%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S + + L S + +Q + + S+ Q+ + ++T + +I L + + + SV
Sbjct: 92 SVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVL 151
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
++ F I P+ N+L+ L ++G I A+++F+EM RG E + I + I C
Sbjct: 152 GKM-FKL-GIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLC 209
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
K G +D +K E + +V+ II CK + V +A + L E+ R P
Sbjct: 210 ---KTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPP 266
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
+ Y + F +G + E + K+ V P T + + GL E + EA+
Sbjct: 267 NVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEAR--- 323
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+ F M EKG P +ST + L C +
Sbjct: 324 -------------------------------LVFETMTEKGVEPDISTYNALMDGYCLQR 352
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+E +V++++ SYN++++ C S R+ EA ++ EM K L+PD Y+
Sbjct: 353 LMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYS 412
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+LM+ C+ + A L+ +M + G NL TY IL+ F + G ++ AL+L +M EK
Sbjct: 413 TLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEK 472
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ P+ YT L+EG+ L+ A E+F+K
Sbjct: 473 KLEPNIVHYTILIEGMFIAGKLEVAKELFSK 503
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 205/454 (45%), Gaps = 5/454 (1%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
TH+ S + ++ L ++ SVL ++ I D+ + +I L ++A
Sbjct: 125 THNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVE 184
Query: 141 VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+FNE+ + +++ L G A+ +F +M G + + + + I C
Sbjct: 185 LFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLC 244
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
++ + + L E+ +R I +V I+HGFC ++ EA ++ E+ R+ P
Sbjct: 245 KDRLVNDAMEFLSEMVERG---IPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMP 301
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
+ + + I+ + G V E +V + + GV P + Y + G ++R + EAK++
Sbjct: 302 NTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVF 361
Query: 320 EVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
E+++ N LI G S A M K P T S L + LC+
Sbjct: 362 EIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQL 421
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+ E + ++K + + ++ +Y +++ C G L EA +++ MK K L+P++ Y
Sbjct: 422 GRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHY 481
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
L+E L AK+L+ ++F G +++TY ++I + G + A LF M +
Sbjct: 482 TILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMED 541
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
G P++ +Y +++G Q + A + ++ V
Sbjct: 542 DGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMV 575
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 169/392 (43%), Gaps = 67/392 (17%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM---LDEVRKRENS----- 221
+D+AL F M S + FG F+ F + + V+S+ +D R N
Sbjct: 74 VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133
Query: 222 MING-----------SVIAVL--------------IIHGFCKGKRVEEAFKVLDELRIRE 256
+IN SV+ + +I+G C +++EA ++ +E+ R
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
+P+ I+Y V G+ V KK + G P Y I L +R + +A
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
E F + M+E+G P + T +++ C
Sbjct: 254 E----------------------------------FLSEMVERGIPPNVFTYNSIVHGFC 279
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+ +E ++K + D + ++ ++V LC G + EA V + M KG++PD+S
Sbjct: 280 NLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDIS 339
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN+LM+ C + L+ AKK+++ M GC+ +YNILI+ + + ++ A L M
Sbjct: 340 TYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEM 399
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
K + PD TY++L++GLCQ + A +F
Sbjct: 400 YHKALNPDTVTYSTLMQGLCQLGRPKEALNLF 431
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 173/393 (44%), Gaps = 3/393 (0%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
Y +I L + NT A VF +++ N ++++ L D +++A++ EM
Sbjct: 201 YTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMV 260
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
RG+ + + + FC +L + + E+ R+ ++ +V +++ G CK
Sbjct: 261 ERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRD--VMPNTVTFTILVDGLCKEGM 318
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
V EA V + + + +PD Y + + + L + E + V + + G AP + Y
Sbjct: 319 VSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNI 378
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKG 360
I G RR+ EAK L + D + L+ + + P+ A+ F M G
Sbjct: 379 LINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYG 438
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P L T L CK DE +++ K + ++ Y +++ + +G+L A
Sbjct: 439 PHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAK 498
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+ ++ G PD+ Y +++ +E L A L+ +M G N +YN++I F
Sbjct: 499 ELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGF 558
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
+ + A+RL M+ K + + +T+ LL+
Sbjct: 559 LQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 101/201 (50%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M + G P T + L LC K E VE++ + + ++ SY +++ LC +G
Sbjct: 154 MFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGN 213
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
A V ++M++ G P+V Y++++++ C++ L+ A + +M G N+ TYN
Sbjct: 214 TSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNS 273
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
++ F +G++ A RLF M+ + V P+ T+T L++GLC+E + A VF
Sbjct: 274 IVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKG 333
Query: 536 VMLARSILSTFMISLCRRVLI 556
V S + M C + L+
Sbjct: 334 VEPDISTYNALMDGYCLQRLM 354
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 21/246 (8%)
Query: 331 DDVLNALIGSVSSIDPRSAIV----FFNFMIEKGRVPTLSTLSN---------------- 370
DD L + V I+PR ++V F +K + T+ +L N
Sbjct: 75 DDALASFYRMVR-INPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LC+ N D V V + D ++N +++ LC G+++EA + EM ++G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+P+V Y +++ C+ A ++ +M +GC N+ TY+ +I + + A+
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
M+E+G+ P+ TY S++ G C L A +F + V DVM + + L
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313
Query: 551 CRRVLI 556
C+ ++
Sbjct: 314 CKEGMV 319
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 170/400 (42%), Gaps = 28/400 (7%)
Query: 65 SLALGFFNWASQ---QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV 121
S+A+ F Q +PN ++Y +I+ SL R +N L ++ I +
Sbjct: 215 SMAVDVFKKMEQNGCKPNV----VTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFT 270
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDE 179
Y I+ +A +F E+ D+ P + V L +G + A +F+
Sbjct: 271 YNSIVHGFCNLGQLNEATRLFKEMV--GRDVMPNTVTFTILVDGLCKEGMVSEARLVFET 328
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN-----GSVIAVLIIH 234
M+ +GVE + + +C + +++E +K MI G+ ++I+
Sbjct: 329 MTEKGVEPDISTYNALMDGYC-------LQRLMNEAKKVFEIMIRKGCAPGAHSYNILIN 381
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
G+CK +R++EA +L E+ + PD + Y + + +G E + K+ G P
Sbjct: 382 GYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHP 441
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---GSVSSIDPRSAIV 351
Y + G + EA +L + + K ++ ++++ I G + A
Sbjct: 442 NLVTYVILLDGFCKHGHLDEALKLLKSMKEKK--LEPNIVHYTILIEGMFIAGKLEVAKE 499
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F+ + G P + T + + K L K SDE ++++ + + + + SYNVM+
Sbjct: 500 LFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFL 559
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+ A +I EM K ++S + L++ +++++
Sbjct: 560 QNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDLESQDEII 599
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/462 (22%), Positives = 204/462 (44%), Gaps = 5/462 (1%)
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
FN N T ++ IL SL ++ + S+ +Q+++N I D + +I
Sbjct: 48 FNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFS 107
Query: 131 QGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTI 190
Q +FS+F ++ N+L+ L G+I AL D++ +G +
Sbjct: 108 QLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQV 167
Query: 191 GFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN-GSVIAVLIIHGFCKGKRVEEAFKVL 249
+G I C K+G++ + L +++ + ++ +V+ +II CK K V +AF +
Sbjct: 168 SYGTLINGLC---KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLY 224
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
++ + PD Y + F + + + K +K + P + + G E
Sbjct: 225 SQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKE 284
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTL 368
++ +AK + +++ D N+L+ SI+ A F+ M G + +
Sbjct: 285 GKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIY 344
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ + CK DE + +++ + ++ +Y+ ++ LC GR+ A ++ EM
Sbjct: 345 TTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHD 404
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
+G P++ Y+S+++A C+ + A L + G ++ TY ILI + G +E
Sbjct: 405 RGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLED 464
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
A +F ++L KG D YT +++G C + A + +K
Sbjct: 465 AQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSK 506
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%)
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
K P +N ++ + + A L QM +G + T+NILI+ FS++G
Sbjct: 54 HKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNS 113
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
+ +F +L+KG P A T+ +L++GLC + ++ A +K V L + T +
Sbjct: 114 LSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLI 173
Query: 548 ISLCR 552
LC+
Sbjct: 174 NGLCK 178
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 183/404 (45%), Gaps = 47/404 (11%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFS--TIGFGVFIWKFCENAKLGQVLSMLDEV 215
N LLA L G +D A+ +F RG++ S I + I FCE L + L + E+
Sbjct: 42 NLLLASLCQAGTMDQAMAIF-----RGIQCSPSVITLNILINGFCELQLLDKALELFHEM 96
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
K +++ + II +CK R+++A ++L+E C D IA VA F
Sbjct: 97 EK-NFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSC--CSSDVIAITSVARGFCKAQ 153
Query: 276 SVFER-EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
V E +++L K P + I G R+ EA E+ E +VS
Sbjct: 154 RVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVS---------- 203
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
G VP T + L CK E ++++KVLS+
Sbjct: 204 ------------------------MGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSR 239
Query: 395 DYFTD--MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D+ + + ++N ++S LC + RL A+ ++++MK + L D Y +LM+ C++
Sbjct: 240 DHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTS 299
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
+++++M GC+ ++ TY L+ + G ++ A ++ +M+ KG+ PD TTYT LL
Sbjct: 300 EVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLL 359
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
EGL + ++ A E F K + + S + C+ L+
Sbjct: 360 EGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALV 403
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 190/435 (43%), Gaps = 47/435 (10%)
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMS 181
++ SL Q +A ++F ++ P + N L+ +D AL++F EM
Sbjct: 43 LLLASLCQAGTMDQAMAIFRGIQ-----CSPSVITLNILINGFCELQLLDKALELFHEME 97
Query: 182 HR-GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-IIHGFCKG 239
+ + I +C+ +L Q +L+E +S + VIA+ + GFCK
Sbjct: 98 KNFALVPEATTYTAIIKCYCKMDRLDQARQLLEE-----SSCCSSDVIAITSVARGFCKA 152
Query: 240 KRVEEAFKVL-DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+RV+EA+++L D + + KPD +A+ ++ F G V E +L+ +G P
Sbjct: 153 QRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVT 212
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIE 358
Y I G + EA +L +V+ SS D +
Sbjct: 213 YTTLIDGFCKSGNLSEALQLFKVL-------------------SSRDHHAE--------- 244
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
P + T + L LCK ++ + E+ K + A D D +Y ++ LC GR E
Sbjct: 245 ----PNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
V +EM R+G +P V Y +L+ A C+ L+ A+++ M A G ++ TY +L+
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLE 360
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
E G++ A F +L + P A Y++L+ G C+ + A + + + ++ +
Sbjct: 361 GLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAP 420
Query: 539 ARSILSTFMISLCRR 553
+ + LC+R
Sbjct: 421 DPATCKLLVEMLCKR 435
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 91/236 (38%), Gaps = 71/236 (30%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P T S L LCK + E VE Y + ++ N++++ LC +G + +A +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60
Query: 423 IQ--------------------------------EMKRK-GLDPDVSFYNSLMEACCRED 449
+ EM++ L P+ + Y ++++ C+ D
Sbjct: 61 FRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMD 120
Query: 450 LLRPAKKLWDQMFASGCSG------------------------------------NLKTY 473
L A++L ++ +S CS ++ +
Sbjct: 121 RLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAW 178
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
N++I F + G + A + ++ G P+A TYT+L++G C+ NL A ++F
Sbjct: 179 NVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFK 234
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 37/150 (24%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK--------------------- 471
P+ ++ L+ C+ L A + ++QM C NL+
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60
Query: 472 -----------TYNILISKFSEVGEIEGALRLFHNMLEKGVA--PDATTYTSLLEGLCQE 518
T NILI+ F E+ ++ AL LFH M EK A P+ATTYT++++ C+
Sbjct: 61 FRGIQCSPSVITLNILINGFCELQLLDKALELFHEM-EKNFALVPEATTYTAIIKCYCKM 119
Query: 519 TNLQAAFEVFNKS--VNHDVMLARSILSTF 546
L A ++ +S + DV+ S+ F
Sbjct: 120 DRLDQARQLLEESSCCSSDVIAITSVARGF 149
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 83/195 (42%), Gaps = 10/195 (5%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PN +++++++ L + ++ ++KQ+K + D+ Y ++ L + T
Sbjct: 244 EPNV----VTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTS 299
Query: 137 KAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+ VF E+ E P + +L+ G + +A ++ M +G+ + V
Sbjct: 300 EVSRVFEEMLR--EGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTV 357
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
+ EN K+ +++ + +V+ ++ G CK V+EA K E+
Sbjct: 358 LLEGLFENGKVRTATEFFEKILRERCPPC--AVVYSALVRGCCKAALVDEAVKYYVEMLD 415
Query: 255 RECKPDFIAYRIVAE 269
R PD +++ E
Sbjct: 416 RRLAPDPATCKLLVE 430
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 206/462 (44%), Gaps = 9/462 (1%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
A +P++ ++Y+ + L + +++ +LK++ K + Y ++ L++
Sbjct: 36 AGCEPDY----VTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAG 91
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
+A +V ++ + ++ L+ G ++ A ++F +M G +
Sbjct: 92 RLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYT 151
Query: 194 VFIWKFCENAKLGQVLSMLDEV--RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
I C++ K + ++ E RK + + V +I G CK R+ EA +V D+
Sbjct: 152 ALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDD 211
Query: 252 LRI-RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
+ R PD + Y + + +G V E + R G P Y I G + +
Sbjct: 212 EAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAK 271
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
I +A + ++ + N ++ G + A F M E+G V T+ T S
Sbjct: 272 MIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYS 331
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
L C VE+++ + ++ SYN+++ LC +G+L +AY +++ ++
Sbjct: 332 ALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQR 391
Query: 430 GLDPDVSFYNSLMEACC-REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
L PDV +N+ + C R D + +L++ M + G S NL +Y+IL+ G +E
Sbjct: 392 RLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEV 451
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
AL +F M+ +GVAPD + +L+ LC + A EVF +
Sbjct: 452 ALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRE 493
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 192/445 (43%), Gaps = 15/445 (3%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEIC--NSLLAVLASDGYIDNAL 174
D + +I L + K +AFSV V+ CE P+ N + L +D+A
Sbjct: 6 DMVAFTVVINGLCREKRLDEAFSVLERAVRAGCE---PDYVTYNVFIDGLCKAERVDDAF 62
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIH 234
++ +M + +T+ + + + +L + +++L+++ ++ NS + ++I
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTY--TVVID 120
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK----KKRKL 290
G K RVEEA ++ ++ C+PD Y + + G E + K +K
Sbjct: 121 GLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHA 180
Query: 291 GVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSIDP-RS 348
P Y I GL RI EA+++ + V F D ++I + +
Sbjct: 181 TAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEE 240
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
F+ M +G P T + L K + VY+ + + +YN+++
Sbjct: 241 GCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILD 300
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC +GR+ EAY M+ +G V Y++LM+ C E + A +L+ +M GC
Sbjct: 301 GLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEP 360
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN-LQAAFEV 527
NL +YNI+I G++ A F +L++ + PD T+ + L GLCQ + + E+
Sbjct: 361 NLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVEL 420
Query: 528 FNKSVNHDVMLARSILSTFMISLCR 552
F V+ S M +CR
Sbjct: 421 FESMVSQGTSPNLHSYSILMDGICR 445
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 167/393 (42%), Gaps = 20/393 (5%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNK----ITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
Y +++K L S + ++ K+ K D Y +I L + +A VF
Sbjct: 150 YTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVF 209
Query: 143 NEVKFNCEDIGPEIC-NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
++ I + S++ L G ++ + F EM +RG E + + I F +
Sbjct: 210 DDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMK 269
Query: 202 NAKLGQVLSMLDEVRKRENSMI-NGSVIAV----LIIHGFCKGKRVEEAFKVLDELRIRE 256
M+ + + M+ +G+V++ +I+ G CK RV EA+ + R
Sbjct: 270 A-------KMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERG 322
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C + Y + + F G+V + ++ G P Y I GL ++ +A
Sbjct: 323 CVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAY 382
Query: 317 ELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKN 374
E ++ + D NA + G +D S + F M+ +G P L + S L
Sbjct: 383 FYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDG 442
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
+C+ + +E+++ + + D+ +N ++ +LC +GR+ EA V +E++R+ PD
Sbjct: 443 ICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSA-PD 501
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
Y SL++ R + + A+ L M GC+
Sbjct: 502 AWSYWSLLDGLSRCERMEEARLLSFHMKLQGCA 534
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
PD+ + ++ CRE L A + ++ +GC + TYN+ I + ++ A +L
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
M EK P TYT+L++GL + L A V + V
Sbjct: 65 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVE 105
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/506 (21%), Positives = 219/506 (43%), Gaps = 21/506 (4%)
Query: 66 LALGFFNWASQQ-PNFTHSPLSY----HSILKSLSLSRQINAIDSVLKQVKVNKITLDSS 120
L L F S PNF HS S H +++ LS I ++++ V+++ + S
Sbjct: 116 LGLKFIGLVSYHFPNFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVES 175
Query: 121 -------------VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASD 167
+Y ++ + +Q K ++ F ++ + CN LL L
Sbjct: 176 LISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRT 235
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G++D A +++ E+ G+E + + + C++ K V+ L ++ + + V
Sbjct: 236 GWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGK--GVFADIV 293
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+I+ +C+ VEEAF++L+ R +P + Y + +G + VL +
Sbjct: 294 TYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEM 353
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDP 346
+LG+ P Y ++ + I EA+E+ + + D ++LIG ++ +
Sbjct: 354 LQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHL 413
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A++ F M G VP + L C+ + +++ + A F D+ +YN
Sbjct: 414 YQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTF 473
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
++ LC +A + EM +G+ PD + +L+ C++ + A L++ M +
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ TYN LI F + GE+ A L+ +M+ K + PD +Y ++L G C L A
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALN 593
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+ ++ + + +T + CR
Sbjct: 594 LCDQMLEKGIRPNLVTCNTLIKGYCR 619
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 173/377 (45%), Gaps = 9/377 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ +G ++ A ++ + S RG+E + + ++ C+ K + +L E+ +
Sbjct: 296 NTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQ 355
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
N + L++ C+ + EA ++ DE+ R PD +++ + G +
Sbjct: 356 L-GLTPNAATYNTLLVE-ICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHL 413
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKF---TIDDDV 333
++ + ++ + G+ P Y I G + +A ++ E++ G F +
Sbjct: 414 YQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTF 473
Query: 334 LNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
LN L D A + FN M+E+G VP T + L + CK D+ + +++ +
Sbjct: 474 LNGLCKKKMFAD---ADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVR 530
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ D +YN ++ C +G + A + +M RK + PD Y +++ C LL
Sbjct: 531 TNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPE 590
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A L DQM G NL T N LI + G++ A M+ G+ PD+ +Y +L++
Sbjct: 591 ALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLID 650
Query: 514 GLCQETNLQAAFEVFNK 530
G +E NL+ AF + N+
Sbjct: 651 GYLKEANLEKAFILINE 667
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 174/387 (44%), Gaps = 9/387 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+LL + I A ++FDEMS RGV + F I N L Q L E+ +
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMER 425
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ ++ +VI ++I GFC+ + +A K+ DE+ R C D + Y
Sbjct: 426 --SGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMF 483
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ +++ + + G+ P + I G + + +A L E +V D N L
Sbjct: 484 ADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTL 543
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G + + A ++ MI K +P + + C E + + +
Sbjct: 544 IDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGI 603
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ + N ++ C SG + +AY + +M G+ PD YN+L++ +E L A
Sbjct: 604 RPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFI 663
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L ++M G N+ TYN++++ F G+++ A ++ M+E G+ PD TY+SL+ G
Sbjct: 664 LINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHV 723
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSIL 543
+ N++ AF HD ML R ++
Sbjct: 724 SQDNMKEAFRF------HDEMLQRGLV 744
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 195/424 (45%), Gaps = 9/424 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
L+Y++IL L + + VL ++ +T +++ Y ++ + + N +A +F+E
Sbjct: 328 LTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDE 387
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ + + P++ + SL+ VLA +G++ AL F EM G+ + + + I FC N
Sbjct: 388 M--SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRN 445
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L L M DE+ R M V ++G CK K +A + +E+ R PDF
Sbjct: 446 GALSDALKMRDEMLARGCFM--DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFY 503
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
+ + + G++ + + + + + P Y I G + AKEL + +
Sbjct: 504 TFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDM 563
Query: 323 VSGKFTIDDDVLNALI--GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ K I D + + G SS A+ + M+EKG P L T + L K C+
Sbjct: 564 IR-KDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD 622
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+ E + +N D SYN ++ L +A+ +I EM+++GL ++ YN
Sbjct: 623 MPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNL 682
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
++ C E ++ A+++ +M G + + TY+ LI+ ++ A R ML++G
Sbjct: 683 ILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRG 742
Query: 501 VAPD 504
+ PD
Sbjct: 743 LVPD 746
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 128/273 (46%), Gaps = 13/273 (4%)
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR 347
R+ GV+ N + + GL+ + A E+ +V G ++ LN ++ ++
Sbjct: 214 RRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKF 273
Query: 348 SAIVFF-NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
++FF + M KG + T + L C+ +E ++ S+ + +YN +
Sbjct: 274 ENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAI 333
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC G+ A V+ EM + GL P+ + YN+L+ CR D + A++++D+M G
Sbjct: 334 LYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGV 393
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+L +++ LI + G + AL F M G+ PD YT L++G C+ L A +
Sbjct: 394 LPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALK 453
Query: 527 VFNKSVNHDVMLARSIL------STFMISLCRR 553
+ D MLAR +TF+ LC++
Sbjct: 454 M------RDEMLARGCFMDVVTYNTFLNGLCKK 480
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 116/257 (45%), Gaps = 12/257 (4%)
Query: 78 PNFTHSPLSYHSILKSLSLSRQINAIDSVLK-QVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
P+F K ++ + +N +++++ +K +K+T Y +I +
Sbjct: 500 PDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVT-----YNTLIDGFCKAGEMG 554
Query: 137 KAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+A +++++ +DI P+ + ++L S G + AL + D+M +G+ + +
Sbjct: 555 RAKELWDDMIR--KDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNT 612
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
I +C + + + L ++ N +I S +I G+ K +E+AF +++E+
Sbjct: 613 LIKGYCRSGDMPKAYEYLSKMI--SNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
R + + I Y ++ F G + E E VL+K ++G+ P Y I G + + + E
Sbjct: 671 RGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKE 730
Query: 315 AKELGEVIVSGKFTIDD 331
A + ++ DD
Sbjct: 731 AFRFHDEMLQRGLVPDD 747
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 189/420 (45%), Gaps = 11/420 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALK 175
D Y +I + A V + ++ +D P+ N ++ L S G +D ALK
Sbjct: 153 DVFAYNALINGFCKMNRIDDATRVLDRMR--SKDFSPDTVTYNIMIGSLCSRGKLDLALK 210
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ D++ + + I + + I + + L +LDE+ R + II G
Sbjct: 211 VLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSR--GLKPDMFTYNTIIRG 268
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
CK V+ AF+++ L ++ C+PD I+Y I+ G E E ++ K P
Sbjct: 269 MCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 328
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRSAIVF 352
Y I L + +I EA L +++ T D + LI + +D AI F
Sbjct: 329 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD--VAIEF 386
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
MI G +P + + + LCK K+D+ +E++ L + SYN M S L +
Sbjct: 387 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 446
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
SG A +I EM G+DPD YNS++ CRE ++ A +L M + ++ T
Sbjct: 447 SGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVT 506
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YNI++ F + IE A+ + +M+ G P+ TTYT L+EG+ A E+ N V
Sbjct: 507 YNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 566
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 149/322 (46%), Gaps = 2/322 (0%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I H C+ E+ +L+ + + PD I + + F + +V + V++ K G
Sbjct: 91 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG 150
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AI 350
P Y I G RI +A + + + S F+ D N +IGS+ S A+
Sbjct: 151 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 209
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ ++ PT+ T + L + DE +++ + + DM +YN ++ +
Sbjct: 210 KVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGM 269
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C G + A+ +I+ ++ KG +PDV YN L+ A + +KL +MF+ C N+
Sbjct: 270 CKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 329
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TY+ILI+ G+IE A+ L M EKG+ PDA +Y L+ C+E L A E
Sbjct: 330 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 389
Query: 531 SVNHDVMLARSILSTFMISLCR 552
++ + +T + +LC+
Sbjct: 390 MISDGCLPDIVNYNTVLATLCK 411
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 162/331 (48%), Gaps = 11/331 (3%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I+GFCK R+++A +VLD +R ++ PD + Y I+ G + VL +
Sbjct: 160 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDN 219
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV--SSIDPRSA 349
P Y I ++E + EA +L + ++S D N +I + + R+
Sbjct: 220 CQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 279
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ N + KG P + + + L + L + K +E ++ + + ++ +Y+++++
Sbjct: 280 EMIRNLEL-KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 338
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC G++ EA +++ MK KGL PD Y+ L+ A CRE L A + + M + GC +
Sbjct: 339 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 398
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN----LQAAF 525
+ YN +++ + G+ + AL +F + E G +P++++Y ++ L + L
Sbjct: 399 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL 458
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
E+ + ++ D + S++S LCR ++
Sbjct: 459 EMVSNGIDPDEITYNSMISC----LCREGMV 485
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 66/134 (49%)
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ E+ K PDV YN+L+ C+ + + A ++ D+M + S + TYNI+I
Sbjct: 142 VMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 201
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
G+++ AL++ +L P TYT L+E E + A ++ ++ ++ +
Sbjct: 202 RGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFT 261
Query: 543 LSTFMISLCRRVLI 556
+T + +C+ ++
Sbjct: 262 YNTIIRGMCKEGMV 275
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/361 (17%), Positives = 149/361 (41%), Gaps = 17/361 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++++ L ++ +L ++ + D Y II + + +AF +
Sbjct: 225 ITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRN 284
Query: 145 VKF-NCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
++ CE P++ N LL L + G + K+ +M + + + + + I C
Sbjct: 285 LELKGCE---PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 341
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ K+ + +++L ++ E + + +I FC+ R++ A + L+ + C PD
Sbjct: 342 DGKIEEAMNLLKLMK--EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 399
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ Y V G + + K ++G +P ++ Y L A +
Sbjct: 400 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 459
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRSAIV--FFNFMIEKGRV---PTLSTLSNLSKNLC 376
+VS D+ N++I + R +V F +++ P++ T + + C
Sbjct: 460 MVSNGIDPDEITYNSMISCLC----REGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFC 515
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K ++ ++ ++V + N + +Y V++ + +G EA + ++ R + S
Sbjct: 516 KAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAISEYS 575
Query: 437 F 437
F
Sbjct: 576 F 576
>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 137/550 (24%), Positives = 231/550 (42%), Gaps = 39/550 (7%)
Query: 18 ISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTH---HS----LALGF 70
+S RTRP +W EQTL L D PS ++P L+H H ++L F
Sbjct: 101 VSDITRTRP--RW----EQTL----LSDF--PSF--NFLDPTFLSHFVEHQKNALISLRF 146
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
F+W S Q F+ S + + +L + NA S L N Y I L
Sbjct: 147 FHWLSSQSGFSPDSSSCNVLFDALVEAGACNAAKSFLDSTNFNPKPASLEAY---IRCLC 203
Query: 131 QGKNTQKAFSVFNEVKFNCEDIGPEIC------NSLLAVLASDGYIDNALKMFDEMSHRG 184
+G ++A SVF ++K G +C NS+L G ID +++ EM
Sbjct: 204 KGGLVEEAISVFGQLK------GIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESS 257
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
V G + FC+ ++ ++L V E+ ++ + +I GFCK K
Sbjct: 258 VVADVHTVGYLVQAFCDENRISDGHNLLRRVL--EDGVVPRNAAFNKLISGFCKDKAYGR 315
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
+L + R PD Y+ V G E V K + G AP Y I
Sbjct: 316 VSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIH 375
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVP 363
GL + + +A++L ++ F ++ NA+I I + A + M +KG
Sbjct: 376 GLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGE 435
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ + + K LC K E ++++ +S + +YN +V C G++ E ++
Sbjct: 436 KTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLL 495
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
E+ +G+ P + Y L++ C+E ++ AK LWD M G + T++ +I+ F +
Sbjct: 496 YELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQ 555
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
G + ML + P ++ SL++ L Q L A V + + L+ SI
Sbjct: 556 GCAMEGMEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSISIC 615
Query: 544 STFMISLCRR 553
++ + LC +
Sbjct: 616 NSLVTKLCEK 625
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 185/400 (46%), Gaps = 12/400 (3%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
C SL+ G A ++ + + + G I + V I +C++ ++ + L +L+ +
Sbjct: 145 CTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM- 203
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
S+ V I+ C +++EA +VLD REC PD I Y I+ E
Sbjct: 204 ----SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSG 259
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-KELGEVIVSG---KFTIDDD 332
V + +L + RK G P Y I G+ E R+ EA K L + + G +
Sbjct: 260 VGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNI 319
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
+L ++ + +D A M+ KG P++ T + L LC++ ++V + +
Sbjct: 320 ILRSMCSTGRWMD---AERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMP 376
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ + SYN ++ C ++ A ++ M +G PD+ YN+L+ A C++
Sbjct: 377 KHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKAD 436
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A ++ +Q+ + GCS L TYN +I ++VG+ E A L M KG+ PD TY++LL
Sbjct: 437 AAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLL 496
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
GL E + A ++F+ + + + M+ LC+
Sbjct: 497 RGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCK 536
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 179/401 (44%), Gaps = 10/401 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALK 175
D Y +I + KA V + + P++ N++L L G + A++
Sbjct: 176 DVITYNVLIGGYCKSGEIDKALQVLERM-----SVAPDVVTYNTILRSLCDSGKLKEAME 230
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ D R I + + I C ++ +GQ + +LDE+RK+ V ++I+G
Sbjct: 231 VLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKK--GCKPDVVTYNVLING 288
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
CK R++EA K L+ + + C+P+ I + I+ G + E +L + G +P
Sbjct: 289 ICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPS 348
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFN 354
+ I L +R + A ++ E + + N L+ G AI +
Sbjct: 349 VVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLE 408
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+ +G P + T + L LCK K+D VE+ LS+ + +YN ++ L G
Sbjct: 409 IMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVG 468
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ A +++EM+RKGL PD+ Y++L+ E + A K++ M + TYN
Sbjct: 469 KTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYN 528
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
++ + + A+ M+EKG P TYT L+EG+
Sbjct: 529 AIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 13/203 (6%)
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F MI +G +P + ++L + C+ K+ + + ++L + D+ +YNV++ C
Sbjct: 129 FLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYC 188
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
SG + +A +Q ++R + PDV YN+++ + C L+ A ++ D+ C ++
Sbjct: 189 KSGEIDKA---LQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVI 245
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
TY ILI + A++L M +KG PD TY L+ G+C+E L A + N
Sbjct: 246 TYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNM 305
Query: 532 ---------VNHDVMLARSILST 545
+ H+++L RS+ ST
Sbjct: 306 PLYGCQPNVITHNIIL-RSMCST 327
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 121/296 (40%), Gaps = 37/296 (12%)
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+EE K L+ + + PD IA + F G + +++ G P Y
Sbjct: 123 LEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNV 182
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGR 361
I G C++ E+ D L L R ++
Sbjct: 183 LIGGY------CKSGEI------------DKALQVL--------ERMSV----------- 205
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P + T + + ++LC K E +EV + + D+ +Y +++ C + +A
Sbjct: 206 APDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMK 265
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
++ EM++KG PDV YN L+ C+E L A K + M GC N+ T+NI++
Sbjct: 266 LLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMC 325
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
G A RL +ML KG +P T+ L+ LC++ L A +V K H M
Sbjct: 326 STGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCM 381
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N+ + L +G L E ++ M +G PDV SL+ CR R A ++ + +
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
SG ++ TYN+LI + + GEI+ AL++ M VAPD TY ++L LC L+
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKE 227
Query: 524 AFEVFNKSVNHD 535
A EV ++ + +
Sbjct: 228 AMEVLDRQMQRE 239
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 132/560 (23%), Positives = 236/560 (42%), Gaps = 54/560 (9%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
KW P E+ L L L+ + P LV ++ + S+ + FF WA ++ NF H +Y
Sbjct: 67 KWGPDAEKALEVLKLK--VDPRLVREILK--IDVEVSVKIQFFKWAGKRRNFEHDSTTYM 122
Query: 89 SILKSLSLSRQ-----------------------------------INAIDSVLKQVKVN 113
++++ L R +N SV QVK
Sbjct: 123 ALIRCLDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMVNRALSVFYQVKGR 182
Query: 114 KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEIC--NSLLAVLASDGY 169
K +S Y II L+Q + +K ++NE+ C ++ P+ ++L++ A
Sbjct: 183 KCRPTASTYNSIILMLMQEGHHEKVHELYNEM---CSEVHCFPDTVTYSALISAFAKLNR 239
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
D+A+++FDEM G++ + + + + + K+ + L ++ E+R R + +
Sbjct: 240 DDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTE 299
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+I G K RVE+A+ + CKPD + + + + + + +
Sbjct: 300 --LIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKL 357
Query: 290 LGVAPRTNDYREFILGLI-VERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPR 347
L AP Y I L + + EA E + + LI G +
Sbjct: 358 LNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVE 417
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A++ M EKG P + +L L + D E+++ L N + Y VM+
Sbjct: 418 KALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMI 477
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
GRL EA + EMK+ G PDV YN+LM R + + A L+ M +GC+
Sbjct: 478 KHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCT 537
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF-- 525
++ ++NI+++ + G +GAL +F M + PD ++ ++L L + + A
Sbjct: 538 PDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKL 597
Query: 526 --EVFNKSVNHDVMLARSIL 543
E+ +K +D++ SIL
Sbjct: 598 MQEMSSKGFQYDLITYSSIL 617
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 183/404 (45%), Gaps = 47/404 (11%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFS--TIGFGVFIWKFCENAKLGQVLSMLDEV 215
N LLA L G +D A+ +F RG++ S I + I FCE L + L + E+
Sbjct: 42 NLLLASLCQAGKMDQAMAIF-----RGIQCSPSVITLNILINGFCELQLLDKALELFHEM 96
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
K +++ + II +CK R+++A ++L+E C D IA VA F
Sbjct: 97 EK-NFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSC--CSSDVIAITSVARGFCKAQ 153
Query: 276 SVFER-EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
V E +++L K P + I G R+ EA E+ E +VS
Sbjct: 154 RVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVS---------- 203
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
G VP T + L CK E ++++KVLS+
Sbjct: 204 ------------------------MGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSR 239
Query: 395 DYFTD--MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D+ + + ++N ++S LC + RL A+ ++++MK + L D Y +LM+ C++
Sbjct: 240 DHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTS 299
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
+++++M GC+ ++ TY L+ + G ++ A ++ +M+ KG+ PD TTYT LL
Sbjct: 300 EVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLL 359
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
EGL + ++ A E F K + + S + C+ L+
Sbjct: 360 EGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALV 403
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 190/435 (43%), Gaps = 47/435 (10%)
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMS 181
++ SL Q +A ++F ++ P + N L+ +D AL++F EM
Sbjct: 43 LLLASLCQAGKMDQAMAIFRGIQ-----CSPSVITLNILINGFCELQLLDKALELFHEME 97
Query: 182 HR-GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-IIHGFCKG 239
+ + I +C+ +L Q +L+E +S + VIA+ + GFCK
Sbjct: 98 KNFALVPEATTYTAIIKCYCKMDRLDQARQLLEE-----SSCCSSDVIAITSVARGFCKA 152
Query: 240 KRVEEAFKVL-DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+RV+EA+++L D + + KPD +A+ ++ F G V E +L+ +G P
Sbjct: 153 QRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVT 212
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIE 358
Y I G + EA +L +V+ SS D +
Sbjct: 213 YTTLIDGFCKSGNLSEALQLFKVL-------------------SSRDHHAE--------- 244
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
P + T + L LCK ++ + E+ K + A D D +Y ++ LC GR E
Sbjct: 245 ----PNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
V +EM R+G +P V Y +L+ A C+ L+ A+++ M A G ++ TY +L+
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLE 360
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
E G++ A F +L + P A Y++L+ G C+ + A + + + ++ +
Sbjct: 361 GLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAP 420
Query: 539 ARSILSTFMISLCRR 553
+ + LC+R
Sbjct: 421 DPATCKLLVEMLCKR 435
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 92/236 (38%), Gaps = 71/236 (30%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P T S L LCK + E VE Y + ++ N++++ LC +G++ +A +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60
Query: 423 IQ--------------------------------EMKRK-GLDPDVSFYNSLMEACCRED 449
+ EM++ L P+ + Y ++++ C+ D
Sbjct: 61 FRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMD 120
Query: 450 LLRPAKKLWDQMFASGCSG------------------------------------NLKTY 473
L A++L ++ +S CS ++ +
Sbjct: 121 RLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAW 178
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
N++I F + G + A + ++ G P+A TYT+L++G C+ NL A ++F
Sbjct: 179 NVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFK 234
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 37/150 (24%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK--------------------- 471
P+ ++ L+ C+ L A + ++QM C NL+
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60
Query: 472 -----------TYNILISKFSEVGEIEGALRLFHNMLEKGVA--PDATTYTSLLEGLCQE 518
T NILI+ F E+ ++ AL LFH M EK A P+ATTYT++++ C+
Sbjct: 61 FRGIQCSPSVITLNILINGFCELQLLDKALELFHEM-EKNFALVPEATTYTAIIKCYCKM 119
Query: 519 TNLQAAFEVFNKS--VNHDVMLARSILSTF 546
L A ++ +S + DV+ S+ F
Sbjct: 120 DRLDQARQLLEESSCCSSDVIAITSVARGF 149
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 83/195 (42%), Gaps = 10/195 (5%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PN +++++++ L + ++ ++KQ+K + D+ Y ++ L + T
Sbjct: 244 EPNV----VTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTS 299
Query: 137 KAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+ VF E+ E P + +L+ G + +A ++ M +G+ + V
Sbjct: 300 EVSRVFEEMLR--EGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTV 357
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
+ EN K+ +++ + +V+ ++ G CK V+EA K E+
Sbjct: 358 LLEGLFENGKVRTATEFFEKILRERCPPC--AVVYSALVRGCCKAALVDEAVKYYVEMLD 415
Query: 255 RECKPDFIAYRIVAE 269
R PD +++ E
Sbjct: 416 RRLAPDPATCKLLVE 430
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 205/482 (42%), Gaps = 46/482 (9%)
Query: 88 HSILKSLSLSRQI--NAIDSVLKQVK-VNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
HS L S +Q+ +A+D +L Q++ + I D+ VY ++ L++G + SV++E
Sbjct: 113 HSFLDSYE-GQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSE 171
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ I P++ N+L+ L + A+ M +EMS RGV F + F E
Sbjct: 172 M--GARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEE 229
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF---------------- 246
+ L + + R E V ++I+G+CK RVE+A
Sbjct: 230 GSIEAALRV--KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 287
Query: 247 -------------------KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
KV+D + PD Y IV G + E + +L +
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DP 346
G P + I L R+ EA +L + + D N LI ++ + DP
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 407
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A+ F M G P T + L NLC K + +++ K + + +YN +
Sbjct: 408 HLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 467
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC R+ EA V +M +G+ + +N+L++ C++ + A +L +QM + G
Sbjct: 468 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 527
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
N TYN +++ + + G+I+ A + M G D TY +L+ GLC+ Q A +
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 587
Query: 527 VF 528
V
Sbjct: 588 VL 589
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 106/494 (21%), Positives = 209/494 (42%), Gaps = 50/494 (10%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF-I 125
AL N A + +F P Y I++ L + A+D L +V V ++ + + +
Sbjct: 57 ALRMLNAALARDDFAPGPEVYEEIIRKLG---AVGALD--LMKVLVAEMRREGHQVKLGV 111
Query: 126 IPSLIQGKNTQKAFS-----VFNEVK--FNCEDIGPEICNSLLAVLASDGYIDNALKMFD 178
+ S + Q+ F + N+++ F + + N LL VL + ++
Sbjct: 112 VHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQ-ADTVVYNHLLNVLVEGSKMKLLESVYS 170
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
EM RG++ + F + C ++ + ML+E+ R + ++ GF +
Sbjct: 171 EMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSR--GVAPDETTFTTLMQGFVE 228
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+E A +V + C + ++ + +G V + ++++ G P
Sbjct: 229 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQIT 288
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIE 358
Y F+ GL C+ +G A+ + M++
Sbjct: 289 YNTFVNGL------CQNDHVGH----------------------------ALKVMDVMVQ 314
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
+G P + T + + LCK + +E + + D+ ++N +++ LCT RL E
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A + +++ KG+ PDV +N L+ A C+ A +L+++M SGC+ + TYN LI
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+G++ AL L +M G TY ++++GLC++ ++ A EVF++ +
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494
Query: 539 ARSILSTFMISLCR 552
+T + LC+
Sbjct: 495 NAITFNTLIDGLCK 508
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 189/414 (45%), Gaps = 19/414 (4%)
Query: 153 GPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS-- 210
GPE+ ++ L + G +D + EM G + GV + F ++ + Q+
Sbjct: 73 GPEVYEEIIRKLGAVGALDLMKVLVAEMRREG---HQVKLGV-VHSFLDSYEGQQLFDDA 128
Query: 211 ---MLDEVRK----RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+L++++ + ++++ ++ VL+ +G +++ V E+ R KPD +
Sbjct: 129 VDLILNQLQPLFGIQADTVVYNHLLNVLV-----EGSKMKLLESVYSEMGARGIKPDVVT 183
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+ + + V ++L++ GVAP + + G + E I A + ++
Sbjct: 184 FNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML 243
Query: 324 SGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+ +N LI + A+ + I G P T + LC+ +
Sbjct: 244 EMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVG 303
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
++V V+ + D+ +YN++V+ LC +G+L EA G++ +M +G PD++ +N+L+
Sbjct: 304 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI 363
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
A C + L A L Q+ G S ++ T+NILI+ +VG+ ALRLF M G
Sbjct: 364 AALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCT 423
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
PD TY +L++ LC L A ++ + + +T + LC+++ I
Sbjct: 424 PDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 477
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 177/403 (43%), Gaps = 10/403 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMF 177
D Y + L Q + A V + + D N ++ L +G ++ A +
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 344
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGF 236
++M RG F I C +L + L + +V + ++ V ++I+
Sbjct: 345 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG---VSPDVYTFNILINAL 401
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
CK A ++ +E++ C PD + Y + + +G + + +LK G T
Sbjct: 402 CKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRST 461
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRSAIVFF 353
Y I GL + RI EA+E+ + + + + N LI + ID A
Sbjct: 462 ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKID--DAFELI 519
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
N MI +G P T +++ + CK+ + ++ + ++AN + D+ +Y +++ LC +
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKA 579
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
GR + A V++ M+ KG+ P YN ++++ R + +R A L+ +M G + TY
Sbjct: 580 GRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTY 639
Query: 474 NILISKFSEVG-EIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
I+ G I+ A M++KG P+ +++ L EGL
Sbjct: 640 KIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 178/366 (48%), Gaps = 15/366 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N +L L S G AL++ +M + + + I FC ++ L ++ E+R+
Sbjct: 118 NIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREMRE 173
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR-ECKPDFIAYRIV----AEEFK 272
R N +I G+CK RV+EA KV DE+ + E KP+ + Y + ++ K
Sbjct: 174 RGGIAPNQYTYGT-VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 232
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
L ++ R+ ++++ GVA Y + L ++ R EA EL E + D
Sbjct: 233 LDTALLYRDRMVER----GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 288
Query: 333 VLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
N LI G + + A+ F M +G T+ T + L L K+ + E +++
Sbjct: 289 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 348
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
D+ YN +++ TSG + A+ ++ EM++K + PD YN+LM C +
Sbjct: 349 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 408
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A+KL D+M G +L TYN LIS +S G+++ ALR+ + M+ KG P TY +L
Sbjct: 409 DEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 468
Query: 512 LEGLCQ 517
++GLC+
Sbjct: 469 IQGLCK 474
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 155/383 (40%), Gaps = 81/383 (21%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A +F +M + T F + + C K + L +L ++ R N++ +VIA
Sbjct: 98 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM-PRPNAVTYNTVIA--- 153
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
GFC RV+ A ++ E+R R G+
Sbjct: 154 --GFCSRGRVQAALDIMREMRERG----------------------------------GI 177
Query: 293 APRTNDYREFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRS 348
AP Y I G R+ EA K E++ G+ + + NALIG +D +
Sbjct: 178 APNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLD--T 235
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+++ + M+E+G T++T YN++V
Sbjct: 236 ALLYRDRMVERGVAMTVAT-----------------------------------YNLLVH 260
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L GR EAY +++EM KGL PDV YN L+ C+E ++ A ++++ M G
Sbjct: 261 ALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRA 320
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ TY LI S+ G+++ +LF + +G+ PD Y +L+ N+ AFE+
Sbjct: 321 TVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM 380
Query: 529 NKSVNHDVMLARSILSTFMISLC 551
+ + +T M LC
Sbjct: 381 GEMEKKRIAPDDVTYNTLMRGLC 403
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 124/297 (41%), Gaps = 46/297 (15%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L DG A ++ +EM +G+ + + I C+ + + L + + + +
Sbjct: 256 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 315
Query: 218 RENSMINGSVIA-VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
R + +V+ +I+ K +V+E K+ DE R +PD + Y + G+
Sbjct: 316 RG---VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 372
Query: 277 V---FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
+ FE ++KKR +AP Y + GL + R+ EA++L + + D
Sbjct: 373 IDRAFEIMGEMEKKR---IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVT 429
Query: 334 LNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
N LI S D + A+ N M+ KG PTL T
Sbjct: 430 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT------------------------- 464
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
YN ++ LC +G+ +A +++EM G+ PD S Y SL+E ED
Sbjct: 465 ----------YNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED 511
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 111/263 (42%), Gaps = 2/263 (0%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+ ++ +L + + +++++ + D Y +I + N +KA +F +
Sbjct: 254 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM 313
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+L+ L+ G + K+FDE RG+ + + I + +
Sbjct: 314 SRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNI 373
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ ++ E+ K+ + V ++ G C RV+EA K++DE+ R +PD + Y
Sbjct: 374 DRAFEIMGEMEKKR--IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYN 431
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + + G V + + + G P Y I GL + +A+ + + +V
Sbjct: 432 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 491
Query: 326 KFTIDDDVLNALIGSVSSIDPRS 348
T DD +LI +++ D R+
Sbjct: 492 GITPDDSTYISLIEGLTTEDERA 514
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 178/366 (48%), Gaps = 15/366 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N +L L S G AL++ +M + + + I FC ++ L ++ E+R+
Sbjct: 487 NIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREMRE 542
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR-ECKPDFIAYRIV----AEEFK 272
R N +I G+CK RV+EA KV DE+ + E KP+ + Y + ++ K
Sbjct: 543 RGGIAPNQYTYGT-VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 601
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
L ++ R+ ++++ GVA Y + L ++ R EA EL E + D
Sbjct: 602 LDTALLYRDRMVER----GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 657
Query: 333 VLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
N LI G + + A+ F M +G T+ T + L L K+ + E +++
Sbjct: 658 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 717
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
D+ YN +++ TSG + A+ ++ EM++K + PD YN+LM C +
Sbjct: 718 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 777
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A+KL D+M G +L TYN LIS +S G+++ ALR+ + M+ KG P TY +L
Sbjct: 778 DEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 837
Query: 512 LEGLCQ 517
++GLC+
Sbjct: 838 IQGLCK 843
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 171/419 (40%), Gaps = 81/419 (19%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A +F +M + T F + + C K + L +L ++ R N++ +VIA
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM-PRPNAVTYNTVIA--- 522
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
GFC RV+ A ++ E+R R G+
Sbjct: 523 --GFCSRGRVQAALDIMREMRERG----------------------------------GI 546
Query: 293 APRTNDYREFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRS 348
AP Y I G R+ EA K E++ G+ + + NALIG +D +
Sbjct: 547 APNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLD--T 604
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+++ + M+E+G T++T + L L + E E+ + + D+ +YN++++
Sbjct: 605 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 664
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG--- 465
C G +++A + + M R+G+ V Y +L+ A ++ ++ KL+D+ G
Sbjct: 665 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 724
Query: 466 -------------CSGNLK-------------------TYNILISKFSEVGEIEGALRLF 493
SGN+ TYN L+ +G ++ A +L
Sbjct: 725 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 784
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M E+G+ PD TY +L+ G + +++ A + N+ +N + + LC+
Sbjct: 785 DEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 843
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/371 (19%), Positives = 155/371 (41%), Gaps = 11/371 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKV-NKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
++Y++++ ++ A ++++++ I + Y +I + +A VF+
Sbjct: 515 VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD 574
Query: 144 EVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
E+ E + PE + N+L+ G +D AL D M RGV + + + +
Sbjct: 575 EMLTKGE-VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM 633
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ + + +++E+ + + ++I+G CK V++A ++ + + R +
Sbjct: 634 DGRGTEAYELVEEMGGK--GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 691
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ Y + G V E + + + + G+ P Y I I A E+
Sbjct: 692 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 751
Query: 322 IVSGKFTIDDDVLNALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ + DD N L+ + +D A + M E+G P L T + L +
Sbjct: 752 MEKKRIAPDDVTYNTLMRGLCLLGRVD--EARKLIDEMTERGIQPDLVTYNTLISGYSMK 809
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+ + + + + + +YN ++ LC +G+ +A +++EM G+ PD S Y
Sbjct: 810 GDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 869
Query: 439 NSLMEACCRED 449
SL+E ED
Sbjct: 870 ISLIEGLTTED 880
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 111/263 (42%), Gaps = 2/263 (0%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+ ++ +L + + +++++ + D Y +I + N +KA +F +
Sbjct: 623 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM 682
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+L+ L+ G + K+FDE RG+ + + I + +
Sbjct: 683 SRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNI 742
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ ++ E+ K+ + V ++ G C RV+EA K++DE+ R +PD + Y
Sbjct: 743 DRAFEIMGEMEKKR--IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYN 800
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + + G V + + + G P Y I GL + +A+ + + +V
Sbjct: 801 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 860
Query: 326 KFTIDDDVLNALIGSVSSIDPRS 348
T DD +LI +++ D R+
Sbjct: 861 GITPDDSTYISLIEGLTTEDERA 883
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 138/548 (25%), Positives = 241/548 (43%), Gaps = 33/548 (6%)
Query: 18 ISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHH---SLALGFFNWA 74
+S+++ K LL+ H L DSLS + + +LL +L L F WA
Sbjct: 25 LSSTSHALLVDKAITLLKFHPHHL---DSLSSRFTPQSASYFLLKSQFDQTLTLKFLTWA 81
Query: 75 SQQPNF-THSP-LSYH------------SILKSLSLSRQINAIDSVLKQVKVNKITLDSS 120
P F +H LS H ++ + L+LS + S+ + +K + +SS
Sbjct: 82 RNHPFFDSHCKCLSLHILTRFKLYKTAQTLAQELALSASDPSGSSIFQCLKDSYHVYNSS 141
Query: 121 --VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLL-AVLASDGYID-NALKM 176
V+ ++ S +A + N K + G NS+L A++ S G + +A ++
Sbjct: 142 SAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEV 201
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
+ EM V + + + I FC +L + L E+ + N + V +I +
Sbjct: 202 YREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMER--NGCLPNVVTYNTLIDAY 259
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
CK R++EAF +L + + +P+ I+Y ++ GS+ E +L++ G P
Sbjct: 260 CKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDE 319
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNF 355
Y + G E +A + +V + ALI S+ + + A+ FF+
Sbjct: 320 VTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQ 379
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M +G P T + L ++ +E + ++ + + + +YN + C R
Sbjct: 380 MRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLER 439
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ EA GV+QEM KGL PDV Y++++ CR+ L A ++ +M G S + TY+
Sbjct: 440 MEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSS 499
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI E+ + A L ML+ G+ PD TYT+L+ C E +L A + HD
Sbjct: 500 LIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHL------HD 553
Query: 536 VMLARSIL 543
M+ + L
Sbjct: 554 EMIHKGFL 561
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/511 (22%), Positives = 213/511 (41%), Gaps = 53/511 (10%)
Query: 75 SQQPNFTHSPLSYHSILKSLSLSR---QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQ 131
++ F LSY+S+L ++ SR +++A + V +++ ++++ + Y +I
Sbjct: 168 AKSSGFMPGVLSYNSVLDAIVRSRGSVKLSA-EEVYREMIRSRVSPNVYTYNILIRGFCS 226
Query: 132 GKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
QK F E++ N N+L+ G ID A + MS +G++ + I
Sbjct: 227 VGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLIS 286
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRE--------NSMING-----SVIAVLIIHG--- 235
+ V I C + + +L+E+ + N+++NG + L+IH
Sbjct: 287 YNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMV 346
Query: 236 -----------------FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
CK + + A + D++RIR +P+ Y + + F G +
Sbjct: 347 RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLN 406
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
E +L + + G +P Y FI G V R+ EA + + +V D + +I
Sbjct: 407 EAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTII 466
Query: 339 -GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
G + A M+EKG P T S+L + LC+ + E ++ + +
Sbjct: 467 SGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLP 526
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D +Y +++ C G L +A + EM KG PD Y+ L+ ++ R AK+L
Sbjct: 527 PDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRL 586
Query: 458 ---------------WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+D + + + K+ LI F G + A R+F +M+E+
Sbjct: 587 LFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHK 646
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
P Y ++ G C+ NL AF ++ + ++
Sbjct: 647 PGEAVYNVIIHGHCRGGNLPKAFNLYKEMIH 677
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 194/472 (41%), Gaps = 30/472 (6%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN +SY+ I+ L + +L+++ T D Y ++ + N
Sbjct: 281 QPNL----ISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFH 336
Query: 137 KAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+A + E+ N + P + +L+ + ++ A++ FD+M RG+ + +
Sbjct: 337 QALVIHAEMVRN--GVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 394
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELR 253
I F L + +L+E+ + S + SV+ IHG C +R+EEA V+ E+
Sbjct: 395 LIDGFSRQGLLNEAYRILNEMTE---SGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 451
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR-KLGVAPRTNDYREFILGLIVERRI 312
+ PD ++Y + F G + +R +K++ + GV+P Y I GL RR+
Sbjct: 452 EKGLAPDVVSYSTIISGFCRKGEL-DRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRL 510
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
EA +L + ++ D+ LI + D A+ + MI KG +P T S L
Sbjct: 511 TEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVL 570
Query: 372 SKNLCKRNKSDELVEV---------------YKVLSANDYFTDMESYNVMVSFLCTSGRL 416
L K+ ++ E + Y L N + +S ++ C G +
Sbjct: 571 INGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLM 630
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
EA V + M + P + YN ++ CR L A L+ +M SG + T L
Sbjct: 631 HEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITL 690
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
I + G E + + L +A L+E +E N++A V
Sbjct: 691 IKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVL 742
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M KG P L + + + LC+ E E+ + + + D +YN +++ C G
Sbjct: 275 MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGN 334
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+A + EM R G+ P V Y +L+ + C+ L A + +DQM G N +TY
Sbjct: 335 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 394
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC----QETNLQAAFEVFNKS 531
LI FS G + A R+ + M E G +P TY + + G C E L E+ K
Sbjct: 395 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 454
Query: 532 VNHDVMLARSILSTFMISLCRR 553
+ DV+ +I+S F CR+
Sbjct: 455 LAPDVVSYSTIISGF----CRK 472
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 205/482 (42%), Gaps = 46/482 (9%)
Query: 88 HSILKSLSLSRQI--NAIDSVLKQVK-VNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
HS L S +Q+ +A+D +L Q++ + I D+ VY ++ L++G + SV++E
Sbjct: 113 HSFLDSYE-GQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSE 171
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ I P++ N+L+ L + A+ M +EMS RGV F + F E
Sbjct: 172 M--GARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEE 229
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF---------------- 246
+ L + + R E V ++I+G+CK RVE+A
Sbjct: 230 GSIEAALRV--KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 287
Query: 247 -------------------KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
KV+D + PD Y IV G + E + +L +
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DP 346
G P + I L R+ EA +L + + D N LI ++ + DP
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 407
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A+ F M G P T + L NLC K + +++ K + + +YN +
Sbjct: 408 HLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 467
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC R+ EA V +M +G+ + +N+L++ C++ + A +L +QM + G
Sbjct: 468 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 527
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
N TYN +++ + + G+I+ A + M G D TY +L+ GLC+ Q A +
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 587
Query: 527 VF 528
V
Sbjct: 588 VL 589
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/494 (21%), Positives = 209/494 (42%), Gaps = 50/494 (10%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF-I 125
AL N A + +F P Y I++ L + A+D L +V V ++ + + +
Sbjct: 57 ALRMLNAALARDDFAPGPEVYEEIIRKLG---AVGALD--LMKVLVAEMRREGHQVKLGV 111
Query: 126 IPSLIQGKNTQKAFS-----VFNEVK--FNCEDIGPEICNSLLAVLASDGYIDNALKMFD 178
+ S + Q+ F + N+++ F + + N LL VL + ++
Sbjct: 112 VHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQ-ADTVVYNHLLNVLVEGSKMKLLESVYS 170
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
EM RG++ + F + C ++ + ML+E+ R + ++ GF +
Sbjct: 171 EMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSR--GVAPDETTFTTLMQGFVE 228
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+E A +V + C + ++ + +G V + ++++ G P
Sbjct: 229 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQIT 288
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIE 358
Y F+ GL C+ +G A+ + M++
Sbjct: 289 YNTFVNGL------CQNDHVGH----------------------------ALKVMDVMVQ 314
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
+G P + T + + LCK + +E + + D+ ++N +++ LCT RL E
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A + +++ KG+ PDV +N L+ A C+ A +L+++M SGC+ + TYN LI
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+G++ AL L +M G TY ++++GLC++ ++ A EVF++ +
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494
Query: 539 ARSILSTFMISLCR 552
+T + LC+
Sbjct: 495 NAITFNTLIDGLCK 508
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 189/414 (45%), Gaps = 19/414 (4%)
Query: 153 GPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS-- 210
GPE+ ++ L + G +D + EM G + GV + F ++ + Q+
Sbjct: 73 GPEVYEEIIRKLGAVGALDLMKVLVAEMRREG---HQVKLGV-VHSFLDSYEGQQLFDDA 128
Query: 211 ---MLDEVRK----RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+L++++ + ++++ ++ VL+ +G +++ V E+ R KPD +
Sbjct: 129 VDLILNQLQPLFGIQADTVVYNHLLNVLV-----EGSKMKLLESVYSEMGARGIKPDVVT 183
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+ + + V ++L++ GVAP + + G + E I A + ++
Sbjct: 184 FNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML 243
Query: 324 SGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+ +N LI + A+ + I G P T + LC+ +
Sbjct: 244 EMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVG 303
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
++V V+ + D+ +YN++V+ LC +G+L EA G++ +M +G PD++ +N+L+
Sbjct: 304 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI 363
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
A C + L A L Q+ G S ++ T+NILI+ +VG+ ALRLF M G
Sbjct: 364 AALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCT 423
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
PD TY +L++ LC L A ++ + + +T + LC+++ I
Sbjct: 424 PDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 477
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 177/403 (43%), Gaps = 10/403 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMF 177
D Y + L Q + A V + + D N ++ L +G ++ A +
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 344
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGF 236
++M RG F I C +L + L + +V + ++ V ++I+
Sbjct: 345 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG---VSPDVYTFNILINAL 401
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
CK A ++ +E++ C PD + Y + + +G + + +LK G T
Sbjct: 402 CKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRST 461
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRSAIVFF 353
Y I GL + RI EA+E+ + + + + N LI + ID A
Sbjct: 462 ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKID--DAFELI 519
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
N MI +G P T +++ + CK+ + ++ + ++AN + D+ +Y +++ LC +
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKA 579
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
GR + A V++ M+ KG+ P YN ++++ R + +R A L+ +M G + TY
Sbjct: 580 GRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTY 639
Query: 474 NILISKFSEVG-EIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
I+ G I+ A M++KG P+ +++ L EGL
Sbjct: 640 KIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 231/498 (46%), Gaps = 44/498 (8%)
Query: 78 PNFTHSPLSY----HSILKSLSLSRQINAIDSVLKQVKVNKITL-------------DSS 120
PNF H+ LS H +++S LS + + ++++ V+++ + + S
Sbjct: 97 PNFKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDS 156
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
V+ +I + +Q + ++A+ F ++ + + CN+L+ L G+++ A +++ E+
Sbjct: 157 VFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEI 216
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
S GV + + + C++ K+ +V + L EV+ E + V +I +
Sbjct: 217 SRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQ--EKGVYPDIVTYNTLISAYSSQG 274
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+EEAF+++ + + P Y V G + V + + G++P + YR
Sbjct: 275 LMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 334
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTID---DDVLNALI--GSVSSIDPRS-----AI 350
++ EA + G+ + + D DV+ L+ S+ S+ RS A+
Sbjct: 335 SLLM---------EACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 385
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
++FN + E G +P + L + C++ E + + + D+ +YN ++ L
Sbjct: 386 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGL 445
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C L EA + EM +GL PD L++ C+ L+ A +L+ +M ++
Sbjct: 446 CKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDV 505
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TYN L+ F +VG+I+ A ++ +M+ K + P +++ L+ LC + +L AF V+
Sbjct: 506 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVW-- 563
Query: 531 SVNHDVMLARSILSTFMI 548
D M+++SI T MI
Sbjct: 564 ----DEMISKSIKPTVMI 577
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 221/466 (47%), Gaps = 22/466 (4%)
Query: 56 INPYLLTHHSLALGF---------FNWASQQPNFTHSP--LSYHSILKSLSLSRQINAID 104
+ P ++T+++L + F P+ SP +Y++++ L +
Sbjct: 256 VYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAK 315
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE-IC-NSLLA 162
V ++ + ++ DS+ YR ++ + + + ++F++++ D+ P+ +C +S+++
Sbjct: 316 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMR--SRDVVPDLVCFSSMMS 373
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
+ G +D AL F+ + G+ + + + I +C + + +++ +E+ ++ +M
Sbjct: 374 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAM 433
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
V I+HG CK K + EA K+ +E+ R PD I+ + +G++
Sbjct: 434 --DVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAME 491
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+ KK ++ + Y + G I AKE+ +VS + + L+ ++
Sbjct: 492 LFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALC 551
Query: 343 SIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKR-NKSDELVEVYKVLSANDYFTDM 400
S S A ++ MI K PT+ +++ K C+ N SD + + K++S + D
Sbjct: 552 SKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEG-FVPDC 610
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRK--GLDPDVSFYNSLMEACCREDLLRPAKKLW 458
SYN ++ + +A+G++++M+ K GL PDV YNS++ CRE+ ++ A+ +
Sbjct: 611 ISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVL 670
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
+M G + + TY LI+ F + A R ML++G +PD
Sbjct: 671 RKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 122/257 (47%), Gaps = 3/257 (1%)
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKG 360
I + R++ EA E ++ S +T+ D NALIGS+ I A + + G
Sbjct: 161 LIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSG 220
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
+ TL+ + LCK K +++ + + D+ +YN ++S + G + EA+
Sbjct: 221 VGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAF 280
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
++ M KG P V YN+++ C+ AK+++ +M SG S + TY L+ +
Sbjct: 281 ELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 340
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
+ G+ +F +M + V PD ++S++ + NL A FN SV ++
Sbjct: 341 CKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN-SVKEAGLIPD 399
Query: 541 SILSTFMI-SLCRRVLI 556
+++ T +I CR+ +I
Sbjct: 400 NVIYTILIQGYCRKGMI 416
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/352 (19%), Positives = 140/352 (39%), Gaps = 58/352 (16%)
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
+S +N + +L+Q +D Y I+ L + K +A +FNE+ + P+
Sbjct: 416 ISEAMNLRNEMLQQ----GCAMDVVTYNTILHGLCKRKMLGEADKLFNEM--TERGLFPD 469
Query: 156 ICNSLLAVLASDGY-----IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS 210
S + DG+ + NA+++F +M + ++ + + + F K+G +
Sbjct: 470 ---SYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGF---GKVGDI-- 521
Query: 211 MLDEVRKRENSMINGSVIAV-----LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
D ++ M++ ++ ++++ C + EAF+V DE+ + KP +
Sbjct: 522 --DTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICN 579
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + + G+ + E+ L+K G P Y I G + E + +A
Sbjct: 580 SMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKA---------- 629
Query: 326 KFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
G V ++ + + G VP + T +++ C+ N+ E
Sbjct: 630 ------------FGLVKKMEEK----------QGGLVPDVFTYNSILHGFCRENQMKEAE 667
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
V + + D +Y +++ + L EA+ EM ++G PD F
Sbjct: 668 AVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDDKF 719
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 179/366 (48%), Gaps = 15/366 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N +L L S G AL++ +M + + + I FC ++ L ++ E+R+
Sbjct: 45 NIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREMRE 100
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR-ECKPDFIAYRIV----AEEFK 272
R N +I G+CK RV+EA KV DE+ + E KP+ + Y + ++ K
Sbjct: 101 RGGIAPNQYTYGT-VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 159
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
L ++ R+ ++++ GVA Y + L ++ R EA EL E + D
Sbjct: 160 LDTALLYRDRMVER----GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 215
Query: 333 VLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
N LI G + + A+ F M +G T+ T ++L L K+ + E +++
Sbjct: 216 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEA 275
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
D+ YN +++ TSG + A+ ++ EM++K + PD YN+LM C +
Sbjct: 276 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 335
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A+KL D+M G +L TYN LIS +S G+++ ALR+ + M+ KG P TY +L
Sbjct: 336 DEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 395
Query: 512 LEGLCQ 517
++GLC+
Sbjct: 396 IQGLCK 401
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 155/383 (40%), Gaps = 81/383 (21%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A +F +M + T F + + C K + L +L ++ R N++ +VIA
Sbjct: 25 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM-PRPNAVTYNTVIA--- 80
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
GFC RV+ A ++ E+R R G+
Sbjct: 81 --GFCSRGRVQAALDIMREMRERG----------------------------------GI 104
Query: 293 APRTNDYREFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRS 348
AP Y I G R+ EA K E++ G+ + + NALIG +D +
Sbjct: 105 APNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLD--T 162
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+++ + M+E+G T++T YN++V
Sbjct: 163 ALLYRDRMVERGVAMTVAT-----------------------------------YNLLVH 187
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L GR EAY +++EM KGL PDV YN L+ C+E ++ A ++++ M G
Sbjct: 188 ALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRA 247
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ TY LI S+ G+++ +LF + +G+ PD Y +L+ N+ AFE+
Sbjct: 248 TVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM 307
Query: 529 NKSVNHDVMLARSILSTFMISLC 551
+ + +T M LC
Sbjct: 308 GEMEKKRIAPDDVTYNTLMRGLC 330
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 124/297 (41%), Gaps = 46/297 (15%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L DG A ++ +EM +G+ + + I C+ + + L + + + +
Sbjct: 183 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 242
Query: 218 RENSMINGSVIAVL-IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
R + +V+ +I+ K +V+E K+ DE R +PD + Y + G+
Sbjct: 243 RG---VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 299
Query: 277 V---FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
+ FE ++KKR +AP Y + GL + R+ EA++L + + D
Sbjct: 300 IDRAFEIMGEMEKKR---IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVT 356
Query: 334 LNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
N LI S D + A+ N M+ KG PTL T
Sbjct: 357 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT------------------------- 391
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
YN ++ LC +G+ +A +++EM G+ PD S Y SL+E ED
Sbjct: 392 ----------YNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED 438
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 111/263 (42%), Gaps = 2/263 (0%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+ ++ +L + + +++++ + D Y +I + N +KA +F +
Sbjct: 181 TYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENM 240
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
SL+ L+ G + K+FDE RG+ + + I + +
Sbjct: 241 SRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNI 300
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ ++ E+ K+ + V ++ G C RV+EA K++DE+ R +PD + Y
Sbjct: 301 DRAFEIMGEMEKKR--IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYN 358
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + + G V + + + G P Y I GL + +A+ + + +V
Sbjct: 359 TLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 418
Query: 326 KFTIDDDVLNALIGSVSSIDPRS 348
T DD +LI +++ D R+
Sbjct: 419 GITPDDSTYISLIEGLTTEDERA 441
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/505 (22%), Positives = 223/505 (44%), Gaps = 34/505 (6%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINA 102
R+ LS SLV V+ L+ S + FF WA +Q + H+ Y++++ +
Sbjct: 126 FREKLSESLVIEVLR--LIERPSAVISFFVWAGRQIGYKHTSPVYNALVDLIVRDDDEKV 183
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDI----GPEICN 158
+ +L+Q++ + D V+ + L++ +FS+ E +D N
Sbjct: 184 PEELLQQIRDD----DKEVFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYN 239
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
L+ +D+A + EMS + + + C+ K + L++++
Sbjct: 240 CLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTLMET---- 295
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+ + +V +I G C+ EEA L+ +R C P+ + Y + L G +
Sbjct: 296 -ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTL-----LCGCLN 349
Query: 279 EREV-----VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
++++ VL G P + + A +L + +V T V
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVV 409
Query: 334 LNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLST--------LSNLSKNLCKRNKSDELV 385
N LIGS+ D S + EK L+T +S+ ++ LC K ++
Sbjct: 410 YNILIGSICG-DKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAF 468
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
V + + + D +Y+ ++ +LC + ++ A+ + +EMKR GL DV Y ++++
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+ L+ A+K +++M GC+ N+ TY LI + + ++ A LF ML +G P+
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNK 530
TY++L++G C+ ++ A ++F +
Sbjct: 589 VTYSALIDGHCKAGQMEKACQIFER 613
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 106/482 (21%), Positives = 189/482 (39%), Gaps = 46/482 (9%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT------- 135
SP ++S++ + S + +LK++ T VY +I S+ K++
Sbjct: 371 SPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLE 430
Query: 136 --QKAFS-------VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVE 186
+KA+S V N++ + S L S G + A + EM +G
Sbjct: 431 LAEKAYSEMLATGVVLNKINVS----------SFTRCLCSAGKYEKAFSVIREMIGQGFI 480
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
T + + C +K+ + +E+++ ++ +++ FCK +E+A
Sbjct: 481 PDTSTYSKVLGYLCNASKMELAFLLFEEMKR--GGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
K +E+R C P+ + Y + + V + + G P Y I G
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 307 I----------VERRICEAKELGEVIVSGKFTIDDD-------VLNALIGSVSSIDP-RS 348
+ R+C +K++ +V + K DD+ + AL+ +
Sbjct: 599 CKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEE 658
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A + M +G P L LCK K DE EV +S + + + +Y+ ++
Sbjct: 659 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLID 718
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
R A V+ +M P+V Y +++ C+ A KL M GC
Sbjct: 719 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 778
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ TY +I F +G+IE L L M KGVAP+ TY L++ C+ L A +
Sbjct: 779 NVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLL 838
Query: 529 NK 530
+
Sbjct: 839 EE 840
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 173/435 (39%), Gaps = 41/435 (9%)
Query: 110 VKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGY 169
V +NKI + S L +KAFSV E+ IG GY
Sbjct: 444 VVLNKINVSS-----FTRCLCSAGKYEKAFSVIREM------IGQGFIPDTSTYSKVLGY 492
Query: 170 IDNALKM------FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
+ NA KM F+EM G+ + + + FC+ + Q +E+R E
Sbjct: 493 LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR--EVGCT 550
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV------AEEFKLMGSV 277
V +IH + K K+V A ++ + + C P+ + Y + A + + +
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQI 610
Query: 278 FEREVVLKKKRKLGVAPRTND-----------YREFILGLIVERRICEAKELGEVIVSGK 326
FER K + + + D Y + G R+ EA++L + +
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEG 670
Query: 327 FTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ V +ALI V +D + M E G TL T S+L K + D
Sbjct: 671 CEPNQIVYDALIDGLCKVGKLDEAQEVK--AEMSEHGFPATLYTYSSLIDRYFKVKRQDL 728
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+V + N ++ Y M+ LC G+ EAY ++Q M+ KG P+V Y ++++
Sbjct: 729 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 788
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
R + +L ++M + G + N TY +LI + G ++ A L M +
Sbjct: 789 GFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 848
Query: 504 DATTYTSLLEGLCQE 518
A Y ++EG +E
Sbjct: 849 HAAGYRKVIEGFNKE 863
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 103/503 (20%), Positives = 207/503 (41%), Gaps = 75/503 (14%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +L L + ++ + +++K + D Y ++ S + ++A FNE+
Sbjct: 485 TYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 146 KFNCEDIG--PEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ ++G P + +L+ + A ++F+ M G + + + I C+
Sbjct: 545 R----EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 202 NAKLGQVLSML--------------------DEVRKRENSMINGSVIAVLIIHGFCKGKR 241
++ + + D+ +R N +I G+ ++ GFCK R
Sbjct: 601 AGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGA-----LLDGFCKLHR 655
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
VEEA K+LD + + C+P+ I Y + + +G + E + V + + G Y
Sbjct: 656 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSS 715
Query: 302 FILGLI-VERRICEAKELGEVI---VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMI 357
I V+R+ +K L +++ + I ++++ L V D A M
Sbjct: 716 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC-KVGKTD--EAYKLMQMME 772
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
EKG P + T + + + K + +E+ + + + + +Y V++ C +G L
Sbjct: 773 EKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALD 832
Query: 418 EAYGVIQEMKRK------------------------------GLD---PDVSFYNSLMEA 444
A+ +++EMK+ G D P +S Y L++
Sbjct: 833 VAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDN 892
Query: 445 CCREDLLRPAKKLWDQM--FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+ L A +L +++ F++ TYN LI +++ A RLF M +KGV
Sbjct: 893 LIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVI 952
Query: 503 PDATTYTSLLEGLCQETNLQAAF 525
P+ T+ SL++GL + + + A
Sbjct: 953 PEMQTFCSLIKGLFRNSKISEAL 975
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 141/380 (37%), Gaps = 54/380 (14%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A K + EM GV + I F C K + S++ E+ + I + +
Sbjct: 432 AEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ--GFIPDTSTYSKV 489
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
+ C ++E AF + +E++ D Y I+ + F G + + + R++G
Sbjct: 490 LGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVF 352
P Y I + +++ A EL
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANEL---------------------------------- 575
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F M+ +G +P + T S L CK + ++ ++++ + + D++ Y
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMY--------- 626
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
Q P+V Y +L++ C+ + A+KL D M GC N
Sbjct: 627 ---------FKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIV 677
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
Y+ LI +VG+++ A + M E G TY+SL++ + A +V +K +
Sbjct: 678 YDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 737
Query: 533 NHDVMLARSILSTFMISLCR 552
+ I + + LC+
Sbjct: 738 ENSCAPNVVIYTEMIDGLCK 757
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 134/310 (43%), Gaps = 17/310 (5%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
++L+ L G +D A ++ EMS G + + I ++ + + +L ++
Sbjct: 679 DALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML- 737
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
ENS VI +I G CK + +EA+K++ + + C+P+ + Y + + F +G +
Sbjct: 738 -ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKI 796
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+L++ GVAP YR I + A L E + + +
Sbjct: 797 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKV 856
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGR---VPTLSTLSNLSKNLCKRNKSD---ELVEVYKVL 391
I + + I + E G+ P LS L NL K + + L+E
Sbjct: 857 IEGFN----KEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATF 912
Query: 392 SAN--DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
SA DY + +YN ++ LC + ++ +A+ + EM +KG+ P++ + SL++ R
Sbjct: 913 SATLVDYSS---TYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNS 969
Query: 450 LLRPAKKLWD 459
+ A L D
Sbjct: 970 KISEALLLLD 979
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 3/170 (1%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P+ ST + L + K + D V++ +S + D + LC G+ REA +
Sbjct: 233 PSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTL 292
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
M+ + PD FY L+ C L A ++M A+ C N+ TY+ L+
Sbjct: 293 ---METENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
++ R+ + M+ +G P + SL+ C + A+++ K V
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMV 399
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 75/196 (38%), Gaps = 6/196 (3%)
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
VP + L LC+ + +E ++ + A ++ +Y+ ++ +L
Sbjct: 299 VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKR 358
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
V+ M +G P +NSL+ A C A KL +M G + YNILI
Sbjct: 359 VLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSIC 418
Query: 482 EVGE------IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
+ +E A + + ML GV + +S LC + AF V + +
Sbjct: 419 GDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 478
Query: 536 VMLARSILSTFMISLC 551
+ S S + LC
Sbjct: 479 FIPDTSTYSKVLGYLC 494
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 120 SVYRFIIPSLIQGKNTQKAFSVFNEVK-FNCEDIG-PEICNSLLAVLASDGYIDNALKMF 177
S+YR ++ +LI+ + + A + EV F+ + NSL+ L +D A ++F
Sbjct: 884 SLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLF 943
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
EMS +GV F I N+K+ + L +LD
Sbjct: 944 SEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLD 979
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 199/446 (44%), Gaps = 40/446 (8%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV- 145
+ L S + +Q + + S+ Q+ + +T + +I L + + A S+ ++
Sbjct: 91 FGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMF 150
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
K N+L+ L ++G I A+++F+EM RG E + I + I C K
Sbjct: 151 KLGIHPTASTF-NALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLC---KT 206
Query: 206 GQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
G +D +K E + V+ II CK + V +A + L E+ R P+ Y
Sbjct: 207 GNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTY 266
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ F ++G + E + K+ V P T + GL E + EA+
Sbjct: 267 NCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEAR-------- 318
Query: 325 GKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ F M EKG P +ST + L C + +E
Sbjct: 319 --------------------------LVFETMTEKGVEPNISTYNALMDGYCLQRLMNEA 352
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+V++++ + SYN++++ C S R+ EA ++ EM K L+PD Y++LM+
Sbjct: 353 KKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQG 412
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C+ + A ++ +M + G NL TY+IL+ F + G ++ AL+L +M EK + P+
Sbjct: 413 LCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPN 472
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNK 530
+T L+EG+ L+ A E+F+K
Sbjct: 473 IVHHTILIEGMFIAGKLEVAKELFSK 498
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 204/454 (44%), Gaps = 5/454 (1%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
TH+ S + ++ L ++ S+L ++ I +S + +I L ++A
Sbjct: 120 THNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVE 179
Query: 141 VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+FNE+ + N+++ L G A+ +F +M G + + + I C
Sbjct: 180 LFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLC 239
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
++ + + L E+ R I +V ++HGFC ++ EA ++ E+ R+ P
Sbjct: 240 KDRLVNDAMEFLSEMLDRG---IPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMP 296
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D + I+ + G V E +V + + GV P + Y + G ++R + EAK++
Sbjct: 297 DTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVF 356
Query: 320 EVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
E+++ N LI G S A M K P T S L + LC+
Sbjct: 357 EIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQF 416
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+ E + ++K + + ++ +Y++++ C G L EA +++ M+ K L+P++ +
Sbjct: 417 GRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHH 476
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
L+E L AK+L+ ++FA G ++TY ++I + G + A LF M +
Sbjct: 477 TILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMED 536
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
G P++ +Y +++G Q + A + ++ V
Sbjct: 537 DGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMV 570
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 146/322 (45%), Gaps = 34/322 (10%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I+G C +++EA ++ +E+ R +P+ I+Y + G+ V KK + G
Sbjct: 164 LINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNG 223
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
P Y I L +R + +A E
Sbjct: 224 CKPDVVTYNTIIDSLCKDRLVNDAME---------------------------------- 249
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F + M+++G P + T + + C + +E ++K + D D + ++V LC
Sbjct: 250 FLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLC 309
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
G + EA V + M KG++P++S YN+LM+ C + L+ AKK+++ M GC+ +
Sbjct: 310 KEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVH 369
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
+YNILI+ F + ++ A L M K + PD TY++L++GLCQ + A +F +
Sbjct: 370 SYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEM 429
Query: 532 VNHDVMLARSILSTFMISLCRR 553
++ ++ S + C+
Sbjct: 430 CSYGLLPNLVTYSILLDGFCKH 451
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 179/396 (45%), Gaps = 9/396 (2%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFN-CEDIGPEIC--NSLLAVLASDGYIDNALKMFD 178
Y II L + NT A VF +++ N C+ P++ N+++ L D +++A++
Sbjct: 196 YNTIINGLCKTGNTSMAVDVFKKMEQNGCK---PDVVTYNTIIDSLCKDRLVNDAMEFLS 252
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
EM RG+ + + + FC +L + + E+ R+ ++ +V +++ G CK
Sbjct: 253 EMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRD--VMPDTVTLTILVDGLCK 310
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
V EA V + + + +P+ Y + + + L + E + V + + G AP +
Sbjct: 311 EGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHS 370
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMI 357
Y I G RR+ EAK L + D + L+ + P+ A+ F M
Sbjct: 371 YNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMC 430
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
G +P L T S L CK DE +++ K + ++ + +++ + +G+L
Sbjct: 431 SYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLE 490
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
A + ++ G+ P + Y +++ +E L A L+ +M G N +YN++I
Sbjct: 491 VAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMI 550
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
F + + A+RL M+ K + + +T+ LL+
Sbjct: 551 QGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 112/224 (50%), Gaps = 1/224 (0%)
Query: 334 LNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
LN LI + ++ A+ M + G PT ST + L LC K E VE++ +
Sbjct: 126 LNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMV 185
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ ++ SYN +++ LC +G A V ++M++ G PDV YN+++++ C++ L+
Sbjct: 186 RRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVN 245
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A + +M G N+ TYN ++ F +G++ A RLF M+ + V PD T T L+
Sbjct: 246 DAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILV 305
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+GLC+E + A VF V S + M C + L+
Sbjct: 306 DGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLM 349
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 104/221 (47%), Gaps = 1/221 (0%)
Query: 337 LIGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
+GS + S +V N M G + +L+ L LC+ N D V + +
Sbjct: 94 FLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLG 153
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
++N +++ LC G+++EA + EM R+G +P+V YN+++ C+ A
Sbjct: 154 IHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAV 213
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
++ +M +GC ++ TYN +I + + A+ ML++G+ P+ TY ++ G
Sbjct: 214 DVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGF 273
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
C L A +F + V DVM L+ + LC+ ++
Sbjct: 274 CILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMV 314
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 95/194 (48%), Gaps = 2/194 (1%)
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
SID A+ F M+ P+++ + K+ + +V + + ++ S
Sbjct: 68 SID--DALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYS 125
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
NV+++ LC + A ++ +M + G+ P S +N+L+ C E ++ A +L+++M
Sbjct: 126 LNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMV 185
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G N+ +YN +I+ + G A+ +F M + G PD TY ++++ LC++ +
Sbjct: 186 RRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVN 245
Query: 523 AAFEVFNKSVNHDV 536
A E ++ ++ +
Sbjct: 246 DAMEFLSEMLDRGI 259
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 172/415 (41%), Gaps = 54/415 (13%)
Query: 82 HSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
H P +SY++I+ L + + V K+++ N D Y II SL + + A
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248
Query: 140 SVFNEV----------KFNC-----------------------EDIGPEICNSLLAV--L 164
+E+ +NC D+ P+ + V L
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI- 223
+G + A +F+ M+ +GVE + + + +C + +++E +K MI
Sbjct: 309 CKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYC-------LQRLMNEAKKVFEIMIR 361
Query: 224 NGSVIAV----LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
G V ++I+GFCK +R++EA +L E+ + PD + Y + + G E
Sbjct: 362 QGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKE 421
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
+ K+ G+ P Y + G + EA +L + + K ++ ++++ I
Sbjct: 422 ALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKK--LEPNIVHHTIL 479
Query: 339 --GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
G + A F+ + G PT+ T + + K L K SDE ++++ + + +
Sbjct: 480 IEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGF 539
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+ SYNVM+ + A +I EM K ++S + L++ +++++
Sbjct: 540 LPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDLESQDEII 594
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 60/121 (49%)
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
T+ + +A M R P V+ + + + ++ L +QM G + N+
Sbjct: 65 TNISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVY 124
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
+ N+LI+ + ++ A+ + M + G+ P A+T+ +L+ GLC E ++ A E+FN+
Sbjct: 125 SLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEM 184
Query: 532 V 532
V
Sbjct: 185 V 185
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 205/482 (42%), Gaps = 46/482 (9%)
Query: 88 HSILKSLSLSRQI--NAIDSVLKQVK-VNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
HS L S +Q+ +A+D +L Q++ + I D+ VY ++ L++G + SV++E
Sbjct: 21 HSFLDSYE-GQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSE 79
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ I P++ N+L+ L + A+ M +EMS RGV F + F E
Sbjct: 80 M--GARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEE 137
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF---------------- 246
+ L + + R E V ++I+G+CK RVE+A
Sbjct: 138 GSIEAALRV--KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 195
Query: 247 -------------------KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
KV+D + PD Y IV G + E + +L +
Sbjct: 196 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 255
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DP 346
G P + I L R+ EA +L + + D N LI ++ + DP
Sbjct: 256 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 315
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A+ F M G P T + L NLC K + +++ K + + +YN +
Sbjct: 316 HLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 375
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC R+ EA V +M +G+ + +N+L++ C++ + A +L +QM + G
Sbjct: 376 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 435
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
N TYN +++ + + G+I+ A + M G D TY +L+ GLC+ Q A +
Sbjct: 436 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 495
Query: 527 VF 528
V
Sbjct: 496 VL 497
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 154/332 (46%), Gaps = 1/332 (0%)
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
+V+ +++ +G +++ V E+ R KPD + + + + V ++L+
Sbjct: 54 TVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLE 113
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID 345
+ GVAP + + G + E I A + ++ + +N LI +
Sbjct: 114 EMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLG 173
Query: 346 P-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
A+ + I G P T + LC+ + ++V V+ + D+ +YN
Sbjct: 174 RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYN 233
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
++V+ LC +G+L EA G++ +M +G PD++ +N+L+ A C + L A L Q+
Sbjct: 234 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 293
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G S ++ T+NILI+ +VG+ ALRLF M G PD TY +L++ LC L A
Sbjct: 294 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 353
Query: 525 FEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
++ + + +T + LC+++ I
Sbjct: 354 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 385
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 170/397 (42%), Gaps = 36/397 (9%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+ N LL VL + ++ EM RG++ + F + C ++ + ML+E+
Sbjct: 56 VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEM 115
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
R + ++ GF + +E A +V + C + ++ + +G
Sbjct: 116 SSR--GVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLG 173
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
V + ++++ G P Y F+ GL C+ +G
Sbjct: 174 RVEDALGYIQQEIADGFEPDQITYNTFVNGL------CQNDHVGH--------------- 212
Query: 336 ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
A+ + M+++G P + T + + LCK + +E + +
Sbjct: 213 -------------ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 259
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D+ ++N +++ LCT RL EA + +++ KG+ PDV +N L+ A C+ A
Sbjct: 260 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLAL 319
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L+++M SGC+ + TYN LI +G++ AL L +M G TY ++++GL
Sbjct: 320 RLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGL 379
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
C++ ++ A EVF++ + +T + LC+
Sbjct: 380 CKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 416
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 177/403 (43%), Gaps = 10/403 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMF 177
D Y + L Q + A V + + D N ++ L +G ++ A +
Sbjct: 193 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 252
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGF 236
++M RG F I C +L + L + +V + ++ V ++I+
Sbjct: 253 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG---VSPDVYTFNILINAL 309
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
CK A ++ +E++ C PD + Y + + +G + + +LK G T
Sbjct: 310 CKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRST 369
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRSAIVFF 353
Y I GL + RI EA+E+ + + + + N LI + ID A
Sbjct: 370 ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKID--DAFELI 427
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
N MI +G P T +++ + CK+ + ++ + ++AN + D+ +Y +++ LC +
Sbjct: 428 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKA 487
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
GR + A V++ M+ KG+ P YN ++++ R + +R A L+ +M G + TY
Sbjct: 488 GRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTY 547
Query: 474 NILISKFSEVG-EIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
I+ G I+ A M++KG P+ +++ L EGL
Sbjct: 548 KIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 590
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 196/451 (43%), Gaps = 9/451 (1%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK--NTQKAFSVFNE 144
++ +L SL + + + S+ KQ+ ++ I + +I L + AFS +
Sbjct: 72 FNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGK 131
Query: 145 V-KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ K + +LL L S I +A+K+FDE+ G S I + I C
Sbjct: 132 MFKLGLQPTHVTF-GTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLC--- 187
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
K+G + L ++K E V+A +I CK +R EA E+ + P+ +
Sbjct: 188 KIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVV 247
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + F +G + E + K+ V P T + + GL E I EA+ + E++
Sbjct: 248 TYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMM 307
Query: 323 VSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
D +AL+ G A F+ M+ KG P++ + L CK +
Sbjct: 308 TENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRL 367
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+E + + D D +Y+ ++ C +GR + A + +EM GL PD Y+ L
Sbjct: 368 NEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSIL 427
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
++ C+ L A +L M S ++ YNILI G++E A LF N+ KG+
Sbjct: 428 LDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGI 487
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
P TYT ++ GL +E A E+F K V
Sbjct: 488 QPSVVTYTVMISGLLKEGLSNEACEMFRKMV 518
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 203/454 (44%), Gaps = 19/454 (4%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV--YRF 124
ALG QP TH +++ ++L L +I ID+V ++ K+ S+ Y
Sbjct: 128 ALGKMFKLGLQP--TH--VTFGTLLNGLCSKAKI--IDAVKLFDEIGKMGFAPSLITYTT 181
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEIC--NSLLAVLASDGYIDNALKMFDEM 180
II L + +T A + ++ E+ G P++ N+++ L D + A+ F EM
Sbjct: 182 IIKGLCKIGHTTNALQLLKKM----EEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEM 237
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
+G+ + + + + FC +L + S+ ++ R N M N +V +++ G CK
Sbjct: 238 VDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGR-NVMPN-TVTFTILVDGLCKEG 295
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+ EA +V + + +PD Y + + + L + E + + G AP Y
Sbjct: 296 MILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYN 355
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK 359
I G RR+ EAK L + T D + L+ G + P+ A F M
Sbjct: 356 ILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSY 415
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G +P T S L LCK DE + K + + + YN+++ +C G+L A
Sbjct: 416 GLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAA 475
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ + KG+ P V Y ++ +E L A +++ +M +GC N TYN+ I
Sbjct: 476 RELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQG 535
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
F G+ A+RL M+ +G + D++T+ LL+
Sbjct: 536 FLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 164/358 (45%), Gaps = 3/358 (0%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+++ L G+ NAL++ +M +G + + + I C++ + + + E+
Sbjct: 181 TIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMV-- 238
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+ + V I+HGFC ++ EA + ++ R P+ + + I+ + G +
Sbjct: 239 DQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMIL 298
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
E V + + GV P Y + G ++ ++ EA++L +++V F V N LI
Sbjct: 299 EARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILI 358
Query: 339 -GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
G S A + M ++ P T S L + C+ + +++K + +
Sbjct: 359 NGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLL 418
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D +Y++++ LC G L EA+ +++ M+ ++P + YN L++ C L A++L
Sbjct: 419 PDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAAREL 478
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ +F G ++ TY ++IS + G A +F M+ G P++ TY ++G
Sbjct: 479 FSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGF 536
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 142/322 (44%), Gaps = 34/322 (10%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+++G C ++ +A K+ DE+ P I Y + + +G +LKK + G
Sbjct: 147 LLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKG 206
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
P Y I L +RR EA +
Sbjct: 207 CKPDVVAYNTVIDSLCKDRRANEA----------------------------------MY 232
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
FF+ M+++G P + T S++ C + +E ++K + + + ++ ++V LC
Sbjct: 233 FFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLC 292
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
G + EA V + M G++PD Y++LM+ C + + A+KL+D M G + +++
Sbjct: 293 KEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVR 352
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
YNILI+ + + A L M ++ + PD TY++L++G CQ Q A ++F +
Sbjct: 353 VYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEM 412
Query: 532 VNHDVMLARSILSTFMISLCRR 553
++ ++ S + LC+
Sbjct: 413 CSYGLLPDSITYSILLDGLCKH 434
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 105/231 (45%), Gaps = 11/231 (4%)
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRV-PTLSTLSNLSKNLCKRNKS------DELV 385
V N L+GS+ S ++ ++ + P + TL+ L LC N+ L
Sbjct: 71 VFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALG 130
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
+++K+ + T + +++ LC+ ++ +A + E+ + G P + Y ++++
Sbjct: 131 KMFKLGLQPTHVT----FGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL 186
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+ A +L +M GC ++ YN +I + A+ F M+++G+ P+
Sbjct: 187 CKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNV 246
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
TY+S+L G C L A +F + + +VM + + LC+ +I
Sbjct: 247 VTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMI 297
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 207/445 (46%), Gaps = 17/445 (3%)
Query: 78 PNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQK 137
P+ + SP H +L + + +R + Q+K + + + ++ SL +
Sbjct: 44 PHLSASPSLPHLLLTASAAARPHATSLRLYAQLKSLSVPIPVASLHPLLSSL----PSAP 99
Query: 138 AFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
AF++F ++ + N +L L + G AL++ +M + + + I
Sbjct: 100 AFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPRP----NAVTYNTVIA 155
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR-E 256
FC ++ L ++ E+R+R + A LI G+CK R+E+A KV DE+ + E
Sbjct: 156 GFCARGRVQAALEVMREMRERGGIAPDKYTYATLI-SGWCKIGRMEDAVKVFDEMLTKGE 214
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL---GVAPRTNDYREFILGLIVERRIC 313
P + Y + + +G + +V L+ + + G+A Y + L ++ R
Sbjct: 215 VAPSAVMYNALIGGYCDVGKL---DVALQYREDMVQRGIAMTVATYNLLMHALFMDARAS 271
Query: 314 EAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
+A + E + F+ D N LI G + + A+ F M +KG T T ++L
Sbjct: 272 DAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLI 331
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
++ + E ++ V D+ YN +++ CT G + AY ++ EM++K +
Sbjct: 332 YVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIP 391
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
PD YN+LM C L A+ L D+M G +L +YN LIS +S G+I+ ALR+
Sbjct: 392 PDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRV 451
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQ 517
M++KG P TY +L++GLC+
Sbjct: 452 RDEMMDKGFNPTLMTYNALIQGLCK 476
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 156/382 (40%), Gaps = 85/382 (22%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A +F ++ + T F + + C K + L +L ++ R N++ +VIA
Sbjct: 100 AFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQM-PRPNAVTYNTVIA--- 155
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
GFC RV+ A +V+ E+ + + G+
Sbjct: 156 --GFCARGRVQAALEVMREM----------------------------------RERGGI 179
Query: 293 APRTNDYREFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALIGS---VSSIDPRS 348
AP Y I G R+ +A K E++ G+ + NALIG V +D
Sbjct: 180 APDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLD--V 237
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ + M+++G T++T YN+++
Sbjct: 238 ALQYREDMVQRGIAMTVAT-----------------------------------YNLLMH 262
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L R +AY V++EM++ G PDV YN L+ C+E + A +++++M G
Sbjct: 263 ALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRA 322
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
TY LI FS G+++ RLF+ ++KG+ PD Y +L+ C +++ A+E+
Sbjct: 323 TAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIM 382
Query: 529 ----NKSVNHDVMLARSILSTF 546
K + D M +++ F
Sbjct: 383 AEMEKKRIPPDDMTYNTLMRGF 404
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
++N+M+ LC +G+ A ++++M R P+ YN+++ C ++ A ++ +M
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREM 173
Query: 462 FA-SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG-VAPDATTYTSLLEGLCQET 519
G + + TY LIS + ++G +E A+++F ML KG VAP A Y +L+ G C
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVG 233
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
L A + V + + + + M +L
Sbjct: 234 KLDVALQYREDMVQRGIAMTVATYNLLMHAL 264
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 218/491 (44%), Gaps = 48/491 (9%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQV--KVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
+ ++Y +++ L + +++ ++L+Q+ K N TL + Y +I L + ++A
Sbjct: 110 TTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKT--YTVVIDGLSKAGRVEEARR 167
Query: 141 VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSH----RGVEFSTIGFGVFI 196
+F ++ N + +L++ LA G +D AL ++M RGVE + + I
Sbjct: 168 IFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVI 227
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
+ C + L L+ DE+ ++S+ ++ CK +R EEA + ++ R
Sbjct: 228 RQLCASGNLEDALAYFDEL---DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERR 284
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C P Y + + F +G + E + LK+ + G P Y I GL R+ E
Sbjct: 285 CFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 344
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSV--SSIDPRSAIVF---------------------- 352
E + + + D ALI + + P++ V+
Sbjct: 345 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 404
Query: 353 ------------FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
F M E+G V T+ T S L C VE+++ + ++
Sbjct: 405 CKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNL 464
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC-REDLLRPAKKLWD 459
SYN+++ LC +G+L +AY +++ ++ L PDV +NS + C R D + +L++
Sbjct: 465 VSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFE 524
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
M + G S NL +Y+IL+ G +E L +FH M+ +GVAPD + +L+ LC
Sbjct: 525 SMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAG 584
Query: 520 NLQAAFEVFNK 530
+ A EVF +
Sbjct: 585 RVDEALEVFRE 595
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 195/428 (45%), Gaps = 20/428 (4%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEIC--NSLLAVLASDGYIDNAL 174
D + +I L + K +AFSV V+ CE P+ N + L +D+A
Sbjct: 40 DMVAFTVVINGLCREKRLDEAFSVLERAVRAGCE---PDYVTYNVFIDGLCKAERVDDAF 96
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIH 234
++ +M + +T+ + + + +L + +++L+++ ++ NS + ++I
Sbjct: 97 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTY--TVVID 154
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
G K RVEEA ++ ++ C+PD Y + +G + E V L + + G A
Sbjct: 155 GLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCAR 214
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL-------NALIGSVSSID-P 346
+ ++ +V R++C + L + + F DD L N L+ ++ +
Sbjct: 215 GVEP--DVVIHNLVIRQLCASGNLEDAL--AYFDELDDSLDLTHFTFNPLVAALCKAERT 270
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
AI F M E+ PTL T ++L K + DE + K + D +Y +
Sbjct: 271 EEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSI 330
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC GR+ E EM+ +G +PD Y +L++ + ++ A +++ QM SG
Sbjct: 331 IDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGT 390
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ TYNI++ + G + A F M E+G TY++L++G C E N+ AA E
Sbjct: 391 VVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVE 450
Query: 527 VFNKSVNH 534
+F + ++
Sbjct: 451 LFRRMLDR 458
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 139/317 (43%), Gaps = 15/317 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
S++ L G ++ + F EM +RG E + + I F + M+ + +
Sbjct: 328 TSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKA-------KMIPKAHR 380
Query: 218 RENSMI-NGSVIAV----LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
M+ +G+V++ +I+ G CK RV EA+ + R C + Y + + F
Sbjct: 381 VYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFC 440
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
G+V + ++ G P Y I GL ++ +A E ++ + D
Sbjct: 441 SEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVY 500
Query: 333 VLNALI-GSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
N+ + G +D + F M+ +G P L + S L +C+ + +E++
Sbjct: 501 TFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHE 560
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ + D+ +N ++ +LC +GR+ EA V +E++R+ PD Y SL++A R +
Sbjct: 561 MVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSA-PDAWSYWSLLDALSRCER 619
Query: 451 LRPAKKLWDQMFASGCS 467
+ A+ L M GC+
Sbjct: 620 MEEARLLSFHMKLQGCA 636
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
MI++ V T + L LCK + D + + + + DM ++ V+++ LC R
Sbjct: 1 MIDRKLVDT-RVCTALLNGLCKTGQLDRAMLLLDEMPCS---PDMVAFTVVINGLCREKR 56
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L EA+ V++ R G +PD YN ++ C+ + + A +L +M C TY
Sbjct: 57 LDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTA 116
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
L+ + G ++ A+ + M+EKG +P TYT +++GL + ++ A +F
Sbjct: 117 LVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIF 169
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D +++ LC +G+L A ++ EM PD+ + ++ CRE L A
Sbjct: 6 LVDTRVCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFS 62
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ ++ +GC + TYN+ I + ++ A +L M EK P TYT+L++GL
Sbjct: 63 VLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLL 122
Query: 517 QETNLQAAFEVFNKSVN 533
+ L A + + V
Sbjct: 123 KAGRLDEAMAILEQMVE 139
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 172/396 (43%), Gaps = 39/396 (9%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++A G +D A ++ +M +E + + I C + G L +LD++ +
Sbjct: 128 NAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLR 184
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R + V +++ CK ++A K+LDE+R + C PD I Y +V G V
Sbjct: 185 R--GCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRV 242
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ LK G P T Y + GL R +A++L
Sbjct: 243 DDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKL------------------- 283
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
M +KG P + T + L LC+R + +EV +
Sbjct: 284 ---------------MAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCT 328
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
+ SYN ++ C ++ A ++ M +G PD+ YN+L+ A CR + A +L
Sbjct: 329 PNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVEL 388
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
Q+ GC+ L +YN +I ++ G+ + AL L + M+ KG+ PD TY+++ GLC+
Sbjct: 389 LHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCR 448
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
E ++ A F K + + + + ++ LC+R
Sbjct: 449 EDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKR 484
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 180/393 (45%), Gaps = 9/393 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L G NAL + D+M RG + + + + C+ + Q + +LDE+R
Sbjct: 160 NTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRA 219
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + ++++G C+ RV++A + L L C+P+ ++Y IV +
Sbjct: 220 K--GCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERW 277
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ E ++ + + G P + I L + A E+ + I T + N +
Sbjct: 278 EDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPI 337
Query: 338 IGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ + A+ F M+ +G P + + + L LC+ + D VE+ L
Sbjct: 338 LHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC 397
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ SYN ++ L +G+ +EA ++ EM KGL PD+ Y+++ CRED + A +
Sbjct: 398 TPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIR 457
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ ++ G N YN ++ + E A+ LF M+ G P+ +TYT L+EGL
Sbjct: 458 AFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLT 517
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
E ++ A E+ + + +R ++S +I+
Sbjct: 518 YEGLVKEARELLGE------LCSRGVVSKGLIN 544
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 154/337 (45%), Gaps = 31/337 (9%)
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + L +++ + E S G A +I C R EA +VL C+PD +AY
Sbjct: 75 LEEALRLVESMSGLEPSAAPGPCAA--LIKKLCASGRTAEARRVL-----AACEPDVMAY 127
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + + G + + + + + P + Y I GL C G +V
Sbjct: 128 NAMVAGYCVTGQL---DAARRLVADMPMEPDSYTYNTLIRGL------CGRGRTGNALV- 177
Query: 325 GKFTIDD--------DVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+DD DV+ I + + A+ + M KG P + T + +
Sbjct: 178 ---VLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVN 234
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
+C+ + D+ +E K L ++ + SYN+++ LCT+ R +A ++ EM +KG P
Sbjct: 235 GICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPP 294
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+V +N L+ CR L+ PA ++ DQ+ GC+ N +YN ++ F + +++ A+
Sbjct: 295 NVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFV 354
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
M+ +G PD +Y +LL LC+ + AA E+ ++
Sbjct: 355 ELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 391
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 93/223 (41%), Gaps = 12/223 (5%)
Query: 76 QQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
Q P + +P LSY+ IL + ++++ + ++ + D Y ++ +L +G
Sbjct: 321 QIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGG 380
Query: 134 NTQKAFSVFNEVK-FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
A + +++K C + N+++ L G AL++ +EM +G++ I +
Sbjct: 381 EVDAAVELLHQLKDKGCTPVLISY-NTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITY 439
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVL 249
C ++ + + +V+ R N+++ + I+ G CK + A +
Sbjct: 440 STISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNA-----ILLGLCKRRETHNAIDLF 494
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
+ C P+ Y I+ E G V E +L + GV
Sbjct: 495 IYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGV 537
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/565 (22%), Positives = 234/565 (41%), Gaps = 94/565 (16%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQI-NAIDSVLKQVK---VNKITLDSS--------- 120
S PNF HS S+ +++ L SR++ +A +L+ V+ V+++ + S
Sbjct: 122 TSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCG 181
Query: 121 ----VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKM 176
V+ ++ + +Q + ++ F +K + CNSLL L G++D A ++
Sbjct: 182 SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEI 241
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
+ E+ GV+ + + I C+N K+ S L ++ E + V +I+ +
Sbjct: 242 YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME--EKGVFPDVVTYNTLINAY 299
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
C+ +EEAF+++D + + KP Y + G + VL + K+G++P T
Sbjct: 300 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 359
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-------------- 342
Y ++ + +A+ + + + S D +ALIG +S
Sbjct: 360 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 419
Query: 343 ----SIDPRSAIVFF------------------NFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ P + I + M+E+G V + T + + LCK
Sbjct: 420 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 479
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
E E++ ++ F D ++ +++ G + +A + + M ++ L PDV YN+
Sbjct: 480 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 539
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH------ 494
L++ C+ + +LW+ M + N +Y ILI+ + +G + A RL+
Sbjct: 540 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 599
Query: 495 -----------------------------NMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
NML KG+ PD TY +L+ G +E N+ AF
Sbjct: 600 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 659
Query: 526 EVFNKSVNH----DVMLARSILSTF 546
+ NK N DV+ IL+ F
Sbjct: 660 ALVNKMENSGLLPDVITYNVILNGF 684
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 171/387 (44%), Gaps = 9/387 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL + + +A ++FDEM +GV + F I +N L Q L +++
Sbjct: 363 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 422
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ +VI ++I GFC+ + EA KV DE+ + C D + Y + +
Sbjct: 423 A--GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKML 480
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E + + + + GV P + I G + + +A L E+++ D N L
Sbjct: 481 SEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTL 540
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G + +N MI + P + L C E ++ + +
Sbjct: 541 IDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGF 600
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ + N +V C +G +A + M KG+ PD YN+L+ +E+ + A
Sbjct: 601 EATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFA 660
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L ++M SG ++ TYN++++ FS G ++ A + M+E+GV PD +TYTSL+ G
Sbjct: 661 LVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHV 720
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSIL 543
+ NL+ AF V HD ML R +
Sbjct: 721 TQNNLKEAFRV------HDEMLQRGFV 741
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 195/427 (45%), Gaps = 15/427 (3%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y++I+ L + + VL ++ ++ D++ Y ++ + N A +F+E
Sbjct: 325 FTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDE 384
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ + + P++ + +L+ +L+ +G +D ALK F +M + G+ + + + I FC N
Sbjct: 385 MP--SQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRN 442
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRECK 258
+ + L + DE+ ++ G V+ V+ I++G CK K + EA ++ E+ R
Sbjct: 443 GVMSEALKVRDEMLEQ------GCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 496
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PDF + + + G++ + + + + + P Y I G + + EL
Sbjct: 497 PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 556
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
++S + + LI ++ S A ++ M+EKG T+ T + + K C+
Sbjct: 557 WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 616
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ + E + D +YN +++ + A+ ++ +M+ GL PDV
Sbjct: 617 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 676
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
YN ++ R+ ++ A+ + +M G + + TY LI+ ++ A R+ ML
Sbjct: 677 YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEML 736
Query: 498 EKGVAPD 504
++G PD
Sbjct: 737 QRGFVPD 743
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 137/275 (49%), Gaps = 4/275 (1%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
VLK K G+ N + GL+ + A E+ + +V ++ LN +I ++
Sbjct: 209 VLKSK---GLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALC 265
Query: 343 SIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ F + M EKG P + T + L C++ +E E+ +S +
Sbjct: 266 KNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVF 325
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN +++ LC +G+ A GV+ EM + G+ PD + YN L+ CCR D + A++++D+M
Sbjct: 326 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 385
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ G +L +++ LI S+ G ++ AL+ F +M G+APD YT L+ G C+ +
Sbjct: 386 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 445
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
A +V ++ + +L +T + LC+ ++
Sbjct: 446 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKML 480
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/282 (18%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++IL L + ++ D + ++ + D + +I + N KA ++F E
Sbjct: 465 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF-E 523
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ ++ P++ N+L+ ++ +++++M R + + I +G+ I +C
Sbjct: 524 MMIQ-RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNM 582
Query: 203 AKLGQVLSMLDEVRKRE--------NSMING-------------------------SVIA 229
+ + + DE+ ++ N+++ G +
Sbjct: 583 GCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITY 642
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+I+GF K + ++ AF +++++ PD I Y ++ F G + E E+++ K +
Sbjct: 643 NTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE 702
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
GV P + Y I G + + + EA + + ++ F DD
Sbjct: 703 RGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 744
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 218/507 (42%), Gaps = 16/507 (3%)
Query: 30 WTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHS 89
W P E L L LR SL PSLV V+ +AL FF WA +Q ++H PL Y++
Sbjct: 146 WNPNFEGRLRHL-LR-SLKPSLVCAVLRSQ--ADERVALNFFYWADRQWRYSHHPLVYYT 201
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
+L LS ++ VL+ + I L + ++ S + + A V ++
Sbjct: 202 LLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAG 261
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ ICN+ + VL ++ AL+ + M G++ + + I +C+ L ++
Sbjct: 262 VEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCD---LNRIE 318
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGF-CKGKRVEEAFKVLDELRIRECK--PDFIAYRI 266
L+ + + ++ + GF CK K++E+ K L E +++ PD + Y
Sbjct: 319 DALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQV-KCLMEKMVQDSNLIPDQVTYNT 377
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ G + LK+ G Y + + R+ EAK L + S
Sbjct: 378 LIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRS 437
Query: 327 FTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
D A++ + ID A M + G P + + L LC KS E
Sbjct: 438 CNPDVVTYTAIVDGFCRLGRID--EAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLE 495
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
E+ V + + + +Y V++ G+L EA + +EM KG P N L++
Sbjct: 496 AREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQ 555
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+ C+ + AKK ++ GC+ N+ + +I F ++G++E AL + +M P
Sbjct: 556 SLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHP 615
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNK 530
DA TYT+L + L ++ L A E+ K
Sbjct: 616 DAVTYTALFDALGKKGRLDEAAELIVK 642
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 173/404 (42%), Gaps = 10/404 (2%)
Query: 154 PEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG---QVLS 210
P + +LL VL+ A ++ M+ RG+E S FG + + KL +VL+
Sbjct: 196 PLVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLT 255
Query: 211 MLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
++ + N I + I VL+ KG ++E+A + L+ +++ KPD + Y + +
Sbjct: 256 LMQKAGVEPNLSICNTTIYVLV-----KGCKLEKALRFLERMQVTGIKPDIVTYNSLIKG 310
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
+ + + + ++ G P Y + L E++I + K L E +V I
Sbjct: 311 YCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIP 370
Query: 331 DDV-LNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
D V N LI +S A+ F +KG S + + C++ + DE +
Sbjct: 371 DQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLV 430
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+ + D+ +Y +V C GR+ EA ++Q+M + G P+ Y +L+ C
Sbjct: 431 IDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHS 490
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
A+++ + + N TY +++ F G++ A L M+EKG P
Sbjct: 491 GKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEI 550
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L++ LCQ + A + + +N + +T + C+
Sbjct: 551 NLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQ 594
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 169/397 (42%), Gaps = 11/397 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ +L+ G+ D+AL E +G +G+ + FC+ ++ + S++ ++
Sbjct: 376 NTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYS 435
Query: 218 RENSMINGSVIA-VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
R N V+ I+ GFC+ R++EA K+L ++ CKP+ ++Y + G
Sbjct: 436 RS---CNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGK 492
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
E ++ + P Y + G E ++ EA +L +V F +N
Sbjct: 493 SLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINL 552
Query: 337 LIGSVSSIDPR-SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI S+ A + + KG + + + C+ + + V + + ++
Sbjct: 553 LIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSN 612
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D +Y + L GRL EA +I +M KGLDP + S++ C+ +
Sbjct: 613 KHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDML 672
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L D+M + YN +I K + G +E A +L +L DA T L+E
Sbjct: 673 NLLDRMVKRKPFRTI--YNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESC 730
Query: 516 CQETNLQAAFEV----FNKSVNHDVMLARSILSTFMI 548
++ +A++V F +++ D+ L + ++
Sbjct: 731 LKKGVALSAYKVACQMFRRNLTPDLKLCEKVTKKLVL 767
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 37/185 (20%)
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
VMVS+ +G+LR A V+ M++ G++P++S N+ + + L A + ++M +
Sbjct: 237 VMVSY-SRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVT 295
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG------------------------ 500
G ++ TYN LI + ++ IE AL L + KG
Sbjct: 296 GIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQV 355
Query: 501 ------------VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
+ PD TY +L+ L + + A ++ + + + S +
Sbjct: 356 KCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVH 415
Query: 549 SLCRR 553
S C++
Sbjct: 416 SFCQK 420
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/519 (22%), Positives = 212/519 (40%), Gaps = 48/519 (9%)
Query: 42 GLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQIN 101
G +++P + RV+ + +A FF WA +P F H+ + +L + +++
Sbjct: 36 GYASTVTPEVAGRVLQQ--VEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHE 93
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLL 161
+LK+ + P NE+ + +++
Sbjct: 94 EAHRLLKE----------ELEPLCFP---------------NEIMYT----------TVI 118
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
G +D A ++ DEM RGV+ + I C ++ + L K
Sbjct: 119 NGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQF----KSMGE 174
Query: 222 MINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIR-----ECKPDFIAYRIVAEEFKLMG 275
+ +VI +++G CK R++EA ++ D++ R C+PD I+Y V +
Sbjct: 175 ECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQ 234
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
V + K+ R +G AP Y I GL R E EL + F I+ N
Sbjct: 235 RVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFN 294
Query: 336 ALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
A++ ++ D + A FF +++ G+ P + T + LCK + DE + + +
Sbjct: 295 AMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVES 354
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D+ +Y+ ++ C +GR+ +A V M P + +L+ R A
Sbjct: 355 KVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREA 414
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++ + M +G L+TYN+L+ +E AL ++H M K PD TY L++
Sbjct: 415 FRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQC 474
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
LC+ + A E + +V+ +I + LC++
Sbjct: 475 LCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQ 513
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 197/458 (43%), Gaps = 23/458 (5%)
Query: 85 LSYHSILKSLSLSRQINA----IDSVLKQVKVNK-ITLDSSVYRFIIPSLIQGKNTQKAF 139
++Y++++ L + +I+ D + K+ + + D Y +I +L + + KA+
Sbjct: 181 ITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAY 240
Query: 140 SVFNEVK-FNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
F ++ C P + +SL+ L L++ M +G + I F +
Sbjct: 241 EYFKRMRAVGC---APNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAML 297
Query: 197 ---WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
WK E K Q L + K+ N V + +HG CK RV+EA+++L E+
Sbjct: 298 HALWKNDEQEKACQFFERLLKSGKKPNV-----VTYNVAVHGLCKAGRVDEAYRILLEMV 352
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+ PD I Y + + F G + + + V + P + + G ++
Sbjct: 353 ESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSR 412
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLS 372
EA + E +V+ F N L+ V D SA+ ++ M K R P +T + L
Sbjct: 413 EAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLI 472
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
+ LC+ + DE E V+ A++ + + +V LC G + EA V+ + G
Sbjct: 473 QCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQ 532
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P + L+E A KL + + G + TY++ +++ + G+ + A+ +
Sbjct: 533 PLGETFKILVEELYLRKKWEAASKL---LRSPGFVADAATYSLCVAEICKAGKPDEAVEV 589
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
M+ KGV PD TY ++L LC +++A F K
Sbjct: 590 IEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEK 627
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 157/351 (44%), Gaps = 10/351 (2%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L G +D A ++ EM V I + I FC+ ++ + + R + I
Sbjct: 335 LCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVF--TRMMVHECI 392
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
V + ++HGF + K+ EAF+V +++ P Y ++ + SV +
Sbjct: 393 PHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEI 452
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-- 341
K ++ P N Y I L RR+ EAKE +V+ + + + +AL+ +
Sbjct: 453 YHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCK 512
Query: 342 -SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+D A + ++E G P T L + L R K + K+L + + D
Sbjct: 513 QGEVD--EACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEA---ASKLLRSPGFVADA 567
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+Y++ V+ +C +G+ EA VI++M KG+ PD Y +++ + C D + A +++
Sbjct: 568 ATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEK 627
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
M + GC+ L TY +LI + + A R+F M+ G P A T +L
Sbjct: 628 MASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTL 678
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 143/335 (42%), Gaps = 6/335 (1%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
T ++Y SI+ + +++ D V ++ V++ + ++ + K +++AF
Sbjct: 357 TPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFR 416
Query: 141 VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
V ++ G + N L+ + +++AL+++ +M + + + I C
Sbjct: 417 VHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLC 476
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
++ + LD V + +N + NG++ L+ CK V+EA VLD + C+P
Sbjct: 477 RARRVDEAKEFLD-VMEADNVVPNGAICHALV-EVLCKQGEVDEACSVLDNVVEVGCQPL 534
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
++I+ EE L + E K R G Y + + + EA E+ E
Sbjct: 535 GETFKILVEELYLRK---KWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIE 591
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+V D+ A++ S+ +D SAI F M +G P L T + L C +
Sbjct: 592 QMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSAD 651
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
+DE +++ + A + ++ + S L +G
Sbjct: 652 MADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 686
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 202/448 (45%), Gaps = 11/448 (2%)
Query: 88 HSI-LKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
H++ LKS L+ + + +L+ + + Y ++ L + A +F+E+
Sbjct: 144 HTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEML 203
Query: 147 FNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
D+ P++ N++L L G + + + ++ RG+ + ++I CE+ +
Sbjct: 204 G--RDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGR 261
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
L + +++++ R + + V+ ++ G CK +V+EA + L + + C PD
Sbjct: 262 LEEAVALVE----RMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFT 317
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + + G + E +LK G P Y I GL E I A EL
Sbjct: 318 YNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQ 377
Query: 324 SGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+ D V N+L+ G A+ N M+E+G P + T + + LCK
Sbjct: 378 AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNIS 437
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
+ V Y D+ ++N ++ C +L A +++ M G+ PDV YNS++
Sbjct: 438 DAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVL 497
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
C+ + + +++M GC N TYNILI F ++ ++E A + M + G+
Sbjct: 498 NGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLV 557
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNK 530
PDA ++ +L+ G C+ +L A+ +F K
Sbjct: 558 PDAVSFNTLIHGFCRNGDLDGAYLLFQK 585
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 172/379 (45%), Gaps = 9/379 (2%)
Query: 152 IGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ P++ N+L+ L D + A + M ++G + I +C++ L +
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEAT 335
Query: 210 SML-DEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVA 268
+L D V K + V +I+G C +E A ++ +E + ++ KPD + Y +
Sbjct: 336 ELLKDAVFK---GFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLV 392
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE-LGEVIVSGKF 327
+ G + V+ + + G P Y I GL I +A + + IV G +
Sbjct: 393 KGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKG-Y 451
Query: 328 TIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
D N LI G + SA+ M G P + T +++ LCK K+ E+ E
Sbjct: 452 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNE 511
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
++ + + +YN+++ C +L EA GVI M + GL PD +N+L+ C
Sbjct: 512 TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFC 571
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
R L A L+ ++ G S T+NILI +S ++ A ++F M+ KG PD
Sbjct: 572 RNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLY 631
Query: 507 TYTSLLEGLCQETNLQAAF 525
TY L++GLC+ N+ A+
Sbjct: 632 TYRILVDGLCKAANVDRAY 650
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 210/479 (43%), Gaps = 25/479 (5%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDS--SVYRFIIPSLIQGKNTQKAFSVFN 143
+Y ++++ L + +++ +D+ L + + + DS +Y I + + + A F
Sbjct: 37 AYRALIRELVSAGRLDDVDAALASAR-SHLAPDSLQPLYVASIQAYARAGRLRAAVDAFE 95
Query: 144 EVK-FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ F C P N+++ L + Y D A K++ M GV V + FC
Sbjct: 96 RMDLFACPPAAPAY-NAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLT 154
Query: 203 AKLGQVLSMLDEVRKR---ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ L +L + +R +V+ L HG R + DE+ R+ P
Sbjct: 155 GRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNAR-----HLFDEMLGRDVFP 209
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D + V G V E +L K K G++ +I GL + R+ EA L
Sbjct: 210 DVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALV 269
Query: 320 EVIVSGKFTIDDDV-LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
E + G + D V N L+ G + A + M+ +G +P T + + CK
Sbjct: 270 ERM--GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCK 327
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
E E+ K + D +Y +++ LC G + A + E + K L PD+
Sbjct: 328 SGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVV 387
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
YNSL++ CR+ L+ A ++ ++M GC ++ TYNI+I+ ++G I A + ++ +
Sbjct: 388 YNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAI 447
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK----SVNHDVMLARSILSTFMISLCR 552
KG PD T+ +L++G C+ L +A ++ + + DV+ S+L+ LC+
Sbjct: 448 VKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLN----GLCK 502
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 196/468 (41%), Gaps = 4/468 (0%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y++I+ +L + + V ++ + D+ + + S A + +
Sbjct: 108 AYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSL 167
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
D P +++ L + G+ NA +FDEM R V F + C+ +
Sbjct: 168 SERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDV 227
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ ++L +V KR M + I G C+ R+EEA +++ + PD + Y
Sbjct: 228 MESGALLAKVLKR--GMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYN 284
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ V E L + G P Y I G + EA EL + V
Sbjct: 285 TLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFK 344
Query: 326 KFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
F D +LI G + D A+ FN K P L ++L K LC++
Sbjct: 345 GFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHA 404
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
++V + D+ +YN++++ LC G + +A V+ + KG PDV +N+L++
Sbjct: 405 LQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDG 464
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C+ L A +L ++M+ G + ++ TYN +++ + G+ + F M+ KG P+
Sbjct: 465 YCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPN 524
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A TY L+E C+ L+ A V + ++ +T + CR
Sbjct: 525 AITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCR 572
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 149/333 (44%), Gaps = 18/333 (5%)
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I + + R+ A + + + C P AY + + + V + GV
Sbjct: 78 IQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGV 137
Query: 293 AP--RTNDYR--EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS 348
AP RT+ R F L + + L E K V+ L + R
Sbjct: 138 APDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARH 197
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE----LVEVYK-VLSANDYFTDMESY 403
F+ M+ + P ++T +N+ LC++ E L +V K +SAN + +
Sbjct: 198 ---LFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKF-----TC 249
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N+ + LC GRL EA +++ M + PDV YN+LM C++ ++ A + +M
Sbjct: 250 NIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMN 308
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
GC + TYN +I + + G ++ A L + + KG PD TY SL+ GLC E +++
Sbjct: 309 QGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIER 368
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
A E+FN++ D+ + ++ + LCR+ LI
Sbjct: 369 ALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLI 401
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 166/394 (42%), Gaps = 11/394 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++ G + A ++ + +G + + I C + + L + +E +
Sbjct: 319 NTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQA 378
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ + V+ ++ G C+ + A +V++E+ C PD Y I+ MG++
Sbjct: 379 KD--LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNI 436
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID----DDV 333
+ VV+ G P + I G ++ A +L E + + D + V
Sbjct: 437 SDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSV 496
Query: 334 LNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
LN L + + + F MI KG P T + L +N CK N+ +E V +
Sbjct: 497 LNGLCKAGKAKEVNET---FEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQ 553
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ D S+N ++ C +G L AY + Q++ KG +N L+ A + ++
Sbjct: 554 DGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQM 613
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A+K++ +M + G +L TY IL+ + ++ A M+ KG P T+ +L
Sbjct: 614 AEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLN 673
Query: 514 GLCQETNLQAAFEVFNKSVNHDVM--LARSILST 545
L + A + + V V+ + +ILST
Sbjct: 674 LLAMNHRVSEAVAIIHIMVRMGVVPEVVDTILST 707
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 151/361 (41%), Gaps = 9/361 (2%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F ++Y S++ L I + + + + D VY ++ L + A
Sbjct: 345 GFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHA 404
Query: 139 FSVFNE-VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
V NE V+ C P+I N ++ L G I +A + ++ +G F
Sbjct: 405 LQVMNEMVEEGCH---PDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTL 461
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
I +C+ KL L +++ R + + +++G CK + +E + +E+ ++
Sbjct: 462 IDGYCKRLKLDSALQLVE--RMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILK 519
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
C+P+ I Y I+ E F + + E V+ + + G+ P + I G + A
Sbjct: 520 GCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGA 579
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSS-IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
L + + ++ D N LIG+ SS ++ + A F MI KG P L T L
Sbjct: 580 YLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDG 639
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK D + + + M ++ M++ L + R+ EA +I M R G+ P+
Sbjct: 640 LCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPE 699
Query: 435 V 435
V
Sbjct: 700 V 700
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 122/506 (24%), Positives = 231/506 (45%), Gaps = 35/506 (6%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
S + F WAS+QPNF S + +L L + + +A+ +LK++K++ +D+
Sbjct: 70 SAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDND---- 125
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--------NSLLAVLASDGYIDNALKM 176
SL+ + +F ++NE+ + + E N LL VL DG N LK+
Sbjct: 126 ---SLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLV-DG---NKLKL 178
Query: 177 FD----EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
+ M RG+ F + I C ++ + +++E+ + ++ I
Sbjct: 179 VEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEME--DFGLLPDEKTFTTI 236
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV-----FEREVVLKKK 287
+ GF + ++ A +V +++ C + ++ F G + F E+ L++
Sbjct: 237 MQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLRE- 295
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DP 346
G P + + GL + A E+ ++++ F D N+LI + + +
Sbjct: 296 ---GFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEV 352
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A+ N MIE+ P T + + LCK N+ +E ++ VL+ D+ +YN +
Sbjct: 353 DEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSL 412
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC S A + +EMK KG PD YN L+++ C L+ A L +M SGC
Sbjct: 413 IQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGC 472
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ N+ TYN LI F + I A +F M +GV+ ++ TY +L++GLC+ ++ A +
Sbjct: 473 ARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQ 532
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+ ++ + + + ++ + C+
Sbjct: 533 LMDQMIMEGLRPDKFTYNSLLTYFCK 558
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 190/412 (46%), Gaps = 10/412 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG----PEICNSLLAVLASDGYIDNA 173
D S + +I +L + + A + E+ ED G + +++ +G +D A
Sbjct: 194 DVSTFNILIKALCRAHQIRPAILLMEEM----EDFGLLPDEKTFTTIMQGFIEEGNLDGA 249
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLII 233
+++ ++M G + + V + FC+ ++ + L ++E+ RE + +L+
Sbjct: 250 MRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLV- 308
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
+G K V+ A +V+D + PD Y + +G V E VL + + +
Sbjct: 309 NGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCS 368
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVF 352
P T Y I L E ++ EA +L V+ D N+LI G S + A+
Sbjct: 369 PNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMEL 428
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
+ M KG P T + L +LC R K E + + K + + ++ +YN ++ C
Sbjct: 429 YKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCK 488
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
+ R+ EA + +M+ +G+ + YN+L++ C+ + + A +L DQM G + T
Sbjct: 489 NKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFT 548
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
YN L++ F + G+I+ A + M G PD TY +L+ GLC+ ++AA
Sbjct: 549 YNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAA 600
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 166/376 (44%), Gaps = 18/376 (4%)
Query: 150 EDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC------E 201
E P+I NSL++ L G +D A+K+ ++M R +T+ + I C E
Sbjct: 330 EGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEE 389
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
KL VL+ ++ +I G C + A ++ E++ + C PD
Sbjct: 390 ATKLALVLT--------GKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDE 441
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
Y ++ + G + E +LK+ G A Y I G +RI EA+E+ +
Sbjct: 442 FTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQ 501
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ + + N LI G S A + MI +G P T ++L CK
Sbjct: 502 MELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGD 561
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+ ++ + ++++ D+ +Y +++ LC +GR+ A +++ ++ KG++ YN
Sbjct: 562 IKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNP 621
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE-VGEIEGALRLFHNMLEK 499
+++A R + A +L+ +M + + TY I+ + G I A+ MLE+
Sbjct: 622 VIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLER 681
Query: 500 GVAPDATTYTSLLEGL 515
G P+ +++ L EGL
Sbjct: 682 GYVPEFSSFYMLAEGL 697
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 220/493 (44%), Gaps = 21/493 (4%)
Query: 64 HSLALGFFNWASQQPNFT--HSPLSYHSILK-SLSLSRQINAIDSVLKQVKVNKITL--- 117
+L L F NWA+ FT ++ H + K L + QI A D K + +L
Sbjct: 62 QALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFK 121
Query: 118 -----------DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLL-AVLA 165
SSV+ ++ S + KA S+ + + + G N++L A +
Sbjct: 122 SLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIR 181
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMING 225
S I A +F EM V + + + I FC + L++ D++ + +
Sbjct: 182 SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETK--GCLPN 239
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
V +I G+CK +++++ FK+L + ++ +P+ I+Y +V G + E VL
Sbjct: 240 VVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLT 299
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI- 344
+ + G + Y I G E +A + ++ T +LI S+
Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 359
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
+ A+ F + M +G P T + L ++ +E V + ++ N + + +YN
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
+++ C +G++ +A V+++MK KGL PDV Y++++ CR + A ++ +M
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G + TY+ LI F E + A L+ ML G+ PD TYT+L+ C E +L+ A
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 525 FEVFNKSVNHDVM 537
++ N+ V V+
Sbjct: 540 LQLHNEMVEKGVL 552
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/521 (23%), Positives = 225/521 (43%), Gaps = 64/521 (12%)
Query: 75 SQQPNFTHSPLSYHSILKSLSLS-RQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
+Q F LSY+++L + S R I+ ++V K++ ++++ + Y +I
Sbjct: 160 AQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAG 219
Query: 134 NTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGY-----IDNALKMFDEMSHRGVE 186
N A ++F+ K + P + N+L+ DGY ID+ K+ M+ +G+E
Sbjct: 220 NIDVALTLFD--KMETKGCLPNVVTYNTLI-----DGYCKLRKIDDGFKLLRSMALKGLE 272
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE--------NSMING------------- 225
+ I + V I C ++ +V +L E+ +R N++I G
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 226 -----------SVIAVL-IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
SVI +IH CK + A + LD++R+R P+ Y + + F
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD-D 332
G + E VL++ G +P Y I G V ++ +A + E + + D
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
L G S D A+ M+EKG P T S+L + C++ ++ E ++Y+ +
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D +Y +++ C G L +A + EM KG+ PDV Y+ L+ ++ R
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEV---------------GEIEGALRLFHNML 497
AK+L ++F + TY+ LI S + G + A ++F +ML
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESML 632
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
K PD T Y ++ G C+ +++ A+ ++ + V +L
Sbjct: 633 GKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLL 673
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 76/151 (50%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN+++ C +G + A + +M+ KG P+V YN+L++ C+ + KL M
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G NL +YN++I+ G ++ + M +G + D TY +L++G C+E N
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A + + + H + + ++ + S+C+
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCK 357
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/490 (22%), Positives = 219/490 (44%), Gaps = 15/490 (3%)
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
F +Q ++ LS++S+++S + S +++ VL Q+K + + + +
Sbjct: 48 FKSGTQMGSYKLGDLSFYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKAYG 107
Query: 131 QGKNTQKAFSVFNEV--KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM---SHRGV 185
+ +KA +F+ + +F C+ NS+L V+ +G + AL+ ++ + +
Sbjct: 108 KAHLPEKAVDLFHRMWGEFQCKQTVKSF-NSVLNVIVQEGLFNRALEFYNHVVASKSLNI 166
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
+ + F + I C + + + + E+ R + N + ++HG CK +R++EA
Sbjct: 167 HPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYST--LMHGLCKEERIDEA 224
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
+LDE+++ P+ +A+ ++ G + ++ G P Y + G
Sbjct: 225 VSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHG 284
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPT 364
L ++ ++ +A L +VS K +D LI G V + +G
Sbjct: 285 LCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGN 344
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
S+L LCK K ++ +E++K + + Y+ ++ LC G+L EA G +
Sbjct: 345 EYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLS 404
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
EMK KG P+ Y+SLM A +W +M + C N Y+ILI+ + G
Sbjct: 405 EMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDG 464
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS------VNHDVML 538
+ AL ++ ML +G+ D Y+S++ G C ++ ++FN+ V DV+
Sbjct: 465 KFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVIT 524
Query: 539 ARSILSTFMI 548
+L+ F I
Sbjct: 525 YNILLNAFCI 534
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 190/412 (46%), Gaps = 11/412 (2%)
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF-NCEDIGPE--ICNSLLAVLASDGYID 171
I ++ + +I ++ + KA VF E+ NC P+ ++L+ L + ID
Sbjct: 166 IHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNC---APDNYTYSTLMHGLCKEERID 222
Query: 172 NALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL 231
A+ + DEM G + + F V I C+ LG+ ++D + + + V
Sbjct: 223 EAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLK--GCVPNEVTYNA 280
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
++HG C ++E+A +L+++ +C P+ + + + F + G + VL G
Sbjct: 281 LVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARG 340
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAI 350
Y I GL E + +A EL + +V + V +ALI G A
Sbjct: 341 HRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEAR 400
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
F + M KG +P T S+L + + S + + V+K ++ N+ + Y+++++ L
Sbjct: 401 GFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGL 460
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG--CSG 468
C G+ EA V ++M +G+ DV Y+S++ C +L+ KL++QM G
Sbjct: 461 CKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQP 520
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
++ TYNIL++ F I A+ + + ML++G PD T L+ L + N
Sbjct: 521 DVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMN 572
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F + + P T S L LCK + DE V + + F ++ ++NV++S
Sbjct: 189 AIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLIS 248
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G L A ++ M KG P+ YN+L+ C + L A L +QM ++ C
Sbjct: 249 ALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVP 308
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N T+ LI+ F G R+ ++ +G + Y+SL+ GLC+E A E++
Sbjct: 309 NDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELW 368
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
+ V + S + LCR
Sbjct: 369 KEMVGKGCGPNTIVYSALIDGLCR 392
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 201/462 (43%), Gaps = 28/462 (6%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+P+ +P S S L SL+ +I ++L V + + + F+ SL G
Sbjct: 71 EPSHAFTPASLAS-LHSLAARHRIPPPSALLLSKLVRRFSSPAEAAGFLRDSLASGAPAP 129
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
S+FN SLL L G + ++F M V+ + +G+ +
Sbjct: 130 D-ISIFN---------------SLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILL 173
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C++ +G L +LD + + + I ++ G CK R+++A +DE R+R
Sbjct: 174 NGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDE-RMRH 232
Query: 257 ---CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
C P+ + Y +A+ F +G + ++ + K GVAP I GL R+
Sbjct: 233 VHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVG 292
Query: 314 EA----KELGEVIVSGKF-TIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTL 368
A +E V + + L + +++D A+ F+ M + G P
Sbjct: 293 AALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVD--MAMELFHEMADHGHRPDAVMY 350
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ L + + + + + D ++YN+++ C +L EAY +++EMK
Sbjct: 351 FTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKG 410
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
GL PDV YN+L+ C+ +L M GC ++ T+ L+ + + G+ +
Sbjct: 411 VGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDE 470
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
ALR+F +M E + P+ Y +L++ LC+ + A ++F++
Sbjct: 471 ALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDE 512
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 107/511 (20%), Positives = 191/511 (37%), Gaps = 57/511 (11%)
Query: 26 PARKWTPLLEQTLHQLGLRDSLSPS-------LVARVINPYLLTHHSLALGFF--NWASQ 76
P+ +TP +LH L R + P LV R +P + A GF + AS
Sbjct: 72 PSHAFTPASLASLHSLAARHRIPPPSALLLSKLVRRFSSP------AEAAGFLRDSLASG 125
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
P S ++S+L +L + + + + ++ + D Y ++ L + +
Sbjct: 126 APAPDIS--IFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVG 183
Query: 137 KAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDE--------------- 179
A V + + D+ P+I N+++ L G + A+ DE
Sbjct: 184 DALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTY 243
Query: 180 ----------------------MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
M GV + I I C ++G L E R
Sbjct: 244 NCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRT 303
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+V + F V+ A ++ E+ +PD + Y + G +
Sbjct: 304 VWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRL 363
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ +K G Y I G ++++ EA EL E + D N L
Sbjct: 364 LDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTL 423
Query: 338 IGSVSSIDPRSAI-VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ + SA+ MI+ G P++ T L CK K+DE + +++ +
Sbjct: 424 LSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARI 483
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ YN ++ FLC S + A + EM+ K + +V+ YN+L++ + + A +
Sbjct: 484 QPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFE 543
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
L D+M C+ N T ++L+ E+GE E
Sbjct: 544 LMDRMREERCTPNYVTVDVLMEWLPEIGETE 574
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 231/498 (46%), Gaps = 21/498 (4%)
Query: 62 THHSLALGFFNWASQQPN-----FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKV-NKI 115
THHSL F S + + LS++S++++ S S +++ +L Q+K N++
Sbjct: 38 THHSLPPQIFKSPSNTSSHKWGSYKLGDLSFYSLIENFSNSLDFTSLEQLLHQMKCENRV 97
Query: 116 TLDSSVYRFIIPSLIQGKN--TQKAFSVFNEV--KFNCEDIGPEICNSLLAVLASDGYID 171
++ S FII GK QKA +F+ + +F+C+ N++L V+ +G D
Sbjct: 98 FIEKS---FIIMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSF-NTVLNVVIQEGCFD 153
Query: 172 NALKMF----DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
AL+ + D S ++ + + F + I C + Q + + + R N + +G
Sbjct: 154 LALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDR-NCVADGYT 212
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+ L+ HG C R++EA +LDE+++ P+ +A+ ++ G + ++
Sbjct: 213 YSTLM-HGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNM 271
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDP 346
G P Y + GL ++ ++ +A L +V+ K +D L+ G V
Sbjct: 272 FLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRA 331
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+ + EKG + S+L L K K + ++++K + + Y+ +
Sbjct: 332 LDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSAL 391
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC G+ EA + EMK KG P+ Y+SLM + A +W +M + C
Sbjct: 392 IDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDC 451
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ + Y+ILI+ + G+++ AL ++ ML +G+ D Y+S++ G C ++ +
Sbjct: 452 NHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMK 511
Query: 527 VFNKSVNHDVMLARSILS 544
+FN+ + H+ L +++
Sbjct: 512 LFNQMLCHNPKLQPDVVT 529
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 180/398 (45%), Gaps = 7/398 (1%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVK-FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
+ +I +L + N +A VF + NC G ++L+ L ++G ID A+ + DEM
Sbjct: 178 FNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTY-STLMHGLCNEGRIDEAVSLLDEM 236
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
G + + F V I C+ L + ++D + + + V ++HG C
Sbjct: 237 QVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLK--GCVPNEVTYNSLVHGLCLKG 294
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
++++A +L+ + +C P+ I + + + F G + VL + G Y
Sbjct: 295 KLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYS 354
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK 359
I GL E + +L + +V + V +ALI G P A + M K
Sbjct: 355 SLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNK 414
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P T S+L + + + V+K ++ ND Y+++++ LC +G+L+EA
Sbjct: 415 GHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEA 474
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG--CSGNLKTYNILI 477
V ++M +G+ DV Y+S++ C L+ KL++QM ++ TYNIL+
Sbjct: 475 LIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILL 534
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ F + A+ + + ML++G PD T L+ L
Sbjct: 535 NAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL 572
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 139/329 (42%), Gaps = 4/329 (1%)
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
+V+ V+I G C +E V+D +P+ +++ +V + +G+V + V +
Sbjct: 141 TVLNVVIQEG-CFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFR 199
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSI 344
Y + GL E RI EA L E+ V G F + N LI ++
Sbjct: 200 GMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFP-NPVAFNVLISALCKK 258
Query: 345 -DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
D A + M KG VP T ++L LC + K D+ + + + AN + ++
Sbjct: 259 GDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITF 318
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+V GR + V+ ++ KG + Y+SL+ +E +LW +M
Sbjct: 319 GTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVE 378
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
GC N Y+ LI G+ + A M KG P++ TY+SL+ G + ++
Sbjct: 379 KGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHK 438
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCR 552
A V+ + ++D S + LC+
Sbjct: 439 AILVWKEMTDNDCNHHEVCYSILINGLCK 467
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 2/213 (0%)
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
V ++D A+ F M ++ V T S L LC + DE V + + F +
Sbjct: 188 VGNVD--QAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNP 245
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
++NV++S LC G L A ++ M KG P+ YNSL+ C + L A L ++
Sbjct: 246 VAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNR 305
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M A+ C N T+ L+ F + G +R+ ++ EKG + +Y+SL+ GL +E
Sbjct: 306 MVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGK 365
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ +++ + V + S + LCR
Sbjct: 366 GEHGMQLWKEMVEKGCKPNTIVYSALIDGLCRE 398
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 95/218 (43%), Gaps = 13/218 (5%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y +++ L + + L ++K T +S Y ++ + + KA V+ E+
Sbjct: 388 YSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMT 447
Query: 147 FN-CEDIGPEICNSLLA-VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
N C E+C S+L L +G + AL ++ +M RG++ + + I FC
Sbjct: 448 DNDCNH--HEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQL 505
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ Q + + +++ + V ++++ FC V A +L+ + + C PDFI
Sbjct: 506 VEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITC 565
Query: 265 RIVAEEFK------LMGSVFEREVV---LKKKRKLGVA 293
I + + G F E+V +K++R +G +
Sbjct: 566 DIFLKTLRDNMDPPQDGREFLDELVVRLIKRQRTVGAS 603
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 204/482 (42%), Gaps = 46/482 (9%)
Query: 88 HSILKSLSLSRQI--NAIDSVLKQVK-VNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
HS L S +Q+ +A+D +L Q++ + I D+ VY ++ L++G + SV++E
Sbjct: 113 HSFLDSYE-GQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSE 171
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ I P++ N+L+ L + A+ M +EMS RGV F + F E
Sbjct: 172 M--GARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEE 229
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF---------------- 246
+ L + + R E V ++I+G+CK RVE+A
Sbjct: 230 GSIEAALRV--KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 287
Query: 247 -------------------KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
KV+D + PD Y IV G + E + +L +
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DP 346
G P + I L R+ EA +L + + D N LI ++ + DP
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 407
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A+ F M G P T + L NLC K + +++ K + + +YN +
Sbjct: 408 HLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 467
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC R+ EA V +M +G+ + +N+L++ C++ + A L +QM + G
Sbjct: 468 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGL 527
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
N TYN +++ + + G+I+ A + M G D TY +L+ GLC+ Q A +
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 587
Query: 527 VF 528
V
Sbjct: 588 VL 589
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/494 (21%), Positives = 209/494 (42%), Gaps = 50/494 (10%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF-I 125
AL N A + +F P Y I++ L + A+D L +V V ++ + + +
Sbjct: 57 ALRMLNAALARDDFAPGPEVYEEIIRKLG---AVGALD--LMKVLVAEMRREGHQVKLGV 111
Query: 126 IPSLIQGKNTQKAFS-----VFNEVK--FNCEDIGPEICNSLLAVLASDGYIDNALKMFD 178
+ S + Q+ F + N+++ F + + N LL VL + ++
Sbjct: 112 VHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQ-ADTVVYNHLLNVLVEGSKMKLLESVYS 170
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
EM RG++ + F + C ++ + ML+E+ R + ++ GF +
Sbjct: 171 EMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSR--GVAPDETTFTTLMQGFVE 228
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+E A +V + C + ++ + +G V + ++++ G P
Sbjct: 229 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQIT 288
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIE 358
Y F+ GL C+ +G A+ + M++
Sbjct: 289 YNTFVNGL------CQNDHVGH----------------------------ALKVMDVMVQ 314
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
+G P + T + + LCK + +E + + D+ ++N +++ LCT RL E
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A + +++ KG+ PDV +N L+ A C+ A +L+++M SGC+ + TYN LI
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+G++ AL L +M G TY ++++GLC++ ++ A EVF++ +
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494
Query: 539 ARSILSTFMISLCR 552
+T + LC+
Sbjct: 495 NAITFNTLIDGLCK 508
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 190/414 (45%), Gaps = 19/414 (4%)
Query: 153 GPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS-- 210
GPE+ ++ L + G +D + EM G + + GV + F ++ + Q+
Sbjct: 73 GPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQ---VKLGV-VHSFLDSYEGQQLFDDA 128
Query: 211 ---MLDEVRK----RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+L++++ + ++++ ++ VL+ +G +++ V E+ R KPD +
Sbjct: 129 VDLILNQLQPLFGIQADTVVYNHLLNVLV-----EGSKMKLLESVYSEMGARGIKPDVVT 183
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+ + + V ++L++ GVAP + + G + E I A + ++
Sbjct: 184 FNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML 243
Query: 324 SGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+ +N LI + A+ + I G P T + LC+ +
Sbjct: 244 EMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVG 303
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
++V V+ + D+ +YN++V+ LC +G+L EA G++ +M +G PD++ +N+L+
Sbjct: 304 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI 363
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
A C + L A L Q+ G S ++ T+NILI+ +VG+ ALRLF M G
Sbjct: 364 AALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCT 423
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
PD TY +L++ LC L A ++ + + +T + LC+++ I
Sbjct: 424 PDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 477
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 177/403 (43%), Gaps = 10/403 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMF 177
D Y + L Q + A V + + D N ++ L +G ++ A +
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 344
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGF 236
++M RG F I C +L + L + +V + ++ V ++I+
Sbjct: 345 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG---VSPDVYTFNILINAL 401
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
CK A ++ +E++ C PD + Y + + +G + + +LK G T
Sbjct: 402 CKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRST 461
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRSAIVFF 353
Y I GL + RI EA+E+ + + + + N LI + ID A
Sbjct: 462 ITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKID--DAFGLI 519
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
N MI +G P T +++ + CK+ + ++ + ++AN + D+ +Y +++ LC +
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKA 579
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
GR + A V++ M+ KG+ P YN ++++ R + +R A L+ +M G + TY
Sbjct: 580 GRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTY 639
Query: 474 NILISKFSEVG-EIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
I+ G I+ A M++KG P+ +++ L EGL
Sbjct: 640 KIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682
>gi|414590862|tpg|DAA41433.1| TPA: hypothetical protein ZEAMMB73_769800 [Zea mays]
Length = 1295
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 216/459 (47%), Gaps = 14/459 (3%)
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN-SLLA 162
D++L ++ I +D + F++ L++G A S+F+++K +C P +C+ S+L
Sbjct: 815 DALLTYIQAKNIGVDRRLCNFLLKCLVEGNQIMYARSLFDDMK-SCGP-SPNVCSYSILM 872
Query: 163 VLASDG---YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
+ + G ++ A ++ EM GV + +G +++ C + ++ L + +
Sbjct: 873 SMYTHGERSCLEEAFELLCEMESNGVRPNATTYGTYLYGLCRSRQVTSAWDFLQTLSQSG 932
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
N AV IHGFC +V++A +V ++ PD +Y I+ + G + +
Sbjct: 933 GPCSNYCFNAV--IHGFCCEGQVDKAIEVFHGMKKCGYVPDVHSYSILVDGLCKQGDLLK 990
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
+L++ + G+ P Y + GL ++ A ++ + + F + D +N I
Sbjct: 991 GYDMLEEMARNGICPNQVSYSSLLHGLCKTGQVALALKIFKNLQDHGF--EHDQINYSII 1048
Query: 339 --GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
G +D ++ + MI P + ++L LC+ + + V++++ N
Sbjct: 1049 LHGCCQHLDLKAISDLWFDMIHHNIAPDVYNYTSLIYALCRHRNLQDALGVFELMLENGL 1108
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK-GLDPDVSFYNSLMEACCREDLLRPAK 455
++ + ++V G + EA+ + M + G+ P++ Y ++ C+ +
Sbjct: 1109 SPNIVTCTILVDSFSKQGLVGEAFLFLDRMHQSLGIVPNLCMYRVMINGLCKTNKYSGVW 1168
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
++ M G ++ Y+I+I F + +++ ALRL+H ML++GV P+ TY+SL+ GL
Sbjct: 1169 NVFADMIKRGYVPDVVLYSIIIEGFVKALKLQEALRLYHKMLDEGVKPNIFTYSSLINGL 1228
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRV 554
C + L A + + D++L + ++ + CRR+
Sbjct: 1229 CNDDRLPEAMGLIRDMIGEDLLLDNVLYTSIIACYCRRL 1267
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 198/455 (43%), Gaps = 16/455 (3%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QP+ T +++++++ L + +I + + D Y ++ L + NT
Sbjct: 217 QPDNT----TFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTS 272
Query: 137 KAFSVFNE-VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
A + V+ NC P + N+++ L D + A +F EM +G+ +
Sbjct: 273 AAIRLLRSMVQKNCR---PNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYN 329
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDEL 252
I C + V ++L+E+ NS I +V+ ++ CK + A V+D +
Sbjct: 330 SLIHALCNLCEWKHVTTLLNEMV---NSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 386
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
R +PD + Y + + L + E V G P Y I G +R+
Sbjct: 387 IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 446
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNL 371
+A L E + D N LI + + + AI F+ M+ G++P L T L
Sbjct: 447 DKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRIL 506
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
LCK + E + + K + ++ D+ YN+ + +C +G L A + + KGL
Sbjct: 507 LDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGL 566
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
PDV YN ++ C+ LL A KL+ +M +GCS + YN +I F E GA +
Sbjct: 567 QPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQ 626
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
L ML +G + D +T T ++E L + L +FE
Sbjct: 627 LLQEMLAEGFSADVSTTTLIVEML-SDDGLDQSFE 660
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 193/451 (42%), Gaps = 7/451 (1%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S + + +L S++ + + + S+ Q+ I D +I S + AFSV
Sbjct: 149 STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVL 208
Query: 143 NEV-KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
++ K C+ N+L+ L +G I AL +FD+ G + + +G + C
Sbjct: 209 AKLLKLGCQPDNTTF-NTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLC- 266
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
K+G + + +R +VIA II CK ++V EAF + E+ + PD
Sbjct: 267 --KVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPD 324
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
Y + + +L + + P + + L E I A ++ +
Sbjct: 325 IFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVD 384
Query: 321 VIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+++ D AL+ G + A+ F+ M+ KG VP + + + L C+
Sbjct: 385 MMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQ 444
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ D+ + + + +S D +YN ++ LC GRL+ A + EM G PD+ Y
Sbjct: 445 RMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYR 504
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
L++ C+ L A L + S ++ YNI I GE+E A LF N+ K
Sbjct: 505 ILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSK 564
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
G+ PD TY ++ GLC+ L A ++F K
Sbjct: 565 GLQPDVRTYNIMIHGLCKRGLLDEANKLFRK 595
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 166/365 (45%), Gaps = 5/365 (1%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D+AL F+ M H ST+ F + + VLS+ ++ ++ I V
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQM---DSFGIPPDVYT 187
Query: 230 V-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+ ++I+ FC +R+ AF VL +L C+PD + + + G + E + K
Sbjct: 188 LNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 247
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPR 347
G P Y + GL A L +V + N +I S+
Sbjct: 248 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVT 307
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A F+ MI KG P + T ++L LC + + + + + ++ ++ +V
Sbjct: 308 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 367
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
LC G + A+ V+ M ++G++PDV Y +LM+ C + A K++D M GC
Sbjct: 368 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 427
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N+++YNILI+ + ++ ++ A+ L M +G+ D TY +L+ GLC LQ A +
Sbjct: 428 PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIAL 487
Query: 528 FNKSV 532
F++ V
Sbjct: 488 FHEMV 492
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 129/298 (43%), Gaps = 7/298 (2%)
Query: 259 PDFIAYRIVAEEF---KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
PD I+ F + +G F VL K KLG P + I GL VE +I EA
Sbjct: 183 PDVYTLNILINSFCHLRRLGYAFS---VLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEA 239
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
L + + F D L+ + + + +AI M++K P + + + +
Sbjct: 240 LHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDS 299
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK + E ++ + D+ +YN ++ LC + ++ EM + P+
Sbjct: 300 LCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPN 359
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V ++++++A C+E ++ A + D M G ++ TY L+ E++ A+++F
Sbjct: 360 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFD 419
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M+ KG P+ +Y L+ G CQ + A + + ++ +T + LC
Sbjct: 420 TMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCH 477
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 1/221 (0%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEK-GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
L+ S++ + S ++ + ++ G P + TL+ L + C + V L
Sbjct: 156 LLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLG 215
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D ++N ++ LC G++ EA + + +G PDV Y +LM C+ A
Sbjct: 216 CQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAI 275
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L M C N+ YN +I + ++ A LF M+ KG++PD TY SL+ L
Sbjct: 276 RLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHAL 335
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
C + + N+ VN +M + ST + +LC+ +I
Sbjct: 336 CNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMI 376
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 102/207 (49%), Gaps = 5/207 (2%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ FN M+ P+ + L ++ K ++ + + + D+ + N++++
Sbjct: 134 ALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILIN 193
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C RL A+ V+ ++ + G PD + +N+L+ C E + A L+D+ G
Sbjct: 194 SFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQP 253
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TY L++ +VG A+RL +M++K P+ Y ++++ LC++ + AF +F
Sbjct: 254 DVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLF 313
Query: 529 N----KSVNHDVMLARSILSTFMISLC 551
+ K ++ D+ S++ + +LC
Sbjct: 314 SEMITKGISPDIFTYNSLIHA-LCNLC 339
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 108/245 (44%), Gaps = 38/245 (15%)
Query: 327 FTIDDDV--LNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
F I DV LN LI S + A +++ G P +T + L + LC K E
Sbjct: 179 FGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGE 238
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ ++ + D+ +Y +++ LC G A +++ M +K P+V YN++++
Sbjct: 239 ALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIID 298
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI----------------- 486
+ C++ + A L+ +M G S ++ TYN LI + E
Sbjct: 299 SLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMP 358
Query: 487 --------------EGALRLFHN----MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
EG + + H+ M+++GV PD TYT+L++G C + + A +VF
Sbjct: 359 NVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVF 418
Query: 529 NKSVN 533
+ V+
Sbjct: 419 DTMVH 423
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 130/558 (23%), Positives = 237/558 (42%), Gaps = 49/558 (8%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
KW P E+ L L LR + LV V+ + ++ + FF WA+++ N+ H +Y
Sbjct: 72 KWGPDAERALEVLMLR--VDHWLVREVMKTDVGV--NVKMQFFRWAAKKRNYQHDTSTYM 127
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSV-YRFIIPSLIQGKNTQKAFSVFNEVKF 147
+++ L L Q + +++++ + I + + + +I L K KA ++F ++K
Sbjct: 128 ALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKA 187
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG-VEFSTIGFGVFIWKFCENAKLG 206
+ NS++ +L +G + ++++EMS+ G + T+ + I FC+ +
Sbjct: 188 RKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQD 247
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ +L+E+ +EN M + I +II F K V A + +E+R C+PD Y
Sbjct: 248 SAIRLLNEM--KENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTE 305
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA----KELGEVI 322
+ G + E + ++ G P T I L R+ + +E+G
Sbjct: 306 LIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSH 365
Query: 323 VSGKFTIDDDVLNALIGSV---------------SSIDP------------------RSA 349
+ ++ AL S S I P A
Sbjct: 366 CIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKA 425
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
++ M EKG P + +L L K + D E+++ L N + Y VM+
Sbjct: 426 MMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKH 485
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
L +GRL +A + EM + G P+V YN+LM R +L A +M GC +
Sbjct: 486 LGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPD 545
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ +YNI+++ ++ G A+ + NM + PDA +Y ++L L + A E+
Sbjct: 546 INSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMK 605
Query: 530 K----SVNHDVMLARSIL 543
+ +D++ SIL
Sbjct: 606 EMNALGFEYDLITYSSIL 623
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 179/427 (41%), Gaps = 22/427 (5%)
Query: 70 FFNWASQQPNFTHSPLSYHSILKSL-SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPS 128
+N S + + ++Y +++ + L RQ +AI +L ++K N + + +Y II
Sbjct: 216 LYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAI-RLLNEMKENGMQPTAKIYTMIISL 274
Query: 129 LIQGKNTQKAFSVFNEVKF-NCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGV 185
+ N A S+F E+++ C P++ L+ L G ID A + EM G
Sbjct: 275 FFKLDNVHGALSLFEEMRYMYCR---PDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGC 331
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE---NSMINGSVIAVLIIHGFCKGKRV 242
+ T+ I + +L L + +E+ N + ++I L F RV
Sbjct: 332 KPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKAL----FESKSRV 387
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
E F + ++ P Y I+ + F + + ++L++ + G P Y
Sbjct: 388 SEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSL 447
Query: 303 ILGLIVERRI---CEA-KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIE 358
I L +R CE +EL E S + ++ L G +D AI F+ M +
Sbjct: 448 IDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHL-GKAGRLD--DAINLFDEMSK 504
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
G P + + L L + DE + + + + D+ SYN++++ L +G
Sbjct: 505 LGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHR 564
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A ++ MK + PD YN+++ A + A +L +M A G +L TY+ ++
Sbjct: 565 AMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILE 624
Query: 479 KFSEVGE 485
+V +
Sbjct: 625 AIGKVDQ 631
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 176/404 (43%), Gaps = 43/404 (10%)
Query: 153 GPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS 210
GP++ N+++A G +D A + E R VE I C + L+
Sbjct: 125 GPDVMAYNAMMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGRTANALA 181
Query: 211 MLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
+LDE+ +R + V +++ CK ++A K+LDE+R + C PD + Y +V
Sbjct: 182 VLDEMLRRR--CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNG 239
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTI 329
G V + LK G P T Y + GL R +A+EL GE
Sbjct: 240 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGE--------- 290
Query: 330 DDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
M +KG P + T + L LC++ + +EV +
Sbjct: 291 --------------------------MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE 324
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+ + SYN ++ C ++ +A + M +G PD+ YN+L+ A CR
Sbjct: 325 QIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSG 384
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
+ A +L Q+ GC+ L +YN +I ++ G+ + AL L + M+ KG+ PD TY+
Sbjct: 385 EVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS 444
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
++ GLC+E ++ A F K + + + + ++ LC+R
Sbjct: 445 TIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKR 488
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 144/337 (42%), Gaps = 11/337 (3%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
T ++Y+ ++ + +++ LK + ++ Y ++ L + + A
Sbjct: 227 TPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEE 286
Query: 141 VFNEV-KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
+ E+ + C P + N L++ L G ++ AL++ +++ G +++ + +
Sbjct: 287 LMGEMGQKGCP---PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLH 343
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
FC+ K+ + ++ LD + R V ++ C+ V+ A ++L +L+ + C
Sbjct: 344 AFCKQKKMDKAMAFLDLMVSR--GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 401
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-K 316
P I+Y V + G E +L + G+ P Y GL E RI +A +
Sbjct: 402 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 461
Query: 317 ELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
G+V G + + NA+I G + SAI F +MI G +P ST + L + L
Sbjct: 462 AFGKVQDMG-IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 520
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
E ++ L + ++ + + V+FL T
Sbjct: 521 AYEGLIKEARDLLDELCSRGEEILLDVHLIDVAFLTT 557
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 124/547 (22%), Positives = 235/547 (42%), Gaps = 80/547 (14%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVN-KITLDSSVYRFIIPSLIQGKNT 135
+ F H+ +Y S+L+ L + N ++++L +++ N TL VY + +
Sbjct: 112 KQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKI 171
Query: 136 QKAFSVFNEVK-FNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
Q+A F + FNC+ P + N+++ +L GY + A K++ M + VE +
Sbjct: 172 QEAVDTFERMDLFNCD---PSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTY 228
Query: 193 GVFIWKFCENAKLGQVLSML--------------------------DEVRKRE--NSMIN 224
+ I FC + L +L D R RE + M+
Sbjct: 229 TIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLE 288
Query: 225 GSVIAVL-----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+ + ++H CK V E+ ++ D++ R P+ + I + GS+
Sbjct: 289 CCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDR 348
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
+L + G+ P Y I GL + R+ EA+E +V+G F +D N++I
Sbjct: 349 AVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIID 408
Query: 339 -----------------------------------GSVSSIDPRSAIVFFNFMIEKGRVP 363
G DP A+ F + KG P
Sbjct: 409 GYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRP 468
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
++ + L K LC++ +++ ++ D+ +YN++++ LC G L +A +I
Sbjct: 469 SIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLI 528
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+ KG PD+ YN+L++ CR+ L A +L ++M++ G + ++ TYN L++ +
Sbjct: 529 GDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKT 588
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLA 539
+ E + +F M EKG AP+ TY +++E LC + A ++ +K + DV+
Sbjct: 589 AKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSF 648
Query: 540 RSILSTF 546
++++ F
Sbjct: 649 GTLITGF 655
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 134/563 (23%), Positives = 229/563 (40%), Gaps = 82/563 (14%)
Query: 68 LGFFNWASQ------QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV 121
G+FN A + +Y +KS + + A +L+ + V ++
Sbjct: 203 FGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVA 262
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDE 179
Y ++ + + +A +F+E+ C + P++ N L+ L G++ + ++FD+
Sbjct: 263 YCTVVTGFYEFGDNDRARELFDEMLECC--LCPDVTTFNKLVHALCKKGFVLESERLFDK 320
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK---RENSMINGSVIAVL----- 231
+ RGV + F +FI C+ L + + +L V + R + + +VI L
Sbjct: 321 VLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSR 380
Query: 232 -------------------------IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
II G+CK V +A ++L + + KPD Y
Sbjct: 381 VVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCS 440
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-------- 318
+ F G + V K G+ P Y I GL + I A +L
Sbjct: 441 LVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKG 500
Query: 319 ----------------------------GEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G+ I G D N L+ G + SA
Sbjct: 501 CKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIP-DIFTYNTLVDGYCRQLKLDSA 559
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
I N M +G P + T + L LCK KS+E++E++K ++ ++ +YN ++
Sbjct: 560 IELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIES 619
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS-GCSG 468
LC S ++ EA ++ EMK KGL PDV + +L+ C+ L A L+ M S
Sbjct: 620 LCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSH 679
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
TYNI+IS FSE ++ ALRLF M + G PD TY L++G C+ N+ ++
Sbjct: 680 TTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFL 739
Query: 529 NKSVNHDVMLARSILSTFMISLC 551
+++ + + + + LC
Sbjct: 740 LENIEKGFIPSLTTFGRVLNCLC 762
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 165/378 (43%), Gaps = 4/378 (1%)
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR-ENSMINGSVIAVLIIHGFCKG 239
+ +G + + + + K + K ++ ++L E+R +N+++ G + + +G KG
Sbjct: 111 TKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGR-KG 169
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
K ++EA + + + C P +Y + G + V + + V Y
Sbjct: 170 K-IQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTY 228
Query: 300 REFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIE 358
I R A + L + V G F+ + G D A F+ M+E
Sbjct: 229 TIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLE 288
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
P ++T + L LCK+ E ++ + ++ ++N+ + LC G L
Sbjct: 289 CCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDR 348
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A ++ + R+GL PDV YN+++ CR+ + A++ +M G N TYN +I
Sbjct: 349 AVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIID 408
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+ + G + A R+ + + KG PD TY SL+ G CQ+ + A VF + +
Sbjct: 409 GYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRP 468
Query: 539 ARSILSTFMISLCRRVLI 556
+ + +T + LC++ LI
Sbjct: 469 SIIVYNTLIKGLCQQGLI 486
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/418 (19%), Positives = 155/418 (37%), Gaps = 76/418 (18%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML-DEVR 216
NS++ G + +A ++ + +G + + + FC++ Q +++ D +
Sbjct: 404 NSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLG 463
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
K I ++ +I G C+ + A ++++E+ + CKPD Y ++ MG
Sbjct: 464 KGLRPSI---IVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGC 520
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ + ++ G P Y + G + ++ A EL + S T D N
Sbjct: 521 LSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNT 580
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
L+ G + + F M EKG P + T + + ++LC K +E V++ + +
Sbjct: 581 LLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKG 640
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQ------------------------------- 424
D+ S+ +++ C G L AYG+ +
Sbjct: 641 LTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMA 700
Query: 425 -----EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
EMK+ G DPD TY +LI
Sbjct: 701 LRLFSEMKKNGCDPDNY-----------------------------------TYRVLIDG 725
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
F + G + + +EKG P TT+ +L LC E +Q A + + V D++
Sbjct: 726 FCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIV 783
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 170/366 (46%), Gaps = 13/366 (3%)
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVI 228
++D + ++ G+E + I F I FC K+G+ + + D + R S
Sbjct: 141 HVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSY- 199
Query: 229 AVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+II G C+ + E K+L+ +++ C+PD + Y + + V E + K +
Sbjct: 200 -SIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMK 258
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI------GSVS 342
G+ P Y I GL R EA L + G D + LI G VS
Sbjct: 259 GTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVS 318
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
A V M E G P ++T + L C R + E +V++V+ + D+ S
Sbjct: 319 E-----ARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFS 373
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
++++V+ C + R+ EA + EM +GL PD YN+L+ C+ A++L+ M
Sbjct: 374 FSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMH 433
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
++G NL TY+IL+ S+ G ++ A+ LF M G+ PD TY +++G+C+ +
Sbjct: 434 SNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFK 493
Query: 523 AAFEVF 528
A E+F
Sbjct: 494 DARELF 499
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 118/514 (22%), Positives = 217/514 (42%), Gaps = 74/514 (14%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL FN N S + + + +L + + S+ KQ+++ I+ D +I
Sbjct: 75 ALSAFNHMVNT-NPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILI 133
Query: 127 PSLIQGKNTQKAFSVFNEV-KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHR 183
+ + FSV ++ K E P + ++L+ +G I A+++FD M R
Sbjct: 134 NCFCRLCHVDYGFSVLGKIIKLGLE---PNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK---RENSMINGSVIAVLI-------- 232
G + + + + I C K +V+ +L+ ++ + +I +++ L
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250
Query: 233 IHGFCKGK----------------------RVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
+H FCK K R +EAF +L+E++ PD +A+ ++ +
Sbjct: 251 VHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDI 310
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
G V E V+LK ++GV P Y + G + + EA+++ EV
Sbjct: 311 MCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEV--------- 361
Query: 331 DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
MI KGR+P + + S L CK + DE +++
Sbjct: 362 -------------------------MISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDE 396
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
++ D SYN ++S LC + R EA + ++M G P++ Y+ L++ ++
Sbjct: 397 MTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGY 456
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
L A L+ M SG +L TYNI+I + G+ + A LF + KG+ P+ T
Sbjct: 457 LDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTP 516
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILS 544
++G+C+ L A + F + D A+ ++
Sbjct: 517 TIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCIN 550
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 129/271 (47%), Gaps = 1/271 (0%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
VL K KLG+ P + I G +E +I A EL +V+V+ + + + +I +
Sbjct: 148 VLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLC 207
Query: 343 SIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ + ++ M G P + + + LCK +E V ++ + +
Sbjct: 208 RVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVV 267
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y ++ L GR +EA+G++ EMK + PD+ ++ L++ C+E + A+ + M
Sbjct: 268 TYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTM 327
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G ++ TYN L++ + E+ A ++F M+ KG PD +++ L+ G C+ +
Sbjct: 328 TEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRI 387
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A ++F++ + ++ +T + LC+
Sbjct: 388 DEAKQLFDEMTHRGLIPDTVSYNTLISGLCQ 418
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
+I+ G P + T S L C K +E++ V+ A Y ++ SY++++ LC G+
Sbjct: 152 IIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGK 211
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
E +++ MK G +PDV YN++++ C++ L+ A ++ +M +G + TY
Sbjct: 212 TTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTS 271
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI +G + A L + M + PD ++ L++ +C+E + A +
Sbjct: 272 LIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMG 331
Query: 536 VMLARSILSTFMISLCRRV 554
V + +T M C R+
Sbjct: 332 VEPDVATYNTLMNGYCLRM 350
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 12/126 (9%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P + + L A R + L QM +G S ++ + ILI+ F + ++ +
Sbjct: 89 PSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSV 148
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI------LSTF 546
+++ G+ P+ T+++L+ G C E + A E+F DVM+AR S
Sbjct: 149 LGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELF------DVMVARGYKPNVHSYSII 202
Query: 547 MISLCR 552
+ LCR
Sbjct: 203 IKGLCR 208
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 188/435 (43%), Gaps = 44/435 (10%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y++++ + Q+ + VL ++K D Y +I S A +F E
Sbjct: 139 FAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEE 198
Query: 145 V-KFNCEDIGPEICNSLLAVLAS--DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ K NCE P + + + A+ DG ID A+K+ DEM +G+E T+ +
Sbjct: 199 LLKDNCE---PTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNA------- 248
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
II G CK V++AF++L L R CKPD
Sbjct: 249 ------------------------------IIRGMCKEMMVDKAFELLRSLSSRGCKPDI 278
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
I Y I+ G E E ++ + +G P + I L + ++ EA L
Sbjct: 279 ITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRS 338
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ D + LI G A F +MI G +P + + + LC+ K
Sbjct: 339 MKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGK 398
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+D+ +EV++ L ++ SYN + S L +SG A +I ++ +G+DPD YNS
Sbjct: 399 ADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNS 458
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L+ CR+ ++ A +L M + N+ +YNI++ +V A+ + M EKG
Sbjct: 459 LISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKG 518
Query: 501 VAPDATTYTSLLEGL 515
P+ TTY L+EG+
Sbjct: 519 CQPNETTYILLIEGI 533
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 164/374 (43%), Gaps = 4/374 (1%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+C L+ + I A ++ + + G + + I F + +L +LD +
Sbjct: 106 LCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVFAYNALISGFIKANQLENANRVLDRM 164
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ R + V ++I FC +++ A ++ +EL C+P I Y I+ E L G
Sbjct: 165 KSR--GFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDG 222
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ +L + G+ P T Y I G+ E + +A EL + S D N
Sbjct: 223 GIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYN 282
Query: 336 ALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
L+ ++ S S + MI G P + T S L LC+ K +E V + + +
Sbjct: 283 ILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEK 342
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D Y+ +++ C GRL A ++ M G PD+ YN++M CR A
Sbjct: 343 GLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQA 402
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++++++ GC N+ +YN L S G+ AL + +L +G+ PD TY SL+
Sbjct: 403 LEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISC 462
Query: 515 LCQETNLQAAFEVF 528
LC++ + A E+
Sbjct: 463 LCRDGMVDEAIELL 476
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 149/326 (45%), Gaps = 1/326 (0%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I GF K ++E A +VLD ++ R PD + Y I+ F G + + ++ K
Sbjct: 144 LISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDN 203
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAI 350
P Y I I++ I A +L + ++S D NA+I G + A
Sbjct: 204 CEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAF 263
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ +G P + T + L + L R K E ++ + + ++ ++++++ L
Sbjct: 264 ELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTL 323
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C G++ EA +++ MK KGL PD Y+ L+ CRE L A + + M + GC ++
Sbjct: 324 CRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDI 383
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
YN +++ G+ + AL +F + E G P+ ++Y +L L + A E+ K
Sbjct: 384 VNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILK 443
Query: 531 SVNHDVMLARSILSTFMISLCRRVLI 556
+N + ++ + LCR ++
Sbjct: 444 LLNQGIDPDEITYNSLISCLCRDGMV 469
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 166/413 (40%), Gaps = 40/413 (9%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALK 175
D Y +I I+ + A V + +K P++ N ++ S G +D AL+
Sbjct: 137 DVFAYNALISGFIKANQLENANRVLDRMK--SRGFLPDVVTYNIMIGSFCSRGKLDLALE 194
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+F+E+ E + I + + I + + + +LDE+ + + ++ II G
Sbjct: 195 IFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSK--GLEPDTLTYNAIIRG 252
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
CK V++AF++L L R CKPD I Y I+ G E E ++ + +G P
Sbjct: 253 MCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPN 312
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNF 355
+ I G + GK A+
Sbjct: 313 VVTHSILI---------------GTLCRDGKV-------------------EEAVNLLRS 338
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M EKG P L C+ + D E + + ++ D+ +YN +++ LC +G+
Sbjct: 339 MKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGK 398
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+A V +++ G P+VS YN+L A A ++ ++ G + TYN
Sbjct: 399 ADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNS 458
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
LIS G ++ A+ L +M P+ +Y +L GLC+ A EV
Sbjct: 459 LISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVL 511
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 130/299 (43%), Gaps = 39/299 (13%)
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVS-GKFTIDDDVLNALI-GSVSSIDPRS 348
G P + I G R I +A + E++ GK D NALI G + + +
Sbjct: 99 GYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGK--PDVFAYNALISGFIKANQLEN 156
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A + M +G +P + T + + + C R K D +E+++ L ++ + +Y +++
Sbjct: 157 ANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIE 216
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE-------DLLRP-------- 453
G + A ++ EM KGL+PD YN+++ C+E +LLR
Sbjct: 217 ATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKP 276
Query: 454 --------------------AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+KL +M + GC N+ T++ILI G++E A+ L
Sbjct: 277 DIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLL 336
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+M EKG+ PDA Y L+ G C+E L A E ++ + +T M LCR
Sbjct: 337 RSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCR 395
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 89/185 (48%), Gaps = 9/185 (4%)
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C+ K +E + + + Y D+ ++ S + +A V++ ++R G PDV
Sbjct: 80 CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDV 138
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YN+L+ + + L A ++ D+M + G ++ TYNI+I F G+++ AL +F
Sbjct: 139 FAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEE 198
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAF----EVFNKSVNHDVMLARSILSTFMISLC 551
+L+ P TYT L+E + + A E+ +K + D + +I+ +C
Sbjct: 199 LLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIR----GMC 254
Query: 552 RRVLI 556
+ +++
Sbjct: 255 KEMMV 259
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 136/579 (23%), Positives = 240/579 (41%), Gaps = 48/579 (8%)
Query: 14 SQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLS---PSLVARVINPYLLTHHSLALGF 70
+ + + +N +W LL + LR SL+ P + +++ L S+ L
Sbjct: 59 NDTVFNNTNGLDSGTEWERLL-KPFDLPELRTSLTRITPYQLCKLLELPLDVPTSMEL-- 115
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
F WA Q + H Y+ ++ L + + D++L Q+K I S++ I+
Sbjct: 116 FQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYG 175
Query: 131 QGKNTQKAFSVFNEVK--FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFS 188
+ +A + +++ ++CE N +L VL + +F EM +G+ +
Sbjct: 176 RAGLPGQATRLLLDMRGVYSCEPTFRSY-NVVLDVLLAGNCPKVVPNVFYEMLSKGISPT 234
Query: 189 TIGFGVFIWKFCENAKLGQVLSMLDEVRKR---ENSMINGSVIAVL-------------- 231
FGV + C ++ ++L ++ + N+++ ++I L
Sbjct: 235 VYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLE 294
Query: 232 ----------------IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
IHG CK R+ EA K++D + +R P+ Y ++ MG
Sbjct: 295 EMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMG 354
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE-LGEVIVSGKFTIDDDVL 334
V E ++L K P + I G + R+ EAK + E ++S D
Sbjct: 355 KVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTY 410
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N LI G SA N M KG P + T + L CK + +E V +S
Sbjct: 411 NTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 470
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ YN ++S LC ++++A + +M KG PD+ +NSL+ C+ +
Sbjct: 471 KGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEE 530
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A L+ M G N TYN LI F G ++ AL+L ++ML +G D TY L++
Sbjct: 531 ALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIK 590
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
LC+ N++ +F ++ + + + LCR
Sbjct: 591 ALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCR 629
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 193/413 (46%), Gaps = 14/413 (3%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
FT + +Y ++ L +++ +L +V + L + +I + +A
Sbjct: 336 FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVL----FNTLINGYVSRGRLDEAK 391
Query: 140 SVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
+V +E + GP+I N+L+ L GY+ +A ++ +EM +G E + I + + I
Sbjct: 392 AVMHESMLSV-GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILID 450
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
+FC+ +L + ++LDE+ + ++ +V +I CK ++V++A + ++ + C
Sbjct: 451 RFCKEGRLEEARNVLDEMSGKGLAL--NAVGYNCLISALCKDEKVQDALNMFGDMSSKGC 508
Query: 258 KPDFIAYRIVAEEFKLMG-SVFEREVVLKKKRKL-GVAPRTNDYREFILGLIVERRICEA 315
KPD + + F L + FE + L + L GV T Y I + + EA
Sbjct: 509 KPDIFTFNSLI--FGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEA 566
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+L ++ +DD N LI ++ + + + F M+ KG P + + L
Sbjct: 567 LKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILING 626
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LC+ +E + + D+ +YN +++ LC +GR +EA + +++ +G+ PD
Sbjct: 627 LCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPD 686
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
YN+L+ C+E + A L + SG N T+ IL+S F + G+ E
Sbjct: 687 AITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 207/483 (42%), Gaps = 48/483 (9%)
Query: 88 HSILKSLSLSRQ---INAIDSVLKQVK-VNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
HS L+S + RQ ++A+D VL Q+ + I D+ VY ++ L++G + +V++
Sbjct: 117 HSFLESYA--RQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYS 174
Query: 144 EVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
E+ I P++ N+L+ L + A+ M +EMS GV F + F E
Sbjct: 175 EM--GERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVE 232
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF--------------- 246
+ L + + R E V ++I+G+CK RVE+A
Sbjct: 233 EGSIKAALRV--KARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQ 290
Query: 247 --------------------KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
KV+D + PD Y IV G + E + +L +
Sbjct: 291 ITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQ 350
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-D 345
+ G P + I+ L R+ EA +L + + D N LI ++ + D
Sbjct: 351 MVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGD 410
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
P+ A+ F M G P T + L NLC K + +++ K + + +YN
Sbjct: 411 PQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNT 470
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++ LC R+ EA V +M +G+ + +N+L++ C++ + A +L QM + G
Sbjct: 471 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEG 530
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
N TYN +++ + + G+I+ A + M G D TY +L+ GLC+ Q A
Sbjct: 531 LQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVAL 590
Query: 526 EVF 528
++
Sbjct: 591 KLL 593
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 105/493 (21%), Positives = 207/493 (41%), Gaps = 47/493 (9%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF-I 125
AL N A + +F P Y I++ L + + VL V ++ + R +
Sbjct: 60 ALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVL----VTEMRREGHQVRVGV 115
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCED--IGPE----ICNSLLAVLASDGYIDNALKMFDE 179
+ S ++ Q+ F ++ N D G + + N LL VL + ++ E
Sbjct: 116 VHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSE 175
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M RG++ + F + C ++ + ML+E+ + + ++ GF +
Sbjct: 176 MGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSS--SGVAPDETTFTTLMQGFVEE 233
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
++ A +V + C P + ++ + +G V + ++++ G P Y
Sbjct: 234 GSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITY 293
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
F+ GL C+ +G A+ + M+++
Sbjct: 294 NTFVNGL------CQNGHVGH----------------------------ALKVMDVMVQE 319
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P + T + + LCK + +E + + D+ ++N ++ LC+ RL EA
Sbjct: 320 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEA 379
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ +++ KGL PDV +N L+ A C+ + A +L+++M +SGC+ + TYN LI
Sbjct: 380 LDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDN 439
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+G++ AL L M G TY ++++GLC++ ++ A EVF++ +
Sbjct: 440 LCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 499
Query: 540 RSILSTFMISLCR 552
+T + LC+
Sbjct: 500 AITFNTLIDGLCK 512
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 155/332 (46%), Gaps = 1/332 (0%)
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
+V+ +++ +G +++ V E+ R KPD + + + + V ++L+
Sbjct: 150 TVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLE 209
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID 345
+ GVAP + + G + E I A + ++ + +N LI +
Sbjct: 210 EMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLG 269
Query: 346 P-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
A+ + I G P T + LC+ ++V V+ + D+ +YN
Sbjct: 270 RVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYN 329
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
++V+ LC +G+L EA G++ +M +G PD++ +N+L+ A C + L A L Q+
Sbjct: 330 IVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLK 389
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G S ++ T+NILI+ +VG+ + ALRLF M G PD TY +L++ LC L A
Sbjct: 390 GLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKA 449
Query: 525 FEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
++ + + + +T + LC+++ I
Sbjct: 450 LDLLKEMESAGCPRSTVTYNTIIDGLCKKMRI 481
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 184/423 (43%), Gaps = 7/423 (1%)
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
L R +A+ + +++ N D Y + L Q + A V + + D
Sbjct: 268 LGRVEDALGYIQQEI-ANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVF 326
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
N ++ L +G ++ A + ++M RG F I C +L + L + +V
Sbjct: 327 TYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQV 386
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ + ++I+ CK + A ++ +E++ C PD + Y + + +G
Sbjct: 387 TLK--GLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLG 444
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ + +LK+ G T Y I GL + RI EA+E+ + + + + N
Sbjct: 445 KLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFN 504
Query: 336 ALIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
LI + D R A + MI +G P T +++ + CK+ + ++ + ++A
Sbjct: 505 TLIDGLCK-DKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTA 563
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
N + D+ +Y +++ LC +GR + A +++ M+ KG+ YN ++++ R + R
Sbjct: 564 NGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRD 623
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVG-EIEGALRLFHNMLEKGVAPDATTYTSLL 512
A L+ +M G + TY I+ G I A M++KG P+ +++ L
Sbjct: 624 AMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLA 683
Query: 513 EGL 515
EGL
Sbjct: 684 EGL 686
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 158/369 (42%), Gaps = 10/369 (2%)
Query: 82 HSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
H P +Y+ ++ L + Q+ +L Q+ D + + +I +L G ++A
Sbjct: 321 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEAL 380
Query: 140 SVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
+ +V + + P++ N L+ L G AL++F+EM G + + I
Sbjct: 381 DLARQVTL--KGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLID 438
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
C KLG+ L +L E+ +V II G CK R+EEA +V D++ ++
Sbjct: 439 NLCSLGKLGKALDLLKEMESA--GCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 496
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
+ I + + + + + ++ + G+ P Y + + I +A +
Sbjct: 497 SRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 556
Query: 318 LGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+ + + + F +D LI G + + A+ M KG T + + ++L
Sbjct: 557 ILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLF 616
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC-TSGRLREAYGVIQEMKRKGLDPDV 435
+RN + + + +++ ++ D +Y ++ LC G +REA+ + EM KG P+
Sbjct: 617 RRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEF 676
Query: 436 SFYNSLMEA 444
S + L E
Sbjct: 677 SSFRMLAEG 685
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 119/500 (23%), Positives = 214/500 (42%), Gaps = 59/500 (11%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK-FNCEDIGPEIC--NSLLA 162
VL+++K + I + S + +I + + +KA F+ ++ F+C+ P++ N +L
Sbjct: 115 VLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCK---PDLFAFNLILH 171
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
L AL ++++M + + +G+ I C+ K L + DE+ R +
Sbjct: 172 FLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDR--GI 229
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+ +I +++ G C+ K++ +A ++ ++R C D I Y ++ F G + +
Sbjct: 230 LPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFT 289
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+L+ K G Y I GL RR EA + ++ D + +I +S
Sbjct: 290 LLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLS 349
Query: 343 SIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ R A+ M E+G P + L K C DE + +S +D F +
Sbjct: 350 Q-EGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNN 408
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL------------------- 441
+Y++++ +C +G + +A + +EM++ G P V +NSL
Sbjct: 409 HTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQ 468
Query: 442 -----------------------------MEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
ME C ++ A KL Q+ SG +++T
Sbjct: 469 MEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRT 528
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YNILI+ F + G I GA +LF M KG PD+ TY +L++GL + + A E+F + V
Sbjct: 529 YNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMV 588
Query: 533 NHDVMLARSILSTFMISLCR 552
+ S T M CR
Sbjct: 589 KKGCVPESSTYKTIMTWSCR 608
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 196/444 (44%), Gaps = 24/444 (5%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
+V Q+ + D Y +I L + TQ A +F+E+ I + +L+ L
Sbjct: 184 AVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGL 243
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
I +A ++F +M G I + V + FC++ L ++L + K +
Sbjct: 244 CQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTK------D 297
Query: 225 GSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
G ++ V+ +I+G + +R EEA ++ KPD + Y I+ G V E
Sbjct: 298 GHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEA 357
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-G 339
+L + + G+ P T Y I G + EA+ L I ++ + LI G
Sbjct: 358 LTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICG 417
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY----------- 388
+ A F M + G +P++ T ++L LCK N+ +E ++
Sbjct: 418 MCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSL 477
Query: 389 --KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
++ D D+ S VM+ LC SG + +AY ++ ++ G+ PD+ YN L+ C
Sbjct: 478 FLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFC 537
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ + A KL+ +M G + TY LI G E AL +F M++KG P+++
Sbjct: 538 KFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESS 597
Query: 507 TYTSLLEGLCQETNLQAAFEVFNK 530
TY +++ C+E N+ A V+ K
Sbjct: 598 TYKTIMTWSCRENNISLALSVWMK 621
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/485 (20%), Positives = 189/485 (38%), Gaps = 83/485 (17%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK-NT 135
+P HS YHS ++ S +++ I L ++ + S + + I S++Q + +T
Sbjct: 18 KPTLFHS---YHSRTNPIATSIEVSTIIETLDPMEDGLKVISSRIRSYTITSVLQEQPDT 74
Query: 136 QKAFSVF----NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+ F +F C + I L+ A + Y K+ E+ + ++ S+
Sbjct: 75 RLGFRLFIWSLKSWHLRCRTVQDLIIGKLIKENAFELY----WKVLQELKNSAIKISSEA 130
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
F V I + E +DE + E+F ++ +
Sbjct: 131 FSVLIEAYSEAG--------MDE--------------------------KAVESFSLMRD 156
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+CKPD A+ ++ +++K+ F+L L V +
Sbjct: 157 F---DCKPDLFAFNLILH------------FLVRKE-------------AFLLALAVYNQ 188
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
+ + +V+ G + G + + A+V F+ M ++G +P S +
Sbjct: 189 MLKCNLNPDVVTYGIL---------IHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIV 239
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
LC+ K + ++ + A+ D+ +YNV+++ C SG L +A+ ++Q + + G
Sbjct: 240 LSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGH 299
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
V Y L+ R A + +M ++ Y I+I S+ G + AL
Sbjct: 300 ILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALT 359
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
L M E+G+ PD Y +L++G C L A + + HD S + +C
Sbjct: 360 LLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMC 419
Query: 552 RRVLI 556
+ LI
Sbjct: 420 KNGLI 424
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/456 (20%), Positives = 190/456 (41%), Gaps = 46/456 (10%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+ +L S ++ ++L+ + + L Y +I L + + ++A +
Sbjct: 269 ITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQ- 327
Query: 145 VKFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
K E+I P++ + + L+ +G + AL + EM+ RG+ TI + I FC+
Sbjct: 328 -KMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDM 386
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L + S+ E+ K + N ++LI G CK + +A + E+ C P +
Sbjct: 387 GYLDEAESLRLEISKHD-CFPNNHTYSILIC-GMCKNGLINKAQHIFKEMEKLGCLPSVV 444
Query: 263 AYRIVA---------EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+ + EE +L+ ++ E+V K L ++ T+ + ++ R+C
Sbjct: 445 TFNSLINGLCKANRLEEARLL--FYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLC 502
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
E+ G ++ + K + +++ G +P + T + L
Sbjct: 503 ES---GMILKAYKLLMQ-------------------------LVDSGVLPDIRTYNILIN 534
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
CK + +++K + + D +Y ++ L +GR +A + ++M +KG P
Sbjct: 535 GFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVP 594
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+ S Y ++M CRE+ + A +W + + ++ F E++ A+R
Sbjct: 595 ESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDN-EELQTAIRRL 653
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
M K D YT L GL Q AF +F+
Sbjct: 654 LEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFS 689
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 48/255 (18%), Positives = 101/255 (39%), Gaps = 37/255 (14%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L G I A K+ ++ GV + + I FC+ + + E++ + + +
Sbjct: 501 LCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGH--M 558
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVA--------------- 268
SV +I G + R E+A ++ +++ + C P+ Y+ +
Sbjct: 559 PDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSV 618
Query: 269 -------------EEFKLMGSVFERE---VVLKKKRKLGVAPRTND---YREFILGLIVE 309
E+ +++ F+ E +++ ++ + + D Y F++GL+
Sbjct: 619 WMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQA 678
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTL 368
+R CEA + V+ K I LIG + ++ A+ F F +E+G
Sbjct: 679 KRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPIC 738
Query: 369 SNLSKNLCKRNKSDE 383
+ L NL ++ D+
Sbjct: 739 NQLLCNLLHLDRKDD 753
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 178/367 (48%), Gaps = 16/367 (4%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCEN------AKLGQ-VLSMLDEVR---KRENSM 222
A K+FD+M + G+ S +FI E+ A G+ VL +++E++ + N
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
VI +L CK +V EA +VL E+ PD + Y + + F +G+V
Sbjct: 225 TYNGVILLL-----CKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYR 279
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSV 341
+ + +K ++P Y I GL R+ EA +L +V + D+ ALI G
Sbjct: 280 LFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYC 339
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ A N M++ G P + T + L+ LCK + D E+ + ++
Sbjct: 340 KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIY 399
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN +V+ LC +G + +A ++++M+ G PD Y +LM+A C+ + A +L QM
Sbjct: 400 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 459
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ T+N+L++ F G +E +L MLEKG+ P+ATTY SL++ C N+
Sbjct: 460 LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNM 519
Query: 522 QAAFEVF 528
+A E++
Sbjct: 520 RATTEIY 526
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 156/353 (44%), Gaps = 3/353 (0%)
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLII 233
LK+ +EM +G++ + + I C+ K+ + +L E+ + VI +I
Sbjct: 208 LKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMI--SEGIAPDGVIYTTLI 265
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
GFCK V A+++ DE++ R+ PDFI Y V G V E + + + +
Sbjct: 266 DGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLE 325
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVF 352
P Y I G E ++ EA L ++ T + AL G + +A
Sbjct: 326 PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANEL 385
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
+ M KG + T ++L LCK D+ V++ K + + D +Y ++ C
Sbjct: 386 LHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCK 445
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
S + A+ ++++M + L P V +N LM C +L +KL M G N T
Sbjct: 446 SREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATT 505
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
YN LI ++ + ++ M KGV PD TY L++G C+ N++ A+
Sbjct: 506 YNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW 558
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 191/434 (44%), Gaps = 11/434 (2%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PN P +Y+ ++ L + ++ + VL+++ I D +Y +I + N
Sbjct: 220 KPN----PYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVS 275
Query: 137 KAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
A+ +F+E++ I P+ +++ L G + A K+F EM + +E + +
Sbjct: 276 SAYRLFDEMQK--RKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTA 333
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
I +C+ K+ + S+ +++ + + V + G CK V+ A ++L E+
Sbjct: 334 LIDGYCKEGKMKEAFSLHNQMLQM--GLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 391
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
+ + + Y + G++ + ++K G P Y + R +
Sbjct: 392 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 451
Query: 315 AKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
A EL ++ + N L+ G S +M+EKG +P +T ++L K
Sbjct: 452 AHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIK 511
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
C RN E+Y+ + A D +YN+++ C + ++EA+ + ++M KG +
Sbjct: 512 QYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNL 571
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
VS YN+L++ + A++L++QM G + + YNI + G++E L L
Sbjct: 572 TVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELC 631
Query: 494 HNMLEKGVAPDATT 507
+EK + D T
Sbjct: 632 DEAIEKCLVGDIQT 645
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 173/394 (43%), Gaps = 3/394 (0%)
Query: 154 PEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
P N ++ +L G + A ++ EM G+ + + I FC+ + + D
Sbjct: 223 PYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFD 282
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
E++KR+ S + +I G C+ RV EA K+ E+ + +PD + Y + + +
Sbjct: 283 EMQKRKIS--PDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCK 340
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
G + E + + ++G+ P Y GL + A EL + ++
Sbjct: 341 EGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYT 400
Query: 334 LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
N+L+ G + + A+ M G P T + L CK + E+ + +
Sbjct: 401 YNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQML 460
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ + ++NV+++ C SG L + +++ M KG+ P+ + YNSL++ C + +R
Sbjct: 461 DRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMR 520
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
+++ M A G + TYNILI + ++ A L +M+ KG ++Y +L+
Sbjct: 521 ATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALI 580
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
+G + A E+F + ++ R I + F
Sbjct: 581 KGFYKRKKFLEARELFEQMRREGLVADREIYNIF 614
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/431 (20%), Positives = 181/431 (41%), Gaps = 9/431 (2%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAV 163
+++++++ + + Y +I L + +A V E+ E I P+ I +L+
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMI--SEGIAPDGVIYTTLIDG 267
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE-VRKRENSM 222
G + +A ++FDEM R + I + I C+ ++ + + E V KR +
Sbjct: 268 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR---L 324
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
V +I G+CK +++EAF + +++ P+ + Y +A+ G V
Sbjct: 325 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 384
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS-V 341
+L + + G+ Y + GL I +A +L + + F D L+ +
Sbjct: 385 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC 444
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
S + A M+++ PT+ T + L C ++ ++ K + +
Sbjct: 445 KSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNAT 504
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN ++ C +R + + M KG+ PD + YN L++ C+ ++ A L M
Sbjct: 505 TYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDM 564
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G + + +YN LI F + + A LF M +G+ D Y + E +
Sbjct: 565 VGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKM 624
Query: 522 QAAFEVFNKSV 532
+ E+ ++++
Sbjct: 625 ELTLELCDEAI 635
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 91/194 (46%)
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
KG P T + + LCK K E V + + + D Y ++ C G +
Sbjct: 217 KGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSS 276
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
AY + EM+++ + PD Y +++ C+ + A KL+ +M + TY LI
Sbjct: 277 AYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALID 336
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+ + G+++ A L + ML+ G+ P+ TYT+L +GLC+ + A E+ ++ + L
Sbjct: 337 GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL 396
Query: 539 ARSILSTFMISLCR 552
++ + LC+
Sbjct: 397 NIYTYNSLVNGLCK 410
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 179/396 (45%), Gaps = 7/396 (1%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
SL+ + +++A K+F+ M ++G + + + I CE ++ + +S+ ++R
Sbjct: 254 SLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMR-- 311
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
E+ +IIH R E + +E+R R C+P+ Y ++ + +
Sbjct: 312 EDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLD 371
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
E +L + + G+ P Y I G E RI A E+ ++ S ++ N LI
Sbjct: 372 ESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELI 431
Query: 339 GSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
S A+ + M+E P+L T ++L CK D ++ +L N
Sbjct: 432 CGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLV 491
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D +Y+V + LC S R+ EA + +K KG+ + Y +L++ C+ + A L
Sbjct: 492 PDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISL 551
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
++M + C N TYN LI + G+++ L + NM + GV P TYT L+E + +
Sbjct: 552 LERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLR 611
Query: 518 ETNLQAAFEVFNKSVNH----DVMLARSILSTFMIS 549
E + A VFN+ V+ DV + + T+ S
Sbjct: 612 EGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTS 647
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 98/474 (20%), Positives = 187/474 (39%), Gaps = 42/474 (8%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
Q + +Y S++ + +N+ V + + Y II L +
Sbjct: 242 QAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRID 301
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDN--ALKMFDEMSHRGVEFSTIGFGV 194
+ S+F +++ +D P + + + A G N + +F+EM R E + + V
Sbjct: 302 EGISLFKKMRE--DDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTV 359
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
+ C+ KL + +L+E+ E ++ V +I G+C+ R+E A ++L +
Sbjct: 360 MVDAMCKERKLDESRRILNEMM--EKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMES 417
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
C+P+ Y + F V + +L K + + P Y I
Sbjct: 418 NNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDS 477
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
A +L +++ D + I ++ S A FN + EKG + L
Sbjct: 478 AYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALID 537
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
CK K DE + + + + + D + +YN ++ +C G+++E +++ M + G+ P
Sbjct: 538 GHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKP 597
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASG----------------CSGNLK------ 471
V+ Y L+E RE A ++++QM + G SGN+K
Sbjct: 598 TVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMM 657
Query: 472 -------------TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
TY +LIS + +G A + ML+ G P + +L+
Sbjct: 658 ARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 144/314 (45%), Gaps = 5/314 (1%)
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
++E +V E+ P+ + + MG++ E + + K + G++P + Y
Sbjct: 195 IDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTS 254
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRSAIVFFNFMIE 358
ILG + A ++ ++ + ++ +I + ID I F M E
Sbjct: 255 LILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRID--EGISLFKKMRE 312
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
PT+ T + + L +++ E ++++ + ++ +Y VMV +C +L E
Sbjct: 313 DDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDE 372
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
+ ++ EM KGL P V YN+L+ C E + A ++ M ++ C N +TYN LI
Sbjct: 373 SRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELIC 432
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
FS+ + A+ L MLE + P TY SL+ C+ + +A+++ + + ++
Sbjct: 433 GFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVP 492
Query: 539 ARSILSTFMISLCR 552
+ S F+ +LC+
Sbjct: 493 DQWTYSVFIDTLCK 506
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 27/227 (11%)
Query: 334 LNALIGSVSSIDPRSAIVFFNFM--IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
+++L + ++P A+ FFN + I+ G T+ + S L K+L
Sbjct: 87 VSSLFNNHPDLNPNIALQFFNSLPLIKPGFKHTVKSHSFL----------------LKIL 130
Query: 392 SANDYFTDMESYNVMVSFLCTS-GRLREAYGVIQEMKRKGLDPDVSF------YNSLMEA 444
N+ F E + + C S +R +++M R D D+ F YN L+
Sbjct: 131 IPNNLFGVGEKIRISMIKACVSVDDIRFLLDFLRQMNRD--DNDIKFKLSVRSYNELLMM 188
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
R ++ K+++ +M N+ T N +++ +S++G I A + + G++PD
Sbjct: 189 LARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPD 248
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+ TYTSL+ G C+ ++ +A++VFN N +T + LC
Sbjct: 249 SFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLC 295
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 119/523 (22%), Positives = 242/523 (46%), Gaps = 37/523 (7%)
Query: 34 LEQTLHQLGLRDSLSP-SLVARVIN---PYLLTHHSLALGFFNWASQQPNFTHSPLSY-- 87
L T+ Q+ SL+P SL+ V+N P+ AL FFN A ++ +S + +
Sbjct: 15 LNGTMLQVVSLSSLTPDSLITTVLNCRSPWK------ALEFFNAAPEKNIQLYSAIIHVL 68
Query: 88 -----------------HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
+++KS S L ++K +K T +VY +I L
Sbjct: 69 VGSKLLSHARYLLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFT--PNVYGELIIVLC 126
Query: 131 QGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTI 190
+ + ++A S++++V + + CN LL VL G + ++++EM G+ S I
Sbjct: 127 KMELVEEALSMYHKVG---AALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVI 183
Query: 191 GFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD 250
FG I C L + M DE+R + ++ ++ ++I G C ++EEA +
Sbjct: 184 TFGTLIDGCCRQGDLLRAQEMFDEMRVK--GIVPTVIVYTILIRGLCSDNKIEEAESMHR 241
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
+R P+ Y + + + + + + + + G+ P + I GL
Sbjct: 242 AMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFG 301
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRV-PTLSTLS 369
+ A+ L ++ T + V N+LI + + S + +E+ V P + T S
Sbjct: 302 EMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYS 361
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
L + LC ++++E +++ ++ + +YN ++ C G++ +A + +M
Sbjct: 362 ILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTEN 421
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
G++P+V +++L++ C+ L+ A ++ +M S ++ TY +I + G ++ A
Sbjct: 422 GVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEA 481
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
L+L+ +ML+ G+ P+ T + LL+GLC++ + A E+F + +
Sbjct: 482 LKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKI 524
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 151/343 (44%), Gaps = 49/343 (14%)
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF----KVLDELRIRECKPDFIAYRIV-A 268
E+ + ++S +V LII CK + VEEA KV L I+ C + + Y +V
Sbjct: 104 ELSRLKSSKFTPNVYGELIIV-LCKMELVEEALSMYHKVGAALTIQAC--NVLLYVLVKT 160
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFT 328
F+L+ ++E + G++P + I G + + A+E+
Sbjct: 161 GRFELLWRIYEEMI------SNGLSPSVITFGTLIDGCCRQGDLLRAQEM---------- 204
Query: 329 IDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
F+ M KG VPT+ + L + LC NK +E ++
Sbjct: 205 ------------------------FDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMH 240
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+ + + ++ +YN ++ C ++A + Q+M +GL PDV + L++ C+
Sbjct: 241 RAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKF 300
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
++ A+ L+ M + N+ YN LI + +VG++ A+ LF + V+PD TY
Sbjct: 301 GEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTY 360
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+ L+ GLC + + A +F K + LA S+ +I C
Sbjct: 361 SILIRGLCSVSRTEEAGNIFEKMTKEGI-LANSVTYNSLIDGC 402
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 187/407 (45%), Gaps = 21/407 (5%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN +L + G +D A+ + +++ G E + + + C + G V ++DE+
Sbjct: 184 CNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM- 242
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
R + N LI + C+ E +VL ++ C PD Y + + G
Sbjct: 243 VRVDCAPNIVTFNTLIGY-LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ +L + G+ P Y + GL R EA+EL + +DD N
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 337 LI------GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
L+ G V + I M+ G +P + T + + CK DE V + K
Sbjct: 362 LVDFFCQNGLVDRV-----IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+S+ + SY +++ LC++GR +A ++ +M ++G P+ +N+L+ C++ L
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ A +L QM +GCS +L +Y+ +I + G+ E AL L + M+ KG++P+ Y+S
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 511 LLEGLCQETNLQAAFEVFNK----SVNHDVMLARSILSTFMISLCRR 553
+ L +E + ++F+ ++ D +L +++S SLC+R
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVIS----SLCKR 579
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/473 (21%), Positives = 209/473 (44%), Gaps = 45/473 (9%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY+++LK L ++++ ++ ++ ++ + +D + +LI F +E
Sbjct: 217 VSYNAVLKGLCMAKRWGDVEELMDEM----VRVDCAPNIVTFNTLIGYLCRNGLFERVHE 272
Query: 145 VKFNCEDIG--PEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
V + G P+I +++ + +G+++ A ++ + M G++ + + + + C
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + +L E+ +++ + V +++ FC+ V+ ++L+++ C PD
Sbjct: 333 SAERWKEAEELLSEMFQKDCPL--DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPD 390
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
I Y V F G + E ++LK G P T Y + GL R +A+EL
Sbjct: 391 VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL-- 448
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ MI++G P T + L LCK+
Sbjct: 449 --------------------------------MSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
++ +E+ K + N D+ SY+ ++ L +G+ EA ++ M KG+ P+ Y+S
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+ A RE + +++D + + + YN +IS + E + A+ F M+ G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
P+ +TYT L++GL E + A E+ ++ + L + ++ F IS C +
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGA-LRKHLMRHFGISNCTQ 648
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 133/291 (45%), Gaps = 7/291 (2%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
++ G C R+ +A +VLDE+ + C P Y ++ E G VL+ G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSSIDPRSA 349
T + +L I E+ C + +G + F + D++ NA++ + + R
Sbjct: 177 CTLDTGNCN-LVLNAICEQG-CVDEAVGLLRKLAFFGCEADIVSYNAVLKGL-CMAKRWG 233
Query: 350 IV--FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
V + M+ P + T + L LC+ + + EV +S + D+ Y ++
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+C G L A ++ M GL P+V YN++++ C + + A++L +MF C
Sbjct: 294 DGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ T+NIL+ F + G ++ + L ML G PD TYT+++ G C+E
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 169/393 (43%), Gaps = 36/393 (9%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L + G I +AL++ DEMS +G + V + C + + +L+ + + ++
Sbjct: 121 LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLD 180
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
G+ L+++ C+ V+EA +L +L C+ D ++Y V + + + E +
Sbjct: 181 TGN--CNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEEL 238
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
+ + ++ AP + I G + +G F +VL
Sbjct: 239 MDEMVRVDCAPNIVTFNTLI---------------GYLCRNGLFERVHEVLAQ------- 276
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
M E G P + + + +CK + E+ + + ++ Y
Sbjct: 277 ------------MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N ++ LC++ R +EA ++ EM +K D +N L++ C+ L+ +L +QM +
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
GC ++ TY +I+ F + G I+ A+ L +M G P+ +YT +L+GLC
Sbjct: 385 HGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD 444
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
A E+ ++ + +T + LC++ L+
Sbjct: 445 AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%)
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+V LCT GR+ +A V+ EM KG P Y+ ++EA CR R + ++ + M A G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
C+ + N++++ E G ++ A+ L + G D +Y ++L+GLC
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCRRVL 555
E+ ++ V D +T + LCR L
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGL 266
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 85/224 (37%), Gaps = 35/224 (15%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P T + + LC R + + +EV +S Y+V++ C SG R + V
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY--------- 473
++ M KG D N ++ A C + + A L ++ GC ++ +Y
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 474 --------------------------NILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
N LI G E + M E G PD
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
Y ++++G+C+E +L+ A E+ N+ ++ + +T + LC
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 206/468 (44%), Gaps = 15/468 (3%)
Query: 93 SLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK-FNCED 151
L + ++ + L+++++ + I + + + +A F C D
Sbjct: 7 GLPAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRD 66
Query: 152 IGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM 211
G + N LL L + + + ++D M GV+ + + + I C+N ++ M
Sbjct: 67 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126
Query: 212 LDEVRKR---ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVA 268
LDE+ ++ + + +G++++ G CK RVEEA L E + + + + +
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVS-----GMCKLGRVEEARGFLAETVPVQASYNAVVHALCG 181
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFT 328
E F+ M VF V+ + + G+ P Y + R + A + +VS T
Sbjct: 182 E-FR-MWEVFS---VVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCT 236
Query: 329 IDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
+ AL+ G A+ +++M+++G P+ + + L + LC ++
Sbjct: 237 PNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDF 296
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
+ + N + +Y+ +V +G L A + EMK G P+V Y ++++ C+
Sbjct: 297 FNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCK 356
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+ + A+ L D+M C N T+N LI + + G + AL +FH M G P+ T
Sbjct: 357 KMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRT 416
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
Y LL GL +E N + AF + + +N+ L+ +T + LC+ +
Sbjct: 417 YNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCM 464
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/434 (20%), Positives = 179/434 (41%), Gaps = 44/434 (10%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE- 144
SY++++ +L ++ + SV+ ++ + + Y I+ + + + + A ++
Sbjct: 171 SYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARM 230
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
V C P + +L+ DG + +AL M+ M G STI + V I C
Sbjct: 231 VSMGCT---PNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCI 287
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L L + +++ N+++ + ++ GF ++ A + +E++ CKP+ +
Sbjct: 288 GDLKGALDFFNSMKR--NALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVV 345
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + + E ++ K P T + I R+C+ +G
Sbjct: 346 VYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLI------GRLCDCGRVGR-- 397
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR-NKS 381
A+ F+ M G P T + L L + N
Sbjct: 398 --------------------------ALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHK 431
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
D V ++L+ N + + +YN +++ LC + A ++ M +G+ PD +N++
Sbjct: 432 DAFAMVIEMLN-NGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAI 490
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ A C+E + A L QM A C N+ Y ILIS+ G++ A+ ML +G+
Sbjct: 491 IHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGI 550
Query: 502 APDATTYTSLLEGL 515
P+ T+ L+ +
Sbjct: 551 CPNEATWNVLVRAI 564
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 117/474 (24%), Positives = 209/474 (44%), Gaps = 49/474 (10%)
Query: 118 DSSVYRFIIPSLIQG---KNTQKAFSVFNEVKFNCEDIGPEIC----NSLLAVLASDGYI 170
D+S F + +G N A + FN++ + P C N LLA L +
Sbjct: 65 DASFDNFAVRDKCKGGSFSNFDDALAYFNQMV----HMNPFPCITQFNQLLAALVRMKHY 120
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE--------NSM 222
D+ + ++ +M GV S + I C +G S+L ++ K N++
Sbjct: 121 DSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTL 180
Query: 223 INGSVIA-------------------------VLIIHGFCKGKRVEEAFKVLDELRIREC 257
ING I +I++G CK + A + ++ +C
Sbjct: 181 INGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDC 240
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
+P+ ++Y I+ + V E + R +G++P Y I G+ + +A
Sbjct: 241 EPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASI 300
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
L + ++ D + L+ ++ A+ F MI+ P + T S+L +C
Sbjct: 301 LFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVC 360
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K + E + + + + D+ ++++ V C G + EA +I M +GL P+V
Sbjct: 361 KSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVV 420
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YNSLM+ C + A+K++D M GC+ ++ +YNILI + + I+ A +LF M
Sbjct: 421 TYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEM 480
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH----DVMLARSILSTF 546
KG+ P++ T+T+L+ GLCQ AA E+F K +H D++ ++LS F
Sbjct: 481 SHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGF 534
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 168/376 (44%), Gaps = 21/376 (5%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L G A+ +M E + + + I C+N + + + + +R I
Sbjct: 219 LCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIG---I 275
Query: 224 NGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+ +V+ +I+G C + ++A + E+ KPD + + I+ + G V E
Sbjct: 276 SPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALS 335
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK-------FTIDDDVL- 334
V K ++ + P Y I G+ E+ L ++S F+I DV
Sbjct: 336 VFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFC 395
Query: 335 -NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
++ SI N MIE+G P + T ++L C ++ DE +V+ ++
Sbjct: 396 KKGMVSEAQSI--------INLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVN 447
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
D+ SYN+++ C S R+ EA + EM KGL P+ + +L+ C+
Sbjct: 448 KGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYA 507
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
AK+L+ +M + GC +L TY+ L+S F + G ++ AL LF + + + P+ LL
Sbjct: 508 AKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLG 567
Query: 514 GLCQETNLQAAFEVFN 529
G+C+ L+ A E+F+
Sbjct: 568 GMCKAGKLEDAKELFS 583
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 165/386 (42%), Gaps = 40/386 (10%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDE 179
Y II SL + + +A +F ++ I P + NSL+ + + G A +F E
Sbjct: 247 YSIIIDSLCKNRLVNEAVDLFYHMR--SIGISPTVVTYNSLIYGMCNSGQWKQASILFKE 304
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M ++ + F + + C+ + + LS+ ++ + +M V +IHG CK
Sbjct: 305 MLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMI--QIAMEPDIVTYSSLIHGVCKS 362
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+E+ +L+E+ R +PD + + I + F G V E + ++ + G+ P Y
Sbjct: 363 SLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTY 422
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
+ G + ++ EA+++ F+ M+ K
Sbjct: 423 NSLMDGYCLHSQMDEARKV----------------------------------FDIMVNK 448
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P + + + L K CK + DE +++ +S + ++ ++S LC +GR A
Sbjct: 449 GCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAA 508
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ ++M G PD+ Y++L+ C+ L A L++ + S N IL+
Sbjct: 509 KELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGG 568
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDA 505
+ G++E A LF ++ + + PD
Sbjct: 569 MCKAGKLEDAKELFSSLSIEELQPDV 594
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 121/274 (44%), Gaps = 34/274 (12%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
VL K KLG P + I GL +E RI EA E
Sbjct: 161 VLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQ------------------------ 196
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
++++ +G PT+ T + + LCK K+ + K + D ++ S
Sbjct: 197 ----------LDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVS 246
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y++++ LC + + EA + M+ G+ P V YNSL+ C + A L+ +M
Sbjct: 247 YSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEML 306
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
++ T++IL+ + G + AL +F M++ + PD TY+SL+ G+C+ + +
Sbjct: 307 EWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWK 366
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+ + N+ ++ ++ S ++ C++ ++
Sbjct: 367 ESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMV 400
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 166/401 (41%), Gaps = 22/401 (5%)
Query: 51 LVARVINPYLLTHHSLALGFFN---------WASQQPNFTHSP--LSYHSILKSLSLSRQ 99
+++R P + TH + G W + P +SY I+ SL +R
Sbjct: 200 IMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRL 259
Query: 100 INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEIC- 157
+N + ++ I+ Y +I + ++A +F E +++N + P++
Sbjct: 260 VNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWN---MKPDVVT 316
Query: 158 -NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
+ L+ L +G + AL +F +M +E + + I C+++ + ++L+E+
Sbjct: 317 FSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEML 376
Query: 217 KRENSMINGSVIAVLI-IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
R I V+ I + FCK V EA +++ + R +P+ + Y + + + L
Sbjct: 377 SRN---IRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHS 433
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ E V G AP Y I G RI EAK+L + + T +
Sbjct: 434 QMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHT 493
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
LI G + P +A F M G P L T S L CK DE + +++ L +
Sbjct: 494 TLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKS 553
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
+ +++ +C +G+L +A + + + L PDV
Sbjct: 554 QLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 82/218 (37%), Gaps = 37/218 (16%)
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
GS S+ D A+ +FN M+ P ++ + L L + D +V +Y+ +
Sbjct: 80 GSFSNFD--DALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSC 137
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+ + ++++ LC + + V+ ++ + G P + +N+L+ C E
Sbjct: 138 SVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIE---------- 187
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
G I A+ ++ +G P T+T ++ GLC+
Sbjct: 188 -------------------------GRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKI 222
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
AA K V D S + SLC+ L+
Sbjct: 223 GKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLV 260
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 124/565 (21%), Positives = 233/565 (41%), Gaps = 94/565 (16%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQI-NAIDSVLKQVK---VNKITLDSS--------- 120
S PNF HS S+ +++ L SR++ +A +L+ V+ V+++ + S
Sbjct: 226 TSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCG 285
Query: 121 ----VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKM 176
V+ ++ + +Q + ++ F +K + CNSLL L G++D A ++
Sbjct: 286 SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEI 345
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
+ E+ GV+ + + I C+N K+ S L ++ E + V +I+ +
Sbjct: 346 YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME--EKGVFPDVVTYNTLINAY 403
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
C+ +EEAF+++D + + KP Y + G + VL + K+G++P T
Sbjct: 404 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 463
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-------------- 342
Y ++ + +A+ + + + S D +ALIG +S
Sbjct: 464 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 523
Query: 343 ----SIDPRSAIVFF------------------NFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ P + I + M+E+G + T + + LCK
Sbjct: 524 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKM 583
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
E E++ ++ F D ++ +++ G + +A + + M ++ L PDV YN+
Sbjct: 584 LSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 643
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH------ 494
L++ C+ + +LW+ M + N +Y ILI+ + +G + A RL+
Sbjct: 644 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 703
Query: 495 -----------------------------NMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
NML KG+ PD TY +L+ G +E N+ AF
Sbjct: 704 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 763
Query: 526 EVFNKSVNH----DVMLARSILSTF 546
+ NK N DV+ IL+ F
Sbjct: 764 ALVNKMENSGLLPDVITYNVILNGF 788
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 171/387 (44%), Gaps = 9/387 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL + + +A ++FDEM +GV + F I +N L Q L +++
Sbjct: 467 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 526
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ +VI ++I GFC+ + EA KV DE+ + C D + Y + +
Sbjct: 527 A--GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKML 584
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E + + + + GV P + I G + + +A L E+++ D N L
Sbjct: 585 SEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTL 644
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G + +N MI + P + L C E ++ + +
Sbjct: 645 IDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGF 704
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ + N +V C +G +A + M KG+ PD YN+L+ +E+ + A
Sbjct: 705 EATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFA 764
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L ++M SG ++ TYN++++ FS G ++ A + M+E+GV PD +TYTSL+ G
Sbjct: 765 LVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHV 824
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSIL 543
+ NL+ AF V HD ML R +
Sbjct: 825 TQNNLKEAFRV------HDEMLQRGFV 845
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 192/423 (45%), Gaps = 7/423 (1%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y++I+ L + + VL ++ ++ D++ Y ++ + N A +F+E
Sbjct: 429 FTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDE 488
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ + + P++ + +L+ +L+ +G +D ALK F +M + G+ + + + I FC N
Sbjct: 489 MP--SQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRN 546
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+ + L + DE+ ++ + V I++G CK K + EA ++ E+ R PDF
Sbjct: 547 GVMSEALKVRDEMLEQGCXL--DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 604
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
+ + + G++ + + + + + P Y I G + + EL +
Sbjct: 605 TFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM 664
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
+S + + LI ++ S A ++ M+EKG T+ T + + K C+ +
Sbjct: 665 ISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNA 724
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+ E + D +YN +++ + A+ ++ +M+ GL PDV YN +
Sbjct: 725 VKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVI 784
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ R+ ++ A+ + +M G + + TY LI+ ++ A R+ ML++G
Sbjct: 785 LNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 844
Query: 502 APD 504
PD
Sbjct: 845 VPD 847
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 136/275 (49%), Gaps = 4/275 (1%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
VLK K G+ N + GL+ + A E+ + +V ++ LN +I ++
Sbjct: 313 VLKSK---GLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALC 369
Query: 343 SIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ F + M EKG P + T + L C++ +E E+ +S +
Sbjct: 370 KNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVF 429
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN +++ LC +G+ A GV+ EM + G+ PD + YN L+ CCR D + A++++D+M
Sbjct: 430 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 489
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ G +L +++ LI S+ G ++ AL+ F +M G+APD YT L+ G C+ +
Sbjct: 490 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 549
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
A +V ++ + L +T + LC+ ++
Sbjct: 550 SEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKML 584
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/282 (18%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++IL L + ++ D + ++ + D + +I + N KA ++F E
Sbjct: 569 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLF-E 627
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ ++ P++ N+L+ ++ +++++M R + + I +G+ I +C
Sbjct: 628 MMIQ-RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNM 686
Query: 203 AKLGQVLSMLDEVRKRE--------NSMING-------------------------SVIA 229
+ + + DE+ ++ N+++ G +
Sbjct: 687 GCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITY 746
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+I+GF K + ++ AF +++++ PD I Y ++ F G + E E+++ K +
Sbjct: 747 NTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE 806
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
GV P + Y I G + + + EA + + ++ F DD
Sbjct: 807 RGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 848
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 213/494 (43%), Gaps = 29/494 (5%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y++++ ++ ++ +L+ + + LD Y ++ + KAF + +
Sbjct: 308 YNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMV 367
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
N N+LL S G ID+ALK++ M RGV + I + F + K
Sbjct: 368 RNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTE 427
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
Q L++ E R + V +I+G CK +R+ EA ++ ++ C D + YR
Sbjct: 428 QALNLWKETLAR--GLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRT 485
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ + + +G + + + LG P + FI GL + ++ + ++ + +
Sbjct: 486 LIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKG 545
Query: 327 FTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
+ + ALI G + A + + M+EKG P L S L + K DE
Sbjct: 546 LSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEAN 605
Query: 386 EVYKVLSANDYFTDMES--------------------------YNVMVSFLCTSGRLREA 419
V + L+ D D + +N+++ LC GR+ +A
Sbjct: 606 LVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADA 665
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ +++K KG PD Y+SL+ C + A L D+M ++ + N+ TYN LI
Sbjct: 666 RNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYG 725
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ + A+ LF+ + KG++P+A TY +L++G C++ N AF++ K + +
Sbjct: 726 LCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPT 785
Query: 540 RSILSTFMISLCRR 553
+ + LC +
Sbjct: 786 VFTYTILIHGLCTQ 799
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 164/376 (43%), Gaps = 10/376 (2%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL A G + +AL +FDEM G + + + + +G +++ ++R
Sbjct: 100 LLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRC-A 158
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
++ + +A++ +C+ RV A L E+ + +AY V + + +G
Sbjct: 159 GTLPDDFTVAIMA-KAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEV 217
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALI 338
+L + G++P Y + G E R+ EA K + E+ + K ID+ ALI
Sbjct: 218 ARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALI 277
Query: 339 -GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
G A + MI+ G + + + CK + + EV K+L AN+Y
Sbjct: 278 NGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGR---MGEVEKLLQANEYR 334
Query: 398 T---DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D SYN +V C G + +A+ M R G YN+L+ C + A
Sbjct: 335 GVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDA 394
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
KLW M G N + + L+ F + G+ E AL L+ L +G+A + T +++ G
Sbjct: 395 LKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVING 454
Query: 515 LCQETNLQAAFEVFNK 530
LC+ + A E+F++
Sbjct: 455 LCKNRRMTEAEELFHR 470
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 187/433 (43%), Gaps = 38/433 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++ ++++ L +R++ + + ++K DS YR +I + + +A +
Sbjct: 446 VTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRA----TQ 501
Query: 145 VKFNCEDIG----PEICNSLLAVL--ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
++ E++G E+ NS + L A N +++ EMS +G+ +T+ +G I
Sbjct: 502 IRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRV--EMSAKGLSPNTVTYGALIAG 559
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR----I 254
+C+ L + E+ E + I +++ F + +V+EA VL +L I
Sbjct: 560 WCKEGNLHDACILYFEMV--EKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMI 617
Query: 255 RECKPDFIAYRIVAEEFK-LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
++C + VA + L G + ++ + ILGL R+
Sbjct: 618 QDCSASTLNIGKVAHIIESLAGGNHQSAKIM--------------WNIVILGLCKLGRVA 663
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVS---SIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
+A+ L E + F D+ ++LI S SID A + M+ P + T ++
Sbjct: 664 DARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDL--AFGLRDEMLSARLTPNIVTYNS 721
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LCK V ++ L + + +YN ++ C G EA+ + Q+M ++G
Sbjct: 722 LIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEG 781
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+ P V Y L+ C + + A KL DQM + N TY LI ++ G ++
Sbjct: 782 IQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAIT 841
Query: 491 RLFHNMLEKGVAP 503
+L++ M G+ P
Sbjct: 842 KLYNEMHICGLLP 854
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 183/421 (43%), Gaps = 40/421 (9%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVK-FNCEDIGPEICNSLLAVLASDGY-----IDNALKMFD 178
+I L + + +A +F+ +K ++C C+SL DGY + A ++
Sbjct: 451 VINGLCKNRRMTEAEELFHRMKEWSCP------CDSLTYRTLIDGYCKLGDLGRATQIRI 504
Query: 179 EMSHRG----VE-FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLII 233
EM + G VE F++ G+FI K ++ K+ + + N++ G++IA
Sbjct: 505 EMENLGFVPSVEMFNSFITGLFIAK--QSGKVNDIRVEMSAKGLSPNTVTYGALIA---- 558
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
G+CK + +A + E+ + KP+ ++ F G V E +VL+K L
Sbjct: 559 -GWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQK---LADT 614
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI----DPRSA 349
D L I + + E + G + N +I + + D R+
Sbjct: 615 DMIQDCSASTL------NIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARN- 667
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F + KG +P T S+L D + + + ++ +YN ++
Sbjct: 668 --LFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYG 725
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC S + A + +++ KG+ P+ YN+L++ C++ A KL +M G
Sbjct: 726 LCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPT 785
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ TY ILI G +E A++L M+E V P+ TY +L++G + N++A +++N
Sbjct: 786 VFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYN 845
Query: 530 K 530
+
Sbjct: 846 E 846
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 102/232 (43%), Gaps = 3/232 (1%)
Query: 328 TIDDDVLNALIGSVSSIDPRSAIV--FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
T+ DD A++ D R A F M E G L + C+ +++
Sbjct: 160 TLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVAR 219
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR-KGLDPDVSFYNSLMEA 444
++ L ++ +Y ++V C GR+ EA V++E+K + + D Y +L+
Sbjct: 220 KLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALING 279
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C+ + A ++ D+M +G N+ YN +I+ + ++G + +L +GV D
Sbjct: 280 YCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLD 339
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+Y +L++G C++ + AFE + V + +T + C R I
Sbjct: 340 EYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAI 391
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 171/364 (46%), Gaps = 4/364 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++ L G ++ A + D+M G + + + I +C+ ++G++ D + K
Sbjct: 234 NTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKA-DAILK 292
Query: 218 R--ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
EN + SV ++I GFCK + + A KV +E++ + KP + Y + G
Sbjct: 293 EMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEG 352
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ E +V+L + + P Y I G ++ + EA+EL + I T + N
Sbjct: 353 KLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFN 412
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
L+ G A + M+EKG +P ST + L C+ K +E+ + +
Sbjct: 413 TLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCR 472
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D +YN+++S C ++A +I EM KGL P YN L+ C E LR A
Sbjct: 473 GVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAA 532
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
L QM G N+ TYN+LI + G++E A L + MLEKG+ P+ TTY + E
Sbjct: 533 LNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEE 592
Query: 515 LCQE 518
+ ++
Sbjct: 593 MMEK 596
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/526 (22%), Positives = 221/526 (42%), Gaps = 39/526 (7%)
Query: 38 LHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLS 97
LHQL + P LV R +FNW+ ++ N +S +L L+ +
Sbjct: 76 LHQLMGSGDVDPLLVLR---------------YFNWSRRELNVNYSIELICRLLNLLANA 120
Query: 98 RQINAIDSVLKQ------------------VKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
+ I S+L V + +S + ++ + ++ T
Sbjct: 121 KHYPKIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGL 180
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
F + CN LL+ L + ++ EM R + + I F I
Sbjct: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGL 240
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK---VLDELRIRE 256
C+ KL + ++D+++ V +I G+CK RV + +K +L E+ +
Sbjct: 241 CKVGKLNKAGDVVDDMKVW--GFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENK 298
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
P+ + + ++ + F ++ V ++ + G+ P Y + GL E ++ EAK
Sbjct: 299 VSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAK 358
Query: 317 ELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
L + ++S + NALI G A F+ + ++G P + T + L
Sbjct: 359 VLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGY 418
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
CK K +E + KV+ + + +YN ++ C G++ E ++ EM+ +G+ D
Sbjct: 419 CKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADT 478
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YN L+ A C + + A +L D+M G + TYNIL++ + G + AL L
Sbjct: 479 VTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQ 538
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
M ++G + TY L++G C++ L+ A + N+ + ++ R+
Sbjct: 539 MEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRT 584
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 164/365 (44%), Gaps = 10/365 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQ----GKNTQKAFS 140
+++++++ L ++N V+ +KV + Y +I + GK KA +
Sbjct: 231 ITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGK-MYKADA 289
Query: 141 VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+ E+ N N L+ D + ALK+F+EM +G++ + + + + C
Sbjct: 290 ILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLC 349
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
KL + +LDE+ +S + +VI +I+G+CK K +EEA ++ D + + P
Sbjct: 350 NEGKLNEAKVLLDEML---SSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTP 406
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
+ I + + + G + E ++ K + G P + Y I+G E ++ E K L
Sbjct: 407 NVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLL 466
Query: 320 EVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ D N LI + +P+ A + M++KG P+ T + L C
Sbjct: 467 NEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCME 526
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+ + K + + ++ +YNV++ C G+L +A G++ EM KGL P+ + Y
Sbjct: 527 GNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTY 586
Query: 439 NSLME 443
+ E
Sbjct: 587 EIIKE 591
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 3/196 (1%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVE---VYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
G P + T + L CK + ++ + + K + N + ++NV++ C L
Sbjct: 260 GFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENL 319
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
A V +EM+ +GL P V YNSL+ C E L AK L D+M +S N+ TYN L
Sbjct: 320 SAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNAL 379
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I+ + + +E A LF N+ ++G+ P+ T+ +LL G C+ ++ AF + +
Sbjct: 380 INGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGF 439
Query: 537 MLARSILSTFMISLCR 552
+ S + ++ CR
Sbjct: 440 LPNASTYNCLIVGFCR 455
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 114/505 (22%), Positives = 223/505 (44%), Gaps = 34/505 (6%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINA 102
R+ LS SLV V+ L+ S + FF WA +Q + H+ Y++++ +
Sbjct: 126 FREKLSESLVIEVLR--LIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKV 183
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDI----GPEICN 158
+ L+Q++ + D V+ + L++ +FS+ E +D N
Sbjct: 184 PEEFLQQIRDD----DKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYN 239
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
L+ +D+A + EMS + F + C+ K + L++++
Sbjct: 240 CLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET---- 295
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+ + +V +I G C+ EEA L+ +R C P+ + Y + L G +
Sbjct: 296 -ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTL-----LCGCLN 349
Query: 279 EREV-----VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
++++ VL G P + + A +L + +V V
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409
Query: 334 LNALIGSVSSIDPRS--------AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
N LIGS+ D S A ++ M+ G V +S+ ++ LC K ++
Sbjct: 410 YNILIGSICG-DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
V + + + D +Y+ ++++LC + ++ A+ + +EMKR GL DV Y ++++
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+ L+ A+K +++M GC+ N+ TY LI + + ++ A LF ML +G P+
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNK 530
TY++L++G C+ ++ A ++F +
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFER 613
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 155/385 (40%), Gaps = 21/385 (5%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
+S L S G + A + EM +G T + + C +K+ + +E+++
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ +++ FCK +E+A K +E+R C P+ + Y + + V
Sbjct: 512 --GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 569
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLI----VER------RICEAKELGEVIVSGKF 327
+ + G P Y I G VE+ R+C +K++ +V + K
Sbjct: 570 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK- 628
Query: 328 TIDDD-------VLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
DD+ AL+ G S A + M +G P L LCK
Sbjct: 629 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K DE EV +S + + + +Y+ ++ R A V+ +M P+V Y
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+++ C+ A KL M GC N+ TY +I F +G+IE L L M K
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Query: 500 GVAPDATTYTSLLEGLCQETNLQAA 524
GVAP+ TY L++ C+ L A
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVA 833
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 96/476 (20%), Positives = 202/476 (42%), Gaps = 33/476 (6%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +L L + ++ + +++K + D Y ++ S + ++A FNE+
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 146 KFNCEDIG--PEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ ++G P + +L+ + A ++F+ M G + + + I C+
Sbjct: 545 R----EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 202 NAKLGQVLSMLDEV--------------RKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
++ + + + + + +NS V ++ GFCK RVEEA K
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
+LD + + C+P+ I Y + + +G + E + V + + G Y I
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Query: 308 -VERRICEAKELGEVI---VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVP 363
V+R+ +K L +++ + I ++++ L V D A M EKG P
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC-KVGKTD--EAYKLMQMMEEKGCQP 777
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ T + + K + +E+ + + + + +Y V++ C +G L A+ ++
Sbjct: 778 NVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLL 837
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+EMK+ + Y ++E +E + + L D++ + L Y +LI +
Sbjct: 838 EEMKQTHWPTHTAGYRKVIEGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKA 895
Query: 484 GEIEGALRLFHNM--LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+E ALRL + + ++TY SL+E LC ++ AF++F++ V+
Sbjct: 896 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVI 951
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 145/383 (37%), Gaps = 55/383 (14%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D A K + EM GV + I F C K + S++ E+ + I +
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ--GFIPDTSTY 486
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+++ C ++E AF + +E++ D Y I+ + F G + + + R+
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSA 349
+G P Y I + +++ A EL
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANEL------------------------------- 575
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F M+ +G +P + T S L CK + ++ ++++ + + D++ Y
Sbjct: 576 ---FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY------ 626
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
++ P+V Y +L++ C+ + A+KL D M GC N
Sbjct: 627 -------------FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
Y+ LI +VG+++ A + M E G TY+SL++ + A +V +
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733
Query: 530 KSVNHDVMLARSILSTFMISLCR 552
K + + I + + LC+
Sbjct: 734 KMLENSCAPNVVIYTEMIDGLCK 756
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 158/378 (41%), Gaps = 17/378 (4%)
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
I + + S+ + +D KQ N + Y ++ + ++A + + +
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ + ++L+ L G +D A ++ EMS G + + I ++ + +
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+L ++ ENS VI +I G CK + +EA+K++ + + C+P+ + Y + +
Sbjct: 730 KVLSKML--ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
F ++G + +L++ GVAP YR I + A L E + +
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 847
Query: 330 DDDVLNALIGSVSSIDPRSAIVFFNFMIEKGR---VPTLSTLSNLSKNLCKRNKSD---E 383
+I + + I + E G+ P LS L NL K + +
Sbjct: 848 HTAGYRKVIEGFN----KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALR 903
Query: 384 LVEVYKVLSAN--DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
L+E SA DY + +YN ++ LC + ++ A+ + EM +KG+ P++ + SL
Sbjct: 904 LLEEVATFSATLVDYSS---TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSL 960
Query: 442 MEACCREDLLRPAKKLWD 459
++ R + A L D
Sbjct: 961 IKGLFRNSKISEALLLLD 978
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 3/189 (1%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P+ ST + L + K ++ D +++ +S + D + LC G+ REA +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
++ + PD FY L+ C L A ++M A+ C N+ TY+ L+
Sbjct: 293 VE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
++ R+ + M+ +G P + SL+ C + A+++ K V M +
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409
Query: 543 LSTFMISLC 551
+ + S+C
Sbjct: 410 YNILIGSIC 418
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 79/226 (34%), Gaps = 44/226 (19%)
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
TL + +LCK K E + ++ ++ D Y ++S LC + EA + M
Sbjct: 272 TLRCFAYSLCKVGKWREAL---TLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRM 328
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
+ P+V Y++L+ C + L K++ + M GC + K +N L+ + G+
Sbjct: 329 RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDH 388
Query: 487 EGALRL-----------------------------------------FHNMLEKGVAPDA 505
A +L + ML GV +
Sbjct: 389 SYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNK 448
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+S LC + AF V + + + S S + LC
Sbjct: 449 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 120 SVYRFIIPSLIQGKNTQKAFSVFNEVK-FNCEDIG-PEICNSLLAVLASDGYIDNALKMF 177
SVYR +I +LI+ + + A + EV F+ + NSL+ L ++ A ++F
Sbjct: 883 SVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLF 942
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
EM+ +GV F I N+K+ + L +LD + E
Sbjct: 943 SEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHME 984
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 188/401 (46%), Gaps = 9/401 (2%)
Query: 159 SLLAVLASDGYIDNALKMFDEM----SHRGVEF--STIGFGVFIWKFCENAKLGQVLSML 212
+L+ L G ++ ALK+ EM S GV I + + I C+ + + +
Sbjct: 201 TLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELF 260
Query: 213 DEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
+E++ + MI + +IHGFC + +++ + DE+ + +PD + + ++ +
Sbjct: 261 EEMKAQ--GMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLC 318
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
G V E + +L+ + G+ P Y I G + + A+EL + S D+
Sbjct: 319 KEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEI 378
Query: 333 VLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
LI G + + A+ +N M++ G+ P ++T L K L ++ K + +++ V+
Sbjct: 379 SYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVM 438
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+ + Y + + LC + L EA + E+K ++ Y+ L++ C+ L
Sbjct: 439 KTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKL 498
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A +L++++ G ++ TYNI+I F +VG+++ A LF M E G PD Y +L
Sbjct: 499 ETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTL 558
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L G C+ L+ ++ +K V DV + + + LC+
Sbjct: 559 LCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCK 599
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 214/459 (46%), Gaps = 21/459 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++K L + +I+ + +++ T ++ Y +I L Q N A + E
Sbjct: 162 VTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKE 221
Query: 145 VKFNCEDIG----PEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ + G P + + + L G D A ++F+EM +G+ I + I
Sbjct: 222 MLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHG 281
Query: 199 FCENAKLGQVLSMLDEVRKR--ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
FC K Q + DE+ + + M+ SV+ I CK +V EA K+L+ + R
Sbjct: 282 FCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVL----IDTLCKEGKVTEAKKLLEVMIQRG 337
Query: 257 CKPDFIAYRIVAEEFKLMGSV-FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
P+ I Y + + F ++G + RE+ L K G+ P Y I G ++ EA
Sbjct: 338 IVPNLITYNSLIDGFCMVGDLNSARELFLSMPSK-GLEPDEISYTTLINGYCKTWKVKEA 396
Query: 316 KEL-GEVIVSGK---FTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
L E++ GK T +L L D + F M G
Sbjct: 397 MNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKK---LFGVMKTYGVSANSQIYGIF 453
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
LCK + E +E++ L + ++ ++E+Y+ ++ LC +G+L A+ + +++ ++GL
Sbjct: 454 LDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGL 513
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
PDV YN ++ C+ + A L+++M +GC+ ++ YN L+ F E ++E ++
Sbjct: 514 QPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIK 573
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
L H M++K V+P+A + T +++ LC++ + ++ K
Sbjct: 574 LLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPK 612
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 140/306 (45%), Gaps = 7/306 (2%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
++ G K + F + +E+R+ PD I+A + V E + + G
Sbjct: 97 LLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRG 156
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAI 350
P Y I GL +E RI EA L + T + LI G + + A+
Sbjct: 157 YIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIAL 216
Query: 351 VFFNFMIEKGRV------PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
M+ P + T S + LCK + DE E+++ + A D+ SY+
Sbjct: 217 KLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYS 276
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
++ C +G+ ++ + EM +G+ PD+ ++ L++ C+E + AKKL + M
Sbjct: 277 TLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQR 336
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G NL TYN LI F VG++ A LF +M KG+ PD +YT+L+ G C+ ++ A
Sbjct: 337 GIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEA 396
Query: 525 FEVFNK 530
++N+
Sbjct: 397 MNLYNE 402
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
N G++++I A FF+ M+ +P +S+ + L L K N +L +Y +
Sbjct: 64 NCKTGNITAIQ---AFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLA 120
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D+ + +++ + LC R+ EA + + R+G P+V Y +L++ C E + A
Sbjct: 121 GLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEA 180
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML----EKGV--APDATTY 508
+L+ +M GC+ N TY LI + G + AL+L ML + GV P TY
Sbjct: 181 TRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITY 240
Query: 509 TSLLEGLCQETNLQAAFEVF 528
+ +++GLC+ A E+F
Sbjct: 241 SIIIDGLCKVGREDEAKELF 260
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 193/446 (43%), Gaps = 62/446 (13%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
+L+ L +G + A+ + D M G++ + I +G + C K+G +S L+ +RK
Sbjct: 183 TTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMC---KMGDTVSALNLLRK 239
Query: 218 REN-SMINGSVIA------VLIIHGFCKGKRVEEAFKVLDE-LRIRECKPDFIAYRIVAE 269
E S I +V+ +I+GFC R EA ++L E L ++ PD + Y +
Sbjct: 240 MEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALIN 299
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
F G FE E + + G+ P T Y I G + R+ A+ + ++ + +
Sbjct: 300 AFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 359
Query: 330 DDDVLNALI------------------------------------GSVSSIDPRSAIVFF 353
D N LI G D +A
Sbjct: 360 DIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLL 419
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA-----------NDYFTDMES 402
M+ G P + T + L LC K + +E++K + N D+++
Sbjct: 420 QEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQT 479
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN+++S L G+ EA + +EM +G+ PD YNS++ C++ L A +++D M
Sbjct: 480 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMG 539
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
+ S N+ T+ LI+ + + G ++ L LF M +G+ +A TY +L+ G + N+
Sbjct: 540 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNIN 599
Query: 523 AAFEVFNK----SVNHDVMLARSILS 544
A ++F + V D + R++L+
Sbjct: 600 GALDIFQEMMASGVYPDTITIRNMLT 625
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 189/449 (42%), Gaps = 62/449 (13%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ V+ G +D + + +M R V + F + + FC +KL LS ++ K
Sbjct: 84 LMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLG 143
Query: 220 NSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+ +V+ ++HG C R+ EA + ++ CKP+ + + + G V
Sbjct: 144 ---FHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVV 196
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLI-----------------------------VE 309
E +L + + G+ P Y + G+ +E
Sbjct: 197 EAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLE 256
Query: 310 RRIC------------EAKEL-GEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNF 355
RR C EA++L E++ K + D NALI + V A ++
Sbjct: 257 RRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDE 316
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M+ +G +P+ T S++ CK+N+ D ++ +++ D+ ++N +++ C + R
Sbjct: 317 MLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKR 376
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ + ++ EM GL + Y +L+ C+ L A+ L +M +SG N+ T N
Sbjct: 377 VDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNT 436
Query: 476 LISKFSEVGEIEGALRLFHNMLE-----------KGVAPDATTYTSLLEGLCQETNLQAA 524
L+ + G+++ AL +F M + GV PD TY L+ GL E A
Sbjct: 437 LLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEA 496
Query: 525 FEVFNKSVNHDVMLARSILSTFMISLCRR 553
E++ + + ++ ++ + LC++
Sbjct: 497 EELYEEMPHRGIVPDTITYNSVIHGLCKQ 525
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 102/233 (43%), Gaps = 13/233 (5%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++ +NA +L+++ + + + ++ L + A +F
Sbjct: 397 ITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKA 456
Query: 145 VK-----------FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
++ FN + + N L++ L ++G A ++++EM HRG+ TI +
Sbjct: 457 MQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYN 516
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
I C+ ++L + M D + + S V +I+G+CK RV++ ++ E+
Sbjct: 517 SVIHGLCKQSRLDEATQMFDSMGSK--SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMG 574
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
R + I Y + F+ +G++ + ++ GV P T R + GL
Sbjct: 575 RRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGL 627
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 128/508 (25%), Positives = 213/508 (41%), Gaps = 66/508 (12%)
Query: 50 SLVARVINPYLLTHHSLALGFFNWAS--------------QQPNFTHSPLSYHSILKSLS 95
++V + NP ++ L GFF + QP+ +Y++++
Sbjct: 114 TMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDV----FAYNALINGFC 169
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGP 154
+I+ VL +++ + D+ Y +I SL A V N++ NC+ P
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ---P 226
Query: 155 EICNSLLAVLAS--DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML 212
+ + + A+ +G +D ALK+ DEM RG++ +
Sbjct: 227 TVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT------------------ 268
Query: 213 DEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
II G CK V+ AF+++ L ++ +PD I+Y I+
Sbjct: 269 -------------------IIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALL 309
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
G E E ++ K P Y I L + +I EA L +++ T D
Sbjct: 310 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 369
Query: 333 VLNALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
+ LI + +D AI F MI G +P + + + LCK K+D+ +E++
Sbjct: 370 SYDPLIAAFCREGRLD--VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFG 427
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
L + SYN M S L +SG A +I EM G+DPD YNS++ CRE
Sbjct: 428 KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
++ A +L M + ++ TYNI++ F + IE A+ + +M+ G P+ TTYT
Sbjct: 488 MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVM 537
L+EG+ A E+ N V D +
Sbjct: 548 VLIEGIGFAGYRAEAMELANDLVRIDAI 575
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 149/322 (46%), Gaps = 2/322 (0%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I H C+ E+ +L+ + + PD I + + F + ++ + V++ K G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AI 350
P Y I G RI +A + + + S F+ D N +IGS+ S A+
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
N ++ PT+ T + L + DE +++ + + DM +YN ++ +
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C G + A+ +++ ++ KG +PDV YN L+ A + +KL +MF+ C N+
Sbjct: 274 CKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TY+ILI+ G+IE A+ L M EKG+ PDA +Y L+ C+E L A E
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 531 SVNHDVMLARSILSTFMISLCR 552
++ + +T + +LC+
Sbjct: 394 MISDGCLPDIVNYNTVLATLCK 415
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 168/337 (49%), Gaps = 23/337 (6%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER---EVVLKKKR 288
+I+GFCK R+++A +VLD +R ++ PD + Y I ++GS+ R ++ LK
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI------MIGSLCSRGKLDLALKVLN 217
Query: 289 KL---GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV--SS 343
+L P Y I ++E + EA +L + ++S D N +I +
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ R+ + N + KG P + + + L + L + K +E ++ + + ++ +Y
Sbjct: 278 MVDRAFEMVRNLEL-KGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+++++ LC G++ EA +++ MK KGL PD Y+ L+ A CRE L A + + M +
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN--- 520
GC ++ YN +++ + G+ + AL +F + E G +P++++Y ++ L +
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 521 -LQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
L E+ + ++ D + S++S LCR ++
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISC----LCREGMV 489
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 67/134 (50%)
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ E+ K PDV YN+L+ C+ + + A ++ D+M + S + TYNI+I
Sbjct: 146 VMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
G+++ AL++ + +L P TYT L+E E + A ++ ++ ++ +
Sbjct: 206 RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265
Query: 543 LSTFMISLCRRVLI 556
+T + +C+ ++
Sbjct: 266 YNTIIRGMCKEGMV 279
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/360 (16%), Positives = 148/360 (41%), Gaps = 15/360 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++++ L ++ ++ ++ + D Y II + + +AF +
Sbjct: 229 ITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRN 288
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ + P++ N LL L + G + K+ +M + + + + + I C +
Sbjct: 289 LELKGSE--PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRD 346
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
K+ + +++L ++ E + + +I FC+ R++ A + L+ + C PD +
Sbjct: 347 GKIEEAMNLLKLMK--EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 404
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y V G + + K ++G +P ++ Y L A + +
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRSAIV--FFNFMIEKGRV---PTLSTLSNLSKNLCK 377
+S D+ N++I + R +V F +++ P++ T + + CK
Sbjct: 465 MSNGIDPDEITYNSMISCLC----REGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCK 520
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
++ ++ + V + + N + +Y V++ + +G EA + ++ R + SF
Sbjct: 521 AHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSF 580
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 104/468 (22%), Positives = 209/468 (44%), Gaps = 52/468 (11%)
Query: 83 SPLSYHSILKSL-SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSV 141
+ ++Y +I+ + + ++A+D + K +++ I + +Y II SL + A ++
Sbjct: 218 TQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 142 FNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
F E++ + I P++ NS++ S G +A ++ EM R + + + I F
Sbjct: 278 FTEMQE--KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ K + + DE+ R +I ++ +I GFCK R++ A + + + C P
Sbjct: 336 VKEGKFFEAEELYDEMLPR--GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
+ I + + + + + + +L + + G+ T Y I G
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFY------------ 441
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
L+G D +A+ MI G P + T L LC
Sbjct: 442 -----------------LVG-----DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Query: 380 KSDELVEVYKVLSA-----------NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
K + +E++KV+ N D+++YN+++S L G+ EA + +EM
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
+G+ PD Y+S+++ C++ L A +++D M + S N+ T+ LI+ + + G ++
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
L LF M +G+ +A TY +L+ G + N+ A ++F + ++ V
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 168/383 (43%), Gaps = 4/383 (1%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D + ++ +M + + F + I FC +KL LS ++ K + V
Sbjct: 96 DLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKL--GLHPDVVTFN 153
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++HG C RV EA + ++ C+P+ + + + G + E +L + +
Sbjct: 154 TLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED 213
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL-NALIGSVSSIDPRS- 348
G+ P Y + G+ A +L + I + V+ +A+I S+ S
Sbjct: 214 GLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSD 273
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A F M EKG P L T +++ C + + ++ + + D+ +YN +++
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
G+ EA + EM +G+ P+ Y+S+++ C+++ L A+ ++ M GCS
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
NL T+N LI + I+ + L H M E G+ D TTY +L+ G +L AA ++
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 529 NKSVNHDVMLARSILSTFMISLC 551
+ ++ + T + LC
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLC 476
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 196/461 (42%), Gaps = 58/461 (12%)
Query: 111 KVNKITLDSSVYRF--IIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEICN--SLLAVLA 165
K+ K+ L V F ++ L +A ++F+++ + C P + +L+ L
Sbjct: 139 KITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCR---PNVVTFTTLMNGLC 195
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE--NSMI 223
+G I A+ + D M G++ + I +G + C K+G +S LD +RK E + +I
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC---KIGDTVSALDLLRKMEEISHII 252
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
VI II CK R +A + E++ + PD Y + F G + E +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
L++ + ++P Y I + E + EA+EL
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEEL------------------------- 347
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
++ M+ +G +P T S++ CK+N+ D ++ +++ ++ ++
Sbjct: 348 ---------YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N ++ C + R+ + ++ EM GL D + YN+L+ L A L +M +
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE-----------KGVAPDATTYTSLL 512
SG ++ T + L+ + G+++ AL +F M + GV PD TY L+
Sbjct: 459 SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILI 518
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
GL E A E++ + + ++ S+ + LC++
Sbjct: 519 SGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 187/407 (45%), Gaps = 21/407 (5%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN +L + G +D A+ + +++ G E + + + C + G V ++DE+
Sbjct: 184 CNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM- 242
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
R + N LI + C+ E +VL ++ C PD Y + + G
Sbjct: 243 VRVDCAPNIVTFNTLIGY-LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ +L + G+ P Y + GL R EA+EL + +DD N
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 337 LI------GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
L+ G V + I M+ G +P + T + + CK DE V + K
Sbjct: 362 LVDFFCQNGLVDRV-----IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+S+ + SY +++ LC++GR +A ++ +M ++G P+ +N+L+ C++ L
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ A +L QM +GCS +L +Y+ +I + G+ E AL L + M+ KG++P+ Y+S
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 511 LLEGLCQETNLQAAFEVFNK----SVNHDVMLARSILSTFMISLCRR 553
+ L +E + ++F+ ++ D +L +++S SLC+R
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVIS----SLCKR 579
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/473 (21%), Positives = 209/473 (44%), Gaps = 45/473 (9%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY+++LK L ++++ ++ ++ ++ + +D + +LI F +E
Sbjct: 217 VSYNAVLKGLCMAKRWGDVEELMDEM----VRVDCAPNIVTFNTLIGYLCRNGLFERVHE 272
Query: 145 VKFNCEDIG--PEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
V + G P+I +++ + +G+++ A ++ + M G++ + + + + C
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + +L E+ +++ + V +++ FC+ V+ ++L+++ C PD
Sbjct: 333 SAERWKEAEELLSEMFQKDCPL--DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPD 390
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
I Y V F G + E ++LK G P T Y + GL R +A+EL
Sbjct: 391 VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL-- 448
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ MI++G P T + L LCK+
Sbjct: 449 --------------------------------MSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
++ +E+ K + N D+ SY+ ++ L +G+ EA ++ M KG+ P+ Y+S
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+ A RE + +++D + + + YN +IS + E + A+ F M+ G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
P+ +TYT L++GL E + A E+ ++ + L + ++ F IS C +
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGA-LRKHLMRHFGISNCTQ 648
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 133/291 (45%), Gaps = 7/291 (2%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
++ G C R+ +A +VLDE+ + C P Y ++ E G VL+ G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSSIDPRSA 349
T + +L I E+ C + +G + F + D++ NA++ + + R
Sbjct: 177 CTLDTGNCN-LVLNAICEQG-CVDEAVGLLRKLAFFGCEADIVSYNAVLKGL-CMAKRWG 233
Query: 350 IV--FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
V + M+ P + T + L LC+ + + EV +S + D+ Y ++
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+C G L A ++ M GL P+V YN++++ C + + A++L +MF C
Sbjct: 294 DGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ T+NIL+ F + G ++ + L ML G PD TYT+++ G C+E
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 169/393 (43%), Gaps = 36/393 (9%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L + G I +AL++ DEMS +G + V + C + + +L+ + + ++
Sbjct: 121 LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLD 180
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
G+ L+++ C+ V+EA +L +L C+ D ++Y V + + + E +
Sbjct: 181 TGN--CNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEEL 238
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
+ + ++ AP + I G + +G F +VL
Sbjct: 239 MDEMVRVDCAPNIVTFNTLI---------------GYLCRNGLFERVHEVLAQ------- 276
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
M E G P + + + +CK + E+ + + ++ Y
Sbjct: 277 ------------MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N ++ LC++ R +EA ++ EM +K D +N L++ C+ L+ +L +QM +
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
GC ++ TY +I+ F + G I+ A+ L +M G P+ +YT +L+GLC
Sbjct: 385 HGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD 444
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
A E+ ++ + +T + LC++ L+
Sbjct: 445 AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%)
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+V LCT GR+ +A V+ EM KG P Y+ ++EA CR R + ++ + M A G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
C+ + N++++ E G ++ A+ L + G D +Y ++L+GLC
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCRRVL 555
E+ ++ V D +T + LCR L
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGL 266
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 85/224 (37%), Gaps = 35/224 (15%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P T + + LC R + + +EV +S Y+V++ C SG R + V
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY--------- 473
++ M KG D N ++ A C + + A L ++ GC ++ +Y
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 474 --------------------------NILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
N LI G E + M E G PD
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
Y ++++G+C+E +L+ A E+ N+ ++ + +T + LC
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 169/360 (46%), Gaps = 6/360 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL---SMLDE 214
N ++ L G ++ A + ++M RGV + I + I +C+ K+G++ ++L E
Sbjct: 167 NIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKE 226
Query: 215 VRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+R + + V ++I GFCK K V A KV E+ + KP+ + Y +
Sbjct: 227 MR--ADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNN 284
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G V E + + + P + + G + + +A EL + + T +
Sbjct: 285 GKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTY 344
Query: 335 NALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N LI + + A + M+ KG P +ST + L LC++ + + +
Sbjct: 345 NILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDT 404
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
D+ +YN+++ LC G +++A ++ EM RKGL P YN++++ C+E LR
Sbjct: 405 KHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRA 464
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A L QM G N+ TYN+LI F + ++E A L + MLEKG+ P+ TY + E
Sbjct: 465 ALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTE 524
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 183/379 (48%), Gaps = 8/379 (2%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN L++ L G I + ++ EM R +E + I F + I C+ KL + ++++++
Sbjct: 131 CNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMK 190
Query: 217 KRENSMINGSVIAV-LIIHGFCKGKRVEEAFK---VLDELRIRECKPDFIAYRIVAEEFK 272
R ++ +VI +I G+CK ++ + +K +L E+R P+ + + I+ + F
Sbjct: 191 VRG---VSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFC 247
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
+V V + + GV P Y I GL ++ EA L + +V+ +
Sbjct: 248 KDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNII 307
Query: 333 VLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
NAL+ G + + A F+ M ++G P ++T + L CK ++ +Y+++
Sbjct: 308 THNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIM 367
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
D+ +YN +++ LC G L A ++ EM K L D+ YN L+++ C + +
Sbjct: 368 LGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEM 427
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
+ A +L D+M G + TYN +I + + G + AL L M + G + TY L
Sbjct: 428 KKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVL 487
Query: 512 LEGLCQETNLQAAFEVFNK 530
++G C++ L+ A + N+
Sbjct: 488 IKGFCKKDKLEDANGLLNE 506
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 98/198 (49%), Gaps = 3/198 (1%)
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVE---VYKVLSANDYFTDMESYNVMVSFLCTSGR 415
+G + T + L CK K ++ + + K + A+ + ++N+++ C
Sbjct: 192 RGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKN 251
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ A V EM R+G+ P+V YNSL+ C + A L DQM S N+ T+N
Sbjct: 252 VSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNA 311
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
L++ F + ++ A LF +M ++G+ P+ TTY L++ C++ N++ AF ++ +
Sbjct: 312 LLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKG 371
Query: 536 VMLARSILSTFMISLCRR 553
V S + + LCR+
Sbjct: 372 VCPDVSTYNCLIAGLCRK 389
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 21/256 (8%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGF------------FNWASQQ---PNFTHSPLSYHSI 90
+L +V + P ++TH++L GF F+ +Q PN T +Y+ +
Sbjct: 292 ALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVT----TYNIL 347
Query: 91 LKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCE 150
+ + + ++ + + + D S Y +I L + + + A ++ +E+
Sbjct: 348 IDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHL 407
Query: 151 DIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS 210
N L+ L + G + AL++ DEM +G++ S + + I +C+ L L+
Sbjct: 408 KADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALN 467
Query: 211 MLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
+ ++ K + N + VLI GFCK ++E+A +L+E+ + P+ + Y IV EE
Sbjct: 468 LRSQMEKV-GRLANVATYNVLI-KGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEE 525
Query: 271 FKLMGSVFEREVVLKK 286
G V + E L K
Sbjct: 526 MMEKGFVPDIEGHLYK 541
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 49/103 (47%)
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
R R + + GL V+ N LM + + + ++ +M L ++N
Sbjct: 108 RTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFN 167
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
I+I+ +VG++ A + +M +GV+ + TY +L++G C+
Sbjct: 168 IVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCK 210
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 207/459 (45%), Gaps = 13/459 (2%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
QPN +++++++ L + +I + + ++ + Y +I L + +T
Sbjct: 134 HQPNIA----TFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGST 189
Query: 136 QKAFSVFNEV-KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
A + + + NC+ P++ S++ L D + A +F EM H+G+ S +
Sbjct: 190 SAAIRLLRSMEQGNCQ---PDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTY 246
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
I C + V ++L+E+ + ++ VI ++ CK +V EA V+D +
Sbjct: 247 NSLIHALCNLCEWKHVTALLNEMVNSK--IMPNVVIFSTVVDALCKEGKVMEAHDVVDMM 304
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
R +P+ + Y + + L + E V G AP Y I G +RI
Sbjct: 305 IKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRI 364
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNL 371
+A L E + + + + L+ + + + AI F+ M+ +G++P + L
Sbjct: 365 EKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCIL 424
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
LCK + DE + + K + ++ D++ Y +++ +C +G L A + + KGL
Sbjct: 425 LDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGL 484
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
P+V Y ++ C++ LL A KL+ +M G S N TYN++ F E ++
Sbjct: 485 HPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQ 544
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
L ML +G + D +T T L+E L + Q+ ++ ++
Sbjct: 545 LLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSE 583
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 169/365 (46%), Gaps = 5/365 (1%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D+AL F+ M H S F + + VLS+ ++ ++ I ++
Sbjct: 49 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM---DSFGIPPNIYT 105
Query: 230 V-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+ ++I+ FC +R+ AF VL ++ +P+ + + + G + E + K
Sbjct: 106 LNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMI 165
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPR 347
G P Y I GL A L + G D V ++I S+
Sbjct: 166 GEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVT 225
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A F+ MI +G P++ T ++L LC + + + + + ++ ++ +V
Sbjct: 226 QAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVV 285
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
LC G++ EA+ V+ M ++G++P+V YN+LM+ C + A K++D M G +
Sbjct: 286 DALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFA 345
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
++ +Y+ LI+ + ++ IE A+ LF M K + P+ TY++L+ GLC LQ A +
Sbjct: 346 PDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIAL 405
Query: 528 FNKSV 532
F++ V
Sbjct: 406 FHEMV 410
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 156/372 (41%), Gaps = 7/372 (1%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL + + L + +M G+ + + I FC +LG S+L ++ K
Sbjct: 74 LLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLG 133
Query: 220 NSMINGSVIAVL--IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ IA +I G C ++ E + D++ +P+ + Y + +GS
Sbjct: 134 HQ----PNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGST 189
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+L+ + P Y I L +R++ +A L ++ + N+L
Sbjct: 190 SAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSL 249
Query: 338 IGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I ++ ++ + + N M+ +P + S + LCK K E +V ++
Sbjct: 250 IHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGV 309
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ +YN ++ C + EA V M KG PDV Y++L+ C+ + A
Sbjct: 310 EPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMY 369
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L+++M N TY+ L+ VG ++ A+ LFH M+ +G PD +Y LL+ LC
Sbjct: 370 LFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLC 429
Query: 517 QETNLQAAFEVF 528
+ L A +
Sbjct: 430 KNRRLDEAIALL 441
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 125/271 (46%), Gaps = 1/271 (0%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
VL K KLG P + I GL VE +I E L + ++ F + LI +
Sbjct: 125 VLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLC 184
Query: 343 SIDPRSAIVFFNFMIEKGRV-PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ SA + +E+G P + +++ +LCK + + ++ + +
Sbjct: 185 KVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIF 244
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN ++ LC + ++ EM + P+V ++++++A C+E + A + D M
Sbjct: 245 TYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMM 304
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G N+ TYN L+ E++ A+++F M+ KG APD +Y++L+ G C+ +
Sbjct: 305 IKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRI 364
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ A +F + +++ ST M LC
Sbjct: 365 EKAMYLFEEMCRKELIPNTVTYSTLMHGLCH 395
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 103/203 (50%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ FN M+ P+++ + L ++ K ++ + + + ++ + N++++
Sbjct: 52 ALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILIN 111
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C RL A+ V+ ++ + G P+++ +N+L+ C E + L+D+M G
Sbjct: 112 SFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQP 171
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ TY LI+ +VG A+RL +M + PD YTS+++ LC++ + AF +F
Sbjct: 172 NVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLF 231
Query: 529 NKSVNHDVMLARSILSTFMISLC 551
++ ++ + + ++ + +LC
Sbjct: 232 SEMIHQGISPSIFTYNSLIHALC 254
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 56/137 (40%)
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L +A M P ++ + L+ + + L QM + G N+ T NI
Sbjct: 49 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI+ F + + A + +L+ G P+ T+ +L+ GLC E + +F+K +
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168
Query: 536 VMLARSILSTFMISLCR 552
T + LC+
Sbjct: 169 FQPNVVTYGTLINGLCK 185
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 187/407 (45%), Gaps = 21/407 (5%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN +L + G +D A+ + +++ G E + + + C + G V ++DE+
Sbjct: 184 CNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM- 242
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
R + N LI + C+ E +VL ++ C PD Y + + G
Sbjct: 243 VRVDCAPNIVTFNTLIGY-LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ +L + G+ P Y + GL R EA+EL + +DD N
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 337 LI------GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
L+ G V + I M+ G +P + T + + CK DE V + K
Sbjct: 362 LVDFFCQNGLVDRV-----IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+S+ + SY +++ LC++GR +A ++ +M ++G P+ +N+L+ C++ L
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ A +L QM +GCS +L +Y+ +I + G+ E AL L + M+ KG++P+ Y+S
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 511 LLEGLCQETNLQAAFEVFNK----SVNHDVMLARSILSTFMISLCRR 553
+ L +E + ++F+ ++ D +L +++S SLC+R
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVIS----SLCKR 579
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 199/450 (44%), Gaps = 44/450 (9%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY+++LK L ++++ ++ ++ ++ + +D + +LI F +E
Sbjct: 217 VSYNAVLKGLCMAKRWGDVEELMDEM----VRVDCAPNIVTFNTLIGYLCRNGLFERVHE 272
Query: 145 VKFNCEDIG--PEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
V + G P+I +++ + +G+++ A ++ + M G++ + + + + C
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + +L E+ +++ + V +++ FC+ V+ ++L+++ C PD
Sbjct: 333 SAERWKEAEELLSEMFQKDCPL--DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPD 390
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
I Y V F G + E ++LK G P T Y + GL R +A+EL
Sbjct: 391 VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL-- 448
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ MI++G P T + L LCK+
Sbjct: 449 --------------------------------MSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
++ +E+ K + N D+ SY+ ++ L +G+ EA ++ M KG+ P+ Y+S
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+ A RE + +++D + + + YN +IS + E + A+ F M+ G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
P+ +TYT L++GL E + A E+ ++
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSE 626
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 133/291 (45%), Gaps = 7/291 (2%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
++ G C R+ +A +VLDE+ + C P Y ++ E G VL+ G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSSIDPRSA 349
T + +L I E+ C + +G + F + D++ NA++ + + R
Sbjct: 177 CTLDTGNCN-LVLNAICEQG-CVDEAVGLLRKLAFFGCEADIVSYNAVLKGL-CMAKRWG 233
Query: 350 IV--FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
V + M+ P + T + L LC+ + + EV +S + D+ Y ++
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+C G L A ++ M GL P+V YN++++ C + + A++L +MF C
Sbjct: 294 DGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ T+NIL+ F + G ++ + L ML G PD TYT+++ G C+E
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 169/393 (43%), Gaps = 36/393 (9%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L + G I +AL++ DEMS +G + V + C + + +L+ + + ++
Sbjct: 121 LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLD 180
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
G+ L+++ C+ V+EA +L +L C+ D ++Y V + + + E +
Sbjct: 181 TGN--CNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEEL 238
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
+ + ++ AP + I G + +G F +VL
Sbjct: 239 MDEMVRVDCAPNIVTFNTLI---------------GYLCRNGLFERVHEVLAQ------- 276
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
M E G P + + + +CK + E+ + + ++ Y
Sbjct: 277 ------------MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N ++ LC++ R +EA ++ EM +K D +N L++ C+ L+ +L +QM +
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
GC ++ TY +I+ F + G I+ A+ L +M G P+ +YT +L+GLC
Sbjct: 385 HGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD 444
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
A E+ ++ + +T + LC++ L+
Sbjct: 445 AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%)
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+V LCT GR+ +A V+ EM KG P Y+ ++EA CR R + ++ + M A G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
C+ + N++++ E G ++ A+ L + G D +Y ++L+GLC
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCRRVL 555
E+ ++ V D +T + LCR L
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGL 266
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 85/224 (37%), Gaps = 35/224 (15%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P T + + LC R + + +EV +S Y+V++ C SG R + V
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY--------- 473
++ M KG D N ++ A C + + A L ++ GC ++ +Y
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 474 --------------------------NILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
N LI G E + M E G PD
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
Y ++++G+C+E +L+ A E+ N+ ++ + +T + LC
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 187/407 (45%), Gaps = 21/407 (5%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN +L + G +D A+ + +++ G E + + + C + G V ++DE+
Sbjct: 184 CNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM- 242
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
R + N LI + C+ E +VL ++ C PD Y + + G
Sbjct: 243 VRVDCAPNIVTFNTLIGY-LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGH 301
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ +L + G+ P Y + GL R EA+EL + +DD N
Sbjct: 302 LEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI 361
Query: 337 LI------GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
L+ G V + I M+ G +P + T + + CK DE V + K
Sbjct: 362 LVDFFCQNGLVDRV-----IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+S+ + SY +++ LC++GR +A ++ +M ++G P+ +N+L+ C++ L
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ A +L QM +GCS +L +Y+ +I + G+ E AL L + M+ KG++P+ Y+S
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 511 LLEGLCQETNLQAAFEVFNK----SVNHDVMLARSILSTFMISLCRR 553
+ L +E + ++F+ ++ D +L +++S SLC+R
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVIS----SLCKR 579
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 199/450 (44%), Gaps = 44/450 (9%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY+++LK L ++++ ++ ++ ++ + +D + +LI F +E
Sbjct: 217 VSYNAVLKGLCMAKRWGDVEELMDEM----VRVDCAPNIVTFNTLIGYLCRNGLFERVHE 272
Query: 145 VKFNCEDIG--PEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
V + G P+I +++ + +G+++ A ++ + M G++ + + + + C
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + +L E+ +++ + V +++ FC+ V+ ++L+++ C PD
Sbjct: 333 SAERWKEAEELLSEMFQKDCPL--DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPD 390
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
I Y V F G + E ++LK G P T Y + GL R +A+EL
Sbjct: 391 VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL-- 448
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ MI++G P T + L LCK+
Sbjct: 449 --------------------------------MSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
++ +E+ K + N D+ SY+ ++ L +G+ EA ++ M KG+ P+ Y+S
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+ A RE + +++D + + + YN +IS + E + A+ F M+ G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
P+ +TYT L++GL E + A E+ ++
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSE 626
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 133/291 (45%), Gaps = 7/291 (2%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
++ G C R+ +A +VLDE+ + C P Y ++ E G VL+ G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSSIDPRSA 349
T + +L I E+ C + +G + F + D++ NA++ + + R
Sbjct: 177 CTLDTGNCN-LVLNAICEQG-CVDEAVGLLRKLAFFGCEADIVSYNAVLKGL-CMAKRWG 233
Query: 350 IV--FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
V + M+ P + T + L LC+ + + EV +S + D+ Y ++
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+C G L A ++ M GL P+V YN++++ C + + A++L +MF C
Sbjct: 294 DGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ T+NIL+ F + G ++ + L ML G PD TYT+++ G C+E
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 169/393 (43%), Gaps = 36/393 (9%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L + G I +AL++ DEMS +G + V + C + + +L+ + + ++
Sbjct: 121 LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLD 180
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
G+ L+++ C+ V+EA +L +L C+ D ++Y V + + + E +
Sbjct: 181 TGN--CNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEEL 238
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
+ + ++ AP + I G + +G F +VL
Sbjct: 239 MDEMVRVDCAPNIVTFNTLI---------------GYLCRNGLFERVHEVLAQ------- 276
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
M E G P + + + +CK + E+ + + ++ Y
Sbjct: 277 ------------MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N ++ LC++ R +EA ++ EM +K D +N L++ C+ L+ +L +QM +
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
GC ++ TY +I+ F + G I+ A+ L +M G P+ +YT +L+GLC
Sbjct: 385 HGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVD 444
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
A E+ ++ + +T + LC++ L+
Sbjct: 445 AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%)
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+V LCT GR+ +A V+ EM KG P Y+ ++EA CR R + ++ + M A G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
C+ + N++++ E G ++ A+ L + G D +Y ++L+GLC
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCRRVL 555
E+ ++ V D +T + LCR L
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGL 266
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 85/224 (37%), Gaps = 35/224 (15%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P T + + LC R + + +EV +S Y+V++ C SG R + V
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY--------- 473
++ M KG D N ++ A C + + A L ++ GC ++ +Y
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 474 --------------------------NILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
N LI G E + M E G PD
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
Y ++++G+C+E +L+ A E+ N+ ++ + +T + LC
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332
>gi|224136033|ref|XP_002327364.1| predicted protein [Populus trichocarpa]
gi|222835734|gb|EEE74169.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 135/540 (25%), Positives = 246/540 (45%), Gaps = 83/540 (15%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWA-SQQPNFTHSPLSYHSILKSLS---LSRQIN 101
SL+P+ + ++ L SLAL FF++ S PNF H +Y I+ LS L + +
Sbjct: 104 SLTPNEASEILKS--LNSPSLALRFFHFCPSLSPNFHHDCFTYSRIILILSKSNLPDRFH 161
Query: 102 AIDSVLKQVKVNKIT--------------------------------LDSSVYRFIIPSL 129
S++ +++ N + + Y+ ++ +
Sbjct: 162 LARSIVSEMERNGVRGSISTVNILIGFYENSEDLQKCIGLIKKWGLRMTGYTYKCLVQAY 221
Query: 130 IQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
++ +NT+K F+V+ E+K + N LL L D +D+A K+F++M + E
Sbjct: 222 LRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDALVKDSEVDHAYKVFEDMKRKHCEPDE 281
Query: 190 IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKV 248
+ + I + K + L + +E+ N + +VIA +I + V++A +
Sbjct: 282 YTYTIMIRMTGKIGKPDESLELFEEML---NKGYSPNVIAYNTMIQALANARMVDKAILL 338
Query: 249 LDELRIRECKPDFIAYRIV----AEEFKL--MGSVFE-------REV---VLKKKRKLGV 292
++ +EC+P Y ++ A E KL + V E R + +++ +KLG
Sbjct: 339 FLKMVEKECRPSEFTYSVILHLLATERKLHKLDEVVEVSKKYMSRSIYAYLVRTLKKLGH 398
Query: 293 APRTNDYREFILGLIVERR------------ICEAKELGEVI-VSGKF-----TIDDDVL 334
A + +R F R +C A + E I + GK ++D +
Sbjct: 399 A--SEAHRLFCNMWNCHERGDRDACVSMLECLCSAGKTTEAIDLLGKIHEKGVSVDTVMY 456
Query: 335 NAL---IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
N + +G + I P + + M + G +P T + L + + K DE +++++ L
Sbjct: 457 NTVFSALGKLKQISPLHDL--YEKMKQDGPLPDTFTYNILISSFGRAGKVDEAIKIFEEL 514
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+DY D SYN +++ L +G L EA+ +EM KGL+PDV Y++L+E + D +
Sbjct: 515 EDSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKEMCEKGLNPDVVTYSTLIECFGKTDKV 574
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A +L+D+M A GC N+ TYNIL+ G A+ L+ + ++G+ PD+ TY+ L
Sbjct: 575 EMACRLFDEMLAEGCYPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLIPDSITYSVL 634
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 114/505 (22%), Positives = 223/505 (44%), Gaps = 34/505 (6%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINA 102
R+ LS SLV V+ L+ S + FF WA +Q + H+ Y++++ +
Sbjct: 126 FREKLSESLVIEVLR--LIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKV 183
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDI----GPEICN 158
+ L+Q++ + D V+ + L++ +FS+ E +D N
Sbjct: 184 PEEFLQQIRDD----DKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYN 239
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
L+ +D+A + EMS + F + C+ K + L++++
Sbjct: 240 CLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET---- 295
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+ + +V +I G C+ EEA L+ +R C P+ + Y + L G +
Sbjct: 296 -ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTL-----LCGCLN 349
Query: 279 EREV-----VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
++++ VL G P + + A +L + +V V
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409
Query: 334 LNALIGSVSSIDPRS--------AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
N LIGS+ D S A ++ M+ G V +S+ ++ LC K ++
Sbjct: 410 YNILIGSICG-DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
V + + + D +Y+ ++++LC + ++ A+ + +EMKR GL DV Y ++++
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+ L+ A+K +++M GC+ N+ TY LI + + ++ A LF ML +G P+
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNK 530
TY++L++G C+ ++ A ++F +
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFER 613
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 155/385 (40%), Gaps = 21/385 (5%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
+S L S G + A + EM +G T + + C +K+ + +E+++
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ +++ FCK +E+A K +E+R C P+ + Y + + V
Sbjct: 512 --GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 569
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLI----VER------RICEAKELGEVIVSGKF 327
+ + G P Y I G VE+ R+C +K++ +V + K
Sbjct: 570 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK- 628
Query: 328 TIDDD-------VLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
DD+ AL+ G S A + M +G P L LCK
Sbjct: 629 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K DE EV +S + + + +Y+ ++ R A V+ +M P+V Y
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+++ C+ A KL M GC N+ TY +I F +G+IE L L M K
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Query: 500 GVAPDATTYTSLLEGLCQETNLQAA 524
GVAP+ TY L++ C+ L A
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVA 833
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 96/476 (20%), Positives = 202/476 (42%), Gaps = 33/476 (6%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +L L + ++ + +++K + D Y ++ S + ++A FNE+
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 146 KFNCEDIG--PEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ ++G P + +L+ + A ++F+ M G + + + I C+
Sbjct: 545 R----EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 202 NAKLGQVLSMLDEV--------------RKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
++ + + + + + +NS V ++ GFCK RVEEA K
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
+LD + + C+P+ I Y + + +G + E + V + + G Y I
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Query: 308 -VERRICEAKELGEVI---VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVP 363
V+R+ +K L +++ + I ++++ L V D A M EKG P
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC-KVGKTD--EAYKLMQMMEEKGCQP 777
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ T + + K + +E+ + + + + +Y V++ C +G L A+ ++
Sbjct: 778 NVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLL 837
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+EMK+ + Y ++E +E + + L D++ + L Y +LI +
Sbjct: 838 EEMKQTHWPTHTAGYRKVIEGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKA 895
Query: 484 GEIEGALRLFHNM--LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+E ALRL + + ++TY SL+E LC ++ AF++F++ V+
Sbjct: 896 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVI 951
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 145/383 (37%), Gaps = 55/383 (14%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D A K + EM GV + I F C K + S++ E+ + I +
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ--GFIPDTSTY 486
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+++ C ++E AF + +E++ D Y I+ + F G + + + R+
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSA 349
+G P Y I + +++ A EL
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANEL------------------------------- 575
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F M+ +G +P + T S L CK + ++ ++++ + + D++ Y
Sbjct: 576 ---FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY------ 626
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
++ P+V Y +L++ C+ + A+KL D M GC N
Sbjct: 627 -------------FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
Y+ LI +VG+++ A + M E G TY+SL++ + A +V +
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733
Query: 530 KSVNHDVMLARSILSTFMISLCR 552
K + + I + + LC+
Sbjct: 734 KMLENSCAPNVVIYTEMIDGLCK 756
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 158/378 (41%), Gaps = 17/378 (4%)
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
I + + S+ + +D KQ N + Y ++ + ++A + + +
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ + ++L+ L G +D A ++ EMS G + + I ++ + +
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+L ++ ENS VI +I G CK + +EA+K++ + + C+P+ + Y + +
Sbjct: 730 KVLSKML--ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
F ++G + +L++ GVAP YR I + A L E + +
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 847
Query: 330 DDDVLNALIGSVSSIDPRSAIVFFNFMIEKGR---VPTLSTLSNLSKNLCKRNKSD---E 383
+I + + I + E G+ P LS L NL K + +
Sbjct: 848 HTAGYRKVIEGFN----KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALR 903
Query: 384 LVEVYKVLSAN--DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
L+E SA DY + +YN ++ LC + ++ A+ + EM +KG+ P++ + SL
Sbjct: 904 LLEEVATFSATLVDYSS---TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSL 960
Query: 442 MEACCREDLLRPAKKLWD 459
++ R + A L D
Sbjct: 961 IKGLFRNSKISEALLLLD 978
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 3/189 (1%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P+ ST + L + K ++ D +++ +S + D + LC G+ REA +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
++ + PD FY L+ C L A ++M A+ C N+ TY+ L+
Sbjct: 293 VET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
++ R+ + M+ +G P + SL+ C + A+++ K V M +
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409
Query: 543 LSTFMISLC 551
+ + S+C
Sbjct: 410 YNILIGSIC 418
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 79/226 (34%), Gaps = 44/226 (19%)
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
TL + +LCK K E + ++ ++ D Y ++S LC + EA + M
Sbjct: 272 TLRCFAYSLCKVGKWREAL---TLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRM 328
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
+ P+V Y++L+ C + L K++ + M GC + K +N L+ + G+
Sbjct: 329 RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDH 388
Query: 487 EGALRL-----------------------------------------FHNMLEKGVAPDA 505
A +L + ML GV +
Sbjct: 389 SYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNK 448
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+S LC + AF V + + + S S + LC
Sbjct: 449 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 207/460 (45%), Gaps = 13/460 (2%)
Query: 75 SQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN 134
QPN +++++++ L + +I + + ++ + Y +I L + +
Sbjct: 124 GHQPNIA----TFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGS 179
Query: 135 TQKAFSVFNEV-KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
T A + + + NC+ P++ S++ L D + A +F EM H+G+ S
Sbjct: 180 TSAAIRLLRSMEQGNCQ---PDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ I C + V ++L+E+ + ++ VI ++ CK +V EA V+D
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSK--IMPNVVIFSTVVDALCKEGKVMEAHDVVDM 294
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ R +P+ + Y + + L + E V G AP Y I G +R
Sbjct: 295 MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQR 354
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSN 370
I +A L E + + + + L+ + + + AI F+ M+ +G++P +
Sbjct: 355 IEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCI 414
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LCK + DE + + K + ++ D++ Y +++ +C +G L A + + KG
Sbjct: 415 LLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG 474
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L P+V Y ++ C++ LL A KL+ +M G S N TYN++ F E +
Sbjct: 475 LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGI 534
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+L ML +G + D +T T L+E L + Q+ ++ ++
Sbjct: 535 QLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSE 574
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 168/365 (46%), Gaps = 5/365 (1%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D+AL F+ M H S F + + VLS+ + ++ I ++
Sbjct: 40 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSL---SHQMDSFGIPPNIYT 96
Query: 230 V-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+ ++I+ FC +R+ AF VL ++ +P+ + + + G + E + K
Sbjct: 97 LNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMI 156
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPR 347
G P Y I GL A L + G D V ++I S+
Sbjct: 157 GEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVT 216
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A F+ MI +G P++ T ++L LC + + + + + ++ ++ +V
Sbjct: 217 QAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVV 276
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
LC G++ EA+ V+ M ++G++P+V YN+LM+ C + A K++D M G +
Sbjct: 277 DALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFA 336
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
++ +Y+ LI+ + ++ IE A+ LF M K + P+ TY++L+ GLC LQ A +
Sbjct: 337 PDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIAL 396
Query: 528 FNKSV 532
F++ V
Sbjct: 397 FHEMV 401
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 156/372 (41%), Gaps = 7/372 (1%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL + + L + +M G+ + + I FC +LG S+L ++ K
Sbjct: 65 LLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLG 124
Query: 220 NSMINGSVIAVL--IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ IA +I G C ++ E + D++ +P+ + Y + +GS
Sbjct: 125 HQ----PNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGST 180
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+L+ + P Y I L +R++ +A L ++ + N+L
Sbjct: 181 SAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSL 240
Query: 338 IGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I ++ ++ + + N M+ +P + S + LCK K E +V ++
Sbjct: 241 IHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGV 300
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ +YN ++ C + EA V M KG PDV Y++L+ C+ + A
Sbjct: 301 EPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMY 360
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L+++M N TY+ L+ VG ++ A+ LFH M+ +G PD +Y LL+ LC
Sbjct: 361 LFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLC 420
Query: 517 QETNLQAAFEVF 528
+ L A +
Sbjct: 421 KNRRLDEAIALL 432
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 125/271 (46%), Gaps = 1/271 (0%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
VL K KLG P + I GL VE +I E L + ++ F + LI +
Sbjct: 116 VLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLC 175
Query: 343 SIDPRSAIVFFNFMIEKGRV-PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ SA + +E+G P + +++ +LCK + + ++ + +
Sbjct: 176 KVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIF 235
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN ++ LC + ++ EM + P+V ++++++A C+E + A + D M
Sbjct: 236 TYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMM 295
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G N+ TYN L+ E++ A+++F M+ KG APD +Y++L+ G C+ +
Sbjct: 296 IKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRI 355
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ A +F + +++ ST M LC
Sbjct: 356 EKAMYLFEEMCRKELIPNTVTYSTLMHGLCH 386
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 103/203 (50%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ FN M+ P+++ + L ++ K ++ + + + ++ + N++++
Sbjct: 43 ALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILIN 102
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C RL A+ V+ ++ + G P+++ +N+L+ C E + L+D+M G
Sbjct: 103 SFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQP 162
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ TY LI+ +VG A+RL +M + PD YTS+++ LC++ + AF +F
Sbjct: 163 NVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLF 222
Query: 529 NKSVNHDVMLARSILSTFMISLC 551
++ ++ + + ++ + +LC
Sbjct: 223 SEMIHQGISPSIFTYNSLIHALC 245
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 56/137 (40%)
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L +A M P ++ + L+ + + L QM + G N+ T NI
Sbjct: 40 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI+ F + + A + +L+ G P+ T+ +L+ GLC E + +F+K +
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159
Query: 536 VMLARSILSTFMISLCR 552
T + LC+
Sbjct: 160 FQPNVVTYGTLINGLCK 176
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/506 (22%), Positives = 224/506 (44%), Gaps = 36/506 (7%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINA 102
R+ LS SLV V+ L+ S + FF WA +Q + H+ Y++++ +
Sbjct: 85 FREKLSESLVIEVLR--LIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKV 142
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDI----GPEICN 158
+ L+Q++ + D V+ + L++ +FS+ E +D N
Sbjct: 143 PEEFLQQIRDD----DKEVFGQFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYN 198
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
L+ +D+A + EMS + F + C+ K + L++++
Sbjct: 199 CLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET---- 254
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+ + +V +I G C+ EEA L+ +R C P+ + Y + L G +
Sbjct: 255 -ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTL-----LCGCLN 308
Query: 279 EREV-----VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
++++ VL G P + + A +L + +V V
Sbjct: 309 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 368
Query: 334 LNALIGSVSSIDPRSAIVF---------FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
N LIGS+ + ++ F ++ M+ G V +S+ ++ LC K ++
Sbjct: 369 YNILIGSICG--DKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 426
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
V + + + D +Y+ ++++LC + ++ A+ + +EMKR GL DV Y ++++
Sbjct: 427 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 486
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C+ L+ A+K +++M GC+ N+ TY LI + + ++ A LF ML +G P+
Sbjct: 487 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 546
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNK 530
TY++L++G C+ ++ A ++F +
Sbjct: 547 IVTYSALIDGHCKAGQVEKACQIFER 572
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 155/385 (40%), Gaps = 21/385 (5%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
+S L S G + A + EM +G T + + C +K+ + +E+++
Sbjct: 411 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 470
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ +++ FCK +E+A K +E+R C P+ + Y + + V
Sbjct: 471 --GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 528
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLI----VER------RICEAKELGEVIVSGKF 327
+ + G P Y I G VE+ R+C +K++ +V + K
Sbjct: 529 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK- 587
Query: 328 TIDDD-------VLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
DD+ AL+ G S A + M +G P L LCK
Sbjct: 588 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 647
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K DE EV +S + + + +Y+ ++ R A V+ +M P+V Y
Sbjct: 648 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 707
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+++ C+ A KL M GC N+ TY +I F +G+IE L L M K
Sbjct: 708 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 767
Query: 500 GVAPDATTYTSLLEGLCQETNLQAA 524
GVAP+ TY L++ C+ L A
Sbjct: 768 GVAPNYVTYRVLIDHCCKNGALDVA 792
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 96/476 (20%), Positives = 202/476 (42%), Gaps = 33/476 (6%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +L L + ++ + +++K + D Y ++ S + ++A FNE+
Sbjct: 444 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 503
Query: 146 KFNCEDIG--PEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ ++G P + +L+ + A ++F+ M G + + + I C+
Sbjct: 504 R----EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 559
Query: 202 NAKLGQVLSMLDEV--------------RKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
++ + + + + + +NS V ++ GFCK RVEEA K
Sbjct: 560 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 619
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
+LD + + C+P+ I Y + + +G + E + V + + G Y I
Sbjct: 620 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 679
Query: 308 -VERRICEAKELGEVI---VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVP 363
V+R+ +K L +++ + I ++++ L V D A M EKG P
Sbjct: 680 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC-KVGKTD--EAYKLMQMMEEKGCQP 736
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ T + + K + +E+ + + + + +Y V++ C +G L A+ ++
Sbjct: 737 NVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLL 796
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+EMK+ + Y ++E +E + + L D++ + L Y +LI +
Sbjct: 797 EEMKQTHWPTHTAGYRKVIEGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKA 854
Query: 484 GEIEGALRLFHNM--LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+E ALRL + + ++TY SL+E LC ++ AF++F++ V+
Sbjct: 855 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVI 910
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 145/383 (37%), Gaps = 55/383 (14%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D A K + EM GV + I F C K + S++ E+ + I +
Sbjct: 388 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ--GFIPDTSTY 445
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+++ C ++E AF + +E++ D Y I+ + F G + + + R+
Sbjct: 446 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 505
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSA 349
+G P Y I + +++ A EL
Sbjct: 506 VGCTPNVVTYTALIHAYLKAKKVSYANEL------------------------------- 534
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F M+ +G +P + T S L CK + ++ ++++ + + D++ Y
Sbjct: 535 ---FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY------ 585
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
++ P+V Y +L++ C+ + A+KL D M GC N
Sbjct: 586 -------------FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 632
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
Y+ LI +VG+++ A + M E G TY+SL++ + A +V +
Sbjct: 633 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 692
Query: 530 KSVNHDVMLARSILSTFMISLCR 552
K + + I + + LC+
Sbjct: 693 KMLENSCAPNVVIYTEMIDGLCK 715
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 158/378 (41%), Gaps = 17/378 (4%)
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
I + + S+ + +D KQ N + Y ++ + ++A + + +
Sbjct: 569 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 628
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ + ++L+ L G +D A ++ EMS G + + I ++ + +
Sbjct: 629 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 688
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+L ++ ENS VI +I G CK + +EA+K++ + + C+P+ + Y + +
Sbjct: 689 KVLSKML--ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 746
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
F ++G + +L++ GVAP YR I + A L E + +
Sbjct: 747 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 806
Query: 330 DDDVLNALIGSVSSIDPRSAIVFFNFMIEKGR---VPTLSTLSNLSKNLCKRNKSD---E 383
+I + + I + E G+ P LS L NL K + +
Sbjct: 807 HTAGYRKVIEGFN----KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALR 862
Query: 384 LVEVYKVLSAN--DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
L+E SA DY + +YN ++ LC + ++ A+ + EM +KG+ P++ + SL
Sbjct: 863 LLEEVATFSATLVDYSS---TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSL 919
Query: 442 MEACCREDLLRPAKKLWD 459
++ R + A L D
Sbjct: 920 IKGLFRNSKISEALLLLD 937
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 123/526 (23%), Positives = 231/526 (43%), Gaps = 10/526 (1%)
Query: 30 WTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHS 89
W P LE L L LR SL P V V+ L T +AL FF WA +Q + H P+ Y++
Sbjct: 84 WNPKLEGELRHL-LR-SLKPRQVCAVLQ--LQTDERVALRFFYWADRQWRYRHDPIVYYA 139
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
+L+ LS ++ VL+ + +I + +++ S + + A V ++
Sbjct: 140 MLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAG 199
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ ICN+ + VL +D A++ + M +E + I + I +C+ +L +
Sbjct: 200 IEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAM 259
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGF-CKGKRVEEAFKVLDE-LRIRECKPDFIAYRIV 267
++ E+ + S I+ + GF CK KR++E ++++ L+ PD + Y
Sbjct: 260 ELIAEMPFKGCS---PDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTF 316
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
G E L++ + Y + E R+ +AKE+ + S
Sbjct: 317 VHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGC 376
Query: 328 TIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
D ++I G A M + G P + + L LCK S E E
Sbjct: 377 IPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEARE 436
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
+ + + + + +Y+V++ G+ EA +++EM +KG P N L+++ C
Sbjct: 437 MMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLC 496
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+E+ + AK+ +Q +GC+ N+ + +I F + ++E AL L +M PD
Sbjct: 497 QEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVV 556
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
TYT++++ L ++ ++ A ++ K + ++ T + CR
Sbjct: 557 TYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCR 602
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 169/401 (42%), Gaps = 19/401 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+ + +L+ G+ D AL+ E R +G+ + FC ++ + +++E+
Sbjct: 314 NTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFS 373
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ I V +I+G C+ ++V++A K+L ++ CKP+ ++Y + G+
Sbjct: 374 K--GCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNS 431
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E ++ + P Y + G E + EA +L ++ F +N L
Sbjct: 432 LEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLL 491
Query: 338 IGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I S+ + A F + G + + + C+++ + + + + ++
Sbjct: 492 IQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNK 551
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR----EDLLR 452
D+ +Y ++ L GR+ EA + +M R GL P Y +++ CR EDLL
Sbjct: 552 HPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLL- 610
Query: 453 PAKKLWDQMFA-SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
KL ++M + C YN +I K G +E A +L +L DA T L
Sbjct: 611 ---KLLEKMLSRQECR---TAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHML 664
Query: 512 LEGLCQE----TNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
+E + + A +FN+++ D+ L + M+
Sbjct: 665 IESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLML 705
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 169/438 (38%), Gaps = 76/438 (17%)
Query: 154 PEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG---QVLS 210
P + ++L +L+ A ++ M+ R +E FG + + KL +VL+
Sbjct: 134 PIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLT 193
Query: 211 MLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
M+ + + I + I VL++ G R+++A + L+ ++I E +P+ I Y + +
Sbjct: 194 MMQKAGIEPDLSICNTAIHVLVM-----GNRLDKAVRFLERMQIVEIEPNVITYNCLIKG 248
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
+ + + + ++ + G +P Y + L E+RI E + L E K D
Sbjct: 249 YCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLME-----KMLKD 303
Query: 331 DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
++L P T + L K DE +E +
Sbjct: 304 SNLL----------------------------PDQVTYNTFVHMLSKHGHGDEALEFLRE 335
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ D Y+ +V C GR+ +A ++ EM KG PDV Y S++ C+E
Sbjct: 336 AEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERK 395
Query: 451 LRPAKKLWDQMFASGCSGNLK-----------------------------------TYNI 475
+ AKK+ QM+ GC N TY++
Sbjct: 396 VDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSV 455
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
L+ F G+ A L M++KG P L++ LCQE + A + +N+
Sbjct: 456 LMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG 515
Query: 536 VMLARSILSTFMISLCRR 553
+ +T + C++
Sbjct: 516 CAVNVVNFTTVIHGFCQK 533
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 99/504 (19%), Positives = 208/504 (41%), Gaps = 67/504 (13%)
Query: 56 INPYLLTHHSLALGFFNWA---------SQQPNFTHSP--LSYHSILKSLSLSRQINAID 104
I P ++T++ L G+ + ++ P SP +SY++++ L ++I +
Sbjct: 235 IEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVR 294
Query: 105 SVL-KQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV---KFNCEDIGPEICNSL 160
++ K +K + + D Y + L + + +A E +F + +G +++
Sbjct: 295 LLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGY---SAI 351
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
+ +G +D A ++ +EM +G + + I C+ K+ Q ML ++ K +
Sbjct: 352 VHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYK--H 409
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
+V +++G CK EA ++++ P+ I Y ++ F+ G E
Sbjct: 410 GCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEA 469
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE---------------VIVSG 325
++++ K G P + I L E ++ EAK E ++ G
Sbjct: 470 CDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHG 529
Query: 326 KFTIDDDVLNAL------------------------IGSVSSIDPRSAIVFFNFMIEKGR 361
F DD+ AL +G I+ + + M+ G
Sbjct: 530 -FCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMK--MLRVGL 586
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVY-KVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
+PT T + C+ + ++L+++ K+LS + T +YN ++ LC+ G L +AY
Sbjct: 587 IPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRT---AYNQVIEKLCSFGNLEQAY 643
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
++ ++ R D + + L+E+ + + + + +MF +LK + K
Sbjct: 644 KLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKL 703
Query: 481 SEVGEIEGALRLFHNMLEKG-VAP 503
G+ E A +L +E+G ++P
Sbjct: 704 MLEGKSEEADKLILRFVERGRISP 727
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/486 (23%), Positives = 217/486 (44%), Gaps = 45/486 (9%)
Query: 85 LSYHSILKSLSLSRQI-NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
+ ++ +L ++ RQ +A+ S+ KQ+++ ++ ++ +I ++ FSV
Sbjct: 91 IQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLA 150
Query: 144 EV-KFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+V K + P I +L+ L G AL++FD+M RG + + I C
Sbjct: 151 KVIKLGLQ---PTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLC 207
Query: 201 ---ENAKLGQVLSMLDEVRKRENSMINGSVIAVL-------------------------- 231
E A ++ + EV + + + ++I L
Sbjct: 208 KMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVV 267
Query: 232 ----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+I G C R +EA +L+E+ PD + + ++ + F G+V E + VLK
Sbjct: 268 SYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTM 327
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS---VSSI 344
++GV P Y + G ++ + EA++L +V+++ D + LI V I
Sbjct: 328 TEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRI 387
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
D A FN MI +G P + + L C+ K E E++K + N Y D+ +Y+
Sbjct: 388 D--EAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYS 445
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
V++ C G L +A+ + + M+ L P++ Y L+++ C+ L A+KL+ ++F
Sbjct: 446 VLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVH 505
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G +++ Y +I+ + G ++ AL F M E G P+ +Y ++ G Q + A
Sbjct: 506 GLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRA 565
Query: 525 FEVFNK 530
++ +
Sbjct: 566 VQLIGE 571
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 181/398 (45%), Gaps = 39/398 (9%)
Query: 158 NSLL-AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
N LL A++ Y D + + +M G+ +T + I FC + S+L +V
Sbjct: 94 NKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVI 153
Query: 217 KRENSMINGSVIA-VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
K + ++I +I+G CK +A ++ D++ R C+PD Y + MG
Sbjct: 154 KLG---LQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMG 210
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
++KK ++G P Y I L +R + EA ++
Sbjct: 211 ETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDI----------------- 253
Query: 336 ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
F++M KG PT+ + ++L + LC ++ E + +++ +
Sbjct: 254 -----------------FSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLN 296
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D+ ++++++ C G + EA GV++ M G++P+V YNSLM + + A+
Sbjct: 297 IMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEAR 356
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
KL+D M GC ++ +Y+ILI+ + V I+ A +LF+ M+ +G+ P+ +YT+L+
Sbjct: 357 KLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAF 416
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
CQ L+ A E+F + + S + C++
Sbjct: 417 CQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQ 454
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 123/503 (24%), Positives = 230/503 (45%), Gaps = 34/503 (6%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVL-KQVKVNKITLDSSVYRF 124
L L +F W+ ++ +HS IL SL+ +++ + I S L K VK K S+++
Sbjct: 14 LILRYFTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFLDKFVKYEKDYSVSAIFHA 73
Query: 125 I-----------------IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI----CNSLLAV 163
I + + ++ + F F D G ++ CN LL+
Sbjct: 74 ISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAG----DYGFKLSLISCNPLLSG 129
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L + + ++ EM R +E + I F + + C+ KL + ++++++ +
Sbjct: 130 LVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWG---V 186
Query: 224 NGSVIAV-LIIHGFCKGKRVEEAFK---VLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+ +VI +I G+CK R+ + +K +L E+ + P+ + Y I+ + F +V
Sbjct: 187 SPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSG 246
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
V + ++ G+ P Y I GL + ++ EA L + +VS + N LI
Sbjct: 247 AMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLIN 306
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G + AI FN M ++G P T + L CK + ++ +Y ++ F
Sbjct: 307 GFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFP 366
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
++ +YN +++ LC G ++ A ++ EM K L DV YN L+++ C++ R A KL
Sbjct: 367 EVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLL 426
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
D+MF G + + TYN L+ + G + AL + M KG + T+ L++G C +
Sbjct: 427 DEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLK 486
Query: 519 TNLQAAFEVFNKSVNHDVMLARS 541
L+ A + N+ + ++ R+
Sbjct: 487 GRLEDANGLLNEMLERGLVPNRT 509
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 185/440 (42%), Gaps = 80/440 (18%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+S++ ++ L ++N V++ +KV ++ + Y +I + K +
Sbjct: 156 ISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAI 215
Query: 145 VKFNCEDIGPEIC------NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+K E + IC N L+ D + A+++F EM +G+ + + + + I
Sbjct: 216 LK---EMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILING 272
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C + K+ + +++ D++ + + V ++I+GFCK K V EA + +++ +
Sbjct: 273 LCSDGKVDEAVALRDQMVSSD--LEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVD 330
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
P+ + Y + + + G + + + G+ P + Y I GL + + A+ L
Sbjct: 331 PNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSL 390
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+VS K + D +V +N +I+ +LCK+
Sbjct: 391 MNEMVSKKLSAD-------------------VVTYNILID---------------SLCKK 416
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+S R+A ++ EM KGL+P Y
Sbjct: 417 GES-----------------------------------RKAVKLLDEMFEKGLNPSHVTY 441
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
N+LM+ CRE LR A + +M G N+ T+N+LI F G +E A L + MLE
Sbjct: 442 NTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLE 501
Query: 499 KGVAPDATTYTSLLEGLCQE 518
+G+ P+ TTY + E + ++
Sbjct: 502 RGLVPNRTTYEIIKEEMMEK 521
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 186/398 (46%), Gaps = 16/398 (4%)
Query: 137 KAFSVFNE--VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
K FS F + V +N E N L+ L G I A + M +G + +
Sbjct: 96 KVFSEFPQLGVCWNTESY-----NILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTT 150
Query: 195 FIWKFCENAKLGQVLSMLDEVRKR---ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
I +C +L +V+ ++ E++ + N S+I +L CK +V E KVL E
Sbjct: 151 IIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLL-----CKSGKVVEGEKVLRE 205
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ R PD + Y + + F +G+ + + + P + + I GL +
Sbjct: 206 MMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGK 265
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSN 370
+ EA +L ++ F D+ ALI + + + A N M++ G P + T +
Sbjct: 266 VVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTA 325
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L+ LCK + D E+ + ++ +YN +V+ LC +G + +A +++EMK G
Sbjct: 326 LADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAG 385
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L PD Y +LM+A + + A++L +M G + T+N+L++ G++E
Sbjct: 386 LHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGE 445
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
RL MLEKG+ P+A TY S+++ C N++ + E++
Sbjct: 446 RLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIY 483
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 196/426 (46%), Gaps = 11/426 (2%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PN +Y SI+ L S ++ + VL+++ + D +Y +I + NTQ
Sbjct: 177 KPNL----YTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQ 232
Query: 137 KAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
A+ +F+E++ +I P+ ++L+ L+ G + A K+F+EM +G E + +
Sbjct: 233 AAYKLFSEME--AREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTA 290
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
I +C+ ++ + + +++ + + V + G CK ++ A ++L E+
Sbjct: 291 LIDGYCKLGEMKKAFFLHNQMVQI--GLTPNVVTYTALADGLCKSGELDTANELLHEMCR 348
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
+ + + Y + G++ + ++++ ++ G+ P T Y + + +
Sbjct: 349 KGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVK 408
Query: 315 AKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
A+EL ++ N L+ G S +M+EKG +P +T +++ K
Sbjct: 409 ARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMK 468
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
C RN E+Y+ + A D +YN+++ C + ++EA+ + +EM K +
Sbjct: 469 QYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNL 528
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
S YN+L++ + L A++L+++M G + + YN+ + E G +E L L
Sbjct: 529 TASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELC 588
Query: 494 HNMLEK 499
+EK
Sbjct: 589 DEAIEK 594
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/463 (21%), Positives = 199/463 (42%), Gaps = 3/463 (0%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY+ ++ SL +I +L +++ D Y II QK + E+
Sbjct: 112 SYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEM 171
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ +S++ +L G + K+ EM RGV + + I FC+
Sbjct: 172 QLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNT 231
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ E+ RE ++ S+ +I G +V EA K+ +E+ + +PD + Y
Sbjct: 232 QAAYKLFSEMEARE--IVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYT 289
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + + +G + + + + ++G+ P Y GL + A EL +
Sbjct: 290 ALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRK 349
Query: 326 KFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
++ N ++ G + + A+ M E G P T + L K + +
Sbjct: 350 GLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKA 409
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
E+ + + + ++NV+++ LC SG+L + +++ M KG+ P+ + YNS+M+
Sbjct: 410 RELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQ 469
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C + +R + +++ M A G + TYNILI + ++ A L M+EK
Sbjct: 470 YCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLT 529
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
A++Y +L++G + L A ++F + ++ + I + F+
Sbjct: 530 ASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFV 572
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 96/194 (49%)
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
KG P L T S++ LCK K E +V + + F D Y ++ C G +
Sbjct: 174 KGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQA 233
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
AY + EM+ + + PD +++L+ + A KL+++M G + TY LI
Sbjct: 234 AYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALID 293
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+ ++GE++ A L + M++ G+ P+ TYT+L +GLC+ L A E+ ++ + L
Sbjct: 294 GYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQL 353
Query: 539 ARSILSTFMISLCR 552
S +T + LC+
Sbjct: 354 NISTYNTIVNGLCK 367
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 53/306 (17%), Positives = 120/306 (39%), Gaps = 50/306 (16%)
Query: 45 DSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNF-----------THSPLSYHSILKS 93
D L ++ + P +T+ +L G+ + F T + ++Y ++
Sbjct: 270 DKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADG 329
Query: 94 LSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG 153
L S +++ + +L ++ + L+ S Y I+ L + N
Sbjct: 330 LCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGN------------------- 370
Query: 154 PEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
I A+K+ +EM G+ TI + + + + ++ + +L
Sbjct: 371 ----------------ILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLR 414
Query: 214 EVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
E+ R + +V+ ++++G C ++E+ ++L + + P+ Y + +++
Sbjct: 415 EMLDRG---LQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYC 471
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
+ ++ + + GV P +N Y I G R + EA L + +V +F +
Sbjct: 472 IRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTAS 531
Query: 333 VLNALI 338
NALI
Sbjct: 532 SYNALI 537
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 212/486 (43%), Gaps = 48/486 (9%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+ ++ +L + +++ ++ +++ D+ Y +I L + +QKA + E+
Sbjct: 116 TYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEM 175
Query: 146 -KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ C P++ +SL+ L DG A K+F EM RG + +I F + +
Sbjct: 176 ERHGCP---PDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKA 232
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
++ L +LDE+++R + G V +I GF K + EA+ +LDE++ CKPD +
Sbjct: 233 GRVDDALELLDEMKER--GVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVV 290
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + E VLKK K G P T Y I GL + +A L + +
Sbjct: 291 TYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRM 350
Query: 323 VSGKFTIDDDVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
S D + LI G + ++ SA V F M G P L T ++ L K
Sbjct: 351 KSKGCNPDVVTYSTLITALGKAARVE--SACVLFEEMESVGIQPDLFTYCSIITVLGKAG 408
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ D+ ++ + D+ +YN ++ L GR +EA + ++MK GL PDV+ Y+
Sbjct: 409 QVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYD 468
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCS----------------GNL------------- 470
+L+ + + A L ++ GC+ GN+
Sbjct: 469 ALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSK 528
Query: 471 ------KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
+YN LI ++ G + A ++ E+G PD +Y+SL+ L Q + A
Sbjct: 529 GLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTA 588
Query: 525 FEVFNK 530
FE+ +
Sbjct: 589 FELLEE 594
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 200/445 (44%), Gaps = 3/445 (0%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+S+L +L+ + Q + +++K K T D Y +I SL + + A V E
Sbjct: 10 VTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAE 69
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ N+L+ L G D AL++ EM G + I + +
Sbjct: 70 MQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGR 129
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + ++ E+R+R + + +I+G K R ++A ++L+E+ C PD + Y
Sbjct: 130 LSEAFTLFAEMRER--GCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTY 187
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ G + + ++ ++ G P + + + L R+ +A EL + +
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKE 247
Query: 325 GKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
NALI + D A + M G P + T S L L K ++ DE
Sbjct: 248 RGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDE 307
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+V K + D +YN +++ L +G L +A + MK KG +PDV Y++L+
Sbjct: 308 ACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLIT 367
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
A + + A L+++M + G +L TY +I+ + G+++ A RLF M KG++P
Sbjct: 368 ALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSP 427
Query: 504 DATTYTSLLEGLCQETNLQAAFEVF 528
D TY + L L + + A ++F
Sbjct: 428 DVITYNAFLNSLGRGGRFKEARKIF 452
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 162/377 (42%), Gaps = 9/377 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NSLL LA G + A +F+E+ + + I K L ++ E++
Sbjct: 13 NSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQA 72
Query: 218 R---ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+ N +++ L K + +EA ++L E+R C PD Y +
Sbjct: 73 KGCKPNLWTYNTLVDCL-----GKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKA 127
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G + E + + R+ G P T Y I GL R +A EL E + D
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTY 187
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
++LI G + A F M +GR P T + L L K + D+ +E+ +
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKE 247
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ +YN +++ G L EAY ++ EMKR G PDV Y+ L+ + L
Sbjct: 248 RGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDE 307
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A ++ +M GC + TYN LI+ + G + A RLF M KG PD TY++L+
Sbjct: 308 ACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLIT 367
Query: 514 GLCQETNLQAAFEVFNK 530
L + +++A +F +
Sbjct: 368 ALGKAARVESACVLFEE 384
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 200/468 (42%), Gaps = 40/468 (8%)
Query: 85 LSYHSILKSLS-LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
+Y+S++ L + R A++ +L++++ + D Y +I L + T KAF +F
Sbjct: 150 FTYNSLIYGLGKVGRSQKAME-LLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQ 208
Query: 144 EVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
E+K +L+ L G +D+AL++ DEM RGV+ + + I F +
Sbjct: 209 EMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVG 268
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
L + ++LDE+++ N V +I G K +++EA +VL ++ C PD I
Sbjct: 269 DLVEAYNLLDEMKR--NGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTIT 326
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE--- 320
Y + G + + + + + G P Y I L R+ A L E
Sbjct: 327 YNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEME 386
Query: 321 --------------VIVSGKF-TIDD---------------DVL--NALIGSVSSIDP-R 347
+ V GK +DD DV+ NA + S+ +
Sbjct: 387 SVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFK 446
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A F M E G +P ++T L L K + D+ + K L D ++ +
Sbjct: 447 EARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECL 506
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
L + G + EA+ ++Q KGL P S YN+L++A + + A + + G
Sbjct: 507 EILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGK 566
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
++ +Y+ LIS + G+I+ A L M ++G+ +Y++L+ L
Sbjct: 567 PDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 97/186 (52%), Gaps = 4/186 (2%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + T ++L L K + +E +++ L A + D+ SY+ +++ L +G+ A V
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ EM+ KG P++ YN+L++ + A +L +M +GC +++TYN LIS +
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH----DVML 538
G + A LF M E+G PD TY SL+ GL + Q A E+ + H DVM
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186
Query: 539 ARSILS 544
S+++
Sbjct: 187 YSSLIT 192
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 202/446 (45%), Gaps = 19/446 (4%)
Query: 100 INAIDSVL-KQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI-- 156
I +DS+ K +K +T +S ++ L + + KA VF + C + P++
Sbjct: 212 IALVDSMANKGLKPGIVTFNS-----VLKGLCKHRRFDKAKEVFRAMD-QCS-VAPDVRS 264
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
N L+ G ++ A+K + EM RGV + F I F K+ + L E++
Sbjct: 265 FNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMK 324
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
++ VI ++I GFC+ + EA +V DE+ C PD + Y +
Sbjct: 325 GL--GLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHR 382
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ + E +L + ++ GV P + I G + +A +L + ++ + D N+
Sbjct: 383 LLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNS 442
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G D A ++ M + P T S L + C++ + +E + +
Sbjct: 443 LIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKG 502
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
++ +YN ++ C SG +++ +Q+M + + PD+ +N+L+ +E+ + A
Sbjct: 503 NLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAF 562
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+++ M + TYN++I+ FSE G +E A R+F M G+ PD TY SL+ G
Sbjct: 563 NVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGH 622
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARS 541
N + AF++ HD M+ R
Sbjct: 623 VTAGNSKEAFQL------HDEMMHRG 642
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 188/430 (43%), Gaps = 47/430 (10%)
Query: 111 KVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDG 168
+VN TL+ V+ S + KA +V +E++ C + P++ N L+ G
Sbjct: 154 EVNAYTLNIMVH-----SYCKSLEFDKADTVISEMEKRC--VFPDVVTHNVLIDARFRAG 206
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVI 228
+D A+ + D M+++G++ + F + C++ + + + R + + V
Sbjct: 207 DVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVF---RAMDQCSVAPDVR 263
Query: 229 AV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+ ++I GFC+ VEEA K E++ R PD +++ + F G + L++
Sbjct: 264 SFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREM 323
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR 347
+ LG+ P Y I G C A + E + + D+
Sbjct: 324 KGLGLVPDGVIYTMVIGGF------CRAGSMSEAL-----RVRDE--------------- 357
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
M+ G +P + T + L LCK+++ + E+ + D+ ++ ++
Sbjct: 358 --------MVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLI 409
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
C G +A + + + L PDV YNSL++ CR+ L A +LWD M A
Sbjct: 410 HGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIF 469
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N TY+ILI E G++E A M+ KG P+ TY S+++G C+ N++ +
Sbjct: 470 PNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQF 529
Query: 528 FNKSVNHDVM 537
K + +++
Sbjct: 530 LQKMMQDNIL 539
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 151/335 (45%), Gaps = 2/335 (0%)
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+S +N + +++ H +CK ++A V+ E+ R PD + + ++ + G V
Sbjct: 152 DSEVNAYTLNIMV-HSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDA 210
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
++ G+ P + + GL RR +AKE+ + D N LIG
Sbjct: 211 AIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIG 270
Query: 340 SVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
+ + A+ F+ M ++G P + + S L R K D + +
Sbjct: 271 GFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVP 330
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D Y +++ C +G + EA V EM G PDV YN+L+ C++ L A++L
Sbjct: 331 DGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELL 390
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
++M G + +L T+ LI + G E AL+LF +L + + PD Y SL++G+C++
Sbjct: 391 NEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRK 450
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+L A E+++ ++ S + S C +
Sbjct: 451 GDLAKANELWDDMHAREIFPNHVTYSILIDSHCEK 485
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 154/367 (41%), Gaps = 11/367 (2%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
QQ T +S+ ++ S +++ + L+++K + D +Y +I + +
Sbjct: 289 QQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSM 348
Query: 136 QKAFSVFNE-VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
+A V +E V C P++ N+LL L + +A ++ +EM RGV F
Sbjct: 349 SEALRVRDEMVGLGCL---PDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTF 405
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDE 251
I +C + + L + D + + + V+A +I G C+ + +A ++ D+
Sbjct: 406 TTLIHGYCRDGNFEKALQLFDTLLHQR---LRPDVVAYNSLIDGMCRKGDLAKANELWDD 462
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ RE P+ + Y I+ + G V E L + G P Y I G
Sbjct: 463 MHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGN 522
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
+ + ++ + ++ D N LI G + + A FN M ++ P T +
Sbjct: 523 VKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNM 582
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
+ ++ +E V+K + A+ D +Y +++ T+G +EA+ + EM +G
Sbjct: 583 IINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRG 642
Query: 431 LDPDVSF 437
PD F
Sbjct: 643 FAPDDKF 649
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 207/462 (44%), Gaps = 9/462 (1%)
Query: 96 LSRQINAIDSVLKQVKVNK--ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG 153
L R +A+D VL Q+ + + D+ V+ ++ L++G + SV+NE+ I
Sbjct: 137 LRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEM--TGRGIQ 194
Query: 154 PEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM 211
P++ N+L+ L + A+ M +EMS GV F + F E + L +
Sbjct: 195 PDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRV 254
Query: 212 LDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
+ + E V ++I+G+CK RVE+A + + +PD + Y
Sbjct: 255 --KAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGL 312
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
G V V+ + G P Y I L + EAK + +V D
Sbjct: 313 CQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDT 372
Query: 332 DVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
N LI ++SS + A+ + KG P + T + L LCK + +++
Sbjct: 373 TTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEE 432
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ ++ D +YN+++ LC+ G+L A ++ EM+ G YN++++A C++
Sbjct: 433 MKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMR 492
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ A++++DQM A G S + T+N LI + I+ A L M+++G+ P+ TY S
Sbjct: 493 IEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNS 552
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+L C++ N++ A ++ + + T + LC+
Sbjct: 553 ILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCK 594
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/493 (21%), Positives = 221/493 (44%), Gaps = 10/493 (2%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL N A + +F S Y I++ L + + ++ ++++++ + + V R +
Sbjct: 72 ALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFV 131
Query: 127 PSLIQGKNTQKAFS-VFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHR 183
S + + A V N++ + + + + N LL VL + +++EM+ R
Sbjct: 132 ESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGR 191
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G++ + I C ++ + ML+E+ + + ++ GF + +E
Sbjct: 192 GIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSS--HGVAPDETTFTTLMQGFIEEGSIE 249
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
A +V ++ C P + ++ + MG V + ++++ G P Y F+
Sbjct: 250 AALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFV 309
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS---SIDPRSAIVFFNFMIEKG 360
GL + A ++ ++++ D N +I +S +D IV N M+++G
Sbjct: 310 HGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIV--NQMVDRG 367
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
+P +T + L L +N+ +E +++ + L+ D+ ++N++++ LC G
Sbjct: 368 CLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGI 427
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+ +EMK G PD YN L++ C L A L ++M ++GC + TYN +I
Sbjct: 428 RLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDAL 487
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
+ IE A +F M +G++ A T+ +L++GLC+ + A E+ + V +
Sbjct: 488 CKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNN 547
Query: 541 SILSTFMISLCRR 553
++ + C++
Sbjct: 548 ITYNSILTHYCKQ 560
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 174/402 (43%), Gaps = 8/402 (1%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMF 177
D Y + L Q + A V + + D N+++ L+ +G +D A +
Sbjct: 301 DQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIV 360
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFC 237
++M RG T F I +L + L + E+ + + ++I+ C
Sbjct: 361 NQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVK--GLSPDVYTFNILINALC 418
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K ++ +E++ C PD + Y I+ + MG + +L + G T
Sbjct: 419 KVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTV 478
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRSAIVFFN 354
Y I L + RI EA+E+ + + + + N LI + ID A
Sbjct: 479 TYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRID--DATELIE 536
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+++G P T +++ + CK+ + ++ + ++AN + D+ +Y +++ LC +G
Sbjct: 537 QMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAG 596
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
R + A +++ M+ KG+ P YN ++++ R + LR A L+ +M G + TY
Sbjct: 597 RTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYK 656
Query: 475 ILISKFSEVG-EIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
I+ G I+ A M+ KG P+ +++ L EGL
Sbjct: 657 IVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGL 698
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 178/411 (43%), Gaps = 4/411 (0%)
Query: 150 EDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
ED P + ++ L + G D + EM G + + F+ + +
Sbjct: 83 EDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDD 142
Query: 208 VLSM-LDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ + L+++ + +V+ +++ +G +++ V +E+ R +PD +
Sbjct: 143 AVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNT 202
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ + V ++L++ GVAP + + G I E I A + ++
Sbjct: 203 LIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAG 262
Query: 327 FTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
+ +N LI + A+ + I G P T + LC+ +
Sbjct: 263 CSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHAL 322
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
+V ++ + D+ +YN +++ L +G L EA G++ +M +G PD + +N+L+ A
Sbjct: 323 KVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 382
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
++ L A L ++ G S ++ T+NILI+ +VG+ +RLF M G PD
Sbjct: 383 SSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDE 442
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
TY L++ LC L A ++ N+ ++ + +T + +LC+++ I
Sbjct: 443 VTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRI 493
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 168/388 (43%), Gaps = 13/388 (3%)
Query: 63 HHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS 120
H S AL + Q+ H P +Y++++ LS + +++ ++ Q+ D++
Sbjct: 317 HVSHALKVMDLMLQE---GHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTT 373
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFD 178
+ +I +L ++A + E+ + + P++ N L+ L G +++F+
Sbjct: 374 TFNTLIVALSSQNRLEEALDLAREL--TVKGLSPDVYTFNILINALCKVGDPHLGIRLFE 431
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
EM G + + + I C KLG L +L+E+ N +V II CK
Sbjct: 432 EMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMES--NGCPRSTVTYNTIIDALCK 489
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
R+EEA +V D++ + + + + + + + ++++ K G+ P
Sbjct: 490 KMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNIT 549
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMI 357
Y + + I +A ++ E + + F ID LI G + + A+ M
Sbjct: 550 YNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMR 609
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC-TSGRL 416
KG PT + + ++L +RN + + +++ ++ D +Y ++ LC G +
Sbjct: 610 IKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPI 669
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+EA+ + EM KG P+ S + L E
Sbjct: 670 KEAFDFLVEMVNKGFMPEFSSFRMLAEG 697
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/197 (18%), Positives = 87/197 (44%), Gaps = 3/197 (1%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
+ S +++++++ L +++I+ +++Q+ + ++ Y I+ + N +KA
Sbjct: 508 ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAA 567
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+ + N +I +L+ L G ALK+ M +G+ + + I
Sbjct: 568 DILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSL 627
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK-GKRVEEAFKVLDELRIRECK 258
L L++ E+ E ++ ++ C+ G ++EAF L E+ +
Sbjct: 628 FRRNNLRDALNLFREM--TEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFM 685
Query: 259 PDFIAYRIVAEEFKLMG 275
P+F ++R++AE +G
Sbjct: 686 PEFSSFRMLAEGLLNLG 702
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 196/443 (44%), Gaps = 10/443 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
S+ +++K L L QI + ++ D +Y +I L + +T A + +
Sbjct: 146 SFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSM 205
Query: 146 -KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
K NC+ P++ +L+ L D A +F EM +G+ + + ++ C
Sbjct: 206 EKGNCQ---PDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNL 262
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+ V ++L+E+ ++ ++ ++ ++ CK V +A V+D + +PD +
Sbjct: 263 GEWKHVNTLLNEMV--DSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVV 320
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + L + E V G AP Y I G R+ +A L E +
Sbjct: 321 TYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEM 380
Query: 323 VSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
K + N LI + + + AI F M+ G++P L T L LCK
Sbjct: 381 CRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHL 440
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
D+ + + K + ++ D++ Y +++ +C +G L +A + + KGL P+V YN +
Sbjct: 441 DKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIM 500
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
C+ LL A KL+ +M + CS + TYN + F E A++L ML +G
Sbjct: 501 THGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGF 560
Query: 502 APDATTYTSLLEGLCQETNLQAA 524
+ D +T T+LL G+ + L +
Sbjct: 561 SCDVST-TTLLVGMLSDDGLDQS 582
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 167/365 (45%), Gaps = 5/365 (1%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D+AL F+ M H S + F + + + VLS+ RK ++ I +V
Sbjct: 55 LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSL---SRKMDSFGIPHNVYT 111
Query: 230 V-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+ ++I+ FC RV AF VL ++ C+PD ++ + + L G + E + K
Sbjct: 112 LNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMI 171
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS 348
G P Y I GL A L + G D V LI S+ ++
Sbjct: 172 WEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQT 231
Query: 349 -AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A F+ MI KG P + T ++L LC + + + + + + S +V
Sbjct: 232 QAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVV 291
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
LC G + +A+ V+ M + G++PDV Y +L++ C + A K++D M GC+
Sbjct: 292 DALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCA 351
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N+ +YN LI+ + ++ ++ A+ LF M + + P+ TY +L+ GLC LQ A +
Sbjct: 352 PNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIAL 411
Query: 528 FNKSV 532
F + V
Sbjct: 412 FREMV 416
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/457 (22%), Positives = 198/457 (43%), Gaps = 18/457 (3%)
Query: 82 HSPLS---YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
H P S + IL S++ ++ + + S+ +++ I + +I S A
Sbjct: 69 HPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFA 128
Query: 139 FSVFNEV-KFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
FSV ++ K C+ P+ + +L+ L +G I AL +FD+M G + + +
Sbjct: 129 FSVLAKILKLGCQ---PDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATL 185
Query: 196 IWKFCENAKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
I C+ + +L + K + + ++ G+ +IH CK ++ +AF + E+
Sbjct: 186 INGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGT-----LIHSLCKDRQQTQAFNLFSEM 240
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
+ P+ + + +G +L + + P + L E +
Sbjct: 241 ITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMV 300
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
+A ++ +++ D ALI G + A+ F+ M+ KG P + + + L
Sbjct: 301 AQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTL 360
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
CK + D+ + +++ + + +YN ++ LC GRL++A + +EM G
Sbjct: 361 INGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQ 420
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
PD+ Y L++ C+ L A L + S +++ Y I+I GE+E A
Sbjct: 421 IPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARD 480
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
LF N+ KG+ P+ TY + GLC+ L A ++F
Sbjct: 481 LFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLF 517
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 97/203 (47%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ FN M+ P++ + + ++ K + ++ + + + + ++ + NV+++
Sbjct: 58 ALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLIN 117
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C R+ A+ V+ ++ + G PD + + +L++ C E + A L+D+M G
Sbjct: 118 SFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQP 177
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ Y LI+ + G A+RL +M + PD Y +L+ LC++ AF +F
Sbjct: 178 DVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLF 237
Query: 529 NKSVNHDVMLARSILSTFMISLC 551
++ + + ++ + +LC
Sbjct: 238 SEMITKGISPNIVTCNSLVYALC 260
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 99/221 (44%), Gaps = 1/221 (0%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVP-TLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
++ S++ + S ++ + ++ +P + TL+ L + C N+ + V +
Sbjct: 80 ILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLG 139
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D S+ ++ LC G++ EA + +M +G PDV Y +L+ C+ A
Sbjct: 140 CQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAI 199
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L M C ++ Y LI + + A LF M+ KG++P+ T SL+ L
Sbjct: 200 RLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYAL 259
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
C + + N+ V+ +M L+T + +LC+ ++
Sbjct: 260 CNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMV 300
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 206/445 (46%), Gaps = 5/445 (1%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y +++ ++ S+L ++ + D Y +I ++ + AF V E+
Sbjct: 305 YATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMF 364
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
+ +L+ L G ++ A +F EM+ G++ + I + + +
Sbjct: 365 ARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNME 424
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ +L E++K EN N + I++G C + A ++ E+ KP+ + Y
Sbjct: 425 KAYELLIEIKK-ENLTANAYMCGA-IVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTT 482
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE-LGEVIVSG 325
+ + G E +L + G++P Y I+G ++ E K L E+I G
Sbjct: 483 IVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKG 542
Query: 326 KFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ A I G + + ++A F M++ G P ++L CK + +
Sbjct: 543 -LKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKA 601
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
++ + D+++++V++ L +G+L+EA GV E+ KGL PDV Y SL+
Sbjct: 602 FAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISN 661
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C+E L+ A +L D M G + N+ TYN LI+ ++GEI A LF + EKG+A +
Sbjct: 662 LCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARN 721
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFN 529
+ TY++++ G C+ NL AF++F+
Sbjct: 722 SVTYSTIIAGYCKSANLTEAFQLFH 746
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 200/453 (44%), Gaps = 19/453 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++ I V +++ KI L++ Y +I L + + +KA +F+E
Sbjct: 338 VAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSE 397
Query: 145 VKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ I P+I N L+ ++ A ++ E+ + + G + C
Sbjct: 398 MTM--MGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHC 455
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L + + E+ + VI I+ G K R EEA K+L ++ + PD
Sbjct: 456 GDLTRANELFQEMISW--GLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVF 513
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG--- 319
Y V F G + E + L + G+ P Y FI G C A E+
Sbjct: 514 CYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGY------CRAGEMQAAE 567
Query: 320 ----EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
E++ SG D + + G + A F M+++G +P + T S L L
Sbjct: 568 RSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGL 627
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
K K E + V+ L D+ +Y ++S LC G L+ A+ + +M +KG++P++
Sbjct: 628 SKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNI 687
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YN+L+ C+ + A++L+D + G + N TY+ +I+ + + + A +LFH
Sbjct: 688 VTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHG 747
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
M GV PD+ Y +L++G C+ N + A +F
Sbjct: 748 MKLVGVPPDSFVYCALIDGCCKAGNTEKALSLF 780
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 159/665 (23%), Positives = 261/665 (39%), Gaps = 142/665 (21%)
Query: 6 ATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHS 65
+T+ T S + + W L+E + L + L+P +V VI +
Sbjct: 33 STNADTNQSDNTVKEITSLLKQKNWQFLIESS----PLPNKLNPDVVFLVIKQNQVIDPK 88
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSL------------SLSRQINA-------IDSV 106
GFFNW + + F+ + LS SIL + L R I+ +DS+
Sbjct: 89 RLHGFFNWVNSRTVFSQN-LSTFSILSLILCNSGLFGNAANVLERMIDTRNPHVKILDSI 147
Query: 107 LKQVK-VNKITLDSSVYRFIIPSLIQGKNT--QKAFSVFNEVKFNCEDIGPEICNSL--- 160
+K K +N + SSV F I I K +A SVF K N +G CNSL
Sbjct: 148 IKCYKEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKD 207
Query: 161 -----------------LAVLASD--------------GYIDNALKMFDEMSHRGVEFST 189
L + D G ++ + +M +G +
Sbjct: 208 LLKGNRVELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNL 267
Query: 190 IGFGVFIWKFCENAKLGQVLSMLDEVRKREN-SMINGSVIAVLIIHGFCKGKRVEEAFKV 248
+ + V I C + G V L+ R N ++ + I +I GFC+ KR E +
Sbjct: 268 VTYSVVIAGLC---RAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSM 324
Query: 249 LDELRIRECKPDFIAYRIVAEEF---KLMGSVFE-REVVLKKKRKL-------------- 290
LDE+ KPD +AY + F +G F+ +E + +K KL
Sbjct: 325 LDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCK 384
Query: 291 -----------------GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
G+ P Y I G + + +A EL I T + +
Sbjct: 385 IGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYM 444
Query: 334 LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
A++ G D A F MI G P + + + K L K + +E +++ V+
Sbjct: 445 CGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMK 504
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D+ YN ++ C +G++ E + EM KGL P+V Y + + CR ++
Sbjct: 505 DQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQ 564
Query: 453 PAKKLWDQMFASGCSGN-----------------------------------LKTYNILI 477
A++ + +M SG + N ++T+++LI
Sbjct: 565 AAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLI 624
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
S+ G+++ A+ +F +L+KG+ PD TYTSL+ LC+E +L+AAFE+ HD M
Sbjct: 625 HGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFEL------HDDM 678
Query: 538 LARSI 542
+ I
Sbjct: 679 CKKGI 683
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 206/459 (44%), Gaps = 17/459 (3%)
Query: 110 VKVNKITLDSSVYR----FIIPSLIQGKNTQKAFSVFNEVK------FNCEDIG--PEIC 157
+K N++ L VY+ I+P + N A+ +V+ F+ E+ G P +
Sbjct: 209 LKGNRVELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLV 268
Query: 158 --NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+ ++A L G +D AL++ M+++G+ + I FC + + SMLDE+
Sbjct: 269 TYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEM 328
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ V +I+GF K + AF+V +E+ R+ K + Y + +G
Sbjct: 329 YTM--GLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIG 386
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ + E + + +G+ P Y I G + + +A EL I T + +
Sbjct: 387 DLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCG 446
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
A++ G D A F MI G P + + + K L K + +E +++ V+
Sbjct: 447 AIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQ 506
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D+ YN ++ C +G++ E + EM KGL P+V Y + + CR ++ A
Sbjct: 507 GLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAA 566
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++ + +M SG + N LI + + G A F ML++GV PD T++ L+ G
Sbjct: 567 ERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHG 626
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
L + LQ A VF++ ++ ++ ++ + +LC+
Sbjct: 627 LSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKE 665
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/489 (20%), Positives = 200/489 (40%), Gaps = 39/489 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y++++ L + + + ++ + I D Y +I + +N +KA+ + E
Sbjct: 373 FTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIE 432
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+K +C +++ L G + A ++F EM G++ + + + + + +
Sbjct: 433 IKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGR 492
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ + +L ++ + + +I GFCK ++EE L E+ + KP+ Y
Sbjct: 493 FEEAIKILGVMK--DQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTY 550
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ G + E + G+AP + I G + +A ++
Sbjct: 551 GAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLD 610
Query: 325 GKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
D + LI +S + A+ F+ +++KG VP + T ++L NLCK
Sbjct: 611 QGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKA 670
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFL--------------------------------- 410
E++ + ++ +YN +++ L
Sbjct: 671 AFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIA 730
Query: 411 --CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C S L EA+ + MK G+ PD Y +L++ CC+ A L+ M G +
Sbjct: 731 GYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIAS 790
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+N LI F ++G++ A +L +M++ + P+ TYT L+E C N++ A ++F
Sbjct: 791 T-PAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLF 849
Query: 529 NKSVNHDVM 537
+ +VM
Sbjct: 850 MEMQKRNVM 858
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 166/398 (41%), Gaps = 4/398 (1%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
IC L+ DG A F M +GV V I +N KL + + + E+
Sbjct: 584 ICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSEL 643
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ ++ +I CK ++ AF++ D++ + P+ + Y + +G
Sbjct: 644 LDK--GLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLG 701
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ + + + G+A + Y I G + EA +L + D V
Sbjct: 702 EIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYC 761
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
ALI G + + A+ F M+E+G + + + L K K E ++ + + N
Sbjct: 762 ALIDGCCKAGNTEKALSLFLGMVEEG-IASTPAFNALIDGFFKLGKLIEAYQLVEDMVDN 820
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ +Y +++ + CT G ++EA + EM+++ + P+V Y SL+ R
Sbjct: 821 HITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEM 880
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
L+D+M A G + +++++ + G AL+L +ML +GV YT L++
Sbjct: 881 FSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDA 940
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
LC+ NL +V ++ L+ + T + R
Sbjct: 941 LCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHR 978
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 170/385 (44%), Gaps = 12/385 (3%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEI--CNSLLAVLASDGYIDNA 173
D + +I L + Q+A VF+E+ D G P++ SL++ L +G + A
Sbjct: 616 DVQTHSVLIHGLSKNGKLQEAMGVFSELL----DKGLVPDVFTYTSLISNLCKEGDLKAA 671
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLII 233
++ D+M +G+ + + + I C+ ++ + + D + E + SV II
Sbjct: 672 FELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIP--EKGLARNSVTYSTII 729
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
G+CK + EAF++ +++ PD Y + + G+ + + + G+A
Sbjct: 730 AGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIA 789
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVF 352
T + I G ++ EA +L E +V T + LI ++ + + A
Sbjct: 790 S-TPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQL 848
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F M ++ +P + T ++L + + E+ ++ + A D +++VMV
Sbjct: 849 FMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLK 908
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G +A ++ +M +G++ + Y L++A C+ + L K+ D++ G +L T
Sbjct: 909 EGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLAT 968
Query: 473 YNILISKFSEVGEIEGALRLFHNML 497
L+ F G + ALR+ +M+
Sbjct: 969 CGTLVCCFHRAGRTDEALRVLESMV 993
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 23/247 (9%)
Query: 329 IDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVP-TLSTLSNLSKNLCK---------- 377
++ DV+ +I IDP+ FFN++ + LST S LS LC
Sbjct: 70 LNPDVVFLVIKQNQVIDPKRLHGFFNWVNSRTVFSQNLSTFSILSLILCNSGLFGNAANV 129
Query: 378 -------RNKS----DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
RN D +++ YK ++ + + + + +++ G L EA V
Sbjct: 130 LERMIDTRNPHVKILDSIIKCYKEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGA 189
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
K ++ NSL + + + + K++ M + ++ TY LI+ + VG++
Sbjct: 190 KTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGMLGA-IVPDVYTYTNLINAYCRVGKV 248
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
E + +M EKG P+ TY+ ++ GLC+ ++ A E+ N ++ I +T
Sbjct: 249 EEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATL 308
Query: 547 MISLCRR 553
+ CR+
Sbjct: 309 IDGFCRQ 315
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/388 (20%), Positives = 162/388 (41%), Gaps = 44/388 (11%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
THS L H + K+ L + +L + + D Y +I +L + + + AF
Sbjct: 619 THSVL-IHGLSKNGKLQEAMGVFSELLDK----GLVPDVFTYTSLISNLCKEGDLKAAFE 673
Query: 141 VFNEVKFNCE-DIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
+ +++ C+ I P I N+L+ L G I A ++FD + +G+ +++ + I
Sbjct: 674 LHDDM---CKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIA 730
Query: 198 KFCENAKLGQVL-------------------SMLDEVRKRENS---------MINGSVIA 229
+C++A L + +++D K N+ M+ + +
Sbjct: 731 GYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIAS 790
Query: 230 V----LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
+I GF K ++ EA+++++++ P+ + Y I+ E +G++ E E +
Sbjct: 791 TPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFM 850
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS-VSSI 344
+ +K V P Y + G R E L + +V+ DD + ++ + +
Sbjct: 851 EMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEG 910
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
+ A+ + M+ +G + + L LCK N E+++V + + +
Sbjct: 911 NWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCG 970
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLD 432
+V +GR EA V++ M R L+
Sbjct: 971 TLVCCFHRAGRTDEALRVLESMVRSFLN 998
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 100/234 (42%), Gaps = 14/234 (5%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWAS-----------QQPNFTHSPLSYHSILKSLS 95
L + + INP ++T+++L G + + ++Y +I+
Sbjct: 674 LHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYC 733
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
S + + +K+ + DS VY +I + NT+KA S+F + P
Sbjct: 734 KSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPA 793
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
N+L+ G + A ++ ++M + + + + + I C + + + E+
Sbjct: 794 F-NALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEM 852
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+KR N M N + ++HG+ + R E F + DE+ R KPD +A+ ++ +
Sbjct: 853 QKR-NVMPN-VLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVD 904
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 218/504 (43%), Gaps = 24/504 (4%)
Query: 65 SLALGFFNWASQQPNFT--------HSPLSYHSILKSLSLSRQI--NAIDSV---LKQVK 111
SL L F +WA Q F+ H Y + SL+ ++ N +D L Q
Sbjct: 62 SLVLKFLDWARSQQFFSFQCKCLALHILTRYKLYKTAQSLAEEVVVNTVDETGEDLFQCL 121
Query: 112 VN---KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLL-AVLASD 167
N + S+V+ ++ S + KA S+ N K G N++L AV+ +
Sbjct: 122 KNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTK 181
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
+ A +F EM GV + + + I FC L L E+ + N + V
Sbjct: 182 QSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMER--NGCLPNVV 239
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
II +CK +++ EAFK+L + ++ P+ I+Y +V G + E +L++
Sbjct: 240 TYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM 299
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DP 346
K P + I G +A L +V + + LI S+ +
Sbjct: 300 SKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNL 359
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A+ F + M ++G P T + L ++ + ++ K + N + + +YN +
Sbjct: 360 NRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNAL 419
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
++ C GR+ +A G++QEM +G PDV Y++++ CR L A +L +M A G
Sbjct: 420 INGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF- 525
S ++ TY+ LI + + LF ML G+ PD TYTSL+ C E +L A
Sbjct: 480 SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR 539
Query: 526 ---EVFNKSVNHDVMLARSILSTF 546
E+ K + D++ +++ F
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGF 563
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 205/463 (44%), Gaps = 10/463 (2%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQ-INAIDSVLKQVKVNKITLDSSVYRFI 125
AL N A + F LSY++IL ++ ++Q + + + K++ + ++ + Y +
Sbjct: 151 ALSIVNLA-KSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNIL 209
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
I N + F E++ N N+++ I A K+ M+ +G+
Sbjct: 210 IRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGL 269
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
+ I + V I C ++ + +L+E+ KR + V +I+G+C +A
Sbjct: 270 NPNLISYNVVINGLCREGQMKETSEILEEMSKRR--YVPDRVTFNTLINGYCNVGNFHQA 327
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
+ E+ P+ + Y + G++ L + R G+ P Y I G
Sbjct: 328 LVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDG 387
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRV 362
+ + +A ++ + +V FT NALI + ++ S ++ MIE+G +
Sbjct: 388 FSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLL--QEMIERGFI 445
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + + S + C+ + ++ ++ + A D+ +Y+ ++ LC RL E +
Sbjct: 446 PDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDL 505
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
QEM GL PD Y SL+ A C E L A +L D+M G S ++ TYN+LI+ F++
Sbjct: 506 FQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNK 565
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+ A RL +L + P+ TY +L++ C ++A
Sbjct: 566 QSRTKEAKRLLLKLLYEESVPNEITYNTLIDN-CNNLEFKSAL 607
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 170/402 (42%), Gaps = 28/402 (6%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY+ ++ L Q+ +L+++ + D + +I N +A + E
Sbjct: 274 ISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAE 333
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ N + P + +L+ + G ++ A++ D+M RG+ + + I F +
Sbjct: 334 MVKN--GLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQ 391
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L Q ++ E+ EN + +I+G C R+E+A +L E+ R PD +
Sbjct: 392 GFLKQAYQIMKEMV--ENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVV 449
Query: 263 AYRIVAEEF---KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
+Y + F + + F+ +V + K G++P Y I GL +RR+ E +L
Sbjct: 450 SYSTIISGFCRNQELEKAFQLKVEMVAK---GISPDVATYSSLIQGLCKQRRLGEVCDLF 506
Query: 320 EVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ ++S D+ +LI + D A+ + MI+KG P + T + L K+
Sbjct: 507 QEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQ 566
Query: 379 NKSDE--------LVE-------VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+++ E L E Y L N + +S ++ C G + EA V+
Sbjct: 567 SRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVL 626
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+ M +KG + YN ++ + + A L+ +M SG
Sbjct: 627 ESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSG 668
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Query: 402 SYNVMV-SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
SYN ++ + + T ++ A G+ +EM G+ P+V YN L+ C L + +
Sbjct: 169 SYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGE 228
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M +GC N+ TYN +I + ++ +I A +L M KG+ P+ +Y ++ GLC+E
Sbjct: 229 MERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQ 288
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
++ E+ + + R +T + C
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYC 319
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/500 (23%), Positives = 213/500 (42%), Gaps = 59/500 (11%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK-FNCEDIGPEIC--NSLLA 162
VL+++K + I + S + +I + + +KA F ++ F+C+ P++ N +L
Sbjct: 115 VLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCK---PDLFAFNLILH 171
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
L AL ++++M + + +G+ I C+ K L + DE+ R +
Sbjct: 172 FLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDR--GI 229
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+ +I +++ G C+ K++ +A ++ ++R C D I Y ++ F G + +
Sbjct: 230 LPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFT 289
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+L+ K G Y I GL RR EA + ++ D + +I +S
Sbjct: 290 LLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLS 349
Query: 343 SIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ R A+ M E+G P + L K C DE + +S +D F +
Sbjct: 350 Q-EGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNN 408
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL------------------- 441
+Y++++ +C +G + +A + +EM++ G P V +NSL
Sbjct: 409 HTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQ 468
Query: 442 -----------------------------MEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
ME C ++ A KL Q+ SG +++T
Sbjct: 469 MEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRT 528
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YNILI+ F + G I GA +LF M KG PD+ TY +L++GL + + A E+F + V
Sbjct: 529 YNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMV 588
Query: 533 NHDVMLARSILSTFMISLCR 552
+ S T M CR
Sbjct: 589 KKGCVPESSTYKTIMTWSCR 608
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 196/444 (44%), Gaps = 24/444 (5%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
+V Q+ + D Y +I L + TQ A +F+E+ I + +L+ L
Sbjct: 184 AVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGL 243
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
I +A ++F +M G I + V + FC++ L ++L + K +
Sbjct: 244 CQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTK------D 297
Query: 225 GSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
G ++ V+ +I+G + +R EEA ++ KPD + Y I+ G V E
Sbjct: 298 GHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEA 357
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-G 339
+L + + G+ P T Y I G + EA+ L I ++ + LI G
Sbjct: 358 LTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICG 417
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY----------- 388
+ A F M + G +P++ T ++L LCK N+ +E ++
Sbjct: 418 MCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSL 477
Query: 389 --KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
++ D D+ S VM+ LC SG + +AY ++ ++ G+ PD+ YN L+ C
Sbjct: 478 FLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFC 537
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ + A KL+ +M G + TY LI G E AL +F M++KG P+++
Sbjct: 538 KFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESS 597
Query: 507 TYTSLLEGLCQETNLQAAFEVFNK 530
TY +++ C+E N+ A V+ K
Sbjct: 598 TYKTIMTWSCRENNISLALSVWMK 621
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/485 (20%), Positives = 189/485 (38%), Gaps = 83/485 (17%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK-NT 135
+P HS YHS ++ S +++ I L ++ + S + + I S++Q + +T
Sbjct: 18 KPTLFHS---YHSRTNPIATSIEVSTIIETLDPMEDGLKVISSRIRSYTITSVLQEQPDT 74
Query: 136 QKAFSVF----NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+ F +F C + I L+ A + Y K+ E+ + ++ S+
Sbjct: 75 RLGFRLFIWSLKSWHLRCRTVQDLIIGKLIKENAFELY----WKVLQELKNSAIKISSEA 130
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
F V I + E +DE + E+F ++ +
Sbjct: 131 FSVLIEAYSEAG--------MDE--------------------------KAVESFGLMRD 156
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+CKPD A+ ++ +++K+ F+L L V +
Sbjct: 157 F---DCKPDLFAFNLILH------------FLVRKE-------------AFLLALAVYNQ 188
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
+ + +V+ G + G + + A+V F+ M ++G +P S +
Sbjct: 189 MLKCNLNPDVVTYGIL---------IHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIV 239
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
LC+ K + ++ + A+ D+ +YNV+++ C SG L +A+ ++Q + + G
Sbjct: 240 LSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGH 299
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
V Y L+ R A + +M ++ Y I+I S+ G + AL
Sbjct: 300 ILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALT 359
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
L M E+G+ PD Y +L++G C L A + + HD S + +C
Sbjct: 360 LLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMC 419
Query: 552 RRVLI 556
+ LI
Sbjct: 420 KNGLI 424
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/456 (20%), Positives = 190/456 (41%), Gaps = 46/456 (10%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+ +L S ++ ++L+ + + L Y +I L + + ++A +
Sbjct: 269 ITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQ- 327
Query: 145 VKFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
K E+I P++ + + L+ +G + AL + EM+ RG+ TI + I FC+
Sbjct: 328 -KMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDM 386
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L + S+ E+ K + N ++LI G CK + +A + E+ C P +
Sbjct: 387 GYLDEAESLRLEISKHD-CFPNNHTYSILIC-GMCKNGLINKAQHIFKEMEKLGCLPSVV 444
Query: 263 AYRIVA---------EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+ + EE +L+ ++ E+V K L ++ T+ + ++ R+C
Sbjct: 445 TFNSLINGLCKANRLEEARLL--FYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLC 502
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
E+ G ++ + K + +++ G +P + T + L
Sbjct: 503 ES---GMILKAYKLLMQ-------------------------LVDSGVLPDIRTYNILIN 534
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
CK + +++K + + D +Y ++ L +GR +A + ++M +KG P
Sbjct: 535 GFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVP 594
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+ S Y ++M CRE+ + A +W + + ++ F E++ A+R
Sbjct: 595 ESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDN-EELQTAIRRL 653
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
M K D YT L GL Q AF +F+
Sbjct: 654 LEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFS 689
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 50/268 (18%), Positives = 107/268 (39%), Gaps = 37/268 (13%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L G I A K+ ++ GV + + I FC+ + + E++ + + +
Sbjct: 501 LCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGH--M 558
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVA--------------- 268
SV +I G + R E+A ++ +++ + C P+ Y+ +
Sbjct: 559 PDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSV 618
Query: 269 -------------EEFKLMGSVFERE---VVLKKKRKLGVAPRTND---YREFILGLIVE 309
E+ +++ F+ E +++ ++ + + D Y F++GL+
Sbjct: 619 WMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQA 678
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTL 368
+R CEA + V+ K I LIG + ++ A+ F F +E+G
Sbjct: 679 KRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPIC 738
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ L NL ++ D+ + + + A+ Y
Sbjct: 739 NQLLCNLLHLDRKDDALFLANRMEASGY 766
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/501 (22%), Positives = 227/501 (45%), Gaps = 28/501 (5%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
S AL F+ + PN +++ +++ L ++ ++L ++ + + + Y
Sbjct: 164 SEALDLFHQMCR-PNV----VTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT 218
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSH 182
I+ + + +T A ++ +++ I P I ++++ L DG +A ++ EM
Sbjct: 219 IVDGMCKIGDTVSALNLLRKME-EMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQE 277
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKR 241
+G+ + I FC + + + +L E+ +R+ IN +V+ +I+ + K ++
Sbjct: 278 KGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERK---INPNVVTYSALINAYVKERK 334
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
EA ++ DE+ R P+ I Y + + F + E + G +P +
Sbjct: 335 FFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNT 394
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKG 360
I G +RI + EL + D N LI + D +A+ MI G
Sbjct: 395 LIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSG 454
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA-----------NDYFTDMESYNVMVSF 409
P + T + L LC K + +E++K + N D+++YN+++S
Sbjct: 455 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISG 514
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
L G+ EA + +EM +G+ P+ Y+S++ C++ L A +++D M + S +
Sbjct: 515 LINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPD 574
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ T+N L+S + + G ++ L LF M +G+ DA TY +L+ G + N+ A ++F
Sbjct: 575 VVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQ 634
Query: 530 K----SVNHDVMLARSILSTF 546
+ V D + RS+L+
Sbjct: 635 EMISSGVYPDTITIRSMLTVL 655
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 179/409 (43%), Gaps = 52/409 (12%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L+ L +G + A+ + D M G++ + I +G + C K+G +S L+ +RK
Sbjct: 183 TLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC---KIGDTVSALNLLRKM 239
Query: 219 E--NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E + + VI II G K R +A + E++ + PD Y + + F G
Sbjct: 240 EEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGR 299
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
E + +L++ + + P Y I + ER+ EA+EL
Sbjct: 300 WSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEEL------------------ 341
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
++ M+ +G +P T +++ CK+N+ D ++ V++
Sbjct: 342 ----------------YDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGC 385
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ ++N ++ C + R+ + ++ EM GL D + YN+L+ C L A
Sbjct: 386 SPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALD 445
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE-----------KGVAPDA 505
L QM +SG ++ T N L+ + G+++ AL +F M + GV PD
Sbjct: 446 LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDV 505
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS-LCRR 553
TY L+ GL E A E++ K + H ++ +I + MI+ LC++
Sbjct: 506 QTYNILISGLINEGKFLEAEELY-KEMPHRGIVPNTITYSSMINGLCKQ 553
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/463 (23%), Positives = 200/463 (43%), Gaps = 23/463 (4%)
Query: 77 QPNFTHSPLSYHSILKSL-SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
QPN ++Y +I+ + + ++A++ + K +++ I + +Y II L +
Sbjct: 210 QPN----QITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRH 265
Query: 136 QKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
A +++ E++ + I P++ N ++ S G A ++ EM R + + + +
Sbjct: 266 SDAHNLYTEMQE--KGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYS 323
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
I + + K + + DE+ R +I ++ +I GFCK R++ A + +
Sbjct: 324 ALINAYVKERKFFEAEELYDEMLPR--GIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMA 381
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+ C PD + + + + + + +L + + G+ T Y I G + +
Sbjct: 382 TKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLN 441
Query: 314 EAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIE-----------KGR 361
A +L + ++S D N L+ G + + A+ F M + G
Sbjct: 442 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGV 501
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P + T + L L K E E+YK + + +Y+ M++ LC RL EA
Sbjct: 502 EPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQ 561
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+ M K PDV +N+L+ C+ + +L+ +M G + TY LI F
Sbjct: 562 MFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFR 621
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
+VG I GAL +F M+ GV PD T S+L L + L+ A
Sbjct: 622 KVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRA 664
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 157/373 (42%), Gaps = 8/373 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ S + AL F +++ G + + F + C ++ + L + ++
Sbjct: 116 NILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM-C 174
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R N V +++G C+ RV EA +LD + +P+ I Y + + +G
Sbjct: 175 RPNV-----VTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDT 229
Query: 278 FEREVVLKKKRKLG-VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+L+K ++ + P Y I GL + R +A L + D N
Sbjct: 230 VSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNC 289
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
+I G SS A M+E+ P + T S L K K E E+Y +
Sbjct: 290 MIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRG 349
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ +YN M+ C RL A + M KG PDV +N+L++ C +
Sbjct: 350 IIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGT 409
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L +M +G + TYN LI F VG++ AL L M+ GV PD T +LL+GL
Sbjct: 410 ELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 469
Query: 516 CQETNLQAAFEVF 528
C L+ A E+F
Sbjct: 470 CDNGKLKDALEMF 482
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 163/395 (41%), Gaps = 41/395 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ V+ D + ++ +M + + F + I FC +KL LS ++ K
Sbjct: 81 NKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITK 140
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
V ++HG C RV EA + ++ C+P+ + + + G V
Sbjct: 141 L--GFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRV 194
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E +L + + G+ P Y IV G I D V
Sbjct: 195 VEAVALLDRMVEDGLQPNQITY--------------------GTIVDGMCKIGDTV---- 230
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRV-PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
SA+ M E + P + S + L K + + +Y +
Sbjct: 231 ----------SALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGI 280
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
F D+ +YN M+ C+SGR EA ++QEM + ++P+V Y++L+ A +E A++
Sbjct: 281 FPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEE 340
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L+D+M G N TYN +I F + ++ A +F+ M KG +PD T+ +L++G C
Sbjct: 341 LYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYC 400
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+ E+ ++ ++ + +T + C
Sbjct: 401 GAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFC 435
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 131/561 (23%), Positives = 242/561 (43%), Gaps = 55/561 (9%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
KW P E+ L L LR + LV V+ + ++ + FF WA+++ N+ H +Y
Sbjct: 72 KWGPDAERALEVLMLR--VDHWLVREVMKTDVGV--NVKMQFFRWAAKKRNYQHDTSTYM 127
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSV-YRFIIPSLIQGKNTQKAFSVFNEVKF 147
+++ L L Q + +++++ + I + + + +I L K KA ++F ++K
Sbjct: 128 ALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKA 187
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG-VEFSTIGFGVFIWKFCENAKLG 206
+ NS++ +L +G + ++++EMS+ G T+ + I FC+ +
Sbjct: 188 RKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQD 247
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLII---------HG-----------FC--------- 237
+ +L+E+ +EN M + I +II HG +C
Sbjct: 248 SAIRLLNEM--KENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTE 305
Query: 238 ------KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
K R++EA+ E++ +CKPD + ++ +G + LK ++G
Sbjct: 306 LIRGLGKAGRIDEAYHFYHEMQREDCKPDTV---VMNNMINFLGKAGRLDDGLKLFEEMG 362
Query: 292 VA---PRTNDYREFILGLIVER-RICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDP 346
V+ P Y I L + R+ E E + + + LI G +
Sbjct: 363 VSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRI 422
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A++ M EKG P + +L L K + D E+++ L N + Y VM
Sbjct: 423 EKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVM 482
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ L +GRL +A + EM + G P+V YN+LM R +L A +M GC
Sbjct: 483 IKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGC 542
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
++ +YNI+++ ++ G A+ + NM + PDA +Y ++L L + A E
Sbjct: 543 LPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAE 602
Query: 527 VFNK----SVNHDVMLARSIL 543
+ + +D++ SIL
Sbjct: 603 LMKEMNALGFEYDLITYSSIL 623
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 178/427 (41%), Gaps = 22/427 (5%)
Query: 70 FFNWASQQPNFTHSPLSYHSILKSL-SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPS 128
+N S + + ++Y +++ + L RQ +AI +L ++K N + + +Y II
Sbjct: 216 LYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAI-RLLNEMKENGMQPTAKIYTMIISL 274
Query: 129 LIQGKNTQKAFSVFNEVKF-NCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGV 185
+ N A S+F E+++ C P++ L+ L G ID A + EM
Sbjct: 275 FFKLDNVHGALSLFEEMRYMYCR---PDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDC 331
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE---NSMINGSVIAVLIIHGFCKGKRV 242
+ T+ I + +L L + +E+ N + ++I L F RV
Sbjct: 332 KPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKAL----FESKSRV 387
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
E F + ++ P Y I+ + F + + ++L++ + G P Y
Sbjct: 388 SEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSL 447
Query: 303 ILGLIVERRI---CEA-KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIE 358
I L +R CE +EL E S + ++ L G +D AI F+ M +
Sbjct: 448 IDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHL-GKAGRLD--DAINLFDEMSK 504
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
G P + + L L + DE + + + + D+ SYN++++ L +G
Sbjct: 505 LGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHR 564
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A ++ MK + PD YN+++ A + A +L +M A G +L TY+ ++
Sbjct: 565 AMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILE 624
Query: 479 KFSEVGE 485
+V +
Sbjct: 625 AIGKVDQ 631
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/499 (24%), Positives = 220/499 (44%), Gaps = 19/499 (3%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVN-KITLDSSVYRFI 125
AL FN ++ F H+ L+Y +++ L + +A++ VL ++++N +L VY
Sbjct: 23 ALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYVSA 82
Query: 126 IPSLIQGKNTQKAFSVFNEVKF-NCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSH 182
+ + + Q+A VF + F NCE P I N+++ +L GY + A K++ M H
Sbjct: 83 MRNYGRKGKVQEAVDVFERMDFYNCE---PSIFSYNAIMNILVEYGYFNQAHKVYLRMKH 139
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRV 242
G+ F + I FC + L +L+ + + + +V+ +I GF +
Sbjct: 140 EGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCEL--NAVVYCTVISGFYEENYQ 197
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
EA+++ +++ P + + G + E E +L K K GV P + F
Sbjct: 198 VEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIF 257
Query: 303 ILGLI-------VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFN 354
I GL ++ EA+ +V+ DD N +I S + + A
Sbjct: 258 IQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILK 317
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
KG VP T +L +C+ D + +++ + YN ++ L G
Sbjct: 318 DAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQG 377
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ +A ++ +M ++G+ PD+ YN ++ C+ + A L + A G ++ T+N
Sbjct: 378 LVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFN 437
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
LI + + +++ A+ + +M GV PD TY S+L GLC+ + E F K +
Sbjct: 438 TLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETF-KMIME 496
Query: 535 DVMLARSILSTFMI-SLCR 552
L I +I SLC+
Sbjct: 497 KGCLPNIITYNILIESLCK 515
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/514 (21%), Positives = 220/514 (42%), Gaps = 52/514 (10%)
Query: 69 GFFNWASQ------QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVY 122
G+FN A + ++ +KS +++ A +L + L++ VY
Sbjct: 125 GYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVY 184
Query: 123 RFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEM 180
+I + +A+ +FN K I P I N L+ +L G++ K+ +++
Sbjct: 185 CTVISGFYEENYQVEAYELFN--KMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKV 242
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV-----IAVLIIHG 235
GV + F +FI C L S + E + M+N + II+G
Sbjct: 243 LKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYG 302
Query: 236 FCKGKRVEEAFKVLDELRIRE-----------------------------------CKPD 260
+ K ++++A ++L + + + KP
Sbjct: 303 YSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPS 362
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ Y + + G V + ++ K G++P Y I GL + +A L
Sbjct: 363 IVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLN 422
Query: 321 VIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
++ + D N LI G + +AI + M G P + T +++ LCK
Sbjct: 423 AAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAA 482
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K ++++E +K++ ++ +YN+++ LC + ++ EA +++E++ +GL PD +
Sbjct: 483 KPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFG 542
Query: 440 SLMEACCREDLLRPAKKLWDQMFAS-GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
+++ C L A +L+ +M + TYNI+I+ FSE +++ A +LFH M +
Sbjct: 543 TVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGD 602
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
KG PD+ TY +++G C+ N+ + ++ K +
Sbjct: 603 KGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEI 636
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 168/393 (42%), Gaps = 45/393 (11%)
Query: 173 ALKMFDEMSHR-GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR-KRENSMINGSVIAV 230
AL +F+ + G + + + + I K + + + +L E+R +NS++ G ++
Sbjct: 23 ALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYVSA 82
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+ +G KGK V+EA V + + C+P +Y + G + V + +
Sbjct: 83 MRNYGR-KGK-VQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHE 140
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
G+AP D F + + + C K P +A+
Sbjct: 141 GIAP---DVCTFTIRI---KSFCRTKR----------------------------PLAAL 166
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
N M +G + + N E E++ + F + ++N ++ L
Sbjct: 167 RLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHIL 226
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR-------PAKKLWDQMFA 463
C G L+E ++ ++ + G+ P++ +N ++ CR+ +L A+ +M
Sbjct: 227 CKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVN 286
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G + TYN +I +S+VG+I+ A R+ + KG PD TY SL+ G+CQ+ ++
Sbjct: 287 KGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDH 346
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
A +F +++ + + + +T + L ++ L+
Sbjct: 347 ALALFEEALGKGLKPSIVLYNTLIKGLSQQGLV 379
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 159/403 (39%), Gaps = 43/403 (10%)
Query: 72 NWASQQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSL 129
N+ + N P +Y++I+ S +I +LK K D Y +I +
Sbjct: 279 NYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGV 338
Query: 130 IQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
Q + A ++F E + + P I N+L+ L+ G + AL++ ++MS G+
Sbjct: 339 CQDGDIDHALALFEEAL--GKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSP 396
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRE--------NSMING--------SVIAVL 231
+ + I C+ + ++L+ + N++I+G + I +L
Sbjct: 397 DIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGIL 456
Query: 232 -----------------IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
I++G CK + E+ + + + C P+ I Y I+ E
Sbjct: 457 DSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKA 516
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV- 333
V E +L++ R G+ P + I G + EA +L + ++ I V
Sbjct: 517 RKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRM-EQQYRICHTVA 575
Query: 334 -LNALIGSVSS-IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
N +I + S +D A F+ M +KG P T + CK + +
Sbjct: 576 TYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKE 635
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
+ + ++ +++ LC R+ EA G++ M R G+ P+
Sbjct: 636 IEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPE 678
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 170/379 (44%), Gaps = 17/379 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L G I +AL +FD+M HRG S + + + + C+ + Q +++LDE+R
Sbjct: 255 NPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRA 314
Query: 218 R--ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ E ++ +V+ I+ C V+EA +L L CKPD + Y V + L G
Sbjct: 315 KGCEPDIVTYNVL----INAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLK--SLCG 368
Query: 276 SVFEREV--VLKKKRKLGVAPRTNDYREFILGL----IVERRICEAKELGEVIVSGKFTI 329
S +EV +L + AP + + L +V+R I + E
Sbjct: 369 SERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVT 428
Query: 330 DDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
+L+ L V +D A+ + + G P + + K LC + + E+
Sbjct: 429 YSSILDGLC-DVGRVD--DAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMA 485
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+ +D D ++N +V+ LC G + A V+++M G PD+ YN +++ C E
Sbjct: 486 EMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNES 545
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
+ A +L + + GC ++ T+N L+ V E A +L NM+ PD T+
Sbjct: 546 CIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFN 605
Query: 510 SLLEGLCQETNLQAAFEVF 528
+++ LCQ+ L A E
Sbjct: 606 TVITSLCQKGLLTQAIETL 624
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 179/410 (43%), Gaps = 21/410 (5%)
Query: 128 SLIQGKNTQKAFSVFNEVKF----NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR 183
SL+Q +A +F+ + NC + P CN L+ L SDG + +A ++F +
Sbjct: 159 SLVQRGEIDEALVLFDSMASGGGRNCPPVVP--CNILIKRLCSDGRVSDAERVFAAL--- 213
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G + + + + +C ++ +++ + ++ +I L + G R+
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRG-----RIP 268
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
+A V D++ R C P + Y I+ + + +L + R G P Y I
Sbjct: 269 DALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLI 328
Query: 304 LGLIVERRICEAKELGEVIVSGKFTID----DDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
+ E + EA + + S D VL +L GS + M
Sbjct: 329 NAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERW---KEVEELLAEMTSN 385
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
P T + + +LC++ D +EV +S + D+ +Y+ ++ LC GR+ +A
Sbjct: 386 NCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDA 445
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
++ +K G PD Y ++++ C + A++L +M S C + T+N +++
Sbjct: 446 VELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVAS 505
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ G ++ A+R+ M E G +PD TY +++GLC E+ + A E+ +
Sbjct: 506 LCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLS 555
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/499 (23%), Positives = 217/499 (43%), Gaps = 22/499 (4%)
Query: 33 LLEQTLHQLGLRDSLS--PSLVARVINPYLLTHHSLALGFFNWA---------SQQPNFT 81
LL+ T + G R +++ + A+ P ++T++ L N S P+
Sbjct: 292 LLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHG 351
Query: 82 HSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
P ++Y +LKSL S + ++ +L ++ N D + I+ SL Q +A
Sbjct: 352 CKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAI 411
Query: 140 SVFNEV-KFNC-EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
V + + + C DI +S+L L G +D+A+++ + G + TI + +
Sbjct: 412 EVVDHMSEHGCVADI--VTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLK 469
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
C + + ++ E+ + V ++ C+ V+ A +V++++ C
Sbjct: 470 GLCSTEQWERAEELMAEMLCSDCP--PDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGC 527
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
PD + Y + + + + +L + G P + + GL R +A++
Sbjct: 528 SPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQ 587
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
L ++ D+ N +I S+ + AI M E G VP ST S + L
Sbjct: 588 LMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALL 647
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K K+ +E+ ++ + D+ +YN ++S L +G++ EA +++ M GL PD +
Sbjct: 648 KAGKAQAALELLSGMT--NGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTT 705
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
Y SL CRED A ++ ++ +G S + YN ++ F + A+ F +M
Sbjct: 706 TYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHM 765
Query: 497 LEKGVAPDATTYTSLLEGL 515
+ G PD +TY LLE L
Sbjct: 766 VSSGCMPDESTYVILLEAL 784
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/512 (20%), Positives = 213/512 (41%), Gaps = 46/512 (8%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
F +++ ++++L + +I +V + + Y ++ + + ++A
Sbjct: 247 FPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAM 306
Query: 140 SVFNEVKF-NCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
++ +E++ CE P+I N L+ + ++G +D AL + + G + + + +
Sbjct: 307 ALLDEMRAKGCE---PDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVL 363
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C + + +V +L E+ N+ V I+ C+ V+ A +V+D +
Sbjct: 364 KSLCGSERWKEVEELLAEMTS--NNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHG 421
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C D + Y + + +G V + +L + + G P T Y + GL + A+
Sbjct: 422 CVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAE 481
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSS---IDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
EL ++ D+ N ++ S+ +D AI M E G P + T + +
Sbjct: 482 ELMAEMLCSDCPPDEVTFNTVVASLCQKGLVD--RAIRVVEQMSENGCSPDIVTYNCIID 539
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
LC + D+ +E+ L + D+ ++N ++ LC R +A ++ M R P
Sbjct: 540 GLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPP 599
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN------------------------ 469
D +N+++ + C++ LL A + M +GC N
Sbjct: 600 DELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELL 659
Query: 470 ---------LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
L TYN +IS ++ G++E AL L M+ G+ PD TTY SL G+C+E
Sbjct: 660 SGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDG 719
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A + + + + + + ++ CR
Sbjct: 720 TDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCR 751
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 164/401 (40%), Gaps = 50/401 (12%)
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVE--FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
L L G ID AL +FD M+ G + + I + C + ++ +R
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDA--------ER 208
Query: 219 ENSMINGSVIAVL---IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ + S V +++G+C+ R+E+A ++++ + PD + + + G
Sbjct: 209 VFAALGPSATVVTYNTMVNGYCRAGRIEDARRLINGMPF---PPDTFTFNPLIRALCVRG 265
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ + V G +P Y I+ C KE G
Sbjct: 266 RIPDALAVFDDMLHRGCSPSVVTYS------ILLDATC--KESGY--------------- 302
Query: 336 ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
R A+ + M KG P + T + L +C DE + + L ++
Sbjct: 303 -----------RQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHG 351
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D +Y ++ LC S R +E ++ EM PD +N+++ + C++ L+ A
Sbjct: 352 CKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAI 411
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
++ D M GC ++ TY+ ++ +VG ++ A+ L + G PD YT++L+GL
Sbjct: 412 EVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGL 471
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
C + A E+ + + D +T + SLC++ L+
Sbjct: 472 CSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLV 512
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 129/560 (23%), Positives = 247/560 (44%), Gaps = 53/560 (9%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
KW P E+ L L ++ + LV V+ + S+ + FF WA+++ N+ H +Y
Sbjct: 68 KWGPDAEKALEVLMMK--VDHWLVREVMKTDVGV--SVKMQFFRWAARKRNYEHDTSTYM 123
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSV-YRFIIPSLIQGKNTQKAFSVFNEVKF 147
++++ L + Q + +++++ N + + + + II L K KA ++F ++K
Sbjct: 124 ALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKA 183
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF-STIGFGVFIWKFCENAKLG 206
NS++ +L +G + ++++EMS+ G F T+ + I FC+ +
Sbjct: 184 RKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGRQD 243
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ +L+E+ ++N M + I +++ K V A + +E+R + C+PD Y
Sbjct: 244 SAIWLLNEM--KDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTE 301
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ G + E + R+ G P T I L R+ +A +L E + + +
Sbjct: 302 LIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLR 361
Query: 327 ----FTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS- 381
+ ++ AL S S + S+ +F M G P+ T S L CK N++
Sbjct: 362 CIPSVVTYNTIIKALFESKSRVSEISS--WFERMKGSGISPSPFTYSILIDGFCKTNRTE 419
Query: 382 -------------------------DELVEVYKVLSANDYFTDMES---------YNVMV 407
D L + + AN+ F +++ Y VM+
Sbjct: 420 KAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMI 479
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
L +GRL +A + EM R G P+V YN+LM R +L A +M GC
Sbjct: 480 KHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCI 539
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
++ +YNI+++ ++ G + A+ + NM + + PDA +Y ++L L + A ++
Sbjct: 540 PDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKL 599
Query: 528 FNK----SVNHDVMLARSIL 543
+ ++D++ SIL
Sbjct: 600 MKEMNAIGFDYDLITYSSIL 619
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 65/158 (41%), Gaps = 2/158 (1%)
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF-YNSLMEACCREDLLRP 453
+Y D +Y ++ L + E + +IQEM R + + ++ ++
Sbjct: 114 NYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISK 173
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA-PDATTYTSLL 512
A ++ Q+ A C YN +I GE E L++ M +G PD TY++L+
Sbjct: 174 AVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALI 233
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
C+ +A + N+ ++ + I + M L
Sbjct: 234 SAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALL 271
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 211/492 (42%), Gaps = 29/492 (5%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y++++ L ++ + VL++++ + D Y +I + + +KAF + +
Sbjct: 362 YNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMV 421
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
N N+LL S ID+AL+++ M RGV + I + + K
Sbjct: 422 RNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTE 481
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
Q L++ E R + + +I+G CK R+ EA ++LD ++ C PD + YR
Sbjct: 482 QALNLWKETLAR--GLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRT 539
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ + + +G + ++ K LG AP + FI G + ++ + ++ + +
Sbjct: 540 LFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARG 599
Query: 327 FTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE-- 383
+ + ALI G + A + M+ G P + S L K K DE
Sbjct: 600 LSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEAN 659
Query: 384 ------------------LVEVYKVLSANDYFTDMES------YNVMVSFLCTSGRLREA 419
+E+ K+ D D +NV++ LC SGR+ +A
Sbjct: 660 LVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADA 719
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ + ++ K PD Y+SL+ C + A L D M ++G + N+ TYN LI
Sbjct: 720 KSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYG 779
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ G++ A+ LF+ + KG++P+ TY +L++ C+E AF++ K V +
Sbjct: 780 LCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPT 839
Query: 540 RSILSTFMISLC 551
S + LC
Sbjct: 840 VITYSILIYGLC 851
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 180/396 (45%), Gaps = 41/396 (10%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL A G + +AL +FD M G S + K ++ G + ++R
Sbjct: 154 LLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIA- 212
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
++ ++ +C+ RV +A + ++E+ + + +AY V + + MG +
Sbjct: 213 -GVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTED 271
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALI 338
+L+ ++ G++P Y + G + R+ EA+ + E+ +G +D+
Sbjct: 272 ARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDE------- 324
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
V + MI C+R + D+ V +
Sbjct: 325 ------------VAYGMMI---------------NGYCQRGRMDDATRVRNEMRDAGIHV 357
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
++ YN M++ LC GR+ E V+QEM+ G+ PD YN+L++ CRE +R A ++
Sbjct: 358 NLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMC 417
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
M +G + TYN L+ F + I+ ALRL+ ML++GVAP+ + ++LL+GL +
Sbjct: 418 RMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKA 477
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILS--TFMISLCR 552
+ A ++ +++ LA+++++ T + LC+
Sbjct: 478 GKTEQALNLWKETLARG--LAKNVITFNTVINGLCK 511
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 181/428 (42%), Gaps = 71/428 (16%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
C++LL L G + AL ++ E RG+ + I F I C+ ++ + +LD R
Sbjct: 467 CSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLD--R 524
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD------FIAYRIVAEE 270
+E S+ + G+CK ++ A +++++ P FI +A++
Sbjct: 525 MKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQ 584
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS------ 324
+ + + + G++P Y I G E + EA L +V+
Sbjct: 585 WHKVNDIHS------EMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPN 638
Query: 325 --------------GKF----------------------TIDDDVLNALIGSVSSIDPRS 348
GK TI+ D ++ ++ +++ +P S
Sbjct: 639 VFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHS 698
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A V +N +I LCK + + +++ L + D +Y+ ++
Sbjct: 699 ANVMWNVII---------------FGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIH 743
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
SG + EA+ + M GL P++ YNSL+ C+ L A L++++ + G S
Sbjct: 744 GCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISP 803
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N TYN LI ++ + G+ A +L M+E+G+ P TY+ L+ GLC + ++ A ++
Sbjct: 804 NGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLL 863
Query: 529 NKSVNHDV 536
++ + ++V
Sbjct: 864 DQMIENNV 871
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/490 (23%), Positives = 220/490 (44%), Gaps = 26/490 (5%)
Query: 65 SLALGFFNW---ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV 121
S AL FF+ + +PN +++ +++ L +I ++L ++ + +
Sbjct: 166 SEALDFFHQMFETTCRPNV----VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT 221
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDE 179
Y I+ + + +T A ++ +++ I P I ++++ L DG +A +F E
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKME-EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCK 238
M +G+ + I FC + + +L E+ +R+ I+ V+ +I+ F K
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK---ISPDVVTYNALINAFVK 337
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+ EA ++ DE+ R P+ I Y + + F + E + G +P
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMI 357
+ I G +RI + EL + D N LI + D +A+ MI
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA-----------NDYFTDMESYNVM 406
G P + T L LC K + +E++KV+ N D+++YN++
Sbjct: 458 SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+S L G+ EA + +EM +G+ PD Y+S+++ C++ L A +++D M +
Sbjct: 518 ISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSF 577
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
S N+ T+ LI+ + + G ++ L LF M +G+ +A TY +L+ G + N+ A +
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALD 637
Query: 527 VFNKSVNHDV 536
+F + ++ V
Sbjct: 638 IFQEMISSGV 647
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 167/383 (43%), Gaps = 4/383 (1%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D + ++ +M + + F + I FC +KL LS ++ K + V
Sbjct: 96 DLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKL--GLHPDVVTFT 153
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++HG C RV EA ++ C+P+ + + + G + E +L + +
Sbjct: 154 TLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED 213
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL-NALIGSVSSIDPRS- 348
G+ P Y + G+ + A L + I + V+ +A+I S+ S
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A F M EKG P L T +++ C + + ++ + + D+ +YN +++
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
G+ EA + EM +G+ P+ Y+S+++ C+++ L A+ ++ M GCS
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
NL T+N LI + I+ + L H M E G+ D TTY +L+ G +L AA ++
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 529 NKSVNHDVMLARSILSTFMISLC 551
+ ++ + T + LC
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLC 476
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 173/409 (42%), Gaps = 50/409 (12%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
+L+ L +G I A+ + D M G++ + I +G + C K G +S L+ +RK
Sbjct: 188 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC---KKGDTVSALNLLRK 244
Query: 218 RE--NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E + +I VI II CK R +A + E++ + PD Y + F G
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG 304
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ E +L++ + ++P Y I + E + EA+EL
Sbjct: 305 RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEEL----------------- 347
Query: 336 ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
++ M+ +G +P T S++ CK+N+ D ++ +++
Sbjct: 348 -----------------YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
++ ++N ++ C + R+ + ++ EM GL D + YN+L+ L A
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAAL 450
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE-----------KGVAPD 504
L +M +SG ++ T + L+ + G+++ AL +F M + GV PD
Sbjct: 451 DLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPD 510
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
TY L+ GL E A E++ + + ++ S+ + LC++
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 166/393 (42%), Gaps = 51/393 (12%)
Query: 152 IGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
I P++ N+L+ +G A +++DEM RG+ +TI + I FC+ +L
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
M + + S + +I G+C KR+++ ++L E+ D Y +
Sbjct: 381 HMFYLMATKGCS--PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
F L+G + +L++ G+ P + GL ++ +A E+ +V+ K +
Sbjct: 439 GFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL 498
Query: 330 D---------DDV--LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
D DV N LI G ++ A + M +G VP T S++ LCK
Sbjct: 499 DASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+++ DE +++ + + + ++ ++ +++ C +GR+ + + EM R+G+
Sbjct: 559 QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI------ 612
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
N TY LI F +VG I GAL +F M+
Sbjct: 613 -----------------------------VANAITYITLICGFRKVGNINGALDIFQEMI 643
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
GV PD T ++L GL + L+ A + K
Sbjct: 644 SSGVYPDTITIRNMLTGLWSKEELKRAVAMLEK 676
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 113/269 (42%), Gaps = 35/269 (13%)
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID 345
K KLG+ P + + GL VE R+ EA +
Sbjct: 139 KITKLGLHPDVVTFTTLLHGLCVEDRVSEALD---------------------------- 170
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
FF+ M E P + T + L LC+ + E V + + + +Y
Sbjct: 171 ------FFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 406 MVSFLCTSGRLREAYGVIQEMKR-KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
+V +C G A ++++M+ + P+V Y++++++ C++ A+ L+ +M
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G +L TYN +I F G A +L MLE+ ++PD TY +L+ +E A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 525 FEVFNKSVNHDVMLARSILSTFMISLCRR 553
E++++ + ++ S+ + C++
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQ 373
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 85/205 (41%), Gaps = 35/205 (17%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F+ M+ +P++ L + + + D ++ +Y+ + D+ S+N+++
Sbjct: 63 AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C+ +L A ++ + GL PDV + +L+ C ED
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVED------------------- 163
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ SE AL FH M E P+ T+T+L+ GLC+E + A +
Sbjct: 164 ----------RVSE------ALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207
Query: 529 NKSVNHDVMLARSILSTFMISLCRR 553
++ + + + T + +C++
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKK 232
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 198/469 (42%), Gaps = 9/469 (1%)
Query: 69 GFFNWASQ------QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVY 122
G+F+ A + T S+ +KS + + +A +L + ++ Y
Sbjct: 125 GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAY 184
Query: 123 RFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSH 182
++ + + + +F ++ + + N LL VL G + K+ D++
Sbjct: 185 CTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIK 244
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRV 242
RGV + + FI C+ +L + M+ R + V +I+G CK +
Sbjct: 245 RGVLPNLFTYNFFIQGLCQKGELDAAVRMVG--RLIDQGPKPDVVTYNYLIYGLCKNSKF 302
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
+EA L +L +PD Y + + G V E +L G P YR
Sbjct: 303 QEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSL 362
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGR 361
I GL E A L + + + N LI +S+ A + M EKG
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGL 422
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
+P + T + L LCK + + KV+ + YF D+ ++N+++ T ++ A
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
++ M G+DPDV YNSL+ C+ + + M GC+ NL T+NIL+
Sbjct: 483 ILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLC 542
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+++ AL L M K V PDA T+ +L++G C+ +L A+ +F K
Sbjct: 543 RYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 129/529 (24%), Positives = 222/529 (41%), Gaps = 51/529 (9%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVN-KITLDSSVYRFI 125
AL FN ++ F H+ +Y SI++ L L + A++ VL ++ N + VY
Sbjct: 23 ALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGA 82
Query: 126 IPSLIQGKNTQKAFSVFNEVKF-NCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSH 182
+ + + Q+A +VF + F +CE P + N+++++L GY D A K++ M
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCE---PTVFSYNAIMSILVDSGYFDQAHKVYMRMRD 139
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSML-----------------------DEVRKRE 219
RG+ F + + FC ++ L +L +E K E
Sbjct: 140 RGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDE 199
Query: 220 NSMINGSVIAVLI----------IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+ G ++A + +H CK V+E K+LD++ R P+ Y +
Sbjct: 200 GYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQ 259
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK-ELGEVIVSG--- 325
G + ++ + G P Y I GL + EA+ LG+++ G
Sbjct: 260 GLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEP 319
Query: 326 -KFTIDDDVLNALIGSVSSIDPRSAI-VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
FT + + G + + R + FN G VP T +L LC +++
Sbjct: 320 DSFTYNTLIAGYCKGGMVQLAERILVNAVFN-----GFVPDEFTYRSLIDGLCHEGETNR 374
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ ++ ++ YN ++ L G + EA + EM KGL P+V +N L+
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVN 434
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C+ + A L M + G ++ T+NILI +S ++E AL + M++ GV P
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDP 494
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
D TY SLL GLC+ + + E + V + + SLCR
Sbjct: 495 DVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/478 (21%), Positives = 214/478 (44%), Gaps = 24/478 (5%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+++ +L L + + +L +V + + Y F I L Q A + +
Sbjct: 218 TFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRL 277
Query: 146 KFNCEDIGPE----ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
D GP+ N L+ L + A ++ + G+E + + I +C+
Sbjct: 278 I----DQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCK 333
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDELRIREC 257
G ++ + + R N++ NG V +I G C A + +E +
Sbjct: 334 ----GGMVQLAE--RILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
KP+ I Y + + G + E + + + G+ P + + GL + +A
Sbjct: 388 KPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447
Query: 318 LGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
L +V++S + D N LI G + + +A+ + M++ G P + T ++L LC
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLC 507
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K +K ++++E YK + ++ ++N+++ LC +L +A G+++EMK K ++PD
Sbjct: 508 KTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAV 567
Query: 437 FYNSLMEACCREDLLRPAKKLWDQM---FASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+ +L++ C+ L A L+ +M + CS TYNI+I F+E + A +LF
Sbjct: 568 TFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCS--TPTYNIIIHAFTEKLNVTMAEKLF 625
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
M+++ + PD TY +++G C+ N+ ++ + + + + + + L + LC
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLC 683
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 162/387 (41%), Gaps = 5/387 (1%)
Query: 173 ALKMFDEM-SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR-ENSMINGSVIAV 230
AL+MF+ M G + + + I K K + +L ++R+ N M+ G +
Sbjct: 23 ALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGA 82
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+ +G KGK V+EA V + + +C+P +Y + G + V + R
Sbjct: 83 MKNYGR-KGK-VQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDR 140
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-A 349
G+ P + + R A L + S ++ ++G + +
Sbjct: 141 GITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEG 200
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F M+ G LST + L LCK+ E ++ + ++ +YN +
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQG 260
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC G L A ++ + +G PDV YN L+ C+ + A+ ++ G +
Sbjct: 261 LCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPD 320
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
TYN LI+ + + G ++ A R+ N + G PD TY SL++GLC E A +FN
Sbjct: 321 SFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFN 380
Query: 530 KSVNHDVMLARSILSTFMISLCRRVLI 556
+++ + + +T + L + LI
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGLI 407
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 196/450 (43%), Gaps = 5/450 (1%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S + + +L S++ + + + S+ KQ+ I ++ +I S AFSV
Sbjct: 53 SIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVL 112
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ +L+ L +G I AL++FD+M+ G + + +G I C
Sbjct: 113 GDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLC-- 170
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
K+G + + +R E +V+ II CK +++ EA + ++ + P+
Sbjct: 171 -KVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNN 229
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
Y + ++G E + + P + + L E + +A + +V
Sbjct: 230 FTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDV 289
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
++ D N+L+ G + + F+ M+ KG VP++ + + L CK
Sbjct: 290 MIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQI 349
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
D+ + +++ +S D +YN ++ LC GRLR+A + EM G PD+ Y
Sbjct: 350 MDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRI 409
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L + C+ L A L + + ++ Y+I++ GE+E A LF + KG
Sbjct: 410 LFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG 469
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ PD TYT ++ GLCQ+ L A ++F +
Sbjct: 470 LHPDVRTYTIMINGLCQQGLLAEASKLFGE 499
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 194/444 (43%), Gaps = 9/444 (2%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
+ S ++ ++++ L + +I + ++ D Y +I L + NT A
Sbjct: 119 GYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTA 178
Query: 139 FSVFNEV-KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
+ + NC P + ++++ L D + AL +F +M +G+ + +
Sbjct: 179 IRFLRSMEQRNCR---PTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSL 235
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
I C + + + + R+ ++ + ++ CK V +A V+D +
Sbjct: 236 IHGLCILGHWKEAIRLFYAMIHRK--IMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQS 293
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
+ KPD + Y + + L + + V + G P Y I G + + +A
Sbjct: 294 DLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKA 353
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
L E + D N LI + + R AI F+ M+ G++P L T L
Sbjct: 354 MGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDY 413
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK ++ E + + KV+ + D+ Y++++ +C +G L A + ++ KGL PD
Sbjct: 414 LCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPD 473
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V Y ++ C++ LL A KL+ +M +GCS N TYN++ F E A++LF
Sbjct: 474 VRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQ 533
Query: 495 NMLEKGVAPDATTYTSLLEGLCQE 518
ML +G + D +T T L+E L +
Sbjct: 534 EMLSRGFSIDVSTTTLLVEMLSDD 557
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 155/373 (41%), Gaps = 36/373 (9%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL + + L ++ +M G+ +T + I FC +LG S+L ++ K
Sbjct: 60 LLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLG 119
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+ +I G C ++ EA ++ D++ +PD + Y + +G+
Sbjct: 120 YQPSTATFTT--LIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTST 177
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
L+ + P Y I L +R++ EA L
Sbjct: 178 AIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSL--------------------- 216
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
F+ M+ KG P T S+L LC E + ++ + D
Sbjct: 217 -------------FSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPD 263
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
++N +V LC G + +A+ V+ M + L PDV YNSLM+ C + ++D
Sbjct: 264 QLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFD 323
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
M GC ++ +Y LI+ + ++ ++ A+ LF M ++G+ PD TY +L+ GLC
Sbjct: 324 TMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVG 383
Query: 520 NLQAAFEVFNKSV 532
L+ A +F++ V
Sbjct: 384 RLRDAIALFHEMV 396
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 158/384 (41%), Gaps = 38/384 (9%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
ID+AL +F+ M S + F + VLS+ ++ + + +
Sbjct: 35 IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSF--GIPHNTYTL 92
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
++I+ FC R+ AF VL ++ K
Sbjct: 93 NILINSFCHLNRLGFAFSVLGDIL-----------------------------------K 117
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRS 348
LG P T + I GL VE +I EA +L + + F D LI + + + +
Sbjct: 118 LGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTST 177
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F M ++ PT+ S + +LCK + E + ++ + A + +Y+ ++
Sbjct: 178 AIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIH 237
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G +EA + M + + PD +N+L++A C+E ++ A + D M S
Sbjct: 238 GLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKP 297
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TYN L+ E+ + +F M+ KG P +YT+L+ G C+ + A +F
Sbjct: 298 DVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLF 357
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
+ ++ +T + LC
Sbjct: 358 EEMSQQGLIPDTVTYNTLIHGLCH 381
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 162/369 (43%), Gaps = 11/369 (2%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFD 178
VY II SL + + +A S+F+++ + I P +SL+ L G+ A+++F
Sbjct: 196 VYSTIIDSLCKDRQLTEALSLFSDML--AKGISPNNFTYSSLIHGLCILGHWKEAIRLFY 253
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
M HR + + F + C+ + + ++D + + + + V ++ G C
Sbjct: 254 AMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSD--LKPDVVTYNSLMDGHCL 311
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+ + V D + + C P I+Y + + + + + + ++ + G+ P T
Sbjct: 312 RSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVT 371
Query: 299 YREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFNF 355
Y I GL R+ +A L E++V G+ I D V ++ + R A+V
Sbjct: 372 YNTLIHGLCHVGRLRDAIALFHEMVVYGQ--IPDLVTYRILFDYLCKNHRLAEAMVLLKV 429
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
+ P + S + +C+ + + +++ LS+ D+ +Y +M++ LC G
Sbjct: 430 IEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGL 489
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L EA + EM G P+ YN + R + A +L+ +M + G S ++ T +
Sbjct: 490 LAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTL 549
Query: 476 LISKFSEVG 484
L+ S+ G
Sbjct: 550 LVEMLSDDG 558
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 114/252 (45%), Gaps = 37/252 (14%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+V++ID A+ FN M+ P++ S L ++ + ++ +YK + + +
Sbjct: 31 NVNTID--DALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHN 88
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ N++++ C RL A+ V+ ++ + G P + + +L+ C E + A +L+D
Sbjct: 89 TYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFD 148
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALR---------------------------- 491
+M G ++ TY LI+ +VG A+R
Sbjct: 149 KMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDR 208
Query: 492 -------LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILS 544
LF +ML KG++P+ TY+SL+ GLC + + A +F ++ +M + +
Sbjct: 209 QLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFN 268
Query: 545 TFMISLCRRVLI 556
T + +LC+ ++
Sbjct: 269 TLVDALCKEGMV 280
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 169/394 (42%), Gaps = 15/394 (3%)
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
F + +Q N + + Y +I+ SL RQ+ S+ + I+ ++ Y +I L
Sbjct: 181 FLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLC 240
Query: 131 QGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFS 188
+ ++A +F + I P+ N+L+ L +G + A + D M ++
Sbjct: 241 ILGHWKEAIRLFYAMIH--RKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPD 298
Query: 189 TIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL----IIHGFCKGKRVEE 244
+ + + C +++G+ +++ D + ++ G V +V+ +I+G+CK + +++
Sbjct: 299 VVTYNSLMDGHCLRSEMGKTVNVFDTMVRK------GCVPSVISYTTLINGYCKIQIMDK 352
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A + +E+ + PD + Y + +G + + + + G P YR
Sbjct: 353 AMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFD 412
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVP 363
L R+ EA L +VI D + + ++ G + + +A F+ + KG P
Sbjct: 413 YLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHP 472
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ T + + LC++ E +++ + N + +YN++ + A +
Sbjct: 473 DVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLF 532
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
QEM +G DVS L+E + L + K++
Sbjct: 533 QEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQI 566
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 131/554 (23%), Positives = 241/554 (43%), Gaps = 58/554 (10%)
Query: 26 PARKWTPL-LEQTLHQLGLRDSLSPSLVARVINPYLLTHHS---------------LALG 69
P +K L L+ L Q LR SPS + ++ LTH +AL
Sbjct: 82 PLKKICSLVLDTYLRQPHLR--FSPSKLNLDMDAASLTHEQAISAVALLASEEGSMVALS 139
Query: 70 FFNWASQQPNFTHSPLSYHSILKSLSLSRQIN-----------------------AIDSV 106
FF WA P F + Y I+ ++SL + N A+D +
Sbjct: 140 FFYWAVGFPKFRYFMRLY--IVCTMSLVGKCNLERAHEVVECMVGVFAEIGKLKEAVDMI 197
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS--LLAVL 164
L ++ + L + V II + + + A +VF+E+ + + P+ C ++
Sbjct: 198 L-DMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEM--SARGVYPDSCTYKYIIVGY 254
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS--M 222
+G + A + EM RG + I FCE + + + + +V K S +
Sbjct: 255 CRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNL 314
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER-- 280
IN S + I G CK V++AF++L+E+ KP+ + + G ER
Sbjct: 315 INYSSM----ISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWT-ERAF 369
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-G 339
+ LK R P + Y I G E ++ A+ L E + + + LI G
Sbjct: 370 RLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDG 429
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ + A M +G P T +++ LCKR +++E ++ N D
Sbjct: 430 HCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEAD 489
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+Y +++S C + +A + +M + G PD+ Y +L+ A CR+++++ ++KL+D
Sbjct: 490 GVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFD 549
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
++ G + +TY +I + ++ A++ F M + G APD+ +Y +L+ GLC+E+
Sbjct: 550 EVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKES 609
Query: 520 NLQAAFEVFNKSVN 533
L A ++++ ++
Sbjct: 610 RLDEARQLYDTMID 623
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 156/359 (43%), Gaps = 43/359 (11%)
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
F E KL + + M+ ++R + ++ + + II + + VE A V DE+ R
Sbjct: 184 FAEIGKLKEAVDMILDMRNQ--GLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVY 241
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD Y+ + + G+V E +R ICE E
Sbjct: 242 PDSCTYKYIIVGYCRNGNVLE----------------------------ADRWICEMMER 273
Query: 319 GEVIVSGKFTIDDDVLNALIGSV--SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
G F +D+ L +I + S+ R A+ FF+ + + G P L S++ LC
Sbjct: 274 G-------FVVDNATLTLIITAFCEKSLVNR-AVWFFHKVTKMGLSPNLINYSSMISGLC 325
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK-GLDPDV 435
KR + E+ + + N + ++ ++ ++ LC G A+ + ++ R P+V
Sbjct: 326 KRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNV 385
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y +++ C+E+ L A+ L+++M G N TY LI + G A L
Sbjct: 386 HTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMEL 445
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS-LCRR 553
M +G P+ TY S+++GLC+ + AF++ N + + A + T +IS C+R
Sbjct: 446 MSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIE-ADGVTYTILISEQCKR 503
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 98/486 (20%), Positives = 188/486 (38%), Gaps = 42/486 (8%)
Query: 98 RQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC 157
R + +V ++ + DS Y++II + N +A E+ +
Sbjct: 223 RLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATL 282
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
++ ++ A+ F +++ G+ + I + I C+ + Q +L+E+ K
Sbjct: 283 TLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVK 342
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKV-LDELRIRECKPDFIAYRIVAEEFKLMGS 276
N +IHG CK E AF++ L +R KP+ Y + +
Sbjct: 343 --NGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEK 400
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ E++ ++ ++ G+ P TN Y I G +A EL E++ + F + N+
Sbjct: 401 LSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNS 460
Query: 337 LI---------------------------GSVSSI---------DPRSAIVFFNFMIEKG 360
++ G +I D A+VF N M + G
Sbjct: 461 IVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVG 520
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P + + L C++N + +++ + E+Y M+ C ++ A
Sbjct: 521 FQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAV 580
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
Q+M G PD Y +L+ C+E L A++L+D M G S T L ++
Sbjct: 581 KFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEY 640
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
+ + A+ + + +K T +L+ LC E + A F+K ++ +V + R
Sbjct: 641 CKTEDFASAMVILERLNKKLW---IRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDR 697
Query: 541 SILSTF 546
L+ F
Sbjct: 698 VTLAAF 703
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/478 (23%), Positives = 220/478 (46%), Gaps = 17/478 (3%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQ-VKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
+T++PL + ++ ++ +D +L++ + N +T Y ++ ++ + ++A
Sbjct: 143 YTYTPL-IRVLCDRGRVADALSLLDDMLRRGCQPNVVT-----YTVLLEAMCKNSGFEQA 196
Query: 139 FSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+V +E++ + P I N ++ + +G +D+A + + + G + T+ + +
Sbjct: 197 MAVLDEMR--AKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLL 254
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C + + V + E+ ++ N M N V ++I FC+G VE A +VL ++ E
Sbjct: 255 KGLCASKRWDDVEELFAEMMEK-NCMPN-EVTFDMLIRFFCRGGMVERAIQVLQQMTEHE 312
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C + IV G V + L G P T Y + GL R +AK
Sbjct: 313 CATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAK 372
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
EL + +V ++ N I + AI+ M E G + T + L
Sbjct: 373 ELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGF 432
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C + D +E+++ + + +Y +++ LC + RL A ++ EM + P+V
Sbjct: 433 CVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNV 489
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
+N L+ C++ L A +L +QM GC+ NL TYN L ++ E AL L H
Sbjct: 490 VTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHG 549
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
++ KGV+PD T++S++ L +E ++ A ++F+ + + + + + ++ LC+R
Sbjct: 550 LVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKR 607
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 159/371 (42%), Gaps = 39/371 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+A G++D A ++ M V + I C+ ++ LS+LD++ +
Sbjct: 114 NTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLR 170
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R V +++ CK E+A VLDE+R + C P+ + Y ++ G V
Sbjct: 171 R--GCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRV 228
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ +L + G P T Y + GL +R + +EL
Sbjct: 229 DDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEEL------------------- 269
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
F M+EK +P T L + C+ + ++V + ++ ++
Sbjct: 270 ---------------FAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECA 314
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
T+ N++++ +C GR+ +A+ + M G +PD Y ++++ CR + AK+L
Sbjct: 315 TNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKEL 374
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+M + C N T+N I + G IE A+ L M E G TY +L+ G C
Sbjct: 375 LKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCV 434
Query: 518 ETNLQAAFEVF 528
+ ++ +A E+F
Sbjct: 435 QGHIDSALELF 445
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 113/486 (23%), Positives = 216/486 (44%), Gaps = 20/486 (4%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN ++Y +L+++ + +VL +++ T + Y II + +
Sbjct: 174 QPNV----VTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 229
Query: 137 KAFSVFNEV-KFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
A + N + + C+ P+ + +LL L + D+ ++F EM + + + F
Sbjct: 230 DARDLLNRLFSYGCQ---PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFD 286
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
+ I FC + + + +L ++ + E + + + ++I+ CK RV++AFK L+ +
Sbjct: 287 MLIRFFCRGGMVERAIQVLQQMTEHECA--TNTTLCNIVINSICKQGRVDDAFKFLNNMG 344
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
C PD I+Y V + + + +LK+ + P + FI L + I
Sbjct: 345 SYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIE 404
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
+A L E + T+ NAL+ ID SA+ F M K P T +
Sbjct: 405 QAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHID--SALELFRSMPCK---PNTITYTT 459
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LC + D E+ + D ++ ++NV+V+F C G L EA ++++M G
Sbjct: 460 LLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHG 519
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
P++ YN+L + ++ A +L + + G S ++ T++ +I S+ +E A+
Sbjct: 520 CTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAI 579
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
++FH + G+ P A Y +L GLC+ + A + V++ M S + L
Sbjct: 580 QMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGL 639
Query: 551 CRRVLI 556
R L+
Sbjct: 640 AREGLL 645
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 32/225 (14%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS----------- 408
G P + + L +NLC+R ++ + V + + D+ +YN +V+
Sbjct: 70 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 129
Query: 409 ---------------------FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
LC GR+ +A ++ +M R+G P+V Y L+EA C+
Sbjct: 130 RRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCK 189
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
A + D+M A GC+ N+ TYN++I+ G ++ A L + + G PD +
Sbjct: 190 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVS 249
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
YT+LL+GLC E+F + + + M + CR
Sbjct: 250 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCR 294
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 137/326 (42%), Gaps = 4/326 (1%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I C+ R +A +VL D AY + + G + + + +
Sbjct: 81 LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHL---DAARRLIGSMP 137
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAI 350
VAP Y I L R+ +A L + ++ + L+ ++ A+
Sbjct: 138 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAM 197
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ M KG P + T + + +C+ + D+ ++ L + D SY ++ L
Sbjct: 198 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGL 257
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C S R + + EM K P+ ++ L+ CR ++ A ++ QM C+ N
Sbjct: 258 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNT 317
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
NI+I+ + G ++ A + +NM G PD +YT++L+GLC+ A E+ +
Sbjct: 318 TLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKE 377
Query: 531 SVNHDVMLARSILSTFMISLCRRVLI 556
V ++ +TF+ LC++ LI
Sbjct: 378 MVRNNCPPNEVTFNTFICILCQKGLI 403
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
R G PDV L+ CR A ++ SG ++ YN L++ + G ++
Sbjct: 68 RDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLD 127
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
A RL +M VAPDA TYT L+ LC + A + +
Sbjct: 128 AARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLD 166
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 179/406 (44%), Gaps = 47/406 (11%)
Query: 130 IQGKNTQKAFSVFNEVKFNCE----DIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
++G+ T+ + VK+ CE GP +L + G AL +F +M R +
Sbjct: 186 LKGRVTEALVLIDRMVKYGCEANEITYGP-----VLNRMCKSGNTALALDLFRKMEERSI 240
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-IIHGFCKGKRVEE 244
+ S + + + I C++ L LS+ +E+ E I V+A II G C R ++
Sbjct: 241 KASVVQYSIVIDSLCKDGNLDDALSLFNEM---EMKGIKADVVAYSSIIGGLCNDGRWDD 297
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
K+L E+ R P+ + + + + F G + E + + + G+AP T Y I
Sbjct: 298 GAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLID 357
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT 364
G E R+ EA ++ + M+ KG P
Sbjct: 358 GFCKENRLGEANQM----------------------------------LDLMVSKGCEPN 383
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
+ T S L + CK + D + ++ +S+ D +YN +V C SG+L A + Q
Sbjct: 384 IVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQ 443
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
EM +G+ P V Y L++ C L+ A +++++M S + YNI+I
Sbjct: 444 EMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNAS 503
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+++ A LF ++ KGV PD TY ++ GLC++ +L A +F K
Sbjct: 504 KVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRK 549
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 175/389 (44%), Gaps = 25/389 (6%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR- 218
L + +A D L EM G+E + + I FC KL S++ K
Sbjct: 75 LFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFG 134
Query: 219 -ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E + I S + I+GFC RV EA ++D + + +P+ + + L G V
Sbjct: 135 FEPNTITFSTL----INGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRV 190
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFI----------LGLIVERRICEAKELGEVIVSGKF 327
E V++ + K G Y + L L + R++ E + + +V
Sbjct: 191 TEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKM-EERSIKASVVQYSI 249
Query: 328 TIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
ID + ++D A+ FN M KG + S++ LC + D+ ++
Sbjct: 250 VIDS------LCKDGNLD--DALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKM 301
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
+ + + ++ +++ ++ G+L EA + EM +G+ PD Y+SL++ C+
Sbjct: 302 LREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCK 361
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
E+ L A ++ D M + GC N+ TY+ILI+ + + ++ +RLF + KG+ D T
Sbjct: 362 ENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVT 421
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
Y +L++G CQ L A E+F + V+ V
Sbjct: 422 YNTLVQGFCQSGKLNVAKELFQEMVSRGV 450
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 179/423 (42%), Gaps = 36/423 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +L + S + ++++ I Y +I SL + N A S+FNE
Sbjct: 210 ITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNE 269
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ +S++ L +DG D+ KM EM R + + + F I F + K
Sbjct: 270 MEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGK 329
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + + +E+ R + ++ +I GFCK R+ EA ++LD + + C+P+ + Y
Sbjct: 330 LLEAKELYNEMVAR--GIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTY 387
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
I+ + V + + G+ T Y + G ++ AKEL
Sbjct: 388 SILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKEL------ 441
Query: 325 GKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
F M+ +G P++ T L LC + +
Sbjct: 442 ----------------------------FQEMVSRGVPPSVVTYGILLDGLCDNGELQKA 473
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+E+++ + + + YN+++ +C + ++ +A+ + + KG+ PDV YN ++
Sbjct: 474 LEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGG 533
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C++ L A L+ +M GC+ + TYNILI + ++ L M +G A D
Sbjct: 534 LCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAAD 593
Query: 505 ATT 507
A+T
Sbjct: 594 AST 596
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 163/373 (43%), Gaps = 11/373 (2%)
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLD---EVRKRENSMINGSVIAVLIIHGFCKGK 240
G E +TI F I FC ++ + ++++D E++ R N V +I+G C
Sbjct: 134 GFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNV-----VTVNTLINGLCLKG 188
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
RV EA ++D + C+ + I Y V G+ + +K + + Y
Sbjct: 189 RVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYS 248
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFNFMIE 358
I L + + +A L + D +++IG + + D R MI
Sbjct: 249 IVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCN-DGRWDDGAKMLREMIG 307
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
+ +P + T S L K K E E+Y + A D +Y+ ++ C RL E
Sbjct: 308 RNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGE 367
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A ++ M KG +P++ Y+ L+ + C+ + +L+ ++ + G + TYN L+
Sbjct: 368 ANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQ 427
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
F + G++ A LF M+ +GV P TY LL+GLC LQ A E+F K ++L
Sbjct: 428 GFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMIL 487
Query: 539 ARSILSTFMISLC 551
I + + +C
Sbjct: 488 GIGIYNIIIHGMC 500
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 113/258 (43%), Gaps = 28/258 (10%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAID-S 105
L +VAR I P +T+ SL GF K L +D
Sbjct: 336 LYNEMVARGIAPDTITYSSLIDGF--------------------CKENRLGEANQMLDLM 375
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLA 165
V K + N +T Y +I S + K +F E+ N+L+
Sbjct: 376 VSKGCEPNIVT-----YSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFC 430
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMING 225
G ++ A ++F EM RGV S + +G+ + C+N +L + L + ++++K + MI G
Sbjct: 431 QSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQK--SRMILG 488
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
I +IIHG C +V++A+ + L ++ KPD + Y ++ GS+ E +++ +
Sbjct: 489 IGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFR 548
Query: 286 KKRKLGVAPRTNDYREFI 303
K ++ G AP Y I
Sbjct: 549 KMKEDGCAPSDCTYNILI 566
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ I AI F MI+ +P+L S L + +R + D ++ K + N +
Sbjct: 44 GIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHN 103
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
M + N+M++ C +L A+ V+ + G +P+ +++L+ C E + A L D
Sbjct: 104 MYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVD 163
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M N+ T N LI+ G + AL L M++ G + TY +L +C+
Sbjct: 164 RMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSG 223
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
N A ++F K + + S + SLC+
Sbjct: 224 NTALALDLFRKMEERSIKASVVQYSIVIDSLCK 256
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 115/271 (42%), Gaps = 36/271 (13%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
V+ + K G P T + I G +E R+ EA L + +V K+ + +N LI
Sbjct: 126 VVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLI---- 181
Query: 343 SIDPRSAIVFFNFMIEKGRVP-TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
N + KGRV L + + K C+ N+
Sbjct: 182 -----------NGLCLKGRVTEALVLIDRMVKYGCEANEI-------------------- 210
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y +++ +C SG A + ++M+ + + V Y+ ++++ C++ L A L+++M
Sbjct: 211 TYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEM 270
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G ++ Y+ +I G + ++ M+ + + P+ T+++L++ +E L
Sbjct: 271 EMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKL 330
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A E++N+ V + S+ + C+
Sbjct: 331 LEAKELYNEMVARGIAPDTITYSSLIDGFCK 361
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 205/473 (43%), Gaps = 45/473 (9%)
Query: 66 LALGFFNWASQ-QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
LAL F +A + P FTH+ +YHSIL LS +R + ++S++ ++ + + F
Sbjct: 62 LALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLF 121
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE----ICNSLLAVLASDGYIDNALKMFDEM 180
I L++ + + D G + N+LL VL + D MF
Sbjct: 122 I--DLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNS 179
Query: 181 SHR-GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
G+ + + + C+ + +LDE+ ++ V I+ G+
Sbjct: 180 KESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAM--GLVPNLVTYTTILGGYVAR 237
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+E A +VL+E+ R PD I Y ++ + + +G E V+ K + P
Sbjct: 238 GDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPN---- 293
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
E G+++ R +C+ K+ GE A F+ M+++
Sbjct: 294 -EVTYGVMI-RALCKEKKSGE----------------------------ARNMFDEMLDR 323
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
+P S + LC+ +K DE +++ + N+ D + ++ +LC GR+ EA
Sbjct: 324 SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEA 383
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ E KG P + YN+L+ C + L A +LWD MF C N TYN+LI
Sbjct: 384 RKLFDEFD-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEG 442
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
S+ G ++ +R+ MLE G P+ TT+ L EGL + + A ++ + +V
Sbjct: 443 LSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAV 495
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 90/193 (46%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P + T + L K LCK+N + +V + A ++ +Y ++ G + A
Sbjct: 184 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESA 243
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
V++EM +G PD Y LM+ C+ A + D M + N TY ++I
Sbjct: 244 KRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 303
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ + A +F ML++ PD++ +++ LC++ + A ++ K + ++ M
Sbjct: 304 LCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 363
Query: 540 RSILSTFMISLCR 552
++LST + LC+
Sbjct: 364 NALLSTLIHWLCK 376
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/472 (22%), Positives = 215/472 (45%), Gaps = 11/472 (2%)
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
+L SL + ++ V + + I D ++ +I + +G A +F+++
Sbjct: 227 LLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKM---- 282
Query: 150 EDIG--PEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
E +G P + N+++ L G +D A + ++M V S I + VFI + K+
Sbjct: 283 EKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKI 342
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ +L E+ E + V+ +I G+CK + EA K+ D++ + P+ +
Sbjct: 343 DEANCVLKEMS--ELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLN 400
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + F + + E VL++ G+ + I L ++ R A ++
Sbjct: 401 SLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLR 460
Query: 326 KFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+D +L L+ + + A+ + ++ KG VP + T + L LCK E
Sbjct: 461 NLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQET 520
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+++ + + D +YN ++S C G+++E + + +EM +KG+ PD+ +N L+
Sbjct: 521 LKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHG 580
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C D + A +LW + +G N+ TY ++I + + ++E L + ++ K + +
Sbjct: 581 LCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELN 640
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+ Y SL+ C N+ AAF + + + V+L+ + S+ M LC L+
Sbjct: 641 SVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLV 692
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/545 (21%), Positives = 226/545 (41%), Gaps = 50/545 (9%)
Query: 51 LVARVINPYLLTH-HSLALGFFNWASQ---QPNFTHSPLSYHSILKSLSLSRQINAIDSV 106
L + +IN + H A+G F+ + PN ++Y++I+ L S +++
Sbjct: 258 LFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNV----VTYNNIIHGLCKSGRLDEAYRF 313
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PE--ICNSLLA 162
+++ K++ Y I LI+ + +A V E+ ++G P + N+L+
Sbjct: 314 KEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEM----SELGFVPNEVVYNTLID 369
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
G I ALK+ D+M +G+ +++ I FC++ ++GQ ++L+E+ R +
Sbjct: 370 GYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPI 429
Query: 223 INGSVIAVL---------------------------------IIHGFCKGKRVEEAFKVL 249
GS V+ ++ G CK + EA ++
Sbjct: 430 NQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELW 489
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
L + P+ + + G++ E +L+ + G+ Y I G E
Sbjct: 490 CRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKE 549
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTL 368
++ E EL E +V D N L+ + + D A ++ + G VP + T
Sbjct: 550 GKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTY 609
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ CK NK +E + L + + YN ++ C +G + A+ + +MK
Sbjct: 610 GVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKS 669
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
+G+ + Y+SLM C L+ AK L D+M G N+ Y +I +S++G++
Sbjct: 670 RGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNK 729
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
+ M + P+ TYT +++G C+ + A ++ N+ ++ + F
Sbjct: 730 VNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTN 789
Query: 549 SLCRR 553
LC+
Sbjct: 790 GLCKE 794
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 101/200 (50%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F+ + +KG P+L T + L +L K N+ + EVY + D+ ++ M++ C
Sbjct: 209 FSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCK 268
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
R +A G+ +M++ G+ P+V YN+++ C+ L A + ++M S +L T
Sbjct: 269 GHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLIT 328
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
Y++ I+ ++ +I+ A + M E G P+ Y +L++G C+ N+ A ++ + +
Sbjct: 329 YSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDML 388
Query: 533 NHDVMLARSILSTFMISLCR 552
+ + L++ + C+
Sbjct: 389 SKGISPNSVTLNSLIQGFCK 408
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 68/130 (52%)
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
+V+ +L+ F +++ ++S L + L+++Y V + G+ PDV +++++ A
Sbjct: 207 DVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAF 266
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+ A L+ +M G + N+ TYN +I + G ++ A R M+++ V+P
Sbjct: 267 CKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSL 326
Query: 506 TTYTSLLEGL 515
TY+ + GL
Sbjct: 327 ITYSVFINGL 336
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 65/134 (48%)
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A V + +KGL P + L+ + + + L+ + +++D + G ++ ++ +I+
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
F + + A+ LF M + GVAP+ TY +++ GLC+ L A+ K V V
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324
Query: 539 ARSILSTFMISLCR 552
+ S F+ L +
Sbjct: 325 SLITYSVFINGLIK 338
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/471 (23%), Positives = 226/471 (47%), Gaps = 16/471 (3%)
Query: 70 FFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKV-NKITLDSSVYRFIIPS 128
F A + +F + S+++S + S ++++ +L ++++ N++ ++ S FI+
Sbjct: 63 MFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERS---FIVVF 119
Query: 129 LIQGKN--TQKAFSVFNEV--KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
GK KA +F+ + +F C+ NS+L V+ ++G L+ +D + +
Sbjct: 120 RAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSF-NSVLNVIINEGLYHRGLEFYDYVVNSN 178
Query: 185 VEFST----IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
+ + + F + I C+ + + + + + +R+ + +G L+ G CK +
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERK-CLPDGYTYCTLM-DGLCKEE 236
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
R++EA +LDE++ C P + Y ++ + G + ++ G P Y
Sbjct: 237 RIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYN 296
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK 359
I GL ++ ++ +A L E +VS K +D LI G V A+ + M E+
Sbjct: 297 TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G S L L K K++E + +++ ++ ++ Y+V+V LC G+ EA
Sbjct: 357 GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEA 416
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
++ M G P+ Y+SLM+ + L A ++W +M +GCS N Y++LI
Sbjct: 417 KEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDG 476
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
VG ++ A+ ++ ML G+ PD Y+S+++GLC ++ AA +++++
Sbjct: 477 LCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHE 527
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 181/414 (43%), Gaps = 28/414 (6%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
+ +I +L + + +A VF + + C G C +L+ L + ID A+ + DEM
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYC-TLMDGLCKEERIDEAVLLLDEM 248
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
G S + + V I C+ L +V ++D + + + V +IHG C
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK--GCVPNEVTYNTLIHGLCLKG 306
Query: 241 RVEEAFKVLDELRIRECKPDFIAY----------RIVAEEFKLMGSVFEREVVLKKKRKL 290
++++A +L+ + +C P+ + Y R + +L+ S+ ER
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER---------- 356
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G + Y I GL E + EA L + + V + L+ G P A
Sbjct: 357 GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEA 416
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
N MI G +P T S+L K K +E V+V+K + + Y+V++
Sbjct: 417 KEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDG 476
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS---GC 466
LC GR++EA V +M G+ PD Y+S+++ C + A KL+ +M
Sbjct: 477 LCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKS 536
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
++ TYNIL+ +I A+ L ++ML++G PD T + L L +++N
Sbjct: 537 QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN 590
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 94/234 (40%), Gaps = 35/234 (14%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F M E+ +P T L LCK + DE V + + + YNV++
Sbjct: 206 AIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G L ++ M KG P+ YN+L+ C + L A L ++M +S C
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIP 325
Query: 469 NLKT-----------------------------------YNILISKFSEVGEIEGALRLF 493
N T Y++LIS + G+ E A+ L+
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLW 385
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
M EKG P+ Y+ L++GLC+E A E+ N+ + + S+ M
Sbjct: 386 RKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK----TYNILISKFSEVGEIEGAL 490
V +NS++ E L + +D + S + N+ ++N++I ++ ++ A+
Sbjct: 148 VKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAI 207
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
+F M E+ PD TY +L++GLC+E + A + ++ + + I + + L
Sbjct: 208 EVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGL 267
Query: 551 CRR 553
C++
Sbjct: 268 CKK 270
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 133/557 (23%), Positives = 225/557 (40%), Gaps = 92/557 (16%)
Query: 46 SLSPSLVARVI----NPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQI- 100
SLSP V +++ NP HS AL F+ ++ P ++H+P +H ILK L + +
Sbjct: 7 SLSPKRVIKLLKSEKNP-----HS-ALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVA 60
Query: 101 ----------NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE------ 144
A+D + ++ Y ++ +LI+ +A S F
Sbjct: 61 HAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGL 120
Query: 145 ----------VKFNCE----DIGPEICN---------------SLLAVLASDGYIDNALK 175
+K +C D E+ N +L+ LA +GY+ +ALK
Sbjct: 121 SPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALK 180
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+FDEM RGV + + I F + + + + + K + N V+I +G
Sbjct: 181 LFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI-NG 239
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
CK + +E+F++ ++ E D Y + G++ V K+ + GV+P
Sbjct: 240 LCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPD 299
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNF 355
Y + G + RI E EL +V+
Sbjct: 300 VVVYNTMLNGYLRAGRIEECLELWKVM--------------------------------- 326
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
EK T+ + + L + L + K DE + ++++L D D +Y V+V LC +G
Sbjct: 327 --EKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGY 384
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L +A +++E + D D Y+S++ CRE L + DQM GC N N
Sbjct: 385 LNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNA 444
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
+I+ F ++E ALR F NM+ KG P TY +L+ GL + A+ + + +
Sbjct: 445 VINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKG 504
Query: 536 VMLARSILSTFMISLCR 552
S M LC+
Sbjct: 505 WKPNMITYSLLMNGLCQ 521
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 213/480 (44%), Gaps = 28/480 (5%)
Query: 54 RVINPYLLTHHSLALGFFN----------WAS--QQPNFTHSPLSYHSILKSLSLSRQIN 101
R + P + ++ L GFF W + P+ + SY+ ++ L + +
Sbjct: 188 RGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFD 247
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NS 159
+ ++K N+ D Y +I L N A V+ E+ N + P++ N+
Sbjct: 248 ESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAEN--GVSPDVVVYNT 305
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
+L G I+ L+++ M G + + + + I ENAK+ + +S+ + + +++
Sbjct: 306 MLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKD 364
Query: 220 ---NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+SM G +++HG CK + +A +L+E D AY + G
Sbjct: 365 CCADSMTYG-----VLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGR 419
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLN 335
+ E VL + K G P I G + ++ +A + G ++ G F N
Sbjct: 420 LDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVV-TYN 478
Query: 336 ALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
LI +S + S A M++KG P + T S L LC+ K D + ++
Sbjct: 479 TLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK 538
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ D++ +N+++ LC+SG++ +A + EMK++ P++ +N+LME + A
Sbjct: 539 GFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERA 598
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K+WD + G ++ +YNI + I A+ ++ +++GV P A T+ L++G
Sbjct: 599 SKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQG 658
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/463 (23%), Positives = 205/463 (44%), Gaps = 7/463 (1%)
Query: 84 PLSYH--SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSV 141
P ++H IL SL ++ + S+ K+ + N T D ++ + AFSV
Sbjct: 61 PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120
Query: 142 FNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ N+L+ L G I AL D++ +G + + + + I C+
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ V +L RK E + V+ IIH CK K + +A + E+ ++ P+
Sbjct: 181 TGETKAVARLL---RKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPN 237
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ Y + F +MG + E +L + + + P + I L E ++ AK +
Sbjct: 238 VVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLA 297
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
V++ D N+LI ++ ++A F M + G P + T + + LCK
Sbjct: 298 VMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEK 357
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
DE + +++ + + D+ +Y ++ LC + L A + ++MK +G+ PDV Y
Sbjct: 358 MVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYT 417
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
L++A C+ L AK+ + ++ G N++TYN++I+ + A+ L M K
Sbjct: 418 ILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGK 477
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
G PDA T+ +++ L ++ A ++ + + + AR +
Sbjct: 478 GCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKV 520
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/463 (21%), Positives = 211/463 (45%), Gaps = 33/463 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+S++ ++ V + + +T + Y +I L + K +A S+F E
Sbjct: 309 VTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEE 368
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+K+ +++ P+I SL+ L + +++ A+ + +M +G++ + + + C+
Sbjct: 369 MKY--KNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKG 426
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV----LIIHGFCKGKRVEEAFKVLDELRIRECK 258
+L + ++ G + V ++I+G CK EA + ++ + C
Sbjct: 427 GRLENAKEFFQRL------LVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCM 480
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD I ++ + + ++FE++ K ++ L RE I + E R KE
Sbjct: 481 PDAITFKTI------ICALFEKDENDKAEKIL---------REMIARGLQEARKVRLKEA 525
Query: 319 GEVI-VSGKFTIDDDVLNA---LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
V+ V K I DV+ + G + + A F M + G P + + +
Sbjct: 526 KIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDG 585
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK+ DE + +++ + + F ++ +Y ++ LC + L A +++EMK G+ PD
Sbjct: 586 LCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPD 645
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V Y L++ C+ L AK+++ ++ G N++ Y +I++ + G + AL L
Sbjct: 646 VYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQX 705
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
M +KG PDA T+ ++ L ++ A ++ + + +M
Sbjct: 706 KMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLM 748
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/503 (22%), Positives = 220/503 (43%), Gaps = 52/503 (10%)
Query: 87 YHSILKSLSLSRQI-NAID----SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSV 141
Y++I+ SL ++ + +A D ++K + N +T ++ VY F I + ++AFS+
Sbjct: 206 YNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMG-----HLKEAFSL 260
Query: 142 FNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF-----GV 194
NE+K ++I P++C N+L+ L +G + A + M ++ + + G
Sbjct: 261 LNEMKL--KNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGY 318
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
F +NAK SM ++ + +I G CK K V+EA + +E++
Sbjct: 319 FFLNKVKNAKY-VFYSM------AQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKY 371
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVL-KKKRKLGVAPRTNDYREFILGLIVERRIC 313
+ PD + Y + + ER + L KK ++ G+ P Y + L R+
Sbjct: 372 KNMIPDIVTYTSLIDGL-CKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 430
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLS 372
AKE + ++ + ++ N +I + D A+ + M KG +P T +
Sbjct: 431 NAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTII 490
Query: 373 KNLCKRNKSDELVEVYK-----------------------VLSANDYFTDMESYNVMVSF 409
L +++++D+ ++ + V++ D+ +Y ++
Sbjct: 491 CALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDG 550
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
L+ A V M + G+ P+V Y +++ C++ + A L+++M N
Sbjct: 551 YFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPN 610
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ TY LI + +E A+ L M E G+ PD +YT LL+GLC+ L+ A E+F
Sbjct: 611 IVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQ 670
Query: 530 KSVNHDVMLARSILSTFMISLCR 552
+ + L + + + LC+
Sbjct: 671 RLLVKGYHLNVQVYTAMINELCK 693
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 136/295 (46%), Gaps = 1/295 (0%)
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD I+ F + + VL K G P I GL I +A
Sbjct: 96 PDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYF 155
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRV-PTLSTLSNLSKNLCK 377
+ +V+ F ++ LI + A+ +E V P + + + +LCK
Sbjct: 156 HDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCK 215
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ ++Y + ++ +YN +V C G L+EA+ ++ EMK K ++PDV
Sbjct: 216 NKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCT 275
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
+N+L++A +E ++ AK + M + ++ TYN LI + + +++ A +F++M
Sbjct: 276 FNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMA 335
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ GV P+ TYT++++GLC+E + A +F + +++ ++ + LC+
Sbjct: 336 QSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCK 390
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 172/438 (39%), Gaps = 50/438 (11%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDE 179
+ +I+ SL+ K+ S+F KF P++C N L+ +I A +
Sbjct: 66 FNYILSSLVNNKHYPTVISLFK--KFESNGATPDLCTLNILMNCFCHLTHITFAFSVLAN 123
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
+ RG + I I C ++ + L D+V + + V +I+G CK
Sbjct: 124 ILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL--NQVSYRTLINGLCKT 181
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEF---KLMGSVFE--REVVLKKKRKLGVAP 294
+ ++L +L KPD + Y + KL+G + E+++K G++P
Sbjct: 182 GETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVK-----GISP 236
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFN 354
Y + G + + EA L N
Sbjct: 237 NVVTYNALVYGFCIMGHLKEAFSL----------------------------------LN 262
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M K P + T + L L K K V V+ D+ +YN ++
Sbjct: 263 EMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLN 322
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+++ A V M + G+ P+V Y ++++ C+E ++ A L+++M ++ TY
Sbjct: 323 KVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYT 382
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
LI + +E A+ L M E+G+ PD +YT LL+ LC+ L+ A E F + +
Sbjct: 383 SLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVK 442
Query: 535 DVMLARSILSTFMISLCR 552
L + + LC+
Sbjct: 443 GYHLNVQTYNVMINGLCK 460
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 101/236 (42%), Gaps = 35/236 (14%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
++++G P TL+ L K LC R + + + + + A + + SY +++ LC +G
Sbjct: 124 ILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGE 183
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ ++++++ + PDV YN+++ + C+ LL A L+ +M G S N+ TYN
Sbjct: 184 TKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNA 243
Query: 476 LISKFSEVGEIEGALRLFHNM-----------------------------------LEKG 500
L+ F +G ++ A L + M ++
Sbjct: 244 LVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKAC 303
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+ PD TY SL++G ++ A VF V +T + LC+ ++
Sbjct: 304 IKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMV 359
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 65/154 (42%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+N ++S L + + ++ + G PD+ N LM C + A + +
Sbjct: 66 FNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANIL 125
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G N T N LI GEI+ AL ++ +G + +Y +L+ GLC+ +
Sbjct: 126 KRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETK 185
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
A + K H V + +T + SLC+ L+
Sbjct: 186 AVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLL 219
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 218/504 (43%), Gaps = 24/504 (4%)
Query: 65 SLALGFFNWASQQPNFT--------HSPLSYHSILKSLSLSRQI--NAIDSV---LKQVK 111
SL L F +WA Q F+ H Y + SL+ ++ N +D L Q
Sbjct: 62 SLVLKFLDWARSQQFFSFQCKCLALHILTRYKLYKTAQSLAEEVVVNTVDETGEDLFQCL 121
Query: 112 VN---KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLL-AVLASD 167
N + S+V+ ++ S + KA S+ N K G N++L AV+ +
Sbjct: 122 KNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTK 181
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
+ A +F EM GV + + + I FC L L E+ + N + V
Sbjct: 182 QSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMER--NGCLPNVV 239
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
II +CK +++ EAFK+L + ++ P+ I+Y +V G + E +L++
Sbjct: 240 TYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM 299
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DP 346
K P + I G +A L +V + + LI S+ +
Sbjct: 300 SKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNL 359
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A+ F + M ++G P T + L ++ + ++ K + N + + +YN +
Sbjct: 360 NRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNAL 419
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
++ C GR+ +A G++QEM +G PDV Y++++ CR L A +L +M A G
Sbjct: 420 INGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF- 525
S ++ TY+ LI + + LF ML G+ PD TYTSL+ C E +L A
Sbjct: 480 SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR 539
Query: 526 ---EVFNKSVNHDVMLARSILSTF 546
E+ K + D++ +++ F
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGF 563
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 205/463 (44%), Gaps = 10/463 (2%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQ-INAIDSVLKQVKVNKITLDSSVYRFI 125
AL N A + F LSY++IL ++ ++Q + + + K++ + ++ + Y +
Sbjct: 151 ALSIVNLA-KSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNIL 209
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
I N + F E++ N N+++ I A K+ M+ +G+
Sbjct: 210 IRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGL 269
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
+ I + V I C ++ + +L+E+ KR + V +I+G+C +A
Sbjct: 270 NPNLISYNVVINGLCREGQMKETSEILEEMSKRR--YVPDRVTFNTLINGYCNVGNFHQA 327
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
+ E+ P+ + Y + G++ L + R G+ P Y I G
Sbjct: 328 LVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDG 387
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRV 362
+ + +A ++ + +V FT NALI + ++ S ++ MIE+G +
Sbjct: 388 FSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLL--QEMIERGFI 445
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + + S + C+ + ++ ++ + A D+ +Y+ ++ LC RL E +
Sbjct: 446 PDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDL 505
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
QEM GL PD Y SL+ A C E L A +L D+M G S ++ TYN+LI+ F++
Sbjct: 506 FQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNK 565
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+ A RL +L + P+ TY +L++ C ++A
Sbjct: 566 QSRTKEAKRLLLKLLYEESVPNEITYNTLIDN-CNNLEFKSAL 607
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 170/402 (42%), Gaps = 28/402 (6%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY+ ++ L Q+ +L+++ + D + +I N +A + E
Sbjct: 274 ISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAE 333
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ N + P + +L+ + G ++ A++ D+M RG+ + + I F +
Sbjct: 334 MVKN--GLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQ 391
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L Q ++ E+ EN + +I+G C R+E+A +L E+ R PD +
Sbjct: 392 GFLKQAYQIMKEMV--ENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVV 449
Query: 263 AYRIVAEEF---KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
+Y + F + + F+ +V + K G++P Y I GL +RR+ E +L
Sbjct: 450 SYSTIISGFCRNQELEKAFQLKVEMVAK---GISPDVATYSSLIQGLCKQRRLGEVCDLF 506
Query: 320 EVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ ++S D+ +LI + D A+ + MI+KG P + T + L K+
Sbjct: 507 QEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQ 566
Query: 379 NKSDE--------LVE-------VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+++ E L E Y L N + +S ++ C G + EA V+
Sbjct: 567 SRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVL 626
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+ M +KG + YN ++ + + A L+ +M SG
Sbjct: 627 ESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSG 668
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Query: 402 SYNVMV-SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
SYN ++ + + T ++ A G+ +EM G+ P+V YN L+ C L + +
Sbjct: 169 SYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGE 228
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M +GC N+ TYN +I + ++ +I A +L M KG+ P+ +Y ++ GLC+E
Sbjct: 229 MERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQ 288
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
++ E+ + + R +T + C
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYC 319
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 198/446 (44%), Gaps = 49/446 (10%)
Query: 117 LDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC------EDIG--PEIC--NSLLAVLAS 166
L+S VYR IP +I + + F + K E G P++ N L++
Sbjct: 137 LESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCK 196
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
G IDNAL++ D M+ V + + + C++ KL Q + +LD R+ +
Sbjct: 197 SGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLD--RQLQKECYPDV 251
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
+ ++I CK V +A K+LDE+R + KPD + Y ++ G + E L
Sbjct: 252 ITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNN 311
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP 346
G P I I+ R +C +G++ + +L+
Sbjct: 312 MPSYGCQP------NVITHNIILRSMCS---------TGRWMDAEKLLSD---------- 346
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
M+ KG P++ T + L LC++ +++ + + + + SYN +
Sbjct: 347 ---------MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPL 397
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ C ++ A + M +G PD+ YN+L+ A C++ + A ++ +Q+ + GC
Sbjct: 398 LHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 457
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
S L TYN +I S+VG+ E A++L M KG+ PD TY+SL+ GL +E + A +
Sbjct: 458 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 517
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
F+ + ++ M+ LC+
Sbjct: 518 FFHDLEGLGIRPNAITYNSIMLGLCK 543
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 185/416 (44%), Gaps = 10/416 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALK 175
D Y +I + A V + + ++ P++ N++L L G + A++
Sbjct: 183 DVITYNVLISGYCKSGEIDNALQVLDRM-----NVAPDVVTYNTILRTLCDSGKLKQAME 237
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ D + I + + I C+ + +GQ + +LDE+R + + V ++I+G
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSK--PDVVTYNVLING 295
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
CK R++EA K L+ + C+P+ I + I+ G + E +L + G +P
Sbjct: 296 ICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPS 355
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFN 354
+ I L + + A ++ E + T + N L+ G AI + +
Sbjct: 356 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 415
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+ +G P + T + L LCK K D VE+ LS+ + +YN ++ L G
Sbjct: 416 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVG 475
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ A ++ EM+RKGL PD+ Y+SL+ RE + A K + + G N TYN
Sbjct: 476 KTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYN 535
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
++ + + + A+ M+ K P TYT L+EG+ E + A ++ N+
Sbjct: 536 SIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNE 591
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 13/203 (6%)
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F M+ +G +P + ++L + C+ K+ + V ++L + D+ +YNV++S C
Sbjct: 136 FLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYC 195
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
SG + A +Q + R + PDV YN+++ C L+ A ++ D+ C ++
Sbjct: 196 KSGEIDNA---LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVI 252
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
TY ILI + + A++L M KG PD TY L+ G+C+E L A + N
Sbjct: 253 TYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 312
Query: 532 ---------VNHDVMLARSILST 545
+ H+++L RS+ ST
Sbjct: 313 PSYGCQPNVITHNIIL-RSMCST 334
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 144/321 (44%), Gaps = 22/321 (6%)
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+E+ FK L+ + R PD I + F +G + V++ + G P Y
Sbjct: 130 LEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNV 189
Query: 302 FILGLIVERRICEAKELGEVI-VSGKFTIDDDVL--NALIGSV-SSIDPRSAIVFFNFMI 357
I G C++ E+ + V + + DV+ N ++ ++ S + A+ + +
Sbjct: 190 LISGY------CKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQL 243
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+K P + T + L + CK + + +++ + D+ +YNV+++ +C GRL
Sbjct: 244 QKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLD 303
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
EA + M G P+V +N ++ + C A+KL M GCS ++ T+NILI
Sbjct: 304 EAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI 363
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ G + A+ + M G P++ +Y LL G C+E + A E D+M
Sbjct: 364 NFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL------DIM 417
Query: 538 LARS------ILSTFMISLCR 552
++R +T + +LC+
Sbjct: 418 VSRGCYPDIVTYNTLLTALCK 438
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
L +G L + + ++ M +G PD+ SL+ CR + A + + + SG +
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ TYN+LIS + + GEI+ AL++ M VAPD TY ++L LC L+ A EV +
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240
Query: 530 KSVNHD 535
+ + +
Sbjct: 241 RQLQKE 246
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 95/240 (39%), Gaps = 14/240 (5%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQI 100
LR SPS+V I L L + + P +P LSY+ +L +++
Sbjct: 348 LRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKM 407
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--N 158
+ L + D Y ++ +L + A + N+ + + P + N
Sbjct: 408 DRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ--LSSKGCSPVLITYN 465
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK- 217
+++ L+ G + A+K+ DEM +G++ I + + K+ + + ++
Sbjct: 466 TVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGL 525
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
R N++ S I+ G CK ++ + A L + + CKP Y I+ E G
Sbjct: 526 GIRPNAITYNS-----IMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEG 580
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 205/454 (45%), Gaps = 14/454 (3%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S +S++SIL L R+++ S+ + +K + +SS Y II L G ++A+ +
Sbjct: 353 SVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRIL 411
Query: 143 NEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+E++ + P + N ++ L ++ A K+F+ S RG + + I
Sbjct: 412 DEMEH--ASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLG 469
Query: 201 ENAKLGQVLSMLD---EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
+ ++ + + + + N ++ S+I IHG R E+ K+ EL R C
Sbjct: 470 KKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG-----RKEDGHKIFKELIRRGC 524
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
KPD + G V + ++ + R G P Y I GL + E
Sbjct: 525 KPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSN 584
Query: 318 LGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+ + F +D NA++ G S A M EK PT++T + L
Sbjct: 585 IFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLA 644
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K ++ DE +++ + ++ Y+ ++ GR+ EAY +++EM +KGL P+V
Sbjct: 645 KIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY 704
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
+NSL++A + + + A + M C N TY+ILI+ V + A + +M
Sbjct: 705 TWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDM 764
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
++G+ P+ TYT+++ GL + N+ A+ +F +
Sbjct: 765 QKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 798
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/491 (21%), Positives = 216/491 (43%), Gaps = 11/491 (2%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
+A FF+ Q +SY S++ L + ++ + + Q++ + + Y +
Sbjct: 267 MAWKFFHELKAQ-GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM 325
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHR 183
I + A+ + ++ P + NS+L L +D AL +F+ M +
Sbjct: 326 IMGYGSAGRFEDAYKLLERLRER--GCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-K 382
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRV 242
E ++ + + I C ++ + +LDE+ E++ + +++ V +++ CK +++
Sbjct: 383 DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEM---EHASLFPNLLTVNIMVDRLCKARKL 439
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
EEA+K+ + R C PD + Y + + G V E + +K G Y
Sbjct: 440 EEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSL 499
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGR 361
I + R + ++ + ++ D +LN + V + + + F + G
Sbjct: 500 IRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF 559
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
+P + + S L L K ++ E ++ + + D +YN +V C SG++ +AY
Sbjct: 560 LPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYE 619
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+++EMK K + P V+ Y ++++ + D L A L+++ + G N+ Y+ LI F
Sbjct: 620 ILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFG 679
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
+VG I+ A + M++KG+ P+ T+ SLL+ L + + A F
Sbjct: 680 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTY 739
Query: 542 ILSTFMISLCR 552
S + LCR
Sbjct: 740 TYSILINGLCR 750
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/513 (20%), Positives = 230/513 (44%), Gaps = 33/513 (6%)
Query: 34 LEQTLHQL-----GLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
LE+ L ++ GL + L A ++ L LA+ +P F+ +Y
Sbjct: 128 LEKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFS----AYT 183
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
++ +L+ +R+ +L+Q++ + ++ ++ +L + A ++ +EVK +
Sbjct: 184 VLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGS 243
Query: 149 CEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV 208
C + + N + G +D A K F E+ +G++ + + IW C+ +LG+
Sbjct: 244 CLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEA 303
Query: 209 LSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY---- 264
+ ++ + E S+ +I+ G+ R E+A+K+L+ LR R C P +++
Sbjct: 304 EELFAQM-EAERSVPCAYAYNTMIM-GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSIL 361
Query: 265 ------RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
R V E S+FE V+KK + P ++ Y I L + R+ EA +
Sbjct: 362 TCLGKKRKVDEAL----SLFE---VMKKDAE----PNSSTYNIIIDMLCLGGRVEEAYRI 410
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ + + +N ++ + A F ++G P T +L L K
Sbjct: 411 LDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGK 470
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ + DE +++ + + + Y ++ GR + + + +E+ R+G PD++
Sbjct: 471 KGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTL 530
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
N+ M+ + + + +++ + + G ++++Y+ILI ++ G+ +FH M
Sbjct: 531 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 590
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
++G A DA Y ++++G C+ + A+E+ +
Sbjct: 591 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 623
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 121/531 (22%), Positives = 224/531 (42%), Gaps = 59/531 (11%)
Query: 27 ARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYL--LTHHSLALGFFNWASQQPNFTHSP 84
A WTP L + + + S S A V+ L + + SLA FF AS P
Sbjct: 54 APTWTPDLARAVSS-----TFSASPTADVVISVLRSIRNPSLAAPFFLLASSSSASAPHP 108
Query: 85 L---SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF-- 139
L +YH++L L + A++ VL+++ V L + + +L++ + A
Sbjct: 109 LPADAYHAVLPFLH--HDLAALEKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLA 166
Query: 140 -SVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+V +KF P L+ LA + AL++ +M G E F +
Sbjct: 167 VAVMRRLKFR-----PAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLV 221
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
++ L+++DEV+ + + V+ + I F K V+ A+K EL+ +
Sbjct: 222 RALAREGQVADALALVDEVKG--SCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQG 279
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
KPD ++Y + G + E E + + P Y I+G R +A
Sbjct: 280 LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAY 339
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+L E + E+G +P++ + +++ L
Sbjct: 340 KLLERLR----------------------------------ERGCIPSVVSFNSILTCLG 365
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K+ K DE + +++V+ D + +YN+++ LC GR+ EAY ++ EM+ L P++
Sbjct: 366 KKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLL 424
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
N +++ C+ L A K+++ GC+ + TY LI + G+++ A RLF M
Sbjct: 425 TVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM 484
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
L+ G + YTSL+ + ++F + + ++L+T+M
Sbjct: 485 LDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYM 535
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 93/461 (20%), Positives = 188/461 (40%), Gaps = 46/461 (9%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
AS PN L+ + ++ L +R++ + + D Y +I L +
Sbjct: 417 ASLFPNL----LTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKG 472
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
+A+ +F ++ + P + SL+ G ++ K+F E+ RG +
Sbjct: 473 QVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLN 532
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
++ + ++ + + +++R + ++IHG K + E + ++
Sbjct: 533 TYMDCVFKAGEVEKGRMIFEDIRSY--GFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 590
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+ D AY V + F G V + +L++ ++ V P Y + GL R+
Sbjct: 591 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 650
Query: 314 EAKELGEVIVSGKFTIDDDVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
EA L E S ++ + ++LI G V ID A + M++KG P + T ++
Sbjct: 651 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRID--EAYLILEEMMKKGLTPNVYTWNS 708
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L L K + +E + ++ + + +Y+++++ LC + +A+ Q+M+++G
Sbjct: 709 LLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG 768
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L P+V TY +IS ++VG I A
Sbjct: 769 LVPNVV-----------------------------------TYTTMISGLAKVGNITDAY 793
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
LF G PDA ++ +L+EG+ A++VF ++
Sbjct: 794 SLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEET 834
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 177/388 (45%), Gaps = 34/388 (8%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+LL G +D ALK+FD RG + + I FC+ KL + +L R
Sbjct: 49 NTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQ--RM 106
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY-----------RI 266
+++ V +++G CK RV+EA ++ + + P+ I Y R
Sbjct: 107 VSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRG 163
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
V+E KL GSV K G P Y I GL+ E R+ EA EL +V K
Sbjct: 164 VSEALKLFGSVL----------KQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLV--K 211
Query: 327 FTIDDDVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
++ D + + G + A++ M EKG VP + + + + LCK + DE
Sbjct: 212 HGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDE 271
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ + A + S+N ++ C +G+ ++A +EM ++G+ P V YN L++
Sbjct: 272 AEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVD 331
Query: 444 ACCR---EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
C+ E ++ A L+D M G ++ TY+ LI + G+++ A RL M KG
Sbjct: 332 GLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKG 391
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVF 528
P+ TY SL+ GLC + A E+F
Sbjct: 392 CIPNVYTYNSLISGLCGLEKVDEALELF 419
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 171/378 (45%), Gaps = 41/378 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+LL+ L + G + +A +++ M G + + + FC+ +L + L + D K
Sbjct: 14 NALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVK 73
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R + V +I+GFCK +++EA ++L + PD + Y + G V
Sbjct: 74 R--GFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRV 131
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E +++ K G +P Y I GL E R
Sbjct: 132 DEARMLIVDK---GFSPNVITYSTLISGLCRELR-------------------------- 162
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
VS A+ F ++++G P + T + L L K ++ +E E++ L +
Sbjct: 163 --GVSE-----ALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLE 215
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D +Y V + LC +GR+ +A ++++M KG PDV +N+++ C+E + A+ L
Sbjct: 216 PDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVL 275
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC- 516
M A GCS N ++N LI G+ + A+ F ML++GV P TY L++GLC
Sbjct: 276 LSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCK 335
Query: 517 --QETNLQAAFEVFNKSV 532
QE ++ A +F+ +
Sbjct: 336 ARQEGRIKEAITLFDAMI 353
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 194/455 (42%), Gaps = 57/455 (12%)
Query: 58 PYLLTHHSLALGFFNWASQ-----------QPNFTHSPLSYHSILKSLSLSRQINAIDSV 106
P +T+++L G N + ++ ++Y+++L ++ +D
Sbjct: 8 PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFC---KVGELDEA 64
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV--------KFNCEDIGPEIC- 157
LK D +V R +P ++ F +++ + E++ P++
Sbjct: 65 LK-------IFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVT 117
Query: 158 -NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK-LGQVLSMLDEV 215
NSL+ L +G +D A + + +G + I + I C + + + L + V
Sbjct: 118 YNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSV 174
Query: 216 RKR----ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
K+ E N ++I G K RV EAF++ L +PD I Y + +
Sbjct: 175 LKQGYEPEVPTYN------ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGL 228
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG----KF 327
G V + ++LK + G P + I GL E+R+ EA EV++SG
Sbjct: 229 CKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEA----EVLLSGMEAKGC 284
Query: 328 TIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK---RNKSDE 383
+ + N LI G + + A+ F M+++G PT+ T + L LCK + E
Sbjct: 285 SPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKE 344
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ ++ + D+ +Y+ ++ L +G+L +A ++ M+ KG P+V YNSL+
Sbjct: 345 AITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLIS 404
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
C + + A +L+ M GC + TY +IS
Sbjct: 405 GLCGLEKVDEALELFVAMVEKGCVPDTITYGTIIS 439
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 174/410 (42%), Gaps = 58/410 (14%)
Query: 52 VARVINPYLLTHHSLALGF-----FNWASQ------QPNFTHSPLSYHSILKSLSLSRQI 100
V R P ++T+++L GF + A + N ++Y+S++ L + ++
Sbjct: 72 VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRV 131
Query: 101 NAIDSVL--KQVKVNKITLDSSVYRFIIPSLIQG-KNTQKAFSVFNEV-KFNCEDIGPEI 156
+ ++ K N IT Y +I L + + +A +F V K E PE+
Sbjct: 132 DEARMLIVDKGFSPNVIT-----YSTLISGLCRELRGVSEALKLFGSVLKQGYE---PEV 183
Query: 157 --CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
N L+ L + ++ A ++F + G+E I + VFI C+ ++ L ML +
Sbjct: 184 PTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKD 243
Query: 215 VRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+ E + V +I+G CK KRV+EA +L + + C P+ I++ +
Sbjct: 244 MD--EKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRA 301
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G + K+ K GV P Y + GL C+A++ G +
Sbjct: 302 GKWKKAMTTFKEMLKRGVKPTVVTYNILVDGL------CKARQEGRI------------- 342
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+ AI F+ MIEKGRVP + T S L L K K D+ + + A
Sbjct: 343 ------------KEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAK 390
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
++ +YN ++S LC ++ EA + M KG PD Y +++ A
Sbjct: 391 GCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 83/154 (53%), Gaps = 5/154 (3%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN ++S LC GR+ +A + + M + G PDV YN+L+ C+ L A K++D
Sbjct: 12 TYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGA 71
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G ++ TYN LI+ F + +++ A R+ M+ + + PD TY SL+ GLC+ +
Sbjct: 72 VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRV 131
Query: 522 -QAAFEVFNKSVNHDVMLARSILSTFMISLCRRV 554
+A + +K + +V+ ST + LCR +
Sbjct: 132 DEARMLIVDKGFSPNVI----TYSTLISGLCREL 161
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 33/230 (14%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M + G P T + L LC + + +Y+ + Y D+ +YN ++ C G
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS----------- 464
L EA + ++G PDV YN+L+ C+ D L A+++ +M +
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 465 ---------------------GCSGNLKTYNILISKFS-EVGEIEGALRLFHNMLEKGVA 502
G S N+ TY+ LIS E+ + AL+LF ++L++G
Sbjct: 121 LVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYE 180
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
P+ TY L++GL +E + AFE+F+ V H + + F+ LC+
Sbjct: 181 PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCK 230
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 210/468 (44%), Gaps = 29/468 (6%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A F+ +Q N T + ++ IL SL S+ + + S+ +Q++ I + ++ F
Sbjct: 60 AFSLFSRLLRQ-NPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGI--NPVLFHFQH 116
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVE 186
P + G + N + F +L+ L G I AL D + G +
Sbjct: 117 PHQLMGYHP-------NTITFT----------TLIKGLCLKGQIHQALLFHDNVVAMGFQ 159
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEA 245
+G+G I C K+G+ + LD +R+ + +++ +V+ II G CK K V +A
Sbjct: 160 LDQVGYGTLIHGLC---KVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDA 216
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
F + E+ + P+ + Y + F +G + + + K + P + + G
Sbjct: 217 FDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDG 276
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRV 362
+ ++ E K + +++ + +L+ V ++ +I++ M ++G
Sbjct: 277 FCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYT--MSQRGVN 334
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + + + L CK K DE + ++K + D+ +YN ++ LC G++ A +
Sbjct: 335 PDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKL 394
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ EM +G+ PD+ Y+S+++A C+ + A L ++ G N+ TY ILI +
Sbjct: 395 VDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCK 454
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
G +E A +F ++L KG TYT ++ G C + A + +K
Sbjct: 455 GGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSK 502
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 106/484 (21%), Positives = 208/484 (42%), Gaps = 16/484 (3%)
Query: 22 NRTRPARKWTPLLEQTLHQLGLRD--SLSPSLVARVINPYLLTHHSLALGFFNWASQQPN 79
N T PA ++ +L + SLS + INP L F Q
Sbjct: 71 NPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLF--------HFQHPHQLMG 122
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
+ + +++ +++K L L QI+ V LD Y +I L + T+ A
Sbjct: 123 YHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAAL 182
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+ V N + ++++ + D ++++A ++ EM +G+ + + + I F
Sbjct: 183 DLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGF 242
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECK 258
+GQ+ +D K I V +++ GFCK +++E V + + K
Sbjct: 243 ---FTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIK 299
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
P+ + Y + + + L+ V + + +L + GV P Y I G +++ EA L
Sbjct: 300 PNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNL 359
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ + D N+LI + + S A+ + M ++G P + T S++ LCK
Sbjct: 360 FKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCK 419
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
++ D+ + + L +M +Y +++ LC GRL +A+ + +++ KG + V+
Sbjct: 420 NHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNT 479
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
Y ++ C + L A L +M + C + TY I+I + E + A +L M+
Sbjct: 480 YTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL-REMI 538
Query: 498 EKGV 501
+G+
Sbjct: 539 TRGL 542
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/490 (22%), Positives = 197/490 (40%), Gaps = 62/490 (12%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI-----QGKNTQKAFS 140
SY+ + S + ++ ++ LK N I SS FI S I + AFS
Sbjct: 4 SYYVVPVSYFVPKKFHSF-QFLKNTHFNFIPYSSSKINFIPYSSISTTFHNNNDVVDAFS 62
Query: 141 VFNEVKFNCEDIGPEI-CNSLLAVLASDGYIDNALKMFDEMSHRGV-------------- 185
+F+ + P I N +L L + L + +M G+
Sbjct: 63 LFSRL-LRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLM 121
Query: 186 --EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
+TI F I C ++ Q L D V + V +IHG CK V
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQL--DQVGYGTLIHGLCK---VG 176
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
E LD LR ++ G++ + VV+ Y I
Sbjct: 177 ETRAALDLLR------------------RVDGNLVQPNVVM--------------YSTII 204
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRV 362
G+ ++ + +A +L +VS + + +ALI ++ + AI FN MI +
Sbjct: 205 DGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIK 264
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + T + L CK K E V+ ++ ++ +Y ++ C + +A +
Sbjct: 265 PDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSI 324
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ M ++G++PD+ YN L++ C+ + A L+ +M ++ TYN LI +
Sbjct: 325 LYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCK 384
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
+G+I AL+L M ++GV PD TY+S+L+ LC+ + A + K + +
Sbjct: 385 LGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYT 444
Query: 543 LSTFMISLCR 552
+ + LC+
Sbjct: 445 YTILIDGLCK 454
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 203/488 (41%), Gaps = 77/488 (15%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
+ FF WA Q ++ H LSY+ +L+ L+ S + + + + ++ Y +++
Sbjct: 1 MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLR 60
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
SL Q + ++A SV F M+ +G
Sbjct: 61 SLCQAQRFEEARSV-----------------------------------FRGMAAQGCSP 85
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEV---RKRENSMINGSVIAVLIIHGFCKGKRVEE 244
+ + + I C K+ + +L+E+ + N + GS+++ G CK +++E
Sbjct: 86 NVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLS-----GLCKMGKLKE 140
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A + + R C PD + Y ++ + F G + E + ++ + G P Y +
Sbjct: 141 AVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLS 200
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT 364
G R+ G+F G V S+ F M+ +G VP
Sbjct: 201 GF--SRK-------------GEF-----------GRVQSL--------FKDMLRQGCVPN 226
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
+ T +NL CK E ++ + + D+ SYN ++ +C+ G+ EA +++
Sbjct: 227 IFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLR 286
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
EM R G+ PD+ YN L++ + L A KL+ ++ SG + +Y+ +I G
Sbjct: 287 EMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAG 346
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILS 544
++ A +F +M+ G APDA L+ GLC+ L + E+F V + + +
Sbjct: 347 KVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYN 406
Query: 545 TFMISLCR 552
M LC+
Sbjct: 407 LLMYKLCK 414
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 198/446 (44%), Gaps = 49/446 (10%)
Query: 117 LDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC------EDIG--PEIC--NSLLAVLAS 166
L+S VYR IP +I + + F + K E G P++ N L++
Sbjct: 80 LESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCK 139
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
G IDNAL++ D M+ V + + + C++ KL Q + +LD R+ +
Sbjct: 140 SGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLD--RQLQKECYPDV 194
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
+ ++I CK V +A K+LDE+R + KPD + Y ++ G + E L
Sbjct: 195 ITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNN 254
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP 346
G P I I+ R +C +G++ + +L+
Sbjct: 255 MPSYGCQP------NVITHNIILRSMCS---------TGRWMDAEKLLSD---------- 289
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
M+ KG P++ T + L LC++ +++ + + + + SYN +
Sbjct: 290 ---------MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPL 340
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ C ++ A + M +G PD+ YN+L+ A C++ + A ++ +Q+ + GC
Sbjct: 341 LHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 400
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
S L TYN +I S+VG+ E A++L M KG+ PD TY+SL+ GL +E + A +
Sbjct: 401 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 460
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
F+ + ++ M+ LC+
Sbjct: 461 FFHDLEGLGIRPNAITYNSIMLGLCK 486
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 185/416 (44%), Gaps = 10/416 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALK 175
D Y +I + A V + + ++ P++ N++L L G + A++
Sbjct: 126 DVITYNVLISGYCKSGEIDNALQVLDRM-----NVAPDVVTYNTILRTLCDSGKLKQAME 180
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ D + I + + I C+ + +GQ + +LDE+R + + V ++I+G
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSK--PDVVTYNVLING 238
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
CK R++EA K L+ + C+P+ I + I+ G + E +L + G +P
Sbjct: 239 ICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPS 298
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFN 354
+ I L + + A ++ E + T + N L+ G AI + +
Sbjct: 299 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 358
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+ +G P + T + L LCK K D VE+ LS+ + +YN ++ L G
Sbjct: 359 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVG 418
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ A ++ EM+RKGL PD+ Y+SL+ RE + A K + + G N TYN
Sbjct: 419 KTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYN 478
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
++ + + + A+ M+ K P TYT L+EG+ E + A ++ N+
Sbjct: 479 SIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNE 534
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 13/203 (6%)
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F M+ +G +P + ++L + C+ K+ + V ++L + D+ +YNV++S C
Sbjct: 79 FLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYC 138
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
SG + A +Q + R + PDV YN+++ C L+ A ++ D+ C ++
Sbjct: 139 KSGEIDNA---LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVI 195
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
TY ILI + + A++L M KG PD TY L+ G+C+E L A + N
Sbjct: 196 TYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 255
Query: 532 ---------VNHDVMLARSILST 545
+ H+++L RS+ ST
Sbjct: 256 PSYGCQPNVITHNIIL-RSMCST 277
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 141/315 (44%), Gaps = 10/315 (3%)
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+E+ FK L+ + R PD I + F +G + V++ + G P Y
Sbjct: 73 LEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNV 132
Query: 302 FILGLIVERRICEAKELGEVI-VSGKFTIDDDVL--NALIGSV-SSIDPRSAIVFFNFMI 357
I G C++ E+ + V + + DV+ N ++ ++ S + A+ + +
Sbjct: 133 LISGY------CKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQL 186
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+K P + T + L + CK + + +++ + D+ +YNV+++ +C GRL
Sbjct: 187 QKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLD 246
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
EA + M G P+V +N ++ + C A+KL M GCS ++ T+NILI
Sbjct: 247 EAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI 306
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ G + A+ + M G P++ +Y LL G C+E + A E + V+
Sbjct: 307 NFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCY 366
Query: 538 LARSILSTFMISLCR 552
+T + +LC+
Sbjct: 367 PDIVTYNTLLTALCK 381
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
L +G L + + ++ M +G PD+ SL+ CR + A + + + SG +
Sbjct: 67 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ TYN+LIS + + GEI+ AL++ M VAPD TY ++L LC L+ A EV +
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183
Query: 530 KSVNHD 535
+ + +
Sbjct: 184 RQLQKE 189
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 95/240 (39%), Gaps = 14/240 (5%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQI 100
LR SPS+V I L L + + P +P LSY+ +L +++
Sbjct: 291 LRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKM 350
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--N 158
+ L + D Y ++ +L + A + N+ + + P + N
Sbjct: 351 DRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ--LSSKGCSPVLITYN 408
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK- 217
+++ L+ G + A+K+ DEM +G++ I + + K+ + + ++
Sbjct: 409 TVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGL 468
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
R N++ S I+ G CK ++ + A L + + CKP Y I+ E G
Sbjct: 469 GIRPNAITYNS-----IMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEG 523
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 148/566 (26%), Positives = 235/566 (41%), Gaps = 46/566 (8%)
Query: 14 SQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNW 73
SQ I + N R W + L P V +V+ L LAL FFN+
Sbjct: 40 SQFIATLRNIVRGKESWKIAFNDPF----ISTKLKPHHVEKVLLLTLDDT-RLALRFFNF 94
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQV---------KVNKITLD------ 118
NF HS +S+ ++ +L + S+L+ + +V + LD
Sbjct: 95 LGLHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALLDCFEKCD 154
Query: 119 ---SSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNA 173
S + +I S +Q K + +F ++ CE + P++ +L LA +D
Sbjct: 155 FISSLGFDLLIQSYVQEKRMFDSVLIFRLMR-QCE-LMPQVRTLGEVLNGLAKIRRVDMV 212
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLII 233
L +F E+ G+ + I FCE + M +++ E+S +N V VLI
Sbjct: 213 LVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEM---IQRMESSDLNVVVYNVLI- 268
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVA------EEFKLMGSVFEREVVLKKK 287
HG CK KRV EA ++ + L + + Y + +EF++ V + +
Sbjct: 269 HGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMI----- 323
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR 347
+LG P + GL + ++ +A +L + V NALI S+ D +
Sbjct: 324 -ELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCK-DGK 381
Query: 348 --SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
A + F M EKG T S L + C+R K D + + + YN
Sbjct: 382 FDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNS 441
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+++ C G L A EM KGL P V Y SL+ C + L A +L+ +M G
Sbjct: 442 LINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKG 501
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+ N T+ LIS + A RLF MLE+ + P+ TY ++EG C+E N AF
Sbjct: 502 IAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAF 561
Query: 526 EVFNKSVNHDVMLARSILSTFMISLC 551
E+ N+ V ++ + SLC
Sbjct: 562 ELLNQMVQKGLVPDTYTYRPLISSLC 587
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/497 (23%), Positives = 206/497 (41%), Gaps = 54/497 (10%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
Q T S ++Y +++ L ++ V+ ++ I L + SL++G +
Sbjct: 289 QKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEM----IELGFVPTEAALSSLVEGLRRK 344
Query: 137 ----KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
AF + N VK + N+L+ L DG D A +F EM +G+ + + +
Sbjct: 345 GKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTY 404
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL----IIHGFCKGKRVEEAFKV 248
+ I FC KL + L ++ ++ G I V +I+G CK + A
Sbjct: 405 SILIDSFCRRGKLDTAIHFLGKM------IMAGIKITVYPYNSLINGHCKLGNLSAAVSF 458
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
DE+ + KP ++Y + + G + E + + G+AP T + I L
Sbjct: 459 FDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFR 518
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
R+ +A L + ++ ++ N +I G + A N M++KG VP T
Sbjct: 519 ANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYT 578
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
L +LC + E + L + + Y+ ++ C GRLR+A GV +EM
Sbjct: 579 YRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMV 638
Query: 428 RKGLDPDVSFYNSLMEACCRED---------------LLRPAK----------------- 455
++G+D D+ Y L++ +E LRP K
Sbjct: 639 KRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVK 698
Query: 456 ---KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
+WD M GC+ N+ TY LI++ + G ++ A L+ ML P+ TY L
Sbjct: 699 KAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFL 758
Query: 513 EGLCQETNLQAAFEVFN 529
+ L +E +++ A ++ N
Sbjct: 759 DHLAREGSMEKAVQLHN 775
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/468 (20%), Positives = 206/468 (44%), Gaps = 4/468 (0%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y++++ SL + + + + K++ + + Y +I S + A ++
Sbjct: 369 YNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMI 428
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
I NSL+ G + A+ FDEM +G++ + + + I +C KL
Sbjct: 429 MAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLH 488
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ + E+ + + + +I + R+ +AF++ DE+ + P+ + Y +
Sbjct: 489 EAFRLYHEMTGK--GIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNV 546
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ E G+ + +L + + G+ P T YR I L R+CEAK+ + +
Sbjct: 547 MIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREH 606
Query: 327 FTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
F +++ +AL+ G R A+ M+++G L + L K + +
Sbjct: 607 FKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVF 666
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
+ K + D Y M+ +G +++A+G+ M +G P++ Y +L+
Sbjct: 667 GLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINEL 726
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+ L+ A+ LW +M S + N TY + + G +E A++L ++ML KG+ +
Sbjct: 727 CKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANT 785
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+Y L+ G C+ ++ A ++ ++ +++ + ST + CRR
Sbjct: 786 VSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRR 833
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/456 (20%), Positives = 190/456 (41%), Gaps = 15/456 (3%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
S A+ FF+ + + +SY S++ +++ + ++ I ++ +
Sbjct: 453 SAAVSFFDEMIDK-GLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTT 511
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
+I +L + AF +F+E+ N ++ +G A ++ ++M +G
Sbjct: 512 LISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKG 571
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
+ T + I C ++ + +D++ RE+ +N + L+ HG+CK R+ +
Sbjct: 572 LVPDTYTYRPLISSLCSTGRVCEAKKFIDDLH-REHFKLNEMCYSALL-HGYCKEGRLRD 629
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV-----VLKKKRKLGVAPRTNDY 299
A V E+ R D + Y ++ + G++ E++ +LK + P Y
Sbjct: 630 ALGVCREMVKRGVDMDLVCYAVLID-----GTIKEQDTSAVFGLLKNMHDQRLRPDKVIY 684
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIE 358
I G + +A + ++++ T + LI + A + + M+
Sbjct: 685 TSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLV 744
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
P T +L + ++ V+++ + + SYN++V C GR+ E
Sbjct: 745 SNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDM-LKGLLANTVSYNILVRGFCKLGRVEE 803
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A ++ EM + PD Y++++ CCR L A + WD M G + YN LI
Sbjct: 804 ATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIY 863
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
GE+ A L +M+ +GV P+ T+ SL G
Sbjct: 864 GCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHG 899
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 180/418 (43%), Gaps = 8/418 (1%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDE 179
Y +I +AF +++E+ + I P +L++ L + +A ++FDE
Sbjct: 474 YTSLISGYCNKGKLHEAFRLYHEM--TGKGIAPNTYTFTTLISALFRANRMTDAFRLFDE 531
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M + + + + + V I C+ + +L+++ ++ ++ + +I C
Sbjct: 532 MLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQK--GLVPDTYTYRPLISSLCST 589
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
RV EA K +D+L K + + Y + + G + + V ++ K GV Y
Sbjct: 590 GRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCY 649
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIE 358
I G I E+ L + + + D + ++I S + A ++ MI+
Sbjct: 650 AVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMID 709
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
+G P + T + L LCK D+ ++K + ++ + +Y + L G + +
Sbjct: 710 EGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEK 769
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A + +M KGL + YN L+ C+ + A KL D+M + + TY+ +I
Sbjct: 770 AVQLHNDM-LKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIY 828
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+ G ++GA+ + ML KG+ PD Y L+ G C L AFE+ + + V
Sbjct: 829 QCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGV 886
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 96/223 (43%), Gaps = 7/223 (3%)
Query: 332 DVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
+VLN L + +D +V F ++ G P + + ++ C+ + E+ + +
Sbjct: 198 EVLNGL-AKIRRVD--MVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRM 254
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
++D ++ YNV++ LC + R+ EA + + +KGL Y +L+ C+
Sbjct: 255 ESSDL--NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEF 312
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
+ D+M G + L+ G++ A L + + + G P Y +L
Sbjct: 313 EVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNAL 372
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI-SLCRR 553
+ LC++ A E+ K + + A + + +I S CRR
Sbjct: 373 INSLCKDGKFDEA-ELLFKEMGEKGLCANDVTYSILIDSFCRR 414
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 170/368 (46%), Gaps = 15/368 (4%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G D AL M M+ G T+ + I C + + ++LDE+ + G
Sbjct: 186 GRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEM------FLMGCS 239
Query: 228 IAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
V I+HG C R+ EA +++D + IR C P+ I Y + + L V E +
Sbjct: 240 ADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTM 299
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
L + +L V + I +++ ++ EA EL E + S D + LI +
Sbjct: 300 LGRVPELNVVL----FNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCK 355
Query: 344 IDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
+ SA+ M +KG P++ T + L + C+ D + + +V+S ++E
Sbjct: 356 LGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEG 415
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN M+ +C R+ +A +QEMK +G PD+ YN+++ C + + A+ L++ +
Sbjct: 416 YNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLL 475
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G N TYN LI G + A+ L ++M+ G + D +Y L++ LC++ N+
Sbjct: 476 HEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVD 535
Query: 523 AAFEVFNK 530
+ + ++
Sbjct: 536 RSIMLLSE 543
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 196/434 (45%), Gaps = 9/434 (2%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
++L+ + + D+ +Y+ +I +L +A ++ +E+ N ++ L
Sbjct: 193 TMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGL 252
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
+ G + A ++ D M RG + I +G + C +++ + +ML V + N ++
Sbjct: 253 CTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPEL-NVVLF 311
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+VI ++ G +++EA ++ + + + C PD Y I+ +G + +L
Sbjct: 312 NTVIGRCLLDG-----KLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLL 366
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
++ G AP Y + + + EV+ +++ + N +I +V
Sbjct: 367 REMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCK- 425
Query: 345 DPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
D R A+ F M +G P + T + + +LC N+ +E +++ L + +
Sbjct: 426 DRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAIT 485
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN ++ L +G ++A + +M G D+ YN L++A CR+ + + L +M
Sbjct: 486 YNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMA 545
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G N +YN+LIS+ + + AL L ML + + PD TY +L+ GLC+ +
Sbjct: 546 EKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMH 605
Query: 523 AAFEVFNKSVNHDV 536
AA + K N DV
Sbjct: 606 AALNLLEKLHNEDV 619
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 192/447 (42%), Gaps = 64/447 (14%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQV-KVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
++Y +LK L L+ Q+ ++L +V ++N + ++ + R L+ GK ++A ++
Sbjct: 278 ITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGR----CLLDGK-LKEAAELY- 331
Query: 144 EVKFNCEDIGPEICNS-------LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
E +G + C L+ L G + +A+K+ EM +G S + + + +
Sbjct: 332 ------ETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILL 385
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSM----INGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
FC N + +ML+ + + SM NG + AV CK +R+++A + + E+
Sbjct: 386 HSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAV------CKDRRMDDAMRFMQEM 439
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
+ + KPD Y + + E E + + GV Y I L+
Sbjct: 440 KSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSW 499
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
+A L +V ++D IV +N +I
Sbjct: 500 QDAISLANDMVLHGCSLD-------------------IVSYNGLI--------------- 525
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
K LC+ D + + ++ + SYN+++S LC + R+R+A + +EM + L
Sbjct: 526 KALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELT 585
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
PD+ YN+L+ C+ + A L +++ ++ TYNILIS + + A L
Sbjct: 586 PDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASML 645
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQET 519
+ + G+ P+ T+ +++ +++
Sbjct: 646 LNRAVTSGITPNERTWGIMVQNFVRKS 672
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 104/214 (48%), Gaps = 2/214 (0%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRV-PTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI S+ P A+ + + + V P+ + + + + + +++ +Y+ + D
Sbjct: 107 LIPLFRSLAPGRALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRD 166
Query: 396 YFTDME-SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++++ LC GR EA +++ M R G PD Y +++ A C + + A
Sbjct: 167 RVPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEA 226
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
L D+MF GCS ++ T+N ++ +G + A RL M+ +G P+A TY LL+G
Sbjct: 227 ATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKG 286
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
LC + ++ A + + +V+L +++ ++
Sbjct: 287 LCLASQVEEARTMLGRVPELNVVLFNTVIGRCLL 320
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 209/497 (42%), Gaps = 54/497 (10%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR-- 123
L L FF W+ ++ ++ + +L L+ S++ + + S L ++ N+ SSV+
Sbjct: 60 LVLRFFQWSQKEFRISYGLETTGKVLHLLANSKKYSKVRSFLDKLVKNEKHTVSSVFHSL 119
Query: 124 ---------------FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDG 168
++ + + A VF V+ + CN LL+ L
Sbjct: 120 LLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGN 179
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK--------REN 220
++ EM R ++ + F +FI C+ KL + ++++++ N
Sbjct: 180 ETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYN 239
Query: 221 SMINGS-----------VIAVL-----------------IIHGFCKGKRVEEAFKVLDEL 252
++I+G A+L +I GFCK + V A +E+
Sbjct: 240 TLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEM 299
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
+ + KP+ + Y + G + E + K LG+ P + I G ++ I
Sbjct: 300 QRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMI 359
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNL 371
EA++L + I + N +I + N M+++G P +ST + L
Sbjct: 360 KEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCL 419
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
LC+ ++ + + D+ +YN+++ C G +A ++ EM G+
Sbjct: 420 IAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGV 479
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
P+ YN+LM+ C E L+ A K+ QM G N+ TYN+LI F + G++E A R
Sbjct: 480 KPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANR 539
Query: 492 LFHNMLEKGVAPDATTY 508
L + MLEKG+ P+ TTY
Sbjct: 540 LLNEMLEKGLNPNRTTY 556
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 161/328 (49%), Gaps = 39/328 (11%)
Query: 226 SVIAVLIIHGFCKG-KRVEE-AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
+ + L IH C+ +RV++ FK L + C P ++ + E M V++ +
Sbjct: 139 AYVTNLEIHSACEVFRRVQDYGFK----LSLNSCNP-LLSALVKGNETGEMQYVYKEMI- 192
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI----- 338
KR+ + P + FI GL ++ +A+++ E I + F+ + N LI
Sbjct: 193 ---KRR--IQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCK 247
Query: 339 -GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
GS + AI+ M+ P T + L CK DE VL+A + F
Sbjct: 248 KGSAGKMYRADAIL--KEMLANKICPNEITFNTLIDGFCK----DE-----NVLAAKNAF 296
Query: 398 TDME---------SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+M+ +YN +++ L +G+L EA + +M GL P++ +N+L+ C++
Sbjct: 297 EEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKK 356
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
+++ A+KL+D + N T+N +I F + G +E L ++ML++G+ P+ +TY
Sbjct: 357 KMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTY 416
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDV 536
L+ GLC+ N++AA ++ N+ N+++
Sbjct: 417 NCLIAGLCRNQNVRAAKKLLNEMENYEL 444
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 96/196 (48%), Gaps = 3/196 (1%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVE---VYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
G P + T + L CK+ + ++ + K + AN + ++N ++ C +
Sbjct: 230 GFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENV 289
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
A +EM+R+GL P++ YNSL+ L A LWD+M G N+ T+N L
Sbjct: 290 LAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNAL 349
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I+ F + I+ A +LF ++ E+ + P+A T+ ++++ C+ ++ F + N ++ +
Sbjct: 350 INGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGI 409
Query: 537 MLARSILSTFMISLCR 552
S + + LCR
Sbjct: 410 FPNVSTYNCLIAGLCR 425
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 136/549 (24%), Positives = 229/549 (41%), Gaps = 70/549 (12%)
Query: 47 LSPSLVARVINP-YLLTHHSLALGFFNWASQQ-PNFTHSP-----------LSYHSILKS 93
L+P LV +++ L++ ++ + FF WA P F H+ S+ +
Sbjct: 48 LTPPLVLSILSSKTLISRPNILISFFKWAQTNLPTFPHNSLPSLLSLLPSLFSHRKFSDA 107
Query: 94 LSLSRQINAID-------SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
SL A D S+L+ +K LD++ I + +Q AF +F ++K
Sbjct: 108 KSLLLGFIATDRRHDLHLSILRLTSPSKALLDTA-----IGAYVQSGQPHHAFQIFKKMK 162
Query: 147 FNCEDIGPEI--CNSLLAVLA---SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ P + CN+LL L S + + + F++ G+ + F + I+ +C
Sbjct: 163 R--LRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCL 220
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
K + L+ + K S N V I+ CK R+ +A +L +++ R P+
Sbjct: 221 ENKFKDAVEFLNVMGKYNCSPDN--VTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNR 278
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
Y I+ + MG + E V++ + + P Y I GL E RI EA +L +
Sbjct: 279 NTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDE 338
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ + K D N LI G + A M EKG P T + + K CK K
Sbjct: 339 MENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGK 398
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
D+ + + + D +YN +++ C +G + EA+ + EM RK + D N+
Sbjct: 399 MDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNT 458
Query: 441 LMEACCREDLLRPAKKL-----------------------------------WDQMFASG 465
++ CRE L A KL WD+M
Sbjct: 459 ILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKE 518
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+ TYN +I + G+ E A+ + +LE G+ PD TTY ++L G C+E +++ AF
Sbjct: 519 IIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAF 578
Query: 526 EVFNKSVNH 534
+ NK V +
Sbjct: 579 QFHNKMVEN 587
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/475 (21%), Positives = 196/475 (41%), Gaps = 30/475 (6%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLA 162
+V++ + N + D Y +I L ++AF + +E++ N + + P++ N+L+
Sbjct: 299 NVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME-NLK-LLPDVVSYNTLIN 356
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
I A K+ +EMS +GV+ + + + + +C+ K+ + + + E+
Sbjct: 357 GCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTI--TKMEESGF 414
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
V +I+G+CK + EAF+ +DE+ + K D + + + E
Sbjct: 415 SPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYK 474
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+L RK G Y I+G + + A +L + + + N +IG +
Sbjct: 475 LLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLC 534
Query: 343 SI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
AI N ++E G +P +T + + C+ ++ + + + N + D+
Sbjct: 535 QCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVF 594
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+ N+++ LC G L +A + KG D YN+L+ + C+E L A L +M
Sbjct: 595 TCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEM 654
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP------------------ 503
+ TYN +I+ ++ G I A MLEKG P
Sbjct: 655 EEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETS 714
Query: 504 -----DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ Y+ ++ LC E + A +F +S + + +S M L +R
Sbjct: 715 EESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKR 769
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/455 (20%), Positives = 203/455 (44%), Gaps = 7/455 (1%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N + ++Y++IL +L ++ +L +K + + + Y ++ + ++A
Sbjct: 238 NCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEA 297
Query: 139 FSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+V + N ++ P++ N L+ L ++G I+ A K+ DEM + + + + I
Sbjct: 298 ANVIELMTQN--NLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLI 355
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
E +K+ + +L+E+ E + +V +++ +CK ++++A + ++
Sbjct: 356 NGCLEWSKISEAFKLLEEMS--EKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
PD + Y + + G++ E + + + + + + L E+++ EA
Sbjct: 414 FSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAY 473
Query: 317 ELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+L + ID+ LI G + A+ ++ M EK +P+ T + + L
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGL 533
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C+ K+++ + L + D +YN ++ C G + +A+ +M PDV
Sbjct: 534 CQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDV 593
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
N L+ C E +L A KL++ + G + + TYN LI+ + G ++ A L
Sbjct: 594 FTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSE 653
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
M EK + PD TY +++ L ++ A E +K
Sbjct: 654 MEEKELGPDHYTYNAIITALTDSGRIREAEEFMSK 688
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/511 (22%), Positives = 221/511 (43%), Gaps = 68/511 (13%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLS-----------------------LSRQINAI 103
AL F+ S++ + +P Y +I+ L+ SR ++
Sbjct: 53 ALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSV 112
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGP--EICNSLL 161
+VL +++ +K T +V+ +I + + ++A V+ ++ D+ P + CN +L
Sbjct: 113 FNVLSRLESSKFT--PNVFGVLIIAFSEMGLVEEALWVYYKM-----DVLPAMQACNMVL 165
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
L G D K++ +M RG + + +G I C + + DE+ E
Sbjct: 166 DGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI--EKK 223
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
+ VI ++I G C R+ EA + +R P+ Y + + + + V +
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
+ ++ G+ P + I GL C+ E+ + + KF ID
Sbjct: 284 ELYQEMLGDGLLPNVVTFGILIDGL------CKTDEM---VSARKFLID----------- 323
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
M G VP + + L CK E + ++ + ++ D+
Sbjct: 324 --------------MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVF 369
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y++++ LC R+ EA G++QEMK+KG P+ YN+L++ C+E + A ++ QM
Sbjct: 370 TYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G N+ T++ LI + + G++E A+ L+ M+ KG+ PD YT+L++G ++ N
Sbjct: 430 TEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNT 489
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ AF + + + LS + LC+
Sbjct: 490 KEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 154/368 (41%), Gaps = 36/368 (9%)
Query: 51 LVARVINPYLLTHHSL------------ALGFFNWASQQPNFTHSPLSYHSILKSLSLSR 98
+VAR +P ++T+ +L A F+ ++ F + + Y +++ L
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFP-TVVIYTILIRGLCGES 242
Query: 99 QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN 158
+I+ +S+ + ++ + + + Y ++ + + +KA ++ E+ + +
Sbjct: 243 RISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM----------LGD 292
Query: 159 SLLAVLASDGYIDNALKMFDEM-SHRGVEFSTIGFGV----FIWK-----FCENAKLGQV 208
LL + + G + + L DEM S R FGV F++ +C+ L +
Sbjct: 293 GLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEA 352
Query: 209 LSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVA 268
LS+ E+ K E ++ ++I G C R+EEA +L E++ + P+ + Y +
Sbjct: 353 LSLHSEIEKHE--ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFT 328
+ + G++ + V + + G+ P + I G ++ A L +V
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLL 470
Query: 329 IDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
D ALI G + + A M E G P + TLS L LCK + + +++
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530
Query: 388 YKVLSAND 395
+ + D
Sbjct: 531 FLAKTGTD 538
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 168/365 (46%), Gaps = 5/365 (1%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G I AL D++ G + +G I C K+G+ + L+ +R+ + ++ V
Sbjct: 277 GQIHQALHFHDKVIAMGFHLDQVSYGTLINGLC---KVGETKAALELLRRNDGKLVQPDV 333
Query: 228 IAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
+ II G CK K V +AF + E + PD Y + F ++G + + + K
Sbjct: 334 VMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNK 393
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP 346
+ P + + G + I EAK + +++ D ++L+ ++
Sbjct: 394 MTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNE 453
Query: 347 -RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
A FN M +G + + + + CK DE ++++K + F D+ +Y+
Sbjct: 454 VNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSS 513
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++ LC SGR+ A ++ EM +G PD+ YNS+++A C++ + A L ++ G
Sbjct: 514 LIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQG 573
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
++ TY IL+ + G++E A ++F ++L KG D YT +++G C + A
Sbjct: 574 IRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEAL 633
Query: 526 EVFNK 530
+ +K
Sbjct: 634 ALLSK 638
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 194/450 (43%), Gaps = 65/450 (14%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD------ 213
+L L + L + +M +G++ + + + I FC+ + S+L
Sbjct: 116 ILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNILINSFCQLGLIPFAFSVLTRGVYWI 175
Query: 214 EVRK----RENSMINGSVIAVLII-----HGFCKGKRVEEAFKVLDELRIR-ECKPDFIA 263
E+ K R+N + +++I F K F VL +I E FI
Sbjct: 176 EILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDFLQSRLFNVLHSFKILIEYHKTFIK 235
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+ + + F++ E K K G P T FI G ++ +I +A + ++
Sbjct: 236 QKCLLKSFEI-----SIEYTPPKILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVI 290
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRSA----------------IVFFNFMIE--------- 358
+ F +D LI + + A +V +N +I+
Sbjct: 291 AMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVN 350
Query: 359 -----------KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
K P + T + L C K + ++++ +++ + D+ +++++V
Sbjct: 351 DAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILV 410
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
C G ++EA V+ M ++ + PDV Y+SLM+ C + + A+ +++ M G +
Sbjct: 411 DGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVT 470
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N+++YNI+I+ F ++ ++ A++LF M K + PD TY+SL++GLC+ + A E+
Sbjct: 471 ANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALEL 530
Query: 528 FN----KSVNHDVMLARSILSTFMISLCRR 553
+ + D++ SIL +LC++
Sbjct: 531 VDEMHYRGQQPDIITYNSILD----ALCKK 556
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 130/306 (42%), Gaps = 1/306 (0%)
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
++ I GFC ++ +A D++ D ++Y + +G +L+
Sbjct: 263 TITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLR 322
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID 345
+ V P Y I G+ ++ + +A +L VS + D NALI +
Sbjct: 323 RNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVG 382
Query: 346 P-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
+ AI FN M K +P + T S L CK E V ++ D+ +Y+
Sbjct: 383 KLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYS 442
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
++ C + +A + M +G+ +V YN ++ C+ ++ A KL+ +M
Sbjct: 443 SLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHK 502
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
++ TY+ LI + G I AL L M +G PD TY S+L+ LC++ ++ A
Sbjct: 503 QIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKA 562
Query: 525 FEVFNK 530
+ K
Sbjct: 563 ITLLTK 568
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 51 LVARVINPYLLTHHSLALGF------------FNWASQQPNFTHSPLSYHSILKSLSLSR 98
++ + I P ++T+ SL G+ FN S + T + SY+ ++ +
Sbjct: 429 MMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHR-GVTANVQSYNIMINGFCKIK 487
Query: 99 QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN 158
++ + K++ +I D Y +I L + A + +E+ + + N
Sbjct: 488 MVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYN 547
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
S+L L ++D A+ + ++ +G+ + + + C++ K L++ RK
Sbjct: 548 SILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGK-------LEDARKV 600
Query: 219 -ENSMINGSVIAV----LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
E+ ++ G + V ++I GFC +EA +L ++ C PD Y I+
Sbjct: 601 FEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEII------ 654
Query: 274 MGSVFERE 281
+ S+FE++
Sbjct: 655 ILSLFEKD 662
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 189/409 (46%), Gaps = 14/409 (3%)
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
N DI P C +L+ G A K+ + + G I + V I +C+ ++
Sbjct: 133 NVPDIIP--CTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINN 190
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
LS+LD + S+ V I+ C ++++A +VLD + R+C PD I Y I+
Sbjct: 191 ALSVLDRM-----SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTIL 245
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-KELGEVIVSG- 325
E V + +L + R G P Y + G+ E R+ EA K L ++ SG
Sbjct: 246 IEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC 305
Query: 326 --KFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ +L ++ + +D A M+ KG P++ T + L LC++
Sbjct: 306 QPNVITHNIILRSMCSTGRWMD---AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+++ + + + + SYN ++ C ++ A ++ M +G PD+ YN+++
Sbjct: 363 AIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
A C++ + A ++ +Q+ + GCS L TYN +I ++ G+ A++L M K + P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
D TY+SL+ GL +E + A + F++ V ++ M+ LC+
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCK 531
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 189/423 (44%), Gaps = 10/423 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALK 175
D Y +I + A SV + + + P++ N++L L G + A++
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMS-----VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ D M R I + + I C ++ +GQ + +LDE+R R V ++++G
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDR--GCTPDVVTYNVLVNG 283
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
CK R++EA K L+++ C+P+ I + I+ G + E +L + G +P
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 343
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFN 354
+ I L + + A ++ E + + N L+ G AI +
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+ +G P + T + + LCK K ++ VE+ LS+ + +YN ++ L +G
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ +A ++ EM+ K L PD Y+SL+ RE + A K + + G N T+N
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFN 523
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
++ + + + A+ M+ +G P T+YT L+EGL E + A E+ N+ N
Sbjct: 524 SIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNK 583
Query: 535 DVM 537
+M
Sbjct: 584 GLM 586
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 154/317 (48%), Gaps = 8/317 (2%)
Query: 219 ENSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
EN + +G+V ++ +I GFC+ + +A K+L+ L PD I Y ++ +
Sbjct: 126 ENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKA 185
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G + VL + + V+P Y + L ++ +A E+ + ++ D
Sbjct: 186 GEINNALSVLDR---MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITY 242
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
LI + A+ + M ++G P + T + L +CK + DE ++ + +
Sbjct: 243 TILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ ++ ++N+++ +C++GR +A ++ +M RKG P V +N L+ CR+ LL
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A + ++M GC N +YN L+ F + +++ A+ M+ +G PD TY ++L
Sbjct: 363 AIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 514 GLCQETNLQAAFEVFNK 530
LC++ ++ A E+ N+
Sbjct: 423 ALCKDGKVEDAVEILNQ 439
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 13/203 (6%)
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F M+ G VP + + L + C+ K+ + ++ +VL + D+ +YNVM+S C
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYC 183
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+G + A V+ M + PDV YN+++ + C L+ A ++ D+M C ++
Sbjct: 184 KAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN-- 529
TY ILI + A++L M ++G PD TY L+ G+C+E L A + N
Sbjct: 241 TYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 530 -------KSVNHDVMLARSILST 545
+ H+++L RS+ ST
Sbjct: 301 PSSGCQPNVITHNIIL-RSMCST 322
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 142/315 (45%), Gaps = 10/315 (3%)
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+EE FK L+ + PD I + F MG + +L+ G P Y
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNV 177
Query: 302 FILGLIVERRICEAKELGEVI-VSGKFTIDDDVL--NALIGSV-SSIDPRSAIVFFNFMI 357
I G C+A E+ + V + ++ DV+ N ++ S+ S + A+ + M+
Sbjct: 178 MISGY------CKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
++ P + T + L + C+ + + +++ + D+ +YNV+V+ +C GRL
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
EA + +M G P+V +N ++ + C A+KL M G S ++ T+NILI
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ G + A+ + M + G P++ +Y LL G C+E + A E + V+
Sbjct: 352 NFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 538 LARSILSTFMISLCR 552
+T + +LC+
Sbjct: 412 PDIVTYNTMLTALCK 426
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 6/146 (4%)
Query: 392 SANDYFT--DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
SAN F D+ES N + L +G L E + ++ M G PD+ +L+ CR
Sbjct: 93 SANSSFVLEDVESNNHLRQ-LVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMG 151
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
R A K+ + + SG ++ TYN++IS + + GEI AL + M V+PD TY
Sbjct: 152 KTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYN 208
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHD 535
++L LC L+ A EV ++ + D
Sbjct: 209 TILRSLCDSGKLKQAMEVLDRMLQRD 234
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 98/244 (40%), Gaps = 14/244 (5%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQI 100
LR SPS+V I L L + + P P LSY+ +L +++
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKM 395
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--N 158
+ L+++ D Y ++ +L + + A + N+ + + P + N
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ--LSSKGCSPVLITYN 453
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK- 217
+++ LA G A+K+ DEM + ++ TI + + K+ + + E +
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
R N++ S I+ G CK ++ + A L + R CKP +Y I+ E G
Sbjct: 514 GVRPNAVTFNS-----IMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEG 568
Query: 276 SVFE 279
E
Sbjct: 569 MAKE 572
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 205/454 (45%), Gaps = 14/454 (3%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S +S++SIL L R+++ S+ + +K + +SS Y II L G ++A+ +
Sbjct: 219 SVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRIL 277
Query: 143 NEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+E++ + P + N ++ L ++ A K+F+ S RG + + I
Sbjct: 278 DEMEH--ASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLG 335
Query: 201 ENAKLGQVLSMLD---EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
+ ++ + + + + N ++ S+I IHG R E+ KV EL R C
Sbjct: 336 KKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG-----RKEDGHKVFKELIRRGC 390
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
KPD + G V + ++ + R G P Y I GL + E
Sbjct: 391 KPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSN 450
Query: 318 LGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+ + F +D NA++ G S A M EK PT++T + L
Sbjct: 451 IFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLA 510
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K ++ DE +++ + ++ Y+ ++ GR+ EAY +++EM +KGL P+V
Sbjct: 511 KIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY 570
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
+NSL++A + + + A + M C N TY+ILI+ V + A + +M
Sbjct: 571 TWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDM 630
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
++G+ P+ TYT+++ GL + N+ A+ +F +
Sbjct: 631 QKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 664
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/491 (21%), Positives = 216/491 (43%), Gaps = 11/491 (2%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
+A FF+ Q +SY S++ L + ++ + + Q++ + + Y +
Sbjct: 133 MACKFFHELKAQ-GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM 191
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHR 183
I + A+ + ++ P + NS+L L +D AL +F+ M +
Sbjct: 192 IMGYGSAGRFEDAYKLLERLRER--GCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-K 248
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRV 242
E ++ + + I C ++ + +LDE+ E++ + +++ V +++ CK +++
Sbjct: 249 DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEM---EHASLFPNLLTVNIMVDRLCKARKL 305
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
EEA+K+ + R C PD + Y + + G V E + +K G Y
Sbjct: 306 EEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSL 365
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGR 361
I + R + ++ + ++ D +LN + V + + + F + G
Sbjct: 366 IRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF 425
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
+P + + S L L K ++ E ++ + + D +YN +V C SG++ +AY
Sbjct: 426 LPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYE 485
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+++EMK K + P V+ Y ++++ + D L A L+++ + G N+ Y+ LI F
Sbjct: 486 ILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFG 545
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
+VG I+ A + M++KG+ P+ T+ SLL+ L + + A F
Sbjct: 546 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTY 605
Query: 542 ILSTFMISLCR 552
S + LCR
Sbjct: 606 TYSILINGLCR 616
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/500 (20%), Positives = 224/500 (44%), Gaps = 28/500 (5%)
Query: 42 GLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQIN 101
GL + L A ++ L LA+ +P F+ +Y ++ +L+ +R+
Sbjct: 7 GLPNQACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFS----AYTVLIGALAEARRPE 62
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLL 161
+L+Q++ + ++ ++ +L + A ++ +EVK +C + + N +
Sbjct: 63 RALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCI 122
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
G +D A K F E+ +G++ + + IW C+ +LG+ + ++ + E S
Sbjct: 123 DCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQM-EAERS 181
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY----------RIVAEEF 271
+ +I+ G+ R E+A+K+L+ LR R C P +++ R V E
Sbjct: 182 VPCAYAYNTMIM-GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 240
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
S+FE V+KK + P ++ Y I L + R+ EA + + + +
Sbjct: 241 ----SLFE---VMKKDAE----PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNL 289
Query: 332 DVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
+N ++ + A F ++G P T +L L K+ + DE +++
Sbjct: 290 LTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEK 349
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ + + Y ++ GR + + V +E+ R+G PD++ N+ M+ +
Sbjct: 350 MLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGE 409
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ + +++ + + G ++++Y+ILI ++ G+ +FH M ++G A DA Y +
Sbjct: 410 VEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNA 469
Query: 511 LLEGLCQETNLQAAFEVFNK 530
+++G C+ + A+E+ +
Sbjct: 470 VVDGFCKSGKVHKAYEILEE 489
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 177/394 (44%), Gaps = 4/394 (1%)
Query: 155 EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
+ C L A L +D+A+ M + + V I E + + L +L +
Sbjct: 11 QACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQ 70
Query: 215 VRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
++ E G + ++ + +V +A ++DE++ +PD + Y + + F
Sbjct: 71 MQ--EVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKA 128
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G+V + + G+ P Y I L R+ EA+EL + + +
Sbjct: 129 GNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAY 188
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N +I G S+ A + E+G +P++ + +++ L K+ K DE + +++V+
Sbjct: 189 NTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK- 247
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
D + +YN+++ LC GR+ EAY ++ EM+ L P++ N +++ C+ L
Sbjct: 248 KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEE 307
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A K+++ GC+ + TY LI + G+++ A RLF ML+ G + YTSL+
Sbjct: 308 AYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIR 367
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
+ +VF + + ++L+T+M
Sbjct: 368 NFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYM 401
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/244 (16%), Positives = 104/244 (42%), Gaps = 2/244 (0%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
A +Q F +Y++++ S +++ +L+++K + + Y I+ L +
Sbjct: 454 AMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKID 513
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
+A+ +F E K ++ + +SL+ G ID A + +EM +G+ + +
Sbjct: 514 RLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 573
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
+ + ++ + L + +E + ++I+G C+ ++ +AF +++
Sbjct: 574 SLLDALVKAEEINEALVCFQSM--KEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQ 631
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+ P+ + Y + +G++ + + ++ + G P + I G+ R
Sbjct: 632 KQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAM 691
Query: 314 EAKE 317
EA +
Sbjct: 692 EAYQ 695
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 198/445 (44%), Gaps = 9/445 (2%)
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
HS K+L Q +D+V+ +++ + D + ++ + + + + A ++ + +
Sbjct: 167 HSYCKTL----QFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVS 222
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
G NS+L L +G D A ++F M GV F + I FC +L +
Sbjct: 223 KGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEE 282
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHG-FCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
L E+R R + V++ + G F + ++ A + L E+R PD + Y +
Sbjct: 283 ALRFYKEMRGRR---VTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTM 339
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
V F G + E V + G P Y + GL ERR+ +A+EL +
Sbjct: 340 VIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERG 399
Query: 327 FTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
D LI G + A+ FF+ + ++ P + T + L +C++ +
Sbjct: 400 VPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKAN 459
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
E++ + + + F + +Y++++ C G++ A+ + EM KG+ P++ YNS+++
Sbjct: 460 ELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGY 519
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
CR + ++ +M +L TYN LI + + G++ A L M + V PDA
Sbjct: 520 CRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDA 579
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNK 530
TY ++ G N+Q A V+ K
Sbjct: 580 VTYNMIISGFSVHGNMQEADWVYKK 604
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 152/335 (45%), Gaps = 2/335 (0%)
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
NS +N + +++ H +CK + E V+ E+ R PD + + ++ + G V
Sbjct: 154 NSEVNTYTLNIMV-HSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEA 212
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
++ G+ P Y + GL+ R +A+E+ + + D N LIG
Sbjct: 213 AMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIG 272
Query: 340 S-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
+ + A+ F+ M + P + + S L +R + D E + +
Sbjct: 273 GFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMP 332
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D Y +++ C +G + EA V EM G PDV YN+L+ C+E L A++L
Sbjct: 333 DGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELL 392
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
++M G +L T+ LI + G IE AL+ F + ++ + PD TY +L++G+C++
Sbjct: 393 NEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQ 452
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+L A E+++ + ++ S + S C +
Sbjct: 453 GDLGKANELWDDMHSREIFPNHVTYSILIDSHCEK 487
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 183/441 (41%), Gaps = 48/441 (10%)
Query: 103 IDSVL-KQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNS 159
IDS++ K +K +T +S ++ L++ KA VF + + + P++ N
Sbjct: 217 IDSMVSKGIKPGLVTYNS-----VLKGLLRNGRWDKAREVFRAM--DACGVAPDVRSFNM 269
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ G ++ AL+ + EM R V + F I F ++ L E+R E
Sbjct: 270 LIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMR--E 327
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
++ VI ++I GFC+ + EA +V DE+ C PD + Y + + +
Sbjct: 328 FGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSD 387
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
E +L + ++ GV P + I G + I +A + + I + D N LI
Sbjct: 388 AEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLID 447
Query: 340 SVSS-----------------------------IDPR-------SAIVFFNFMIEKGRVP 363
+ ID +A F + M+ KG VP
Sbjct: 448 GMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVP 507
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ T +++ K C+ + + + + D+ +YN ++ G++ EA+ ++
Sbjct: 508 NIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLL 567
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+ M+ + + PD YN ++ ++ A ++ +M A G + TY +I+
Sbjct: 568 KIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVA 627
Query: 484 GEIEGALRLFHNMLEKGVAPD 504
G + + +L ML+KG+APD
Sbjct: 628 GNSKKSFQLHDEMLQKGLAPD 648
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 161/394 (40%), Gaps = 50/394 (12%)
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
E +T + + +C+ + G+V +++ E+ KR + V +++ + VE A
Sbjct: 156 EVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKR--CVFPDVVTHNVMVDARFRAGDVEAA 213
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
++D + + KP + Y V + G + V + GVAP + I G
Sbjct: 214 MALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGG 273
Query: 306 LIVERRICEAKELGEVI-----VSGKFTIDDDV-LNALIGSVSSI-DPRSAIVFFNFMIE 358
C A EL E + + G+ D V + LIG + + A + M E
Sbjct: 274 F------CRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMRE 327
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
G +P + + C+ E + V + A D+ +YN +++ LC RL +
Sbjct: 328 FGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSD 387
Query: 419 AYGVIQEMKRKG-----------------------------------LDPDVSFYNSLME 443
A ++ EMK +G L PD+ YN+L++
Sbjct: 388 AEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLID 447
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
CR+ L A +LWD M + N TY+ILI E G+++ A M+ KG+ P
Sbjct: 448 GMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVP 507
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ TY S+++G C+ N+ + K + VM
Sbjct: 508 NIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVM 541
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 91/190 (47%)
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
TL+ + + CK + E+ V + F D+ ++NVMV +G + A +I M
Sbjct: 161 TLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSM 220
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
KG+ P + YNS+++ R A++++ M A G + +++++N+LI F GE+
Sbjct: 221 VSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGEL 280
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
E ALR + M + V PD +++ L+ + + A E + +M I +
Sbjct: 281 EEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMV 340
Query: 547 MISLCRRVLI 556
+ CR L+
Sbjct: 341 IGGFCRAGLM 350
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 135/322 (41%), Gaps = 40/322 (12%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALK 175
D Y ++ L + + A + NE+K + P++C +L+ DG I+ AL+
Sbjct: 368 DVVTYNTLLNGLCKERRLSDAEELLNEMKE--RGVPPDLCTFTTLIHGYCRDGNIEKALQ 425
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
FD +S + + + + I C LG+ + D++ RE + V ++I
Sbjct: 426 FFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSRE--IFPNHVTYSILIDS 483
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
C+ +V+ AF LDE+ + P+ + Y + + + G+V + + L K R V P
Sbjct: 484 HCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPD 543
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNF 355
Y I G + E ++ EA L +++ + ++ P + V +N
Sbjct: 544 LITYNTLIHGYVKEGKMHEAFNLLKIMEN-----------------ENVQPDA--VTYNM 584
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
+I S N+ E VYK + A D +Y M++ +G
Sbjct: 585 IISG-----FSVHGNMQ----------EADWVYKKMGARGIEPDRYTYMSMINGHVVAGN 629
Query: 416 LREAYGVIQEMKRKGLDPDVSF 437
++++ + EM +KGL PD F
Sbjct: 630 SKKSFQLHDEMLQKGLAPDDKF 651
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 124/282 (43%), Gaps = 37/282 (13%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+++L L R+++ + +L ++K + D + +I + N +KA F+
Sbjct: 370 VTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDT 429
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ + + + P+I N+L+ + G + A +++D+M R + + + + + I CE
Sbjct: 430 I--SDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEK 487
Query: 203 AKLGQVLSMLDEVRKRE--------NSMING--------------------SVIAVLI-- 232
++ + LDE+ + NS+I G V+ LI
Sbjct: 488 GQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITY 547
Query: 233 ---IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
IHG+ K ++ EAF +L + +PD + Y ++ F + G++ E + V KK
Sbjct: 548 NTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGA 607
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
G+ P Y I G +V ++ +L + ++ DD
Sbjct: 608 RGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDD 649
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 205/454 (45%), Gaps = 14/454 (3%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S +S++SIL L R+++ S+ + +K + +SS Y II L G ++A+ +
Sbjct: 87 SVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRIL 145
Query: 143 NEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+E++ + P + N ++ L ++ A K+F+ S RG + + I
Sbjct: 146 DEMEH--ASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLG 203
Query: 201 ENAKLGQVLSMLD---EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
+ ++ + + + + N ++ S+I IHG R E+ K+ EL R C
Sbjct: 204 KKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG-----RKEDGHKIFKELIRRGC 258
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
KPD + G V + ++ + R G P Y I GL + E
Sbjct: 259 KPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSN 318
Query: 318 LGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+ + F +D NA++ G S A M EK PT++T + L
Sbjct: 319 IFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLA 378
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K ++ DE +++ + ++ Y+ ++ GR+ EAY +++EM +KGL P+V
Sbjct: 379 KIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY 438
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
+NSL++A + + + A + M C N TY+ILI+ V + A + +M
Sbjct: 439 TWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDM 498
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
++G+ P+ TYT+++ GL + N+ A+ +F +
Sbjct: 499 QKQGLVPNVVTYTTMISGLAKVGNITDAYSLFER 532
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/491 (21%), Positives = 216/491 (43%), Gaps = 11/491 (2%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
+A FF+ Q +SY S++ L + ++ + + Q++ + + Y +
Sbjct: 1 MAWKFFHELKAQ-GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM 59
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHR 183
I + A+ + ++ P + NS+L L +D AL +F+ M +
Sbjct: 60 IMGYGSAGRFEDAYKLLERLRE--RGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-K 116
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRV 242
E ++ + + I C ++ + +LDE+ E++ + +++ V +++ CK +++
Sbjct: 117 DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEM---EHASLFPNLLTVNIMVDRLCKARKL 173
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
EEA+K+ + R C PD + Y + + G V E + +K G Y
Sbjct: 174 EEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSL 233
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGR 361
I + R + ++ + ++ D +LN + V + + + F + G
Sbjct: 234 IRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF 293
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
+P + + S L L K ++ E ++ + + D +YN +V C SG++ +AY
Sbjct: 294 LPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYE 353
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+++EMK K + P V+ Y ++++ + D L A L+++ + G N+ Y+ LI F
Sbjct: 354 ILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFG 413
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
+VG I+ A + M++KG+ P+ T+ SLL+ L + + A F
Sbjct: 414 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTY 473
Query: 542 ILSTFMISLCR 552
S + LCR
Sbjct: 474 TYSILINGLCR 484
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/246 (16%), Positives = 105/246 (42%), Gaps = 2/246 (0%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
A +Q F +Y++++ S +++ +L+++K + + Y I+ L +
Sbjct: 322 AMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKID 381
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
+A+ +F E K ++ + +SL+ G ID A + +EM +G+ + +
Sbjct: 382 RLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 441
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
+ + ++ + L + +E + ++I+G C+ ++ +AF +++
Sbjct: 442 SLLDALVKAEEINEALVCFQSM--KEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQ 499
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+ P+ + Y + +G++ + + ++ + G P + I G+ R
Sbjct: 500 KQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAM 559
Query: 314 EAKELG 319
EA + G
Sbjct: 560 EAYQAG 565
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 128/559 (22%), Positives = 241/559 (43%), Gaps = 51/559 (9%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
KW P E+ L L LR + LV V+ + ++ + FF WA+++ N+ H +Y
Sbjct: 39 KWGPDAEKALEVLMLR--VDHWLVREVMKTDVGV--NVKMQFFRWAAKRRNYEHDTSTYM 94
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKI-TLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
+++ L + Q + +++++ N I + + ++ L K ++A ++F ++K
Sbjct: 95 ALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKT 154
Query: 148 -NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF-STIGFGVFIWKFCENAKL 205
C+ I + NS++ +L +G + ++++EMS G F T+ + I FC+ +
Sbjct: 155 RKCQPIA-QAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRR 213
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ +L+E+ +E M + I ++I F K A + +E+R + C+PD Y
Sbjct: 214 DSAIQLLNEM--KEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYT 271
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ G + E + ++ G P T I L R+ +A +L + + +
Sbjct: 272 ELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETL 331
Query: 326 KFTIDDDVLNALIGSV-------------------SSIDPRS------------------ 348
+ N +I ++ S I P S
Sbjct: 332 RCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEK 391
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A++ M EKG P + +L L K + D E+++ L N + Y VM+
Sbjct: 392 AMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIK 451
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L +GRL +A + EM + G PDV YN+LM R +L A +M GC
Sbjct: 452 HLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIP 511
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ +YNI+++ ++ G A+ + NM + V PD +Y ++L L + A ++
Sbjct: 512 DINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLM 571
Query: 529 NK----SVNHDVMLARSIL 543
+ +D++ SIL
Sbjct: 572 KEMNTLGFEYDLITYSSIL 590
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 155/355 (43%), Gaps = 20/355 (5%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLA 162
S+ ++++ D Y +I L + +A+ F E++ E P+ N+++
Sbjct: 253 SLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQR--EGCRPDTVFMNNMIN 310
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN-AKLGQVLSMLDEVRKRENS 221
L G +D+A+K+F EM S + + I E+ ++ +V S + R +E+
Sbjct: 311 FLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFE--RMKESG 368
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV------AEEFKLMG 275
+ S ++I GFCK R+E+A +L+E+ + P AY + A+ + L
Sbjct: 369 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAC 428
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+F+ + K G + Y I L R+ +A + + + D N
Sbjct: 429 ELFQ-----ELKENCG-SSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYN 482
Query: 336 ALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
AL+ ++ A+ M E G +P +++ + + L K +E+ + +
Sbjct: 483 ALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQS 542
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
D+ SYN ++ L +G EA +++EM G + D+ Y+S++EA + D
Sbjct: 543 TVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVD 597
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 109/265 (41%), Gaps = 5/265 (1%)
Query: 83 SPLSYHSILKSLSLSR-QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSV 141
S ++Y++I+K+L S+ + + + S +++K + I+ S Y +I + +KA +
Sbjct: 336 SVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMML 395
Query: 142 FNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
E+ P SL+ L D A ++F E+ S + V I +
Sbjct: 396 LEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGK 455
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+L ++M DE+ K + V A ++ G + ++EA + ++ C PD
Sbjct: 456 AGRLDDAINMFDEMNKLGCA---PDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPD 512
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+Y I+ G +L ++ V P Y + L EA +L +
Sbjct: 513 INSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMK 572
Query: 321 VIVSGKFTIDDDVLNALIGSVSSID 345
+ + F D ++++ ++ +D
Sbjct: 573 EMNTLGFEYDLITYSSILEAIGKVD 597
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 217/480 (45%), Gaps = 14/480 (2%)
Query: 66 LALGFFNWASQ-QPNFTHSPLSYHSILKSLSLS-RQINAIDSVLKQVKVNKITLDSSVYR 123
L LGF + + F +++ +LK L R +A+D VL+++ D Y
Sbjct: 108 LDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYN 167
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIG----PEIC--NSLLAVLASDGYIDNALKMF 177
++ L +Q+A + + + +D G P++ N++L +G D A +
Sbjct: 168 NLLKGLCDENRSQEALELLHMMA---DDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTY 224
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFC 237
EM RG+ + + I C+ + + + +L+ + K N ++ + I+HG+C
Sbjct: 225 HEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK--NGVMPDCMTYNSILHGYC 282
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
+ +EA L ++R +P+ + Y + G E + K G+ P
Sbjct: 283 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 342
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFM 356
YR + G + + E L +++V D V N LI + + + A++ F+ M
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
+ G P + + LCK D+ + ++ + ++ Y ++ LCT +
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW 462
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
+A +I EM +G+ + F+NS++++ C+E + ++KL+D M G ++ TYN L
Sbjct: 463 DKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTL 522
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I G+++ A +L +M+ GV PD TY +L+ G C+ + + A +F + V+ V
Sbjct: 523 IDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGV 582
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 174/393 (44%), Gaps = 17/393 (4%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
++A +FDE+ RG S G + ++ V S + + + + +V
Sbjct: 37 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAV-SRYNRMARAGAGKVTPTVHTY 95
Query: 231 LIIHGFC-KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER------EVV 283
I+ G C + R++ F L + + + D I + + L G ++ ++V
Sbjct: 96 AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPL-----LKGLCADKRTSDAMDIV 150
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS--GKFTIDDDVL--NALIG 339
L++ +LG P Y + GL E R EA EL ++ G + D V L G
Sbjct: 151 LRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNG 210
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
D A ++ M+++G +P + T S++ LCK D+ +EV + N D
Sbjct: 211 FFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPD 270
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+YN ++ C+SG+ +EA G +++M+ G++P+V Y+SLM C+ A+K++D
Sbjct: 271 CMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFD 330
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
M G ++ TY L+ ++ G + L M+ G+ PD + L+ ++
Sbjct: 331 SMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQE 390
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ A VF+K H + T + LC+
Sbjct: 391 KVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCK 423
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 168/401 (41%), Gaps = 13/401 (3%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ G +D + +G I F + C + + + D V +R
Sbjct: 98 LIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM---DIVLRRM 154
Query: 220 NSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDEL---RIRECKPDFIAYRIVAEEFK 272
+ G + V ++ G C R +EA ++L + R PD ++Y V F
Sbjct: 155 TEL--GCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFF 212
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
G + + G+ P Y I L + + +A E+ +V D
Sbjct: 213 KEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 272
Query: 333 VLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
N+++ G SS P+ AI M G P + T S+L LCK +S E +++ +
Sbjct: 273 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 332
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+ D+ +Y ++ T G L E + ++ M R G+ PD +N L+ A +++ +
Sbjct: 333 TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKV 392
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A ++ +M G + N+ Y +I + G ++ A+ F M+++G+ P+ YTSL
Sbjct: 393 DQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 452
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ GLC A E+ + ++ + L ++ + S C+
Sbjct: 453 IHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCK 493
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 194/431 (45%), Gaps = 7/431 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++L+ + + + ++L + N I D V+ +I + + + +A VF+++
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ + + P + +++ VL G +D+A+ F++M G+ + I + I C
Sbjct: 403 RQH--GLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCD 460
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
K + ++ E+ R + ++ II CK RV E+ K+ D + KPD I
Sbjct: 461 KWDKAEELILEMLDR--GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 518
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + L G + E +L +GV P Y I G R+ +A L + +V
Sbjct: 519 YNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMV 578
Query: 324 SGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
S + + N ++ G + +A + + + G LST + + LCK N +D
Sbjct: 579 SSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTD 638
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E + +++ L D + ++N+M+ L GR+ EA + GL PDV Y+ +
Sbjct: 639 EALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMA 698
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
E + L L+ M +GCS + + N ++ K + G+I A + EK +
Sbjct: 699 ENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFS 758
Query: 503 PDATTYTSLLE 513
+A+T + LLE
Sbjct: 759 LEASTASFLLE 769
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 109/521 (20%), Positives = 216/521 (41%), Gaps = 55/521 (10%)
Query: 58 PYLLTHHSLALGFFNWASQQPNFT--HSPL---------SYHSILKSLSLSRQINAIDSV 106
P +++++++ GFF ++ H L +Y SI+ +L ++ ++ V
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEV 258
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVL 164
L + N + D Y I+ ++A K + + P + +SL+ L
Sbjct: 259 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLK--KMRSDGVEPNVVTYSSLMNYL 316
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
+G A K+FD M+ RG+E + + + L ++ ++LD + R +
Sbjct: 317 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLD-LMVRNGIQPD 375
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
V +LI + K ++V++A V ++R P+ + Y V + GSV + +
Sbjct: 376 HHVFNILIC-AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 434
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
++ G+ P Y I GL + +A+EL ++ ++ N++I S
Sbjct: 435 EQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCK- 493
Query: 345 DPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
+ R + F+ M+ G P + T + L C K DE ++ + + D+ +
Sbjct: 494 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 553
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y +++ C R+ +A + +EM G+ P++ YN +++ AK+L+ +
Sbjct: 554 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 613
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM------LE------------------ 498
SG L TYNI++ + + ALR+F N+ LE
Sbjct: 614 KSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMD 673
Query: 499 -----------KGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
G+ PD TY+ + E L ++ +L+ ++F
Sbjct: 674 EAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLF 714
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/499 (20%), Positives = 210/499 (42%), Gaps = 38/499 (7%)
Query: 50 SLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPL-------------SYHSILKSLSL 96
++V + P +T++S+ G+ +S QP L +Y S++ L
Sbjct: 261 TMVKNGVMPDCMTYNSILHGY--CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK 318
Query: 97 SRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF----SVFNEVKFNCEDI 152
+ + + + + D + YR +L+QG T+ A ++ + + N
Sbjct: 319 NGRSTEARKIFDSMTKRGLEPDIATYR----TLLQGYATKGALVEMHALLDLMVRNGIQP 374
Query: 153 GPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL--- 209
+ N L+ A +D A+ +F +M G+ + + +G I C++ + +
Sbjct: 375 DHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 434
Query: 210 -SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVA 268
M+DE + ++ +IHG C + ++A +++ E+ R + I + +
Sbjct: 435 EQMIDE------GLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSII 488
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFT 328
+ G V E E + ++GV P Y I G + ++ EA +L +VS
Sbjct: 489 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVK 548
Query: 329 IDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
D LI VS +D A+ F M+ G P + T + + + L ++
Sbjct: 549 PDIVTYGTLINGYCRVSRMD--DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
E+Y ++ + ++ +YN+++ LC + EA + Q + L + +N ++ A
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 666
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
+ + AK L+ A+G +++TY+++ E G +E LF +M E G + D+
Sbjct: 667 LKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADS 726
Query: 506 TTYTSLLEGLCQETNLQAA 524
S++ L Q ++ A
Sbjct: 727 RMLNSIVRKLLQRGDITRA 745
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 134/557 (24%), Positives = 235/557 (42%), Gaps = 68/557 (12%)
Query: 40 QLGLRDSLSPSLVARVINPYLLTHH---SLALGFFNW-----------------ASQQPN 79
Q L L+P+L +I+ LL+ H LAL F S+ P
Sbjct: 69 QWHLIKHLAPNLSPSLISATLLSLHKKSDLALQFVTHIGFKGLDIKTKCLAVAVVSRSP- 127
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITL---DSSVYRFIIPSLIQGKNTQ 136
SP S +LK ++ ++ + V ++ + + L S V+ +I + + K
Sbjct: 128 ---SPKSTLHLLKQ-TIESRVAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGD 183
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
AF F+ +K E N++L++ + ++ EM ++ + F + I
Sbjct: 184 DAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMI 243
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIR 255
C+ KL + D + EN + +V+ +IHG+C RVE A VLD ++ R
Sbjct: 244 NVLCKEGKLKKAK---DFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNR 300
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG---------- 305
+PD Y + G + E +L+K +++G+ P Y I G
Sbjct: 301 GVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKA 360
Query: 306 -------------------------LIVERRICEAKELGEVIVSGKFTIDDDVLNALI-G 339
L +E ++ EA + + + D N LI G
Sbjct: 361 FGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILING 420
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ + A + MI KG PTL T ++L L KRN+ ++++ + D
Sbjct: 421 YCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPD 480
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ +N ++ C +G L A+ +++EM ++ + PD YN+LM+ CRE + A++L
Sbjct: 481 LIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLK 540
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M G + +YN LIS +S+ G+I A + ML G P TY +L++GLC+
Sbjct: 541 EMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQ 600
Query: 520 NLQAAFEVFNKSVNHDV 536
A E+ + V+ +
Sbjct: 601 QGDLAEELLKEMVSKGI 617
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 200/430 (46%), Gaps = 14/430 (3%)
Query: 94 LSLSRQINAIDSV-LKQVKVNKITLDSSVYRF--IIPSLIQGKNTQKAFSVFNEVKFNCE 150
LSL ++N ++V + ++ ++ + S+VY F +I L + +KA + E
Sbjct: 208 LSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSM----E 263
Query: 151 DIG--PEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
++G P + N+++ S G ++ A + D M +RGVE + +G I C+ KL
Sbjct: 264 NLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLE 323
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ +L++++ E ++ +V +I G+C + +AF DE+ R P Y +
Sbjct: 324 EASGILEKMK--EIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNL 381
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ L G + E + ++K G+ P + Y I G +A L + ++S
Sbjct: 382 LIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKG 441
Query: 327 FTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
+LI +S + ++A F +I +G P L + L C D
Sbjct: 442 IQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAF 501
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
+ K + + D +YN ++ C G++ EA +++EMKR+G+ PD YN+L+
Sbjct: 502 ALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGY 561
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
+ + A + D+M + G + L TYN LI + + + A L M+ KG+ PD
Sbjct: 562 SKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDD 621
Query: 506 TTYTSLLEGL 515
+TY SL+EG+
Sbjct: 622 STYFSLIEGI 631
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 160/386 (41%), Gaps = 44/386 (11%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D+A + FD M +GV F + F + + V + E+ + + I +V
Sbjct: 183 DDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLK---IKSTVYTF 239
Query: 231 -LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
++I+ CK ++++A + + KP+ + Y V + G V +VL +
Sbjct: 240 NIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKN 299
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSA 349
GV P + Y I G+ C+ +L E SG
Sbjct: 300 RGVEPDSYTYGSLISGM------CKGGKLEEA--SG------------------------ 327
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV---LSANDYFTDMESYNVM 406
M E G +PT T + L C NK D LV+ + + + +YN++
Sbjct: 328 --ILEKMKEIGLLPTAVTYNTLIDGYC--NKGD-LVKAFGYRDEMVRRAILPTVSTYNLL 382
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ L G++ EA G+I++M G+ PD YN L+ CR + A L D+M + G
Sbjct: 383 IHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGI 442
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
L TY LI S+ ++ A LF ++ +G +PD + +L++G C NL AF
Sbjct: 443 QPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFA 502
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+ + +++ +T M CR
Sbjct: 503 LLKEMDKRNIVPDEVTYNTLMQGRCR 528
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 127/265 (47%), Gaps = 6/265 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+ ++ +L L +++ D ++K + + I DS Y +I + N +KAF++ +E+
Sbjct: 378 TYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEM 437
Query: 146 KFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ I P + SL+ VL+ + A +F+++ G I F I C N
Sbjct: 438 I--SKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANG 495
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
L + ++L E+ KR +++ V ++ G C+ +VEEA ++L E++ R +PD I+
Sbjct: 496 NLDRAFALLKEMDKR--NIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHIS 553
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + G + + + + +G P Y I GL ++ A+EL + +V
Sbjct: 554 YNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMV 613
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRS 348
S T DD +LI + +D S
Sbjct: 614 SKGITPDDSTYFSLIEGIGKVDDSS 638
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 210/438 (47%), Gaps = 20/438 (4%)
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMS 181
F++ SL++ +K++ VF ++ + + P++ ++ + G +++A+++F +M
Sbjct: 284 FLLSSLVKANELEKSYWVFETMR---QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDME 340
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI-----IHGF 236
GV + + + I C++ L DE + + M+ V A LI I+G
Sbjct: 341 KLGVSPNVVTYNNLIHGLCKHGNL-------DEAFRFKEKMVKDGVNATLITYSVLINGL 393
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
K ++ EA VL E + P+ + Y + + + MG++ + + G+ P +
Sbjct: 394 MKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNS 453
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFN 354
I G ++ +A+ + E ++S F+I+ +I + ++ R SA+ F
Sbjct: 454 VTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLC-MNSRFESALRFLR 512
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+ + P L+ L LCK K + VE++ L + ++ + N ++ LC +G
Sbjct: 513 EMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTG 572
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
++EA ++++M +G D YN+L+ CC+E + KL +M G + TYN
Sbjct: 573 NMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYN 632
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
+LI +G+++ A+ L++ + + P+ TY +++G C+ ++ ++F + +
Sbjct: 633 LLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ 692
Query: 535 DVMLARSILSTFMISLCR 552
++ L + +T + + CR
Sbjct: 693 NLELNSVVYNTLIRAYCR 710
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 193/436 (44%), Gaps = 17/436 (3%)
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEIC--NSLLAVLASDGYI 170
++ D ++ I + +G + A +F F+ E +G P + N+L+ L G +
Sbjct: 309 VSPDVYLFSTAINAFCKGGKVEDAIQLF----FDMEKLGVSPNVVTYNNLIHGLCKHGNL 364
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D A + ++M GV + I + V I + K + S+L E E V+
Sbjct: 365 DEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETL--EKGFTPNEVVYN 422
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I G+CK + +A ++ ++ + P+ + + + F +G + + E +L++
Sbjct: 423 TLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSR 482
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
G + + I L + R A ++ +D +L L+G + S
Sbjct: 483 GFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDA 542
Query: 351 VFFNF-MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
V F ++EKG L T + L LCK E V + K + + D +YN ++S
Sbjct: 543 VELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISG 602
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
C G++ E + + EM ++G++PD YN L+ CR L A LW++ + N
Sbjct: 603 CCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPN 662
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ TY ++I + + +IE +LF +L + + ++ Y +L+ C+ N AF++
Sbjct: 663 VYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL-- 720
Query: 530 KSVNHDVMLARSILST 545
HD M ++ I T
Sbjct: 721 ----HDDMRSKGIPPT 732
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 182/430 (42%), Gaps = 6/430 (1%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
Y +I L++ + +A SV E + N+L+ G + +AL++ +M
Sbjct: 385 TYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDM 444
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
+G+ +++ I FC+ ++ Q +L+E+ R S+ G+ IIH C
Sbjct: 445 VSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTT--IIHWLCMNS 502
Query: 241 RVEEAFKVLDELRIRECKP-DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
R E A + L E+ +R +P D + +V K E+ + K G
Sbjct: 503 RFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK-GFGANLVTT 561
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIE 358
I GL + EA L + ++ F +D N LI G M++
Sbjct: 562 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 621
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
+G P T + L +C+ K DE V ++ + D ++ +Y VM+ C + ++ E
Sbjct: 622 QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 681
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
+ E+ + L+ + YN+L+ A CR A KL D M + G TY+ LI
Sbjct: 682 GEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIH 741
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+G +E A L M ++G+ P+ YT+L+ G C+ + V + ++D+
Sbjct: 742 GMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIH- 800
Query: 539 ARSILSTFMI 548
I T MI
Sbjct: 801 PNKITYTVMI 810
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 191/475 (40%), Gaps = 40/475 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++ L + N +SVLK+ T + VY +I + N A + +
Sbjct: 384 ITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGD 443
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + NS++ G ++ A + +EM RG + F I C N++
Sbjct: 444 MVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSR 503
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L L E+ R N N ++ L+ G CK + +A ++ L + + +
Sbjct: 504 FESALRFLREMLLR-NMRPNDGLLTTLV-GGLCKEGKHSDAVELWFRLLEKGFGANLVTT 561
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIV 323
+ G++ E +LKK + G Y I G E ++ E +L GE++
Sbjct: 562 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 621
Query: 324 SGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
G D N LI + I A+ +N + VP + T + CK +K +
Sbjct: 622 QG-IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIE 680
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E +++ L + + YN ++ C +G EA+ + +M+ KG+ P + Y+SL+
Sbjct: 681 EGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLI 740
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLK------------------------------- 471
C + AK L D+M G N+
Sbjct: 741 HGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIH 800
Query: 472 ----TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
TY ++I +S+ G+++ A +L H M+ KG+ PD TY L G C+E ++
Sbjct: 801 PNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE 855
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 130/300 (43%), Gaps = 36/300 (12%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L++ +G ++ K+ EM +G+E T + + I C KL + +++ +E +
Sbjct: 597 NTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKS 656
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R+ ++ ++I G+CK ++EE K+ EL + + + + Y + + G+
Sbjct: 657 RD--LVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 714
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E + R G+ P T Y I G+ R+ +AK L ID+
Sbjct: 715 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCL----------IDE------ 758
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
M ++G +P + + L CK + D++V V + +S+ D
Sbjct: 759 ------------------MRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIH 800
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
+ +Y VM+ SG ++ A ++ EM KG+ PD YN L C+E + K L
Sbjct: 801 PNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLL 860
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 105/204 (51%), Gaps = 5/204 (2%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
R+AI F F+ KG PT+ T + L +L K N+ ++ V++ + D+ ++
Sbjct: 261 RNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQG-VSPDVYLFSTA 319
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
++ C G++ +A + +M++ G+ P+V YN+L+ C+ L A + ++M G
Sbjct: 320 INAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGV 379
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF- 525
+ L TY++LI+ ++ + A + LEKG P+ Y +L++G C+ NL A
Sbjct: 380 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR 439
Query: 526 ---EVFNKSVNHDVMLARSILSTF 546
++ +K +N + + SI+ F
Sbjct: 440 IRGDMVSKGINPNSVTLNSIIQGF 463
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 101/236 (42%), Gaps = 2/236 (0%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y+ ++ + +++ ++ + K + + Y +I + ++ +F E
Sbjct: 629 FTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTE 688
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ ++ + N+L+ +G A K+ D+M +G+ +T + I C +
Sbjct: 689 LLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGR 748
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ ++DE+RK ++ V +I G+CK ++++ VL E+ + P+ I Y
Sbjct: 749 MEDAKCLIDEMRKE--GLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITY 806
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
++ + + G + +L + G+ P T Y G E +I E K L E
Sbjct: 807 TVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAE 862
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/521 (22%), Positives = 206/521 (39%), Gaps = 84/521 (16%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
+L +F S F H+ L+Y +++ L + +++ + +L+Q+K+ + +++F+I
Sbjct: 57 SLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVI 116
Query: 127 PSLIQGKNTQKAFSVFNEVK-FNC--------------------------------EDIG 153
+ ++ +F ++ F C E +
Sbjct: 117 KCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLE 176
Query: 154 PEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM 211
P + N LL L +G +D A K+ EMS++G + + + I C KLG V
Sbjct: 177 PNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMC---KLGDV--- 230
Query: 212 LDEVRKRENSMINGSVIAVL--IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+ RE +M V+ V +IHG CK R +EAF +++E+ R P+ I+Y V
Sbjct: 231 ---DKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVIS 287
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
MG+V V + G P + I G V R+ +
Sbjct: 288 CLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGD--------------- 332
Query: 330 DDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
A+ +N MI +G P + + L LC DE + V+
Sbjct: 333 -------------------AVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWN 373
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+ + ++ +Y+ ++ SG L A +M G P+V Y +++ C+
Sbjct: 374 QMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMS 433
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
+ A L D M + GC + T+N I G +E A+ + M + P+ TY
Sbjct: 434 MFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYN 493
Query: 510 SLLEGLCQETNLQAAF----EVFNKSVNHDVMLARSILSTF 546
LL+GL + + A E+ + V D + +I+ F
Sbjct: 494 ELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGF 534
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/192 (18%), Positives = 82/192 (42%), Gaps = 11/192 (5%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+++++ +K L + ++ +VL Q++ + + Y ++ L + ++A + E
Sbjct: 455 ITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRE 514
Query: 145 -----VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
V+F+C N+++ + +G L++ +M G++ TI + +
Sbjct: 515 LEERKVEFDCVTY-----NTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAY 569
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
C+ K+ + +LD + E + +I+ G C EEA L E+ R P
Sbjct: 570 CKLGKVKTAIKVLDNISA-EKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFP 628
Query: 260 DFIAYRIVAEEF 271
+ + ++ F
Sbjct: 629 NIATWNVLVRGF 640
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 122/534 (22%), Positives = 223/534 (41%), Gaps = 49/534 (9%)
Query: 66 LALGFFNWASQ-QPNFTHSPLSYHSILKSLSLS-RQINAIDSVLKQVKVNKITLDSSVYR 123
L LGF + + F +++ +LK L R +A+D VL+++ D Y
Sbjct: 108 LDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYN 167
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIG----PEIC--NSLLAVLASDGYIDNALKMF 177
++ L +Q+A + + + +D G P++ N++L +G D A +
Sbjct: 168 NLLKGLCDENRSQEALELLHMMA---DDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTY 224
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFC 237
EM RG+ + + I C+ + + + +L+ + K N ++ + I+HG+C
Sbjct: 225 HEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK--NGVMPDCMTYNSILHGYC 282
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
+ +EA L ++R +P+ + Y + G E + K G+ P
Sbjct: 283 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 342
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI------------------- 338
YR + G + + E L +++V D V N LI
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402
Query: 339 ------------GSVSSIDPRS-----AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
G+V + +S A+++F MI++G P + ++L LC +K
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW 462
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
D+ E+ + + +N ++ C GR+ E+ + M R G+ PD+ YN+L
Sbjct: 463 DKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTL 522
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
++ CC + A KL M + G ++ TY LI+ + V ++ AL LF M+ GV
Sbjct: 523 IDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGV 582
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
+P+ TY +L+GL AA E++ L S + + LC+ L
Sbjct: 583 SPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNL 636
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 174/393 (44%), Gaps = 17/393 (4%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
++A +FDE+ RG S G + ++ V S + + + + +V
Sbjct: 37 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAV-SRYNRMARAGAGKVTPTVHTY 95
Query: 231 LIIHGFC-KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER------EVV 283
I+ G C + R++ F L + + + D I + + L G ++ ++V
Sbjct: 96 AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPL-----LKGLCADKRTSDAMDIV 150
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS--GKFTIDDDVL--NALIG 339
L++ +LG P Y + GL E R EA EL ++ G + D V L G
Sbjct: 151 LRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNG 210
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
D A ++ M+++G +P + T S++ LCK D+ +EV + N D
Sbjct: 211 FFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPD 270
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+YN ++ C+SG+ +EA G +++M+ G++P+V Y+SLM C+ A+K++D
Sbjct: 271 CMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFD 330
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
M G ++ TY L+ ++ G + L M+ G+ PD + L+ ++
Sbjct: 331 SMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQE 390
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ A VF+K H + T + LC+
Sbjct: 391 KVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCK 423
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 168/401 (41%), Gaps = 13/401 (3%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ G +D + +G I F + C + + + D V +R
Sbjct: 98 LIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM---DIVLRRM 154
Query: 220 NSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDEL---RIRECKPDFIAYRIVAEEFK 272
+ G + V ++ G C R +EA ++L + R PD ++Y V F
Sbjct: 155 TEL--GCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFF 212
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
G + + G+ P Y I L + + +A E+ +V D
Sbjct: 213 KEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 272
Query: 333 VLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
N+++ G SS P+ AI M G P + T S+L LCK +S E +++ +
Sbjct: 273 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 332
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+ D+ +Y ++ T G L E + ++ M R G+ PD +N L+ A +++ +
Sbjct: 333 TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKV 392
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A ++ +M G + N+ Y +I + G ++ A+ F M+++G+ P+ YTSL
Sbjct: 393 DQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 452
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ GLC A E+ + ++ + L ++ + S C+
Sbjct: 453 IHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCK 493
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 194/431 (45%), Gaps = 7/431 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++L+ + + + ++L + N I D V+ +I + + + +A VF+++
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ + + P + +++ VL G +D+A+ F++M G+ + I + I C
Sbjct: 403 RQH--GLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCD 460
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
K + ++ E+ R + ++ II CK RV E+ K+ D + KPD I
Sbjct: 461 KWDKAEELILEMLDR--GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 518
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + L G + E +L +GV P Y I G R+ +A L + +V
Sbjct: 519 YNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMV 578
Query: 324 SGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
S + + N ++ G + +A + + + G LST + + LCK N +D
Sbjct: 579 SSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTD 638
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E + +++ L D + ++N+M+ L GR+ EA + GL PDV Y+ +
Sbjct: 639 EALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMA 698
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
E + L L+ M +GCS + + N ++ K + G+I A + EK +
Sbjct: 699 ENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFS 758
Query: 503 PDATTYTSLLE 513
+A+T + LLE
Sbjct: 759 LEASTASFLLE 769
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 109/521 (20%), Positives = 216/521 (41%), Gaps = 55/521 (10%)
Query: 58 PYLLTHHSLALGFFNWASQQPNFT--HSPL---------SYHSILKSLSLSRQINAIDSV 106
P +++++++ GFF ++ H L +Y SI+ +L ++ ++ V
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEV 258
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVL 164
L + N + D Y I+ ++A K + + P + +SL+ L
Sbjct: 259 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLK--KMRSDGVEPNVVTYSSLMNYL 316
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
+G A K+FD M+ RG+E + + + L ++ ++LD + R +
Sbjct: 317 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLD-LMVRNGIQPD 375
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
V +LI + K ++V++A V ++R P+ + Y V + GSV + +
Sbjct: 376 HHVFNILIC-AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 434
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
++ G+ P Y I GL + +A+EL ++ ++ N++I S
Sbjct: 435 EQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCK- 493
Query: 345 DPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
+ R + F+ M+ G P + T + L C K DE ++ + + D+ +
Sbjct: 494 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 553
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y +++ C R+ +A + +EM G+ P++ YN +++ AK+L+ +
Sbjct: 554 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 613
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM------LE------------------ 498
SG L TYNI++ + + ALR+F N+ LE
Sbjct: 614 KSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMD 673
Query: 499 -----------KGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
G+ PD TY+ + E L ++ +L+ ++F
Sbjct: 674 EAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLF 714
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/499 (20%), Positives = 210/499 (42%), Gaps = 38/499 (7%)
Query: 50 SLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPL-------------SYHSILKSLSL 96
++V + P +T++S+ G+ +S QP L +Y S++ L
Sbjct: 261 TMVKNGVMPDCMTYNSILHGY--CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK 318
Query: 97 SRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF----SVFNEVKFNCEDI 152
+ + + + + D + YR +L+QG T+ A ++ + + N
Sbjct: 319 NGRSTEARKIFDSMTKRGLEPDIATYR----TLLQGYATKGALVEMHALLDLMVRNGIQP 374
Query: 153 GPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL--- 209
+ N L+ A +D A+ +F +M G+ + + +G I C++ + +
Sbjct: 375 DHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 434
Query: 210 -SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVA 268
M+DE + ++ +IHG C + ++A +++ E+ R + I + +
Sbjct: 435 EQMIDE------GLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSII 488
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFT 328
+ G V E E + ++GV P Y I G + ++ EA +L +VS
Sbjct: 489 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVK 548
Query: 329 IDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
D LI VS +D A+ F M+ G P + T + + + L ++
Sbjct: 549 PDIVTYGTLINGYCRVSRMD--DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
E+Y ++ + ++ +YN+++ LC + EA + Q + L + +N ++ A
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 666
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
+ + AK L+ A+G +++TY+++ E G +E LF +M E G + D+
Sbjct: 667 LKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADS 726
Query: 506 TTYTSLLEGLCQETNLQAA 524
S++ L Q ++ A
Sbjct: 727 RMLNSIVRKLLQRGDITRA 745
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 171/379 (45%), Gaps = 36/379 (9%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++ +S G I+ A ++ D M +G+E + +G I C+ +L + + D++
Sbjct: 288 NTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV- 346
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E ++ +V +I G+C +E AF DE+ + P Y ++ + G +
Sbjct: 347 -EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRM 405
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E + ++K+ RK G+ P Y I G R AK+
Sbjct: 406 GEADDMIKEMRKKGIIPDAITYNILINGY---SRCGNAKK-------------------- 442
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
A N M+ KG PT T ++L L +RN+ E ++++ +
Sbjct: 443 -----------AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVS 491
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D+ +N MV C +G + A+ +++EM RK + PD +N+LM+ CRE + A+ L
Sbjct: 492 PDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARML 551
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
D+M G + +YN LIS + G+I+ A R+ ML G P TY +L++ LC+
Sbjct: 552 LDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCK 611
Query: 518 ETNLQAAFEVFNKSVNHDV 536
A E+ + VN +
Sbjct: 612 NQEGDLAEELLKEMVNKGI 630
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 141/323 (43%), Gaps = 36/323 (11%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++++ CK ++++A + + + KP+ ++Y + + G++ +L R
Sbjct: 254 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 313
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G+ P + Y I G+ E R+ EA L + +V + N LI G + D A
Sbjct: 314 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 373
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ + M++KG +P++ST YN++V
Sbjct: 374 FSYRDEMVKKGIMPSVST-----------------------------------YNLLVHA 398
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
L GR+ EA +I+EM++KG+ PD YN L+ R + A L ++M + G
Sbjct: 399 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT 458
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
TY LI S ++ A LF +L++GV+PD + ++++G C N++ AF +
Sbjct: 459 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLK 518
Query: 530 KSVNHDVMLARSILSTFMISLCR 552
+ V +T M CR
Sbjct: 519 EMDRKSVPPDEVTFNTLMQGRCR 541
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/449 (21%), Positives = 175/449 (38%), Gaps = 77/449 (17%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
+GF +PN +SY++I+ S I +L ++V I DS Y
Sbjct: 272 IGFMEGLGFKPNV----VSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY----- 322
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
SL++ + +G ++ A +FD+M G+
Sbjct: 323 ------------------------------GSLISGMCKEGRLEEASGLFDKMVEIGLVP 352
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
+ + + I +C L + S DE+ K+ ++ L++H R+ EA
Sbjct: 353 NAVTYNTLIDGYCNKGDLERAFSYRDEMVKK--GIMPSVSTYNLLVHALFMEGRMGEADD 410
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
++ E+R + PD I Y I+ + G+ + + + G+ P Y I L
Sbjct: 411 MIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLS 470
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
R+ EA +L E I+ + D + NA++ G ++ + A + M K P
Sbjct: 471 RRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEV 530
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T + L + C+ K +E + + D SYN ++S G +++A+ V EM
Sbjct: 531 TFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEM 590
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
G +P + YN+L++ C+ A++L +M
Sbjct: 591 LSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM------------------------- 625
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ KG++PD +TY SL+EG+
Sbjct: 626 ----------VNKGISPDDSTYLSLIEGM 644
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 126/266 (47%), Gaps = 22/266 (8%)
Query: 294 PRTNDYREFILGLIVERRICEAK---ELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
P D + + L +++ R+ K +L + ++ + + ++ + L S + +S+I
Sbjct: 121 PHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDELTLSRDRLSVKSSI 180
Query: 351 VF-------------------FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
VF F M EKG VP + T +++ K N+ + +Y +
Sbjct: 181 VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM 240
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+ + ++N+MV+ LC G+L++A I M+ G P+V YN+++ +
Sbjct: 241 FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNI 300
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A+++ D M G + TY LIS + G +E A LF M+E G+ P+A TY +L
Sbjct: 301 EGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL 360
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVM 537
++G C + +L+ AF ++ V +M
Sbjct: 361 IDGYCNKGDLERAFSYRDEMVKKGIM 386
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+ A F FM G P + + + + R + + + D +Y +
Sbjct: 266 KKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSL 325
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+S +C GRL EA G+ +M GL P+ YN+L++ C + L A D+M G
Sbjct: 326 ISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGI 385
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
++ TYN+L+ G + A + M +KG+ PDA TY L+ G + N + AF+
Sbjct: 386 MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFD 445
Query: 527 VFNKSVNHDVMLARSILSTFMISLCRR 553
+ N+ ++ + ++ + L RR
Sbjct: 446 LHNEMLSKGIEPTHVTYTSLIYVLSRR 472
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 136/299 (45%), Gaps = 13/299 (4%)
Query: 58 PYLLTHHSLALGFFNWASQQPNFTH-----------SPLSYHSILKSLSLSRQINAIDSV 106
P +T+++L G+ N + F++ S +Y+ ++ +L + ++ D +
Sbjct: 352 PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDM 411
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLAS 166
+K+++ I D+ Y +I + N +KAF + NE+ + SL+ VL+
Sbjct: 412 IKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSR 471
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
+ A +F+++ +GV I F + C N + + +L E+ ++ S+
Sbjct: 472 RNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRK--SVPPDE 529
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
V ++ G C+ +VEEA +LDE++ R KPD I+Y + + G + + V +
Sbjct: 530 VTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDE 589
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID 345
+G P Y I L + A+EL + +V+ + DD +LI + ++D
Sbjct: 590 MLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVD 648
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 179/398 (44%), Gaps = 7/398 (1%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKF-NCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
+ +I ++ + A VF ++ CE C +L+ L ID A+ + DEM
Sbjct: 202 FNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYC-TLMDGLCKADRIDEAVSLLDEM 260
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
G S + F V I C+ L + ++D + + I V +IHG C
Sbjct: 261 QIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLK--GCIPNEVTYNTLIHGLCLKG 318
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
++E+A +LD + +C P+ + Y + G + VL + G Y
Sbjct: 319 KLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYS 378
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK 359
I GL E + EA L + + + ++ V +A+I G P A+ + M K
Sbjct: 379 TLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNK 438
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P T S+L K + S VEV+K ++ +++ + Y+V++ LC G+++EA
Sbjct: 439 GCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEA 498
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG--CSGNLKTYNILI 477
V +M KG PDV Y+S++ L+ A +L+++M G ++ TYNIL+
Sbjct: 499 MMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILL 558
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ + I A+ L ++ML++G PD T T L L
Sbjct: 559 NTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRML 596
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/492 (22%), Positives = 215/492 (43%), Gaps = 56/492 (11%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+++S++ + + +++ VL ++K K + + I + + +KA +F+ +
Sbjct: 92 TFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDRM 151
Query: 146 --KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDE-MSHRGVEFS--TIGFGVFIWKFC 200
+F C+ G NS+L V+ +G AL+ ++ + +GV S + F + I C
Sbjct: 152 ACEFECKRTGKSF-NSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMC 210
Query: 201 ENAKLGQVLSMLDE--VRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
+ + + + + +RK E + ++ G CK R++EA +LDE++I C
Sbjct: 211 KVGLVDDAIQVFRDMTIRKCEPDVYT----YCTLMDGLCKADRIDEAVSLLDEMQIDGCF 266
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
P + + ++ G + ++ G P Y I GL ++ ++ +A L
Sbjct: 267 PSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISL 326
Query: 319 GEVIVSGKFTID----DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+ +VS K + ++N L+ ++D + M E+G S L
Sbjct: 327 LDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLAL---MEERGYCVNEYVYSTLISG 383
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
L K KS E + ++K ++ Y + Y+ ++ LC G+ +A V+ EM KG P+
Sbjct: 384 LFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPN 443
Query: 435 VSFYNSLM---------------------------EAC--------CREDLLRPAKKLWD 459
+SLM E C C++ ++ A +W
Sbjct: 444 AYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWT 503
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG--VAPDATTYTSLLEGLCQ 517
QM GC ++ Y+ +I+ S G +E A++L++ ML +G PD TY LL LC+
Sbjct: 504 QMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCK 563
Query: 518 ETNLQAAFEVFN 529
++++ A ++ N
Sbjct: 564 QSSISRAIDLLN 575
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F M + P + T L LCK ++ DE V + + + F ++NV+++
Sbjct: 218 AIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLIN 277
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G L A ++ M KG P+ YN+L+ C + L A L D+M +S C
Sbjct: 278 GLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVP 337
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ TY +I+ + G + M E+G + Y++L+ GL +E Q A +F
Sbjct: 338 NVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLF 397
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
+ L + S + LCR
Sbjct: 398 KEMTVKGYELNTIVYSAVIDGLCR 421
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 175/387 (45%), Gaps = 3/387 (0%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G +D K+ + M +G++ ++ +G I C KL + E+ ++ ++ +V
Sbjct: 738 GELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ--GILPDTV 795
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+ +I GFCK + A K E+ R+ PD + Y + F +G + E + +
Sbjct: 796 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 855
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDP 346
G+ P + + E I G + +A + ++ + + LI G D
Sbjct: 856 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 915
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
SA + M + G P + T +++ LCK +E V++ A D +Y +
Sbjct: 916 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 975
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ C SG + +A +++EM KGL P + +N LM C +L +KL + M A G
Sbjct: 976 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1035
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ N T+N L+ ++ ++ A ++ +M +GV PD TY +L++G C+ N++ A+
Sbjct: 1036 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 1095
Query: 527 VFNKSVNHDVMLARSILSTFMISLCRR 553
+F + ++ S S + +R
Sbjct: 1096 LFQEMKGKGFSVSVSTYSVLIKGFLKR 1122
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/488 (21%), Positives = 202/488 (41%), Gaps = 48/488 (9%)
Query: 62 THHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV 121
HH L L + +T +SY +++ +++ + +++ +K + +S +
Sbjct: 708 AHHLLLL------MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 761
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDE 179
Y II L + +A F+E+ + I P+ + +L+ G I A K F E
Sbjct: 762 YGSIIGLLCRICKLAEAEEAFSEMIR--QGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 819
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M R + + + I FC+ + + + E+ + + SV +I+G+CK
Sbjct: 820 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK--GLEPDSVTFTELINGYCKA 877
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+++AF+V + + C P+ + Y + + G + +L + K+G+ P Y
Sbjct: 878 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 937
Query: 300 REFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIE 358
+ GL I EA K +GE +G LNA
Sbjct: 938 NSIVNGLCKSGNIEEAVKLVGEFEAAG--------LNA---------------------- 967
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
T + L CK + D+ E+ K + + ++NV+++ C G L +
Sbjct: 968 -----DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 1022
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
++ M KG+ P+ + +NSL++ C + L+ A ++ M + G + KTY L+
Sbjct: 1023 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 1082
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+ ++ A LF M KG + +TY+ L++G + A EVF++ +
Sbjct: 1083 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA 1142
Query: 539 ARSILSTF 546
+ I F
Sbjct: 1143 DKEIFDFF 1150
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 99/194 (51%)
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
KG P + + S + C+ + D++ ++ +V+ + Y ++ LC +L E
Sbjct: 718 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 777
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A EM R+G+ PD Y +L++ C+ +R A K + +M + + ++ TY +IS
Sbjct: 778 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 837
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
F ++G++ A +LFH M KG+ PD+ T+T L+ G C+ +++ AF V N +
Sbjct: 838 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 897
Query: 539 ARSILSTFMISLCR 552
+T + LC+
Sbjct: 898 NVVTYTTLIDGLCK 911
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 117/245 (47%), Gaps = 4/245 (1%)
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS--ID 345
+ G PR D F L+ + EA+ + E +++ + D N + +S
Sbjct: 612 KDWGSDPRVFDV--FFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYK 669
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
+AI+ F E G +++ + + +C+ + E + ++ Y D+ SY+
Sbjct: 670 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 729
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+V+ C G L + + +I+ MKRKGL P+ Y S++ CR L A++ + +M G
Sbjct: 730 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 789
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+ Y LI F + G+I A + F+ M + + PD TYT+++ G CQ ++ A
Sbjct: 790 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 849
Query: 526 EVFNK 530
++F++
Sbjct: 850 KLFHE 854
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 347 RSAIVFFNFMIEKGRVPTLST----LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
R A F M+ G V ++ + L+ LSK+ K + + V++ ++ S
Sbjct: 635 REARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATA---IIVFREFPEVGVCWNVAS 691
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN+++ F+C GR++EA+ ++ M+ KG PDV Y++++ CR L KL + M
Sbjct: 692 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 751
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G N Y +I + ++ A F M+ +G+ PD YT+L++G C+ +++
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811
Query: 523 AA----FEVFNKSVNHDVMLARSILSTF 546
AA +E+ ++ + DV+ +I+S F
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGF 839
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 171/380 (45%), Gaps = 38/380 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++ +S G I+ A ++ D M +G+E + +G I C+ +L + + D++
Sbjct: 266 NTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV- 324
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E ++ +V +I G+C +E AF DE+ + P Y ++ + G +
Sbjct: 325 -EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRM 383
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E + ++K+ RK G+ P Y N L
Sbjct: 384 GEADDMIKEMRKKGIIPDAITY-----------------------------------NIL 408
Query: 338 IGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I S + + A N M+ KG PT T ++L L +RN+ E ++++ +
Sbjct: 409 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 468
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ +N MV C +G + A+ +++EM RK + PD +N+LM+ CRE + A+
Sbjct: 469 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 528
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L D+M G + +YN LIS + G+I+ A R+ ML G P TY +L++ LC
Sbjct: 529 LLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLC 588
Query: 517 QETNLQAAFEVFNKSVNHDV 536
+ A E+ + VN +
Sbjct: 589 KNQEGDLAEELLKEMVNKGI 608
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 141/323 (43%), Gaps = 36/323 (11%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++++ CK ++++A + + + KP+ ++Y + + G++ +L R
Sbjct: 232 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 291
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G+ P + Y I G+ E R+ EA L + +V + N LI G + D A
Sbjct: 292 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 351
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ + M++KG +P++ST YN++V
Sbjct: 352 FSYRDEMVKKGIMPSVST-----------------------------------YNLLVHA 376
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
L GR+ EA +I+EM++KG+ PD YN L+ R + A L ++M + G
Sbjct: 377 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT 436
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
TY LI S ++ A LF +L++GV+PD + ++++G C N++ AF +
Sbjct: 437 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLK 496
Query: 530 KSVNHDVMLARSILSTFMISLCR 552
+ V +T M CR
Sbjct: 497 EMDRKSVPPDEVTFNTLMQGRCR 519
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 167/417 (40%), Gaps = 42/417 (10%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
+GF +PN +SY++I+ S I +L ++V I DS Y
Sbjct: 250 IGFMEGLGFKPNV----VSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY----- 300
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
SL++ + +G ++ A +FD+M G+
Sbjct: 301 ------------------------------GSLISGMCKEGRLEEASGLFDKMVEIGLVP 330
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
+ + + I +C L + S DE+ K+ ++ L++H R+ EA
Sbjct: 331 NAVTYNTLIDGYCNKGDLERAFSYRDEMVKK--GIMPSVSTYNLLVHALFMEGRMGEADD 388
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
++ E+R + PD I Y I+ + G+ + + + G+ P Y I L
Sbjct: 389 MIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLS 448
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
R+ EA +L E I+ + D + NA++ G ++ + A + M K P
Sbjct: 449 RRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEV 508
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T + L + C+ K +E + + D SYN ++S G +++A+ V EM
Sbjct: 509 TFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEM 568
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
G +P + YN+L++ C+ A++L +M G S + TY LI V
Sbjct: 569 LSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 625
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 126/266 (47%), Gaps = 22/266 (8%)
Query: 294 PRTNDYREFILGLIVERRICEAK---ELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
P D + + L +++ R+ K +L + ++ + + ++ + L S + +S+I
Sbjct: 99 PHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDELTLSRDRLSVKSSI 158
Query: 351 VF-------------------FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
VF F M EKG VP + T +++ K N+ + +Y +
Sbjct: 159 VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM 218
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+ + ++N+MV+ LC G+L++A I M+ G P+V YN+++ +
Sbjct: 219 FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNI 278
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A+++ D M G + TY LIS + G +E A LF M+E G+ P+A TY +L
Sbjct: 279 EGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL 338
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVM 537
++G C + +L+ AF ++ V +M
Sbjct: 339 IDGYCNKGDLERAFSYRDEMVKKGIM 364
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+ A F FM G P + + + + R + + + D +Y +
Sbjct: 244 KKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSL 303
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+S +C GRL EA G+ +M GL P+ YN+L++ C + L A D+M G
Sbjct: 304 ISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGI 363
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
++ TYN+L+ G + A + M +KG+ PDA TY L+ G + N + AF+
Sbjct: 364 MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFD 423
Query: 527 VFNKSVNHDVMLARSILSTFMISLCRR 553
+ N+ ++ + ++ + L RR
Sbjct: 424 LHNEMLSKGIEPTHVTYTSLIYVLSRR 450
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 136/299 (45%), Gaps = 13/299 (4%)
Query: 58 PYLLTHHSLALGFFNWASQQPNFTH-----------SPLSYHSILKSLSLSRQINAIDSV 106
P +T+++L G+ N + F++ S +Y+ ++ +L + ++ D +
Sbjct: 330 PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDM 389
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLAS 166
+K+++ I D+ Y +I + N +KAF + NE+ + SL+ VL+
Sbjct: 390 IKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSR 449
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
+ A +F+++ +GV I F + C N + + +L E+ ++ S+
Sbjct: 450 RNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRK--SVPPDE 507
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
V ++ G C+ +VEEA +LDE++ R KPD I+Y + + G + + V +
Sbjct: 508 VTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDE 567
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID 345
+G P Y I L + A+EL + +V+ + DD +LI + ++D
Sbjct: 568 MLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVD 626
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 133/574 (23%), Positives = 225/574 (39%), Gaps = 50/574 (8%)
Query: 17 IISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQ 76
I++ R +P +W L D L + N LL+ L FF W
Sbjct: 64 IVATITREKP--RWEQTLVSDFPSFNFADPLFFRELVATQNNVLLS-----LRFFQWLCT 116
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+ T P+S + + ++L ++ + A V + DS+ + L +
Sbjct: 117 NHDCTPDPISSNMLFEALLDAKAVRAAKMVRD---IAGFIPDSASLEQYVKCLCGVGFIE 173
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV--EFSTIGFGV 194
+A V+ ++K I CNS+L+ G + + + EM G + +T G
Sbjct: 174 EAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGC 233
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
I FC++ ++ + +L++ K + G+ +I GFC+ K +VL +
Sbjct: 234 LIQAFCDSGQVARGYELLNQFLK--TGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIA 291
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
R P Y+ + E V + G AP Y I GL E
Sbjct: 292 RNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGE 351
Query: 315 AKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
A++L ++ + N ++ GS+ S D A +N M KG T T + +
Sbjct: 352 ARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIIS 411
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
LC R KSDE EV+K +S D +YN ++ C G++ E ++ E+ + P
Sbjct: 412 ELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQP 471
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY-------------------- 473
VS Y L+ C++ AK+L M + G N TY
Sbjct: 472 SVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELY 531
Query: 474 ---------------NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
N +IS+ G+ + A +F M E G+ DA TY SL+ G C+E
Sbjct: 532 NETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKE 591
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ + + N+ V + + S ++ +I LC+
Sbjct: 592 GKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQ 625
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 178/437 (40%), Gaps = 11/437 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+ ++ ++ ++ VL + Y+ II L + + +A+ VFN++
Sbjct: 265 TYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDL 324
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
K + +++ L G A K++ EM +G++ + + + ++
Sbjct: 325 KDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDF 384
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ + +E+ + +V II C + +EAF+V ++ + D I Y
Sbjct: 385 ERACELYNEMCNKGYGTT--TVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYN 442
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVS 324
+ F G V ER +L + P + Y I+ + AK L G++
Sbjct: 443 SLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSK 502
Query: 325 G----KFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
G +T D L GS+ S D +N KG T +T + + LC R K
Sbjct: 503 GLHPNAYTYD----TMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGK 558
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
SDE E++K +S D +YN ++ C G++ ++ ++ E+ +GL P S Y S
Sbjct: 559 SDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYAS 618
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L+ C+ AK+LW M + G + LIS + G + MLE
Sbjct: 619 LIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENK 678
Query: 501 VAPDATTYTSLLEGLCQ 517
+ P + L E L Q
Sbjct: 679 IKPKKAAFEDLAECLIQ 695
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 142/347 (40%), Gaps = 3/347 (0%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A ++F+++ RG + + I CE G+ + E+ + M + +
Sbjct: 317 AYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDK--GMQPNAYTYNTM 374
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
+HG K E A ++ +E+ + + + E G E V KK + G+
Sbjct: 375 LHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGI 434
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIV 351
Y I G E ++ E L +V+ + LI S D +A
Sbjct: 435 QADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKR 494
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
M KG P T + K + + E+Y Y T + N ++S LC
Sbjct: 495 LLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELC 554
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+ G+ EA + ++M G+ D YNSL+ C+E + + L +++ A G +
Sbjct: 555 SRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSAS 614
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+Y LI + + G+ E A RL+ +M+ KG+ P A L+ GLC++
Sbjct: 615 SYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQ 661
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 200/469 (42%), Gaps = 40/469 (8%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY+S+L +L S + + +S + ++ + Y +I + K KA + N +
Sbjct: 116 SYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWM 175
Query: 146 KFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ P++ +L+ LA +GY+ +ALK+FDEM RGV + + I F +
Sbjct: 176 WE--QGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKG 233
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ + + + K + N V+I +G CK + +E+F++ ++ E D
Sbjct: 234 DILNASEIWERLLKGPSVYPNIPSYNVMI-NGLCKCGKFDESFEIWHRMKKNERGQDLYT 292
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + G++ V K+ + GV+P Y + G + RI E EL +V+
Sbjct: 293 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM- 351
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
EK T+ + + L + L + K DE
Sbjct: 352 ----------------------------------EKEGCRTVVSYNILIRGLFENAKVDE 377
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ ++++L D D +Y V+V LC +G L +A +++E + D D Y+S++
Sbjct: 378 AISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMIN 437
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
CRE L + DQM GC N N +I+ F ++E ALR F NM+ KG P
Sbjct: 438 GLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFP 497
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
TY +L+ GL + A+ + + ++ S M LC+
Sbjct: 498 TVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQ 546
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 187/417 (44%), Gaps = 4/417 (0%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
Y +I L + ++F +++ +K N ++L+ L G +D A +++ EM+
Sbjct: 258 YNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMA 317
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
GV + + + + ++ + L + + K + V ++I G + +
Sbjct: 318 ENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTV---VSYNILIRGLFENAK 374
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
V+EA + + L ++C D + Y ++ G + + +L++ T Y
Sbjct: 375 VDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSS 434
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKG 360
I GL E R+ E + + + + V NA+I G V + A+ FF M+ KG
Sbjct: 435 MINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKG 494
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
PT+ T + L L K + E + K + + +M +Y+++++ LC +L A
Sbjct: 495 CFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMAL 554
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+ + KG PDV +N ++ C + A +L+ +M C NL T+N L+ F
Sbjct: 555 NLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGF 614
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+V + E A +++ ++L+ G PD +Y L+GLC + A N +V+ V+
Sbjct: 615 YKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVL 671
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/481 (22%), Positives = 212/481 (44%), Gaps = 28/481 (5%)
Query: 54 RVINPYLLTHHSLALGFFN----------WAS--QQPNFTHSPLSYHSILKSLSLSRQIN 101
R + P + ++ L GFF W + P+ + SY+ ++ L + +
Sbjct: 213 RGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFD 272
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NS 159
+ ++K N+ D Y +I L N A V+ E+ N + P++ N+
Sbjct: 273 ESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAEN--GVSPDVVVYNT 330
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
+L G I+ L+++ M G + + + + I ENAK+ + +S+ + + +++
Sbjct: 331 MLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKD 389
Query: 220 ---NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+SM G +++HG CK + +A +L+E D AY + G
Sbjct: 390 CCADSMTYG-----VLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGR 444
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLN 335
+ E VL + K G P + I G + ++ +A + G ++ G F N
Sbjct: 445 LDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVV-TYN 503
Query: 336 ALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
LI +S + S A M+ KG P + T S L LC+ K D + ++
Sbjct: 504 TLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK 563
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ D++ +N+++ LC+SG++ +A + EMK++ P++ +N+LME + A
Sbjct: 564 GFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERA 623
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K+WD + G ++ +YNI + I A+ ++ +++GV P A T+ L+
Sbjct: 624 SKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRA 683
Query: 515 L 515
+
Sbjct: 684 V 684
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 112/235 (47%), Gaps = 3/235 (1%)
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEK-GRVPTLSTLSNLSKNLCK 377
E+I + K +DV +I + + P A+ F M E G P + + ++L L +
Sbjct: 67 ELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIE 126
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
NK DE + ++++YN+++ C + +A ++ M +G PDV
Sbjct: 127 SNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFS 186
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
Y +L+ + + + A KL+D+M G + ++ YNILI F + G+I A ++ +L
Sbjct: 187 YGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLL 246
Query: 498 E-KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+ V P+ +Y ++ GLC+ +FE++++ ++ ST + LC
Sbjct: 247 KGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 301
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 198/438 (45%), Gaps = 5/438 (1%)
Query: 117 LDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKM 176
+D+ V+ +I S +Q + + F ++ + CNSLL L G++D A ++
Sbjct: 113 VDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEV 172
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
++E++ G+E + + + C++ K+ V L ++ ++ + V +I+ +
Sbjct: 173 YNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQK--GIFADIVTYNTLINAY 230
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
C+ + EAF+V++ + + KP Y V G + V + +G++P T
Sbjct: 231 CREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDT 290
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFN 354
Y ++ EAK++ ++ + D ++LIG VSS + A+++F
Sbjct: 291 TTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIG-VSSRNGHLDQALMYFR 349
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M G VP + L C+ E +E+ + D+ +YN +++ LC
Sbjct: 350 DMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKK 409
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
L +A + EM +G+ PD + +L+ C+E + A L+ M ++ TYN
Sbjct: 410 LLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYN 469
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
ILI F + E+E A L++ M+ + + P+ +Y L+ G C + AF ++++ +
Sbjct: 470 ILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRK 529
Query: 535 DVMLARSILSTFMISLCR 552
+ +T + CR
Sbjct: 530 GIKPTLVTCNTVIKGYCR 547
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 179/426 (42%), Gaps = 36/426 (8%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
Y +I L + +A VFNE+ N+LL + A +F +M
Sbjct: 258 YNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDML 317
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
HRGV I F I N L Q L +++ + ++ +VI ++I+G+C+
Sbjct: 318 HRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKT--SGLVPDNVIYTILINGYCRNGM 375
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+ EA ++ D++ + C D +AY + + + + + + GV P +
Sbjct: 376 MSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTT 435
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGR 361
I G C+ +G+ A+ F M +K
Sbjct: 436 LIHGH------CKEGNMGK----------------------------ALSLFGIMTQKNI 461
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P + T + L CK + ++ E++ + + F + SY ++V+ C G + EA+
Sbjct: 462 KPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFR 521
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+ EM RKG+ P + N++++ CR L A + +M + G + TYN LI+ F
Sbjct: 522 LWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFV 581
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
+ ++ A L + M KG+ PD TY +L G C++ +Q A + K + + RS
Sbjct: 582 KGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRS 641
Query: 542 ILSTFM 547
+T +
Sbjct: 642 TYTTLI 647
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/511 (19%), Positives = 207/511 (40%), Gaps = 50/511 (9%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
L + +++S +R++N K ++ + + ++ L++ A+ V+NE
Sbjct: 116 LVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNE 175
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + ++ N ++ L D ID+ +M +G+ + + I +C
Sbjct: 176 IARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGL 235
Query: 205 LGQVLSMLDEVRKRE--------NSMING--------------------------SVIAV 230
LG+ +++ + + N++ING +
Sbjct: 236 LGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNT 295
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
L++ C+ EA + ++ R PD I++ + G + + + + +
Sbjct: 296 LLVES-CRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTS 354
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID----DDVLNALIGSVSSIDP 346
G+ P Y I G + EA E+ + ++ +D + +LN L D
Sbjct: 355 GLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLAD- 413
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A F+ M+E+G VP T + L CK + + ++ +++ + D+ +YN++
Sbjct: 414 --ANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNIL 471
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ C + + +A + EM + + P+ Y L+ C + A +LWD+M G
Sbjct: 472 IDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGI 531
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
L T N +I + G++ A M+ +GV PD+ TY +L+ G + + AF
Sbjct: 532 KPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFF 591
Query: 527 VFN----KSVNHDVMLARSILSTFMISLCRR 553
+ N K + DV+ IL+ F CR+
Sbjct: 592 LINKMETKGLQPDVVTYNVILNGF----CRQ 618
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 192/424 (45%), Gaps = 9/424 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y++++ L + V ++ ++ D++ Y ++ + N +A +F++
Sbjct: 256 FTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSD 315
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ + P++ + SL+ V + +G++D AL F +M G+ + + + I +C N
Sbjct: 316 MLH--RGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRN 373
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ + L + D++ ++ ++ V+A I++G CK K + +A + DE+ R PDF
Sbjct: 374 GMMSEALEIRDKMLEQGCAL---DVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDF 430
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ + G++ + + + + P Y I G + +A EL
Sbjct: 431 CTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNE 490
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
++S K + L+ ++ S A ++ MI KG PTL T + + K C+
Sbjct: 491 MISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGD 550
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+ E + + D +YN +++ + +A+ +I +M+ KGL PDV YN
Sbjct: 551 LSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNV 610
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
++ CR+ ++ A+ + +M G + TY LI+ + ++ A R ML++G
Sbjct: 611 ILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRG 670
Query: 501 VAPD 504
PD
Sbjct: 671 FVPD 674
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M +KG + T + L C+ E EV +S + +YN +++ LC GR
Sbjct: 211 MEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGR 270
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
A GV EM GL PD + YN+L+ CR + AK ++ M G S +L +++
Sbjct: 271 YVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSS 330
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI S G ++ AL F +M G+ PD YT L+ G C+ + A E+ +K +
Sbjct: 331 LIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQG 390
Query: 536 VMLARSILSTFMISLCRRVLI 556
L +T + LC++ L+
Sbjct: 391 CALDVVAYNTILNGLCKKKLL 411
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 104/220 (47%), Gaps = 6/220 (2%)
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAV--LASDGYIDN 172
I D Y +I + +KA ++NE+ I P + + V + G++
Sbjct: 461 IKPDIVTYNILIDGFCKTTEMEKANELWNEMI--SRKIFPNHISYAILVNGYCNLGFVSE 518
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A +++DEM +G++ + + I +C + L + L ++ + S+ +
Sbjct: 519 AFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISE--GVGPDSITYNTL 576
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I+GF KG+ +++AF +++++ + +PD + Y ++ F G + E E++L+K + G+
Sbjct: 577 INGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGI 636
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
P + Y I G + + + EA + ++ F DDD
Sbjct: 637 DPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDDD 676
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/478 (23%), Positives = 207/478 (43%), Gaps = 29/478 (6%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y++++ L ++ + VL++++ + D Y +I + + +KAF + +
Sbjct: 362 YNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMV 421
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
N N+LL S ID+AL+++ M RGV + I + + K
Sbjct: 422 RNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTE 481
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
Q L++ E R + + +I+G CK R+ EA ++LD ++ C PD + YR
Sbjct: 482 QALNLWKETLAR--GLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRT 539
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ + + +G + ++ K LG AP + FI G + ++ + ++ + +
Sbjct: 540 LFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARG 599
Query: 327 FTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE-- 383
+ + ALI G + A + M+ G P + S L K K DE
Sbjct: 600 LSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEAN 659
Query: 384 ------------------LVEVYKVLSANDYFTDMES------YNVMVSFLCTSGRLREA 419
+E+ K+ D D +NV++ LC SGR+ +A
Sbjct: 660 LVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADA 719
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ + ++ K PD Y+SL+ C + A L D M ++G + N+ TYN LI
Sbjct: 720 KSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYG 779
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ G++ A+ LF+ + KG++P+ TY +L++ C+E AF++ K V M
Sbjct: 780 LCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYM 837
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 180/396 (45%), Gaps = 41/396 (10%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL A G + +AL +FD M G S + K ++ G + ++R
Sbjct: 154 LLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIA- 212
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
++ ++ +C+ RV +A + ++E+ + + +AY V + + MG +
Sbjct: 213 -GVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTED 271
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALI 338
+L+ ++ G++P Y + G + R+ EA+ + E+ +G +D+
Sbjct: 272 ARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDE------- 324
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
V + MI C+R + D+ V +
Sbjct: 325 ------------VAYGMMI---------------NGYCQRGRMDDATRVRNEMRDAGIHV 357
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
++ YN M++ LC GR+ E V+QEM+ G+ PD YN+L++ CRE +R A ++
Sbjct: 358 NLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMC 417
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
M +G + TYN L+ F + I+ ALRL+ ML++GVAP+ + ++LL+GL +
Sbjct: 418 RMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKA 477
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILS--TFMISLCR 552
+ A ++ +++ LA+++++ T + LC+
Sbjct: 478 GKTEQALNLWKETLARG--LAKNVITFNTVINGLCK 511
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 184/461 (39%), Gaps = 93/461 (20%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
C++LL L G + AL ++ E RG+ + I F I C+ ++ + +LD R
Sbjct: 467 CSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLD--R 524
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD------FIAYRIVAEE 270
+E S+ + G+CK ++ A +++++ P FI +A++
Sbjct: 525 MKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQ 584
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS------ 324
+ + + + G++P Y I G E + EA L +V+
Sbjct: 585 WHKVNDIHS------EMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPN 638
Query: 325 --------------GKF----------------------TIDDDVLNALIGSVSSIDPRS 348
GK TI+ D ++ ++ +++ +P S
Sbjct: 639 VFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHS 698
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A V +N +I LCK + + +++ L + D +Y+ ++
Sbjct: 699 ANVMWNVII---------------FGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIH 743
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
SG + EA+ + M GL P++ YNSL+ C+ L A L++++ + G S
Sbjct: 744 GCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISP 803
Query: 469 NLKTYNILISKFS----------------EVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
N TYN LI ++ E G +E A++L M+E V P+ TY +L+
Sbjct: 804 NGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLI 863
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
G + N++ +++ D M R +L T I +R
Sbjct: 864 HGYIKSGNMEEISKLY------DEMHIRGLLPTNWIGNWKR 898
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 136/549 (24%), Positives = 229/549 (41%), Gaps = 70/549 (12%)
Query: 47 LSPSLVARVINP-YLLTHHSLALGFFNWASQQ-PNFTHSP-----------LSYHSILKS 93
L+P LV +++ L++ ++ + FF WA P F H+ S+ +
Sbjct: 48 LTPPLVLSILSSKTLISRPNILISFFKWAQTNLPTFPHNSLPSLLSLLPSLFSHRKFSDA 107
Query: 94 LSLSRQINAID-------SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
SL A D S+L+ +K LD++ I + +Q AF +F ++K
Sbjct: 108 KSLLLGFIATDRRHDLHLSILRLTSPSKALLDTA-----IGAYVQSGQPHHAFQIFKKMK 162
Query: 147 FNCEDIGPEI--CNSLLAVLA---SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ P + CN+LL L S + + + F++ G+ + F + I+ +C
Sbjct: 163 R--LRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCL 220
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
K + L+ + K S N V I+ CK R+ +A +L +++ R P+
Sbjct: 221 ENKFKDAVEFLNVMGKYNCSPDN--VTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNR 278
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
Y I+ + MG + E V++ + + P Y I GL E RI EA +L +
Sbjct: 279 NTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDE 338
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ + K D N LI G + A M EKG P T + + K CK K
Sbjct: 339 MENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGK 398
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
D+ + + + D +YN +++ C +G + EA+ + EM RK + D N+
Sbjct: 399 MDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNT 458
Query: 441 LMEACCREDLLRPAKKL-----------------------------------WDQMFASG 465
++ CRE L A KL WD+M
Sbjct: 459 ILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKE 518
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+ TYN +I + G+ E A+ + +LE G+ PD TTY ++L G C+E +++ AF
Sbjct: 519 IIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAF 578
Query: 526 EVFNKSVNH 534
+ NK V +
Sbjct: 579 QFHNKMVEN 587
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/475 (21%), Positives = 197/475 (41%), Gaps = 30/475 (6%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLA 162
+V++ + N + D Y +I L ++AF + +E++ N + + P++ N+L+
Sbjct: 299 NVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME-NLK-LLPDVVSYNTLIN 356
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
I A K+ +EMS +GV+ + + + + +C+ K+ + + + E+
Sbjct: 357 GCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTI--TKMEESGF 414
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
V +I+G+CK + EAF+ +DE+ + K D + + + E
Sbjct: 415 SPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYK 474
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+L RK G Y I+G + + A +L + + + N +IG +
Sbjct: 475 LLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLC 534
Query: 343 SI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
AI N ++E G +P +T + + C+ ++ + + + N + D+
Sbjct: 535 QCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVF 594
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+ N+++ LC G L +A + KG D YN+L+ + C+E L A L +M
Sbjct: 595 TCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEM 654
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD----------------- 504
+ TYN +I+ ++ G I A MLEKG PD
Sbjct: 655 EEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETS 714
Query: 505 ------ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ Y+ ++ LC E + A +F +S + + +S M L +R
Sbjct: 715 EESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKR 769
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/455 (20%), Positives = 203/455 (44%), Gaps = 7/455 (1%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N + ++Y++IL +L ++ +L +K + + + Y ++ + ++A
Sbjct: 238 NCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEA 297
Query: 139 FSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+V + N ++ P++ N L+ L ++G I+ A K+ DEM + + + + I
Sbjct: 298 ANVIELMTQN--NLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLI 355
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
E +K+ + +L+E+ E + +V +++ +CK ++++A + ++
Sbjct: 356 NGCLEWSKISEAFKLLEEMS--EKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
PD + Y + + G++ E + + + + + + L E+++ EA
Sbjct: 414 FSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAY 473
Query: 317 ELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+L + ID+ LI G + A+ ++ M EK +P+ T + + L
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGL 533
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C+ K+++ + L + D +YN ++ C G + +A+ +M PDV
Sbjct: 534 CQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDV 593
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
N L+ C E +L A KL++ + G + + TYN LI+ + G ++ A L
Sbjct: 594 FTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSE 653
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
M EK + PD TY +++ L ++ A E +K
Sbjct: 654 MEEKELGPDHYTYNAIITALTDSGRIREAEEFMSK 688
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 196/453 (43%), Gaps = 7/453 (1%)
Query: 82 HSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
H P + + IL SL + + S+ KQ++ I D +I +F
Sbjct: 6 HIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSF 65
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
SV ++ I N+L+ L G + +L D++ +G + + +G+ +
Sbjct: 66 SVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGL 125
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECK 258
C K+G+ + +R E+ V+ II G CK K V+EA+ + E+ R
Sbjct: 126 C---KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIF 182
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD I Y + F L G + E +L + + P Y I L E ++ E+K L
Sbjct: 183 PDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNL 242
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
V+ D + + L+ + + + A F M++ G P + + + + LCK
Sbjct: 243 LAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCK 302
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ DE + + + + + D +Y+ ++ LC GR+ + +EM +G ++
Sbjct: 303 GKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVT 362
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
YNSL++ C+ L A L+ +M G N TY LI + G ++ LF ++L
Sbjct: 363 YNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLL 422
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
KG D TYT ++ GLC+E A + +K
Sbjct: 423 VKGYCIDVWTYTVMISGLCKEGMFDEALAMKSK 455
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 155/322 (48%), Gaps = 1/322 (0%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I+ K K + ++ + PD + I+ F +G + VL K KLG
Sbjct: 16 ILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLG 75
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAI 350
P T + GL ++ + ++ + +V+ F +D L+ + I + R AI
Sbjct: 76 YQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAI 135
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ ++ P + S + LCK DE ++Y ++A F D+ +Y ++
Sbjct: 136 KLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGF 195
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C +G+L EA+G++ EM K ++P++ YN+L++ C+E ++ +K L M G ++
Sbjct: 196 CLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDV 255
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
Y+IL+ + VGE++ A ++F M++ GV PD +Y ++ GLC+ + A + +
Sbjct: 256 VIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLRE 315
Query: 531 SVNHDVMLARSILSTFMISLCR 552
++ +++ S+ + LC+
Sbjct: 316 MLHKNMIPDTVTYSSLIDGLCK 337
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/193 (18%), Positives = 99/193 (51%), Gaps = 4/193 (2%)
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
+P + + +L K ++ + K + A D+ + +++++ C G++ ++
Sbjct: 6 HIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSF 65
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
V+ ++ + G P+ N+LM+ C + ++ + D++ A G + +Y IL++
Sbjct: 66 SVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGL 125
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN----KSVNHDV 536
++GE A++L + ++ PD Y+++++GLC++ + A+++++ + + DV
Sbjct: 126 CKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDV 185
Query: 537 MLARSILSTFMIS 549
+ +++ F ++
Sbjct: 186 ITYTTLICGFCLA 198
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 82/188 (43%), Gaps = 14/188 (7%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY+ I+ L ++++ ++L+++ + D+ Y +I L + + E+
Sbjct: 292 SYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEM 351
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ NSLL L + +D A+ +F +M RG++ + + I C+ +L
Sbjct: 352 HHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRL 411
Query: 206 --GQVLSMLDEVRKRENSMINGSVIAV----LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
GQ L ++ ++ G I V ++I G CK +EA + ++ C P
Sbjct: 412 KKGQALF--------QHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIP 463
Query: 260 DFIAYRIV 267
+ + + I+
Sbjct: 464 NAVTFEII 471
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 120/536 (22%), Positives = 226/536 (42%), Gaps = 78/536 (14%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
LA +F + F H+ L+Y +++ L ++ + +L+Q+K+ I+ ++ +
Sbjct: 61 LASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINV 120
Query: 126 IPSLIQGKNTQKAFSVFNEVK-FNCEDI------------------------------GP 154
I + + ++A +F ++ F C+ G
Sbjct: 121 INTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGK 180
Query: 155 E----ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS 210
E N LL L + +D A K+ EMS++G E + + I +KLG+V
Sbjct: 181 EPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSM---SKLGKV-- 235
Query: 211 MLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
+E R+ + +I+GFC+ +V+E F +L ++ + P+ I Y V
Sbjct: 236 --EEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISS 293
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA--------------- 315
+G+V V K G +P + + G + R+ EA
Sbjct: 294 LSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPN 353
Query: 316 --------------KELGEVI-VSGKF-----TIDDDVLNALI-GSVSSIDPRSAIVFFN 354
++GE + VS K + + ALI G + D A +N
Sbjct: 354 VVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWN 413
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+ G +P + +++ LC+ + + + + +S ++ + ++N + LC SG
Sbjct: 414 KMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSG 473
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
R+ A + +M++ G P++ YN +++ +E+ ++ A +L +M G NL TYN
Sbjct: 474 RVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYN 533
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ F VG+ E AL+L ML GV PDA TY +L C + ++ A ++ +K
Sbjct: 534 TIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDK 589
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 179/435 (41%), Gaps = 26/435 (5%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN + Y++++ ++ + +L Q+ I + Y +I SL N +
Sbjct: 246 QPNVS----VYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVE 301
Query: 137 KAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
A +V+ K P + SL+ G + AL +++ M+ G E + + +
Sbjct: 302 LALAVW--AKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNT 359
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
I C + K+G+ +S+ ++ +R N S LI GF K + A ++ +++
Sbjct: 360 LIHGLCSHGKMGEAVSVSSKM-ERNGCSPNVSTYGALI-DGFAKAGDLVGASEIWNKMMT 417
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI-- 312
C P+ + Y + + +++K P T + FI GL R+
Sbjct: 418 NGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVEC 477
Query: 313 -----CEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
C+ ++ G S ++VL+ L+ + A+ M EKG L T
Sbjct: 478 AINLFCQMEQYG---CSPNIKTYNEVLDGLL---KENRIKEALELVTEMEEKGMELNLVT 531
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ + C K +E +++ + D +YN + C G+++ A ++ ++
Sbjct: 532 YNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLS 591
Query: 428 RKG-LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK-FSEVGE 485
G P+V+ Y SL+ C + + A D+M G N T+N L+ F+ +G
Sbjct: 592 AGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGH 651
Query: 486 IEGALRLFHNMLEKG 500
+ G + + ++L G
Sbjct: 652 L-GPIHILDDILTSG 665
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 402 SYNVMVSFLCTSGRLREAYGV---IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+Y +M+ L GR + GV +Q+MK +G+ + +++ R L A K++
Sbjct: 81 TYQIMIEKL---GRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMF 137
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
++ GC +K YN L+ + ++ NM G P+ TY LL+ LC+
Sbjct: 138 YRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKN 197
Query: 519 TNLQAA----FEVFNKSVNHDVMLARSILSTF 546
+ A E+ NK DV+ +++S+
Sbjct: 198 NRVDGACKLLVEMSNKGCEPDVVSYTTVISSM 229
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 204/466 (43%), Gaps = 6/466 (1%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A+ FN +Q N T + + IL SL S+ + + S+ ++++ I + + +I
Sbjct: 54 AVSLFNCLLRQ-NPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILI 112
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVE 186
Q AFSV ++ + N+ + G I AL D++ G
Sbjct: 113 NCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFH 172
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEA 245
+ +G I C K+G+ + L+ +R+ + ++ V+ II CK K V +A
Sbjct: 173 LDQVSYGTLINGLC---KVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDA 229
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
F + E+ R + + Y + F ++G + + + K + P + +
Sbjct: 230 FDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDA 289
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPT 364
E R+ EAK +++ D N+L+ ++ + A N M +G T
Sbjct: 290 FCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTAT 349
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
+ + + + CK D+ ++++K + F ++ +YN ++ LC SGR+ A +I
Sbjct: 350 VRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELID 409
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
M +G PD+ Y+S+++A C+ L+ A L ++ G N+ TY ILI + G
Sbjct: 410 LMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGG 469
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+E A +F ++L KG TYT +++G C A + +K
Sbjct: 470 RLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSK 515
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 161/365 (44%), Gaps = 44/365 (12%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I+ K K + ++ R KP+F+ + I+ F +G + VL K K+G
Sbjct: 76 ILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMG 135
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI------- 344
P T FI G ++ +I +A + +V+ F +D LI + +
Sbjct: 136 YEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAAL 195
Query: 345 -----------------------------DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ A ++ M+ + + T S L
Sbjct: 196 ELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGF 255
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C K + + ++ +++ + D+ ++N++V C GR++EA + M ++G+ PD+
Sbjct: 256 CIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDI 315
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YNSLM+ C + + AK + + M G + +++YNI+I+ F ++ ++ A++LF
Sbjct: 316 VTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKE 375
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSILSTFMISLC 551
M K + P+ TY SL++GLC+ + A E+ ++ D++ SIL +LC
Sbjct: 376 MHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILD----ALC 431
Query: 552 RRVLI 556
+ L+
Sbjct: 432 KNHLV 436
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 187/428 (43%), Gaps = 5/428 (1%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++ ++ +K L QI+ + ++ LD Y +I L + T+ A +
Sbjct: 141 ITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRR 200
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
V + + ++++ + D +++A ++ EM R + + + + I FC K
Sbjct: 201 VDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGK 260
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
L + + +++ EN IN V +++ FCK RV+EA L + + KPD +
Sbjct: 261 LKDAIGLFNKMTS-EN--INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVT 317
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + + L+ V + +L GV Y I G + + +A +L + +
Sbjct: 318 YNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMH 377
Query: 324 SGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+ + N+LI G S A+ + M ++G+ P + T S++ LCK + D
Sbjct: 378 HKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVD 437
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
+ + + L +M +Y +++ LC GRL +A + +++ KG + V+ Y ++
Sbjct: 438 KAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMI 497
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+ C L A L +M + C + TY I+I + E + A +L M+ +G+
Sbjct: 498 QGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLL 557
Query: 503 PDATTYTS 510
Y S
Sbjct: 558 YSFLEYGS 565
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
D A+ FN ++ + P + +L K ++ +++ + + ++N
Sbjct: 50 DVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFN 109
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
++++ C G + A+ V+ ++ + G +PD N+ ++ C + + A D++ A
Sbjct: 110 ILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVAL 169
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G + +Y LI+ +VGE AL L + K V D Y+++++ +C++ N+ A
Sbjct: 170 GFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDA 229
Query: 525 FEVFNKSVNH----DVMLARSILSTFMI 548
F+++++ V+ +++ +++S F I
Sbjct: 230 FDLYSEMVSRRISSNIVTYSALISGFCI 257
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 162/391 (41%), Gaps = 53/391 (13%)
Query: 150 EDIGPEIC--NSLLAVLASDGY-----IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ I P+I NSL+ DGY ++ A + + MSHRGV + + + I FC+
Sbjct: 309 QGIKPDIVTYNSLM-----DGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKI 363
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ Q + + E+ ++ I +VI +I G CK R+ A +++D + R +PD
Sbjct: 364 KMVDQAMKLFKEMHHKQ---IFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDI 420
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
I Y + + V + +L K + G+ P Y I GL R+ +A+ + E
Sbjct: 421 ITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFED 480
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
++ + + + +I G S A+ + M + +P T + +L +++
Sbjct: 481 LLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDE 540
Query: 381 SDELVEVYK-VLSANDYFTDMESYNVMVSFL-------------CTSGR---------LR 417
+D+ ++ + +++ ++ +E + +SF+ CTS + L
Sbjct: 541 NDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLE 600
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
Y K D DV + ++ + C W + G ++ TY ++I
Sbjct: 601 RIYCDCVLTKSNMRDKDVECPSVIIYSTCD----------WSK---QGYILDVNTYTVMI 647
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
F G + +L L M G PDA TY
Sbjct: 648 QGFCSHGLFDESLALLSKMEVNGCIPDAVTY 678
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 202/455 (44%), Gaps = 7/455 (1%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S + ++ IL S+ + S+ KQ+ + IT +I + AFSV
Sbjct: 77 SVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVL 136
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
V + +++ L +G + AL+ D + +G + +G I C
Sbjct: 137 GMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLC-- 194
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
K+G + + K E ++ +V+ +I+ G CK V EA + ++ R PD
Sbjct: 195 -KIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDV 253
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
Y + F +G E +L V Y I L + + +A ++ +
Sbjct: 254 FTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNL 313
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
++ D N L+ G D A F+ E G P + + + L CK N+
Sbjct: 314 MIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNR 373
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
DE + ++ ++ ++ +Y+ ++ LC SGR+ A+ + + G P+V YN
Sbjct: 374 IDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNI 433
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+++A C+ L+ A +L++ MF G + N+ +YNILI+ + + I+ A+ LF M +
Sbjct: 434 MLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRN 493
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
+ PD+ TY L++GLC+ + A+E+FN V HD
Sbjct: 494 LVPDSVTYNCLIDGLCKSGRISHAWELFN--VMHD 526
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 203/452 (44%), Gaps = 10/452 (2%)
Query: 40 QLGLRDSLSPSLV--ARVINPYL-LTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSL 96
Q+GLR ++PS+V + +IN Y L H A ++ + + ++ +I+K L +
Sbjct: 103 QMGLR-GITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKR-GYQLNAITLTTIMKGLCI 160
Query: 97 SRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI 156
+ ++ V LD Y +I L + T++AF + ++++ I
Sbjct: 161 NGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVI 220
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
N ++ L DG + A ++ ++ RG++ + I FC + +V +L ++
Sbjct: 221 YNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMV 280
Query: 217 KRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
R +N +V ++I CK + +A + + + R +PD + + + + L
Sbjct: 281 DRN---VNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYN 337
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
V E + + G+ P Y I+G RI EA L + K + +
Sbjct: 338 DVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYS 397
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+LI G S A F+ + + G P + T + + LCK D+ +E++ ++
Sbjct: 398 SLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFER 457
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ SYN++++ C S R+ EA + +EM R+ L PD YN L++ C+ + A
Sbjct: 458 GLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHA 517
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
+L++ M G ++ TYNIL FS++ +
Sbjct: 518 WELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 106/253 (41%), Gaps = 22/253 (8%)
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIE--------------------KGRVP 363
SG IDD V AL + ++ P ++V FN ++ +G P
Sbjct: 54 SGFDAIDDAV--ALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITP 111
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
++ TLS L C V ++ Y + + ++ LC +G +R+A
Sbjct: 112 SIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFH 171
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+ +G D Y +L+ C+ L R A +L +M N+ YN+++ +
Sbjct: 172 DSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKD 231
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
G + A L+ +++ +G+ PD TYT L+ G C + + V+ +V L
Sbjct: 232 GLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTY 291
Query: 544 STFMISLCRRVLI 556
+ + +LC++ ++
Sbjct: 292 NILIDALCKKGML 304
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 159/322 (49%), Gaps = 1/322 (0%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I+ K K A + +++++ +PD I+ F +G + VL K KLG
Sbjct: 16 IVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLG 75
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAI 350
P T + GL ++ + ++ + +V+ F +D L+ + I + RSA+
Sbjct: 76 YQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSAL 135
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ ++ P + + + LCK +E ++Y + A F ++ +Y+ ++
Sbjct: 136 KLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGF 195
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C +G+L EA+G++ EM K ++P+V Y LM+A C+E ++ AK L M G N+
Sbjct: 196 CLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNV 255
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+YN L+ + +GE++ A ++FH M++KGV P+ +Y +++ LC+ + A + +
Sbjct: 256 VSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLRE 315
Query: 531 SVNHDVMLARSILSTFMISLCR 552
++ +++ S+ + C+
Sbjct: 316 VLHKNMVPNTVTYSSLIDGFCK 337
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 197/448 (43%), Gaps = 5/448 (1%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+ ++ I+ SL + S+ KQ++V I D +I +F+V +
Sbjct: 11 MEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGK 70
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ N+L+ L G + +L D++ +G + + + + C K
Sbjct: 71 ILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC---K 127
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+G+ S L +R E+ +V+ II G CK K V EA+ + E+ R P+ I
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + F L G + E +L + + P Y + L E ++ EAK L V+
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247
Query: 324 SGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+ N L+ I + ++A F+ M++KG P + + + + LCK + D
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E + + + + + + +Y+ ++ C GR+ A +++EM +G DV Y SL+
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+A C+ L A L+ +M G N TY LI + G + A +LF ++L KG
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCR 427
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ TY ++ GLC+E L A + +K
Sbjct: 428 INVWTYNVMISGLCKEGMLDEALAMKSK 455
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/477 (21%), Positives = 208/477 (43%), Gaps = 48/477 (10%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
L LG+ QPN ++ ++++K L L ++ +V +D Y +
Sbjct: 72 LKLGY------QPN----TITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATL 121
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
+ L + T+ A + ++ + N+++ L D ++ A ++ EM RG+
Sbjct: 122 LNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGI 181
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGFCKGKRVEE 244
+ I + I+ FC +L + +L+E+ + IN +V +++ CK +V+E
Sbjct: 182 FPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKN---INPNVYTYTILMDALCKEGKVKE 238
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A +L + KP+ ++Y + + + L+G V + + + GV P Y
Sbjct: 239 AKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYN---- 294
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT 364
I+ R+C++K + E A+ ++ K VP
Sbjct: 295 --IMIDRLCKSKRVDE----------------------------AMNLLREVLHKNMVPN 324
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
T S+L CK + +++ K + D+ +Y ++ LC + L +A +
Sbjct: 325 TVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFM 384
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
+MK +G+ P+ Y +L++ C+ + A+KL+ + GC N+ TYN++IS + G
Sbjct: 385 KMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEG 444
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
++ AL + M E G PDA T+ ++ L ++ A ++ ++ + D++ R
Sbjct: 445 MLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLLRFRD 501
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + + + +L K + ++K + D+ + N++++ C G++ ++ V
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ ++ + G P+ N+LM+ C + ++ + D++ A G + +Y L++ +
Sbjct: 68 LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
+GE AL+L + ++ P+ Y ++++GLC++ + A++++++ M AR I
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSE------MDARGI 181
Query: 543 L------STFMISLC 551
ST + C
Sbjct: 182 FPNVITYSTLIYGFC 196
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 58/120 (48%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P + +N ++ + + A L+ QM G +L T NILI+ F +G++ + +
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+L+ G P+ T +L++GLC + ++ + +K V + + +T + LC+
Sbjct: 68 LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+N +V L A + ++M+ KG++PD+ N L+ C + + + ++
Sbjct: 13 FNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKIL 72
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G N T N L+ GE++ +L ++ +G D +Y +LL GLC+ +
Sbjct: 73 KLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETR 132
Query: 523 AAFEVF----NKSVNHDVMLARSILSTFMISLCRRVLI 556
+A ++ ++S +V++ +I+ LC+ L+
Sbjct: 133 SALKLLRMIEDRSTRPNVVMYNTIID----GLCKDKLV 166
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/480 (22%), Positives = 214/480 (44%), Gaps = 25/480 (5%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++++L +I +VL ++ +Y I+ + +G + A V ++
Sbjct: 124 TYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDL 183
Query: 146 KF-NCE-DIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
C D+G CN +L + G +D AL + ++ G E + + + C
Sbjct: 184 HARGCALDVGN--CNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAK 241
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ G V +++E+ R N LI + C+ E +VL ++ C PD
Sbjct: 242 RWGCVQELMEEM-VRMACPPNIVTFNTLISY-LCRNGLFERVHEVLAQMVEHGCTPDIRM 299
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + G + +L + G+ P Y + GL R E +EL +
Sbjct: 300 YATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMF 359
Query: 324 SGKFTIDDDVLNALI------GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+DD N L+ G V + I M+E+G +P + T + + CK
Sbjct: 360 DKDCPLDDVTFNILVDFFCQNGLVDRV-----IELLEQMLERGCMPDVITYTTVINGFCK 414
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
DE V + K ++A + SY +++ LC++ R +A ++ +M ++G +
Sbjct: 415 EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPIT 474
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
+N+L+ C++ L+ A +L QM +GCS +L +Y+ +I + G+ + AL L + M+
Sbjct: 475 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 534
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK----SVNHDVMLARSILSTFMISLCRR 553
KG++P+ Y+S+ L +E + ++F+ ++ D +L +++S SLC+R
Sbjct: 535 NKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVIS----SLCKR 590
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/458 (20%), Positives = 206/458 (44%), Gaps = 44/458 (9%)
Query: 78 PNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
P+F P +SY+++LK L ++++ + +++++ + + +I L +
Sbjct: 219 PSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLF 278
Query: 136 QKAFSVFNE-VKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
++ V + V+ C P+I +++ + +G+++ A ++ + M G++ + + +
Sbjct: 279 ERVHEVLAQMVEHGCT---PDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCY 335
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
+ C + + +L E+ ++ + + V +++ FC+ V+ ++L+++
Sbjct: 336 NTLLKGLCSAERWEETEELLAEMFDKDCPLDD--VTFNILVDFFCQNGLVDRVIELLEQM 393
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
R C PD I Y V F G + E ++LK G P T Y IV + +
Sbjct: 394 LERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYT------IVLKGL 447
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
C A+ ++ +D+++ +I ++P + NF
Sbjct: 448 CSAE---------RWVDAEDLMSQMIQQGCPLNPITFNTLINF----------------- 481
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
LCK+ ++ +E+ K + N D+ SY+ ++ L +G+ EA ++ M KG+
Sbjct: 482 --LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMS 539
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P+ Y+S+ A RE + +++D + + + YN +IS + GE E A+
Sbjct: 540 PNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEF 599
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
M+ G P+ +TYT L+ GL E ++ A E+ +
Sbjct: 600 LAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTE 637
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 160/363 (44%), Gaps = 5/363 (1%)
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
+ C ++ L++LDE+ +R + I + +I+ C+G A +VL++L R
Sbjct: 129 VRALCARGRIADALAVLDEMPRRGCAPI--PPMYHVILEAACRGGGFRSAVRVLEDLHAR 186
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
C D +V GSV E +L+ G P Y + GL + +R
Sbjct: 187 GCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCV 246
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSV--SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+EL E +V + N LI + + + R V M+E G P + + +
Sbjct: 247 QELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQ-MVEHGCTPDIRMYATIID 305
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
+CK + E+ + + ++ YN ++ LC++ R E ++ EM K
Sbjct: 306 GICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPL 365
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
D +N L++ C+ L+ +L +QM GC ++ TY +I+ F + G I+ A+ L
Sbjct: 366 DDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLL 425
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+M G P+ +YT +L+GLC A ++ ++ + L +T + LC++
Sbjct: 426 KSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKK 485
Query: 554 VLI 556
L+
Sbjct: 486 GLV 488
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN MV+ C +G+L A + + + P+ Y ++ A C + A + D+M
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
GC+ Y++++ G A+R+ ++ +G A D +L +C + ++
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 523 AAFEVF 528
A +
Sbjct: 210 EALHLL 215
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 162/326 (49%), Gaps = 7/326 (2%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
II K + EE++KVL+E+ C PD A+ V + F ++ + V + + G
Sbjct: 16 IIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESG 75
Query: 292 VAPRTNDYREFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALIGSVSS---IDPR 347
P Y I GL ++ E+ K L E+++ G+ T ++L+ +++ +D
Sbjct: 76 YKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQ-TPSMQAYSSLVRALAKARRVDHA 134
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
S++ F+ MI G P L LC+ K + E +K + + ++ YNV++
Sbjct: 135 SSL--FDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLL 192
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
LC+SG+L +A + EMK PDV YN+L++A C+ + KL++ M A+G
Sbjct: 193 HGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYV 252
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N+ T++ LI GE+E AL +F +MLE G P+ TYT+L+ GLC+ + A E+
Sbjct: 253 PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQAREL 312
Query: 528 FNKSVNHDVMLARSILSTFMISLCRR 553
F K + ++ + C+R
Sbjct: 313 FEKMTQACIPPDAVAYNSLIAGYCKR 338
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 202/463 (43%), Gaps = 20/463 (4%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N + +Y SI+KSL + VL+++ D + ++ + N +KA
Sbjct: 5 NIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKA 64
Query: 139 FSVFN---EVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
V+ E + +++ I L+ LA G +D +LK+ EM RG S +
Sbjct: 65 REVYQHMVESGYKPDNVSYHI---LIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSL 121
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGS-----VIAVLIIHGFCKGKRVEEAFKVLD 250
+ + ++ S+ DE MI G ++ +I G C+ +V++A +
Sbjct: 122 VRALAKARRVDHASSLFDE-------MIRGGHHPDRLMFYELILGLCQAGKVKDASERFK 174
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
++ C+P+ Y ++ G + + + + + +P Y + + R
Sbjct: 175 QMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKAR 234
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
R+ E +L E + + + + + LI G + + A+ F M+E G P T +
Sbjct: 235 RVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYT 294
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR- 428
L LC+ K + E+++ ++ D +YN +++ C G + EA + +EM
Sbjct: 295 TLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGG 354
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
GL P + +N+L++ C+ L A +L +M G + + TY ILI+ S +++
Sbjct: 355 AGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDE 414
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
AL ++ M EK D + S + GLC+ N+ A+ VF +
Sbjct: 415 ALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEAT 457
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 174/416 (41%), Gaps = 14/416 (3%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SYH ++ L+ +++ +L ++ + T Y ++ +L + + A S+F+E
Sbjct: 81 VSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDE 140
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + L+ L G + +A + F +M G + + + V + C + +
Sbjct: 141 MIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQ 200
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L Q ++ E++ +S V ++ CK +RVEE K+ + +R P+ I +
Sbjct: 201 LEQANTLFAEMKS--HSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITF 258
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ G + + V + G P Y I GL ++ +A+EL E +
Sbjct: 259 STLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQ 318
Query: 325 GKFTIDDDVLNALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
D N+LI S+D + ++ G PT+ T + L CK K
Sbjct: 319 ACIPPDAVAYNSLIAGYCKRGSMD-EAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKL 377
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG--LDP--DVSF 437
E+ + D +Y ++++ L + +L EA V ++M+ K LDP VSF
Sbjct: 378 GRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSF 437
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
L C+ + A +++ SG N +T+ IL ++G +E A +L
Sbjct: 438 VGGL----CKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 489
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 80/151 (52%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y+ ++ L + E+Y V++EM G +PDV +N +M+ R + + A++++ M
Sbjct: 12 TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 71
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
SG + +Y+ILI +++G+++ +L++ M+ +G P Y+SL+ L + +
Sbjct: 72 VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRV 131
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A +F++ + R + ++ LC+
Sbjct: 132 DHASSLFDEMIRGGHHPDRLMFYELILGLCQ 162
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M +K + T S++ K+L K K +E +V + + A D+ ++N ++ S
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ +A V Q M G PD Y+ L+ + L + K+ +M G + +++ Y+
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
L+ ++ ++ A LF M+ G PD + L+ GLCQ ++ A E F + H
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180
Query: 536 VMLARSILSTFMISLC 551
+ + + LC
Sbjct: 181 CQPNVPVYNVLLHGLC 196
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/507 (22%), Positives = 224/507 (44%), Gaps = 30/507 (5%)
Query: 56 INPYLLTHHSLALGF---------FNWASQQPNFTHSP--LSYHSILKSLSLSRQINAID 104
++P ++T ++L G N Q T P +++ +++ L +I
Sbjct: 145 LHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV 204
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLA 162
++L ++ + + Y I+ + + +T A ++ +++ I P I ++++
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKME-EVSHIIPNVVIYSAIID 263
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
L DG +A +F EM +G+ + I FC + + +L E+ +R+
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK--- 320
Query: 223 INGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
I+ V+ +I+ F K + EA ++ DE+ R P+ I Y + + F + E
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
+ G +P + I G +RI + EL + D N LI
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440
Query: 342 SSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA------- 393
+ D +A+ MI G P + T L LC K + +E++KV+
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Query: 394 ----NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
N D+++YN+++S L G+ EA + +EM +G+ PD Y+S+++ C++
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
L A +++D M + S N+ T+ LI+ + + G ++ L LF M +G+ +A TY
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYI 620
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDV 536
+L+ G + N+ A ++F + ++ V
Sbjct: 621 TLICGFRKVGNINGALDIFQEMISSGV 647
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 168/383 (43%), Gaps = 4/383 (1%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D + ++ +M + + F + I FC +KL LS ++ K + V
Sbjct: 96 DLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKL--GLHPDVVTFN 153
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++HG C RV EA + ++ C+P+ + + + G + E +L + +
Sbjct: 154 TLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED 213
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL-NALIGSVSSIDPRS- 348
G+ P Y + G+ + A L + I + V+ +A+I S+ S
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A F M EKG P L T +++ C + + ++ + + D+ +YN +++
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
G+ EA + EM +G+ P+ Y+S+++ C+++ L A+ ++ M GCS
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
NL T+N LI + I+ + L H M E G+ D TTY +L+ G +L AA ++
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 529 NKSVNHDVMLARSILSTFMISLC 551
+ ++ + T + LC
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLC 476
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/464 (20%), Positives = 200/464 (43%), Gaps = 19/464 (4%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLA 162
S+ ++++ +I D + +I A S F K + P++ N+LL
Sbjct: 100 SLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFG--KITKLGLHPDVVTFNTLLH 157
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
L + + AL +F +M + + F + C ++ + +++LD R E+ +
Sbjct: 158 GLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLD--RMMEDGL 215
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELR-IRECKPDFIAYRIVAEEFKLMGSVFERE 281
+ I+ G CK A +L ++ + P+ + Y + + G + +
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS- 340
+ + ++ G+ P Y I+G R +A++L + ++ K + D NALI +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
V A ++ M+ +G +P T S++ CK+N+ D ++ +++ ++
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNL 395
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
++N ++ C + R+ + ++ EM GL D + YN+L+ L A L +
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE-----------KGVAPDATTYT 509
M +SG ++ T + L+ + G+++ AL +F M + GV PD TY
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
L+ GL E A E++ + + ++ S+ + LC++
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 166/393 (42%), Gaps = 51/393 (12%)
Query: 152 IGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
I P++ N+L+ +G A +++DEM RG+ +TI + I FC+ +L
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
M + + S + +I G+C KR+++ ++L E+ D Y +
Sbjct: 381 HMFYLMATKGCS--PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
F L+G + +L++ G+ P + GL ++ +A E+ +V+ K +
Sbjct: 439 GFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL 498
Query: 330 D---------DDV--LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
D DV N LI G ++ A + M +G VP T S++ LCK
Sbjct: 499 DASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+++ DE +++ + + + ++ ++ +++ C +GR+ + + EM R+G+
Sbjct: 559 QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI------ 612
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
N TY LI F +VG I GAL +F M+
Sbjct: 613 -----------------------------VANAITYITLICGFRKVGNINGALDIFQEMI 643
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
GV PD T ++L GL + L+ A + K
Sbjct: 644 SSGVYPDTITIRNMLTGLWSKEELKRAVAMLEK 676
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 115/511 (22%), Positives = 221/511 (43%), Gaps = 68/511 (13%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLS-----------------------LSRQINAI 103
AL F+ S++ + +P Y +I+ L+ SR ++
Sbjct: 53 ALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSV 112
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGP--EICNSLL 161
+VL +++ +K T +V+ +I + + ++A V+ ++ D+ P + CN +L
Sbjct: 113 FNVLSRLESSKFT--PNVFGVLIIAFSEMGLVEEALWVYYKM-----DVLPAMQACNMVL 165
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
L G D K++ +M RG + + +G I C + + DE+ E
Sbjct: 166 DGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI--EKK 223
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
+ VI ++I G C R+ EA + +R P+ Y + + + + V +
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
+ ++ G+ P + I GL C+ E+ + + KF ID
Sbjct: 284 ELYQEMLGDGLLPNVVTFGILIDGL------CKTDEM---VSARKFLID----------- 323
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
M G VP + + L CK E + ++ + ++ D+
Sbjct: 324 --------------MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVF 369
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y++++ LC R+ EA G++QEMK+KG P+ YN+L++ C+E + A ++ QM
Sbjct: 370 TYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G N+ T++ LI + + G++E A+ L+ M+ KG+ PD YT+L++G ++ N
Sbjct: 430 TEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNT 489
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ AF + + + LS + LC+
Sbjct: 490 KEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 176/427 (41%), Gaps = 25/427 (5%)
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLL 161
D V + N +T Y +I + + KAF +F+E+ + I P I L+
Sbjct: 183 DMVARGASPNVVT-----YGTLIDGCCRQGDFLKAFRLFDEMIE--KKIFPTVVIYTILI 235
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
L + I A MF M + G+ + + + +C+ A + + L + E+ +
Sbjct: 236 RGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLG--DG 293
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
++ V ++I G CK + A K L ++ P+ Y + + + G++ E
Sbjct: 294 LLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GS 340
+ + K + P Y I GL R+ EA L + + F + N LI G
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ AI + M EKG P + T S L CK K + + +Y + D+
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDV 473
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW-- 458
+Y ++ G +EA+ + +EM+ GL P+V + L++ C++ + A KL+
Sbjct: 474 VAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLA 533
Query: 459 -----------DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+++ S CS N Y LI G I A + F +M G+ PD T
Sbjct: 534 KTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFT 593
Query: 508 YTSLLEG 514
+++G
Sbjct: 594 CIVIIQG 600
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 107/516 (20%), Positives = 210/516 (40%), Gaps = 52/516 (10%)
Query: 26 PARKWTPLLEQTLHQLGLRDSL---SPSLVARVINPYLLTHHSL------------ALGF 70
PA + ++ L + G D++ +VAR +P ++T+ +L A
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
F+ ++ F + + Y +++ L +I+ +S+ + ++ + + + Y ++
Sbjct: 216 FDEMIEKKIFP-TVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYC 274
Query: 131 QGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM-SHRGVEFST 189
+ + +KA ++ E+ + + LL + + G + + L DEM S R
Sbjct: 275 KIAHVKKALELYQEM----------LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM 324
Query: 190 IGFGV----FIWK-----FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
FGV F++ +C+ L + LS+ E+ K E ++ ++I G C
Sbjct: 325 ASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE--ILPDVFTYSILIKGLCGVD 382
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
R+EEA +L E++ + P+ + Y + + + G++ + V + + G+ P +
Sbjct: 383 RMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFS 442
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK 359
I G ++ A L +V D ALI G + + A M E
Sbjct: 443 TLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEA 502
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES-------------YNVM 406
G P + TLS L LCK + + ++++ + D + Y +
Sbjct: 503 GLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTAL 562
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LCT GR+ +A +M+ GL PDV +++ R LR L + G
Sbjct: 563 IQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGI 622
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
N Y +L + E G ++ ALR ++ G+
Sbjct: 623 IPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGIG 658
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 200/469 (42%), Gaps = 40/469 (8%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY+S+L +L S + + +S + ++ + Y +I + K KA + N +
Sbjct: 116 SYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWM 175
Query: 146 KFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ P++ +L+ LA +GY+ +ALK+FDEM RGV + + I F +
Sbjct: 176 WE--QGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKG 233
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ + + + K + N V+I +G CK + +E+F++ ++ E D
Sbjct: 234 DILNASEIWERLLKGPSVYPNIPSYNVMI-NGLCKCGKFDESFEIWHRMKKNERGQDLYT 292
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + G++ V K+ + GV+P Y + G + RI E EL +V+
Sbjct: 293 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM- 351
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
EK T+ + + L + L + K DE
Sbjct: 352 ----------------------------------EKEGCRTVVSYNILIRGLFENAKVDE 377
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ ++++L D D +Y V+V LC +G L +A +++E + D D Y+S++
Sbjct: 378 AISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMIN 437
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
CRE L + DQM GC N N +I+ F ++E ALR F NM+ KG P
Sbjct: 438 GLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFP 497
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
TY +L+ GL + A+ + + ++ S M LC+
Sbjct: 498 TVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQ 546
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 190/435 (43%), Gaps = 28/435 (6%)
Query: 54 RVINPYLLTHHSLALGFFN----------WAS--QQPNFTHSPLSYHSILKSLSLSRQIN 101
R + P + ++ L GFF W + P+ + SY+ ++ L + +
Sbjct: 213 RGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFD 272
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NS 159
+ ++K N+ D Y +I L N A V+ E+ N + P++ N+
Sbjct: 273 ESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAEN--GVSPDVVVYNT 330
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
+L G I+ L+++ M G + + + + I ENAK+ + +S+ + + +++
Sbjct: 331 MLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKD 389
Query: 220 ---NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+SM G +++HG CK + +A +L+E D AY + G
Sbjct: 390 CCADSMTYG-----VLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGR 444
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLN 335
+ E VL + K G P + I G + ++ +A + G ++ G F N
Sbjct: 445 LDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVV-TYN 503
Query: 336 ALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
LI +S + S A M+ KG P + T S L LC+ K D + ++
Sbjct: 504 TLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK 563
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ D++ +N+++ LC+SG++ +A + EMK++ P++ +N+LME + A
Sbjct: 564 GFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERA 623
Query: 455 KKLWDQMFASGCSGN 469
K+WD + S S N
Sbjct: 624 SKIWDHILQSWSSSN 638
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 176/397 (44%), Gaps = 8/397 (2%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
Y +I L + ++F +++ +K N ++L+ L G +D A +++ EM+
Sbjct: 258 YNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMA 317
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
GV + + + + ++ + L + + K + V ++I G + +
Sbjct: 318 ENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTV---VSYNILIRGLFENAK 374
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
V+EA + + L ++C D + Y ++ G + + +L++ T Y
Sbjct: 375 VDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSS 434
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKG 360
I GL E R+ E + + + + V NA+I G V + A+ FF M+ KG
Sbjct: 435 MINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKG 494
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
PT+ T + L L K + E + K + + +M +Y+++++ LC +L A
Sbjct: 495 CFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMAL 554
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+ + KG PDV +N ++ C + A +L+ +M C NL T+N L+ F
Sbjct: 555 NLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGF 614
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+V + E A +++ ++L+ +++ +E CQ
Sbjct: 615 YKVRDFERASKIWDHILQSW----SSSNCYYMEHTCQ 647
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 112/235 (47%), Gaps = 3/235 (1%)
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEK-GRVPTLSTLSNLSKNLCK 377
E+I + K +DV +I + + P A+ F M E G P + + ++L L +
Sbjct: 67 ELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIE 126
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
NK DE + ++++YN+++ C + +A ++ M +G PDV
Sbjct: 127 SNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFS 186
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
Y +L+ + + + A KL+D+M G + ++ YNILI F + G+I A ++ +L
Sbjct: 187 YGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLL 246
Query: 498 E-KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+ V P+ +Y ++ GLC+ +FE++++ ++ ST + LC
Sbjct: 247 KGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 301
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 210/467 (44%), Gaps = 19/467 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+++ +++ L +I ++L ++ + + Y I+ + + +T A ++ +
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244
Query: 145 VKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ I P I ++++ L DG +A +F EM +G+ + I FC +
Sbjct: 245 ME-EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS 303
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ +L E+ +R+ I+ V+ +I+ F K + EA ++ DE+ R P+
Sbjct: 304 GRWSDAEQLLQEMLERK---ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
I Y + + F + E + G +P + I G +RI + EL
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420
Query: 322 IVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ D N LI + D +A+ MI G P + T L LC K
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480
Query: 381 SDELVEVYKVLSA-----------NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
+ +E++KV+ N D+++YN+++S L G+ EA + +EM +
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
G+ PD Y+S+++ C++ L A +++D M + S N+ T+ LI+ + + G ++
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
L LF M +G+ +A TY +L+ G + N+ A ++F + ++ V
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 168/383 (43%), Gaps = 4/383 (1%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D + ++ +M + + F + I FC +KL LS ++ K + V
Sbjct: 96 DLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKL--GLHPDVVTFT 153
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++HG C RV EA + ++ C+P+ + + + G + E +L + +
Sbjct: 154 TLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED 213
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL-NALIGSVSSIDPRS- 348
G+ P Y + G+ + A L + I + V+ +A+I S+ S
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A F M EKG P L T +++ C + + ++ + + D+ +YN +++
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
G+ EA + EM +G+ P+ Y+S+++ C+++ L A+ ++ M GCS
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
NL T+N LI + I+ + L H M E G+ D TTY +L+ G +L AA ++
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 529 NKSVNHDVMLARSILSTFMISLC 551
+ ++ + T + LC
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLC 476
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/461 (21%), Positives = 195/461 (42%), Gaps = 58/461 (12%)
Query: 111 KVNKITLDSSVYRF--IIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEICN--SLLAVLA 165
K+ K+ L V F ++ L +A ++F+++ + C P + +L+ L
Sbjct: 139 KITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCR---PNVVTFTTLMNGLC 195
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE--NSMI 223
+G I A+ + D M G++ + I +G + C K G +S L+ +RK E + +I
Sbjct: 196 REGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC---KKGDTVSALNLLRKMEEVSHII 252
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
VI II CK R +A + E++ + PD Y + F G + E +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
L++ + ++P Y I + E + EA+EL
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEEL------------------------- 347
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
++ M+ +G +P T S++ CK+N+ D ++ +++ ++ ++
Sbjct: 348 ---------YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N ++ C + R+ + ++ EM GL D + YN+L+ L A L +M +
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE-----------KGVAPDATTYTSLL 512
SG ++ T + L+ + G+++ AL +F M + GV PD TY L+
Sbjct: 459 SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILI 518
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
GL E A E++ + + ++ S+ + LC++
Sbjct: 519 SGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 166/393 (42%), Gaps = 51/393 (12%)
Query: 152 IGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
I P++ N+L+ +G A +++DEM RG+ +TI + I FC+ +L
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
M + + S + +I G+C KR+++ ++L E+ D Y +
Sbjct: 381 HMFYLMATKGCS--PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
F L+G + +L++ G+ P + GL ++ +A E+ +V+ K +
Sbjct: 439 GFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL 498
Query: 330 D---------DDV--LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
D DV N LI G ++ A + M +G VP T S++ LCK
Sbjct: 499 DASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+++ DE +++ + + + ++ ++ +++ C +GR+ + + EM R+G+
Sbjct: 559 QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI------ 612
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
N TY LI F +VG I GAL +F M+
Sbjct: 613 -----------------------------VANAITYITLICGFRKVGNINGALDIFQEMI 643
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
GV PD T ++L GL + L+ A + K
Sbjct: 644 SSGVYPDTITIRNMLTGLWSKEELKRAVAMLEK 676
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 86/205 (41%), Gaps = 35/205 (17%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F+ M+ +P++ L + + + D ++ +Y+ + D+ S+N+++
Sbjct: 63 AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C+ +L A ++ + GL PDV + +L+ C ED
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVED------------------- 163
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ SE AL LFH M E P+ T+T+L+ GLC+E + A +
Sbjct: 164 ----------RVSE------ALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207
Query: 529 NKSVNHDVMLARSILSTFMISLCRR 553
++ + + + T + +C++
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKK 232
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 217/505 (42%), Gaps = 56/505 (11%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQV-----KVNKITLDSSV 121
AL F+ S++ + +P Y +I+ L+ ++ +++ + K + + SV
Sbjct: 53 ALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCSV 112
Query: 122 YRFIIPSLIQGKNTQKAFSV----FNEVKFNCE--------DIGP--EICNSLLAVLASD 167
+ ++ L K T F V F+E+ E D+ P + CN +L L
Sbjct: 113 FN-VLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKK 171
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G D K++ +M RG + + +G I C + + DE+ E + V
Sbjct: 172 GRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI--EKKIFPTVV 229
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
I ++I G C R+ EA + +R P+ Y + + + + V + + +
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEM 289
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR 347
G+ P + I GL C+ E+ + + KF ID
Sbjct: 290 LGDGLLPNVVTFGILIDGL------CKTDEM---VSARKFLID----------------- 323
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
M G VP + + L CK E + ++ + ++ D+ +Y++++
Sbjct: 324 --------MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILI 375
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
LC R+ EA G++QEMK+KG P+ YN+L++ C+E + A ++ QM G
Sbjct: 376 KGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIE 435
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N+ T++ LI + + G++E A+ L+ M+ KG+ PD YT+L++G ++ N + AF +
Sbjct: 436 PNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRL 495
Query: 528 FNKSVNHDVMLARSILSTFMISLCR 552
+ + LS + LC+
Sbjct: 496 HKEMQEAGLHPNVFTLSCLIDGLCK 520
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 176/427 (41%), Gaps = 25/427 (5%)
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLL 161
D V + N +T Y +I + + KAF +F+E+ + I P I L+
Sbjct: 183 DMVARGASPNVVT-----YGTLIDGCCRQGDFLKAFRLFDEMIE--KKIFPTVVIYTILI 235
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
L + I A MF M + G+ + + + +C+ A + + L + E+ +
Sbjct: 236 RGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLG--DG 293
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
++ V ++I G CK + A K L ++ P+ Y + + + G++ E
Sbjct: 294 LLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GS 340
+ + K + P Y I GL R+ EA L + + F + N LI G
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ AI + M EKG P + T S L CK K + + +Y + D+
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDV 473
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW-- 458
+Y ++ G +EA+ + +EM+ GL P+V + L++ C++ + A KL+
Sbjct: 474 VAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLA 533
Query: 459 -----------DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+++ S CS N Y LI G I A + F +M G+ PD T
Sbjct: 534 KTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFT 593
Query: 508 YTSLLEG 514
+++G
Sbjct: 594 CIVIIQG 600
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 103/489 (21%), Positives = 199/489 (40%), Gaps = 53/489 (10%)
Query: 51 LVARVINPYLLTHHSL------------ALGFFNWASQQPNFTHSPLSYHSILKSLSLSR 98
+VAR +P ++T+ +L A F+ ++ F + + Y +++ L
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFP-TVVIYTILIRGLCGES 242
Query: 99 QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN 158
+I+ +S+ + ++ + + + Y ++ + + +KA ++ E+ + +
Sbjct: 243 RISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEM----------LGD 292
Query: 159 SLLAVLASDGYIDNALKMFDEM-SHRGVEFSTIGFGV----FIWK-----FCENAKLGQV 208
LL + + G + + L DEM S R FGV F++ +C+ L +
Sbjct: 293 GLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEA 352
Query: 209 LSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVA 268
LS+ E+ K E ++ ++I G C R+EEA +L E++ + P+ + Y +
Sbjct: 353 LSLHSEIEKHE--ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFT 328
+ + G++ + V + + G+ P + I G ++ A L +V
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLL 470
Query: 329 IDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
D ALI G + + A M E G P + TLS L LCK + + +++
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530
Query: 388 YKVLSANDYFTDMES-------------YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
+ + D + Y ++ LCT GR+ +A +M+ GL PD
Sbjct: 531 FLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPD 590
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V +++ R LR L + G N Y +L + E G ++ AL
Sbjct: 591 VFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSAL---- 646
Query: 495 NMLEKGVAP 503
+ +GV P
Sbjct: 647 SFCGEGVQP 655
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 94/480 (19%), Positives = 179/480 (37%), Gaps = 42/480 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y ++K L ++ D +L+++K ++ Y +I + N +KA V ++
Sbjct: 369 FTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQ 428
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ + I P I ++L+ G ++ A+ ++ EM +G+ + + I ++
Sbjct: 429 MTE--KGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKD 486
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVL------------- 249
+ + E++ E + +I G CK R+ +A K+
Sbjct: 487 GNTKEAFRLHKEMQ--EAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKT 544
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
+EL C P+ + Y + + G +F+ R G+ P I G
Sbjct: 545 NELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRA 604
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK-GRV---PT 364
+ + L I+ + V L G S +SA+ F ++ RV P
Sbjct: 605 MHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPW 664
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM------------VSFLCT 412
S LC + E Y F + ++ + V F+
Sbjct: 665 GSYTIRSRFQLCVVTEKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQ 724
Query: 413 SG--RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
G R +A + ++M+ PD+ + AC L + + + G +L
Sbjct: 725 KGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDL 784
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
N LI+ +S+ GEI A RLF +K D TT+TS++ G + A ++F +
Sbjct: 785 CLNNSLINMYSKCGEIGTARRLFDGTQKK----DVTTWTSMIVGHALHGQAEEALQLFTE 840
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 175/388 (45%), Gaps = 12/388 (3%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D A ++ +EM + G+ + +G+ I C+N + + ++L+E+ E N + A
Sbjct: 437 DGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMIS-EGLKPNAFMYAP 495
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
LII G K + A + L+ + PD Y + + +G + E E + +K
Sbjct: 496 LII-GHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKR 554
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G+ P Y I G R + +A +L + +++ + D L+ G S D
Sbjct: 555 GLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKV 614
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
M+ G P + +NL + + V + N D+ Y+ ++S
Sbjct: 615 SSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISG 674
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC + +A G++ EM ++GL+P + YN+L++ CR + A+ ++D + A G N
Sbjct: 675 LCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPN 734
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF---- 525
TY LI + G+I A L+ +ML++G+APDA Y L G +L+ A
Sbjct: 735 CVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTE 794
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCRR 553
E+FN+ H S+ ST + C+R
Sbjct: 795 EMFNRGYAH-----VSLFSTLVRGFCKR 817
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 164/378 (43%), Gaps = 3/378 (0%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN LL L ++ K+ M G+ + F+ C+ + +E+R
Sbjct: 213 CNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMR 272
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+R+ +M V ++I G C+ VEEAF +E+ PD Y + G
Sbjct: 273 RRDCAM--NEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGR 330
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ E + +L + G+ P Y + G + E + EA ++ ++S + + +
Sbjct: 331 LKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDN 390
Query: 337 LIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI + I A N MI+ G P T L + + D E+ + +
Sbjct: 391 LIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSG 450
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ +Y +M++ LC +G +EA +++EM +GL P+ Y L+ +E + A
Sbjct: 451 ILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLAC 510
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ + M + +L YN LI S VG IE A + + ++G+ PD TY+ L+ G
Sbjct: 511 ESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGY 570
Query: 516 CQETNLQAAFEVFNKSVN 533
C+ NL+ A ++ + +N
Sbjct: 571 CKTRNLEKADQLLQQMLN 588
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 35/234 (14%)
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
FM G P + T S + CK D +V++ + D + +YNVM+S LC S
Sbjct: 234 GFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRS 293
Query: 414 G-----------------------------------RLREAYGVIQEMKRKGLDPDVSFY 438
G RL+EA ++ EM GL P+V Y
Sbjct: 294 GAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVY 353
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
+L++ +E A + ++M ++G N Y+ LI ++G++ A +L + M++
Sbjct: 354 ATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIK 413
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
G PD TY L++G Q + AFE+ N+ N ++ + LC+
Sbjct: 414 VGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQ 467
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 106/488 (21%), Positives = 201/488 (41%), Gaps = 21/488 (4%)
Query: 40 QLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFT-----------HSPLSYH 88
QLG L ++ P T+H L G F + F + +Y
Sbjct: 400 QLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYG 459
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR-FIIPSLIQGKNTQKAFSVFNEVKF 147
++ L + + ++L+++ + ++ +Y II +G + S+ N K
Sbjct: 460 IMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKA 519
Query: 148 NCEDIGPEI-C-NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
N + P++ C NSL+ L++ G I+ A + + ++ RG+ + I +C+ L
Sbjct: 520 N---VLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNL 576
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ +L ++ + + + ++ G+ K E+ +L + KPD Y
Sbjct: 577 EKADQLLQQMLN--SGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYG 634
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
IV ++ +VL + K G+ P + Y I GL + +A L + +
Sbjct: 635 IVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKE 694
Query: 326 KFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
NALI G S D A F+ ++ KG +P T + L CK +
Sbjct: 695 GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDA 754
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
++YK + D YNV+ + + L +A + +EM +G VS +++L+
Sbjct: 755 FDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY-AHVSLFSTLVRG 813
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C+ L+ +KL M N +T +I++F + G++ A R+F + +K +
Sbjct: 814 FCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQS 873
Query: 505 ATTYTSLL 512
+T SLL
Sbjct: 874 STDRFSLL 881
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 90/206 (43%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
R+A M + G PT + L K+L + + + + ++ + D+ +Y+
Sbjct: 192 RTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTF 251
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ C + A V +EM+R+ + YN ++ CR + A ++M G
Sbjct: 252 LEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGL 311
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
S + TY L++ + G ++ A L M G+ P+ Y +L++G +E AF+
Sbjct: 312 SPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFD 371
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+ N+ ++ V + + + LC+
Sbjct: 372 ILNEMISAGVQPNKIMYDNLIRGLCK 397
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 65/149 (43%)
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+V+V +G +R A V+ M GL P N L++ R D + KL M
Sbjct: 179 DVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEG 238
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
+G ++ TY+ + + + + A ++F M + A + TY ++ GLC+ ++
Sbjct: 239 AGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEE 298
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCR 552
AF + V++ + M LC+
Sbjct: 299 AFGFKEEMVDYGLSPDAFTYGALMNGLCK 327
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 114/507 (22%), Positives = 224/507 (44%), Gaps = 30/507 (5%)
Query: 56 INPYLLTHHSLALGF---------FNWASQQPNFTHSP--LSYHSILKSLSLSRQINAID 104
++P ++T ++L G N Q T P +++ +++ L +I
Sbjct: 145 LHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAV 204
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLA 162
++L ++ + + Y I+ + + +T A ++ +++ I P I ++++
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKME-EVSHIIPNVVIYSAIID 263
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
L DG +A +F EM +G+ + I FC + + +L E+ +R+
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK--- 320
Query: 223 INGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
I+ V+ +I+ F K + EA ++ DE+ R P+ I Y + + F + E
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
+ G +P + I G +RI + EL + D N LI
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440
Query: 342 SSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA------- 393
+ D +A+ MI G P + T L LC K + +E++KV+
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Query: 394 ----NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
N D+++YN+++S L G+ EA + +EM +G+ PD Y+S+++ C++
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
L A +++D M + S N+ T+ LI+ + + G ++ L LF M +G+ +A TY
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYI 620
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDV 536
+L+ G + N+ A ++F + ++ V
Sbjct: 621 TLICGFRKVGNINGALDIFQEMISSGV 647
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 168/383 (43%), Gaps = 4/383 (1%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D + ++ +M + + F + I FC +KL LS ++ K + V
Sbjct: 96 DLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKL--GLHPDVVTFN 153
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++HG C RV EA + ++ C+P+ + + + G + E +L + +
Sbjct: 154 TLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED 213
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL-NALIGSVSSIDPRS- 348
G+ P Y + G+ + A L + I + V+ +A+I S+ S
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A F M EKG P L T +++ C + + ++ + + D+ +YN +++
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
G+ EA + EM +G+ P+ Y+S+++ C+++ L A+ ++ M GCS
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
NL T+N LI + I+ + L H M E G+ D TTY +L+ G +L AA ++
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 529 NKSVNHDVMLARSILSTFMISLC 551
+ ++ + T + LC
Sbjct: 454 QEMISSGLCPDIVTCDTLLDGLC 476
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/464 (20%), Positives = 200/464 (43%), Gaps = 19/464 (4%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLA 162
S+ ++++ +I D + +I A S F K + P++ N+LL
Sbjct: 100 SLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFG--KLTKLGLHPDVVTFNTLLH 157
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
L + + AL +F +M + + F + C ++ + +++LD R E+ +
Sbjct: 158 GLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLD--RMMEDGL 215
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELR-IRECKPDFIAYRIVAEEFKLMGSVFERE 281
+ I+ G CK A +L ++ + P+ + Y + + G + +
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS- 340
+ + ++ G+ P Y I+G R +A++L + ++ K + D NALI +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
V A ++ M+ +G +P T S++ CK+N+ D ++ +++ ++
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNL 395
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
++N ++ C + R+ + ++ EM GL D + YN+L+ L A L +
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE-----------KGVAPDATTYT 509
M +SG ++ T + L+ + G+++ AL +F M + GV PD TY
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
L+ GL E A E++ + + ++ S+ + LC++
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 166/393 (42%), Gaps = 51/393 (12%)
Query: 152 IGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
I P++ N+L+ +G A +++DEM RG+ +TI + I FC+ +L
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
M + + S + +I G+C KR+++ ++L E+ D Y +
Sbjct: 381 HMFYLMATKGCS--PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
F L+G + +L++ G+ P + GL ++ +A E+ +V+ K +
Sbjct: 439 GFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL 498
Query: 330 D---------DDV--LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
D DV N LI G ++ A + M +G VP T S++ LCK
Sbjct: 499 DASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+++ DE +++ + + + ++ ++ +++ C +GR+ + + EM R+G+
Sbjct: 559 QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI------ 612
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
N TY LI F +VG I GAL +F M+
Sbjct: 613 -----------------------------VANAITYITLICGFRKVGNINGALDIFQEMI 643
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
GV PD T ++L GL + L+ A + K
Sbjct: 644 SSGVYPDTITIRNMLTGLWSKEELKRAVAMLEK 676
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 210/474 (44%), Gaps = 56/474 (11%)
Query: 77 QPNFTHSPLSYHSILKSL-SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
QPN ++Y +I+ + + ++A++ + K +V+ I + +Y II L +
Sbjct: 214 QPN----QITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRH 269
Query: 136 QKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
A ++F E++ ++I P+I N ++ G +A ++ EM R + + F
Sbjct: 270 SDAHNLFIEMQE--KEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFS 327
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
I F + K + + DE+ R S+I +V +I GFCK R++ A +
Sbjct: 328 ALINAFVKEGKFFEAEELYDEMLPR--SIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTP 385
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+ C PD I + + + V + +L + + G+ T Y I G C
Sbjct: 386 TKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGF------C 439
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+ +L D+L +I S G P + T + L
Sbjct: 440 QVGDLNAA---------QDLLQEMISS-------------------GVCPNVVTCNTLLD 471
Query: 374 NLCKRNKSDELVEVYKVLSA-----------NDYFTDMESYNVMVSFLCTSGRLREAYGV 422
LC K + +E++K + N D+++YN+++ L G+ EA +
Sbjct: 472 GLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEEL 531
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+EM +G+ PD Y+S+++ C++ L A +++D M + S ++ T+N LI+ + +
Sbjct: 532 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCK 591
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
G ++ L LF M ++G+ DA TY +L+ G + N+ A ++F + ++ V
Sbjct: 592 AGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGV 645
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 176/409 (43%), Gaps = 50/409 (12%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
+L+ L +G + A+ + D M G++ + I +G + C K+G +S L+ +RK
Sbjct: 186 TTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMC---KMGDTVSALNLLRK 242
Query: 218 RE--NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E + +I VI II G K R +A + E++ +E PD + Y + F + G
Sbjct: 243 MEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISG 302
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ E +L++ + + P + I + E + EA+EL
Sbjct: 303 RWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEEL----------------- 345
Query: 336 ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
++ M+ + +P+ T S++ CK+N+ D ++ +
Sbjct: 346 -----------------YDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKG 388
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D+ ++N +++ C + R+ + ++ EM GL + Y +L+ C+ L A+
Sbjct: 389 CSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQ 448
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE-----------KGVAPD 504
L +M +SG N+ T N L+ + G+++ AL +F M + GV PD
Sbjct: 449 DLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPD 508
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
TY L+ GL E A E++ + + ++ S+ + LC++
Sbjct: 509 VQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 557
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 180/430 (41%), Gaps = 80/430 (18%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ V+ G D + + +M + + F + + FC +KL LS ++ K
Sbjct: 87 LMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLG 146
Query: 220 NSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+ +V+ ++HG C R+ EA + ++ CKP+ + + + G V
Sbjct: 147 ---FHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVV 199
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL- 337
E +L + + G+ P Y + G+ ++G+ + + LN L
Sbjct: 200 EAVALLDRMLEDGLQPNQITYGTIVDGMC---------KMGDTVSA---------LNLLR 241
Query: 338 -IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ VS I P +V +N +I+ L K + + ++ + +
Sbjct: 242 KMEEVSHIIPN--VVIYNTIID---------------GLWKDGRHSDAHNLFIEMQEKEI 284
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
F D+ +YN M++ C SGR +A ++QEM + ++PDV +++L+ A +E A++
Sbjct: 285 FPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEE 344
Query: 457 LWDQMF-----------------------------------ASGCSGNLKTYNILISKFS 481
L+D+M GCS ++ T+N LI+ +
Sbjct: 345 LYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYC 404
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
++ ++L H M E G+ + TYT+L+ G CQ +L AA ++ + ++ V
Sbjct: 405 RAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVV 464
Query: 542 ILSTFMISLC 551
+T + LC
Sbjct: 465 TCNTLLDGLC 474
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 90/188 (47%), Gaps = 6/188 (3%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F +M+ +P++ L + + + D ++ ++K + + S+ +++
Sbjct: 65 AIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMK 124
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C+ +L A ++ + G P V +N+L+ C ED + A L+ QM C
Sbjct: 125 CFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKP 180
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ T+ L++ G + A+ L MLE G+ P+ TY ++++G+C+ + +A +
Sbjct: 181 NVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLL 240
Query: 529 NK--SVNH 534
K V+H
Sbjct: 241 RKMEEVSH 248
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 111/269 (41%), Gaps = 39/269 (14%)
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID 345
K KLG P + + GL VE RI EA +L
Sbjct: 141 KITKLGFHPTVVTFNTLLHGLCVEDRISEALDL--------------------------- 173
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
F+ M + P + T + L LC+ + E V + + + + +Y
Sbjct: 174 -------FHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGT 222
Query: 406 MVSFLCTSGRLREAYGVIQEMKR-KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
+V +C G A ++++M+ + P+V YN++++ ++ A L+ +M
Sbjct: 223 IVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEK 282
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
++ TYN +I+ F G A +L MLE+ + PD T+++L+ +E A
Sbjct: 283 EIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEA 342
Query: 525 FEVFNKSVNHDVMLARSILSTFMISLCRR 553
E++++ + ++ + S+ + C++
Sbjct: 343 EELYDEMLPRSIIPSTVTYSSMIDGFCKQ 371
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 129/565 (22%), Positives = 242/565 (42%), Gaps = 57/565 (10%)
Query: 33 LLEQTLHQLGLRDSLSPSLVARVINPYLLTHHS---------------LALGFFNWASQQ 77
+L+ L Q LR SPS + ++ LTH +AL FF WA
Sbjct: 677 VLDTYLRQPHLR--FSPSKLNLDMDAASLTHEQAISAVALLASEEGSMVALSFFYWAVGF 734
Query: 78 PNFTHSPLSYHSILKSLSLSRQIN-----------------------AIDSVLKQVKVNK 114
P F + Y I+ ++SL + N A+D +L ++
Sbjct: 735 PKFRYFMRLY--IVCTMSLVGKCNLERAHEVVECMVGVFAEIGKLKEAVDMIL-DMRNQG 791
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLA--SDGYIDN 172
+ L + V II + + + A +VF+E+ + + P+ C ++ +G +
Sbjct: 792 LVLTTRVMNRIILVAAEMRLVEYAGNVFDEM--SARGVYPDSCTYKYIIVGYCRNGNVLE 849
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR--ENSMINGSVIAV 230
A + EM RG + I FCE + + + + +V K ++IN S +
Sbjct: 850 ADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSM-- 907
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER--EVVLKKKR 288
I G CK V++AF++L+E+ KP+ + + G ER + LK R
Sbjct: 908 --ISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWT-ERAFRLFLKLIR 964
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPR 347
P + Y I G E ++ A+ L E + + + LI G + +
Sbjct: 965 SDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFS 1024
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A M +G P T +++ LCKR +++E ++ N D +Y +++
Sbjct: 1025 KAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILI 1084
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
S C + +A + +M + G PD+ Y +L+ A CR+++++ ++KL+D++ G +
Sbjct: 1085 SEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLA 1144
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
+TY +I + ++ A++ F M + G APD+ +Y +L+ GLC+E+ L A ++
Sbjct: 1145 PTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQL 1204
Query: 528 FNKSVNHDVMLARSILSTFMISLCR 552
++ ++ + T C+
Sbjct: 1205 YDTMIDKGLSPCEVTRVTLTYEYCK 1229
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 156/360 (43%), Gaps = 43/360 (11%)
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
F E KL + + M+ ++R + ++ + + II + + VE A V DE+ R
Sbjct: 771 FAEIGKLKEAVDMILDMRNQ--GLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVY 828
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD Y+ + + G+V E +R ICE E
Sbjct: 829 PDSCTYKYIIVGYCRNGNVLE----------------------------ADRWICEMMER 860
Query: 319 GEVIVSGKFTIDDDVLNALIGSV--SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
G F +D+ L +I + S+ R A+ FF+ + + G P L S++ LC
Sbjct: 861 G-------FVVDNATLTLIITAFCEKSLVNR-AVWFFHKVTKMGLSPNLINYSSMISGLC 912
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK-GLDPDV 435
KR + E+ + + N + ++ ++ ++ LC G A+ + ++ R P+V
Sbjct: 913 KRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNV 972
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y +++ C+E+ L A+ L+++M G N TY LI + G A L
Sbjct: 973 HTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMEL 1032
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS-LCRRV 554
M +G P+ TY S+++GLC+ + AF++ N + + A + T +IS C+R
Sbjct: 1033 MSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIE-ADGVTYTILISEQCKRA 1091
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/486 (20%), Positives = 188/486 (38%), Gaps = 42/486 (8%)
Query: 98 RQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC 157
R + +V ++ + DS Y++II + N +A E+ +
Sbjct: 810 RLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATL 869
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
++ ++ A+ F +++ G+ + I + I C+ + Q +L+E+ K
Sbjct: 870 TLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVK 929
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKV-LDELRIRECKPDFIAYRIVAEEFKLMGS 276
N +IHG CK E AF++ L +R KP+ Y + +
Sbjct: 930 --NGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEK 987
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ E++ ++ ++ G+ P TN Y I G +A EL E++ + F + N+
Sbjct: 988 LSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNS 1047
Query: 337 LI---------------------------GSVSSI---------DPRSAIVFFNFMIEKG 360
++ G +I D A+VF N M + G
Sbjct: 1048 IVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVG 1107
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P + + L C++N + +++ + E+Y M+ C ++ A
Sbjct: 1108 FQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAV 1167
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
Q+M G PD Y +L+ C+E L A++L+D M G S T L ++
Sbjct: 1168 KFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEY 1227
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
+ + A+ + + +K T +L+ LC E + A F+K ++ +V + R
Sbjct: 1228 CKTEDFASAMVILERLNKKLW---IRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDR 1284
Query: 541 SILSTF 546
L+ F
Sbjct: 1285 VTLAAF 1290
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 164/346 (47%), Gaps = 6/346 (1%)
Query: 213 DEVRKRENSMINGSVIAVLIIHGF-----CKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
D V N M+ + +G+ C+ +R EEA V + + C P+ +Y I+
Sbjct: 34 DHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSIL 93
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
V E +L + G P Y + GL ++ EA +L +V
Sbjct: 94 IAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGC 153
Query: 328 TIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
D V N LI S D A F M+EKG +PT+ T ++L ++ + +
Sbjct: 154 PPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQS 213
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
++K + ++ ++N ++ C G + EA+ + EM+ G PDV YN+LM C
Sbjct: 214 LFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMC 273
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ A++L +M SG ++ +YNILI +S+ G ++ A++LF+ + + G+ PDA
Sbjct: 274 SKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAF 333
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+Y+++++ LC+ + AAF VF + + +++ +I LCR
Sbjct: 334 SYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCR 379
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 203/488 (41%), Gaps = 77/488 (15%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
+ FF WA Q ++ H LSY+ +L+ L+ S + + + + ++ Y +++
Sbjct: 1 MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLR 60
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
SL Q + ++A SV F M+ +G
Sbjct: 61 SLCQAQRFEEARSV-----------------------------------FRGMAAQGCSP 85
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEV---RKRENSMINGSVIAVLIIHGFCKGKRVEE 244
+ + + I C K+ + +L+E+ + N + GS+++ G CK +++E
Sbjct: 86 NVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLS-----GLCKMGKLKE 140
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A + + R C PD + Y ++ + F G + E + ++ + G P Y +
Sbjct: 141 AVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLS 200
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT 364
G R+ G+F G V S+ F M+ +G VP
Sbjct: 201 GF--SRK-------------GEF-----------GRVQSL--------FKDMLRQGCVPN 226
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
+ T +NL CK E ++ + + D+ SYN ++ +C+ G+ EA +++
Sbjct: 227 IFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLR 286
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
EM R G+ PD+ YN L++ + L A KL+ ++ SG + +Y+ +I G
Sbjct: 287 EMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAG 346
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILS 544
++ A +F +M+ G APDA L+ GLC+ L + E+F V + + +
Sbjct: 347 KVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYN 406
Query: 545 TFMISLCR 552
M LC+
Sbjct: 407 LLMYKLCK 414
>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 208/457 (45%), Gaps = 13/457 (2%)
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE---ICNSL 160
D+++ V+ K+ ++ V F++ L++G S+F+++K + GP S+
Sbjct: 161 DALVTYVEAKKVGVELQVCNFLLKGLVEGNQIMYVRSLFDDMKIS----GPSPNIYSYSV 216
Query: 161 LAVLASDGY---IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
L + + G ++ A ++ EM GV + +G +++ C ++ + L + +
Sbjct: 217 LMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQ 276
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R + AV IHGFC +V +A +V D ++ PD +Y I+ + G V
Sbjct: 277 RGYPCNSYCFNAV--IHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDV 334
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+L + + G+ P Y + GL R+ A EL + + F D V + +
Sbjct: 335 LTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIV 394
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ G +D +N M+ VP S+L C+ + E +EV++++ +
Sbjct: 395 LHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGI 454
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ + ++V G + EA+ + ++++ G+ P++ Y ++ C+ +
Sbjct: 455 CPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWG 514
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
++ M G + Y+I+I F + +++ A RL++ M+++G P+ TYTSL+ GLC
Sbjct: 515 IFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLC 574
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ L +F + + R + ++ + C+R
Sbjct: 575 HDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKR 611
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/440 (20%), Positives = 199/440 (45%), Gaps = 23/440 (5%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
Q + + +++++ Q++ V +K D Y ++ L + +
Sbjct: 276 QRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVL 335
Query: 137 KAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+ + E+ N I P + + SLL L G ++ A ++F + +G + I + +
Sbjct: 336 TGYYMLVEMARN--GITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSI 393
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
+ C++ L + +++ ++ + + +I+ +C+ ++++EA +V + +
Sbjct: 394 VLHGCCQHLDLEICYDLWNDMV--HHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMIC 451
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
P+ + I+ F G + E + L K R+ GV P YR I GL C+
Sbjct: 452 DGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGL------CK 505
Query: 315 AKELGEVIVSGKFT-------IDDDVLNALI--GSVSSIDPRSAIVFFNFMIEKGRVPTL 365
+ +V G F + D VL ++I G V ++D + A + M+++G P +
Sbjct: 506 VNKPNDVW--GIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNI 563
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
T ++L LC +K E++ ++K + D Y +++ C ++ A + +E
Sbjct: 564 FTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFRE 623
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M+ +GL D Y L+ + + A+ ++M G + + TY LI + ++G+
Sbjct: 624 METEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGD 683
Query: 486 IEGALRLFHNMLEKGVAPDA 505
+ A+ ++++ML+ G+APDA
Sbjct: 684 EKKAMVMYNSMLQAGIAPDA 703
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 194/447 (43%), Gaps = 27/447 (6%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS-----L 160
+L +++V + +++ Y + L + K + A+ N ++ C+ P CNS +
Sbjct: 235 LLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAW---NFLQMLCQRGYP--CNSYCFNAV 289
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
+ DG + A+++FD M G + + + C+ + ML E+ + N
Sbjct: 290 IHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMAR--N 347
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV--F 278
+ V ++HG C+ RVE AF++ L+ + K D I Y IV L G
Sbjct: 348 GITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIV-----LHGCCQHL 402
Query: 279 EREVVLKKKRKL---GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ E+ + P +Y I R++ EA E+ E+++ +
Sbjct: 403 DLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCT 462
Query: 336 ALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
L+ S+ A +F + + + G VP L T + LCK NK +++ ++ +
Sbjct: 463 ILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKR 522
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
Y D Y++++ + L+EA+ + +M +G P++ Y SL+ C +D L
Sbjct: 523 GYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEV 582
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
L+ M G + + Y LI+ + + ++ AL +F M +G++ D+ YT L+ G
Sbjct: 583 MTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGG 642
Query: 515 LCQETNLQAAF----EVFNKSVNHDVM 537
+ + A E+ NK + V+
Sbjct: 643 FSKVLAMDGAQLFMEEMMNKGLTPTVV 669
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 114/502 (22%), Positives = 234/502 (46%), Gaps = 38/502 (7%)
Query: 78 PNFTHSPLSY----HSILKSLSLSRQINAIDSVLKQVKVNKI----TLDS---------S 120
PNF H+ LS H +++S LS + + ++++ V+++ +LDS S
Sbjct: 107 PNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDS 166
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
V+ +I + +Q + ++A F ++ + + CN+L+ L G+++ A ++ E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
S GV + + + C++ K+ +V + L +V+ E + V +I +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ--EKGVYPDIVTYNTLISAYSSKG 284
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+EEAF++++ + + P Y V G + V + + G++P + YR
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTID---DDVLNALI--GSVSSIDPRS-----AI 350
++ EA + G+V+ + K D DV+ L+ S+ S+ RS A+
Sbjct: 345 SLLM---------EACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
++FN + E G +P + L + C++ + + + D+ +YN ++ L
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C L EA + EM + L PD L++ C+ L+ A +L+ +M ++
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TYN L+ F +VG+I+ A ++ +M+ K + P +Y+ L+ LC + +L AF V+++
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 531 SVNHDVMLARSILSTFMISLCR 552
++ ++ I ++ + CR
Sbjct: 576 MISKNIKPTVMICNSMIKGYCR 597
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/465 (20%), Positives = 216/465 (46%), Gaps = 20/465 (4%)
Query: 56 INPYLLTHHSLALGF---------FNWASQQPNFTHSP--LSYHSILKSLSLSRQINAID 104
+ P ++T+++L + F + P SP +Y++++ L +
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK 325
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE-IC-NSLLA 162
V ++ + ++ DS+ YR ++ + + + VF++++ D+ P+ +C +S+++
Sbjct: 326 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR--SRDVVPDLVCFSSMMS 383
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
+ G +D AL F+ + G+ + + + I +C + +++ +E+ ++ +M
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
V I+HG CK K + EA K+ +E+ R PD I+ + +G++
Sbjct: 444 --DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+ +K ++ + Y + G I AKE+ +VS + + L+ ++
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 343 SIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
S + A ++ MI K PT+ +++ K C+ + + + + + + D
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRK--GLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
SYN ++ + +A+G++++M+ + GL PDV YNS++ CR++ ++ A+ +
Sbjct: 622 SYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 681
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
+M G + + TY +I+ F + A R+ ML++G +PD
Sbjct: 682 KMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 128/284 (45%), Gaps = 38/284 (13%)
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID------------PRSAI------- 350
R++ EA E ++ S FT+ D NALIGS+ I RS +
Sbjct: 179 RKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTL 238
Query: 351 -----------------VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
F + + EKG P + T + L + +E E+ +
Sbjct: 239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG 298
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS-LMEACCREDLLR 452
+ + +YN +++ LC G+ A V EM R GL PD + Y S LMEAC + D++
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE 358
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
+K++ M + +L ++ ++S F+ G ++ AL F+++ E G+ PD YT L+
Sbjct: 359 -TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+G C++ + A + N+ + + +T + LC+R ++
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%)
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L + + K E E + +L + + +++ N ++ L G + A+GV QE+ R G
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+ +V N ++ A C++ + Q+ G ++ TYN LIS +S G +E A
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
L + M KG +P TY +++ GLC+ + A EVF + + + + + ++
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 551 CRR 553
C++
Sbjct: 351 CKK 353
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/390 (18%), Positives = 146/390 (37%), Gaps = 40/390 (10%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y S+L + + V ++ + D + ++ + N KA FN V
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
K I L+ G I A+ + +EM +G + + + C+ L
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
G+ + +E+ +R ++ S ++I G CK ++ A ++ +++ + + D + Y
Sbjct: 462 GEADKLFNEMTER--ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + F +G + + + + P Y + L + + EA + + ++S
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK 579
Query: 326 KFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVP---TLSTL-------SNLSK- 373
+ N++I G S + F MI +G VP + +TL N+SK
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKA 639
Query: 374 --------------------------NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
C++N+ E V + + D +Y M+
Sbjct: 640 FGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMI 699
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ + L EA+ + EM ++G PD F
Sbjct: 700 NGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/477 (21%), Positives = 223/477 (46%), Gaps = 15/477 (3%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
++ ++K L + + K V K T D + ++ +L++ ++AF +F +
Sbjct: 68 HNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMH 127
Query: 147 FNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + + P + +++ L DG +D A+++ D M+ G + I + V + C+ +
Sbjct: 128 TSSQCL-PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGR 186
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE-CKPDFIA 263
+ ++L E+ +R ++ +++G CK +R++EA +++ +L IR C P +
Sbjct: 187 TDKGFTLLQEMTRR--GFQPDVIMYNTLLNGLCKSRRLDEALELV-QLMIRSGCYPTVVT 243
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + E F V +++ + G P +Y I GL + R+ +A+ L + +V
Sbjct: 244 YNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMV 303
Query: 324 SGKFTIDDDVLNALIGSVSS---IDP----RSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+ + D + +I + +D +A M + G P T + + + LC
Sbjct: 304 AARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLC 363
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+ KS + + + + + ++ D+ S+++++ LC S L AY + M + P+
Sbjct: 364 RARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPV 423
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
Y +L++ + + A ++++ M S G + TYN ++ VG IE A+R+ M
Sbjct: 424 AYAALIDGLSKGGEVDKAVRVFELMVESFRPG-VATYNSVLDGLCGVGRIEEAVRMVEGM 482
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ K PD +Y +L+ GLC+ + ++ A+E+F + + + + LC++
Sbjct: 483 IHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKK 539
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 152/349 (43%), Gaps = 42/349 (12%)
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
GQ + + E R N GS +IHG CK ++++A+++LDE+R R
Sbjct: 15 GQAVQLFREERCVPNEFTYGS-----LIHGLCKAGKLDQAYELLDEMRDR---------- 59
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
G+ P + I GL R +A + +
Sbjct: 60 -------------------------GIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGT 94
Query: 326 KFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGR-VPTLSTLSNLSKNLCKRNKSDE 383
K T D N L+ + V S A F M + +P + T + + LCK K D
Sbjct: 95 KCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDR 154
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+E+ +++ ++ +Y+V+V LC +GR + + ++QEM R+G PDV YN+L+
Sbjct: 155 AIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLN 214
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C+ L A +L M SGC + TYN L+ F +++ A RL M E+G P
Sbjct: 215 GLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPP 274
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
D Y +++ GLC++ L A + + V + ST + LC+
Sbjct: 275 DVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCK 323
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 157/371 (42%), Gaps = 40/371 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L +L G A+++F E EF+ +G I C+ KL Q +LDE+R
Sbjct: 2 NCALNLLVRAGQHGQAVQLFREERCVPNEFT---YGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R + G + +I G CK R +A + +C PD I + I+ + G V
Sbjct: 59 R--GIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRV 116
Query: 278 FER-EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
E ++ P Y I GL + ++ A EL
Sbjct: 117 EEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIEL------------------ 158
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ M E G P + T S L + LCK ++D+ + + ++ +
Sbjct: 159 ----------------LDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGF 202
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ YN +++ LC S RL EA ++Q M R G P V YNSLME CR + A +
Sbjct: 203 QPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFR 262
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L M GC ++ YN +I+ ++ A L M+ PD TY+++++GLC
Sbjct: 263 LIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLC 322
Query: 517 QETNLQAAFEV 527
++ + A +++
Sbjct: 323 KDWRVDADWKL 333
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 182/416 (43%), Gaps = 12/416 (2%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
Y +I L + +A+ + +E++ G + N ++ L G +AL F ++
Sbjct: 33 YGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVA 92
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
I F + + ++ ++ + + + + + N V +I+G CK +
Sbjct: 93 GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPN-VVTYTTVINGLCKDGK 151
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
++ A ++LD + C P+ I Y ++ E G + +L++ + G P Y
Sbjct: 152 LDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNT 211
Query: 302 FILGLIVERRICEAKELGEVIV-SGKF--TIDDDVLNALIGSVSSIDPRSAIVFFNFMIE 358
+ GL RR+ EA EL ++++ SG + + + L L +D A M E
Sbjct: 212 LLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVD--RAFRLIQVMSE 269
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR--- 415
+G P + + + LC+ + D+ + K + A D+ +Y+ ++ LC R
Sbjct: 270 RGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDA 329
Query: 416 ---LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
L A +++ MK+ G P+ Y ++E CR + A L +M S +L +
Sbjct: 330 DWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSS 389
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++++I + +++ A ++F M E+ P+ Y +L++GL + + A VF
Sbjct: 390 FSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF 445
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/251 (16%), Positives = 108/251 (43%), Gaps = 13/251 (5%)
Query: 85 LSYHSILKSLSLSRQINA------IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
++Y +I+ L +++A +L+ +K ++ Y +I L + + +Q+A
Sbjct: 312 ITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQA 371
Query: 139 FSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
++ + + ++ P++ + ++ L +D A K+F MS R + + + + I
Sbjct: 372 LALLRRMIDS--EVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALI 429
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
+ ++ + + + + + + S G ++ G C R+EEA ++++ + +E
Sbjct: 430 DGLSKGGEVDKAVRVFELMVE---SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKE 486
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C PD +Y + + V E + + G A Y + L ++R+ +A
Sbjct: 487 CFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAH 546
Query: 317 ELGEVIVSGKF 327
+ ++ +
Sbjct: 547 GVANKLIEAGY 557
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 210/438 (47%), Gaps = 20/438 (4%)
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMS 181
F++ SL++ +K++ VF ++ + + P++ ++ + G +++A+++F +M
Sbjct: 217 FLLSSLVKANELEKSYWVFETMR---QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDME 273
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI-----IHGF 236
GV + + + I C++ L DE + + M+ V A LI I+G
Sbjct: 274 KLGVSPNVVTYNNLIHGLCKHGNL-------DEAFRFKEKMVKDGVNATLITYSVLINGL 326
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
K ++ EA VL E + P+ + Y + + + MG++ + + G+ P +
Sbjct: 327 MKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNS 386
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFN 354
I G ++ +A+ + E ++S F+I+ +I + ++ R SA+ F
Sbjct: 387 VTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLC-MNSRFESALRFLR 445
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+ + P L+ L LCK K + VE++ L + ++ + N ++ LC +G
Sbjct: 446 EMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTG 505
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
++EA ++++M +G D YN+L+ CC+E + KL +M G + TYN
Sbjct: 506 NMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYN 565
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
+LI +G+++ A+ L++ + + P+ TY +++G C+ ++ ++F + +
Sbjct: 566 LLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ 625
Query: 535 DVMLARSILSTFMISLCR 552
++ L + +T + + CR
Sbjct: 626 NLELNSVVYNTLIRAYCR 643
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 193/436 (44%), Gaps = 17/436 (3%)
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEIC--NSLLAVLASDGYI 170
++ D ++ I + +G + A +F F+ E +G P + N+L+ L G +
Sbjct: 242 VSPDVYLFSTAINAFCKGGKVEDAIQLF----FDMEKLGVSPNVVTYNNLIHGLCKHGNL 297
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D A + ++M GV + I + V I + K + S+L E E V+
Sbjct: 298 DEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETL--EKGFTPNEVVYN 355
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I G+CK + +A ++ ++ + P+ + + + F +G + + E +L++
Sbjct: 356 TLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSR 415
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
G + + I L + R A ++ +D +L L+G + S
Sbjct: 416 GFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDA 475
Query: 351 VFFNF-MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
V F ++EKG L T + L LCK E V + K + + D +YN ++S
Sbjct: 476 VELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISG 535
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
C G++ E + + EM ++G++PD YN L+ CR L A LW++ + N
Sbjct: 536 CCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPN 595
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ TY ++I + + +IE +LF +L + + ++ Y +L+ C+ N AF++
Sbjct: 596 VYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL-- 653
Query: 530 KSVNHDVMLARSILST 545
HD M ++ I T
Sbjct: 654 ----HDDMRSKGIPPT 665
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 182/430 (42%), Gaps = 6/430 (1%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
Y +I L++ + +A SV E + N+L+ G + +AL++ +M
Sbjct: 318 TYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDM 377
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
+G+ +++ I FC+ ++ Q +L+E+ R S+ G+ IIH C
Sbjct: 378 VSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTT--IIHWLCMNS 435
Query: 241 RVEEAFKVLDELRIRECKP-DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
R E A + L E+ +R +P D + +V K E+ + K G
Sbjct: 436 RFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK-GFGANLVTT 494
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIE 358
I GL + EA L + ++ F +D N LI G M++
Sbjct: 495 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 554
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
+G P T + L +C+ K DE V ++ + D ++ +Y VM+ C + ++ E
Sbjct: 555 QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 614
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
+ E+ + L+ + YN+L+ A CR A KL D M + G TY+ LI
Sbjct: 615 GEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIH 674
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+G +E A L M ++G+ P+ YT+L+ G C+ + V + ++D+
Sbjct: 675 GMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIH- 733
Query: 539 ARSILSTFMI 548
I T MI
Sbjct: 734 PNKITYTVMI 743
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/480 (22%), Positives = 194/480 (40%), Gaps = 40/480 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++ L + N +SVLK+ T + VY +I + N A + +
Sbjct: 317 ITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGD 376
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + NS++ G ++ A + +EM RG + F I C N++
Sbjct: 377 MVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSR 436
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L L E+ R N N ++ L+ G CK + +A ++ L + + +
Sbjct: 437 FESALRFLREMLLR-NMRPNDGLLTTLV-GGLCKEGKHSDAVELWFRLLEKGFGANLVTT 494
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIV 323
+ G++ E +LKK + G Y I G E ++ E +L GE++
Sbjct: 495 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 554
Query: 324 SGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
G D N LI + I A+ +N + VP + T + CK +K +
Sbjct: 555 QG-IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIE 613
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E +++ L + + YN ++ C +G EA+ + +M+ KG+ P + Y+SL+
Sbjct: 614 EGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLI 673
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLK------------------------------- 471
C + AK L D+M G N+
Sbjct: 674 HGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIH 733
Query: 472 ----TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
TY ++I +S+ G+++ A +L H M+ KG+ PD TY L G C+E ++ F++
Sbjct: 734 PNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKI 793
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/438 (19%), Positives = 189/438 (43%), Gaps = 3/438 (0%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++ +SI++ Q+ + +L+++ +++ + II L + A E
Sbjct: 387 VTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLRE 446
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + +L+ L +G +A++++ + +G + + I C+
Sbjct: 447 MLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGN 506
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ + + +L ++ +R + + +I G CK +VEE FK+ E+ + +PD Y
Sbjct: 507 MQEAVRLLKKMLER--GFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTY 564
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
++ +G + E + + + + P Y I G +I E ++L +++
Sbjct: 565 NLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLT 624
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
++ V N LI + + A + M KG PT +T S+L +C + ++
Sbjct: 625 QNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMED 684
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ + ++ Y ++ C G++ + V+QEM + P+ Y +++
Sbjct: 685 AKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMID 744
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+ ++ A KL +M G + TYN+L + F + G+IE ++ M ++G+
Sbjct: 745 GYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPL 804
Query: 504 DATTYTSLLEGLCQETNL 521
D TYT+L+ G Q + L
Sbjct: 805 DEITYTTLVHGWQQPSAL 822
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 105/204 (51%), Gaps = 5/204 (2%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
R+AI F F+ KG PT+ T + L +L K N+ ++ V++ + D+ ++
Sbjct: 194 RNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQG-VSPDVYLFSTA 252
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
++ C G++ +A + +M++ G+ P+V YN+L+ C+ L A + ++M G
Sbjct: 253 INAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGV 312
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF- 525
+ L TY++LI+ ++ + A + LEKG P+ Y +L++G C+ NL A
Sbjct: 313 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR 372
Query: 526 ---EVFNKSVNHDVMLARSILSTF 546
++ +K +N + + SI+ F
Sbjct: 373 IRGDMVSKGINPNSVTLNSIIQGF 396
>gi|125539212|gb|EAY85607.1| hypothetical protein OsI_06979 [Oryza sativa Indica Group]
Length = 538
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 193/420 (45%), Gaps = 16/420 (3%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG-----PEI-C-NSLLAVLASDGYIDNAL 174
Y + +L + + +VF+E+K+ D G P + C N+L+ LA G AL
Sbjct: 55 YNVAMKALALAGDVDEVVAVFSELKWTAADGGDGGAPPNVLCYNTLVNALAEAGREGEAL 114
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIH 234
K FDEM GV + + I ++ ++ + + ++IA
Sbjct: 115 KAFDEMLASGVAPNASSQNILIKMHARRSEFDLAWELIHKSGVEPDVGTYSTLIA----- 169
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
G C+ +V EA+ VLD + + C+P Y + + + G + E ++++ + +LG P
Sbjct: 170 GLCRAGKVVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLP 229
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFF 353
Y I L + + E +++ + + N + G + A+
Sbjct: 230 NVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELL 289
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
+ M+ +G PT T S L LC ++ + + + + + ++ + +YN ++S LC
Sbjct: 290 DVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEM 349
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G+ R ++ +M +KG++P+ +N L+ + C AK L + + G + N+ TY
Sbjct: 350 GKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSL---IHSQGFAANVVTY 406
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
NIL+ F G++ A RL M EK +APD TYT +++GLC+E AA F KS+
Sbjct: 407 NILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFDAATACFLKSLT 466
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F+ M+ G P S+ + L K +R++ D ++++ + D+ +Y+ +++
Sbjct: 113 ALKAFDEMLASGVAPNASSQNILIKMHARRSEFDL---AWELIHKSGVEPDVGTYSTLIA 169
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC +G++ EA+GV+ M K P V Y +++A CR+ + AK L +M GC
Sbjct: 170 GLCRAGKVVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLP 229
Query: 469 NLKTYNILI------SKFSEV-----------------------------GEIEGALRLF 493
N+ TYN+LI KF EV G+ + AL L
Sbjct: 230 NVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELL 289
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
ML +G+ P A T++ LL LC + L A + +S +T M SLC
Sbjct: 290 DVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLC 347
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 81/196 (41%), Gaps = 3/196 (1%)
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+ G P + + L L + + E ++ + + A+ + S N+++
Sbjct: 87 DGGAPPNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFD 146
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
A+ +I + G++PDV Y++L+ CR + A + D M C ++TY ++
Sbjct: 147 LAWELIH---KSGVEPDVGTYSTLIAGLCRAGKVVEAWGVLDWMLEKNCRPMVQTYTPIV 203
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ G I A L M G P+ TY L+ LC + +V +S D
Sbjct: 204 QAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWK 263
Query: 538 LARSILSTFMISLCRR 553
+ + +M LC++
Sbjct: 264 PSTVTYNIYMNGLCKK 279
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 131/571 (22%), Positives = 234/571 (40%), Gaps = 68/571 (11%)
Query: 5 PATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSP-SLVARVINPYLLTH 63
P+ D ++ S+ N T T+ QL + S + + NP L
Sbjct: 19 PSLDPKLNNTKTPFSSPNSTYTTPNSHTFDTPTISQLIAKQHWSKLKTIVKETNPSSLLQ 78
Query: 64 H--------SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKI 115
H L L +F W ++ H+ + +L L+ ++ N I ++L N
Sbjct: 79 HLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAH 138
Query: 116 TLDSSVYR-----------------FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN 158
+S+++ ++ + ++ A F+ + CN
Sbjct: 139 YSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCN 198
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK- 217
+L L +G I ++ EM R + + + F V I C+ K + ++++++
Sbjct: 199 PMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAW 258
Query: 218 -------RENSMINGSVIAV-------------------------LIIHGFCKGKRVEEA 245
N++I+G A ++I GFC+ + V A
Sbjct: 259 GFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAA 318
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
KV +E++ + +P+ + Y + G + E + K +G+ P Y I G
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALING 378
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVL--NALI---GSVSSIDPRSAIVFFNFMIEKG 360
++ + EA+E+ + I GK + +V+ N LI G +D A + + M++ G
Sbjct: 379 FCKKKMLKEAREMLDDI--GKRGLAPNVITFNTLIDAYGKAGRMD--DAFLLRSMMLDTG 434
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P +ST + L C+ E ++ K + N D+ +YN++V LC G R+A
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAV 494
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
++ EM GL+P YN+L++ RE A + M G N+ TYN+LI F
Sbjct: 495 RLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGF 554
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
G++E A RL + MLEKG+ P+ TTY L
Sbjct: 555 CNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 585
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 205/473 (43%), Gaps = 45/473 (9%)
Query: 66 LALGFFNWASQ-QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
LAL F +A + P FTH+ +YHSIL LS +R + ++S++ ++ + + F
Sbjct: 64 LALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLF 123
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE----ICNSLLAVLASDGYIDNALKMFDEM 180
I L++ + + D G + N+LL VL + D MF
Sbjct: 124 I--DLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNS 181
Query: 181 SHR-GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
G+ + + + C+ + +LDE+ ++ V I+ G+
Sbjct: 182 KESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSM--GLVPNLVTYTTILGGYVAR 239
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+E A +VL+E+ R PD Y ++ + + +G E V+ K + P
Sbjct: 240 GDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPN---- 295
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
E G+++ R +C+ K+ GE A F+ M+E+
Sbjct: 296 -EVTYGVMI-RALCKEKKSGE----------------------------ARNMFDEMLER 325
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
+P S + LC+ +K DE +++ + N+ D + ++ +LC GR+ EA
Sbjct: 326 SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEA 385
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ E + KG P + YN+L+ C + L A +LWD M+ C N TYN+LI
Sbjct: 386 RKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEG 444
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
S+ G ++ +R+ MLE G P+ TT+ L EGL + + A ++ + +V
Sbjct: 445 LSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAV 497
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 91/193 (47%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P + T + L K LCK+N + +V + + ++ +Y ++ G + A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
V++EM +G PD + Y LM+ C+ A + D M + N TY ++I
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ + A +F MLE+ PD++ +++ LC++ + A ++ K + ++ M
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 365
Query: 540 RSILSTFMISLCR 552
++LST + LC+
Sbjct: 366 NALLSTLIHWLCK 378
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 192/421 (45%), Gaps = 4/421 (0%)
Query: 119 SSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLL-AVLASDGYIDNALKMF 177
SSV+ ++ S + KA S+ + + + G N++L A + S I A +F
Sbjct: 134 SSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFC 237
EM V + + + I FC L L D + K+ + V +I G+C
Sbjct: 194 KEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKK--GCLPNVVTYNTLIDGYC 251
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K +++++ F++L + ++ +P+ I+Y +V G + E VL + K G +
Sbjct: 252 KLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEV 311
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFM 356
Y I G E +A + ++ + +LI S+ + A F + M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQM 371
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
+G P T + L ++ +E V K + N + + +YN +++ C +G++
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKM 431
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
+A V+++MK KGL PDV Y++++ CR + A ++ +M A G + TY+ L
Sbjct: 432 VDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSL 491
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I F E + A LF ML G+ PD TYT+L+ C E +LQ A ++ N+ V V
Sbjct: 492 IQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGV 551
Query: 537 M 537
+
Sbjct: 552 L 552
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 125/522 (23%), Positives = 224/522 (42%), Gaps = 66/522 (12%)
Query: 75 SQQPNFTHSPLSYHSILKSLSLS-RQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
SQ F LSY+++L + S R I+ ++V K++ ++++ + Y +I
Sbjct: 160 SQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAG 219
Query: 134 NTQKAFSVFNEV-KFNCEDIGPEIC--NSLLAVLASDGY-----IDNALKMFDEMSHRGV 185
N A F+ + K C P + N+L+ DGY ID+ ++ M+ +G+
Sbjct: 220 NLDVALRFFDRMEKKGCL---PNVVTYNTLI-----DGYCKLRKIDDGFELLRSMALKGL 271
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE--------NSMING------------ 225
E + I + V I C ++ ++ +L E+ KR N++I G
Sbjct: 272 EPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALV 331
Query: 226 ------------SVIAVL-IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
SVI +IH CK + A + LD++R+R P+ Y + + F
Sbjct: 332 MHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD- 331
G + E VLK+ G +P Y I G + ++ +A + E + T D
Sbjct: 392 QKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVV 451
Query: 332 DVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
L G S D A+ M+ KG P T S+L + C++ ++ E +++ +
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEM 511
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
D +Y +++ C G L++A + EM KG+ PDV Y+ L+ ++
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQART 571
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEV---------------GEIEGALRLFHNM 496
R AK+L ++F + TY+ LI S + G + A ++F +M
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
LEK PD T Y ++ G C+ +++ A+ ++ + V +L
Sbjct: 632 LEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLL 673
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 199/473 (42%), Gaps = 32/473 (6%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PN +SY+ ++ L ++ I VL ++ +LD Y +I + N
Sbjct: 272 EPNL----ISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 137 KAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+A + E+ + + P + SL+ + G ++ A + D+M RG+ + +
Sbjct: 328 QALVMHAEMLRH--GLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTT 385
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
+ F + + + +L E+ +N V +I+G C ++ +A VL++++
Sbjct: 386 LVDGFSQKGYMNEAYRVLKEMI--DNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKE 443
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL---GVAPRTNDYREFILGLIVERR 311
+ PD ++Y V F ++ + L+ KRK+ G+ P T Y I G +RR
Sbjct: 444 KGLTPDVVSYSTVLSGF---CRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRR 500
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
EA +L + ++ D+ ALI + D + AI N M+EKG +P + T S
Sbjct: 501 TKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSV 560
Query: 371 LSKNLCKRNKSDELVEV---------------YKVLSANDYFTDMESYNVMVSFLCTSGR 415
L L K+ ++ E + Y L N + +S ++ C G
Sbjct: 561 LINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ EA V + M K PD + YN ++ CR +R A L+ +M SG + T
Sbjct: 621 MTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIA 680
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
L+ + G++ + N+L +A L+E +E N+ +V
Sbjct: 681 LVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVL 733
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 131/378 (34%), Gaps = 84/378 (22%)
Query: 226 SVIAVLIIHGFCKG---------------KRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
S++ + HGF G + + A V E+ + P+ Y I+
Sbjct: 155 SIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRG 214
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
F L G++ + K G P Y I G R+I + EL
Sbjct: 215 FCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFEL------------ 262
Query: 331 DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
M KG P L + + + LC+ + E+ V
Sbjct: 263 ----------------------LRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTE 300
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
++ Y D +YN ++ C G +A + EM R GL P V Y SL+ + C+
Sbjct: 301 MNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGN 360
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML------------- 497
+ A + DQM G N +TY L+ FS+ G + A R+ M+
Sbjct: 361 MNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNA 420
Query: 498 ----------------------EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
EKG+ PD +Y+++L G C+ ++ A V K V
Sbjct: 421 LINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKG 480
Query: 536 VMLARSILSTFMISLCRR 553
+ S+ + C +
Sbjct: 481 IKPDTITYSSLIQGFCEQ 498
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 198/460 (43%), Gaps = 41/460 (8%)
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLA---SDGYIDNALKMFDEMSHRGVEFSTIGF 192
+A +FN +K CN+LL L S I + +F + GV+ +T F
Sbjct: 141 HQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSF 200
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
+ I C + G+ + +L ++R + ++ I+ G CK R+ EA +L ++
Sbjct: 201 NILIHGSCMENRFGEAIRVLGKMR--DYGCPPDNITYNTILDGLCKKGRLNEARDLLLDM 258
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
+ + P+ + I+ +G + E V++ + V P Y I G + RI
Sbjct: 259 KNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRI 318
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
EA L E + + K + D N LI G M +G P T + +
Sbjct: 319 AEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVM 378
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
K K+ K DE+ + + + + D+ +YN ++S+ C G++ EA+ ++ EM RKGL
Sbjct: 379 VKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGL 438
Query: 432 DPDVSFYNSLMEACCRE-------DLLRPAKK---------------------------- 456
D N+++ A CRE DLL A++
Sbjct: 439 KMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALR 498
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
LWD+M ++ TYN +I+ ++G+ A+ +LE G+ PD TY +++ G C
Sbjct: 499 LWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYC 558
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
QE ++ AF+ NK V + +T + LC+ ++
Sbjct: 559 QEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGML 598
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 180/398 (45%), Gaps = 7/398 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N++L L G ++ A + +M ++G+ + F + + C L + ++++ +
Sbjct: 236 NTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMS- 294
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+NS++ + ++I GFCK R+ EA ++ +E+ + PD + Y + GS
Sbjct: 295 -QNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSS 353
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E ++++ G+ P + Y + + + ++ E + + D N L
Sbjct: 354 EEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTL 413
Query: 338 IG---SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
I V +D A + M KG TL+ + + LC+ K DE ++
Sbjct: 414 ISWHCKVGKMD--EAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRR 471
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
YF D SY ++ + +A + EMK K + P + YNS++ C+ A
Sbjct: 472 GYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQA 531
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
D++ SG + TYN +I + + G++E A + + M+EK PD T +LL G
Sbjct: 532 IDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCG 591
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
LC+E L+ A ++FN ++ + +T ++SLC+
Sbjct: 592 LCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCK 629
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 169/400 (42%), Gaps = 40/400 (10%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G++ A + + MS V + V I FC+ ++ + + + +E+ EN ++ V
Sbjct: 281 GWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEM---ENLKLSPDV 337
Query: 228 IAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
+ +I+G + EE FK+++E+ R KP+ + Y ++ + F G + E + ++K
Sbjct: 338 VTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRK 397
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL--------- 337
+ G P Y I ++ EA L + + +DD LN +
Sbjct: 398 MEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERK 457
Query: 338 ---------------------------IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
IG A+ ++ M EK +P++ T ++
Sbjct: 458 LDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNS 517
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
+ LC+ K+++ ++ L + D +YN ++ C G++ +A+ +M K
Sbjct: 518 MIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKN 577
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
PDV N+L+ C+E +L A KL++ + G + +YN +I + A
Sbjct: 578 FKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAF 637
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
L M EK + PD TY ++L GL ++ A E +K
Sbjct: 638 DLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISK 677
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 148/361 (40%), Gaps = 48/361 (13%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L++ G +D A ++ DEM +G++ + + C KL + +L R+
Sbjct: 411 NTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARR 470
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R ++ LII G+ K ++ +A ++ DE++ +E P I Y + MG
Sbjct: 471 R-GYFVDEVSYGTLII-GYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKT 528
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ L + + G+ P Y I G E ++
Sbjct: 529 NQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQV------------------------- 563
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
A F N M+EK P + T + L LCK ++ ++++ +
Sbjct: 564 ---------EKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKD 614
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D SYN ++ LC R EA+ +++EM+ K L PD YN+++ ++ A++
Sbjct: 615 VDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEF 674
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
++ G S N +F E+G+ + A + + + P+A Y++ + LC
Sbjct: 675 ISKIAEKGKSEN---------QFLELGKRQDART---SEIPQEPHPNAIAYSNKINELCS 722
Query: 518 E 518
+
Sbjct: 723 Q 723
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 108/258 (41%), Gaps = 48/258 (18%)
Query: 329 IDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL------------ 375
I +L+ IG+ V+ P A FN M G PTL T + L L
Sbjct: 122 ISKPLLDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLS 181
Query: 376 --------------------------CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
C N+ E + V + D +YN ++
Sbjct: 182 KAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDG 241
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC GRL EA ++ +MK KGL P+ + +N L+ CCR L+ A + + M + +
Sbjct: 242 LCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPD 301
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
TYN++IS F + G I A+RL M ++PD TY +L+ G + + + F++
Sbjct: 302 AWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIE 361
Query: 530 K---------SVNHDVML 538
+ SV ++VM+
Sbjct: 362 EMEGRGMKPNSVTYNVMV 379
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 3/152 (1%)
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR---EDLLRPAKKLWDQ 460
++ + GR +A + MKR G+ P + N+L+ A R +R +K ++
Sbjct: 128 DISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTD 187
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
G N ++NILI A+R+ M + G PD TY ++L+GLC++
Sbjct: 188 FIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGR 247
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L A ++ N + R+ + ++ CR
Sbjct: 248 LNEARDLLLDMKNKGLFPNRTTFNILVVGCCR 279
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 180/379 (47%), Gaps = 7/379 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
+ L + + G+ + + + E+ G+E + I FC ++ LS+L ++ K
Sbjct: 66 SKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILK 125
Query: 218 R--ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E S++ + + ++G C ++++ + D++ +R +P+ Y ++ G
Sbjct: 126 LGLEPSIVTFTTL----LNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSG 181
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E LK+ K+G P +Y I G + ++ EA+ + +++VS T +
Sbjct: 182 KANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYT 241
Query: 336 ALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+L+ I+ A+ + + KG VP + T + + LC+ + ++++ + A+
Sbjct: 242 SLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAH 301
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ ++ +Y V++ LC G L EA+ + QEM+R + P++ Y L+++ C+ ++
Sbjct: 302 GHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDG 361
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K+L+ ++ G N+ TY L+ + G I A +LF M E G PD Y +++G
Sbjct: 362 KELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQG 421
Query: 515 LCQETNLQAAFEVFNKSVN 533
Q + A ++ + VN
Sbjct: 422 FLQHKDPSMARQLVEEMVN 440
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 102/179 (56%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
+++ G P++ T + L LC K D+++ +Y + ++ +YNV+++ L SG+
Sbjct: 123 ILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGK 182
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
EA G +++M++ G P+V Y++L++ C + A+ ++D M + GC+ N+ TY
Sbjct: 183 ANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTS 242
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
L++ + ++ IE A++L L KG+ PD T+T+++ GLC+ AA ++F H
Sbjct: 243 LMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAH 301
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 131/275 (47%), Gaps = 1/275 (0%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
VL K KLG+ P + + GL +E ++ + L + ++ + N +I S+S
Sbjct: 119 VLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLS 178
Query: 343 -SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
S A+ F M + G VP + S L C R + DE V+ ++ + ++
Sbjct: 179 KSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVY 238
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y +++ C R+ EA ++ E RKGL PD+ + +++ CR A++L+ +
Sbjct: 239 TYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYI 298
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
A G + N+ TY +L+ + G +E A LF M V P+ YT L++ LC+ +
Sbjct: 299 CAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKI 358
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+ E+F++ ++ + + + +LC+ LI
Sbjct: 359 KDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLI 393
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 137/320 (42%), Gaps = 3/320 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
+LL L +G +D + ++D+M RG++ + + V I ++ K + L L ++ K
Sbjct: 136 TTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEK 195
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ V +I G+C +++EA V D + + C P+ Y + + + +
Sbjct: 196 V--GCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERI 253
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E +L + + G+ P + I GL R A++L I + T + L
Sbjct: 254 EEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVL 313
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ G + A F M P L + L +LCK K + E++ L
Sbjct: 314 LDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGL 373
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ +Y +V LC G + EA+ + ++M+ G PD YN +++ + A++
Sbjct: 374 KPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQ 433
Query: 457 LWDQMFASGCSGNLKTYNIL 476
L ++M G S + T +L
Sbjct: 434 LVEEMVNRGFSADAATRALL 453
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 94/208 (45%)
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
D A+ F M+ + +P + S L ++ + + +V + K + D+ S +
Sbjct: 42 DKDDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLS 101
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
++++ C R+ V+ ++ + GL+P + + +L+ C E + L+D M
Sbjct: 102 ILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVR 161
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G N+ TYN++I+ S+ G+ AL M + G P+ Y++L++G C + A
Sbjct: 162 GLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEA 221
Query: 525 FEVFNKSVNHDVMLARSILSTFMISLCR 552
VF+ V+ ++ M C+
Sbjct: 222 RSVFDLMVSKGCTPNVYTYTSLMNGYCK 249
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 162/336 (48%), Gaps = 6/336 (1%)
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
+W C + K Q + L+E+ E+ ++ + IIHG+C+ +VE+AF+ +++ +
Sbjct: 237 LW-LCRSGKTDQSIDKLNELL--ESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEK 293
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
KPD I+ G + + G A Y I GL E R EA
Sbjct: 294 SFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEA 353
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSK 373
+L + K D NA++ +++ + + A F N M+EK P L T + L +
Sbjct: 354 FDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLR 413
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK-GLD 432
LC D ++++ + D +YN ++S LC GR EA+ ++ EM+ K GL
Sbjct: 414 GLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLV 473
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
PD + YN+++ CRE + A + ++M +L T NIL+ G + AL+L
Sbjct: 474 PDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKL 533
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
F+ + KG A DA TY +++ GLC+E + AF++
Sbjct: 534 FNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLL 569
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 143/321 (44%), Gaps = 5/321 (1%)
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL--GVAPRTND 298
++ EA ++ +++ C PD +Y + + L S + + K L G+ P
Sbjct: 207 KLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQIT 266
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMI 357
Y I G E ++ +A + +V F D N L+ G + +A+ FN I
Sbjct: 267 YNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWI 326
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS-GRL 416
KG+ T + + LCK + +E ++ + D +YN ++ L + G++
Sbjct: 327 SKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQV 386
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
+A+ +M K PD+ N L+ C E +L A KL++ + G + + TYN +
Sbjct: 387 EKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTI 446
Query: 477 ISKFSEVGEIEGALRLFHNMLEK-GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
IS + G E A L M EK G+ PD TTY +++ G C+E ++ AF+ NK V
Sbjct: 447 ISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKS 506
Query: 536 VMLARSILSTFMISLCRRVLI 556
+ + LCR ++
Sbjct: 507 FKPDLFTCNILLRGLCREGML 527
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 2/153 (1%)
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVM--VSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
+NK E + + + F D SYN + V +LC SG+ ++ + E+ GL P
Sbjct: 205 KNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQ 264
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YN+++ CRE + A + ++M +L T NIL+ G ++ AL+LF+
Sbjct: 265 ITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNT 324
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ KG A DA TY +++ GLC+E + AF++
Sbjct: 325 WISKGKAIDAVTYNTIISGLCKEGRFEEAFDLL 357
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/480 (22%), Positives = 213/480 (44%), Gaps = 25/480 (5%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++++L +I +VL ++ +Y I+ + +G + A V ++
Sbjct: 161 TYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDL 220
Query: 146 KF-NCE-DIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
C D+G CN +L + G +D AL + ++ G E + + + C
Sbjct: 221 HARGCALDVGN--CNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAK 278
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ G V +++E+ R N LI + C+ E +VL ++ C PD
Sbjct: 279 RWGCVQELMEEM-VRMACPPNIVTFNTLISY-LCRNGLFERVHEVLAQMVEHGCTPDIRM 336
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + G + +L + G+ P Y + GL R E +EL +
Sbjct: 337 YATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMF 396
Query: 324 SGKFTIDDDVLNALI------GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+DD N L+ G V + I M+E G +P + T + + CK
Sbjct: 397 DKDCPLDDVTFNILVDFFCQNGLVDRV-----IELLEQMLEHGCMPDVITYTTVINGFCK 451
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
DE V + K ++A + SY +++ LC++ R +A ++ +M ++G +
Sbjct: 452 EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPIT 511
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
+N+L+ C++ L+ A +L QM +GCS +L +Y+ +I + G+ + AL L + M+
Sbjct: 512 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 571
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK----SVNHDVMLARSILSTFMISLCRR 553
KG++P+ Y+S+ L +E + ++F+ ++ D +L +++S SLC+R
Sbjct: 572 NKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVIS----SLCKR 627
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/457 (20%), Positives = 205/457 (44%), Gaps = 42/457 (9%)
Query: 78 PNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
P+F P +SY+++LK L ++++ + +++++ + + +I L +
Sbjct: 256 PSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLF 315
Query: 136 QKAFSVFNE-VKFNC-EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
++ V + V+ C DI + +++ + +G+++ A ++ + M G++ + + +
Sbjct: 316 ERVHEVLAQMVEHGCTPDI--RMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYN 373
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
+ C + + +L E+ ++ + + V +++ FC+ V+ ++L+++
Sbjct: 374 TLLKGLCSAERWEETEELLAEMFDKDCPLDD--VTFNILVDFFCQNGLVDRVIELLEQML 431
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
C PD I Y V F G + E ++LK G P T Y IV + +C
Sbjct: 432 EHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYT------IVLKGLC 485
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
A+ ++ +D+++ +I ++P + NF
Sbjct: 486 SAE---------RWVDAEDLMSQMIQQGCPLNPITFNTLINF------------------ 518
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
LCK+ ++ +E+ K + N D+ SY+ ++ L +G+ EA ++ M KG+ P
Sbjct: 519 -LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSP 577
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+ Y+S+ A RE + +++D + + + YN +IS + GE E A+
Sbjct: 578 NTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFL 637
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
M+ G P+ +TYT L+ GL E ++ A E+ +
Sbjct: 638 AYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTE 674
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 176/401 (43%), Gaps = 8/401 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++A G +++A ++ + V + + + C ++ L++LDE+ +
Sbjct: 131 NAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMPR 187
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R + I + +I+ C+G A +VL++L R C D +V GSV
Sbjct: 188 RGCAPI--PPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 245
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E +L+ G P Y + GL + +R +EL E +V + N L
Sbjct: 246 DEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 305
Query: 338 IGSV--SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
I + + + R V M+E G P + + + +CK + E+ + +
Sbjct: 306 ISYLCRNGLFERVHEVLAQ-MVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG 364
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
++ YN ++ LC++ R E ++ EM K D +N L++ C+ L+
Sbjct: 365 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVI 424
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L +QM GC ++ TY +I+ F + G I+ A+ L +M G P+ +YT +L+GL
Sbjct: 425 ELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 484
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
C A ++ ++ + L +T + LC++ L+
Sbjct: 485 CSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLV 525
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN MV+ C +G+L A + + + P+ Y ++ A C + A + D+M
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
GC+ Y++++ G A+R+ ++ +G A D +L +C + ++
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246
Query: 523 AAFEVF 528
A +
Sbjct: 247 EALHLL 252
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 174/375 (46%), Gaps = 5/375 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
++L+ L G + AL + D M G + + +G + + C K G LD RK
Sbjct: 208 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC---KSGNSALALDLFRK 264
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E I SV+ ++I CK ++A + +E+ ++ K D + Y + G
Sbjct: 265 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 324
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ +L++ + P + I + E ++ EAKEL +++ D N+
Sbjct: 325 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 384
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G A F+ M+ KG P + T S L + CK + D+ + +++ +S+
Sbjct: 385 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 444
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ +YN +V C SG+L A + QEM +G+ P V Y L++ C L A
Sbjct: 445 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 504
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+++++M S + + YNI+I +++ A LF ++ +KGV PD TY ++ GL
Sbjct: 505 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 564
Query: 516 CQETNLQAAFEVFNK 530
C++ +L A +F K
Sbjct: 565 CKKGSLSEADMLFRK 579
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 180/406 (44%), Gaps = 25/406 (6%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L + +A D L M G+E + I +C KL S+L K
Sbjct: 103 NRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWK 162
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E I S + ++GFC RV EA ++D + + +PD + + L G
Sbjct: 163 LGYEPDTITFSTL----VNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKG 218
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFI----------LGLIVERRICEAKELGEVIVSG 325
V E V++ + + G P Y + L L + R++ E + + +V
Sbjct: 219 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM-EERNIKASVVQY 277
Query: 326 KFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
ID + S D A+ FN M KG + T S+L LC K D+
Sbjct: 278 SIVIDS------LCKDGSFD--DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 329
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
++ + + + D+ +++ ++ G+L EA + EM +G+ PD YNSL++
Sbjct: 330 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 389
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+E+ L A +++D M + GC ++ TY+ILI+ + + ++ +RLF + KG+ P+
Sbjct: 390 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 449
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
TY +L+ G CQ L AA E+F + V+ V + + LC
Sbjct: 450 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 495
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 195/465 (41%), Gaps = 46/465 (9%)
Query: 51 LVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQV 110
L RV +L + GF QP+ ++Y +L L S + +++
Sbjct: 216 LKGRVSEALVLIDRMVEYGF------QPD----EVTYGPVLNRLCKSGNSALALDLFRKM 265
Query: 111 KVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYI 170
+ I Y +I SL + + A S+FNE++ +SL+ L +DG
Sbjct: 266 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 325
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D+ KM EM R + + F I F + KL + + +E+ R + ++
Sbjct: 326 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR--GIAPDTITYN 383
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I GFCK + EA ++ D + + C+PD + Y I+ + V + + ++
Sbjct: 384 SLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 443
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
G+ P T Y +LG ++ AKEL
Sbjct: 444 GLIPNTITYNTLVLGFCQSGKLNAAKEL-------------------------------- 471
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
F M+ +G P++ T L LC + ++ +E+++ + + + YN+++ +
Sbjct: 472 --FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 529
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C + ++ +A+ + + KG+ PDV YN ++ C++ L A L+ +M GC+ +
Sbjct: 530 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 589
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
TYNILI + ++ L M G + D++T +++ L
Sbjct: 590 FTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 634
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 161/362 (44%), Gaps = 9/362 (2%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL- 231
AL +F +M R ++ S + + + I C++ LS+ +E+ E I V+
Sbjct: 258 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM---EMKGIKADVVTYSS 314
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I G C + ++ K+L E+ R PD + + + + F G + E + + + G
Sbjct: 315 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 374
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS---VSSIDPRS 348
+AP T Y I G E + EA ++ +++VS D + LI S +D
Sbjct: 375 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD--D 432
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
+ F + KG +P T + L C+ K + E+++ + + + +Y +++
Sbjct: 433 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 492
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC +G L +A + ++M++ + + YN ++ C + A L+ + G
Sbjct: 493 GLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 552
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TYN++I + G + A LF M E G PD TY L+ + L ++ E+
Sbjct: 553 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELI 612
Query: 529 NK 530
+
Sbjct: 613 EE 614
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 154/326 (47%), Gaps = 7/326 (2%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I+ +C+ K++ AF VL +PD I + + F L G V E ++ + ++
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD----DVLNALIGSVSSIDP 346
P I GL ++ R+ EA L + +V F D+ VLN L S +S
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS--- 255
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A+ F M E+ ++ S + +LCK D+ + ++ + D+ +Y+ +
Sbjct: 256 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 315
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC G+ + +++EM + + PDV +++L++ +E L AK+L+++M G
Sbjct: 316 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 375
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ + TYN LI F + + A ++F M+ KG PD TY+ L+ C+ +
Sbjct: 376 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 435
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+F + + ++ +T ++ C+
Sbjct: 436 LFREISSKGLIPNTITYNTLVLGFCQ 461
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 202/469 (43%), Gaps = 38/469 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++I+ L ++ I+ + V +Q+ + D+ Y II L + ++ +A VF +
Sbjct: 331 VTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQ 390
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ N L+ S G + ++ EMS +E +G+ + C+N K
Sbjct: 391 MIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGK 450
Query: 205 LGQVLSMLDEVRKRENSMINGSV-IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ S+ D + ++ I SV I +++HG+ K + E +L+ + P+
Sbjct: 451 CNEARSLFDSMIRKG---IKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRI 507
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+ V + + E + K ++ G++P Y I L +LG V
Sbjct: 508 FNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALC---------KLGRV-- 556
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
DD VL FN MI +G P ++L LC +K ++
Sbjct: 557 ------DDAVLQ-----------------FNQMINEGVTPNNVVFNSLVYGLCTVDKWEK 593
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ E++ + D+ +N ++ LC GR+ EA +I M GL PDV YN+L++
Sbjct: 594 VEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLID 653
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C + A KL D M ++G N+ +YN L+ + + G I+ A LF ML KGV P
Sbjct: 654 GHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTP 713
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
TY ++L GL + A E++ + + + S + C+
Sbjct: 714 GVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCK 762
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 184/422 (43%), Gaps = 13/422 (3%)
Query: 134 NTQKAFSVFNEVKFNCED-IGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTI 190
+++ A S FN + +C + + P+ C ++ G ++ F + G I
Sbjct: 61 SSKLAVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDI 120
Query: 191 GFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVL 249
+ C+ ++G+ + +L +R+ V++ ++ G C +R EEA ++L
Sbjct: 121 VVNQLLKGLCDTKRVGEAMHVL--LRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELL 178
Query: 250 DEL---RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
+ + C PD ++Y IV F G V + + ++GV+P Y I GL
Sbjct: 179 HMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLF---LEMGVSPDVVTYNTIIDGL 235
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTL 365
+ + A+++ + +V ++ N +I G + + A F M++KG P+
Sbjct: 236 CKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSN 295
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
T + + LCK D V++ + D +YN ++ LC + + +A GV Q+
Sbjct: 296 VTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQ 355
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M KG+ PD Y +++ C+ + A+ ++ QM G N TYN LI + G+
Sbjct: 356 MIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQ 415
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
E ++ M + PD TY LL+ LC+ A +F+ + + + +I
Sbjct: 416 WEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGI 475
Query: 546 FM 547
+
Sbjct: 476 ML 477
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 106/458 (23%), Positives = 194/458 (42%), Gaps = 25/458 (5%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+P+ T + H K +LS + +L + N I+ + ++ +I + +
Sbjct: 467 KPSVTIYGIMLHGYGKKGALSE----MHDLLNLMVANGISPNHRIFNTVICAYAKRAMID 522
Query: 137 KAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+ +F +K + + P + +L+ L G +D+A+ F++M + GV + + F
Sbjct: 523 EVMHIF--IKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNS 580
Query: 195 FIWKFCENAKLGQV----LSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD 250
++ C K +V L ML++ + + N ++ CK RV EA +++D
Sbjct: 581 LVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFN------TVLCNLCKEGRVMEARRLID 634
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
+ KPD I+Y + + + E +L G+ P Y + G
Sbjct: 635 SMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAG 694
Query: 311 RI----CEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
RI C +E+ V+ + +LN L S + R ++ N MI+ ++ ++
Sbjct: 695 RIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARE--LYVN-MIKSRKLWSIC 751
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T S + CK N DE ++++ L + D D+ ++N+M+ L GR +A + +
Sbjct: 752 TYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAI 811
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
GL P V Y + E E L L+ M SG + N N LI K + GEI
Sbjct: 812 PANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEI 871
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
A + EK + +A+T + L+ +E Q A
Sbjct: 872 PRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHA 909
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 118/237 (49%), Gaps = 8/237 (3%)
Query: 321 VIVSGKFTIDDDVLNALIGSVSSID--PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+I+ + +DD V+N L+ + + V M E G + + + L K LC R
Sbjct: 109 LILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDR 168
Query: 379 NKSDELVEVYKVL---SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
+++E E+ ++ + D+ SYN++++ G++ +AY + EM G+ PDV
Sbjct: 169 RRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDV 225
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YN++++ C+ + A+ ++ QM G N TYN +I + E++ A +F
Sbjct: 226 VTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQK 285
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M++KGV P TY ++++GLC+ + A VF + ++ V +T + LC+
Sbjct: 286 MVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCK 342
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 135/537 (25%), Positives = 229/537 (42%), Gaps = 73/537 (13%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSY- 87
KW P E+ L L L+ + LV V+ + ++ + FF WA ++ NF H S+
Sbjct: 76 KWGPDAEKALEVLKLK--VDHRLVHEVLK--IDVEINVKIQFFKWAGKRRNFEHDSSSFM 131
Query: 88 ---HS--------------------------------ILKSLSLSRQINAIDSVLKQVKV 112
HS I+K L ++ +N SV Q+K
Sbjct: 132 ALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKAKMVNKALSVFYQIKG 191
Query: 113 NKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEIC--NSLLAVLASDG 168
K ++ Y +I L Q + +K ++NE+ C D P+ ++L++ G
Sbjct: 192 RKCKPAATTYNSMILMLKQEGHLEKVHEIYNEM---CNDGNCFPDTVTYSALISAFGKLG 248
Query: 169 YIDNALKMFDEMSHRGV----EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
+ D+A+++FDEM G+ + T G++ KL +V LD +++ ++
Sbjct: 249 HYDSAIRLFDEMKENGLYPTAKIYTTLLGIYF-------KLDKVEKALDVIKEMKDK--- 298
Query: 225 GSVIAVLI----IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
G + V I G K RV++A++V ++ CKPD + ++ ++G V
Sbjct: 299 GCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVV---LINSLINILGKVGRL 355
Query: 281 EVVLKKKRKL---GVAPRTNDYREFILGLI-VERRICEAKELGEVIVSGKFTIDDDVLNA 336
EV LK RK+ P Y I L + EA E + +
Sbjct: 356 EVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSI 415
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G + A++ M EKG P + +L +L K + + E++ L N
Sbjct: 416 LIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENC 475
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ Y VM+ GRL EA + EM++ G PDV YN+LM R ++ A+
Sbjct: 476 GHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQ 535
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
L M +GCS +L ++NI+++ + G + A+ +F M + PDA +Y ++L
Sbjct: 536 SLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVL 592
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 140/384 (36%), Gaps = 74/384 (19%)
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRV 242
R E + F I E G++ + ++ + +I+ SV I+ K K V
Sbjct: 121 RNFEHDSSSFMALIHSLDEAGFYGEMWKTIQDMVRSSTCVIS-SVYLSEIVKLLGKAKMV 179
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
+A V +++ R+CKP Y
Sbjct: 180 NKALSVFYQIKGRKCKP-----------------------------------AATTYNSM 204
Query: 303 ILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKG 360
IL L E + + E+ E+ G D +ALI + + SAI F+ M E G
Sbjct: 205 ILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENG 264
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
PT + L K +K ++ ++V K + + +Y + L +GR+ +AY
Sbjct: 265 LYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAY 324
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN------ 474
V +M + G PDV NSL+ + L KL+ +M + C N+ TYN
Sbjct: 325 RVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKAL 384
Query: 475 ------------------------------ILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
ILI F + IE AL L M EKG P
Sbjct: 385 FECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPC 444
Query: 505 ATTYTSLLEGLCQETNLQAAFEVF 528
Y SL+ L + +AA E+F
Sbjct: 445 PAAYCSLINSLGKVKRYEAANELF 468
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 92/197 (46%), Gaps = 7/197 (3%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRV--PTLSTLSNLSKNLCKRNKSDELVEVY-KVLSA 393
L+G ++ ++ VF+ KGR P +T +++ L + +++ E+Y ++ +
Sbjct: 172 LLGKAKMVN-KALSVFYQI---KGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCND 227
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ F D +Y+ ++S G A + EMK GL P Y +L+ + D +
Sbjct: 228 GNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEK 287
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A + +M GC+ + TY I + G ++ A R+F +M++ G PD SL+
Sbjct: 288 ALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLIN 347
Query: 514 GLCQETNLQAAFEVFNK 530
L + L+ ++F K
Sbjct: 348 ILGKVGRLEVTLKLFRK 364
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 66/151 (43%), Gaps = 2/151 (1%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY-NSLMEACCREDLLRPAKKL 457
D S+ ++ L +G E + IQ+M R S Y + +++ + ++ A +
Sbjct: 126 DSSSFMALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKAKMVNKALSV 185
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG-VAPDATTYTSLLEGLC 516
+ Q+ C TYN +I + G +E +++ M G PD TY++L+
Sbjct: 186 FYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFG 245
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
+ + +A +F++ + + I +T +
Sbjct: 246 KLGHYDSAIRLFDEMKENGLYPTAKIYTTLL 276
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 172/408 (42%), Gaps = 36/408 (8%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N++++ LAS +D A K F+ M G E I F I FC+ + +L++ K
Sbjct: 11 NTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALK 70
Query: 218 RENSMINGSVIAVLIIHGFCKG--------------------------------KRVEEA 245
R + + +IHG+CK KR++EA
Sbjct: 71 RFRPDV---FLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEA 127
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
++ +EL+ C P+ +AY V + G + + ++ P Y I G
Sbjct: 128 CELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDG 187
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPT 364
L + + +A ++ E +V D LI S A + M+ KG PT
Sbjct: 188 LCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPT 247
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
T ++ CK + +E EV + + + ++S+ + GR EAY V+
Sbjct: 248 AVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLT 307
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
EM +G PDV Y SL++ + A+ ++D M GC+ + TY +I FS++G
Sbjct: 308 EMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIG 367
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
+E A + M + GV PD Y SL++G + + AF V+++ V
Sbjct: 368 NVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMV 415
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 122/527 (23%), Positives = 224/527 (42%), Gaps = 55/527 (10%)
Query: 51 LVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQV 110
L VI+ Y L G+F + P + +SY +++K L+ S++I+ + +++
Sbjct: 78 LYTSVIHGYC-KAGDLDTGYFRAVT--PKASLDVISYTTVIKGLADSKRIDEACELFEEL 134
Query: 111 KVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN----------------CE-DIG 153
K + + Y +I L++ + F E+ + C+ +
Sbjct: 135 KTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQML 194
Query: 154 PEIC-------------NSLLAVLASDGY-----IDNALKMFDEMSHRGVEFSTIGFGVF 195
P+ C +++ DG+ +D A K+ D M +G E + + +G
Sbjct: 195 PDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSI 254
Query: 196 IWKFCENAKLGQVLSMLDEVRK-----RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD 250
+ FC+ L M++E ++ RE G I ++ + R EEA++VL
Sbjct: 255 VHGFCK-------LDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLT 307
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
E+ R C PD I Y + + G V E V + G AP Y I
Sbjct: 308 EMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIG 367
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
+ A E+ E++ D N+L+ G V A ++ M+ G P T +
Sbjct: 368 NVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFN 427
Query: 370 NLSKNLCKRNKSDELVEVYK-VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
L L K K+D ++K +L + + SY +++ L +GR+ EA+ QEM
Sbjct: 428 VLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMID 487
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
+G+ P+ Y SL+ + + + AKKL + M G + +++ Y+ LI+ + ++
Sbjct: 488 RGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDT 547
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGL---CQETNLQAAFEVFNKSV 532
A +F M+++G AP+ TY L G + +L+A + F++ V
Sbjct: 548 AWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQGV 594
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 38/239 (15%)
Query: 335 NALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCK---------------- 377
N +I ++SID A FFN MI+ G P + + L CK
Sbjct: 11 NTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALK 70
Query: 378 RNKSDELVE---VYKVLSAND----YFT--------DMESYNVMVSFLCTSGRLREAYGV 422
R + D + ++ A D YF D+ SY ++ L S R+ EA +
Sbjct: 71 RFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACEL 130
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+E+K G P+V Y ++++ + + K +++M S C TY ++I +
Sbjct: 131 FEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCK 190
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
+ A ++F M++KG PD TYT+L++G + + + A ++ DVML +
Sbjct: 191 AQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL------DVMLTKG 243
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/198 (19%), Positives = 89/198 (44%), Gaps = 6/198 (3%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G PT+ + + + L +K DE + + + N D+ ++ ++ C +G+ +
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 420 YGVI-QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
+ ++ Q +KR PDV Y S++ C+ L + + S ++ +Y +I
Sbjct: 62 HKLLNQALKR--FRPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTVIK 116
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
++ I+ A LF + G +P+ YT++++GL + ++ + F + +
Sbjct: 117 GLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVP 176
Query: 539 ARSILSTFMISLCRRVLI 556
R+ + + LC+ ++
Sbjct: 177 TRTTYTVVIDGLCKAQML 194
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 95/212 (44%), Gaps = 8/212 (3%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y+S++ +++ V ++ + I ++ + ++ L + T +AFS+F E
Sbjct: 389 FAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKE 448
Query: 145 VKFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ E++ P + + + + L G + A F EM RG+ + I+ +
Sbjct: 449 M-LEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKA 507
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
++ + +++++ K +N V A +I G V+ A+ V E+ R C P+
Sbjct: 508 GRIPEAKKLVEDMVKLG---VNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNE 564
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
+ Y+++ F+ G + E V K+ GVA
Sbjct: 565 VTYKVLRRGFRAAGRALDLEAV-KQHFSQGVA 595
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 135/554 (24%), Positives = 242/554 (43%), Gaps = 57/554 (10%)
Query: 15 QAIISASNR-TRPARKWTPLLEQTLHQLG----LRDSLSPSLVARVINP----YLLTHHS 65
QA++SA R +P+RK L+ + G R++ + AR I P Y H+
Sbjct: 297 QAVVSAFERIKKPSRKEYGLMVNYYTRRGDMHRARETFE-KMRARGIEPSSHVYTNLIHA 355
Query: 66 LALGFFNWAS-------QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLD 118
A+G + ++ S ++Y ++ + + + D ++ K +L+
Sbjct: 356 YAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLN 415
Query: 119 SSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFD 178
+ +Y II + Q N KA ++ E++ D +I ++++ G D L +F+
Sbjct: 416 AIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFE 475
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFC 237
G+ S I +G I + AKLG+V L+ ++ E++ I ++ ++I+GF
Sbjct: 476 RFKECGLNPSVITYGCLINLY---AKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFL 532
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV-------------------- 277
K K AF + ++L KPD + Y + F MG +
Sbjct: 533 KLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTR 592
Query: 278 --------FEREVVLKKK-------RKLGVAPRTNDYREFILGLIVERRICEAKE-LGEV 321
F R+ +KK R G P + Y ILGL+ +R++ +A++ L E+
Sbjct: 593 TFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEM 652
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
++G + + G S D A +F + ++G + T L K CK +
Sbjct: 653 TLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRM 712
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+ V K +SA + + YN+++ G + EA ++Q+MKR+G+ PD+ Y S
Sbjct: 713 QSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSF 772
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ AC + ++ A K ++M + G N+KTY LI+ ++ E AL F M G+
Sbjct: 773 INACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGL 832
Query: 502 APDATTYTSLLEGL 515
PD Y L+ L
Sbjct: 833 KPDRAVYHCLMTSL 846
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/458 (20%), Positives = 191/458 (41%), Gaps = 44/458 (9%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLA 165
++++ I S VY +I + G++ ++A S ++K ++ + L++ A
Sbjct: 333 TFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFA 392
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMING 225
G ++A F E + + I +G I+ +C+ + + ++ VR+ E I+
Sbjct: 393 KTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEAL---VREMEEEGIDA 449
Query: 226 SV-IAVLIIHGFCKGKRVEEAFKVLDELRIREC--KPDFIAYRIVAEEFKLMGSVFEREV 282
+ I ++ G+ ++ V + R +EC P I Y + + +G V +
Sbjct: 450 PIDIYHTMMDGYTMVGDEDKCLLVFE--RFKECGLNPSVITYGCLINLYAKLGKVSKALE 507
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID----DDVLNALI 338
V K+ G+ Y I G + + A + E ++ D ++++ A
Sbjct: 508 VSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFC 567
Query: 339 G------SVSSI--------------------------DPRSAIVFFNFMIEKGRVPTLS 366
G +V ++ + + A+ F+ M G +PT+
Sbjct: 568 GMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVH 627
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T + L L ++ K ++ ++ ++ + +Y ++ + G +A+ ++
Sbjct: 628 TYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKL 687
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
+ +GL DV Y +L++ACC+ ++ A + +M A N YNILI ++ G+I
Sbjct: 688 RDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDI 747
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
A L M +GV PD TYTS + + ++Q A
Sbjct: 748 WEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRA 785
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/407 (18%), Positives = 173/407 (42%), Gaps = 3/407 (0%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
Y ++ + + +A F +++ + + +L+ A ++ AL +M
Sbjct: 314 YGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMK 373
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
G+E S + + + + F + E +++ +S+ ++I II+ +C+
Sbjct: 374 EEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSL--NAIIYGNIIYAYCQRCN 431
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+++A ++ E+ Y + + + ++G + +V ++ ++ G+ P Y
Sbjct: 432 MDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGC 491
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKG 360
I ++ +A E+ + + + + LI G + D +A F +I+ G
Sbjct: 492 LINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDG 551
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P + +N+ C K D V K + + ++ ++ G +++A
Sbjct: 552 IKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKAL 611
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
V M+ G P V YN+L+ + + A+++ D+M +G S N TY ++ +
Sbjct: 612 DVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGY 671
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
+ +G+ A F + ++G+ D TY +LL+ C+ +Q+A V
Sbjct: 672 ASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAV 718
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 17/156 (10%)
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
T+ E++ +VS A+ I++ RK V++Y R D+ R A++
Sbjct: 291 TEPENWQAVVS----------AFERIKKPSRKEYGLMVNYYTR------RGDMHR-ARET 333
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+++M A G + Y LI ++ ++E AL M E+G+ TY+ L+ G +
Sbjct: 334 FEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAK 393
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
N ++A F ++ L I + + C+R
Sbjct: 394 TGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQR 429
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 175/387 (45%), Gaps = 3/387 (0%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G +D K+ + M +G++ ++ +G I C KL + E+ ++ ++ +V
Sbjct: 295 GELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ--GILPDTV 352
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+ +I GFCK + A K E+ R+ PD + Y + F +G + E + +
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDP 346
G+ P + + E I G + +A + ++ + + LI G D
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
SA + M + G P + T +++ LCK +E V++ A D +Y +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ C SG + +A +++EM KGL P + +N LM C +L +KL + M A G
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ N T+N L+ ++ ++ A ++ +M +GV PD TY +L++G C+ N++ A+
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 527 VFNKSVNHDVMLARSILSTFMISLCRR 553
+F + ++ S S + +R
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKR 679
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/487 (21%), Positives = 202/487 (41%), Gaps = 48/487 (9%)
Query: 63 HHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVY 122
HH L L + +T +SY +++ +++ + +++ +K + +S +Y
Sbjct: 266 HHLLLL------MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 123 RFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEM 180
II L + +A F+E+ + I P+ + +L+ G I A K F EM
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIR--QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 377
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
R + + + I FC+ + + + E+ + + SV +I+G+CK
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK--GLEPDSVTFTELINGYCKAG 435
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+++AF+V + + C P+ + Y + + G + +L + K+G+ P Y
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 301 EFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
+ GL I EA K +GE +G LNA
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAG--------LNA----------------------- 524
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
T + L CK + D+ E+ K + + ++NV+++ C G L +
Sbjct: 525 ----DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
++ M KG+ P+ + +NSL++ C + L+ A ++ M + G + KTY L+
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ ++ A LF M KG + +TY+ L++G + A EVF++ +
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Query: 540 RSILSTF 546
+ I F
Sbjct: 701 KEIFDFF 707
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 99/194 (51%)
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
KG P + + S + C+ + D++ ++ +V+ + Y ++ LC +L E
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A EM R+G+ PD Y +L++ C+ +R A K + +M + + ++ TY +IS
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
F ++G++ A +LFH M KG+ PD+ T+T L+ G C+ +++ AF V N +
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 539 ARSILSTFMISLCR 552
+T + LC+
Sbjct: 455 NVVTYTTLIDGLCK 468
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 108/219 (49%), Gaps = 2/219 (0%)
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSS--IDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
EA+ + E +++ + D N + +S +AI+ F E G +++ + +
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
+C+ + E + ++ Y D+ SY+ +V+ C G L + + +I+ MKRKGL
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
P+ Y S++ CR L A++ + +M G + Y LI F + G+I A +
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
F+ M + + PD TYT+++ G CQ ++ A ++F++
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 347 RSAIVFFNFMIEKGRVPTLST----LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
R A F M+ G V ++ + L+ LSK+ K+ + V++ ++ S
Sbjct: 192 REARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC---YKTATAIIVFREFPEVGVCWNVAS 248
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN+++ F+C GR++EA+ ++ M+ KG PDV Y++++ CR L KL + M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G N Y +I + ++ A F M+ +G+ PD YT+L++G C+ +++
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 523 AA----FEVFNKSVNHDVMLARSILSTF 546
AA +E+ ++ + DV+ +I+S F
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGF 396
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 213/495 (43%), Gaps = 38/495 (7%)
Query: 67 ALGFFN-WASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
AL FN +QP S + ++ +L S++ ++ + + S+ +Q+ I D +
Sbjct: 29 ALSTFNRMLHKQP--PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIV 86
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
I SL AFS ++ +L+ L +G I AL +FD+M G
Sbjct: 87 INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 146
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE--------NSMING--------SVIA 229
+ + + +G I C++ ++ + ++ E+ + NS+I+G V
Sbjct: 147 QPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTT 206
Query: 230 VL-----------------IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
++ ++ CK V EA V+D + R +P+ + Y + +
Sbjct: 207 LMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHC 266
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
L V V Y I G + + +A L E + + T +
Sbjct: 267 LRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTV 326
Query: 333 VLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
N LI + + + AI F+ M+ +G++P L T LS LCK D+ + + K +
Sbjct: 327 TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI 386
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+++ D++ Y ++ +C +G L +A + + KGL P+V YN ++ C++ LL
Sbjct: 387 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLL 446
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A KL+ +M +GCS N TYN++ F E + L ML +G + D +T T+L
Sbjct: 447 AEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVST-TTL 505
Query: 512 LEGLCQETNLQAAFE 526
L G+ + L + +
Sbjct: 506 LVGMLSDDGLDQSVK 520
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 161/364 (44%), Gaps = 38/364 (10%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D AL F+ M H+ ST+ F + + +LS+ R+ ++ I V
Sbjct: 26 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSL---SRQMDSFGIPPDVYT 82
Query: 230 V-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+ ++I+ C RV+ AF L ++ +PD + + + G + E + K
Sbjct: 83 LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 142
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS 348
G P Y I GL +R++ EA F I
Sbjct: 143 GEGFQPNVVTYGTLINGLCKDRQVTEA-----------FNI------------------- 172
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
F+ MI KG P + T ++L LCK + + + + + D+ + N +V
Sbjct: 173 ----FSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 228
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G + EA+ V+ M +G++P+V YN+LM+ C + + A K++D M C
Sbjct: 229 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 288
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ +YN LI+ + ++ ++ A+ LF M + + P+ TY +L+ GLC LQ A +F
Sbjct: 289 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 348
Query: 529 NKSV 532
++ V
Sbjct: 349 HEMV 352
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 169/407 (41%), Gaps = 59/407 (14%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D+AL F+ M H ST+ F + + VLS+ ++ ++ I V
Sbjct: 562 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQM---DSFGIPPDVYT 618
Query: 230 V-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+ ++I+ FC +R+ AF VL +L +PD + Y G++ L K
Sbjct: 619 LNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTY----------GTLMNG---LCKMI 665
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKE----LGEVIVS-------------------G 325
G++P Y I L +CE K L E++ S G
Sbjct: 666 TKGISPDIFTYNSLIHALC---NLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEG 722
Query: 326 KFTIDDDVLNALI----------------GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
I DV++ +I G + A+ F+ M+ KG VP + + +
Sbjct: 723 MIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYN 782
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
L C+ + D+ + + + +S D +YN ++ LC GRL+ A + EM
Sbjct: 783 ILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVAS 842
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
G PD+ Y L++ C+ L A L + S ++ YNI I GE+E A
Sbjct: 843 GQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAA 902
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
LF N+ KG+ PD TY ++ GLC+ L A ++F K +D+
Sbjct: 903 RDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDI 949
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/516 (18%), Positives = 200/516 (38%), Gaps = 78/516 (15%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PN ++Y++++ L +++ V + + Y +I + ++
Sbjct: 252 EPNV----VTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 307
Query: 137 KAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
KA +F E+ +++ P N+L+ L G + +A+ +F EM RG + +
Sbjct: 308 KAMYLFEEMSR--QELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT 365
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSV-IAVLIIHGFCKGKRVEEAFKVLDELR 253
C+N L + +++L + E S + + I I+ G C+ +E+A + L
Sbjct: 366 LSDYLCKNRHLDKAMALLKAI---EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLS 422
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+ +P+ Y I+ G + E + + K G +P Y G +
Sbjct: 423 SKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEAL 482
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVS---------------------------SIDP 346
EL E +++ F++D L+G +S S+ P
Sbjct: 483 RTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPP 542
Query: 347 --------------------RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
A+ FN M+ P+ + L ++ K ++
Sbjct: 543 LFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLS 602
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
+ + + D+ + N++++ C RL A+ V+ ++ + G PDV Y +LM C
Sbjct: 603 LSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC 662
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ M G S ++ TYN LI + E + L + M+ + P+
Sbjct: 663 K-------------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVV 709
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
++++++ LC+E + A +V D+M+ R +
Sbjct: 710 VFSTVVDALCKEGMIAIAHDVV------DMMIKRGV 739
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 151/369 (40%), Gaps = 21/369 (5%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK-- 217
LL +A + L + +M G+ + I FC +LG S+L ++ K
Sbjct: 587 LLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLG 646
Query: 218 ------RENSMINGSVIAVL------------IIHGFCKGKRVEEAFKVLDELRIRECKP 259
+++NG + +IH C + +L+E+ + P
Sbjct: 647 FQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMP 706
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
+ + + V + G + V+ K GV P Y + G + + EA ++
Sbjct: 707 NVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVF 766
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ +V + N LI I A+ M +G + T + L LC
Sbjct: 767 DTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHV 826
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+ + ++ + A+ D+ +Y +++ +LC + L EA +++ ++ LD D+ Y
Sbjct: 827 GRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVY 886
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
N ++ CR L A+ L+ + + G +++TYNI+I + G ++ A +LF M E
Sbjct: 887 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDE 946
Query: 499 KGVAPDATT 507
+ ++T+
Sbjct: 947 NDIWSNSTS 955
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 103/208 (49%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ FN M+ K P+ + L ++ K L+ + + + + D+ + ++++
Sbjct: 29 ALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVIN 88
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC R+ A+ + ++ + G PD + + +L+ C E + A L+D+M G
Sbjct: 89 SLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQP 148
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ TY LI+ + ++ A +F M+ KG++P+ TY SL+ GLC+ + +
Sbjct: 149 NVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLM 208
Query: 529 NKSVNHDVMLARSILSTFMISLCRRVLI 556
N+ V+ +M L+T + +LC+ ++
Sbjct: 209 NEMVDSKIMPDVFTLNTVVDALCKEGMV 236
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 96/197 (48%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
+++ G P +T + L + LC K E + ++ + + ++ +Y +++ LC +
Sbjct: 106 ILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQ 165
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ EA+ + EM KG+ P++ YNSL+ C+ + L ++M S ++ T N
Sbjct: 166 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 225
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
++ + G + A + M+ +GV P+ TY +L++G C + A +VF+ V+ D
Sbjct: 226 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 285
Query: 536 VMLARSILSTFMISLCR 552
+ +T + C+
Sbjct: 286 CVANVISYNTLINGYCK 302
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 102/535 (19%), Positives = 204/535 (38%), Gaps = 67/535 (12%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSL-SLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
A+ F S+Q T + ++Y++++ L + R +AI + V +I D YR +
Sbjct: 309 AMYLFEEMSRQ-ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIP-DLVTYRTL 366
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
L + ++ KA ++ ++ + D +I ++L + G +++A +F +S +G+
Sbjct: 367 SDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGL 426
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
+ + + + I C+ L + + E+ K N LI GF +
Sbjct: 427 QPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK--NGCSPNDCTYNLITRGFLRNNEALRT 484
Query: 246 FKVLDELRIRE----------------------------CKPDFIAYRIVAEEFKLMGSV 277
++L+E+ R CKP + R + + + +
Sbjct: 485 IELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSS-SSRPSGTQMRSLPPL 543
Query: 278 FEREVV-------------------LKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
F + + P T D+ + + + + L
Sbjct: 544 FLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSL 603
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ S D LN LI S + A +++ G P + T L LCK
Sbjct: 604 STQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK 663
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ K +S D FT YN ++ LC + ++ EM + P+V
Sbjct: 664 M--------ITKGISP-DIFT----YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 710
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
++++++A C+E ++ A + D M G ++ TY L+ E++ A+++F M+
Sbjct: 711 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 770
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
KG P+ +Y L+ G CQ + A + + ++ +T + LC
Sbjct: 771 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCH 825
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 58/137 (42%)
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L EA M K P +N L+ + + L QM + G ++ T I
Sbjct: 26 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
+I+ + ++ A +L+ G PDATT+T+L+ GLC E + A +F+K +
Sbjct: 86 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145
Query: 536 VMLARSILSTFMISLCR 552
T + LC+
Sbjct: 146 FQPNVVTYGTLINGLCK 162
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 173/402 (43%), Gaps = 42/402 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L G + +AL +FD+M HRG S + + +
Sbjct: 166 NPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSI----------------------- 202
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ CK +A +LDE+R + C+PD + Y ++ G V
Sbjct: 203 --------------LLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDV 248
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E +L G P Y + L R E +EL + S K D+ N +
Sbjct: 249 DEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTI 308
Query: 338 IGSVSS---IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+ S+ +D AI + M E G +P + T S++ LC + D+ VE+ L +
Sbjct: 309 VTSLCQQGLVD--RAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSY 366
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D +Y ++ LC+ + A ++ EM PD +N+++ + C++ L+ A
Sbjct: 367 GCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRA 426
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K+ +QM +GC+ ++ TYN +I I+ A+ L N+ G PD T+ +LL+G
Sbjct: 427 IKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKG 486
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
LC + A ++ ++ D + +T + SLC++ L+
Sbjct: 487 LCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLL 528
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 205/490 (41%), Gaps = 46/490 (9%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
F +++ ++++L + ++ +V + + Y ++ + + ++A
Sbjct: 158 FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAM 217
Query: 140 SVFNEVKF-NCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+ +E++ CE P+I N L+ + ++G +D AL + ++ G + + + +
Sbjct: 218 VLLDEMRAKGCE---PDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVL 274
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C + + +V + E+ N V I+ C+ V+ A KV+D +
Sbjct: 275 KSLCGSERWKEVEELFAEMAS--NKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHG 332
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C PD + Y + + +G V + +L + + G P T Y + GL + A+
Sbjct: 333 CIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAE 392
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSS---IDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
EL +V D+ N +I S+ +D AI M E G P + T +++
Sbjct: 393 ELMAEMVCSDCPPDEVTFNTVIASLCQKGLVD--RAIKVVEQMSENGCNPDIVTYNSIID 450
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
LC D+ +E+ L + D+ ++N ++ LC+ R +A ++ M P
Sbjct: 451 GLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPP 510
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL----------------- 476
D + +N+++ + C++ LL A + M +GC N TYNI+
Sbjct: 511 DATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLL 570
Query: 477 ----------------ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
IS ++ G++E AL L M+ G++PD TY SL G+C+E
Sbjct: 571 SGMTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDG 630
Query: 521 LQAAFEVFNK 530
A + +
Sbjct: 631 TDRAIRMLCR 640
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 122/517 (23%), Positives = 220/517 (42%), Gaps = 26/517 (5%)
Query: 30 WTPLLEQTLHQLGLRDS--LSPSLVARVINPYLLTHHSLALGFFNWA---------SQQP 78
++ LL+ T G R + L + A+ P ++T++ L N S P
Sbjct: 200 YSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLP 259
Query: 79 NFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+ P ++Y +LKSL S + ++ + ++ NK D + I+ SL Q
Sbjct: 260 SHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVD 319
Query: 137 KAFSVFNEV-KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
+A V + + + C P+I +S+L L G +D+A+++ + G + TI +
Sbjct: 320 RAIKVVDHMSEHGCI---PDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYT 376
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
+ C + ++ E+ + V +I C+ V+ A KV++++
Sbjct: 377 TVLKGLCSIEQWEHAEELMAEMVCSDCP--PDEVTFNTVIASLCQKGLVDRAIKVVEQMS 434
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
C PD + Y + + + + +L + G P + + GL R
Sbjct: 435 ENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWE 494
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR-SAIVFFNFMIEKGRVPTLSTLSNLS 372
+A++L ++ D N +I S+ AI M E G +P ST + +
Sbjct: 495 DAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVV 554
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFT-DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
L K K+ E + K+LS T D+ +YN ++S + +G++ EA +++ M GL
Sbjct: 555 DALLKAGKTQEAL---KLLSGMTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGL 611
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
PD Y SL CRED A ++ ++ G S + YN ++ F + + A+
Sbjct: 612 SPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAID 671
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
F +M+ G PD +TY LLE L E L A ++
Sbjct: 672 CFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLL 708
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/469 (21%), Positives = 203/469 (43%), Gaps = 12/469 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+ ++ ++ ++ ++L + + D+ Y ++ SL + ++ +F E
Sbjct: 233 VTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAE 292
Query: 145 VKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ N P+ N+++ L G +D A+K+ D MS G + + + C+
Sbjct: 293 MASN--KCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDV 350
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
++ + +L R + ++ ++ G C ++ E A +++ E+ +C PD +
Sbjct: 351 GRVDDAVELLS--RLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEV 408
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
+ V G V V+++ + G P Y I GL ER I +A EL +
Sbjct: 409 TFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNL 468
Query: 323 VSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
S D N L+ + S+D A M+ P +T + + +LC++
Sbjct: 469 QSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLL 528
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+ +E K+++ N + +YN++V L +G+ +EA ++ M PD+ YN++
Sbjct: 529 LQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTV 586
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ + + A L M ++G S + TY L + A+R+ + + G+
Sbjct: 587 ISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGL 646
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
+PDAT Y +L G CQ A + F V+ M ST++I L
Sbjct: 647 SPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDE---STYIILL 692
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 161/395 (40%), Gaps = 53/395 (13%)
Query: 170 IDNALKMFDEMSHRG-----VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
ID+AL + D ++ G + + + I + C ++ +R + +
Sbjct: 74 IDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADA--------ERVFATLG 125
Query: 225 GSVIAVL---IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
S V +++G+C+ R+E+A +++ + PD + + + G V +
Sbjct: 126 ASATVVTYNTMVNGYCRAGRIEDARRLISGMPF---PPDTFTFNPLIRALCVRGRVPDAL 182
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
V G +P Y I+ C+A SG
Sbjct: 183 AVFDDMLHRGCSPSVVTYS------ILLDATCKA--------SGY--------------- 213
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
R A+V + M KG P + T + L +C DE + + L ++ D
Sbjct: 214 -----RQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAV 268
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y ++ LC S R +E + EM PD +N+++ + C++ L+ A K+ D M
Sbjct: 269 TYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHM 328
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
GC ++ TY+ ++ +VG ++ A+ L + G PD YT++L+GLC
Sbjct: 329 SEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQW 388
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+ A E+ + V D +T + SLC++ L+
Sbjct: 389 EHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLV 423
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 58 PYLLTHHSLALGFFN---WASQQP---NFTHS-----PLSYHSILKSLSLSRQINAIDSV 106
P ++T ++L G + W + N HS ++++++ SL +
Sbjct: 475 PDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIET 534
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLAS 166
LK + N + S Y ++ +L++ TQ+A + + + D+ N++++ +
Sbjct: 535 LKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDLITY--NTVISNITK 592
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
G ++ AL + M G+ TI + + C + + ML R ++ + +
Sbjct: 593 AGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRML--CRLQDMGLSPDA 650
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
I+ GFC+ R + A + C PD Y I+ E + E + +L
Sbjct: 651 TFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVN 710
Query: 287 KRKLGV 292
LGV
Sbjct: 711 LCSLGV 716
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 168/378 (44%), Gaps = 11/378 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM----LD 213
N LL VL G + K+ D++ RGV + + +FI C+ +L + M ++
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
+ K + N +I+G CK + +EA L ++ +PD Y + +
Sbjct: 280 QGPKPDVITYNN------LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
G V E ++ G P YR I GL E A L + + +
Sbjct: 334 GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL 393
Query: 334 LNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
N LI +S+ A N M EKG +P + T + L LCK + + KV+
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ YF D+ ++N+++ T ++ A ++ M G+DPDV YNSL+ C+
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
+ + M GC+ NL T+NIL+ +++ AL L M K V PDA T+ +L+
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 513 EGLCQETNLQAAFEVFNK 530
+G C+ +L A+ +F K
Sbjct: 574 DGFCKNGDLDGAYTLFRK 591
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 132/537 (24%), Positives = 226/537 (42%), Gaps = 67/537 (12%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKIT-LDSSVYRFI 125
AL FN ++ F H+ +Y S+++ L + A++ VL ++ N + VY
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGA 82
Query: 126 IPSLIQGKNTQKAFSVFNEVKF-NCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSH 182
+ + + Q+A +VF + F +CE P + N++++VL GY D A K++ M
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCE---PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRD 139
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGF----- 236
RG+ F + + FC+ ++ L +L+ + + M +V+A ++ GF
Sbjct: 140 RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEM---NVVAYCTVVGGFYEENF 196
Query: 237 ------------------------------CKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
CK V+E K+LD++ R P+ Y +
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256
Query: 267 ----VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK-ELGEV 321
+ + +L G+V ++++ G P Y I GL + EA+ LG++
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQ----GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 322 IVSGKFTIDDDVLNALI------GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ G D N LI G V + FN G VP T +L L
Sbjct: 313 VNEG-LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFN-----GFVPDQFTYRSLIDGL 366
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C +++ + ++ ++ YN ++ L G + EA + EM KGL P+V
Sbjct: 367 CHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEV 426
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
+N L+ C+ + A L M + G ++ T+NILI +S ++E AL +
Sbjct: 427 QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDV 486
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
ML+ GV PD TY SLL GLC+ + + E + V + + SLCR
Sbjct: 487 MLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 195/429 (45%), Gaps = 35/429 (8%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK-------LGQVLS 210
N + L G +D A++M + +G + I + I+ C+N+K LG++++
Sbjct: 255 NLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVN 314
Query: 211 -MLDEVRKRENSMINGSVIAVLI-------------------------IHGFCKGKRVEE 244
L+ N++I G ++ I G C
Sbjct: 315 EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR 374
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A + +E + KP+ I Y + + G + E + + + G+ P + +
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVP 363
GL + +A L +V++S + D N LI G + + +A+ + M++ G P
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ T ++L LCK +K ++++E YK + ++ ++N+++ LC +L EA G++
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM-FASGCSGNLKTYNILISKFSE 482
+EMK K ++PD + +L++ C+ L A L+ +M A S + TYNI+I F+E
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTE 614
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
+ A +LF M+++ + PD TY +++G C+ N+ ++ + + + + + +
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTT 674
Query: 543 LSTFMISLC 551
L + LC
Sbjct: 675 LGRVINCLC 683
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 166/387 (42%), Gaps = 5/387 (1%)
Query: 173 ALKMFDEMSHR-GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR-ENSMINGSVIAV 230
AL+MF+ M G + + + I K K + +L ++R+ N M+ G +
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGA 82
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+ +G KGK V+EA V + + +C+P +Y + G + V + R
Sbjct: 83 MKNYGR-KGK-VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR 140
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-A 349
G+ P + + R A L + S ++ ++G + ++
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F M+ G LST + L + LCK+ E ++ + ++ +YN+ +
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC G L A ++ + +G PDV YN+L+ C+ + A+ +M G +
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
TYN LI+ + + G ++ A R+ + + G PD TY SL++GLC E A +FN
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380
Query: 530 KSVNHDVMLARSILSTFMISLCRRVLI 556
+++ + + +T + L + +I
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMI 407
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 167/350 (47%), Gaps = 5/350 (1%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL- 231
A +F +M G + + + + I C+ ++ + L + ++ ++ I+ ++
Sbjct: 99 AAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKD---ISPTIFTYTS 155
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I G C R +EA +L+E+ P+ + + ++ + F G V E VLK ++G
Sbjct: 156 LIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMG 215
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAI 350
V P Y + G + + EA++L +V+++ D + LI G + A
Sbjct: 216 VEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAK 275
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
FN MI +G P + + L LC+ + E +++K + N ++ +Y +++
Sbjct: 276 QLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGF 335
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C G L +A+ + + M+ L P++ YN L+ A C+ L+ A++L+ ++F G N+
Sbjct: 336 CKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNV 395
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
+ Y +I+ + G ++ AL F NM + G PD +Y ++ G Q +
Sbjct: 396 QIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKD 445
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 144/299 (48%), Gaps = 1/299 (0%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I+ FC+ +RV+ F VL + +P + + + +G + +
Sbjct: 15 ILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVAR 74
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSA 349
G P Y I GL A L + + ++ + LI S+ A
Sbjct: 75 GCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEA 134
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ F++M K PT+ T ++L + LC ++ E + +++ + ++ ++NV+V
Sbjct: 135 LDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDT 194
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
C G++ A GV++ M G++PDV YNSLM + A+KL+D M GC +
Sbjct: 195 FCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPD 254
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ +Y+ILI+ + + I+ A +LF+ M+ +G P+ +Y +L+ GLCQ L+ A ++F
Sbjct: 255 VFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLF 313
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 1/271 (0%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
VL K KLG+ P + I GL + +A EL + +V+ DD +I +
Sbjct: 32 VLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLC 91
Query: 343 SIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
I + A F M E G + T S L +LCK + +E ++++ + A D +
Sbjct: 92 KIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIF 151
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y ++ LC R +EA ++ EM + P+V +N L++ C+E + A+ + M
Sbjct: 152 TYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTM 211
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G ++ TYN L+ +S E+ A +LF M+ KG PD +Y+ L+ G C+ +
Sbjct: 212 TEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRI 271
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A ++FN+ ++ +T + LC+
Sbjct: 272 DEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQ 302
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 71/150 (47%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+ N++++ C R+ + V+ + + GL P + + +L+ + A +L+D M
Sbjct: 12 TLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDM 71
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
A GC + TY +I+ ++GE A LF M E G + TY++L+ LC+ +
Sbjct: 72 VARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRV 131
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLC 551
A ++F+ D+ ++ + LC
Sbjct: 132 NEALDIFSYMKAKDISPTIFTYTSLIQGLC 161
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%)
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M +G S N T NILI+ F ++ ++ + ++ G+ P T+T+L+ GL +
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A E+F+ V +T + LC+
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCK 92
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 202/461 (43%), Gaps = 26/461 (5%)
Query: 101 NAIDSVLKQVKVNKITL--DSSVYRFIIPSLIQGKNTQKAFSVF----------NEVKFN 148
N +++ L K+ + L D+ Y +I + K A+ VF NEV +
Sbjct: 209 NVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYT 268
Query: 149 CEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV 208
+L+ L G I+ ALK+F +M+ + + V I+ + + +
Sbjct: 269 ----------NLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEA 318
Query: 209 LSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVA 268
L++ +E++++ N VLI G CK +++EA K+L E+ + P + Y +
Sbjct: 319 LNLFNEMKEK-GCEPNVHTYTVLI-DGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFT 328
+ + G + + +L P T Y E I GL +R++ +A L ++ K +
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436
Query: 329 IDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
N+LI G D SA + M E G VP T S LCK + +E +
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
+ + A + Y ++ C G++ AY +++ M P+ YN L+E C+
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
E ++ A L +M G + TY ILI + + G + AL++F++M+ G PD T
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCT 616
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
YT+ L + L+ +V K +N + +L + T +I
Sbjct: 617 YTAFLHAYFSQGMLEEVDDVIAK-MNEEGILPDLVTYTVLI 656
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 129/565 (22%), Positives = 230/565 (40%), Gaps = 91/565 (16%)
Query: 24 TRPARKWTPLLEQTLHQLGLRDSLSPSLVARV----INPYLLTHHSLALGFFNWASQQPN 79
+RP + P L + L SL+PS V+ + ++P AL FFNW + +P
Sbjct: 49 SRPNWQKHPSLRKLL------PSLTPSHVSSLFAFNLDP------QTALSFFNWIALRPG 96
Query: 80 FTHSPLSYHSILKSL--------------SLSRQINAIDSVLKQVKV-NKITLDSS---- 120
F H+ SY S+L L S+ + +I+ VL ++V K+ D
Sbjct: 97 FKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFK 156
Query: 121 ----VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNAL 174
Y I+ SL + + +V+ E+ N I P I N+++ G + A
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNN--QISPNIYTFNAMVNGYCKIGNVVEAE 214
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML-----DEVRKRENSMINGSVIA 229
++ G+ T + I C N + + ++ E S N
Sbjct: 215 LYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTN----- 269
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+IHG C+ R+ EA K+ ++ C P Y ++ G E + + ++
Sbjct: 270 --LIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKE 327
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSA 349
G P + Y I GL E ++ EA+++
Sbjct: 328 KGCEPNVHTYTVLIDGLCKENKMDEARKM------------------------------- 356
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ M EKG +P++ T + L CK D+ E+ ++ +N + +YN ++
Sbjct: 357 ---LSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICG 413
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC ++ +A ++ +M + L P + YNSL+ C+ + L A +L M +G +
Sbjct: 414 LCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPD 473
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
TY++ I + G +E A LF ++ KGV + YT+L++G C+ + A+ +
Sbjct: 474 QWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLE 533
Query: 530 KSVNHDVMLARSILSTFMI-SLCRR 553
+ +N D L S +I LC+
Sbjct: 534 RMLN-DACLPNSYTYNVLIEGLCKE 557
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 197/466 (42%), Gaps = 44/466 (9%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+ ++ L R+++ ++L ++ K++ Y +I + + + A+ + + +
Sbjct: 406 TYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLM 465
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
N + + L +G ++ A +FD + +GV+ + + + I +C+ K+
Sbjct: 466 NENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKI 525
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
S+L+ R ++ + S ++I G CK K+++EA ++ ++ KP + Y
Sbjct: 526 DVAYSLLE--RMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYT 583
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
I+ E G+ V LG P Y F+ + + +E+ +VI
Sbjct: 584 ILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGML---EEVDDVIAKM 640
Query: 326 KFTIDDDVLNALIGSVSSID-------PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
++ +L L+ ID A F M++ G P+L +S L KNL
Sbjct: 641 N---EEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHE 697
Query: 379 NKSDE-----------------LVEVYKVLS------------ANDYFTDMESYNVMVSF 409
N+ E + +V+K L + D+ Y +++
Sbjct: 698 NRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAG 757
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
C RL EA G++ MK +G+ P YNSL++ CC+ + A +L D M +G
Sbjct: 758 FCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPL 817
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L++Y +L+ G E A +FH +L G D + L++GL
Sbjct: 818 LESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGL 863
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 115/513 (22%), Positives = 201/513 (39%), Gaps = 67/513 (13%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
Q + +SY +++ L + +IN + + + Y +I +L
Sbjct: 257 QKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKV 316
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+A ++FNE+K + L+ L + +D A KM EMS +G+ S + + I
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
+C+ + +LD + NS + +I G CK ++V +A +L+++ R+
Sbjct: 377 DGYCKEGMIDDAFEILDLMES--NSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK 434
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
P I Y + + + +L + G+ P Y FI L E R+ EA
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAG 494
Query: 317 ELGEVIVSGKFTIDDDVLNALIGS---VSSIDPRSAIV-------------FFNFMIEK- 359
L + + + ++ + ALI V ID +++ +N +IE
Sbjct: 495 TLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554
Query: 360 -------------------GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
G PT+ T + L + K D ++V+ + + Y D+
Sbjct: 555 CKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDV 614
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+Y + + G L E VI +M +G+ PD+ Y L++ R L A
Sbjct: 615 CTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKC 674
Query: 461 MFASGCSGNLKTYNILISKFS----------EVG-------------------EIEGALR 491
M +GC +L +ILI S E+G E E AL+
Sbjct: 675 MVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALK 734
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
LF M+E G D + Y +L+ G CQ+ L+ A
Sbjct: 735 LFEKMVEHGCTIDVSIYGALIAGFCQQERLEEA 767
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/491 (21%), Positives = 218/491 (44%), Gaps = 8/491 (1%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL N A + +F S Y I++ L + + ++ ++++++ + V R +
Sbjct: 72 ALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFV 131
Query: 127 PSLIQGKNTQKAFS-VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
S + + A V N++ + N LL VLA + +++EM+ RG+
Sbjct: 132 ESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGI 191
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
+ + I C ++ + ML+E+ +++ ++ GF + +E A
Sbjct: 192 QPDVVTLNTLIKALCRAHQVRTAVLMLEEMSS--HAVAPDETTFTTLMQGFIEEGSIEAA 249
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
+V ++ C P + ++ + MG V + ++K+ G P Y F+
Sbjct: 250 LRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHC 309
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS---SIDPRSAIVFFNFMIEKGRV 362
L + A ++ ++++ D N +I +S +D IV N M+++G +
Sbjct: 310 LCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIV--NQMVDRGCL 367
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P +T + L LC +N+ +E +++ + L+ D+ ++N++++ LC G +
Sbjct: 368 PDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRL 427
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+EMK G PD YN L++ C L A L +M ++GC + TYN +I +
Sbjct: 428 FEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCK 487
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
IE A +F M G++ A T+ +L++GLC+ + A E+ + V + +
Sbjct: 488 QMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNIT 547
Query: 543 LSTFMISLCRR 553
++ + C++
Sbjct: 548 YNSILTHYCKQ 558
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 203/460 (44%), Gaps = 7/460 (1%)
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
L R +A+D V Q+ + D++VY ++ L +G + SV+NE+ I P+
Sbjct: 137 LRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTD--RGIQPD 194
Query: 156 IC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
+ N+L+ L + A+ M +EMS V F + F E + L +
Sbjct: 195 VVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRV-- 252
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
+ + E V ++I+G+CK RVE+A + + +PD + Y
Sbjct: 253 KTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQ 312
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
G V V+ + G P Y I L + EAK + +V D
Sbjct: 313 NGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTT 372
Query: 334 LNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
N LI ++ S + A+ + KG P + T + L LCK + +++ +
Sbjct: 373 FNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMK 432
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
++ D +YN+++ LC+ G+L A +++EM+ G YN++++A C++ +
Sbjct: 433 SSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIE 492
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A++++DQM A G S + T+N LI + I+ A L M+++G+ P TY S+L
Sbjct: 493 EAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSIL 552
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
C++ +L+ A ++ + + T + LC+
Sbjct: 553 THYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCK 592
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 189/424 (44%), Gaps = 9/424 (2%)
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
+ R +A+ + K++ + D Y + L Q + A V + + D
Sbjct: 278 MGRVEDALGYIQKEI-ADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVF 336
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
N+++ L+ +G +D A + ++M RG T F I C +L + L + E+
Sbjct: 337 TYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAREL 396
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ + ++I+ CK ++ +E++ C PD + Y I+ + MG
Sbjct: 397 TVK--GLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMG 454
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ +LK+ G T Y I L + RI EA+E+ + + + + N
Sbjct: 455 KLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFN 514
Query: 336 ALIGSVSS---IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
LI + ID + ++ M+++G P+ T +++ + CK+ + ++ + ++
Sbjct: 515 TLIDGLCKAKRIDDATELI--EQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMT 572
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
AN + D+ +Y +++ LC +GR + A +++ M+ KG+ P YN ++++ R + LR
Sbjct: 573 ANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLR 632
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVG-EIEGALRLFHNMLEKGVAPDATTYTSL 511
A L+ +M G + TY I+ G I+ A M+ KG P+ +++ L
Sbjct: 633 DALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRML 692
Query: 512 LEGL 515
EGL
Sbjct: 693 AEGL 696
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 194/438 (44%), Gaps = 11/438 (2%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSH 182
++ +L + + + A + N ED P + ++ L + G D + EM
Sbjct: 59 LLTALREQADPEAALQMLNSA-LAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRR 117
Query: 183 RGVEFSTIGFGVFIWKFCEN-AKLGQVLSMLDEVRKRENSMINGSVIAVL--IIHGFCKG 239
G E G GV + F E+ A+L + +D VR + N+ + AV +++ +G
Sbjct: 118 EGHE---AGAGV-VRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEG 173
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
R++ V +E+ R +PD + + + V ++L++ VAP +
Sbjct: 174 SRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTF 233
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIE 358
+ G I E I A + ++ + +N LI + A+ + I
Sbjct: 234 TTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIA 293
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
G P T + LC+ ++V ++ + D+ +YN +++ L +G L E
Sbjct: 294 DGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDE 353
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A G++ +M +G PD + +N+L+ A C ++ L A L ++ G S ++ T+NILI+
Sbjct: 354 AKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILIN 413
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+VG+ +RLF M G APD TY L++ LC L A ++ + ++
Sbjct: 414 ALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPR 473
Query: 539 ARSILSTFMISLCRRVLI 556
+ +T + +LC+++ I
Sbjct: 474 STVTYNTIIDALCKQMRI 491
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 165/388 (42%), Gaps = 13/388 (3%)
Query: 63 HHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS 120
H S AL + Q+ H P +Y++++ LS + +++ ++ Q+ D++
Sbjct: 315 HVSHALKVMDLMLQE---GHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTT 371
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFD 178
+ +I +L ++A + E+ + + P++ N L+ L G +++F+
Sbjct: 372 TFNTLIVALCSQNRLEEALDLARELTV--KGLSPDVYTFNILINALCKVGDPHLGIRLFE 429
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
EM G + + + I C KL L +L E+ N +V II CK
Sbjct: 430 EMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMES--NGCPRSTVTYNTIIDALCK 487
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
R+EEA +V D++ + + + + + + ++++ K G+ P
Sbjct: 488 QMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNIT 547
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMI 357
Y + + + +A ++ E + + F ID LI G + + A+ M
Sbjct: 548 YNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMR 607
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC-TSGRL 416
KG PT + + ++L +RN + + +++ ++ D +Y ++ LC G +
Sbjct: 608 IKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPI 667
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+EA+ + EM KG P+ S + L E
Sbjct: 668 KEAFDFLVEMVNKGFMPEFSSFRMLAEG 695
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 87/197 (44%), Gaps = 3/197 (1%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
+ S +++++++ L +++I+ +++Q+ + + Y I+ + + +KA
Sbjct: 506 ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAA 565
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+ + N +I +L+ L G ALK+ M +G+ + + I
Sbjct: 566 DILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSL 625
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR-VEEAFKVLDELRIRECK 258
L LS+ E+ E ++ ++ G C+G ++EAF L E+ +
Sbjct: 626 FRRNNLRDALSLFREM--TEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFM 683
Query: 259 PDFIAYRIVAEEFKLMG 275
P+F ++R++AE +G
Sbjct: 684 PEFSSFRMLAEGLLNLG 700
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 174/375 (46%), Gaps = 5/375 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
++L+ L G + AL + D M G + + +G + + C K G LD RK
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC---KSGNSALALDLFRK 235
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E I SV+ ++I CK ++A + +E+ ++ K D + Y + G
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ +L++ + P + I + E ++ EAKEL +++ D N+
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G A F+ M+ KG P + T S L + CK + D+ + +++ +S+
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ +YN +V C SG+L A + QEM +G+ P V Y L++ C L A
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+++++M S + + YNI+I +++ A LF ++ +KGV PD TY ++ GL
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 535
Query: 516 CQETNLQAAFEVFNK 530
C++ +L A +F K
Sbjct: 536 CKKGSLSEADMLFRK 550
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 180/406 (44%), Gaps = 25/406 (6%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L + +A D L M G+E + I +C KL S+L K
Sbjct: 74 NRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWK 133
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E I S + ++GFC RV EA ++D + + +PD + + L G
Sbjct: 134 LGYEPDTITFSTL----VNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKG 189
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFI----------LGLIVERRICEAKELGEVIVSG 325
V E V++ + + G P Y + L L + R++ E + + +V
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM-EERNIKASVVQY 248
Query: 326 KFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
ID + S D A+ FN M KG + T S+L LC K D+
Sbjct: 249 SIVIDS------LCKDGSFD--DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
++ + + + D+ +++ ++ G+L EA + EM +G+ PD YNSL++
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+E+ L A +++D M + GC ++ TY+ILI+ + + ++ +RLF + KG+ P+
Sbjct: 361 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
TY +L+ G CQ L AA E+F + V+ V + + LC
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 195/465 (41%), Gaps = 46/465 (9%)
Query: 51 LVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQV 110
L RV +L + GF QP+ ++Y +L L S + +++
Sbjct: 187 LKGRVSEALVLIDRMVEYGF------QPD----EVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 111 KVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYI 170
+ I Y +I SL + + A S+FNE++ +SL+ L +DG
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D+ KM EM R + + F I F + KL + + +E+ R + ++
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR--GIAPDTITYN 354
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I GFCK + EA ++ D + + C+PD + Y I+ + V + + ++
Sbjct: 355 SLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 414
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
G+ P T Y +LG ++ AKEL
Sbjct: 415 GLIPNTITYNTLVLGFCQSGKLNAAKEL-------------------------------- 442
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
F M+ +G P++ T L LC + ++ +E+++ + + + YN+++ +
Sbjct: 443 --FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C + ++ +A+ + + KG+ PDV YN ++ C++ L A L+ +M GC+ +
Sbjct: 501 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
TYNILI + ++ L M G + D++T +++ L
Sbjct: 561 FTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 161/362 (44%), Gaps = 9/362 (2%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL- 231
AL +F +M R ++ S + + + I C++ LS+ +E+ E I V+
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM---EMKGIKADVVTYSS 285
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I G C + ++ K+L E+ R PD + + + + F G + E + + + G
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS---VSSIDPRS 348
+AP T Y I G E + EA ++ +++VS D + LI S +D
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD--D 403
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
+ F + KG +P T + L C+ K + E+++ + + + +Y +++
Sbjct: 404 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC +G L +A + ++M++ + + YN ++ C + A L+ + G
Sbjct: 464 GLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TYN++I + G + A LF M E G PD TY L+ + L ++ E+
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELI 583
Query: 529 NK 530
+
Sbjct: 584 EE 585
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 154/326 (47%), Gaps = 7/326 (2%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I+ +C+ K++ AF VL +PD I + + F L G V E ++ + ++
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD----DVLNALIGSVSSIDP 346
P I GL ++ R+ EA L + +V F D+ VLN L S +S
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS--- 226
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A+ F M E+ ++ S + +LCK D+ + ++ + D+ +Y+ +
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC G+ + +++EM + + PDV +++L++ +E L AK+L+++M G
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ + TYN LI F + + A ++F M+ KG PD TY+ L+ C+ +
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+F + + ++ +T ++ C+
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQ 432
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ I AI F MI+ +PT + L + + + D ++ K + N D
Sbjct: 45 GIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHD 104
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
M + +M++ C +L A+ V+ + G +PD +++L+ C E + A L D
Sbjct: 105 MYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVD 164
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M +L T + LI+ G + AL L M+E G PD TY +L LC+
Sbjct: 165 RMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 224
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
N A ++F K ++ + S + SLC+
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 172/387 (44%), Gaps = 3/387 (0%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G +D K+ ++M +G++ ++ +G I C KL + E+ + ++ ++
Sbjct: 718 GELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQ--GILPDTI 775
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+ ++ GFCK + A K E+ R+ PD + Y + F +G + E + +
Sbjct: 776 VYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 835
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDP 346
G+ P + E + G I +A + ++ + + LI G D
Sbjct: 836 LCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 895
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
SA + M + G P + T +++ LCK +E V++ A D +Y +
Sbjct: 896 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 955
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ C SG + +A ++ EM KGL P + +N LM C +L +KL + M A G
Sbjct: 956 MDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1015
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ N T+N L+ ++ ++ A ++ +M +GV PD TY +L++G C N++ A+
Sbjct: 1016 APNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWF 1075
Query: 527 VFNKSVNHDVMLARSILSTFMISLCRR 553
+F + ++ S S + +R
Sbjct: 1076 LFQEMKGKGFSVSVSTYSVLIKGFFKR 1102
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 128/594 (21%), Positives = 246/594 (41%), Gaps = 101/594 (17%)
Query: 1 MTMRPATDLATRISQAII-------------SASNRTRPARKWTP---------LLEQTL 38
MT+R ++T+I ++I+ S TRP ++P + Q
Sbjct: 427 MTVRKYDVVSTKIPKSIVVFNRTPCPSFSDFSTLTDTRPFPDYSPKKASVRDTEFVHQIT 486
Query: 39 HQLGLRDSLSPSLVARVINPY---------------LLTHHSLALGFFNWAS--QQPNFT 81
+ + LR + + R + PY + + L L FF+WA + N
Sbjct: 487 NVIKLRRA---EPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLE 543
Query: 82 HSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSV 141
+ H + S L + I S ++ K+N + S +Q
Sbjct: 544 SLCIVIHLAVASKDLKVAQSLISSFWERPKLN-----------VTESFVQ---------F 583
Query: 142 FNEVKFNCEDIG--PEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
F+ + + +D G P + + VL G + A K+F++M + G+ S V++ +
Sbjct: 584 FDLLVYTYKDWGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARL 643
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECK 258
++ + + + R+ + +V + ++IH C+ R+ EA +L + ++
Sbjct: 644 SKDCN--KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYT 701
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD I+Y V + G + + +++K ++ G+ P + Y I+GL+ RIC+ E
Sbjct: 702 PDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGS-IIGLLC--RICKLAEA 758
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
E F+ MI +G +P + L CKR
Sbjct: 759 EEA-------------------------------FSEMIGQGILPDTIVYTTLVDGFCKR 787
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+ + + + D D+ +Y ++S C G + EA + EM +GL+PD+ +
Sbjct: 788 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITF 847
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
LM C+ ++ A ++ + M +GCS N+ TY LI + G+++ A L H M +
Sbjct: 848 TELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 907
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
G+ P+ TY S++ GLC+ N++ A ++ + + +T M + C+
Sbjct: 908 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 961
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/490 (20%), Positives = 200/490 (40%), Gaps = 52/490 (10%)
Query: 62 THHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV 121
HH L L + +T +SY +++ +++ + +++++K + +S
Sbjct: 688 AHHLLLL------MELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYT 741
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDE 179
Y II L + +A F+E+ + I P+ + +L+ G I A K F E
Sbjct: 742 YGSIIGLLCRICKLAEAEEAFSEMI--GQGILPDTIVYTTLVDGFCKRGDIRAASKFFYE 799
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV--RKRENSMINGSVIAVLIIHGFC 237
M R + + + I FC+ + + + E+ R E +I + + ++G+C
Sbjct: 800 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTEL----MNGYC 855
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K +++AF+V + + C P+ + Y + + G + +L + K+G+ P
Sbjct: 856 KAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 915
Query: 298 DYREFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFM 356
Y + GL I EA K +GE +G LNA
Sbjct: 916 TYNSIVNGLCKSGNIEEAVKLVGEFEAAG--------LNA-------------------- 947
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
T + L CK + D+ E+ + + ++NV+++ C G L
Sbjct: 948 -------DTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGML 1000
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
+ ++ M KG+ P+ + +N L++ C + L+ A ++ M + G + KTY L
Sbjct: 1001 EDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENL 1060
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+ ++ A LF M KG + +TY+ L++G + A E+F++ +
Sbjct: 1061 VKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGL 1120
Query: 537 MLARSILSTF 546
+ I F
Sbjct: 1121 AADKEIFDFF 1130
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 125/519 (24%), Positives = 221/519 (42%), Gaps = 60/519 (11%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFN-WASQQPNFTHSPLSYHSILKSLSLSRQIN 101
LR +S V ++ L LA F +S + F HS + +++L + +++
Sbjct: 79 LRREISTDAVVKIFQ--CLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHR 136
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEI--C 157
++LK D + +I + ++AF+V E++ ED G P +
Sbjct: 137 EAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREME---EDFGVAPSLKTH 193
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N +L L G + A+ F E R + S F + I + + Q S+ E
Sbjct: 194 NLVLHGLCKSGKVLAAMDHF-EAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQE--- 249
Query: 218 RENSMINGSVIAV----LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
+ NG I + I++ K K+++EA +++++ C P Y +
Sbjct: 250 ---TTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCK 306
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
MG + E +L+K G P Y I GL E+R EA +L + + S +D
Sbjct: 307 MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVC 366
Query: 334 LNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
ALI +++ G++P S+ VYK +++
Sbjct: 367 YTALI---------------RGLLQTGKIPQASS-------------------VYKTMTS 392
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ D+ + + M+ L +GR+ A + + M+ +GL P+ Y++L+ C+ +
Sbjct: 393 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 452
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A ++ QM + C+ + TYNILI + G++E A F MLE G PD TY L+
Sbjct: 453 ALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 512
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
GLC+ N AA V + D+ +R + S+ + LC+
Sbjct: 513 GLCKAGNTDAACGVLD-----DMSSSRFVYSSLVDGLCK 546
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 173/414 (41%), Gaps = 15/414 (3%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLA 162
S+ ++ N T+D Y I+ L + K Q+A ++ ++ N P I N+LL
Sbjct: 245 SLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITAN--GCTPTIATYNALLN 302
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
L G ++ A+ + ++ G + + I + + + + E+ R ++
Sbjct: 303 GLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLAL 362
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+V +I G + ++ +A V + C PD + + + G +
Sbjct: 363 --DTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVR 420
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSV 341
+ K G+AP Y I GL R++ A E+ + T D N LI G
Sbjct: 421 IFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLC 480
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
S D +A FF+ M+E G P + T + L LCK +D V +S++ +
Sbjct: 481 KSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFV---- 536
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
Y+ +V LC SG+L + EM+R G+ + L+ C+ + + A L++ +
Sbjct: 537 -YSSLVDGLCKSGKLEGGCMLFHEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAI 594
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
G + YN +IS + G++ ++ M + PD TY +LL G+
Sbjct: 595 RKEGMP-HPYAYNSIISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNALLNGM 646
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 163/382 (42%), Gaps = 13/382 (3%)
Query: 86 SYHSILKSL-SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y+++L L + R AID +L+++ N T D Y +I L + K + +A+ +F E
Sbjct: 296 TYNALLNGLCKMGRLEEAID-LLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKE 354
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + +L+ L G I A ++ M+ G + I + +
Sbjct: 355 MASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGR 414
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+G + + + R + V+ +IHG CK ++++ A ++L +++ C PD I Y
Sbjct: 415 IGAAVRIFKSMEAR--GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 472
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
I+ + G V + + G P Y I GL A + + + S
Sbjct: 473 NILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSS 532
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+F V ++L+ G S + F+ M E+ V T + L +LCK N+ DE
Sbjct: 533 SRF-----VYSSLVDGLCKSGKLEGGCMLFHEM-ERSGVANSQTRTRLIFHLCKANRVDE 586
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
V ++ + + +YN ++S L SG++ E V QEM R PD YN+L+
Sbjct: 587 AVSLFNAIR-KEGMPHPYAYNSIISALIKSGKVNEGQAVYQEMTR-WWKPDRVTYNALLN 644
Query: 444 ACCREDLLRPAKKLWDQMFASG 465
+ + A + +M G
Sbjct: 645 GMIGANRMDRAHYYYLEMTGRG 666
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 214/466 (45%), Gaps = 21/466 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY++I+ L +++ +L +++ + +S Y ++ L + ++A + E
Sbjct: 11 VSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGE 70
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+K ++ + ++L++ S G +D +FDEM +G+ + + + I FC+
Sbjct: 71 MKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGL 130
Query: 205 LGQVLSMLDEVRKRENSMINGSVIA-VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ ++L + +R I V +I G CK R +A + D + + +P +
Sbjct: 131 WREATAVLHTMTERG---IQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187
Query: 264 YRIVAEEFKLMGSVFER----EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
Y ++ G + + E +L+K ++L V Y I+GL ++ EA +L
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVS----YNTLIMGLCNNGKLDEAMKLF 243
Query: 320 EVIVSGKFTIDDDVL--NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
++ ++ DV+ N +I G A+ ++ MIE+G L T L
Sbjct: 244 SSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYI 303
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K D+ +E++K + +Y+VM+ C L A G+ MK GL P +
Sbjct: 304 KSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLF 363
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN+LM + C+E L A++L+ +M S C + ++NI+I + G+I A L ++M
Sbjct: 364 DYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDM 423
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
+ G+ PDA TY+S + L + ++ A F D M+A I
Sbjct: 424 QQMGLTPDAYTYSSFINRLSKLGQMEEAKGAF------DSMIASGI 463
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 94/168 (55%)
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
+P + + + + LCK + ++ V++ + + + +Y +++ LC GR+ EA
Sbjct: 7 LPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMR 66
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
++ EMKRKGL+ DV Y++L+ C + L K L+D+M G S N+ Y+ LI+ F
Sbjct: 67 LLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFC 126
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ G A + H M E+G+ PD TYT ++ GLC++ + A ++F+
Sbjct: 127 KKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFD 174
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 157/360 (43%), Gaps = 38/360 (10%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
II+G CK KR+E+A +L E+ C+P+ Y I+ + G V E +L + ++ G
Sbjct: 16 IINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKG 75
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAI 350
+ Y I G + + K L + ++ + + V + LI G R A
Sbjct: 76 LEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREAT 135
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ M E+G P + T + + LCK ++ + ++++ +++ +YNV+++ L
Sbjct: 136 AVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGL 195
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG--CSG 468
C G + +A+ + + M KG +V YN+L+ C L A KL+ + G
Sbjct: 196 CKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEP 255
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEK----------------------------- 499
++ T+N +I + G ++ A+ ++ M+E+
Sbjct: 256 DVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELW 315
Query: 500 ------GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
G+ P +TTY+ +++G C+ L A +F++ + +T M SLC+
Sbjct: 316 KRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKE 375
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 156/394 (39%), Gaps = 5/394 (1%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
+VL + I D Y +I L + +KA +F+ + E+ N L+ L
Sbjct: 136 AVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGL 195
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
+G I +A K+F+ M +G + + I C N KL + + + + + N +
Sbjct: 196 CKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEP 255
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+ +I G CK R+++A ++ D + R + I+ E+ G + + +
Sbjct: 256 DVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELW 315
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSG--KFTIDDDVLNALIGSV 341
K+ KLG+ P + Y I G + AK L + +SG D + L A +
Sbjct: 316 KRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKE 375
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
SS++ A F M E P + + + K E+ + D
Sbjct: 376 SSLE--QARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAY 433
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y+ ++ L G++ EA G M G+ PD Y+SL++ D + L QM
Sbjct: 434 TYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQM 493
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
G +L+ N +++ E + L N
Sbjct: 494 ADMGVILDLEITNSILTFLCNSAEHLHVMELLPN 527
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%)
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
MKR + PD+ YN+++ C+E L A L +M S C N TY IL+ + G
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
+E A+RL M KG+ D Y++L+ G C + L +F++ + + + S
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 546 FMISLCRRVL 555
+ C++ L
Sbjct: 121 LINGFCKKGL 130
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/477 (21%), Positives = 223/477 (46%), Gaps = 15/477 (3%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
++ +++ L + + K V K T D + ++ +L++ ++AF +F +
Sbjct: 68 HNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMH 127
Query: 147 FNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + + P + +++ L DG +D A+++ D M+ G + I + V + C+ +
Sbjct: 128 TSSQCL-PNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGR 186
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE-CKPDFIA 263
+ ++L E+ +R ++ +++G CK +R++EA +++ +L IR C P +
Sbjct: 187 TDKGFTLLQEMTRR--GFQPDVIMYNTLLNGLCKSRRLDEALELV-QLMIRSGCYPTVVT 243
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + E F V +++ + G P +Y I GL + R+ +A+ L + +V
Sbjct: 244 YNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMV 303
Query: 324 SGKFTIDDDVLNALIGSVSS---IDP----RSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+ + D + +I + +D +A M + G P T + + + LC
Sbjct: 304 AARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLC 363
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+ KS + + + + + ++ D+ S+++++ LC S L AY + M + P+
Sbjct: 364 RARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPV 423
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
Y +L++ + + A ++++ M S G + TYN ++ VG IE A+R+ M
Sbjct: 424 AYAALIDGLSKGGEVDKAVRVFELMVESFRPG-VATYNSVLDGLCGVGRIEEAVRMVEGM 482
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ K PD +Y +L+ GLC+ + ++ A+E+F + + + + LC++
Sbjct: 483 IHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKK 539
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 152/349 (43%), Gaps = 42/349 (12%)
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
GQ + + E R N GS +IHG CK ++++A+++LDE+R R
Sbjct: 15 GQAVQLFREERCVPNEFTYGS-----LIHGLCKAGKLDQAYELLDEMRDR---------- 59
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
G+ P + I GL R +A + +
Sbjct: 60 -------------------------GIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGT 94
Query: 326 KFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGR-VPTLSTLSNLSKNLCKRNKSDE 383
K T D N L+ + V S A F M + +P + T + + LCK K D
Sbjct: 95 KCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDR 154
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+E+ +++ ++ +Y+V+V LC +GR + + ++QEM R+G PDV YN+L+
Sbjct: 155 AIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLN 214
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C+ L A +L M SGC + TYN L+ F +++ A RL M E+G P
Sbjct: 215 GLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPP 274
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
D Y +++ GLC++ L A + + V + ST + LC+
Sbjct: 275 DVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCK 323
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 157/371 (42%), Gaps = 40/371 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L +L G A+++F E EF+ +G I C+ KL Q +LDE+R
Sbjct: 2 NCALNLLVRAGQHGQAVQLFREERCVPNEFT---YGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R + G + +I G CK R +A + +C PD I + I+ + G V
Sbjct: 59 R--GIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRV 116
Query: 278 FER-EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
E ++ P Y I GL + ++ A EL
Sbjct: 117 EEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIEL------------------ 158
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ M E G P + T S L + LCK ++D+ + + ++ +
Sbjct: 159 ----------------LDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGF 202
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ YN +++ LC S RL EA ++Q M R G P V YNSLME CR + A +
Sbjct: 203 QPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFR 262
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L M GC ++ YN +I+ ++ A L M+ PD TY+++++GLC
Sbjct: 263 LIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLC 322
Query: 517 QETNLQAAFEV 527
++ + A +++
Sbjct: 323 KDWRVDADWKL 333
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 182/416 (43%), Gaps = 12/416 (2%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
Y +I L + +A+ + +E++ G + N ++ L G +AL F ++
Sbjct: 33 YGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVA 92
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
I F + + ++ ++ + + + + + N V +I+G CK +
Sbjct: 93 GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPN-VVTYTTVINGLCKDGK 151
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
++ A ++LD + C P+ I Y ++ E G + +L++ + G P Y
Sbjct: 152 LDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNT 211
Query: 302 FILGLIVERRICEAKELGEVIV-SGKF--TIDDDVLNALIGSVSSIDPRSAIVFFNFMIE 358
+ GL RR+ EA EL ++++ SG + + + L L +D A M E
Sbjct: 212 LLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVD--RAFRLIQVMSE 269
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR--- 415
+G P + + + LC+ + D+ + K + A D+ +Y+ ++ LC R
Sbjct: 270 RGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDA 329
Query: 416 ---LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
L A +++ MK+ G P+ Y ++E CR + A L +M S +L +
Sbjct: 330 DWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSS 389
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++++I + +++ A ++F M E+ P+ Y +L++GL + + A VF
Sbjct: 390 FSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF 445
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/251 (16%), Positives = 108/251 (43%), Gaps = 13/251 (5%)
Query: 85 LSYHSILKSLSLSRQINA------IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
++Y +I+ L +++A +L+ +K ++ Y +I L + + +Q+A
Sbjct: 312 ITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQA 371
Query: 139 FSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
++ + + ++ P++ + ++ L +D A K+F MS R + + + + I
Sbjct: 372 LALLRRMIDS--EVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALI 429
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
+ ++ + + + + + + S G ++ G C R+EEA ++++ + +E
Sbjct: 430 DGLSKGGEVDKAVRVFELMVE---SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKE 486
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C PD +Y + + V E + + G A Y + L ++R+ +A
Sbjct: 487 CFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAH 546
Query: 317 ELGEVIVSGKF 327
+ ++ +
Sbjct: 547 GVANKLIEAGY 557
>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 809
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/505 (21%), Positives = 212/505 (41%), Gaps = 61/505 (12%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y +++ ++ +S+L++++ D VY +I N KA ++ +E
Sbjct: 290 FAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDE 349
Query: 145 -----VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
VK NC I +S+L L+ G F E G+ F + V +
Sbjct: 350 MVSKGVKTNCV-----ILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDAL 404
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
C+ K+ + + +L E++ ++ M+ + +I G+ +V +A + E++ KP
Sbjct: 405 CKLGKVEEAVELLVEMKGKK--MVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKP 462
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI------- 312
D + Y ++A F G E +L GV P T + I GL + ++
Sbjct: 463 DIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFF 522
Query: 313 ------------------CEAKELGEVIV-------SGKFTIDDDVLNALIGSVSSIDPR 347
CEA + + G+ L S D
Sbjct: 523 DNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSE 582
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A+ M+ PT+ S + L + + ++ V+ +L D+ +Y +M+
Sbjct: 583 KALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMI 642
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR----------------EDLL 451
+ C +++EA+ V+ +MK +G++PDV Y L+ C + E+++
Sbjct: 643 NGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMM 702
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
P+ LW +M ++ Y +LI K + I+ A+ LF+ M+++G+APD TYT+L
Sbjct: 703 DPSA-LWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTAL 761
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDV 536
L G C N++ A +F++ +N +
Sbjct: 762 LSGYCNVGNIKKAVVLFDEMLNKGI 786
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/476 (22%), Positives = 195/476 (40%), Gaps = 63/476 (13%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
SLA +FN ++ ++H P +Y +I++ L +DS+L ++ LD +
Sbjct: 74 SLAFSYFNQL-KESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNL 132
Query: 125 ----------------------IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSL 160
+I + +AF V + K +C P+I CN L
Sbjct: 133 FEALGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTK-HC-GFAPQILSCNFL 190
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
+ L +D A+ ++ ++ G+ + + + I FC L + + + ++ E+
Sbjct: 191 MNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDME--ES 248
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
+ S I G C R + FKVL ++ + D AY +V F + E
Sbjct: 249 GVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEA 308
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
E +L++ K G AP Y I G ++G+
Sbjct: 309 ESILREMEKQGFAPDVYVYCALISGY-----------------------------CMVGN 339
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ A+ + M+ KG LS++ + L + + E+ +K F D
Sbjct: 340 L-----LKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDE 394
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
YNV++ LC G++ EA ++ EMK K + PD+ Y +++ + + A ++ +
Sbjct: 395 ACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYRE 454
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
M G ++ TYN+L FS G + AL L + M +GV PD T+ ++EGLC
Sbjct: 455 MKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLC 510
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/486 (20%), Positives = 209/486 (43%), Gaps = 55/486 (11%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ T + SY + ++ L L + + VL+ V KI +D Y +I
Sbjct: 246 EESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKL 305
Query: 136 QKAFSVFNEVKFNCEDIGPEI---CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
++A S+ E++ + P++ C +L++ G + AL + DEM +GV+ + +
Sbjct: 306 KEAESILREMEK--QGFAPDVYVYC-ALISGYCMVGNLLKALALHDEMVSKGVKTNCVIL 362
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
+ + +V + E +K + +++ CK +VEEA ++L E+
Sbjct: 363 SSILQGLSQMGMASEVANQFKEFKKM--GIFFDEACYNVVMDALCKLGKVEEAVELLVEM 420
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
+ ++ PD I Y V + L G V + + ++ + +G P Y
Sbjct: 421 KGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYN------------ 468
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
+++G F+ N L + A+ N+M +G P T + +
Sbjct: 469 ---------VLAGGFS-----RNGL--------TQEALSLLNYMETQGVKPDTVTHNMII 506
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
+ LC K D+ + L +E+Y+ MV+ C + + +A+ ++ + ++G
Sbjct: 507 EGLCIGGKVDDAQAFFDNLEEKC----LENYSAMVNGYCEANHVNKAFALLIRLSKQGRI 562
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
+ + L+ C E A L + M A + + Y+ +I + GE+E A +
Sbjct: 563 LKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYV 622
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSILSTFMI 548
F+ ++++G+APD TYT ++ G C+ ++ A+ V N+ + DV I T ++
Sbjct: 623 FNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDV-----ITYTVLL 677
Query: 549 SLCRRV 554
+ C ++
Sbjct: 678 NNCSKI 683
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI + + G P T + K C++ E ++V++ + + + SY +
Sbjct: 203 AIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIE 262
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC GR + V+Q++ + DV Y ++ C E L+ A+ + +M G +
Sbjct: 263 GLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAP 322
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ Y LIS + VG + AL L M+ KGV + +S+L+GL Q F
Sbjct: 323 DVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQF 382
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
+ + + + M +LC+
Sbjct: 383 KEFKKMGIFFDEACYNVVMDALCK 406
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 22/211 (10%)
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL------------------VE 386
+P A +FN + E G T + + + LC S +L V
Sbjct: 72 EPSLAFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVN 131
Query: 387 VYKVLS---ANDYFTDM-ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
+++ L AN+ F+ + + + ++ SG +A+ V+ + K G P + N LM
Sbjct: 132 LFEALGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLM 191
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+ A ++ Q+ A G + N TY I I F G + A+ +F +M E GV
Sbjct: 192 NRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVT 251
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
P++ +YT+ +EGLC F+V +N
Sbjct: 252 PNSFSYTTFIEGLCLHGRSDLGFKVLQDVIN 282
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 88/220 (40%), Gaps = 28/220 (12%)
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
N + E + TL+NL RN+ + L + Y D +Y +V LC
Sbjct: 52 NHLFEINTAKVVITLNNL------RNEPSLAFSYFNQLKESGYSHDPYTYAAIVRILCFW 105
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYN----------------------SLMEACCREDLL 451
G R+ ++ E+ +K + D N +L++ C +
Sbjct: 106 GWSRKLDSILMEIIKKDGNLDFGIVNLFEALGDGIANESFSVLVQVSDALIKVCVASGMF 165
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A + Q G + + + N L+++ E +++ A+ ++ + G+ P+ TYT
Sbjct: 166 DQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIA 225
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
++G C++ NL A +VF V +TF+ LC
Sbjct: 226 IKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLC 265
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 188/409 (45%), Gaps = 14/409 (3%)
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
N DI P C +L+ G A K+ + + G I + V I +C+ ++
Sbjct: 133 NVPDIIP--CTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINN 190
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
LS+LD + S+ V I+ C ++++A +VLD + R+C PD I Y I+
Sbjct: 191 ALSVLDRM-----SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTIL 245
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-KELGEVIVSG- 325
E V +L + R G P Y + G+ E R+ EA K L ++ SG
Sbjct: 246 IEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC 305
Query: 326 --KFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ +L ++ + +D A M+ KG P++ T + L LC++
Sbjct: 306 QPNVITHNIILRSMCSTGRWMD---AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+++ + + + + SYN ++ C ++ A ++ M +G PD+ YN+++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
A C++ + A ++ +Q+ + GCS L TYN +I ++ G+ A++L M K + P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
D TY+SL+ GL +E + A + F++ + ++ M+ LC+
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 189/423 (44%), Gaps = 10/423 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALK 175
D Y +I + A SV + + + P++ N++L L G + A++
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMS-----VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ D M R I + + I C ++ +G + +LDE+R R V ++++G
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR--GCTPDVVTYNVLVNG 283
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
CK R++EA K L+++ C+P+ I + I+ G + E +L + G +P
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 343
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFN 354
+ I L + + A ++ E + + N L+ G AI +
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+ +G P + T + + LCK K ++ VE+ LS+ + +YN ++ L +G
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ +A ++ EM+ K L PD Y+SL+ RE + A K + + G N T+N
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFN 523
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
++ + + + A+ M+ +G P+ T+YT L+EGL E + A E+ N+ N
Sbjct: 524 SIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583
Query: 535 DVM 537
+M
Sbjct: 584 GLM 586
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 154/317 (48%), Gaps = 8/317 (2%)
Query: 219 ENSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
EN + +G+V ++ +I GFC+ + +A K+L+ L PD I Y ++ +
Sbjct: 126 ENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKA 185
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G + VL + + V+P Y + L ++ +A E+ + ++ D
Sbjct: 186 GEINNALSVLDR---MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITY 242
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
LI + A+ + M ++G P + T + L +CK + DE ++ + +
Sbjct: 243 TILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ ++ ++N+++ +C++GR +A ++ +M RKG P V +N L+ CR+ LL
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A + ++M GC N +YN L+ F + +++ A+ M+ +G PD TY ++L
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 514 GLCQETNLQAAFEVFNK 530
LC++ ++ A E+ N+
Sbjct: 423 ALCKDGKVEDAVEILNQ 439
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 323 VSGKFTIDD-DVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
V+ F ++D + N L V + + F M+ G VP + + L + C+ K+
Sbjct: 94 VNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKT 153
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+ ++ ++L + D+ +YNVM+S C +G + A V+ M + PDV YN++
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTI 210
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ + C L+ A ++ D+M C ++ TY ILI + A++L M ++G
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGC 270
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFN---------KSVNHDVMLARSILST 545
PD TY L+ G+C+E L A + N + H+++L RS+ ST
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL-RSMCST 322
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 141/315 (44%), Gaps = 10/315 (3%)
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+EE FK L+ + PD I + F +G + +L+ G P Y
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 302 FILGLIVERRICEAKELGEVI-VSGKFTIDDDVL--NALIGSV-SSIDPRSAIVFFNFMI 357
I G C+A E+ + V + ++ DV+ N ++ S+ S + A+ + M+
Sbjct: 178 MISGY------CKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
++ P + T + L + C+ + +++ + D+ +YNV+V+ +C GRL
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
EA + +M G P+V +N ++ + C A+KL M G S ++ T+NILI
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ G + A+ + M + G P++ +Y LL G C+E + A E + V+
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 538 LARSILSTFMISLCR 552
+T + +LC+
Sbjct: 412 PDIVTYNTMLTALCK 426
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
Y ++++ D+ES N + + T G L E + ++ M G PD+ +L+ CR
Sbjct: 91 YSSVNSSFALEDVESNNHLRQMVRT-GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
R A K+ + + SG ++ TYN++IS + + GEI AL + M V+PD T
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVT 206
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHD 535
Y ++L LC L+ A EV ++ + D
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 99/244 (40%), Gaps = 14/244 (5%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQI 100
LR SPS+V I L L + + P P LSY+ +L +++
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 395
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--N 158
+ L+++ D Y ++ +L + + A + N+ + + P + N
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ--LSSKGCSPVLITYN 453
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK- 217
+++ LA G A+K+ DEM + ++ TI + + K+ + + E +
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
R N++ S I+ G CK ++ + A L + R CKP+ +Y I+ E G
Sbjct: 514 GIRPNAVTFNS-----IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEG 568
Query: 276 SVFE 279
E
Sbjct: 569 MAKE 572
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 195/444 (43%), Gaps = 12/444 (2%)
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
L R +A+ ++L+ + + D+ +Y+ +I +L+ +A ++ +E+
Sbjct: 193 LGRARDAL-ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVN 251
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
N ++ L G++ A ++ D M G S + +G + C + + +ML V
Sbjct: 252 TFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRV 311
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ M+N +I G ++ A ++ + + + C PD Y I+ +G
Sbjct: 312 PEVNVVMLN------TVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLG 365
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+L + + G AP Y + +A+ + + + + F+++ N
Sbjct: 366 RCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYN 425
Query: 336 ALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
+I G +D A+ M +G P + T + + +LC ++ DE ++ L
Sbjct: 426 GIIYALGKDGKLD--EAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLL 483
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ +YN ++ L SGR +E + EM G DV YN L++A C+E +
Sbjct: 484 EEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVD 543
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
+ L ++M G N +YN+LI++ + G++ AL L ML +G+ PD TY +L+
Sbjct: 544 RSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI 603
Query: 513 EGLCQETNLQAAFEVFNKSVNHDV 536
GLC+ AA + K N +V
Sbjct: 604 NGLCKVGWTHAALNLLEKLPNENV 627
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 139/304 (45%), Gaps = 7/304 (2%)
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
C+ R +A +L + C PD + Y+ V G V E +L + +G A
Sbjct: 190 LCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAAD 249
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNF 355
N + + +LGL + EA L + ++ T L+ + R A +
Sbjct: 250 VNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRT--RQADEAYAM 307
Query: 356 MIEKGRVPTLST--LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
+ GRVP ++ L+ + + K E+Y+++ + D+ +YN+++ LC
Sbjct: 308 L---GRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKL 364
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
GR A ++ EM+ KG P++ Y++L+ + CR + A+ + DQM A G S N + Y
Sbjct: 365 GRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGY 424
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
N +I + G+++ A+RL M +G PD TY +++ LC + A +F +
Sbjct: 425 NGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLE 484
Query: 534 HDVM 537
V+
Sbjct: 485 EGVV 488
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 191/449 (42%), Gaps = 62/449 (13%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
T S ++Y +L+ L +RQ + ++L +V + + ++V R L +GK +A
Sbjct: 282 TPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRG---CLAEGK-LARATE 337
Query: 141 VFNEVKFNCEDIGPEIC-------NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
++ E +G + C N L+ L G +A++M DEM +G + + +
Sbjct: 338 LY-------EMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYS 390
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSM----INGSVIAVLIIHGFCKGKRVEEAFKVL 249
+ FC N +MLD++ + SM NG II+ K +++EA +++
Sbjct: 391 TLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNG------IIYALGKDGKLDEAMRLV 444
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
E++ + CKPD Y + + E E + + GV Y I L+
Sbjct: 445 QEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHS 504
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
R E L +V +D +V +N +I
Sbjct: 505 GRWQEGLRLANEMVLHGCPLD-------------------VVSYNGLI------------ 533
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
K LCK D + + + + + SYN++++ LC +G++R+A + +EM +
Sbjct: 534 ---KALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQ 590
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
GL PD+ YN+L+ C+ A L +++ ++ TYNILIS +V ++ A
Sbjct: 591 GLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDA 650
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
L + G+ P+ T+ +++ ++
Sbjct: 651 SMLLDKAVSGGIVPNERTWGMMVQNFVRQ 679
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
++ V LC GR R+A +++ M R G PD Y +++ A + + A L D+M
Sbjct: 182 TFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEM 241
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
GC+ ++ T+N ++ +G + A RL M+ G P TY LL GLC+
Sbjct: 242 LLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQA 301
Query: 522 QAAFEVFNKSVNHDVMLARSIL 543
A+ + + +V++ +++
Sbjct: 302 DEAYAMLGRVPEVNVVMLNTVI 323
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 60/151 (39%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
SYN ++S L + +A + + M R + P + A CR R A L M
Sbjct: 147 SYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRGM 206
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
GC + Y +I G + A L ML G A D T+ ++ GLC ++
Sbjct: 207 ARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHV 266
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ A + ++ + H + + LCR
Sbjct: 267 REAARLVDRMMMHGCTPSVVTYGFLLRGLCR 297
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 174/385 (45%), Gaps = 21/385 (5%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+A G +D A ++ M V + I C+ ++G+ LS+LD++
Sbjct: 148 NTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 204
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R V +++ CK +A +VLDE+R + C P+ + Y ++ G V
Sbjct: 205 R--GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 262
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ L + G P T Y + GL +R + +EL ++ ++ + L
Sbjct: 263 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 322
Query: 338 I------GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN-LCKRNKSDELVEVYKV 390
+ G V AI M G +TL N+ N +CK+ + D+ +
Sbjct: 323 VRFFCRGGMVE-----RAIQVLEQMSGHGCAAN-TTLCNIVINTICKQGRVDDAFQFLNN 376
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ + D SY ++ LC + R +A +++EM RK P+ +N+ + C++ L
Sbjct: 377 MGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGL 436
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ A L +QM GC N+ TYN L++ F G ++ AL LF++M K P+ TYT+
Sbjct: 437 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTT 493
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHD 535
LL GLC L AA E+ + + D
Sbjct: 494 LLTGLCNAERLDAAAELLAEMLQKD 518
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 108/487 (22%), Positives = 206/487 (42%), Gaps = 39/487 (8%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y I++ L ++ S+L + Y ++ ++ + +A V +E+
Sbjct: 178 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 237
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ + P I N ++ + +G +D+A + + +S G + T+ + + C
Sbjct: 238 RA--KGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 295
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ V + E+ ++ N M N V +++ FC+G VE A +VL+++ C +
Sbjct: 296 RWEDVEELFAEMMEK-NCMPN-EVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTL 353
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
IV G V + L G +P T Y + GL R +AKEL + +V
Sbjct: 354 CNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMV 413
Query: 324 SGKFTIDDDVLNA----------------LIGSVSSIDPRSAIVFFNFMIE----KGRV- 362
++ N LI +S IV +N ++ +GRV
Sbjct: 414 RKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD 473
Query: 363 ------------PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
P T + L LC + D E+ + D ++ ++NV+VSF
Sbjct: 474 SALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 533
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C G + EA ++++M G P++ YN+L++ ++ A +L + ++G S ++
Sbjct: 534 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDI 593
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TY+ +I S +E A+++FH + + G+ P A Y +L LC+ N A + F
Sbjct: 594 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 653
Query: 531 SVNHDVM 537
V++ M
Sbjct: 654 MVSNGCM 660
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 142/326 (43%), Gaps = 4/326 (1%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I C+ R +A +VL D AY + + G + + + +
Sbjct: 115 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQL---DAARRLIASMP 171
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAI 350
VAP Y I GL R+ EA L + ++ L+ +V S A+
Sbjct: 172 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 231
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ M KG P + T + + +C+ + D+ E LS+ + D SY ++ L
Sbjct: 232 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 291
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C + R + + EM K P+ ++ L+ CR ++ A ++ +QM GC+ N
Sbjct: 292 CAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 351
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
NI+I+ + G ++ A + +NM G +PD +YT++L+GLC+ + A E+ +
Sbjct: 352 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 411
Query: 531 SVNHDVMLARSILSTFMISLCRRVLI 556
V + +TF+ LC++ LI
Sbjct: 412 MVRKNCPPNEVTFNTFICILCQKGLI 437
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/522 (18%), Positives = 206/522 (39%), Gaps = 54/522 (10%)
Query: 30 WTPLLEQTLHQLGLRDSLS--PSLVARVINPYLLTHHSLALG------------FFNWAS 75
+T LLE G ++ + A+ P ++T++ + G F N S
Sbjct: 214 YTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLS 273
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
F +SY ++LK L +++ ++ + ++ + + ++ +G
Sbjct: 274 SY-GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMV 332
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
++A V ++ + +CN ++ + G +D+A + + M G TI +
Sbjct: 333 ERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISY--- 389
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
++ G C+ +R E+A ++L E+ +
Sbjct: 390 ----------------------------------TTVLKGLCRAERWEDAKELLKEMVRK 415
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
C P+ + + G + + +++++ + G Y + G V+ R+ A
Sbjct: 416 NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA 475
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
EL + TI L + + +D +A M++K P + T + L
Sbjct: 476 LELFYSMPCKPNTITYTTLLTGLCNAERLD--AAAELLAEMLQKDCAPNVVTFNVLVSFF 533
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C++ DE +E+ + + + ++ +YN ++ + EA ++ + G+ PD+
Sbjct: 534 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDI 593
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y+S++ RED + A K++ + G YN ++ + +GA+ F
Sbjct: 594 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 653
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
M+ G P+ TY +L+EGL E L+ ++ + + V+
Sbjct: 654 MVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 695
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 33/249 (13%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
S ++ PR+A + +G P + + L +NLC+R ++ + V + + D
Sbjct: 85 SPATTSPRAA-RLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVD 143
Query: 400 MESYNVMVS--------------------------------FLCTSGRLREAYGVIQEMK 427
+ +YN +V+ LC GR+ EA ++ +M
Sbjct: 144 VFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDML 203
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
+G P V Y L+EA C+ A ++ D+M A GC+ N+ TYN++I+ G ++
Sbjct: 204 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 263
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
A + + G PD +YT++L+GLC + E+F + + + M +
Sbjct: 264 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 323
Query: 548 ISLCRRVLI 556
CR ++
Sbjct: 324 RFFCRGGMV 332
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 202/461 (43%), Gaps = 26/461 (5%)
Query: 101 NAIDSVLKQVKVNKITL--DSSVYRFIIPSLIQGKNTQKAFSVF----------NEVKFN 148
N +++ L K+ + L D+ Y +I + K A+ VF NEV +
Sbjct: 209 NVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYT 268
Query: 149 CEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV 208
+L+ L G I+ ALK+F +M+ + + V I+ + + +
Sbjct: 269 ----------NLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEA 318
Query: 209 LSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVA 268
L++ +E++++ N VLI G CK +++EA K+L E+ + P + Y +
Sbjct: 319 LNLFNEMKEK-GCEPNVHTYTVLI-DGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFT 328
+ + G + + +L P T Y E I GL +R++ +A L ++ K +
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436
Query: 329 IDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
N+LI G D SA + M E G VP T S LCK + +E +
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
+ + A + Y ++ C G++ AY +++ M P+ YN L+E C+
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
E ++ A L +M G + TY ILI + + G + AL++F++M+ G PD T
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCT 616
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
YT+ L + L+ +V K +N + +L + T +I
Sbjct: 617 YTAFLHAYFSQGMLEEVDDVIAK-MNEEGILPDLVTYTVLI 656
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 129/565 (22%), Positives = 230/565 (40%), Gaps = 91/565 (16%)
Query: 24 TRPARKWTPLLEQTLHQLGLRDSLSPSLVARV----INPYLLTHHSLALGFFNWASQQPN 79
+RP + P L + L SL+PS V+ + ++P AL FFNW + +P
Sbjct: 49 SRPNWQKHPSLRKLL------PSLTPSHVSSLFAFNLDP------QTALSFFNWIALRPG 96
Query: 80 FTHSPLSYHSILKSL--------------SLSRQINAIDSVLKQVKV-NKITLDSS---- 120
F H+ SY S+L L S+ + +I+ VL ++V K+ D
Sbjct: 97 FKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFK 156
Query: 121 ----VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNAL 174
Y I+ SL + + +V+ E+ N I P I N+++ G + A
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNN--QISPNIYTFNAMVNGYCKIGNVVEAE 214
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML-----DEVRKRENSMINGSVIA 229
++ G+ T + I C N + + ++ E S N
Sbjct: 215 LYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTN----- 269
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+IHG C+ R+ EA K+ ++ C P Y ++ G E + + ++
Sbjct: 270 --LIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKE 327
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSA 349
G P + Y I GL E ++ EA+++
Sbjct: 328 KGCEPNVHTYTVLIDGLCKENKMDEARKM------------------------------- 356
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ M EKG +P++ T + L CK D+ E+ ++ +N + +YN ++
Sbjct: 357 ---LSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICG 413
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC ++ +A ++ +M + L P + YNSL+ C+ + L A +L M +G +
Sbjct: 414 LCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPD 473
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
TY++ I + G +E A LF ++ KGV + YT+L++G C+ + A+ +
Sbjct: 474 QWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLE 533
Query: 530 KSVNHDVMLARSILSTFMI-SLCRR 553
+ +N D L S +I LC+
Sbjct: 534 RMLN-DACLPNSYTYNVLIEGLCKE 557
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 198/455 (43%), Gaps = 33/455 (7%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+ ++ L R+++ ++L ++ K++ Y +I + + + A+ + + +
Sbjct: 406 TYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLM 465
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
N + + L +G ++ A +FD + +GV+ + + + I +C+ K+
Sbjct: 466 NENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKI 525
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
S+L+ R ++ + S ++I G CK K+++EA ++ ++ KP + Y
Sbjct: 526 DVAYSLLE--RMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYT 583
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
I+ E G+ V LG P Y F+ + + +E+ +VI
Sbjct: 584 ILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGML---EEVDDVIAKM 640
Query: 326 KFTIDDDVLNALIGSVSSIDPRS-------AIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
++ +L L+ ID + A F M++ G P+L +S L KNL
Sbjct: 641 N---EEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHE 697
Query: 379 NKSDEL------------------VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
N+ E +++++ + + D+ Y +++ C RL EA
Sbjct: 698 NRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQ 757
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
G++ MK +G+ P YNSL++ CC+ + A +L D M +G L++Y +L+
Sbjct: 758 GLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGL 817
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
G E A +FH +L G D + L++GL
Sbjct: 818 YIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGL 852
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 115/502 (22%), Positives = 201/502 (40%), Gaps = 56/502 (11%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
Q + +SY +++ L + +IN + + + Y +I +L
Sbjct: 257 QKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKV 316
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+A ++FNE+K + L+ L + +D A KM EMS +G+ S + + I
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
+C+ + +LD + NS + +I G CK ++V +A +L+++ R+
Sbjct: 377 DGYCKEGMIDDAFEILDLMES--NSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK 434
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
P I Y + + + +L + G+ P Y FI L E R+ EA
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAG 494
Query: 317 ELGEVIVSGKFTIDDDVLNALIGS---VSSIDPRSAIV-------------FFNFMIEK- 359
L + + + ++ + ALI V ID +++ +N +IE
Sbjct: 495 TLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554
Query: 360 -------------------GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
G PT+ T + L + K D ++V+ + + Y D+
Sbjct: 555 CKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDV 614
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+Y + + G L E VI +M +G+ PD+ Y L++ R L A
Sbjct: 615 CTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKC 674
Query: 461 MFASGCSGNLKTYNILISKFS----------EVG--------EIEGALRLFHNMLEKGVA 502
M +GC +L +ILI S E+G E E AL+LF M+E G
Sbjct: 675 MVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCT 734
Query: 503 PDATTYTSLLEGLCQETNLQAA 524
D + Y +L+ G CQ+ L+ A
Sbjct: 735 IDVSIYGALIAGFCQQERLEEA 756
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 130/580 (22%), Positives = 224/580 (38%), Gaps = 115/580 (19%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL F + + F H+PL+YH +++ L + +++A+ +L Q+K+ +I + ++
Sbjct: 56 ALQHFQYLTNTLAFKHTPLTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVL 115
Query: 127 PSLIQGKNTQKAFSVFNEVK-FNC----------------------------------ED 151
S +A +F +K F C E
Sbjct: 116 NSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEG 175
Query: 152 IGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ P + N LL L +G +D A K+ EMS RG + + + CE+ ++ +
Sbjct: 176 MEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEA- 234
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
EV +R + SV LI G C+ RV E F ++DE+ P+ ++Y V
Sbjct: 235 ---REVARRFGAEGVVSVCNALIC-GLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVIS 290
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV----SG 325
+G V VL K + G P + + + G + R+ E L V+V
Sbjct: 291 WLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRP 350
Query: 326 KFTIDDDVLNALI---------------------------------GSVSSIDPRSAIVF 352
+ + +LN L G V + D + A
Sbjct: 351 NVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEV 410
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
+N M+ G P + +++ LCK + D+ + ++ + + ++N + LC
Sbjct: 411 WNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCC 470
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
GR+ A V+ +M+R G PD YN L++ + L+ A +L ++ NL T
Sbjct: 471 GGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVT 530
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT------------------------- 507
YN ++ FS G+ E L++ ML GV PDA T
Sbjct: 531 YNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRIT 590
Query: 508 -----------YTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+TSLL G+C ++ A NK +N +
Sbjct: 591 AGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGI 630
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 127/297 (42%), Gaps = 9/297 (3%)
Query: 87 YHSILKSLSLSRQI-NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
Y+++L L S + A+D + K + + Y ++ ++ + Q A V+N++
Sbjct: 355 YNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKM 414
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
NC + P + S++ VL + D A ++ D M+ G + + F FI C
Sbjct: 415 -VNC-GVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGG 472
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
++ + ++D++++ + + ++ G ++EA +++ EL R+ + + +
Sbjct: 473 RVLWAMRVVDQMQRY--GCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVT 530
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y V F G VL + GV P I ++ A + + I
Sbjct: 531 YNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRIT 590
Query: 324 SGKFTIDDDVLNA--LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+GK D + + L G +S+ AIV+ N M+ KG P ++T L + K+
Sbjct: 591 AGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFKK 647
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 98/229 (42%), Gaps = 7/229 (3%)
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R N ++ S++ VL CK ++A++++D + C P + + + G V
Sbjct: 420 RPNVVVYTSMVDVL-----CKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRV 474
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
V+ + ++ G P T Y E + GL + EA EL + K ++ N +
Sbjct: 475 LWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTV 534
Query: 338 IGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY-KVLSAND 395
+ SS ++ M+ G P T++ + K K ++ ++ + +
Sbjct: 535 MYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKE 594
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
D+ ++ ++ +C S + EA + +M KG+ P+++ ++ L+
Sbjct: 595 LCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRG 643
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/501 (23%), Positives = 225/501 (44%), Gaps = 52/501 (10%)
Query: 81 THSPLSYHSI-LKSLSLSRQINAIDSVLKQVKVNKITLDSS---VYRFIIPSLIQGKNTQ 136
+H+P S S+ L +++ + +I V ++ V + L +Y +I + + K
Sbjct: 79 SHAPNSKPSLQLLKETINSGVYSIREVFNELGVARGVLGIKTYVLYDLLIRACCELKRGD 138
Query: 137 KAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
AF F+ +K + + P + CN +L++ + A ++ EM ++ S + F +
Sbjct: 139 DAFECFDMMK--GKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNI 196
Query: 195 FIWKFCENAKLGQV---LSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
I C+ KL + + +++ + + N + + IIHG+C RVE A + D
Sbjct: 197 MINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNT-----IIHGYCSRGRVEGARMIFDL 251
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
++ R KPD Y G + E +L+K +++G+ P Y I G +
Sbjct: 252 MKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGN 311
Query: 312 I--------------------------------CEAKELGEVI--VSGKFTIDDDV-LNA 336
+ C+ E +I +S K + D V N
Sbjct: 312 LEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNI 371
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G + + A + MI KG PT T ++L L KR + + ++++ +
Sbjct: 372 LINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKG 431
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
F D+ +N ++ C +G + A+ +++EM + + PD +N+LM+ CRE + A+
Sbjct: 432 IFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAAR 491
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L ++M + G + +YN LIS +S+ G+++ A R+ ML G P TY +L++GL
Sbjct: 492 ELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGL 551
Query: 516 CQETNLQAAFEVFNKSVNHDV 536
C+ A ++ + ++ +
Sbjct: 552 CKNEEGDHAEQLLKEMISKGI 572
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 164/359 (45%), Gaps = 3/359 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++ S G ++ A +FD M RGV+ + +G FI C+ KL + ML++++
Sbjct: 230 NTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMK- 288
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E + +V +I G+C +E AF D++ P Y ++ L +
Sbjct: 289 -EIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKM 347
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E + ++K+ + G+ P + Y I G + +A L + ++S +L
Sbjct: 348 DEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSL 407
Query: 338 IGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I +S + A F ++ KG P L + L C D + K +
Sbjct: 408 IYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKV 467
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D ++N ++ C G++ A +I+EMK +G+ PD YN+L+ + ++ A +
Sbjct: 468 VPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFR 527
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ D+M + G + L TYN LI + E + A +L M+ KG+ P+ TY SL+EG+
Sbjct: 528 VRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+ A F M G P + T + + C R + + ++ ++ D +Y
Sbjct: 208 KKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSF 267
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+S +C G+L EA G++++MK GL P YN+L++ C + L A D+M G
Sbjct: 268 ISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGL 327
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ TYN+LI +++ A + M EKG+ PD+ TY L+ G C+ N++ AF
Sbjct: 328 MPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFT 387
Query: 527 VFNKSVNHDVMLARSILSTFMISLCRR 553
+ ++ ++ + R ++ + L +R
Sbjct: 388 LHDEMISKGIQPTRVTYTSLIYVLSKR 414
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 102/198 (51%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F+ M KG +P + +++ K N++++ +Y + + + ++N+M++ LC
Sbjct: 144 FDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCK 203
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G+L++A I M+ G+ P+V YN+++ C + A+ ++D M G + T
Sbjct: 204 EGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYT 263
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
Y IS + G++E A + M E G+ P A TY +L++G C + NL+ AF+ +K V
Sbjct: 264 YGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMV 323
Query: 533 NHDVMLARSILSTFMISL 550
+M S + + +L
Sbjct: 324 REGLMPTVSTYNMLIHAL 341
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 143/303 (47%), Gaps = 17/303 (5%)
Query: 56 INPYLLTHHSLALGFFNWASQQPNFTH-----------SPLSYHSILKSLSLSRQINAID 104
+ P +T+++L G+ N + + F + + +Y+ ++ +L L +++ D
Sbjct: 292 LRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEAD 351
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLA 162
++K++ + DS Y +I + N +KAF++ +E+ + I P SL+
Sbjct: 352 GIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMI--SKGIQPTRVTYTSLIY 409
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
VL+ G + A +F+++ +G+ I F I C N + + +ML E+ + + +
Sbjct: 410 VLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMK--V 467
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+ V ++ G C+ +VE A ++++E++ R KPD I+Y + + G + +
Sbjct: 468 VPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFR 527
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
V + +G P Y I GL A++L + ++S T +D+ +LI +
Sbjct: 528 VRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIG 587
Query: 343 SID 345
+++
Sbjct: 588 NVE 590
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 68/150 (45%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y++++ C R +A+ MK KG+ P V N ++ + + A L+ +MF
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
++ T+NI+I+ + G+++ A M G+ P+ TY +++ G C ++
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVE 243
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A +F+ V +F+ +C+
Sbjct: 244 GARMIFDLMKCRGVKPDSYTYGSFISGMCK 273
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 169/379 (44%), Gaps = 36/379 (9%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++ +S G I+ A ++ D M +G+E + +G I C+ +L + + D++
Sbjct: 212 NTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV- 270
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E ++ +V +I G+C +E AF DE+ + P Y ++ + G +
Sbjct: 271 -EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRM 329
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E + ++K+ RK G+ P Y I G R AK
Sbjct: 330 GEADDMIKEMRKKGIIPDAITYNILINGY---SRCGNAKR-------------------- 366
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
A N M+ KG PT T ++L L +RN+ E ++++ +
Sbjct: 367 -----------AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVS 415
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D+ +N M+ C +G + A+ +++EM RK + PD +N+LM+ CRE + A+ L
Sbjct: 416 PDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARML 475
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
D+M G + +YN LIS + G+I+ A + ML G P TY +L++ LC+
Sbjct: 476 LDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCK 535
Query: 518 ETNLQAAFEVFNKSVNHDV 536
A E+ + VN +
Sbjct: 536 NQEGDLAEELLKEMVNKGI 554
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 127/296 (42%), Gaps = 36/296 (12%)
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
KP+ ++Y + + G++ +L R G+ P + Y I G+ E R+ EA
Sbjct: 205 KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASG 264
Query: 318 LGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
L + +V + N LI G + D A + + M++KG +P++ST
Sbjct: 265 LFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVST--------- 315
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
YN++V L GR+ EA +I+EM++KG+ PD
Sbjct: 316 --------------------------YNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 349
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN L+ R + A L ++M + G TY LI S ++ A LF +
Sbjct: 350 TYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 409
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L++GV+PD + ++++G C N++ AF + + V +T M CR
Sbjct: 410 LDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCR 465
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 166/417 (39%), Gaps = 42/417 (10%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
+GF +PN +SY++I+ S I +L ++V I DS Y
Sbjct: 196 IGFMEGLGFKPNV----VSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY----- 246
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
SL++ + +G ++ A +FD+M G+
Sbjct: 247 ------------------------------GSLISGMCKEGRLEEASGLFDKMVEIGLVP 276
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
+ + + I +C L + S DE+ K+ ++ L++H R+ EA
Sbjct: 277 NAVTYNTLIDGYCNKGDLERAFSYRDEMVKK--GIMPSVSTYNLLVHALFMEGRMGEADD 334
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
++ E+R + PD I Y I+ + G+ + + G+ P Y I L
Sbjct: 335 MIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLS 394
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
R+ EA +L E I+ + D + NA+I G ++ + A + M K P
Sbjct: 395 RRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEV 454
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T + L + C+ K +E + + D SYN ++S G +++A+ V EM
Sbjct: 455 TFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEM 514
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
G +P + YN+L++ C+ A++L +M G S + TY LI V
Sbjct: 515 LSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 571
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 120/276 (43%), Gaps = 16/276 (5%)
Query: 294 PRTNDYREFILGLIVERRICEAK---ELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
P D + + L +++ R+ K +L + ++ + + ++ + L S + +S+I
Sbjct: 121 PHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMETRIATNRELFDELTLSRDRLSVKSSI 180
Query: 351 VF-------------FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
VF FM G P + + + + R + + +
Sbjct: 181 VFDLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE 240
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D +Y ++S +C GRL EA G+ +M GL P+ YN+L++ C + L A
Sbjct: 241 PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSY 300
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
D+M G ++ TYN+L+ G + A + M +KG+ PDA TY L+ G +
Sbjct: 301 RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 360
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
N + AF++ N+ ++ + ++ + L RR
Sbjct: 361 CGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRR 396
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 136/299 (45%), Gaps = 13/299 (4%)
Query: 58 PYLLTHHSLALGFFNWASQQPNFTH-----------SPLSYHSILKSLSLSRQINAIDSV 106
P +T+++L G+ N + F++ S +Y+ ++ +L + ++ D +
Sbjct: 276 PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDM 335
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLAS 166
+K+++ I D+ Y +I + N ++AF + NE+ + SL+ VL+
Sbjct: 336 IKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSR 395
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
+ A +F+++ +GV I F I C N + + +L E+ ++ S+
Sbjct: 396 RNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRK--SVPPDE 453
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
V ++ G C+ +VEEA +LDE++ R KPD I+Y + + G + + V +
Sbjct: 454 VTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDE 513
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID 345
+G P Y I L + A+EL + +V+ + DD +LI + ++D
Sbjct: 514 MLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVD 572
>gi|357140804|ref|XP_003571953.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Brachypodium distachyon]
Length = 926
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/472 (22%), Positives = 220/472 (46%), Gaps = 19/472 (4%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y S++ + +R+ D + + N + LD + ++ L Q + A VFN ++
Sbjct: 151 YKSLVFTYCKARRSLEADEMCCLMVKNGMYLDRMLGTALVKGLCQEGRLELAMDVFNRMR 210
Query: 147 FN-CEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
N + +++ L GY+D+ +++ EM RG+E + + + V +W +C+N +
Sbjct: 211 VNEGAQLDAYAYTTMIGGLFEHGYVDHGWELYQEMKDRGMEPTPVTYNVMMWWYCKNKWV 270
Query: 206 GQVLSMLDEVRKRENSMINGSV-----IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
G + + N M+ G V +++ CK ++ EA ++ ++ R PD
Sbjct: 271 GAAMELY-------NVMVRGGVSPDLRCYTMLMTSLCKEGKLVEAEQLFTKMLERGVFPD 323
Query: 261 FIAYRIVAEEF-KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
+ + +A F K VF R+ LK KL + + G EA+ L
Sbjct: 324 HVLFISIARFFPKGWEVVFVRKA-LKAVAKLDCSGELLELSSLASGCSNMSLQQEAERLL 382
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFF--NFMIEKGRVPTLSTLSNLSKNLCK 377
+ ++ D +LN +I ++ S + R + ++ + ++ G P++ T + + K LC+
Sbjct: 383 DEMMRSNLLPIDAILNMMIIAMCS-EGRLDVSYYLLDKLVAYGYEPSVLTYNIVIKYLCR 441
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ + D+ + ++ + DM + ++MV+ C G + A + EM + GL+P ++
Sbjct: 442 QKRMDDARTLINLMQSRGVRPDMSTNSIMVTAYCKIGDIESALSLFDEMAKDGLEPSIAV 501
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
Y+S++ CR + A+ QM +G + Y L++ +S + + A R+F ML
Sbjct: 502 YDSIIACLCRLGHFKEAEFTLRQMIEAGLVPDEVIYTTLLNGYSTMRHTKAACRVFDEML 561
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
E+G+ P + Y +L+ GL ++ ++ A + + ++++ T +I+
Sbjct: 562 ERGLQPGSHAYGALINGLVKDNKIRKALHYLERMLEEGFA-TQTVIYTMLIN 612
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 173/404 (42%), Gaps = 22/404 (5%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ L S G +D A +FD M G+ + ++ +C+ + + M + K
Sbjct: 119 LIHGLCSKGAVDKARFLFDVMLGLGLAPPVRVYKSLVFTYCKARRSLEADEMCCLMVK-- 176
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE-CKPDFIAYRIVAEEFKLMGSVF 278
N M ++ ++ G C+ R+E A V + +R+ E + D AY ++G +F
Sbjct: 177 NGMYLDRMLGTALVKGLCQEGRLELAMDVFNRMRVNEGAQLDAYAYT------TMIGGLF 230
Query: 279 EREVV------LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
E V ++ + G+ P Y + + + A EL V+V G + D
Sbjct: 231 EHGYVDHGWELYQEMKDRGMEPTPVTYNVMMWWYCKNKWVGAAMELYNVMVRGGVSPDLR 290
Query: 333 VLNALIGSVSSIDPR-SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
L+ S+ A F M+E+G P ++++ K E+V V K L
Sbjct: 291 CYTMLMTSLCKEGKLVEAEQLFTKMLERGVFPDHVLFISIARFF---PKGWEVVFVRKAL 347
Query: 392 SAN---DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
A D ++ + + S +EA ++ EM R L P + N ++ A C E
Sbjct: 348 KAVAKLDCSGELLELSSLASGCSNMSLQQEAERLLDEMMRSNLLPIDAILNMMIIAMCSE 407
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
L + L D++ A G ++ TYNI+I ++ A L + M +GV PD +T
Sbjct: 408 GRLDVSYYLLDKLVAYGYEPSVLTYNIVIKYLCRQKRMDDARTLINLMQSRGVRPDMSTN 467
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ ++ C+ ++++A +F++ + + ++ + + LCR
Sbjct: 468 SIMVTAYCKIGDIESALSLFDEMAKDGLEPSIAVYDSIIACLCR 511
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 98/504 (19%), Positives = 204/504 (40%), Gaps = 66/504 (13%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
+ S L+Y+ ++K L ++++ +++ ++ + D S ++ + + + + A
Sbjct: 424 GYEPSVLTYNIVIKYLCRQKRMDDARTLINLMQSRGVRPDMSTNSIMVTAYCKIGDIESA 483
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNA------------------------- 173
S+F+E+ + + + +S++A L G+ A
Sbjct: 484 LSLFDEMAKDGLEPSIAVYDSIIACLCRLGHFKEAEFTLRQMIEAGLVPDEVIYTTLLNG 543
Query: 174 ----------LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
++FDEM RG++ + +G I ++ K+ + L L+ R E
Sbjct: 544 YSTMRHTKAACRVFDEMLERGLQPGSHAYGALINGLVKDNKIRKALHYLE--RMLEEGFA 601
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
+VI ++I+ F + ++D + +PD I Y + + R +
Sbjct: 602 TQTVIYTMLINQFFRKGEEWLGLDLVDLMMKNHVEPDLITYGALV-------TGICRNID 654
Query: 284 LKKKRKLGVAPRTNDYREFILGLI------------------VERRICEAKELGEVIVSG 325
+ R +A + ++ R + L+ E +I A+ + + +V
Sbjct: 655 RRDMRP-SLAAKLDEARYMLFRLLPQISFGTRKGKQKKKRMSSEEKIDLAQNIIQDLVES 713
Query: 326 KFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
D + N ++ G + A + M + G +P T + L N + S+
Sbjct: 714 GMMPDLHIYNGMLNGLCRAQKMDDAYNLLSLMEQSGVLPNHVTYTILMNNDIRLGDSNRA 773
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
++++ L+++ + D YN + L + R +EA M+++G P + Y+ +ME
Sbjct: 774 IQLFNSLNSDGHVFDDVVYNTFIKGLSLARRTKEALSFFLMMQKRGFVPSKAAYDKIMEQ 833
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
E+ A ++D MF G Y+ L+ ++ + R+F MLEKG + D
Sbjct: 834 LLAENSTDLALNIFDDMFCHGYIPRYSNYSSLLLVLAKDNQWREVDRVFMMMLEKGRSLD 893
Query: 505 ATTYTSLLEGLC-QETNLQAAFEV 527
T LLE LC ++ L AFE+
Sbjct: 894 TET-KKLLEELCYKQGELDLAFEL 916
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 188/446 (42%), Gaps = 19/446 (4%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLA--SDGYIDNALKMFD 178
Y +I L + K A ++ N ++ + P++ + + V A G I++AL +FD
Sbjct: 431 TYNIVIKYLCRQKRMDDARTLINLMQ--SRGVRPDMSTNSIMVTAYCKIGDIESALSLFD 488
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR-ENSMINGSVIAVLIIHGFC 237
EM+ G+E S + I C +LG +R+ E ++ VI +++G+
Sbjct: 489 EMAKDGLEPSIAVYDSIIACLC---RLGHFKEAEFTLRQMIEAGLVPDEVIYTTLLNGYS 545
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
+ + A +V DE+ R +P AY + + + L++ + G A +T
Sbjct: 546 TMRHTKAACRVFDEMLERGLQPGSHAYGALINGLVKDNKIRKALHYLERMLEEGFATQTV 605
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFM 356
Y I + +L ++++ D AL+ G +ID R
Sbjct: 606 IYTMLINQFFRKGEEWLGLDLVDLMMKNHVEPDLITYGALVTGICRNIDRRDMRPSLAAK 665
Query: 357 IEKGR------VPTLSTLSNLSKNLCKRNKSDELVE----VYKVLSANDYFTDMESYNVM 406
+++ R +P +S + K KR S+E ++ + + L + D+ YN M
Sbjct: 666 LDEARYMLFRLLPQISFGTRKGKQKKKRMSSEEKIDLAQNIIQDLVESGMMPDLHIYNGM 725
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
++ LC + ++ +AY ++ M++ G+ P+ Y LM R A +L++ + + G
Sbjct: 726 LNGLCRAQKMDDAYNLLSLMEQSGVLPNHVTYTILMNNDIRLGDSNRAIQLFNSLNSDGH 785
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ YN I S + AL F M ++G P Y ++E L E + A
Sbjct: 786 VFDDVVYNTFIKGLSLARRTKEALSFFLMMQKRGFVPSKAAYDKIMEQLLAENSTDLALN 845
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+F+ H + S S+ ++ L +
Sbjct: 846 IFDDMFCHGYIPRYSNYSSLLLVLAK 871
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/472 (19%), Positives = 190/472 (40%), Gaps = 45/472 (9%)
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNK-ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
+++K L ++ V +++VN+ LD+ Y +I L + + ++ E+K
Sbjct: 188 ALVKGLCQEGRLELAMDVFNRMRVNEGAQLDAYAYTTMIGGLFEHGYVDHGWELYQEMKD 247
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
+ P N ++ + ++ A+++++ M GV + + + C+ KL +
Sbjct: 248 RGMEPTPVTYNVMMWWYCKNKWVGAAMELYNVMVRGGVSPDLRCYTMLMTSLCKEGKLVE 307
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
+ ++ +R + V+ + I F KG V K L + +C + + +
Sbjct: 308 AEQLFTKMLER--GVFPDHVLFISIARFFPKGWEVVFVRKALKAVAKLDCSGELLELSSL 365
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
A M E E +L + + + P I+ + E R+ + L + +V+ +
Sbjct: 366 ASGCSNMSLQQEAERLLDEMMRSNLLPIDAILNMMIIAMCSEGRLDVSYYLLDKLVAYGY 425
Query: 328 TIDDDVLNALIGSVSSI----DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
N +I + D R+ I N M +G P +ST S + CK +
Sbjct: 426 EPSVLTYNIVIKYLCRQKRMDDARTLI---NLMQSRGVRPDMSTNSIMVTAYCKIGDIES 482
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM- 442
+ ++ ++ + + Y+ +++ LC G +EA +++M GL PD Y +L+
Sbjct: 483 ALSLFDEMAKDGLEPSIAVYDSIIACLCRLGHFKEAEFTLRQMIEAGLVPDEVIYTTLLN 542
Query: 443 --------EACCR--------------------------EDLLRPAKKLWDQMFASGCSG 468
+A CR ++ +R A ++M G +
Sbjct: 543 GYSTMRHTKAACRVFDEMLERGLQPGSHAYGALINGLVKDNKIRKALHYLERMLEEGFAT 602
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
Y +LI++F GE L L M++ V PD TY +L+ G+C+ +
Sbjct: 603 QTVIYTMLINQFFRKGEEWLGLDLVDLMMKNHVEPDLITYGALVTGICRNID 654
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 107/260 (41%), Gaps = 37/260 (14%)
Query: 330 DDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
D + +AL+ S + + SA+ F+ +IE VP+ ++ + L + +C + E+V+++
Sbjct: 42 DPALSDALVACHSHLGNIASALTCFDHLIESRYVPSPASSAALLRAMCAASMYSEVVDLF 101
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM------ 442
+ + + ++ LC+ G + +A + M GL P V Y SL+
Sbjct: 102 VLWEGAPSPLPVSKFPFLIHGLCSKGAVDKARFLFDVMLGLGLAPPVRVYKSLVFTYCKA 161
Query: 443 -------EAC----------------------CREDLLRPAKKLWDQMFAS-GCSGNLKT 472
E C C+E L A ++++M + G +
Sbjct: 162 RRSLEADEMCCLMVKNGMYLDRMLGTALVKGLCQEGRLELAMDVFNRMRVNEGAQLDAYA 221
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
Y +I E G ++ L+ M ++G+ P TY ++ C+ + AA E++N V
Sbjct: 222 YTTMIGGLFEHGYVDHGWELYQEMKDRGMEPTPVTYNVMMWWYCKNKWVGAAMELYNVMV 281
Query: 533 NHDVMLARSILSTFMISLCR 552
V + M SLC+
Sbjct: 282 RGGVSPDLRCYTMLMTSLCK 301
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 83/426 (19%), Positives = 161/426 (37%), Gaps = 58/426 (13%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y SI+ L + L+Q+ + D +Y ++ ++T+ A VF+E+
Sbjct: 502 YDSIIACLCRLGHFKEAEFTLRQMIEAGLVPDEVIYTTLLNGYSTMRHTKAACRVFDEML 561
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
G +L+ L D I AL + M G T+ + + I +F +
Sbjct: 562 ERGLQPGSHAYGALINGLVKDNKIRKALHYLERMLEEGFATQTVIYTMLINQFFRKGEEW 621
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCK-----------GKRVEEA----FKVLDE 251
L ++D + K N + + ++ G C+ +++EA F++L +
Sbjct: 622 LGLDLVDLMMK--NHVEPDLITYGALVTGICRNIDRRDMRPSLAAKLDEARYMLFRLLPQ 679
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ K R+ +EE + + +++ + G+ P + Y + GL ++
Sbjct: 680 ISFGTRKGKQKKKRMSSEE-----KIDLAQNIIQDLVESGMMPDLHIYNGMLNGLCRAQK 734
Query: 312 ICEAKELGEVI-VSG------KFTI----------------------------DDDVLNA 336
+ +A L ++ SG +TI DD V N
Sbjct: 735 MDDAYNLLSLMEQSGVLPNHVTYTILMNNDIRLGDSNRAIQLFNSLNSDGHVFDDVVYNT 794
Query: 337 LIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
I +S + + A+ FF M ++G VP+ + + + L N +D + ++ + +
Sbjct: 795 FIKGLSLARRTKEALSFFLMMQKRGFVPSKAAYDKIMEQLLAENSTDLALNIFDDMFCHG 854
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
Y +Y+ ++ L + RE V M KG D L E C ++ L A
Sbjct: 855 YIPRYSNYSSLLLVLAKDNQWREVDRVFMMMLEKGRSLDTETKKLLEELCYKQGELDLAF 914
Query: 456 KLWDQM 461
+L M
Sbjct: 915 ELEGNM 920
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/492 (22%), Positives = 211/492 (42%), Gaps = 39/492 (7%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSR-----------QINAIDSV--------- 106
AL FF W +++ F H+ S+ ++L LS R +N D+
Sbjct: 73 ALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVSADA 132
Query: 107 ---LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLL 161
+++ ++ L Y F + SL + T+ V++++ + + P+ N+++
Sbjct: 133 IQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQ--DGLLPDTVTYNTMI 190
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM-----LDEVR 216
+G + A + F + G+E T + +C +L + + L +
Sbjct: 191 KSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQ 250
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+ E S ++I G C+ K V EA + ++ C P+ A+ + G
Sbjct: 251 RNEYSY-------TILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGR 303
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
V + ++ + GV P Y I+G R+ +A ++ E++ DD N
Sbjct: 304 VGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNT 363
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
LI + A N +++G PT+ T +NL C K D+ + + + ++
Sbjct: 364 LIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKC 423
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D++ + +++ L RL+EA ++ E+ GL P+V Y S+++ C+ + A +
Sbjct: 424 KLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALE 483
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ M GC N TYN L+ + ++ A+ L M + G+ P+ TYT+LL+G C
Sbjct: 484 VLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC 543
Query: 517 QETNLQAAFEVF 528
E + AF +F
Sbjct: 544 DEHDFDNAFRLF 555
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 192/462 (41%), Gaps = 9/462 (1%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
A Q S ++Y++++ S ++N + + ++ N D Y +I L K
Sbjct: 313 AMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK 372
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+ + N VK E P + +L+ D+AL+M ++M +
Sbjct: 373 TEEAEELLNNAVK---EGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 429
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
FG I + +L + +L+E+ N ++ + II G+CK +V+ A +VL
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISA--NGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 487
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ C+P+ Y + + + +L K +K G+ P Y + G E
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 547
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
A L E++ D+ L ++ A ++F++ KG T + L
Sbjct: 548 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG--RAEEAYSFIVRKGVALTKVYYTTL 605
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
K +D + + + D +Y+V++ LC RL EA ++ +M +G+
Sbjct: 606 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 665
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
+ Y L++ RE AK+++++M +SG + TY + I+ + + G +E A
Sbjct: 666 KCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAED 725
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
L M +GVAPD TY L++G + AF + V
Sbjct: 726 LILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVG 767
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 109/498 (21%), Positives = 202/498 (40%), Gaps = 59/498 (11%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y SI+ S +++ VLK ++ + ++ Y ++ L++ K KA ++
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALL-- 520
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
K + I P + +LL + DNA ++F+ M G++ + V C+
Sbjct: 521 TKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA 580
Query: 203 AKLGQVLS----------------MLDEVRKRENSMINGSVIAVLI-------------- 232
+ + S ++D K N+ ++I +I
Sbjct: 581 GRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVL 640
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
+H CK KR+ EA +LD++ +R K AY I+ +E G + + + G
Sbjct: 641 LHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH 700
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALI---GSVSSIDPR 347
P Y FI E R+ +A++L ++ + + DV+ N LI G + ID
Sbjct: 701 KPSATTYTVFINSYCKEGRLEDAEDL--ILKMEREGVAPDVVTYNILIDGCGHMGYID-- 756
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN----KSDELVEVYKVLSANDYFTDME-- 401
A M+ P T L K+L K N +S + ++ ++ + + +E
Sbjct: 757 RAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERM 816
Query: 402 ----------SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+Y+ +++ C +GRL EA ++ M KGL P+ Y L++ CC
Sbjct: 817 VKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFF 876
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A M G L++Y +L+ G+ E LF ++LE G D + L
Sbjct: 877 EKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKIL 936
Query: 512 LEGLCQETNLQAAFEVFN 529
+GL + + F++ +
Sbjct: 937 NDGLLKAGYVDICFQMLS 954
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/517 (19%), Positives = 217/517 (41%), Gaps = 34/517 (6%)
Query: 56 INPYLLTHHSLALGFFNWASQQPN---FTHSPL--------SYHSILKSLSLSRQINAID 104
+ P T ++L LG+ + F PL SY +++ L ++ +
Sbjct: 214 LEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREAL 273
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLA 162
+ +K + + + + F+I L + A +F+ + N + P + N+++
Sbjct: 274 VLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQN--GVVPSVMTYNAMIV 331
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
+ G +++ALK+ + M G + I+ C+ K + +L+ K
Sbjct: 332 GYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKE--GF 388
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
V +I+G+C ++ ++A ++ +++ +CK D + KL+ S+ +++
Sbjct: 389 TPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFG------KLINSLIKKDR 442
Query: 283 VLKKKRKL------GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ + K L G+ P Y I G ++ A E+ +++ + N+
Sbjct: 443 LKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS 502
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
L+ G V A+ M + G +P + T + L + C + D +++++ N
Sbjct: 503 LMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNG 562
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D +Y V+ LC +GR EAY I RKG+ +Y +L++ + A
Sbjct: 563 LKPDEHAYAVLTDALCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAA 619
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L ++M GC+ + TY++L+ + + AL + M +G+ YT L++ +
Sbjct: 620 TLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEM 679
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+E A ++N+ + + + + F+ S C+
Sbjct: 680 LREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCK 716
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/441 (20%), Positives = 180/441 (40%), Gaps = 43/441 (9%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+ FT + +++ +++ ++ + + + ++ +K LD V+ +I SLI+ +
Sbjct: 385 KEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLK 444
Query: 137 KAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+A + NE+ N + P + S++ G +D AL++ M G + + +
Sbjct: 445 EAKELLNEISAN--GLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS 502
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
++ ++ KL + +++L +++K + +I + ++ G C + AF++ + +
Sbjct: 503 LMYGLVKDKKLHKAMALLTKMQK--DGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 560
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
KPD AY ++ + G E + +K GVA Y I G
Sbjct: 561 NGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK---GVALTKVYYTTLIDGF-------- 609
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+ D A MI++G P T S L
Sbjct: 610 ------------------------SKAGNTD--FAATLIERMIDEGCTPDSYTYSVLLHA 643
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK+ + +E + + +S + +Y +++ + G+ A + EM G P
Sbjct: 644 LCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPS 703
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+ Y + + C+E L A+ L +M G + ++ TYNILI +G I+ A
Sbjct: 704 ATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLK 763
Query: 495 NMLEKGVAPDATTYTSLLEGL 515
M+ P+ TY LL+ L
Sbjct: 764 RMVGASCEPNYWTYCLLLKHL 784
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 123/281 (43%), Gaps = 8/281 (2%)
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
MG V+ + V + G+ P T Y I E + A +++ G +
Sbjct: 167 MGRVYSQLV------QDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFT 220
Query: 334 LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
NAL+ G + + R A F M G + + L + LC+ E + ++ ++
Sbjct: 221 CNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMK 280
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ ++ ++ ++S LC SGR+ +A + M + G+ P V YN+++ + +
Sbjct: 281 RDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMN 340
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A K+ + M +GC + TYN LI + + E A L +N +++G P T+T+L+
Sbjct: 341 DALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLI 399
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
G C A + NK ++ L + + SL ++
Sbjct: 400 NGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKK 440
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/477 (22%), Positives = 213/477 (44%), Gaps = 5/477 (1%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N T ++ IL SL S+ + + + ++++ I + +I Q A
Sbjct: 80 NTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFA 139
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
FSVF ++ +L+ L G I A D++ G F I +G I
Sbjct: 140 FSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHG 199
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIREC 257
C K+G+ + LD +++ + +++ +V+ II CK K V EAF + E+ +
Sbjct: 200 LC---KVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGI 256
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
PD + Y + F ++G + + + K + P + + + ++ E K
Sbjct: 257 SPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKT 316
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+ ++++ + N+L+ + + A FN M + G P + + S + C
Sbjct: 317 VFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFC 376
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K K DE + ++K + + D+ +Y+ ++ L SGR+ A ++ +M +G+ P +
Sbjct: 377 KIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIR 436
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YNS+++A C+ + A L ++ G N+ TY+ILI + G++E A ++F +
Sbjct: 437 TYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGL 496
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
L KG + TYT +++G C E A + +K ++ + ++SL ++
Sbjct: 497 LVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKK 553
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 211/472 (44%), Gaps = 27/472 (5%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
F ++S + NF +SY S + + ++ S+ ++ T + + I+
Sbjct: 38 FNFIPYSSSKINF----ISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILG 93
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGV 185
SL++ K+ + +++F I P + CN L+ G I A +F ++ G
Sbjct: 94 SLVKSKHYHTVLYLSQKMEF--RGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGY 151
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRV 242
TI F I C ++ Q D+V + + G+ +IHG CK
Sbjct: 152 VPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGT-----LIHGLCKVGET 206
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAE---EFKLMGSVFE--REVVLKKKRKLGVAPRTN 297
A +L + +P+ + Y + + + KL+ F+ E++ K G++P
Sbjct: 207 RAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISK-----GISPDVV 261
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFM 356
Y I G + ++ +A +L ++ D N L+ + + F+ M
Sbjct: 262 TYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM 321
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
+++G P T ++L C + ++ ++ ++ D++SY++M++ C +
Sbjct: 322 MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF 381
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
EA + +EM RK + PDV Y+SL++ + + A +L DQM G ++TYN +
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSI 441
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ ++ +++ A+ L + +KG+ P+ TY+ L++GLCQ L+ A +VF
Sbjct: 442 LDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVF 493
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 189/420 (45%), Gaps = 3/420 (0%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+++ +++K L L QI +V D Y +I L + T+ A +
Sbjct: 156 ITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQR 215
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
V N + N+++ + ++ A +F EM +G+ + + I FC K
Sbjct: 216 VDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGK 275
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + + +++ EN + +L+ + FCK +++E V D + + KP+F+ Y
Sbjct: 276 LNDAIDLFNKMI-LENIKPDVYTFNILV-NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTY 333
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + + L+ V + + + + GV P Y I G ++ EA L + +
Sbjct: 334 NSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHR 393
Query: 325 GKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
D ++LI +S S A+ + M ++G PT+ T +++ LCK ++ D+
Sbjct: 394 KNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDK 453
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ + L +M +Y++++ LC SG+L +A V + + KG + +V Y +++
Sbjct: 454 AIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQ 513
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C E L A L +M +GC + KTY I+I + E + A +L M+ +GV P
Sbjct: 514 GFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 197/426 (46%), Gaps = 18/426 (4%)
Query: 133 KNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
KNT FN + ++ I +S S+ +D+A+ +F+ + R F
Sbjct: 34 KNTH-----FNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEF 88
Query: 193 GVFIWKFCENAKLGQVLSMLD--EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD 250
+ ++ VL + E R + +++N +++ I+ FC+ + AF V
Sbjct: 89 NKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL----INCFCQLGLIPFAFSVFA 144
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
++ PD I + + + L G + + + K LG Y I GL
Sbjct: 145 KILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLC--- 201
Query: 311 RICEAKELGEVI--VSGKFTIDDDVL-NALIGSVSSID-PRSAIVFFNFMIEKGRVPTLS 366
++ E + +++ V G + V+ N +I S+ + A F+ MI KG P +
Sbjct: 202 KVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVV 261
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T S L C K ++ ++++ + + D+ ++N++V+ C G+++E V M
Sbjct: 262 TYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM 321
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
++G+ P+ YNSLM+ C + AK +++ M G + ++++Y+I+I+ F ++ +
Sbjct: 322 MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF 381
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
+ A+ LF M K + PD TY+SL++GL + + A ++ ++ + V ++
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSI 441
Query: 547 MISLCR 552
+ +LC+
Sbjct: 442 LDALCK 447
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
FNF+ + S+ S N D+ V ++ L + +N ++ L
Sbjct: 38 FNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVK 97
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
S + Q+M+ +G+ P++ N L+ C+ L+ A ++ ++ G + T
Sbjct: 98 SKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTIT 157
Query: 473 YNILISKFSEVGEIEGALRLFHN-MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
+ LI G+I+ A LFH+ ++ G D +Y +L+ GLC+ +AA ++ +
Sbjct: 158 FTTLIKGLCLKGQIQQAF-LFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV 216
Query: 532 VNHDVMLARSILSTFMISLCRRVLI 556
+ V + +T + S+C+ L+
Sbjct: 217 DGNLVQPNVVMYNTIIDSMCKVKLV 241
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 124/549 (22%), Positives = 235/549 (42%), Gaps = 23/549 (4%)
Query: 12 RISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSL----- 66
R+ ++ A +R A LL + LG R S PS+V +++ LL H L
Sbjct: 97 RLLSRLLGAGHRPHLAASLVDLLHRAALALGPRRSALPSVVDTLLS--LLADHGLLDDAV 154
Query: 67 -ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
AL PN + + IL L+ +RQ + + + V + + +
Sbjct: 155 RALARVRQLRVPPNTR----TCNHILLRLARNRQGGLVRRLFDLLPVPNVF----TFNIV 206
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHR 183
I L + +A ++F V+ P++ NSL+ G ++ ++ EM
Sbjct: 207 IDFLCKEGELVEARALF--VRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKS 264
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G + + I F + ++ + S E++++ ++ V + FCK V+
Sbjct: 265 GCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQ--GVVANVVTFSTFVDAFCKEGLVQ 322
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
EA K+ ++R+R P+ Y + + G + + V+L + G+ P Y +
Sbjct: 323 EAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV 382
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRV 362
GL E ++ EA + ++ G ++ + LI G + + A+ N M KG
Sbjct: 383 DGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGME 442
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
+S L LCK K DE + ++ + Y ++ L +G+ EA +
Sbjct: 443 LDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVAL 502
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ ++ G P+V Y +L++ C+ + A +++M G N++ Y LI F +
Sbjct: 503 LHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCK 562
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
+G + A+ L + M++KG++ D YTSL++G ++ NLQ AF + K + + L
Sbjct: 563 IGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYC 622
Query: 543 LSTFMISLC 551
+ F+ C
Sbjct: 623 YTCFISGFC 631
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 165/386 (42%), Gaps = 3/386 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ + G ++ A F EM +GV + + F F+ FC+ + + + + ++R
Sbjct: 274 NALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRV 333
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R M+ ++ G CK R+++A +LDE+ + P+ + Y ++ + G V
Sbjct: 334 R--GMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKV 391
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E + VL + GV Y I G + A +L + + +D + L
Sbjct: 392 AEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTL 451
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G A + M G P + + L K K E V + + + +
Sbjct: 452 IWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGF 511
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ +Y ++ LC +G + EA +M+ GLDP+V Y +L++ C+ L A
Sbjct: 512 QPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMH 571
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L ++M G S + Y LI + + ++ A L M+E G+ D YT + G C
Sbjct: 572 LMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFC 631
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSI 542
+Q A V ++ + + +++
Sbjct: 632 NMNMMQEARGVLSEMIGTGITPDKTV 657
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/448 (20%), Positives = 195/448 (43%), Gaps = 5/448 (1%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+S++ + ++ ++ +++ + D Y +I + +KA+S F E
Sbjct: 236 VTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGE 295
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+K ++ + +G + A+K+F +M RG+ + + + C+ +
Sbjct: 296 MKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGR 355
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + +LDE+ + ++ V +++ G CK +V EA VL + K + + Y
Sbjct: 356 LDDAIVLLDEMVHQ--GLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLY 413
Query: 265 RIVAEEFKLMGSVFEREV-VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+ M + ER + +L + + G+ + Y I GL ++++ EAK L +
Sbjct: 414 TTLIHG-HFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMA 472
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+ + ++ ++ S A+ + +++ G P + T L LCK
Sbjct: 473 GCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSIS 532
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E + + + ++++Y ++ C G L +A ++ EM KG+ D Y SL+
Sbjct: 533 EAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLI 592
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+ ++ L+ A L +M SG +L Y IS F + ++ A + M+ G+
Sbjct: 593 DGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGIT 652
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNK 530
PD T Y L+ + N++ A + N+
Sbjct: 653 PDKTVYNCLIRKYQKLGNMEEASSLQNE 680
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 42/212 (19%)
Query: 378 RNKSDELVE-VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
RN+ LV ++ +L + FT +N+++ FLC G L EA + MK G PDV
Sbjct: 181 RNRQGGLVRRLFDLLPVPNVFT----FNIVIDFLCKEGELVEARALFVRMKAMGCSPDVV 236
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA------- 489
YNSL++ + L ++L +M SGC+ ++ TYN LI+ FS+ G +E A
Sbjct: 237 TYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEM 296
Query: 490 ----------------------------LRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
++LF M +G+ P+ TYTSL++G C+ L
Sbjct: 297 KRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRL 356
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMI-SLCR 552
A + ++ V H ++ + T M+ LC+
Sbjct: 357 DDAIVLLDEMV-HQGLVPNVVTYTVMVDGLCK 387
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 9/169 (5%)
Query: 393 ANDYFTDME---------SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
A YF +M+ +++ V C G ++EA + +M+ +G+ P+ Y SL++
Sbjct: 289 AYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVD 348
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C+ L A L D+M G N+ TY +++ + G++ A + M GV
Sbjct: 349 GTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKA 408
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ YT+L+ G N + A ++ N+ N + L S+ T + LC+
Sbjct: 409 NELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCK 457
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 138/341 (40%), Gaps = 21/341 (6%)
Query: 103 IDSVLKQVKVNK--ITLDSSVYRFIIPS------LIQGKNTQKAFSVFNEVKFNCEDIGP 154
+D K +++ + LD V++ ++P+ ++ G + + + V E G
Sbjct: 347 VDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGV 406
Query: 155 EICNSLLAVLASDGYIDN----ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS 210
+ L L +++N AL + ++M ++G+E +G IW C++ K+ + S
Sbjct: 407 KANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKS 466
Query: 211 MLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
+L ++ R N++I +++ L K + EA +L ++ +P+ + Y +
Sbjct: 467 LLHKMAGCGLRPNTVIYTTIMDALF-----KAGKESEAVALLHKILDSGFQPNVVTYCAL 521
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
+ GS+ E K R+LG+ P Y I G + +A L ++
Sbjct: 522 IDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGM 581
Query: 328 TIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
++D V +LI G + + + A MIE G L + C N E
Sbjct: 582 SLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARG 641
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
V + D YN ++ G + EA + EM+
Sbjct: 642 VLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEME 682
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 65/124 (52%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P+V +N +++ C+E L A+ L+ +M A GCS ++ TYN LI + + G++E +L
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M + G A D TY +L+ + ++ A+ F + V+ STF+ + C+
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317
Query: 553 RVLI 556
L+
Sbjct: 318 EGLV 321
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 197/448 (43%), Gaps = 8/448 (1%)
Query: 90 ILKSLSLSRQIN-AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
+LK L +++++ A D +L ++ D Y +I + +KA+++F E+
Sbjct: 131 LLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMD- 189
Query: 149 CEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
+ I P + +++ L +D A +F +M RGV+ + I + K
Sbjct: 190 -QGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWK 248
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+V+ ML+E+ + + + L++ CK R EA D + + KPD Y I
Sbjct: 249 EVVQMLEEMST--HGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAI 306
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ + G++ E L GV+P + + I EA + +
Sbjct: 307 LLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQG 366
Query: 327 FTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
+ D ALI ++ + A++ FN MI +G P + S+L LC K ++
Sbjct: 367 LSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAE 426
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
E++ + D +N ++ LC GR+ EA +I M R G+ P+V YN+L+
Sbjct: 427 ELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGH 486
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C + A KL D M ++G N TY IL+ + + ++ A LF ML KGV P
Sbjct: 487 CLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVV 546
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVN 533
TY ++L GL Q A E++ +N
Sbjct: 547 ATYNTILHGLFQTGRFSEANELYLNMIN 574
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 181/423 (42%), Gaps = 45/423 (10%)
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDG---YIDNALKMFDEMSHR---GVEFSTI 190
+A +F+E+ N LL V++ G + + +F M+ V +
Sbjct: 32 EALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNAC 91
Query: 191 GFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD 250
+ + I FC +L + + K +N VI+ L+ G C KRV+EA +L
Sbjct: 92 TYSILIGCFCRMGRLEHGFAAFGLILK-TGWRVNVIVISQLL-KGLCDAKRVDEATDIL- 148
Query: 251 ELRIRE--CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
LR+ E C PD +AY V F G V + + + G+ P Y I GL
Sbjct: 149 LLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGL-- 206
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTL 368
C+A+ +D + F MI++G P T
Sbjct: 207 ----CKAQ--------------------------VVDRAKGV--FQQMIDRGVKPDNGTY 234
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ L K E+V++ + +S + D +Y +++ +LC +GR REA M R
Sbjct: 235 NCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFR 294
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
KG+ PDV+ Y L+ + L D M +G S N + +NI+ +++ IE
Sbjct: 295 KGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEE 354
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
A+ +F+ M ++G++PD ++ +L++ LC+ + A FN+ +N V + S+ +
Sbjct: 355 AMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVY 414
Query: 549 SLC 551
LC
Sbjct: 415 GLC 417
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/448 (18%), Positives = 196/448 (43%), Gaps = 9/448 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++ L ++ ++ V +Q+ + D+ Y +I + ++ + E
Sbjct: 197 VTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEE 256
Query: 145 VKFNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ + + P+ LL L +G A FD M +G++ + + + +
Sbjct: 257 M--STHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATK 314
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L ++ S LD + N + I ++ + K +EEA + +++R + PD +
Sbjct: 315 GALSEMHSFLDLMVG--NGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVV 372
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
++ + + +G V + + + GV P + + GL + +A+EL +
Sbjct: 373 SFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEV 432
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ +D N L+ ++ + + R A + MI G P + + + L C +
Sbjct: 433 LDQGICVDAVFFNTLMCNLCN-EGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGR 491
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
DE ++ V+ +N + +Y +++ C + R+ +AY + +EM KG+ P V+ YN+
Sbjct: 492 IDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNT 551
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
++ + A +L+ M S ++ TYNI+++ + ++ A ++F + K
Sbjct: 552 ILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKD 611
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVF 528
D+ T+ ++ L + + A ++F
Sbjct: 612 PQLDSVTFNIMIGALLKGGRKEDAMDLF 639
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 181/429 (42%), Gaps = 7/429 (1%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y +L + ++ + S L + N ++ + ++ + + + ++A +FN K
Sbjct: 304 YAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFN--K 361
Query: 147 FNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + P++ + +L+ L G +D+A+ F++M + GV + F ++ C K
Sbjct: 362 MRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGK 421
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ + EV + + +V ++ C RV EA +++D + +P+ I+Y
Sbjct: 422 WEKAEELFFEVL--DQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISY 479
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIV 323
+ L G + E +L G+ P Y + G RR+ +A L E+++
Sbjct: 480 NTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLM 539
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
G + L G + A + MI + T + + LCK N DE
Sbjct: 540 KGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDE 599
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
++++ L + D D ++N+M+ L GR +A + + GL PDV Y + E
Sbjct: 600 AFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAE 659
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
E L L+ M SG + N N L+ + G+I A + + EK +
Sbjct: 660 NLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSL 719
Query: 504 DATTYTSLL 512
+A+T + L+
Sbjct: 720 EASTTSMLI 728
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 167/378 (44%), Gaps = 19/378 (5%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
I N + A I+ A+ +F++M +G+ + FG I C KLG+V D+
Sbjct: 338 IFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALC---KLGRV----DDA 390
Query: 216 RKRENSMINGSVIAVL-----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
+ N MIN V + +++G C + E+A ++ E+ + D + + +
Sbjct: 391 VLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCN 450
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
G V E + ++ ++GV P Y + G + RI EA +L +V+VS +
Sbjct: 451 LCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPN 510
Query: 331 DDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
+ L+ G + A F M+ KG P ++T + + L + + E E+Y
Sbjct: 511 EFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYL 570
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+ + D+ +YN++++ LC + + EA+ + + + K D +N ++ A +
Sbjct: 571 NMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGG 630
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSE---VGEIEGALRLFHNMLEKGVAPDAT 506
A L+ + A G ++ TY ++ E +GE +G LF M + G AP++
Sbjct: 631 RKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDG---LFSAMEKSGTAPNSH 687
Query: 507 TYTSLLEGLCQETNLQAA 524
+L+ L ++ A
Sbjct: 688 MLNALVRRLLHRGDISRA 705
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 97/240 (40%), Gaps = 36/240 (15%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV-LSANDYFTDMESYNVMVSFLC 411
F +++ G + +S L K LC + DE ++ + +S D+ +YN +++
Sbjct: 113 FGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFF 172
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
G++ +AY + EM +G+ P+V Y ++++ C+ ++ AK ++ QM G +
Sbjct: 173 REGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNG 232
Query: 472 TYNILI------SKFSEV-----------------------------GEIEGALRLFHNM 496
TYN LI K+ EV G A F +M
Sbjct: 233 TYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSM 292
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
KG+ PD Y LL G + L + V + V R I + + ++ +I
Sbjct: 293 FRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMI 352
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 190/424 (44%), Gaps = 13/424 (3%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFD 178
Y ++ L + + KA VF + C + P++ N L+ G + A+K +
Sbjct: 229 TYNSVLKGLCKHRRFDKAKEVFRTMD-QCS-VAPDVRSFNILIGGFCRVGEVKEAVKFYK 286
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
EM HR V + F I F ++ + L E++ ++ VI ++I GFC+
Sbjct: 287 EMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGL--GLVPDGVIYTMVIGGFCR 344
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+ EA +V DE+ C PD + Y + + + E +L + + GV P
Sbjct: 345 AGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCT 404
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMI 357
+ I G + A +L + ++ + D N+LI G D A ++ M
Sbjct: 405 FTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMH 464
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+ +P T S L + C++ + ++ + ++ +YN ++ C SG ++
Sbjct: 465 AREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVK 524
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+ +Q+M++ + PD+ +N+L+ +E+ + A +++ M + TYN++I
Sbjct: 525 KGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMII 584
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ FSE G ++ A R+F M + G+ PD TY SL+ G N + AF++ HD M
Sbjct: 585 NGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQL------HDEM 638
Query: 538 LARS 541
+ R
Sbjct: 639 IHRG 642
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 191/426 (44%), Gaps = 20/426 (4%)
Query: 111 KVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDG 168
+VN TL+ V+ + G +T V +E++ C + P++ N L+ G
Sbjct: 154 EVNAYTLNIMVHSYCKTLEFDGADT-----VISEMEKRC--VFPDVVTHNVLIDARFRAG 206
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVI 228
+D A+ + D M++RG++ + + + C++ + + + R + + V
Sbjct: 207 DVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVF---RTMDQCSVAPDVR 263
Query: 229 AV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+ ++I GFC+ V+EA K E++ R PD +++ + F G + L++
Sbjct: 264 SFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREM 323
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID----DDVLNALIGSVSS 343
+ LG+ P Y I G + EA + + +V D + +LN L
Sbjct: 324 KGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRL 383
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+D A N M E+G P L T + L C++ + ++++ L D+ +Y
Sbjct: 384 LD---AEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTY 440
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N ++ +C G L +A + +M + + P+ Y+ L+++ C + + A D+M
Sbjct: 441 NSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVK 500
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G N++TYN +I + G ++ + M + V PD T+ +L+ G +E N+
Sbjct: 501 KGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHG 560
Query: 524 AFEVFN 529
AF VFN
Sbjct: 561 AFNVFN 566
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 178/429 (41%), Gaps = 44/429 (10%)
Query: 116 TLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALK 175
T V+ +I + Q + ++AF F + + + N+LLAVL+ G
Sbjct: 84 TPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAG------- 136
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
W VLS +S +N + +++ H
Sbjct: 137 ---------------------WPHLAQEAYRLVLS--------SDSEVNAYTLNIMV-HS 166
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
+CK + A V+ E+ R PD + + ++ + G V ++ G+ P
Sbjct: 167 YCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPG 226
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFN 354
Y + GL RR +AKE+ + D N LIG + + + A+ F+
Sbjct: 227 IVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYK 286
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M + P + + S L +R + D + + D Y +++ C +G
Sbjct: 287 EMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAG 346
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ EA V EM G PDV YN+L+ C++ L A+KL ++M G + +L T+
Sbjct: 347 SMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFT 406
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
LI + G E AL+LF +L + + PD TY SL++G+C++ +L A E++
Sbjct: 407 TLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELW------ 460
Query: 535 DVMLARSIL 543
D M AR IL
Sbjct: 461 DDMHAREIL 469
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%)
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
D +AI + M +G P + T +++ K LCK + D+ EV++ + D+ S+N
Sbjct: 207 DVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFN 266
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
+++ C G ++EA +EM+ + + PDV ++ L+ R + A +M
Sbjct: 267 ILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGL 326
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G + Y ++I F G + ALR+ M+ G PD TY +LL GLC++ L A
Sbjct: 327 GLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDA 386
Query: 525 FEVFNKSVNHDVMLARSILSTFMISLCRR 553
++ N+ V +T + CR+
Sbjct: 387 EKLLNEMEERGVTPDLCTFTTLIHGYCRQ 415
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 150/367 (40%), Gaps = 11/367 (2%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
Q T +S+ ++ S +++ + L+++K + D +Y +I + +
Sbjct: 289 QHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSM 348
Query: 136 QKAFSVFNE-VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
+A V +E V F C P++ N+LL L + +A K+ +EM RGV F
Sbjct: 349 SEALRVRDEMVGFGCL---PDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTF 405
Query: 193 GVFIWKFCENAKLGQVLSMLDEV-RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
I +C L + D + R+R + V +I G C+ + +A ++ D+
Sbjct: 406 TTLIHGYCRQGNFENALQLFDTLLRQRLRPDV---VTYNSLIDGMCRKGDLAKANELWDD 462
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ RE P+ I Y I+ + G V + L + K G P Y I G
Sbjct: 463 MHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGN 522
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
+ + ++ + + D N LI G + + A FN M ++ P T +
Sbjct: 523 VKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNM 582
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
+ ++ + V+K + + D +Y +++ T+G ++A+ + EM +G
Sbjct: 583 IINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRG 642
Query: 431 LDPDVSF 437
PD F
Sbjct: 643 FAPDDKF 649
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/175 (18%), Positives = 74/175 (42%)
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
R + E+ L A+ + +++++ S + REA+ + + + S
Sbjct: 65 RRRGASRREIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASA 124
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
N+L+ R A++ + + +S N T NI++ + + E +GA + M
Sbjct: 125 SNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEME 184
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++ V PD T+ L++ + ++ AA + + N + ++ + LC+
Sbjct: 185 KRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCK 239
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/495 (23%), Positives = 223/495 (45%), Gaps = 44/495 (8%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F + +Y+ +LK L + + S+L++++ N + D Y +I +GK +KA
Sbjct: 137 GFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKA 196
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ NE++ + L+ G +D A+ + EM H+G+E I + I
Sbjct: 197 LQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRG 256
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
FC+ +L + ++ DEV +R +S ++ +I GFCK R++EA ++ + + R +
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPC--AITYNTLIRGFCKLGRLKEASEIFEFMMERGVR 314
Query: 259 PDFIAYRIV----------AEEFKLMGSVFERE--------------------------- 281
P+ Y + E +L+ + +++
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEI 374
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALI- 338
V L KKR+ P Y + GL + + EA +L +++ D DV+ NALI
Sbjct: 375 VELMKKRR--TRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIH 432
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G A+ ++ ++EK + T + L + K ++ +E++K +S +
Sbjct: 433 GLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVP 492
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+ ++Y M+ C +G L A G++ +M+ L P V YN L+ + C++ L A +L+
Sbjct: 493 NSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLF 552
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
++M ++ ++NI+I + G+I+ A L M G++PD TY+ L+ +
Sbjct: 553 EEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKL 612
Query: 519 TNLQAAFEVFNKSVN 533
L A F+K ++
Sbjct: 613 GYLDEAISFFDKMID 627
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 201/447 (44%), Gaps = 58/447 (12%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAV---LASDGYIDNALKMFDEMS 181
++ +L++ +N + AFS + ++ I + LL + G+ L + M
Sbjct: 78 LMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLAL---ML 134
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
RG F+ + + + C N + G+ +S+L E+R +NS++ V +I GFC+GK
Sbjct: 135 KRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMR--QNSLMPDVVSYNTVIRGFCEGKE 192
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+E+A ++ +E++ C + + I+ + F G + E +LK+ + G+ Y
Sbjct: 193 LEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTS 252
Query: 302 FILGLIVERRICEAKEL--GEVIVSGKFTIDDD----VLNALIGSVSSIDP-RSAIVFFN 354
I R C+ EL G+ + D N LI + + A F
Sbjct: 253 LI------RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFE 306
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
FM+E+G P + T + L LC K+ E +++ ++ D ++ +YN++++ LC
Sbjct: 307 FMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDS 366
Query: 415 RLREAYGVIQEMKRK--------------GL-----------------------DPDVSF 437
+ +A +++ MK++ GL DPDV
Sbjct: 367 LVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVIS 426
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
+N+L+ C+ + L A ++D + +G++ T NIL++ + G++ A+ L+ +
Sbjct: 427 FNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQIS 486
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAA 524
+ P++ TYT++++G C+ L A
Sbjct: 487 NSKIVPNSDTYTTMIDGFCKTGMLNVA 513
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 104/199 (52%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
L G +++ A+ M + +P + + + + + C+ + ++ +++ + +
Sbjct: 149 LKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGC 208
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ ++ +++ C +G++ EA G+++EMK KGL+ D+ Y SL+ C L K
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKA 268
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L+D++ G S TYN LI F ++G ++ A +F M+E+GV P+ TYT L++GLC
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLC 328
Query: 517 QETNLQAAFEVFNKSVNHD 535
+ A ++ N + D
Sbjct: 329 GVGKTKEALQLLNLMLQKD 347
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%)
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
N + V S + A F+ M+E +LS L + + K+ V ++
Sbjct: 77 NLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKR 136
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ ++ +YN+++ LC + +A +++EM++ L PDV YN+++ C L A
Sbjct: 137 GFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKA 196
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+L ++M SGCS +L T+ ILI F + G+++ A+ L M KG+ D YTSL+ G
Sbjct: 197 LQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRG 256
Query: 515 LCQETNLQAAFEVFNK 530
C L +F++
Sbjct: 257 FCDCGELDRGKALFDE 272
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 104/516 (20%), Positives = 209/516 (40%), Gaps = 79/516 (15%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
Q + S +++ ++ + + +++ +LK++K + D VY +I
Sbjct: 204 QGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGEL 263
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
+ ++F+EV + N+L+ G + A ++F+ M RGV + +
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGL 323
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
I C K + L +L+ + +++ V +II+ CK V +A ++++ ++ R
Sbjct: 324 IDGLCGVGKTKEALQLLNLMLQKDEE--PNVVTYNIIINKLCKDSLVADALEIVELMKKR 381
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFE--REVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+PD I Y + G + E + + L K P + I GL R+
Sbjct: 382 RTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLH 441
Query: 314 EAKELGEVIV----SGKFTIDDDVLNALI--GSV------------SSIDPRSAIVFFNF 355
+A ++ +++V +G + +LN+ + G V S I P S +
Sbjct: 442 QALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDT--YTT 499
Query: 356 MIE-----------KGRV---------PTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
MI+ KG + P++ + L +LCK+ D+ +++ + +D
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDD 559
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
F D+ S+N+M+ +G ++ A ++ M GL PD+ Y+ L
Sbjct: 560 SFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKL-------------- 605
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
I++F ++G ++ A+ F M++ G PDA S+L+
Sbjct: 606 ---------------------INRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYC 644
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+ E K V+ DV+L + + T M +C
Sbjct: 645 ISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMC 680
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 84/174 (48%)
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+++G + + L K LC+ + + V + + + N D+ SYN ++ C
Sbjct: 132 LMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGK 191
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
L +A + EM+ G + + L++A C+ + A L +M G +L Y
Sbjct: 192 ELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYT 251
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
LI F + GE++ LF +LE+G +P A TY +L+ G C+ L+ A E+F
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIF 305
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 136/334 (40%), Gaps = 44/334 (13%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF--IIPSLIQGKNTQKAFSVF 142
++Y+S+L L ++ +L + + D V F +I L +G +A ++
Sbjct: 388 ITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIY 447
Query: 143 NEV--KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+ + K DI N LL G ++ A++++ ++S+ + ++ + I FC
Sbjct: 448 DLLVEKLGAGDI--VTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFC 505
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ L +L ++R E + SV ++ CK +++A+++ +E++ + P
Sbjct: 506 KTGMLNVAKGLLCKMRLSE---LPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFP 562
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D I++ I+ + G + E +L G++P Y + I R + L
Sbjct: 563 DVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLI------NRFLKLGYLD 616
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
E AI FF+ MI+ G P ++ K +
Sbjct: 617 E----------------------------AISFFDKMIDSGFEPDAHICDSVLKYCISQG 648
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
++D+L E K L D D E ++ ++C+S
Sbjct: 649 ETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSS 682
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 178/387 (45%), Gaps = 25/387 (6%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+A G +D A ++ M V + I C+ ++G+ LS+LD++
Sbjct: 117 NTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 173
Query: 218 R--ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
R + S++ +V+ + CK +A +VLDE+R + C P+ + Y ++ G
Sbjct: 174 RGCQPSVVTYTVL----LEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREG 229
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
V + L + G P T Y + GL +R + +EL ++ ++ +
Sbjct: 230 RVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 289
Query: 336 ALI------GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN-LCKRNKSDELVEVY 388
L+ G V AI M G +TL N+ N +CK+ + D+ +
Sbjct: 290 MLVRFFCRGGMVE-----RAIQVLEQMSGHGCAAN-TTLCNIVINTICKQGRVDDAFQFL 343
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+ + D SY ++ LC + R +A +++EM RK P+ +N+ + C++
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 403
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
L+ A L +QM GC N+ TYN L++ F G ++ AL LF++M K P+ TY
Sbjct: 404 GLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITY 460
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHD 535
T+LL GLC L AA E+ + + D
Sbjct: 461 TTLLTGLCNAERLDAAAELLAEMLQKD 487
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/487 (22%), Positives = 205/487 (42%), Gaps = 39/487 (8%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y I++ L ++ S+L + Y ++ ++ + +A V +E+
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 206
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ + P I N ++ + +G +D+A + + +S G + T+ + + C
Sbjct: 207 RA--KGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 264
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ V + E+ ++ N M N V +++ FC+G VE A +VL+++ C +
Sbjct: 265 RWEDVEELFAEMMEK-NCMPN-EVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTL 322
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
IV G V + L G +P T Y + GL R +AKEL + +V
Sbjct: 323 CNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMV 382
Query: 324 SGKFTIDDDVLNA----------------LIGSVSSIDPRSAIVFFNFMIE----KGRV- 362
++ N LI +S IV +N ++ +GRV
Sbjct: 383 RKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD 442
Query: 363 ------------PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
P T + L LC + D E+ + D ++ ++NV+VSF
Sbjct: 443 SALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C G + EA ++++M G P++ YN+L++ + A +L + ++G S ++
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDI 562
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TY+ +I S +E A+++FH + + G+ P A Y +L LC+ N A + F
Sbjct: 563 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 622
Query: 531 SVNHDVM 537
V++ M
Sbjct: 623 MVSNGCM 629
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 142/326 (43%), Gaps = 4/326 (1%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I C+ R +A +VL D AY + + G + + + +
Sbjct: 84 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQL---DAARRLIASMP 140
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAI 350
VAP Y I GL R+ EA L + ++ L+ +V S A+
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ M KG P + T + + +C+ + D+ E LS+ + D SY ++ L
Sbjct: 201 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 260
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C + R + + EM K P+ ++ L+ CR ++ A ++ +QM GC+ N
Sbjct: 261 CAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 320
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
NI+I+ + G ++ A + +NM G +PD +YT++L+GLC+ + A E+ +
Sbjct: 321 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 380
Query: 531 SVNHDVMLARSILSTFMISLCRRVLI 556
V + +TF+ LC++ LI
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLI 406
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/522 (18%), Positives = 206/522 (39%), Gaps = 54/522 (10%)
Query: 30 WTPLLEQTLHQLGLRDSLS--PSLVARVINPYLLTHHSLALG------------FFNWAS 75
+T LLE G ++ + A+ P ++T++ + G F N S
Sbjct: 183 YTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLS 242
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
F +SY ++LK L +++ ++ + ++ + + ++ +G
Sbjct: 243 SY-GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMV 301
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
++A V ++ + +CN ++ + G +D+A + + M G TI +
Sbjct: 302 ERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISY--- 358
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
++ G C+ +R E+A ++L E+ +
Sbjct: 359 ----------------------------------TTVLKGLCRAERWEDAKELLKEMVRK 384
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
C P+ + + G + + +++++ + G Y + G V+ R+ A
Sbjct: 385 NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA 444
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
EL + TI L + + +D +A M++K P + T + L
Sbjct: 445 LELFYSMPCKPNTITYTTLLTGLCNAERLD--AAAELLAEMLQKDCAPNVVTFNVLVSFF 502
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C++ DE +E+ + + + ++ +YN ++ + EA ++ + G+ PD+
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDI 562
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y+S++ RED + A K++ + G YN ++ + +GA+ F
Sbjct: 563 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 622
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
M+ G P+ TY +L+EGL E L+ ++ + + V+
Sbjct: 623 MVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 32/226 (14%)
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS---------- 408
+G P + + L +NLC+R ++ + V + + D+ +YN +V+
Sbjct: 72 RGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDA 131
Query: 409 ----------------------FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
LC GR+ EA ++ +M +G P V Y L+EA C
Sbjct: 132 ARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVC 191
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ A ++ D+M A GC+ N+ TYN++I+ G ++ A + + G PD
Sbjct: 192 KSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV 251
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+YT++L+GLC + E+F + + + M + CR
Sbjct: 252 SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 297
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L EA ++ +G PDV L+ CR A ++ SG + ++ YN
Sbjct: 59 LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
L++ + G+++ A RL +M VAPDA TYT ++ GLC + A + + ++
Sbjct: 119 LVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175
Query: 536 VMLARSILSTFMISLCR 552
+ + + ++C+
Sbjct: 176 CQPSVVTYTVLLEAVCK 192
>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/495 (22%), Positives = 220/495 (44%), Gaps = 20/495 (4%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVN-KITLDSSVYR 123
S AL F WAS PNF H+ +Y +++ L R+ + VL ++ + D S++
Sbjct: 108 SQALQTFRWASNLPNFIHNQSTYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFV 167
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMF-DEMSH 182
I+ L + + ++ V + + E+ +I NS+L VL + ID A + + +M
Sbjct: 168 TIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKED-IDLAREFYRKKMMM 226
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRV 242
GV FG+ + C ++G +L ++ R + +VI +IH CK +V
Sbjct: 227 NGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKT--PNTVIYNTMIHALCKNGKV 284
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
A +++E+ +P + + ++ + ++ + V+L+K +G P +
Sbjct: 285 GRARSLMNEM----VEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKV 340
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGR 361
+ L R+ E E+ E + S +D N LI + + M KG
Sbjct: 341 VGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGC 400
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
+P + T + L+ C D ++++ + + + +Y+ ++ LC+ GR+ + +
Sbjct: 401 LPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFK 460
Query: 422 VIQEMK--RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM---FASGCSGNLKTYNIL 476
+++ M+ R G +S YNS++ +++ A + +M F +L+
Sbjct: 461 ILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRSLR----- 515
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I F G I A R++ M+++G P Y L+ G CQ+ N++ AFE+ N+ V+H
Sbjct: 516 ILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGY 575
Query: 537 MLARSILSTFMISLC 551
+ + + C
Sbjct: 576 FPTAPTFNALISAFC 590
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 112/523 (21%), Positives = 199/523 (38%), Gaps = 78/523 (14%)
Query: 16 AIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWAS 75
I+ R R R+ +L+ + + G SL + +++ + LA F+
Sbjct: 168 TIVRGLGRARMVRQMIKVLD-LITKFGENPSLK--IFNSILDVLVKEDIDLAREFYRKKM 224
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
+ ++ ++K L L+ +I +L+ +K T ++ +Y +I +L +
Sbjct: 225 MMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKV 284
Query: 136 QKAFSVFNE------VKFN------CED---------------IG--PEICNS--LLAVL 164
+A S+ NE V FN C++ +G P++ + ++ +L
Sbjct: 285 GRARSLMNEMVEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGIL 344
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC--ENAKLGQVL------------- 209
G + +++ + + G + + I FC AK+G +
Sbjct: 345 CKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNV 404
Query: 210 -------------SMLDEVRKRENSM----INGSVIAV-LIIHGFCKGKRVEEAFKVLDE 251
MLD N M IN + + +I G C G R+E+ FK+L+
Sbjct: 405 DTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILE- 463
Query: 252 LRIRECKPDFIAYRIVAEEFKLMG----SVFEREV-VLKKKRKLGVAPRTNDYREFILGL 306
+ E RI + G + FE + L K KL PR D ILG
Sbjct: 464 --LMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKL--FPRAVDRSLRILGF 519
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTL 365
E I +AK + + ++ V LI G + R A N M++ G PT
Sbjct: 520 CNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTA 579
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
T + L C + K +++ + + DM SY+ MV LC G ++A + +
Sbjct: 580 PTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQ 639
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
M K + PD S +NS++ +E + L+ G G
Sbjct: 640 MVEKDILPDYSTWNSMLLCLTQETVWLEGDNLFHLQLQDGKYG 682
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 178/387 (45%), Gaps = 25/387 (6%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+A G +D A ++ M V + I C+ ++G+ LS+LD++
Sbjct: 117 NTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 173
Query: 218 R--ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
R + S++ +V+ + CK +A +VLDE+R + C P+ + Y ++ G
Sbjct: 174 RGCQPSVVTYTVL----LEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREG 229
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
V + L + G P T Y + GL +R + +EL ++ ++ +
Sbjct: 230 RVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 289
Query: 336 ALI------GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN-LCKRNKSDELVEVY 388
L+ G V AI M G +TL N+ N +CK+ + D+ +
Sbjct: 290 MLVRFFCRGGMVE-----RAIQVLEQMSGHGCAAN-TTLCNIVINTICKQGRVDDAFQFL 343
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+ + D SY ++ LC + R +A +++EM RK P+ +N+ + C++
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 403
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
L+ A L +QM GC N+ TYN L++ F G ++ AL LF++M K P+ TY
Sbjct: 404 GLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITY 460
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHD 535
T+LL GLC L AA E+ + + D
Sbjct: 461 TTLLTGLCNAERLDAAAELLAEMLQKD 487
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/487 (22%), Positives = 206/487 (42%), Gaps = 39/487 (8%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y I++ L ++ S+L + Y ++ ++ + +A V +E+
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 206
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ + P I N ++ + +G +D+A + + +S G + T+ + + C
Sbjct: 207 RA--KGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 264
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ V + E+ ++ N M N V +++ FC+G VE A +VL+++ C +
Sbjct: 265 RWEDVEELFAEMMEK-NCMPN-EVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTL 322
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
IV G V + L G +P T Y + GL R +AKEL + +V
Sbjct: 323 CNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMV 382
Query: 324 SGKFTIDDDVLNA----------------LIGSVSSIDPRSAIVFFNFMIE----KGRV- 362
++ N LI +S IV +N ++ +GRV
Sbjct: 383 RKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD 442
Query: 363 ------------PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
P T + L LC + D E+ + D ++ ++NV+VSF
Sbjct: 443 SALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C G + EA ++++M G P++ YN+L++ ++ A +L + ++G S ++
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDI 562
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TY+ +I S +E A+++FH + + G+ P A Y +L LC+ N A + F
Sbjct: 563 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 622
Query: 531 SVNHDVM 537
V++ M
Sbjct: 623 MVSNGCM 629
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 142/326 (43%), Gaps = 4/326 (1%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I C+ R +A +VL D AY + + G + + + +
Sbjct: 84 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQL---DAARRLIASMP 140
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAI 350
VAP Y I GL R+ EA L + ++ L+ +V S A+
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ M KG P + T + + +C+ + D+ E LS+ + D SY ++ L
Sbjct: 201 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 260
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C + R + + EM K P+ ++ L+ CR ++ A ++ +QM GC+ N
Sbjct: 261 CAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 320
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
NI+I+ + G ++ A + +NM G +PD +YT++L+GLC+ + A E+ +
Sbjct: 321 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 380
Query: 531 SVNHDVMLARSILSTFMISLCRRVLI 556
V + +TF+ LC++ LI
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLI 406
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/522 (18%), Positives = 206/522 (39%), Gaps = 54/522 (10%)
Query: 30 WTPLLEQTLHQLGLRDSLS--PSLVARVINPYLLTHHSLALG------------FFNWAS 75
+T LLE G ++ + A+ P ++T++ + G F N S
Sbjct: 183 YTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLS 242
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
F +SY ++LK L +++ ++ + ++ + + ++ +G
Sbjct: 243 SY-GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMV 301
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
++A V ++ + +CN ++ + G +D+A + + M G TI +
Sbjct: 302 ERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISY--- 358
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
++ G C+ +R E+A ++L E+ +
Sbjct: 359 ----------------------------------TTVLKGLCRAERWEDAKELLKEMVRK 384
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
C P+ + + G + + +++++ + G Y + G V+ R+ A
Sbjct: 385 NCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSA 444
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
EL + TI L + + +D +A M++K P + T + L
Sbjct: 445 LELFYSMPCKPNTITYTTLLTGLCNAERLD--AAAELLAEMLQKDCAPNVVTFNVLVSFF 502
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C++ DE +E+ + + + ++ +YN ++ + EA ++ + G+ PD+
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDI 562
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y+S++ RED + A K++ + G YN ++ + +GA+ F
Sbjct: 563 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 622
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
M+ G P+ TY +L+EGL E L+ ++ + + V+
Sbjct: 623 MVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 32/226 (14%)
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS---------- 408
+G P + + L +NLC+R ++ + V + + D+ +YN +V+
Sbjct: 72 RGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDA 131
Query: 409 ----------------------FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
LC GR+ EA ++ +M +G P V Y L+EA C
Sbjct: 132 ARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVC 191
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ A ++ D+M A GC+ N+ TYN++I+ G ++ A + + G PD
Sbjct: 192 KSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV 251
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+YT++L+GLC + E+F + + + M + CR
Sbjct: 252 SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 297
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L EA ++ +G PDV L+ CR A ++ SG + ++ YN
Sbjct: 59 LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
L++ + G+++ A RL +M VAPDA TYT ++ GLC + A + + ++
Sbjct: 119 LVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175
Query: 536 VMLARSILSTFMISLCR 552
+ + + ++C+
Sbjct: 176 CQPSVVTYTVLLEAVCK 192
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 209/471 (44%), Gaps = 15/471 (3%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A+ FN N ++ IL SL + S KQ+++ +I D + +I
Sbjct: 47 AVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILI 106
Query: 127 PSLIQGKNTQKAFSVFNEV---KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR 183
+ AFSV ++ F+ + + +L+ L +G + AL D++ +
Sbjct: 107 NCFCHLGHLNFAFSVLAKIFKLGFHPDTV---TITTLIKGLCLNGKVREALHFHDDVIAK 163
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRV 242
G + +G I C K G+ + L +RK + ++ +V+ II CK K V
Sbjct: 164 GFHLDQVSYGTLINGLC---KTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLV 220
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
A + E+ ++ PD + Y + ++G + E + + + P +
Sbjct: 221 IHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNIL 280
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSSIDPRSAIVF-FNFMIEK 359
+ GL E + +A+ + V++ K +D +++ N+L+ + + F FN M +
Sbjct: 281 VDGLCKEGEMKKARNVLAVMI--KQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARR 338
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P + + S + LCK DE V ++K + + + +YN ++ L GR+ +A
Sbjct: 339 GVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDA 398
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ ++ EM +G DV Y+SL++A C+ + A L ++ G N+ TY IL+
Sbjct: 399 WDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDG 458
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ G ++ A ++ ++L KG D Y ++ GLC+E A + +K
Sbjct: 459 LCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSK 509
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 175/429 (40%), Gaps = 41/429 (9%)
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI-CNSLLAVLASDGYIDNALKMFDEMSHRG 184
+PS I N A S FN + + P N +L+ L + A+ +M +
Sbjct: 37 LPSFID--NVDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQ 94
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
++ F + I FC L S+L ++ K +V +I G C +V E
Sbjct: 95 IQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKL--GFHPDTVTITTLIKGLCLNGKVRE 152
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A D++ + D ++Y + G VL+K L V P Y I
Sbjct: 153 ALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIID 212
Query: 305 GLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVP 363
L ++ + A +L E+IV F + G + + A+ FN M+ K P
Sbjct: 213 SLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKP 272
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
D+ ++N++V LC G +++A V+
Sbjct: 273 -----------------------------------DVYTFNILVDGLCKEGEMKKARNVL 297
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
M ++G+D ++ YNSLM+ A +++ M G + ++++Y+I+I+ +
Sbjct: 298 AVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKT 357
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
++ A+ LF M K +AP+ TY SL++GL + + A+++ N+ N
Sbjct: 358 KMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITY 417
Query: 544 STFMISLCR 552
S+ + +LC+
Sbjct: 418 SSLLDALCK 426
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 132/327 (40%), Gaps = 38/327 (11%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I+ K A ++ +++ +PD + I+ F +G + VL K KLG
Sbjct: 70 ILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLG 129
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
P T I GL + ++ EA + +++ F +D LI
Sbjct: 130 FHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLING----------- 178
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
LCK ++ ++V + + ++ YN ++ LC
Sbjct: 179 -----------------------LCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLC 215
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+ A + EM K + PDV Y +L+ C L+ A L++QM ++
Sbjct: 216 KDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVY 275
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG--LCQETNLQAAFEVFN 529
T+NIL+ + GE++ A + M+++GV + TY SL++G L ++ N +A F VFN
Sbjct: 276 TFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQEN-KATF-VFN 333
Query: 530 KSVNHDVMLARSILSTFMISLCRRVLI 556
V S + LC+ ++
Sbjct: 334 TMARRGVTPDVQSYSIMINGLCKTKMV 360
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 126/526 (23%), Positives = 220/526 (41%), Gaps = 65/526 (12%)
Query: 31 TPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSL--ALGFFNWASQQPNFTHSPLSYH 88
+P E++ L L P V +++ TH++ L FF+W S+ F H +
Sbjct: 60 SPTWERSSELSHLIPKLKPHHVVNLLD----THNNTESVLRFFHWVSRTHFFKHDMSCFV 115
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI-----IPSLIQGKNTQKAFS--V 141
S+L L R D+V + + + + V R I I + T +FS +
Sbjct: 116 SMLNRLVRDRLFVPADNV-RILMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLL 174
Query: 142 FNEVKFNCEDIGPEIC---------------NSLLAVLASDGYIDNALKMFDEMSHRGVE 186
KF+ + +G ++ N+++ +L + G + A + + H G
Sbjct: 175 IQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGAC 234
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
T + I C+N L M D + K + SV +I+G C R+EEA
Sbjct: 235 PDTFTYTSLIIGHCKNGNLDLAFEMFDRMVK--DGCDPNSVTYSALINGLCSEGRLEEAM 292
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
+L+E+ + +P AY I G E +L K +K G P Y I GL
Sbjct: 293 DMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGL 352
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
+ GKF + AI ++ M+ G VPT
Sbjct: 353 SRD---------------GKFEV-------------------AIGVYHKMLADGLVPTAV 378
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T S L L + + + +++ + ++D + E+YNV++ C+ G +++A + +M
Sbjct: 379 TYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQM 438
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
+ G P+V YN ++ ++ + A +L + M +G + TY LIS FS G++
Sbjct: 439 LKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKL 498
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
E A LF+ M+E G++P+ TY +++ G + A +F K V
Sbjct: 499 EHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMV 544
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 180/398 (45%), Gaps = 7/398 (1%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
SL+ +G +D A +MFD M G + +++ + I C +L + + ML+E+ +
Sbjct: 242 SLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDK 301
Query: 219 ENSMINGSVIAVLI-IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
I +V A I I C R EA K+L +++ R C P+ Y + G
Sbjct: 302 G---IEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGK- 357
Query: 278 FEREV-VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
FE + V K G+ P Y I L VE R A + E ++S + + N
Sbjct: 358 FEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNV 417
Query: 337 LIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
+I SI + A F+ M++ G P + T + + K+ + + + +++ N
Sbjct: 418 IIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNG 477
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D +Y ++S G+L A+ + EM G+ P+V YN+++ + A
Sbjct: 478 LKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDAL 537
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L+ +M SG + TYN++IS FS+ I A M+++G+ P+ TYTS ++GL
Sbjct: 538 ALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
C+ AF++F++ D S+ + LC+
Sbjct: 598 CKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQE 635
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 207/473 (43%), Gaps = 29/473 (6%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +++ LS + V ++ + + + Y +I L + A ++F +
Sbjct: 344 TYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWM 403
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ E N ++ S GYI A +FD+M G + I + + I + + +
Sbjct: 404 LSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYM 463
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ +L+ ++ N + + +I GF +G ++E AF + +E+ P+ + Y
Sbjct: 464 NNAMRLLEMMKG--NGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYN 521
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVS 324
+ + + V + + K + G P + Y I G RI EA+ G+++
Sbjct: 522 AIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQ 581
Query: 325 GKFTIDDDVLNALIGSVSSIDP-----RSAIVF--FNFMIEKGRVPTLSTLSNLSKNLCK 377
G +L +I S ID R+++ F F+ M ++ P L T S+L LC+
Sbjct: 582 G-------LLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQ 634
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
++++ + L + ++++Y +V LC GR EA +++ MK+KGL P
Sbjct: 635 EGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEI 690
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
Y +L+ C+ + A K++D M +G L Y LI + + A +F ML
Sbjct: 691 YRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTML 750
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVF------NKSVNHD--VMLARSI 542
+K D +T LL+GL +E + E+ N ++N VMLAR +
Sbjct: 751 KKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLAREL 803
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 195/443 (44%), Gaps = 17/443 (3%)
Query: 117 LDSSVYRFIIP--SLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDN 172
++ +V+ + IP SL + +A + ++K GP + +L++ L+ DG +
Sbjct: 303 IEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKK--RGCGPNVQTYTALISGLSRDGKFEV 360
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A+ ++ +M G+ + + + I + + L++ E +S+ N V I
Sbjct: 361 AIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIF-EWMLSHDSLPNTETYNV-I 418
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I GFC +++A + D++ P+ I Y I+ + G + +L+ + G+
Sbjct: 419 IKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGL 478
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG---SVSSIDPRSA 349
T Y I G ++ A L +V + + NA+I +V+ +D A
Sbjct: 479 KLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVD--DA 536
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ F M+E G VP+ T + + K N+ E + ++ +Y +
Sbjct: 537 LALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDG 596
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC +GR A+ + EMK++ P++ Y+SL++ C+E A++L D GC N
Sbjct: 597 LCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPN 652
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ TY L+ G A +L +M +KG+ P Y +LL G C+ +++A ++F+
Sbjct: 653 VDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFD 712
Query: 530 KSVNHDVMLARSILSTFMISLCR 552
V S + +LC+
Sbjct: 713 SMVTTGFQPCLSDYKALICALCK 735
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/513 (20%), Positives = 208/513 (40%), Gaps = 44/513 (8%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PN ++++++K L ++ + ++ + D+ Y +I + N
Sbjct: 199 RPNL----FTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLD 254
Query: 137 KAFSVFNE-VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
AF +F+ VK C D ++L+ L S+G ++ A+ M +EM +G+E + + +
Sbjct: 255 LAFEMFDRMVKDGC-DPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIP 313
Query: 196 IWKFCENAKLGQVLSMLDEVRKR---------------------------------ENSM 222
I C+ + + + +L +++KR + +
Sbjct: 314 IVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGL 373
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+ +V +I+ R E A + + + + P+ Y ++ + F +G + +
Sbjct: 374 VPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATA 433
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+ + K G +P Y I + + A L E++ +D LI S
Sbjct: 434 IFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFS 493
Query: 343 SIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
A FN M+E G P + T + + K D+ + ++ + +
Sbjct: 494 RGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSG 553
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN+M+S + R+ EA +M ++GL P+V Y S ++ C+ A K++ +M
Sbjct: 554 TYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEM 613
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
NL TY+ LI + G+ E A RL L+ G P+ TYT+L+ GLC +
Sbjct: 614 KKRDYFPNLCTYSSLIDGLCQEGQAEDAERL----LDDGCEPNVDTYTTLVRGLCGKGRC 669
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCRRV 554
A ++ + + I ++ C+ +
Sbjct: 670 YEADQLVESMKKKGLQPSEEIYRALLVGQCKNL 702
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 170/414 (41%), Gaps = 50/414 (12%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
A PN ++Y+ I+ +N +L+ +K N + LD+ Y +I +G
Sbjct: 441 AGPSPNV----ITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGG 496
Query: 134 NTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+ AFS+FNE+ + I P + N+++ + +D+AL +F +M G S+
Sbjct: 497 KLEHAFSLFNEMVEH--GISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGT 554
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ + I F + ++ + + ++ K+ ++ + I G CK R AFK+ E
Sbjct: 555 YNMMISGFSKTNRISEAENFCGKMVKQ--GLLPNVITYTSFIDGLCKNGRTSLAFKIFHE 612
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
++ R+ P+ Y + + G + E +L G P + Y + GL + R
Sbjct: 613 MKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGR 668
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNAL-IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
EA +L E + +++ AL +G +++ SA+ F+ M+ G P LS
Sbjct: 669 CYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLS---- 724
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
Y ++ LC + ++A + Q M +K
Sbjct: 725 -------------------------------DYKALICALCKANFRQKAQCMFQTMLKKH 753
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
+ D + L++ +E + +L M + C+ N +T +L + S +G
Sbjct: 754 WNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSALG 807
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 67/127 (52%)
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
EM G+ P++ +N++++ C + ++ A+ + +F G + TY LI + G
Sbjct: 192 EMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNG 251
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILS 544
++ A +F M++ G P++ TY++L+ GLC E L+ A ++ + ++ + +
Sbjct: 252 NLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYT 311
Query: 545 TFMISLC 551
++SLC
Sbjct: 312 IPIVSLC 318
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 128/559 (22%), Positives = 241/559 (43%), Gaps = 51/559 (9%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
KW P E+ L L LR + LV V+ + + + + FF WA+++ N+ H +Y
Sbjct: 1062 KWGPDAEKALEVLMLR--VDHWLVREVMKTDVGVN--VKMQFFRWAAKRRNYEHDTSTYM 1117
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKI-TLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
+++ L + Q + +++++ N I + + ++ L K ++A ++F ++K
Sbjct: 1118 ALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKT 1177
Query: 148 -NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFS-TIGFGVFIWKFCENAKL 205
C+ I + NS++ +L +G + ++++EMS G F T+ + I FC+ +
Sbjct: 1178 RKCQPIA-QAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRR 1236
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ +L+E+ +E M + I ++I F K A + +E+R + C+PD Y
Sbjct: 1237 DSAIQLLNEM--KEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYT 1294
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ G + E + ++ G P T I L R+ +A +L + + +
Sbjct: 1295 ELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETL 1354
Query: 326 KFTIDDDVLNALIGSV-------------------SSIDPRS------------------ 348
+ N +I ++ S I P S
Sbjct: 1355 RCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEK 1414
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A++ M EKG P + +L L K + D E+++ L N + Y VM+
Sbjct: 1415 AMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIK 1474
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L +GRL +A + EM + G PDV YN+LM R +L A +M GC
Sbjct: 1475 HLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIP 1534
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ +YNI+++ ++ G A+ + NM + V PD +Y ++L L + A ++
Sbjct: 1535 DINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLM 1594
Query: 529 NK----SVNHDVMLARSIL 543
+ +D++ SIL
Sbjct: 1595 KEMNTLGFEYDLITYSSIL 1613
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 162/383 (42%), Gaps = 43/383 (11%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLA 162
S+ ++++ D Y +I L + +A+ F E++ E P+ N+++
Sbjct: 1276 SLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQR--EGCRPDTVFMNNMIN 1333
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN-AKLGQVLSMLDEVRKRENS 221
L G +D+A+K+F EM S + + I E+ ++ +V S + R +E+
Sbjct: 1334 FLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFE--RMKESG 1391
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
+ S ++I GFCK R+E+A +L+E+ + P AY + +
Sbjct: 1392 ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLID------------ 1439
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALIGS 340
L K ++ +A CE +EL E S + ++ L G
Sbjct: 1440 -ALGKAKRYDLA-------------------CELFQELKENCGSSSARVYAVMIKHL-GK 1478
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+D AI F+ M + G P + + L L + DE + + + + D+
Sbjct: 1479 AGRLD--DAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDI 1536
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
SYN++++ L +G A ++ MK+ + PDV YN+++ A + A KL +
Sbjct: 1537 NSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKE 1596
Query: 461 MFASGCSGNLKTYNILISKFSEV 483
M G +L TY+ ++ +V
Sbjct: 1597 MNTLGFEYDLITYSSILEAIGKV 1619
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 108/263 (41%), Gaps = 5/263 (1%)
Query: 85 LSYHSILKSLSLSR-QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
++Y++I+K+L S+ + + + S +++K + I+ S Y +I + +KA +
Sbjct: 1361 VTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLE 1420
Query: 144 EVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
E+ P SL+ L D A ++F E+ S + V I +
Sbjct: 1421 EMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAG 1480
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+L ++M DE+ K + V A ++ G + ++EA + ++ C PD
Sbjct: 1481 RLDDAINMFDEMNKLGCAP---DVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDIN 1537
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
+Y I+ G +L ++ V P Y + L EA +L + +
Sbjct: 1538 SYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEM 1597
Query: 323 VSGKFTIDDDVLNALIGSVSSID 345
+ F D ++++ ++ +D
Sbjct: 1598 NTLGFEYDLITYSSILEAIGKVD 1620
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 127/508 (25%), Positives = 234/508 (46%), Gaps = 33/508 (6%)
Query: 39 HQLGLRDSLSPSLVARVINPYLLT-----HHSLALGFFNWASQQPNFTHSPLSYHSILKS 93
H R S +L R N LL H S ALGFF + +PN + S++ +L+
Sbjct: 84 HWAATRPGFSHTLFTR--NSLLLALVRGGHLSDALGFFQSSISEPNVS----SFNILLRG 137
Query: 94 LSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN-CEDI 152
+ ++++L+++K IT + + + I+ +L ++ KA S FN V N CE
Sbjct: 138 FAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCE-- 195
Query: 153 GPEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS 210
P + + V L ++ A +F+EM +G + I + I +K G+V
Sbjct: 196 -PTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGL---SKAGRV-- 249
Query: 211 MLDEVRKRENSMIN-----GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
DE RK + M+ +V I+ G CK R++EA K + E+R R +P Y
Sbjct: 250 --DEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYS 307
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + MG V + V+++ AP T Y FI L R EA+++ E +V
Sbjct: 308 FIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEK 367
Query: 326 KFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRV-PTLSTLSNLSKNLCKRNKSDEL 384
D +I + +A +++K V P + + K ++ +E
Sbjct: 368 GCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEA 427
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG--LDPDVSFYNSLM 442
+E+Y+ + + +YN +++ LC ++ EA +++EM+R+ L+P + Y+ ++
Sbjct: 428 LELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMII 487
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+ + A L +M +G + TY LI + G++ A+ L ML+ G+
Sbjct: 488 HGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIF 547
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNK 530
PD TY +L++ LC+ +++ AA+++ +
Sbjct: 548 PDDHTYGTLVQILCR-SDVDAAWDLLQE 574
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 188/488 (38%), Gaps = 86/488 (17%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSL----SLSRQINAIDSVLKQVKVNKITLDSSVY 122
ALGF++WA+ +P F+H+ + +S+L +L LS + S + + V+ +
Sbjct: 79 ALGFYHWAATRPGFSHTLFTRNSLLLALVRGGHLSDALGFFQSSISEPNVSSFNI----- 133
Query: 123 RFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSH 182
L++G + F E+ N+LL EM
Sbjct: 134 ------LLRGFAARDDF---------------EVVNALLR----------------EMKS 156
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV--RKRENSMINGSVIAVLIIHGFCKGK 240
RG+ + GV + C L + +S + V K E ++ +V+ + G CK
Sbjct: 157 RGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVL----VDGLCKAH 212
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+VE A V +E+ + KPD IAY + + G V E ++ G P Y
Sbjct: 213 KVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYT 272
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKG 360
+ GL RI E A+ M +
Sbjct: 273 SIVAGLCKCGRIQE----------------------------------AVKTIQEMRRRR 298
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P + T S + K ++ V + ++ D D SY + + L + GR EA
Sbjct: 299 LRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAE 358
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
V + M KG PD+ Y +++ C+E + A + M + N Y +++ F
Sbjct: 359 KVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGF 418
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
+ +E AL L+ +L+ G+ P TY +++ LC+ + A E+ + L
Sbjct: 419 VKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEP 478
Query: 541 SILSTFMI 548
SI++ MI
Sbjct: 479 SIVTYSMI 486
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 165/395 (41%), Gaps = 39/395 (9%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NSLL L G++ +AL F E + F + + F V ++L E++
Sbjct: 100 NSLLLALVRGGHLSDALGFFQSSIS---EPNVSSFNILLRGFAARDDFEVVNALLREMKS 156
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R + NG+ V I+ C + +++A + + +C+P Y ++ + V
Sbjct: 157 RGITS-NGATHGV-ILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKV 214
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
V ++ + G P Y I GL R+ EA++L
Sbjct: 215 ERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKL------------------- 255
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
+ M+ +G PT +++ LCK + E V+ + +
Sbjct: 256 ---------------VDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLR 300
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
+++Y+ +V+ G++ +A+ V++EM + PD Y +EA A+K+
Sbjct: 301 PRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKV 360
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
++ M GC ++ TY I+I F + G + A + M + V P+ YT +++G +
Sbjct: 361 FETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVK 420
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ L+ A E++ + + ++ + +T + +LC+
Sbjct: 421 SSRLEEALELYQRILKDGILPSTVTYNTVINALCK 455
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/514 (22%), Positives = 227/514 (44%), Gaps = 11/514 (2%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
+W L + L+ + L+P V +V+N L T AL FF WA +Q + H+ +Y
Sbjct: 165 QWECLQDNFLNSMA--QDLNPDAVVKVLN--LQTDAQNALRFFQWADKQEGYDHNTDAYF 220
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSV-YRFIIPSLIQG--KNTQKAFSVFNEV 145
+++ L ++ + S+L++++ + S+ + F++ G K + +AF++ E+
Sbjct: 221 TMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEM 280
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ I NS+L L + +D A +F +M + GV + + + I F K+
Sbjct: 281 GYEPGLIDTAY-NSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKM 339
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ +LD++ +N+ V ++I CK K +E+A+ VL ++R C+P+ Y
Sbjct: 340 EDAMKLLDDMI--QNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYN 397
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + + E ++ + GV P Y GL RR+ AKE+ ++
Sbjct: 398 ALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALAR 457
Query: 326 KFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ N L+ G A+ M + P T + L + L + N+ +
Sbjct: 458 GLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDA 517
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+ ++ + Y + ++ N++ L G ++A + MK +G S Y +
Sbjct: 518 LRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHC 577
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
+ A+ L +M G S NL TYN +I F G ++ A + + M+E G+ PD
Sbjct: 578 LSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPD 637
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+Y L++ + Q A +++ ++ V+L
Sbjct: 638 TGSYNILIKEFHNQGRTQDADQLYATALERGVVL 671
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 2/208 (0%)
Query: 347 RSAIVFFNFMIEKGRVPTL--STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
+ ++ FN M E G P L + +++ +L K K D ++ + N + +Y
Sbjct: 268 KESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYT 327
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
M+ ++ +A ++ +M + PDV Y ++ A C+ ++ A + +M +
Sbjct: 328 SMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMREN 387
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
GC N+ TYN LI V E AL L M + GV P+ TYT L GLC+ L A
Sbjct: 388 GCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRA 447
Query: 525 FEVFNKSVNHDVMLARSILSTFMISLCR 552
E+FN+++ + R +T + CR
Sbjct: 448 KEMFNEALARGLKPNRVTYNTLLNGYCR 475
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 124/490 (25%), Positives = 200/490 (40%), Gaps = 58/490 (11%)
Query: 60 LLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKV---NKIT 116
L+ S AL FFNWA + FTH+ SY +L+ L +R +N + L +K +
Sbjct: 95 LIKTPSKALQFFNWAPEL-GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVK 153
Query: 117 LDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNAL 174
L+ + +I S + Q++ VFN +K + P + NSLL +L G + A
Sbjct: 154 LEDRFFNSLIRSYGKAGLFQESVQVFNSMK--SVGVSPSVVTFNSLLLILLKRGRTNMAQ 211
Query: 175 KMFDEM-SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLII 233
+FDEM S GV T F + +I
Sbjct: 212 SVFDEMLSTYGVTPDTYTFNI-------------------------------------LI 234
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK--KRKLG 291
GFCK V+E F+ E+ +C PD + Y + + G V V+ K+
Sbjct: 235 RGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTN 294
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI- 350
+ P Y + G ++ I EA + E +VS ++ N LI + + I
Sbjct: 295 LNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIK 354
Query: 351 -VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+F + G +P TL+ L C ++ +EV++ + + D +Y+V++
Sbjct: 355 QIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRN 414
Query: 410 LCTSGRLREAYGVIQEMKRK-------GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
LC G A + E+ K G P V+ Y S+ E CR A++++ Q+
Sbjct: 415 LCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLM 474
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G L ++ ILI G E L ML + PD TY SL++GL Q+
Sbjct: 475 KRGTQDPL-SFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPL 533
Query: 523 AAFEVFNKSV 532
A++ K +
Sbjct: 534 VAYQTLEKMI 543
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 3/206 (1%)
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
VF + G P T + L + CK + DE +K +S D+ +YN +V L
Sbjct: 213 VFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGL 272
Query: 411 CTSGRLREAYGVIQEMKRKG--LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C +G++ A+ V+ M +K L+PDV Y +L+ C + + A ++++M + G
Sbjct: 273 CRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKP 332
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKG-VAPDATTYTSLLEGLCQETNLQAAFEV 527
N TYN LI EV +I+ ++F L G PD T +L+ C NL A EV
Sbjct: 333 NEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEV 392
Query: 528 FNKSVNHDVMLARSILSTFMISLCRR 553
F K + +V + S + +LC+R
Sbjct: 393 FEKMMVLNVRPDSATYSVLIRNLCQR 418
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+N ++ +G +E+ V MK G+ P V +NSL+ + A+ ++D+M
Sbjct: 159 FNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEML 218
Query: 463 AS-GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
++ G + + T+NILI F + ++ R F M PD TY +L++GLC+ +
Sbjct: 219 STYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKV 278
Query: 522 QAAFEVFNKSVNHDVMLARSILS 544
A V N V L +++
Sbjct: 279 NIAHNVVNGMVKKSTNLNPDVVT 301
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 70/395 (17%), Positives = 157/395 (39%), Gaps = 48/395 (12%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N ++Y ++++ + +I+ V +++ + + Y +I L + + K
Sbjct: 294 NLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKI 353
Query: 139 FSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+F E P+ C N+L+ + G +++AL++F++M V + + V I
Sbjct: 354 KQIF-EGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLI 412
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG-----FCKGKRVEEAFKVLDE 251
C+ + + DE+ ++E + + ++ + C+ + +A +V +
Sbjct: 413 RNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQ 472
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFERE---VVLKKKRKLGVAPRTNDYREFILGLIV 308
L R + D ++++I+ + G+ FE +VL +R P Y+ I GL+
Sbjct: 473 LMKRGTQ-DPLSFKILIKGHCREGT-FEAGYELLVLMLRRDF--VPDLETYQSLIDGLLQ 528
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTL 368
+ A + E ++ + ++++ + + F ++ +G++ L
Sbjct: 529 KGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAKGCAHESARFIMLMLEGKIRQNINL 588
Query: 369 SNLS-KNLCKRNKSDELVEVYKVLSANDYFTDME------SYN----------------- 404
S + + L D+ ++ +L AN Y DME S+N
Sbjct: 589 STHTVRLLFGSGLRDKAFKIVGLLYANGYVVDMEELIGFLSHNRKFLLAHKLLLFCLEKH 648
Query: 405 ---------VMVSFLCTSGRLREAYGVIQEMKRKG 430
++ LC R EA+G+ E+ KG
Sbjct: 649 QNVDIDMCDTVIEGLCKMKRHSEAFGLYYELVEKG 683
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 129/577 (22%), Positives = 227/577 (39%), Gaps = 114/577 (19%)
Query: 1 MTMRPATDLATRISQAIISA--SNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINP 58
+T+R T L I +I +N RP + + L TLHQ+
Sbjct: 5 VTLRSETQLVQNICATVIKGGWNNLLRP-KICSILTASTLHQV----------------L 47
Query: 59 YLLTHHS----LALGFFNW-ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVN 113
Y L+ HS L+ F W S PN+ HS S +++ L+ + + S+L+++
Sbjct: 48 YQLSLHSQGPCLSWALFKWIESSIPNYKHSLQSSWTMIHILTKFKHLKTAQSLLEKIAYR 107
Query: 114 KI-----------------TLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI 156
++S V+ +++ K Q+A VF + N
Sbjct: 108 DFLSTQSVLSALVRLHDDPDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHA 167
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
C LL LA D D K++ +M+ GVE + + V
Sbjct: 168 CTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNV---------------------- 205
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+IH CK VE+A +L E+ + PD Y + + G
Sbjct: 206 ---------------LIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGM 250
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+E V + + G+ P Y I G E R+ EA L + I
Sbjct: 251 HYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEI-------------- 296
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ P T + L C+ N D+ + + + + A
Sbjct: 297 ----------------------RDATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGL 334
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ + +YN ++ LC GR+R+A ++ EM K ++PD N+L+ A C+ ++ A K
Sbjct: 335 YPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALK 394
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ ++M +G + TY LI F ++ E++GA L +ML+ G +P TY+ L++G C
Sbjct: 395 VKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYC 454
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ N +A ++ ++ V + + +S+ + C+R
Sbjct: 455 NQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKR 491
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 160/380 (42%), Gaps = 16/380 (4%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+C L+ L G +A ++ G + + +C +L D
Sbjct: 76 LCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRL-------DAA 128
Query: 216 RKRENSMI--NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
R+ SM + II G C RV +A +LD++ R C+P + Y ++ E
Sbjct: 129 RRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCK 188
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID--- 330
E VL + R G P Y I G+ E R+ +AKE+ + S F D
Sbjct: 189 SSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVS 248
Query: 331 -DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
VL L + D + V F M++K VP T L + C+ + ++V +
Sbjct: 249 YTTVLKGLCAARRWDDVK---VLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQ 305
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+S + + N++++ +C GR+ +AY + M G +PD Y +++ CR
Sbjct: 306 QMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAG 365
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
AK+L +M C N T+N I + G IE A++L M E G + TY
Sbjct: 366 RWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYN 425
Query: 510 SLLEGLCQETNLQAAFEVFN 529
+L+ G C + + +A E+FN
Sbjct: 426 ALVHGFCVQGRVDSALELFN 445
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/471 (21%), Positives = 201/471 (42%), Gaps = 10/471 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y I++ L ++ ++L + Y ++ ++ + +A +V +E+
Sbjct: 143 TYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEM 202
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ + P I N ++ + +G +D+A ++ + +S G + + + + C
Sbjct: 203 RA--KGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAAR 260
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ V + E+ ++ + V +++ FC+G VE A +VL ++ C P+
Sbjct: 261 RWDDVKVLFAEMVDKK--CVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTL 318
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
IV G V + L G P T Y + GL R AKEL +V
Sbjct: 319 CNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMV 378
Query: 324 SGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
++ N I + AI M E G + T + L C + + D
Sbjct: 379 RKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVD 438
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
+E++ L + +Y +++ LC + RL A ++ M +K + +N L+
Sbjct: 439 SALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLV 495
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
C++ + A +L +QM GC+ NL T+N L+ ++ E AL L H ++ KGV+
Sbjct: 496 SFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVS 555
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
D TY+S+++ L +E + A ++ + + + + + + +LC+R
Sbjct: 556 LDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKR 606
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/458 (21%), Positives = 199/458 (43%), Gaps = 10/458 (2%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S ++Y +L+++ S +VL +++ T + Y II + + A +
Sbjct: 175 SVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEIL 234
Query: 143 NEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
N + + P+I + ++L L + D+ +F EM + + + F + + FC
Sbjct: 235 N--RLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFC 292
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + + +L ++ ++ + + ++I+ CK RV++A+ L+ + + C PD
Sbjct: 293 RGGMVERAIQVLQQMS--QHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 350
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
I+Y V G + +L + + P + FI L + I +A +L E
Sbjct: 351 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIE 410
Query: 321 VIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
++ ++ NAL+ G SA+ FN + + P T + L LC
Sbjct: 411 LMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAE 467
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ D E+ + D + ++NV+VSF C G + EA ++ +M G P++ +N
Sbjct: 468 RLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFN 527
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+L++ ++ A +L + + G S + TY+ ++ S E A+++ H + +
Sbjct: 528 TLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDM 587
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
G+ P Y +L LC+ A + F V++ M
Sbjct: 588 GMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCM 625
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 174/427 (40%), Gaps = 12/427 (2%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F +SY ++LK L +R+ + + + ++ K + + ++ +G ++A
Sbjct: 241 GFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERA 300
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
V ++ + +CN ++ + G +D+A + M G TI + +
Sbjct: 301 IQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRG 360
Query: 199 FCENAKLGQVLSMLDE-VRKR--ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
C + +L E VRK N + + I +L C+ +E+A K+++ +
Sbjct: 361 LCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICIL-----CQKGLIEQAIKLIELMPEY 415
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
C + Y + F + G V + L+ L P T Y + GL R+ A
Sbjct: 416 GCSVGIVTYNALVHGFCVQGRV---DSALELFNNLPCEPNTITYTTLLTGLCHAERLDAA 472
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
EL ++ ++ N L+ A+ N M+E G P L T + L
Sbjct: 473 AELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDG 532
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
+ K S+E +E+ L + D +Y+ +V L R EA ++ ++ G+ P
Sbjct: 533 ITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPK 592
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V YN ++ A C+ A + M ++GC N TY ILI + G ++ A +
Sbjct: 593 VGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLS 652
Query: 495 NMLEKGV 501
+ KGV
Sbjct: 653 ELYAKGV 659
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 139/326 (42%), Gaps = 4/326 (1%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I C+ R +A +VL D AY + + G + + + +
Sbjct: 80 LIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRL---DAARRLIASMP 136
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAI 350
V P Y I GL R+ +A L + ++ L+ +V S A+
Sbjct: 137 VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAM 196
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ M KG P + T + + +C+ + D+ E+ LS+ + D+ SY ++ L
Sbjct: 197 NVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGL 256
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C + R + + EM K P+ ++ L+ CR ++ A ++ QM GC+ N
Sbjct: 257 CAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNT 316
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
NI+I+ + G ++ A +NM G PD +YT++L GLC+ + A E+ +
Sbjct: 317 TLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPE 376
Query: 531 SVNHDVMLARSILSTFMISLCRRVLI 556
V + +TF+ LC++ LI
Sbjct: 377 MVRKNCPPNEVTFNTFICILCQKGLI 402
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 32/190 (16%)
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS---------- 408
+G P + + L +NLC+R ++ + V + A+ D+ +YN +V+
Sbjct: 68 RGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDA 127
Query: 409 ----------------------FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
LC GR+ +A ++ +M ++G P V Y L+EA C
Sbjct: 128 ARRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVC 187
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ A + D+M A GC+ N+ TYN++I+ G ++ A + + + G PD
Sbjct: 188 KSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIV 247
Query: 507 TYTSLLEGLC 516
+YT++L+GLC
Sbjct: 248 SYTTVLKGLC 257
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
+ L R+ E + + S+ D+ ++ LC GR +A V++ + G
Sbjct: 47 RRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAP 106
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
DV YN+L+ CR L A++L M + TY +I + G + AL L
Sbjct: 107 VDVFAYNTLVAGYCRYGRLDAARRLIASMPV---PPDAYTYTPIIRGLCDRGRVGDALAL 163
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ML++G P TYT LLE +C+ + A V ++
Sbjct: 164 LDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDE 201
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L EA +++ +G PDV L+ CR A ++ ASG ++ YN
Sbjct: 55 LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
L++ + G ++ A RL +M V PDA TYT ++ GLC + A + + +
Sbjct: 115 LVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG 171
Query: 536 VMLARSILSTFMISLCR 552
+ + + ++C+
Sbjct: 172 CQPSVVTYTVLLEAVCK 188
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 185/404 (45%), Gaps = 9/404 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALK 175
D+ + +I L + +A F++ F P + +++ L G A
Sbjct: 164 DAVTFNTLINGLCKVGKFAQAVEFFDD--FEASGCQPTVYTYTTIINGLCKIGETTAAAG 221
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIH 234
+F +M G + + + + + I C++ + + L + ++ + I+ + +I
Sbjct: 222 LFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKR---ISPDIFTYNSLIQ 278
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
G C +R +EA +L+E+ P+ + ++ + G V E + V K ++GV P
Sbjct: 279 GLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEP 338
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFF 353
Y + G + I EA++L + +++ D N LI G + A F
Sbjct: 339 DVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLF 398
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
N MI +G P + L LC+ + E +++K + +N D+ +Y++++ C
Sbjct: 399 NEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKE 458
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G L +A+ + + M+ L PD++ YN L++A C+ L+ A+KL+ ++F G N++ Y
Sbjct: 459 GYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIY 518
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+I+ + G ++ AL F NM G PD +Y ++ G Q
Sbjct: 519 TTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQ 562
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/481 (23%), Positives = 213/481 (44%), Gaps = 24/481 (4%)
Query: 64 HSLALGFFNWASQQPNFTH----SPL----SYHSILKSL-SLSRQINAIDSVLKQVKVNK 114
H A F N +F H PL + +L ++ + + A+ S+ KQ+++
Sbjct: 66 HDDASSFRNIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAG 125
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEIC--NSLLAVLASDGYID 171
++ D +I + AFSVF++ +K + P+ N+L+ L G
Sbjct: 126 LSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQ---PDAVTFNTLINGLCKVGKFA 182
Query: 172 NALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV- 230
A++ FD+ G + + + I C K+G+ + +K E + +V+
Sbjct: 183 QAVEFFDDFEASGCQPTVYTYTTIINGLC---KIGETTAAAGLFKKMEEAGCQPNVVTYN 239
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I CK K V EA + ++ + PD Y + + E +L + L
Sbjct: 240 ILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSL 299
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL---NALIGSVSSIDPR 347
+ P + + + E ++ EA+ + + + + ++ DV+ + + G ++
Sbjct: 300 NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMT--EMGVEPDVVTYSSLMYGYSLRMEIV 357
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A F+ MI KG P + + L K CK + DE +++ + D +YN ++
Sbjct: 358 EARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLI 417
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
LC GRLREA + + M G PD+ Y+ L++ C+E L A +L+ M ++
Sbjct: 418 HGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLK 477
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
++ YNILI + G ++ A +LF + +G+ P+ YT+++ LC+E L A E
Sbjct: 478 PDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEA 537
Query: 528 F 528
F
Sbjct: 538 F 538
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 176/392 (44%), Gaps = 11/392 (2%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D A +F +M G++ + F I C+ K Q + D+ E S +V
Sbjct: 146 VDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDF---EASGCQPTVYT 202
Query: 230 -VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF---KLMGSVFEREVVLK 285
II+G CK A + ++ C+P+ + Y I+ + KL+ + +K
Sbjct: 203 YTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMK 262
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID 345
KR ++P Y I GL RR EA L + S + N L+ ++
Sbjct: 263 AKR---ISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEG 319
Query: 346 PRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
S A F M E G P + T S+L R + E +++ + D SYN
Sbjct: 320 KVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYN 379
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
+++ C + R+ EA + EM +GL PD YN+L+ C+ LR A+ L+ M ++
Sbjct: 380 ILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSN 439
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G +L TY++L+ F + G + A RLF M + PD Y L++ +C+ NL+ A
Sbjct: 440 GNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDA 499
Query: 525 FEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
++F++ ++ I +T + +LC+ L+
Sbjct: 500 RKLFSELFVQGLLPNVQIYTTIINNLCKEGLL 531
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 172/397 (43%), Gaps = 17/397 (4%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEIC--NSLLAVLASDGYIDNALKM 176
Y II L + T A +F ++ E+ G P + N L+ L D ++ AL +
Sbjct: 202 TYTTIINGLCKIGETTAAAGLFKKM----EEAGCQPNVVTYNILIDSLCKDKLVNEALDI 257
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
F M + + + I C + + ++L+E+ N M N VL+
Sbjct: 258 FSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSL-NIMPNIFTFNVLV-DAI 315
Query: 237 CKGKRVEEA---FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
CK +V EA FK + E+ + +PD + Y + + L + E + G
Sbjct: 316 CKEGKVSEAQGVFKTMTEMGV---EPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCK 372
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVF 352
P Y I G +RI EAK+L ++ T D+ N LI + + R A
Sbjct: 373 PDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDL 432
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F M G +P L T S L CK + +++V+ + D+ YN+++ +C
Sbjct: 433 FKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCK 492
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G L++A + E+ +GL P+V Y +++ C+E LL A + + M GC + +
Sbjct: 493 FGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFS 552
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
YN++I F + + A +L M ++G +A T T
Sbjct: 553 YNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTT 589
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 138/303 (45%), Gaps = 1/303 (0%)
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
++ + PD I+ + F + V V K KLG+ P + I GL
Sbjct: 120 QMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVG 179
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLS 369
+ +A E + + +I + I +A F M E G P + T +
Sbjct: 180 KFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYN 239
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
L +LCK +E ++++ + A D+ +YN ++ LC R +EA ++ EM
Sbjct: 240 ILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSL 299
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
+ P++ +N L++A C+E + A+ ++ M G ++ TY+ L+ +S EI A
Sbjct: 300 NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEA 359
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
+LF M+ KG PDA +Y L++G C+ + A ++FN+ ++ + +T +
Sbjct: 360 RKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHG 419
Query: 550 LCR 552
LC+
Sbjct: 420 LCQ 422
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Query: 415 RLREAYGVI----QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
++ + YG + ++M+ GL PD+ + L++ + A ++ +M G +
Sbjct: 106 KMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDA 165
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
T+N LI+ +VG+ A+ F + G P TYT+++ GLC+ AA +F K
Sbjct: 166 VTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKK 225
Query: 531 SVNHDVMLARSILSTFMISLCRRVLI 556
+ + SLC+ L+
Sbjct: 226 MEEAGCQPNVVTYNILIDSLCKDKLV 251
>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 780
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 137/585 (23%), Positives = 253/585 (43%), Gaps = 63/585 (10%)
Query: 13 ISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFN 72
IS +IS + +P P LE L LS +++ VI + + L FF
Sbjct: 33 ISGEVISILAKKKPIE---PALEP------LVPFLSKNIITSVIKEEV--NRQLGFRFFI 81
Query: 73 WASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQG 132
WAS++ S S+ ++ LS + L+++K +++DS + +I + +
Sbjct: 82 WASRRERL-RSGESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKM 140
Query: 133 KNTQKAFSVFNEVK-FNCEDIGPEI--CNSLLAVLA-SDGYIDNALKMFDEMSHRGVEFS 188
+KA F +K F+C P++ N +L ++ D + A +++EM +
Sbjct: 141 GLAEKAVESFGRMKEFDCR---PDVFTYNVILRIMMREDVFFMLAFAVYNEMLKCNCSPN 197
Query: 189 TIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKV 248
FG+ + + + M D++ R S V ++I G C+ E+A K+
Sbjct: 198 LYTFGILMDGLYKKGRTSDAQKMFDDMTGRGIS--PNRVTYTILISGLCQRGSPEDARKL 255
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
E++ PD +A+ + + F +G + E +L+ K G Y I GL
Sbjct: 256 FYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFR 315
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLST 367
RR +A EL ++ D + LI +S A+ M KG P
Sbjct: 316 ARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYC 375
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ + K LC R +E + +S + F D ++ +++ +C +G +R+A + E++
Sbjct: 376 YNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIE 435
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM-------------------------- 461
+ G P V+ +N+L++ C+ L+ A+ L +M
Sbjct: 436 KSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMVQS 495
Query: 462 ------------FA-SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
FA +G S ++ +YN+LI+ F G+I+GAL+L + + KG++PD+ TY
Sbjct: 496 GSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTY 555
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+L+ GL + + AF++F D + ++ + M CRR
Sbjct: 556 NTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRR 598
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/472 (20%), Positives = 183/472 (38%), Gaps = 91/472 (19%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
+R +I + Q+++S N +FN I ++++LA I+ AL+
Sbjct: 7 FRSVIQFYSKPSWMQRSYSSGN-AEFN-------ISGEVISILAKKKPIEPALEPLVPFL 58
Query: 182 HRGVEFSTI--------GFGVFIW-----KFCENAKLGQVLSMLDEVRK----------- 217
+ + S I GF FIW + G V+ ML E
Sbjct: 59 SKNIITSVIKEEVNRQLGFRFFIWASRRERLRSGESFGLVIDMLSEDNGCDLYWQTLEEL 118
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY----RIVAEEFKL 273
+ + S ++I + K E+A + ++ +C+PD Y RI+ E
Sbjct: 119 KSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMREDVF 178
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
F V + K +P + + GL + R +A+++
Sbjct: 179 FMLAF---AVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKM--------------- 220
Query: 334 LNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
F+ M +G P T + L LC+R ++ +++ + A
Sbjct: 221 -------------------FDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKA 261
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ + D ++N ++ C GR+ EA+ +++ ++ G + Y+SL++ R
Sbjct: 262 SGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQ 321
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A +L+ M ++ Y ILI S+ G+IE AL+L +M KG+ PD Y ++++
Sbjct: 322 AFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIK 381
Query: 514 GLCQETNLQ---------AAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
LC L+ + E F + H +++ S+CR L+
Sbjct: 382 ALCGRGLLEEGRSLQLEMSETESFPDACTHTILIC---------SMCRNGLV 424
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 187/398 (46%), Gaps = 14/398 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSH-RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
NS+LA LA + +++ M V + +G+ + C+ ++G L +LD +
Sbjct: 140 NSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMS 199
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL--RIRECKPDFIAYRIVAEEFKLM 274
+++ + V ++ G CK RV+EA +++ + C P+ + Y + + F +
Sbjct: 200 RQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRV 259
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA----KELGEVIVSGKFTID 330
G++ +++K GV + GL R A +E V GK +
Sbjct: 260 GNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKG--N 317
Query: 331 DDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
+ L+G++ + + A+ F+ + +G P + L + + ++ +
Sbjct: 318 AVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMAS 377
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+ + D ++YN++++ C RL EAY ++QEMK G+ PDV YN+L+ C+
Sbjct: 378 SMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAG 437
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
+L +M GC ++ T+ L+ + +VG+I+ ALR+ +M E G+ P+ Y
Sbjct: 438 DFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYN 497
Query: 510 SLLEGLCQETNLQAAFEVFN----KSVNHDVMLARSIL 543
+L++ LC+ ++ A E+F+ KSV +V ++L
Sbjct: 498 TLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALL 535
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/486 (20%), Positives = 187/486 (38%), Gaps = 51/486 (10%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVK-VNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
+++SIL +L+ R + + + ++ + D Y ++ L + A V +
Sbjct: 137 FAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLD 196
Query: 144 EVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEM--SHRGVEFSTIGFGVFIWKF 199
+ DI P++ N+++ L G + AL ++ S G +T+ + I F
Sbjct: 197 GMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAF 256
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRI--RE 256
C ++G + + V K EN + +++ + I+ G C+ R A + E R E
Sbjct: 257 C---RVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPE 313
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
K + + Y + +V + +K G +P Y I GL R+ +A
Sbjct: 314 GKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDAC 373
Query: 317 ELGEVIVSGKFTIDDDVLNALI------------------------------------GS 340
+ + F +D N LI GS
Sbjct: 374 SMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGS 433
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ D + MI+ G P++ T L CK K DE + + + + + +
Sbjct: 434 CKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNN 493
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
YN ++ FLC G + A + EMK K + +V+ +N+L++ +++ A +L DQ
Sbjct: 494 VIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQ 553
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLF----HNMLEKGVAPDATTYTSLLEGLC 516
M C + T ++L+ +GE + R H ++ V+ + Y GL
Sbjct: 554 MREERCFPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHTASKRIVSDRTSAYFHFATGLA 613
Query: 517 QETNLQ 522
+ L
Sbjct: 614 ETFTLH 619
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 208/464 (44%), Gaps = 17/464 (3%)
Query: 75 SQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN 134
QP+ T ++ ++++ L + +I + ++ + Y +I L + N
Sbjct: 135 GHQPDAT----TFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGN 190
Query: 135 TQKAFSVFNEV-KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
T A + + + NC+ P + ++L+ L D + A +F EM +G+ + +
Sbjct: 191 TSAAIRLLRSMEQGNCQ---PNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLD 250
+ I C+ + V ++++E+ +S I V + ++ CK V EA V+D
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMV---DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVD 304
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
+ R +P+ + Y + + L V V Y I G +
Sbjct: 305 MMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQ 364
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLS 369
+ +A L E + + T + N LI + + + AI F+ M+ +G++P L T
Sbjct: 365 SVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYR 424
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
LS LCK D+ + + K + +++ D++ Y ++ +C +G L +A + + K
Sbjct: 425 TLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSK 484
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
GL P+V YN ++ C++ LL A KL+ +M +GCS N TYN++ F E
Sbjct: 485 GLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRT 544
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNL-QAAFEVFNKSV 532
+ L ML +G + D +T T+LL G+ + L Q+ ++ K V
Sbjct: 545 IELLEEMLARGFSVDVST-TTLLVGMLSDDGLDQSVKQILCKYV 587
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 205/467 (43%), Gaps = 8/467 (1%)
Query: 67 ALGFFN-WASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
AL FN +QP S + ++ +L S++ ++ + + S+ +Q+ I D +
Sbjct: 54 ALSTFNRMLHKQP--PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIV 111
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
I SL AFS ++ +L+ L +G I AL +FD+M G
Sbjct: 112 INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 171
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEE 244
+ + + +G I C K+G + + +R E +V+ +I CK ++V E
Sbjct: 172 QPNVVTYGTLINGLC---KVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
AF + E+ + P+ + Y + + ++ + + P +
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVP 363
L E + EA ++ ++++ + NAL+ G + A+ F+ M+ K V
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ + + L CK D+ + +++ +S + + +YN ++ LC GRL++A +
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
EM +G PD+ Y +L + C+ L A L + S +++ Y ++
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
GE+E A LF N+ KG+ P+ TY ++ GLC++ L A ++F++
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSE 515
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 165/365 (45%), Gaps = 5/365 (1%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D AL F+ M H+ ST+ F + + +LS+ R+ ++ I V
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSL---SRQMDSFGIPPDVYT 107
Query: 230 V-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+ ++I+ C RV+ AF L ++ +PD + + + G + E + K
Sbjct: 108 LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 167
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPR 347
G P Y I GL A L + G + V + LI S+
Sbjct: 168 GEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVT 227
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A F+ MI KG P + T ++L LCK + + + + + D+ + N +V
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 287
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
LC G + EA+ V+ M +G++P+V YN+LM+ C + + A K++D M C
Sbjct: 288 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 347
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N+ +YN LI+ + ++ ++ A+ LF M + + P+ TY +L+ GLC LQ A +
Sbjct: 348 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 407
Query: 528 FNKSV 532
F++ V
Sbjct: 408 FHEMV 412
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 105/223 (47%), Gaps = 1/223 (0%)
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEK-GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N L+ S++ S ++ + ++ G P + TL+ + +LC N+ D +
Sbjct: 74 NRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILK 133
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ D ++ ++ LC G++ EA + +M +G P+V Y +L+ C+
Sbjct: 134 LGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSA 193
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A +L M C N+ ++ LI + ++ A +F M+ KG++P+ TY SL+
Sbjct: 194 AIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIH 253
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
GLC+ + + N+ V+ +M L+T + +LC+ ++
Sbjct: 254 GLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMV 296
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 99/204 (48%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ FN M+ K P+ + L ++ K L+ + + + + D+ + ++++
Sbjct: 54 ALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVIN 113
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC R+ A+ + ++ + G PD + + +L+ C E + A L+D+M G
Sbjct: 114 SLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQP 173
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ TY LI+ +VG A+RL +M + P+ +++L++ LC++ + AF +F
Sbjct: 174 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIF 233
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
++ + + ++ + LC+
Sbjct: 234 SEMITKGISPNIVTYNSLIHGLCK 257
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 95/187 (50%), Gaps = 6/187 (3%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
+++ G P +T + L + LC K E + ++ + + ++ +Y +++ LC G
Sbjct: 131 ILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGN 190
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
A +++ M++ P+V +++L+++ C++ + A ++ +M G S N+ TYN
Sbjct: 191 TSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNS 250
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI ++ E + L + M++ + PD T ++++ LC+E + A +V D
Sbjct: 251 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVV------D 304
Query: 536 VMLARSI 542
+M+ R +
Sbjct: 305 MMIHRGV 311
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 58/137 (42%)
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L EA M K P +N L+ + + L QM + G ++ T I
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
+I+ + ++ A +L+ G PDATT+T+L+ GLC E + A +F+K +
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 536 VMLARSILSTFMISLCR 552
T + LC+
Sbjct: 171 FQPNVVTYGTLINGLCK 187
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 172/375 (45%), Gaps = 5/375 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L G + AL D++ +G + + + + I C K+G + +RK
Sbjct: 381 NTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVC---KIGDTRGAIKLLRK 437
Query: 218 RENSMINGSV-IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+ + +V + II CK + V EA+ + E+ ++ D + Y + F ++G
Sbjct: 438 IDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGK 497
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ E +L + + P Y + L E ++ EAK + V++ D N
Sbjct: 498 LKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNT 557
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
L+ G + + + A FN M G P + T + L CK DE + ++K + +
Sbjct: 558 LMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKN 617
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D +Y+ +V LC SGR+ + +I EM+ +G DV YNSL++ C+ L A
Sbjct: 618 MVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAI 677
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L+++M G N T+ IL+ + G ++ A +F ++L KG D Y ++ G
Sbjct: 678 ALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGH 737
Query: 516 CQETNLQAAFEVFNK 530
C++ L+ A + +K
Sbjct: 738 CKQGLLEEALTMLSK 752
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 177/393 (45%), Gaps = 11/393 (2%)
Query: 167 DGY-----IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE-VRKREN 220
DGY + A +F+ MS GV + + I FC+ ++ + L++ E + R
Sbjct: 246 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFP 305
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
+I + I + F K K A + L ++ +PD I+ F MG +
Sbjct: 306 PIIQFNKI----LDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFG 361
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
VL K K G P T I GL ++ ++ +A + +++ F ++ LI
Sbjct: 362 FSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLING 421
Query: 341 VSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
V I D R AI + + P + S + LCK E ++ ++ D
Sbjct: 422 VCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISAD 481
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ +Y+ ++ C G+L+EA G++ EM K ++PDV Y L++A +E ++ AK +
Sbjct: 482 VVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLA 541
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
M + ++ TYN L++ + V E++ A +F+ M GV PD TYT L+ G C+
Sbjct: 542 VMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSK 601
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ A +F + +++ S+ + LC+
Sbjct: 602 MVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCK 634
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 110/509 (21%), Positives = 228/509 (44%), Gaps = 53/509 (10%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++ ++++K L L Q+ ++ L+ Y +I + + +T+ A +
Sbjct: 64 VTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRK 123
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ E+ N+++ L + A +F EM+ +G+ + + + I+ FC K
Sbjct: 124 IDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGK 183
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIREC-KPDFI 262
L + L +L+ + + IN +V +++ CK +V+EA VL + ++ C K + I
Sbjct: 184 LKEALGLLNVMVLKT---INPNVCTYNILVDALCKEGKVKEAKSVL-AVMLKACVKSNVI 239
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + + L+ V + + V +GV P + Y I G +R+ +A L + +
Sbjct: 240 TYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEM 299
Query: 323 VSGKFT--------------------------------IDDDV--LNALIGSVSSIDPRS 348
+ +F I D+ LN LI +
Sbjct: 300 ILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQ-- 357
Query: 349 AIVFFNF-----MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ F F ++++G P+ TL+ L K LC + + + + + L A + + SY
Sbjct: 358 --ITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSY 415
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+++ +C G R A +++++ + P+V Y+++++A C+ L+ A L+ +M
Sbjct: 416 ATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTV 475
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G S ++ TY+ LI F VG+++ A+ L + M+ K + PD TYT L++ L +E ++
Sbjct: 476 KGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKE 535
Query: 524 AFEV----FNKSVNHDVMLARSILSTFMI 548
A V V DV ++++ +++
Sbjct: 536 AKSVLAVMLKACVKPDVFTYNTLMNGYLL 564
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/466 (21%), Positives = 201/466 (43%), Gaps = 46/466 (9%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
+ S ++ ++++K L L Q+ ++ L+ Y +I + + +T+ A
Sbjct: 373 YPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAI 432
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+ ++ E+ ++++ L + A +F EM+ +G+ + + I+ F
Sbjct: 433 KLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGF 492
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSV-IAVLIIHGFCKGKRVEEAFKVLDELRIREC- 257
C KL + + +L+E+ + IN V +++ K +V+EA VL + ++ C
Sbjct: 493 CIVGKLKEAIGLLNEMVLKT---INPDVRTYTILVDALGKEGKVKEAKSVL-AVMLKACV 548
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
KPD Y + + L+ V + + V +GV P + Y I G C++K
Sbjct: 549 KPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF------CKSKM 602
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ E A+ F M +K VP T S+L LCK
Sbjct: 603 VDE----------------------------ALNLFKEMHQKNMVPDTVTYSSLVDGLCK 634
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ + ++ + D+ +YN ++ LC +G L +A + +MK +G+ P+
Sbjct: 635 SGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFT 694
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
+ L++ C+ L+ A++++ + G ++ YN++I + G +E AL + M
Sbjct: 695 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKME 754
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
E G P+A T+ ++ L ++ A ++ + M+AR +L
Sbjct: 755 ENGCIPNAVTFDIIINALFKKDENDKAEKLLRQ------MIARGLL 794
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 121/251 (48%), Gaps = 1/251 (0%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
VL K K G P T I GL ++ ++ EA + +++ F ++ LI V
Sbjct: 50 VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVC 109
Query: 343 SI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
I D R+AI F + + P + + + LCK E ++ ++ ++
Sbjct: 110 RIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVV 169
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y+ ++ C G+L+EA G++ M K ++P+V YN L++A C+E ++ AK + M
Sbjct: 170 TYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVM 229
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ N+ TY+ L+ + V E++ A +F+ M GV PD +Y ++ G C+ +
Sbjct: 230 LKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRV 289
Query: 522 QAAFEVFNKSV 532
A +F + +
Sbjct: 290 DKALNLFKEMI 300
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 101/189 (53%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
S+ ++D ++ ++++G P TL+ L K LC + + E + + L A + +
Sbjct: 38 SIQNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLN 97
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
SY +++ +C G R A ++++ + P+V YN++++A C+ L+ A L+
Sbjct: 98 QVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFS 157
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M G S N+ TY+ LI F VG+++ AL L + M+ K + P+ TY L++ LC+E
Sbjct: 158 EMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEG 217
Query: 520 NLQAAFEVF 528
++ A V
Sbjct: 218 KVKEAKSVL 226
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
V+ ++ ++G PD N+L++ C + ++ A D++ A G N +Y LI+
Sbjct: 50 VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVC 109
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN----KSVNHDVM 537
+G+ A++ + + P+ Y ++++ LC+ + A+ +F+ K ++ +V+
Sbjct: 110 RIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVV 169
Query: 538 LARSILSTFMI 548
+++ F I
Sbjct: 170 TYSTLIYGFCI 180
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 210/467 (44%), Gaps = 24/467 (5%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A+ FN Q N T + ++ IL SL S+ + + S+ +Q++ I + + +I
Sbjct: 52 AVSLFNSLLHQ-NPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILI 110
Query: 127 PSLIQGKNTQKAFSVFNEV-KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHR 183
Q AFSV ++ K E P+I N+ + G I AL D++
Sbjct: 111 NCFCQLGLIPFAFSVLAKILKMGYE---PDIITLNTFIKGFCLKGQIHQALNFHDKLVAL 167
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN-GSVIAVLIIHGFCKGKRV 242
G + +G I C K+G+ + L +R+ + ++ +V+ +I G K K V
Sbjct: 168 GFHLDQVSYGTLINGLC---KVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHV 224
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
+AF + E+ + PD + Y + F ++G + + + K + P +
Sbjct: 225 NDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNIL 284
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGR 361
+ G E R+ +AK + ++++ + N L+ G + F M+++G
Sbjct: 285 VDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGI 344
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P + T +L C + ++ +++ +S ++ SYN+M++ C ++ +A
Sbjct: 345 KPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMK 404
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+ EM K + PDV YNSL++ C+ + A +L ++M G N+ TYN +++
Sbjct: 405 LFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNA-- 462
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
L + ++G+ P+ T T L++GLCQ L+AA +VF
Sbjct: 463 ----------LLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVF 499
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 195/434 (44%), Gaps = 15/434 (3%)
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
I + + A S+FN + + N +L L + L + +M G+
Sbjct: 40 ISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGI 99
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR--ENSMINGSVIAVLIIHGFCKGKRVE 243
+ + F + I FC+ + S+L ++ K E +I + I GFC ++
Sbjct: 100 NPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTF----IKGFCLKGQIH 155
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
+A D+L D ++Y + +G +L++ V Y I
Sbjct: 156 QALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVI 215
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRV 362
G+ ++ + +A +L +V+ + + D +ALI + + AI FN MI +
Sbjct: 216 DGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIK 275
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + T + L CK + + V ++ D ++ ++N +V C +++E V
Sbjct: 276 PDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTV 335
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
M ++G+ P+V Y SLM+ C + AKK+++ M G + N+ +YNI+I+ F +
Sbjct: 336 FAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCK 395
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD------V 536
+ +++ A++LF M K + PD TY SL++GLC+ + AF++ N+ HD +
Sbjct: 396 IKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEM--HDRGQPPNI 453
Query: 537 MLARSILSTFMISL 550
+ SIL+ + L
Sbjct: 454 ITYNSILNALLTKL 467
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 100/197 (50%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
+++ G P + TL+ K C + + + + + L A + D SY +++ LC G
Sbjct: 129 ILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGE 188
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
R A +++ + K + + YN++++ ++ + A L+ +M A S ++ TY+
Sbjct: 189 TRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSA 248
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI F VG+++ A+ LF+ M+ + + PD T+ L++G C+E L+ A V + + D
Sbjct: 249 LIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQD 308
Query: 536 VMLARSILSTFMISLCR 552
+ S +T + C+
Sbjct: 309 IKPNVSTFNTLVDGFCK 325
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 164/351 (46%), Gaps = 21/351 (5%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
F +SY +++ L + A +L++V + L++ +Y +I + + K+ AF
Sbjct: 169 FHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAF 228
Query: 140 SVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
+++E+ + I P++ ++L+ G + +A+ +F++M ++ F + +
Sbjct: 229 DLYSEMV--AKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVD 286
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
FC+ +L + ++LD + ++ N S L+ GFCK ++++E V + +
Sbjct: 287 GFCKEGRLKKAKNVLDMMMIQDIKP-NVSTFNTLV-DGFCKDRKMKEGKTVFAMMMKQGI 344
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
KP+ + Y + + + L+ V + + + + GV + Y I G +++ +A +
Sbjct: 345 KPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMK 404
Query: 318 LGEVIVSGKFTIDDDV-LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
L + + K I D V N+LI G S A N M ++G+ P + T +++ L
Sbjct: 405 L-FIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNAL 463
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
+ K D+ ++ +M + +++ LC SG+L A V +++
Sbjct: 464 LTKLK-DQGIQ-----------PNMHTDTILIKGLCQSGKLEAARKVFEDL 502
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 124/292 (42%), Gaps = 39/292 (13%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWASQQ-----------PNFTHSPLSYHSILKSLS 95
L +VA+ I+P ++T+ +L GFF + N +++ ++
Sbjct: 230 LYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFC 289
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
++ +VL + + I + S + ++ + + ++ +VF + + I P
Sbjct: 290 KEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMM--KQGIKPN 347
Query: 156 ICN--SLLAVLASDGY-----IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV 208
+ SL+ DGY ++ A K+F+ MS RGV + + + I FC+ K+ +
Sbjct: 348 VVTYCSLM-----DGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKA 402
Query: 209 LSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVA 268
+ + E+ + +I V +I G CK ++ AF++++E+ R P+ I Y +
Sbjct: 403 MKLFIEMHHKH--IIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSIL 460
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+L K + G+ P + I GL ++ A+++ E
Sbjct: 461 ------------NALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFE 500
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 51/115 (44%)
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
+N ++ + + L QM G + N T+NILI+ F ++G I A + +L
Sbjct: 71 FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL 130
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ G PD T + ++G C + + A +K V L + T + LC+
Sbjct: 131 KMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCK 185
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 212/467 (45%), Gaps = 8/467 (1%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A+ FN ++ N T ++ IL SL S+ + + + ++++ I + +I
Sbjct: 69 AVSLFNRLLRR-NTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILI 127
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAV-LASDGYIDNALKMFDEMSHRGV 185
Q AFSVF ++ + I + L+ L G I A D++ G
Sbjct: 128 NCFCQLGLIPFAFSVFAKI-LKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGF 186
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEE 244
F I +G I C K+G+ + LD +++ + +++ +V+ II CK K V E
Sbjct: 187 HFDQISYGTLIHGLC---KVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNE 243
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
AF + E+ + PD + Y + F ++G + + + K + P + +
Sbjct: 244 AFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVN 303
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVP 363
+ ++ E K + ++++ + N+L+ + + A FN M + G P
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ + S + CK K DE + ++K + + D+ +Y+ ++ L SGR+ A ++
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+M +G+ P++ YNS+++A C+ + A L + G ++ TY+ILI +
Sbjct: 424 DQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQS 483
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
G++E A ++F ++L KG D YT +++G C E A + +K
Sbjct: 484 GKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSK 530
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/496 (22%), Positives = 216/496 (43%), Gaps = 31/496 (6%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
F ++S + NF +SY S + + ++ S+ ++ T + + I+
Sbjct: 38 FNFIPYSSSKINF----ISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILG 93
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGV 185
SL++ K+ + +++F I P + CN L+ G I A +F ++ G
Sbjct: 94 SLVKSKHYHTVLYLSQKMEF--RGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGY 151
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRV 242
TI F C ++ Q D+V + + G+ +IHG CK
Sbjct: 152 VPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGT-----LIHGLCKVGET 206
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAE---EFKLMGSVFE--REVVLKKKRKLGVAPRTN 297
A +L + +P+ + Y + + + KL+ F+ E+V K G++P
Sbjct: 207 RAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSK-----GISPDVV 261
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFM 356
Y I G + ++ +A +L ++ D N L+ + + F+ M
Sbjct: 262 TYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM 321
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
+++G P T ++L C + ++ ++ ++ D++SY++M++ C +
Sbjct: 322 MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF 381
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
EA + +EM RK + PDV Y+SL++ + + A +L DQM G N+ TYN +
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSI 441
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN----KSV 532
+ + +++ A+ L +KG PD +TY+ L++GLCQ L+ A +VF K
Sbjct: 442 LDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGY 501
Query: 533 NHDVMLARSILSTFMI 548
N DV ++ F +
Sbjct: 502 NLDVYAYTIMIQGFCV 517
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 197/426 (46%), Gaps = 18/426 (4%)
Query: 133 KNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
KNT FN + ++ I +S S+ +D+A+ +F+ + R F
Sbjct: 34 KNTH-----FNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEF 88
Query: 193 GVFIWKFCENAKLGQVLSMLD--EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD 250
+ ++ VL + E R + +++N +++ I+ FC+ + AF V
Sbjct: 89 NKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL----INCFCQLGLIPFAFSVFA 144
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
++ PD I + +++ L G + + + K LG Y I GL
Sbjct: 145 KILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLC--- 201
Query: 311 RICEAKELGEVI--VSGKFTIDDDVL-NALIGSVSSID-PRSAIVFFNFMIEKGRVPTLS 366
++ E + +++ V G + V+ N +I S+ + A F+ M+ KG P +
Sbjct: 202 KVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVV 261
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T S L C K + ++++ + + D+ ++N++V+ C G+++E V M
Sbjct: 262 TYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM 321
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
++G+ P+ YNSLM+ C + AK +++ M G + ++++Y+I+I+ F ++ +
Sbjct: 322 MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF 381
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
+ A+ LF M K + PD TY+SL++GL + + A ++ ++ + V ++
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSI 441
Query: 547 MISLCR 552
+ +LC+
Sbjct: 442 LDALCK 447
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 187/418 (44%), Gaps = 3/418 (0%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+++ ++ K L L QI +V D Y +I L + T+ A +
Sbjct: 156 ITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQR 215
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
V N + N+++ + ++ A +F EM +G+ + + I FC K
Sbjct: 216 VDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGK 275
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + + +++ EN + +L+ + FCK +++E V D + + KP+F+ Y
Sbjct: 276 LKDAIDLFNKMI-LENIKPDVYTFNILV-NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTY 333
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + + L+ V + + + + GV P Y I G ++ EA L + +
Sbjct: 334 NSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHR 393
Query: 325 GKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
D ++LI +S S A+ + M ++G P + T +++ LCK ++ D+
Sbjct: 394 KNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDK 453
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ + + D+ +Y++++ LC SG+L +A V +++ KG + DV Y +++
Sbjct: 454 AIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQ 513
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
C E L A L +M +GC + KTY I+I + E + A +L M+ +G+
Sbjct: 514 GFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
FNF+ + S+ S N D+ V ++ L + +N ++ L
Sbjct: 38 FNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVK 97
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
S + Q+M+ +G+ P++ N L+ C+ L+ A ++ ++ G + T
Sbjct: 98 SKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTIT 157
Query: 473 YNILISKFSEVGEIEGALRLFHN-MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
+ L G+I+ A LFH+ ++ G D +Y +L+ GLC+ +AA ++ +
Sbjct: 158 FTTLSKGLCLKGQIQQAF-LFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV 216
Query: 532 VNHDVMLARSILSTFMISLCRRVLI 556
+ V + +T + S+C+ L+
Sbjct: 217 DGNLVQPNVVMYNTIIDSMCKVKLV 241
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/480 (22%), Positives = 212/480 (44%), Gaps = 25/480 (5%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++++L +I +VL ++ +Y I+ + +G + A V ++
Sbjct: 124 TYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDL 183
Query: 146 KF-NCE-DIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
C D+G CN +L + G +D AL + ++ G E + + + C
Sbjct: 184 HARGCALDVGN--CNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAK 241
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ G V +++E+ R N LI + C+ E +VL ++ C PD
Sbjct: 242 RWGCVQELMEEM-VRMACPPNIVTFNTLISY-LCRNGLFERVHEVLAQMAEHGCTPDIRM 299
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + G + +L + G+ P Y + GL R E +EL +
Sbjct: 300 YATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMF 359
Query: 324 SGKFTIDDDVLNALI------GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+DD N L+ G V + I M+ G +P + T + + CK
Sbjct: 360 DKDCPLDDVTFNILVDFFCQNGLVDRV-----IELLEQMLVHGCMPDVITYTTVINGFCK 414
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
DE V + K ++A + SY +++ LC++ R +A ++ +M ++G +
Sbjct: 415 EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPIT 474
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
+N+L+ C++ L+ A +L QM +GCS +L +Y+ +I + G+ + AL L + M+
Sbjct: 475 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 534
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK----SVNHDVMLARSILSTFMISLCRR 553
KG++P+ Y+S+ L +E + ++F+ ++ D +L +++S SLC+R
Sbjct: 535 NKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVIS----SLCKR 590
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/458 (20%), Positives = 201/458 (43%), Gaps = 44/458 (9%)
Query: 78 PNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
P+F P +SY+++LK L ++++ + +++++ + + +I L +
Sbjct: 219 PSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLF 278
Query: 136 QKAFSVFNEV-KFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
++ V ++ + C P+I +++ + +G++ A ++ + M G++ + + +
Sbjct: 279 ERVHEVLAQMAEHGCT---PDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCY 335
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
+ C + + +L E+ ++ + V +++ FC+ V+ ++L+++
Sbjct: 336 NTLLKGLCSAERWEETEELLAEMFDKDCPL--DDVTFNILVDFFCQNGLVDRVIELLEQM 393
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
+ C PD I Y V F G + E ++LK G P T Y + GL R
Sbjct: 394 LVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERW 453
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
+A +D+++ +I ++P + NF
Sbjct: 454 VDA---------------EDLMSQMIQQGCPLNPITFNTLINF----------------- 481
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
LCK+ ++ +E+ K + N D+ SY+ ++ L +G+ EA ++ M KG+
Sbjct: 482 --LCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMS 539
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P+ Y+S+ A RE + +++D + + + YN +IS + GE E A+
Sbjct: 540 PNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEF 599
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
M+ G P+ +TYT L+ GL E ++ A E+ +
Sbjct: 600 LAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTE 637
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 158/363 (43%), Gaps = 5/363 (1%)
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
+ C ++ L++LDE+ +R + I + +I+ C+G A +VL++L R
Sbjct: 129 VRALCARGRIADALAVLDEMPRRGCAPI--PPMYHVILEAACRGGGFRSAVRVLEDLHAR 186
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
C D +V GSV + +L+ G P Y + GL + +R
Sbjct: 187 GCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCV 246
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSV--SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+EL E +V + N LI + + + R V M E G P + + +
Sbjct: 247 QELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQ-MAEHGCTPDIRMYATIID 305
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
+CK E+ + + ++ YN ++ LC++ R E ++ EM K
Sbjct: 306 GICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPL 365
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
D +N L++ C+ L+ +L +QM GC ++ TY +I+ F + G I+ A+ L
Sbjct: 366 DDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLL 425
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+M G P+ +YT +L+GLC A ++ ++ + L +T + LC++
Sbjct: 426 KSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKK 485
Query: 554 VLI 556
L+
Sbjct: 486 GLV 488
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN MV+ C +G+L A + + + P+ Y ++ A C + A + D+M
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
GC+ Y++++ G A+R+ ++ +G A D +L +C + ++
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 523 AAFEVF 528
A +
Sbjct: 210 KALHLL 215
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 193/424 (45%), Gaps = 11/424 (2%)
Query: 137 KAFSVFNEVKFNCEDIGP-EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
+AFSVFN + + + P N+LL +A + + ++ MS G+ I +
Sbjct: 75 EAFSVFNHL-IDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNIL 133
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
I +C K+ L++L E+ +R +S +V ++ G C G R+ EA +L ++
Sbjct: 134 INCYCNLNKVDFGLAVLGEMLRRGHS--PNTVTFTSLVKGLCLGSRISEATGLLRKMVRM 191
Query: 256 ECKPDFIAYRIVAEEFKLMG----SVFEREVVLKKKRKLGVAPRTN--DYREFILGLIVE 309
+P+ + Y + + G +V E +L GV + N Y I L +
Sbjct: 192 GYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKD 251
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTL 368
I + KEL + + D +++I G + A FN M+++G P + T
Sbjct: 252 GLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTF 311
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ L LCK K +E + K++ D +YN ++ C GR+ +A + M+
Sbjct: 312 NVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMES 371
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
KG++ D YN L+ C+ + AKKL+ +M + TYN L++ G++
Sbjct: 372 KGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRD 431
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
A LF M + P++ TY LL+GLC+ +L A E+F+ NHD + I + +
Sbjct: 432 AWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLID 491
Query: 549 SLCR 552
LC+
Sbjct: 492 GLCK 495
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 196/472 (41%), Gaps = 46/472 (9%)
Query: 82 HSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
HSP +++ S++K L L +I+ +L+++ + Y ++ L NT A
Sbjct: 158 HSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAV 217
Query: 140 SVFNEVKFNCEDIGPEICNSLLAV------LASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
+ E+ G I +L+ L DG ID ++F EM RG+ + +
Sbjct: 218 KLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYS 277
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
IIHG C R E A + +E+
Sbjct: 278 S-------------------------------------IIHGMCHTGRWEGAKGLFNEMV 300
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
P+ + + ++ + G + E +LK + G +P T Y I G +E RI
Sbjct: 301 DEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRID 360
Query: 314 EAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
+A++L + S D N LI G S A + M+ K +PT+ T + L
Sbjct: 361 DARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLL 420
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
L + K + ++ + +D + +YN+++ LC + L EA + ++
Sbjct: 421 TGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQ 480
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P + +N L++ C+ + A++L++++ G N+ TY ++I + G++E A L
Sbjct: 481 PSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDL 540
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILS 544
F M EKG AP+ T+ +L+ G CQ +Q E+ + D S +S
Sbjct: 541 FLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTIS 592
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 161/395 (40%), Gaps = 11/395 (2%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PN + Y +I+ SL I+ + ++K I+ D Y II + +
Sbjct: 235 KPNL----VCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWE 290
Query: 137 KAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
A +FNE+ E + P + N L+ L G ++ A + M RG T +
Sbjct: 291 GAKGLFNEMVD--EGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNT 348
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
I FC ++ + V + +V ++I+G+CK R+ EA K+ E+
Sbjct: 349 LIDGFCLEGRIDDARDLF--VSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMC 406
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
+E P I Y + G V + + + + + P + Y + GL + E
Sbjct: 407 KEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSE 466
Query: 315 AKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
A EL + + F + N LI G + A FN + +G P + T + +
Sbjct: 467 AMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIH 526
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
LCK + + +++ + ++ ++N ++ C + +++ ++QEM K P
Sbjct: 527 GLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSP 586
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
D S + +++ +++ R L A G +G
Sbjct: 587 DASTISIVVDLLSKDEKYREYLHLLPTFPAQGQTG 621
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 41/214 (19%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A FN +I+ P +S+ + L + K + +++ +YK +S D + N++++
Sbjct: 76 AFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILIN 135
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C ++ V+ EM R+G P+ + SL++ C
Sbjct: 136 CYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLC---------------------- 173
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
L S+ SE A L M+ G P+ TY +LL GLC N A ++
Sbjct: 174 -------LGSRISE------ATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLH 220
Query: 529 NKSVNHDVMLARSI------LSTFMISLCRRVLI 556
+ +N + +I T + SLC+ LI
Sbjct: 221 EEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLI 254
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 187/398 (46%), Gaps = 14/398 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSH-RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
NS+LA LA + +++ M V + +G+ + C+ ++G L +LD +
Sbjct: 140 NSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMS 199
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL--RIRECKPDFIAYRIVAEEFKLM 274
+++ + V ++ G CK RV+EA +++ + C P+ + Y + + F +
Sbjct: 200 RQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRV 259
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA----KELGEVIVSGKFTID 330
G++ +++K GV + GL R A +E V GK +
Sbjct: 260 GNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKG--N 317
Query: 331 DDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
+ L+G++ + + A+ F+ + +G P + L + + ++ +
Sbjct: 318 AVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMAS 377
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+ + D ++YN++++ C RL EAY ++QEMK G+ PDV YN+L+ C+
Sbjct: 378 SMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAG 437
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
+L +M GC ++ T+ L+ + +VG+I+ ALR+ +M E G+ P+ Y
Sbjct: 438 DFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYN 497
Query: 510 SLLEGLCQETNLQAAFEVFN----KSVNHDVMLARSIL 543
+L++ LC+ ++ A E+F+ KSV +V ++L
Sbjct: 498 TLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALL 535
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 178/440 (40%), Gaps = 12/440 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVK-VNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
+++SIL +L+ R + + + ++ + D Y ++ L + A V +
Sbjct: 137 FAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLD 196
Query: 144 EVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEM--SHRGVEFSTIGFGVFIWKF 199
+ DI P++ N+++ L G + AL ++ S G +T+ + I F
Sbjct: 197 GMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAF 256
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRI--RE 256
C ++G + + V K EN + +++ + I+ G C+ R A + E R E
Sbjct: 257 C---RVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPE 313
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
K + + Y + +V + +K G +P Y I GL R+ +A
Sbjct: 314 GKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDAC 373
Query: 317 ELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ + F +D N LI G A M E G P + T + L
Sbjct: 374 SMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGS 433
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
CK + E+ + + + ++ +V C G++ EA +++ M G+ P+
Sbjct: 434 CKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNN 493
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YN+L++ C+ + A +L+D+M N+ T+N L+ + E A L
Sbjct: 494 VIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQ 553
Query: 496 MLEKGVAPDATTYTSLLEGL 515
M E+ PD T L+E L
Sbjct: 554 MREERCFPDYVTVDVLMEWL 573
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 113/489 (23%), Positives = 207/489 (42%), Gaps = 55/489 (11%)
Query: 67 ALGFFNWASQQ---PNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
A F+ +QQ PN ++Y+S++ +L +R ++ +L+Q+ N + D+ Y
Sbjct: 230 ACDLFHEMTQQGVPPNV----VTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYN 285
Query: 124 FIIPSLIQGKNT----QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDE 179
+LI G +T ++A +F E+ C++ +A L G I+ A + FD
Sbjct: 286 ----TLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDS 341
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M +G + + I + + + L +S L + R+ + N V +L+ +G+ K
Sbjct: 342 MLAKGHKLNIISYSTLLHGYATAGCLVD-MSNLFNLMVRDGIVPNQHVFNILV-NGYAKC 399
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
V EA + ++++ R PD + Y V F MGS+ + GV P Y
Sbjct: 400 GMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVY 459
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
+ I G + +A+EL V I K
Sbjct: 460 QCLIQGFCTHGDLVKAEEL----------------------VYEIR------------NK 485
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P + + ++L +LCK + E ++ ++ D+ + ++ C G++ EA
Sbjct: 486 GLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEA 545
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ V M G++PD+ Y +L+ CC+ + L+ ++ G TY I++
Sbjct: 546 FRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDG 605
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK----SVNHD 535
G A +F M+E G+A TY+ LL GLC+ + A VF K +V D
Sbjct: 606 LFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFD 665
Query: 536 VMLARSILS 544
+++ ++S
Sbjct: 666 IVILNIMIS 674
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 210/480 (43%), Gaps = 23/480 (4%)
Query: 85 LSYHSILKSL-SLSRQINAIDSVLKQVKVNK-ITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
+SY ++LKS+ R A+D + VK + VY ++ L + +A +F
Sbjct: 175 ISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLF 234
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+E+ + + P + NS++ L +D A + +M GV+ + + I +
Sbjct: 235 HEM--TQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYS 292
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ Q + M E+ R +I +V + CK R+EEA + D + + K +
Sbjct: 293 TLGQWKQAVRMFKEMTSR--GVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLN 350
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
I+Y + + G + + + + G+ P + + + G + EA + E
Sbjct: 351 IISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFE 410
Query: 321 VIVSGKFTIDDDVLNAL-----IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ K ++ DVL L + S+D A+ FN MI+KG P + L +
Sbjct: 411 DM--QKRGLNPDVLTYLAVIHAFCRMGSMD--DAMDKFNHMIDKGVEPNFAVYQCLIQGF 466
Query: 376 CKRN---KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
C K++ELV Y++ + + S+ +++ LC GR+ EA + + R G
Sbjct: 467 CTHGDLVKAEELV--YEIRNKG-LGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEK 523
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
DV+ + SL++ C + A ++ D M + G ++ TY L++ + G I+ L L
Sbjct: 524 ADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLIL 583
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
F +L KGV P TY +L+GL AA E+F + + + + S + LCR
Sbjct: 584 FRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCR 643
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 190/436 (43%), Gaps = 17/436 (3%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY ++L + + + + ++ + + I + V+ ++ + ++A +F +
Sbjct: 352 ISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFED 411
Query: 145 VKFNCEDIGPEICNSLLAVLA--SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ + P++ L + A G +D+A+ F+ M +GVE + + I FC +
Sbjct: 412 MQK--RGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTH 469
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVI--AVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
L + ++ E+R N + ++ A LI H CK RV EA ++ D + K D
Sbjct: 470 GDLVKAEELVYEIR---NKGLGPCILSFASLINH-LCKEGRVFEAQRIFDMIIRTGEKAD 525
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA----K 316
+ + + + L+G + E V +G+ P Y + G RI + +
Sbjct: 526 VNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFR 585
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
EL V +L+ L + + + F MIE G T+ T S L LC
Sbjct: 586 ELLHKGVKPTTFTYGIILDGLFHAGRTAAAKE---MFQEMIESGIAVTIPTYSILLTGLC 642
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+ N ++E + V++ L A + D+ N+M+S + + R EA G+ + GL P V
Sbjct: 643 RNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQ 702
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
Y +ME +E + A+ ++ M SG S N+++ E GEI A +
Sbjct: 703 TYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRV 762
Query: 497 LEKGVAPDATTYTSLL 512
K + +A+T + LL
Sbjct: 763 DGKSILFEASTASMLL 778
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 68/178 (38%), Gaps = 48/178 (26%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE------------- 448
+Y++++ C + RL A+ + R+G+ DV +SL+ C
Sbjct: 105 TYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHR 164
Query: 449 ------------------------------DLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
D+LR A K GC N+ Y+ ++
Sbjct: 165 MPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQ-----GGGCPCNVVVYSTVVH 219
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+ G++ A LFH M ++GV P+ TY S++ LC+ + A + + V + V
Sbjct: 220 GLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGV 277
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR- 491
P V Y+ L++ CCR L A + + G ++ + L+ + + A+
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
LFH M E G PDA +Y+++L+ +C + Q A ++ +V
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQ 203
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 129/541 (23%), Positives = 218/541 (40%), Gaps = 64/541 (11%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQIN-AIDSVLKQVKVNKITLDSSVYRFII 126
L F +++ P PL H++ L LS + A+ L + + SS + ++
Sbjct: 85 LRLFLFSALSPRLRSRPLHAHAVSLLLRLSSHADEAMFDALADARAAGLPASSSAFAALV 144
Query: 127 PSLIQ-GKNTQ--KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR 183
+ G+N +AFS +E + + N++L L G I AL +++ M
Sbjct: 145 AAHSSAGRNADAVQAFSRMDEFQSRPTAF---VYNTILKALVDSGVILLALALYNRMVAA 201
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G + + V + C+ G L M DE+ R M N + VL+ C +++
Sbjct: 202 GCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDR-GIMPNVKIYTVLL-SSLCNAGKID 259
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV---FEREVVLKKKRKLGVAPRTNDYR 300
EA ++L ++ + C PD + Y +G V F+R V+L+ G A Y
Sbjct: 260 EAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDG---GFALGLKGYS 316
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK 359
I GL RR E + ++ + D + +I G + A+ F + M +K
Sbjct: 317 CLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKK 376
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G VP + + K LC + + + N+ D + +M+ LC G + EA
Sbjct: 377 GFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEA 436
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM------------------ 461
+ EM G DP V YN+L++ RE L A+ L+ +M
Sbjct: 437 MQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQ 496
Query: 462 ------------------------------FASGCSGNLKTYNILISKFSEVGEIEGALR 491
SG ++ TYN LI+ + ++GA+R
Sbjct: 497 VCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVR 556
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
LF + KG++PD TY +L++GL + A +F + + SI ++ M SLC
Sbjct: 557 LFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLC 616
Query: 552 R 552
R
Sbjct: 617 R 617
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 109/505 (21%), Positives = 204/505 (40%), Gaps = 63/505 (12%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++ L L ++N L ++ L Y +I L Q + + F +
Sbjct: 278 VTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKT 337
Query: 145 VKFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ +I P++ + + A G I++AL D M +G T + + C++
Sbjct: 338 MLE--RNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDH 395
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L + ++ E+ +N+++ S ++I G CK V+EA ++ DE+ C P +
Sbjct: 396 GDLERAHTLRSEML--QNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVM 453
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + F G + E +L K ++G P + LG ++C+++ L +++
Sbjct: 454 TYNALIDGFYREGRL-EEARMLFHKMEMGNNPSL--FLRLTLG---ANQVCDSESLRKLV 507
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
D+ + G V A +I+ G VP + T + L LCK D
Sbjct: 508 --------HDMCQS--GQV-----LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLD 552
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
V ++K L D +Y ++ L + R +A + Q + + G P +S YNS+M
Sbjct: 553 GAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMM 612
Query: 443 EACCREDLLRPAKKLW-------------------------DQMFASGCSGNLK------ 471
+ CR L A LW D G +K
Sbjct: 613 RSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYG 672
Query: 472 -----TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
Y I + +V + ALR+FH + E G+ L+ LC + NL AA +
Sbjct: 673 YISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVD 732
Query: 527 VFNKSVNHDVMLARSILSTFMISLC 551
+ +++ ++L++ + + + LC
Sbjct: 733 IMLYALSKSIILSQPVGNRLLRWLC 757
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 105/473 (22%), Positives = 193/473 (40%), Gaps = 24/473 (5%)
Query: 75 SQQPNFTHSPLS--YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQG 132
S+ F P + Y++ILK+L S I ++ ++ + + Y ++ L +
Sbjct: 161 SRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQ 220
Query: 133 KNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
A +F+E+ +I LL+ L + G ID A+++ M +G + +
Sbjct: 221 GMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTY 280
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
F+ C+ ++ + L V ++ G +I G + +R +E F +
Sbjct: 281 NAFLSGLCKVGRVNEAFQRL--VMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTM 338
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
R PD + Y I+ G + + L +K G P T Y + L +
Sbjct: 339 LERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDL 398
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVSS---IDPRSAIVFFNFMIEKGRVPTLSTLS 369
A L ++ +D +I + +D A+ F+ M E G PT+ T +
Sbjct: 399 ERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVD--EAMQIFDEMGEHGCDPTVMTYN 456
Query: 370 NLSKNLCKRNKSDELVEVYK--------------VLSANDYFTDMESYNVMVSFLCTSGR 415
L + + +E ++ L AN D ES +V +C SG+
Sbjct: 457 ALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQ-VCDSESLRKLVHDMCQSGQ 515
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ +AY +++ + G+ PDV YN+L+ C+ L A +L+ ++ G S + TY
Sbjct: 516 VLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
LI A+ LF N+L+ G +P + Y S++ LC+ L A ++
Sbjct: 576 LIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 110/243 (45%), Gaps = 35/243 (14%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ +N M+ G P +T + L LCK+ + + ++++ + +++ Y V++S
Sbjct: 191 ALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLS 250
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK----LWDQMFAS 464
LC +G++ EA ++ MK KG PD YN+ + C+ + A + L D FA
Sbjct: 251 SLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFAL 310
Query: 465 GCSG-------------------------------NLKTYNILISKFSEVGEIEGALRLF 493
G G ++ Y I+I +E G IE AL
Sbjct: 311 GLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFL 370
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
M +KG PD Y ++L+ LC +L+ A + ++ + ++++L + + + LC+R
Sbjct: 371 DVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKR 430
Query: 554 VLI 556
L+
Sbjct: 431 GLV 433
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 78/420 (18%), Positives = 158/420 (37%), Gaps = 55/420 (13%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL F + ++ F Y+++LK L + ++ ++ N + LDS+ +I
Sbjct: 366 ALSFLD-VMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMI 424
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFD--EMSHRG 184
L + +A +F+E+ + D N+L+ +G ++ A +F EM +
Sbjct: 425 CGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNP 484
Query: 185 VEFSTIGFGV-----------FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LI 232
F + G + C++ GQVL +R +S + V+ +
Sbjct: 485 SLFLRLTLGANQVCDSESLRKLVHDMCQS---GQVLKAYKLLRSIIDSGVVPDVVTYNTL 541
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I+G CK + ++ A ++ EL+++ PD I Y + + + ++ + + G
Sbjct: 542 INGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGS 601
Query: 293 APRTNDYREFILGLIVERRICEAKEL--------------GEVIVSGKFTIDDDVLNALI 338
+P + Y + L +++ +A L EV+ + I+D L+ +
Sbjct: 602 SPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGV 661
Query: 339 GSVSSIDPR-----------------------SAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ ID A+ F+ + E G T + + L L
Sbjct: 662 RELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYL 721
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C + V++ + N ++ +LC R ++A + M G D DV
Sbjct: 722 CWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQALAWRMHLVGYDMDV 781
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 177/388 (45%), Gaps = 13/388 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NSLL+ L G + ++F M V+ + +G+ + + C+ +G L +LD +
Sbjct: 135 NSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMSS 194
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE---CKPDFIAYRIVAEEFKLM 274
+ + VI ++ G CK R+++A +DE R+R+ C P+ + Y +A+ +
Sbjct: 195 PGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDE-RMRQVHGCAPNTVTYNCLADACCRV 253
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA------KELGEVIVSGKFT 328
G + ++++ K GV P + GL R+ A K + G
Sbjct: 254 GDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAV 313
Query: 329 IDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
+++A + + A+ F+ M ++G P + L + + + +
Sbjct: 314 TYSTLVSAFL---HCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIA 370
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+ + D ++YN+++ C RL EA+ + +EMK GL PDV YN+L+ C+
Sbjct: 371 ASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKA 430
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
+L M GC ++ T+ L+ + + G+ + AL++F +M E + P+ Y
Sbjct: 431 GDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIY 490
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+L++ LC+ + A ++F++ ++V
Sbjct: 491 NTLIDFLCKSREVDVAIKLFDEMRENNV 518
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 107/527 (20%), Positives = 194/527 (36%), Gaps = 59/527 (11%)
Query: 26 PARKWTPLLEQTLHQLGLRDSLSPS-------LVARVINPY---LLTHHSLALGFFNWAS 75
P+ +TP TLH L R + P L+AR +P SLA G +
Sbjct: 72 PSHAFTPASLATLHSLAARHCIPPPSASLLSKLLARFSSPADAASFLRDSLAAG-----A 126
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
P+ + +++S+L +L + + + + ++ + D Y ++ L +
Sbjct: 127 PAPDVS----TFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLV 182
Query: 136 QKAFSVFNEVKFNCEDIGPEIC-------------------------------------- 157
A V + + D+ +I
Sbjct: 183 GDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVT 242
Query: 158 -NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
N L G ID A ++ + M GV + I + C ++G L E R
Sbjct: 243 YNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKR 302
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+V ++ F V A ++ E+ + PD + Y + G
Sbjct: 303 TTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGR 362
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ + + +K G Y I G ++R+ EA +L E + D N
Sbjct: 363 LVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNT 422
Query: 337 LIGSVSSIDPRSAI-VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
L+ + SA+ MI+ G P++ T L CK K+DE +++++ +
Sbjct: 423 LLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEAR 482
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ YN ++ FLC S + A + EM+ + +V+ YN+L++ +++ A
Sbjct: 483 IQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAF 542
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+L DQM C+ + T ++L+ E+GE E EKG A
Sbjct: 543 ELMDQMKEERCTPDYVTMDVLMEWLPEIGETERLKCFMEQRDEKGGA 589
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 110/278 (39%), Gaps = 42/278 (15%)
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
L + + +G D N+L+ ++ + + R F M E P + T L LC
Sbjct: 118 LRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLC 177
Query: 377 KRNKSDELVEVYKVLSA--NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK--GLD 432
K + ++V +S+ +D D+ N +V LC GRL++A + E R+ G
Sbjct: 178 KAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCA 237
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS------------------------- 467
P+ YN L +ACCR + A ++ ++M G +
Sbjct: 238 PNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDF 297
Query: 468 ------------GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
GN TY+ L+S F + A+ LFH M ++G PDA Y +++ GL
Sbjct: 298 FREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGL 357
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
Q L A + L R + + CR+
Sbjct: 358 TQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRK 395
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/267 (18%), Positives = 110/267 (41%), Gaps = 38/267 (14%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
+LA+ F+ + Q + + Y +++ L+ + ++ ++ +K LD Y
Sbjct: 329 ALAMELFHEMADQ-GYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNI 387
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSH 182
+I + K +A +F E+K + P++ N+LL+ L G ++ M
Sbjct: 388 LIGGFCRKKRLHEAHQLFEEMKG--AGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMID 445
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSM---LDEVRKRENSMINGSVIAVL-------- 231
G + S + FG + +C+ K + L + + E R + N++I ++I L
Sbjct: 446 DGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDV 505
Query: 232 ----------------------IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
++ G E+AF+++D+++ C PD++ ++ E
Sbjct: 506 AIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLME 565
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRT 296
+G + ++++ + G A T
Sbjct: 566 WLPEIGETERLKCFMEQRDEKGGAKLT 592
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A L D + A + ++ T+N L+S G + G LF +M E V PD TY LL
Sbjct: 115 ASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLN 174
Query: 514 GLCQETNLQAAFEVFNK--SVNHDVMLARSILSTFMISLCR 552
LC+ + A +V ++ S DV IL+T + LC+
Sbjct: 175 RLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCK 215
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 114/509 (22%), Positives = 213/509 (41%), Gaps = 43/509 (8%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A+ +W Q N SY +++ + + V ++ V + D + Y +I
Sbjct: 170 AISLLDWMWSQ-NLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLI 228
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRG 184
+ + K ++ + +C + P + N ++ L G D +L++++ M+
Sbjct: 229 DGFFKHGDYDKGKEIWERLVKDCS-VYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNE 287
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
E + I CE + + + E+ E+S++ +V +++GFC+ +++E
Sbjct: 288 REKDMFTYSSLIHGLCEAGNIDGAVRVYKEIV--ESSLVVDAVTHNAMLNGFCRAGKIKE 345
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
+F++ + C+ ++Y I+ + G V E + + K G P + Y I
Sbjct: 346 SFELWMVMGKENCQT-VVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIH 404
Query: 305 GLIVERRI-----------------------------CEAKELGEVIV------SGKFTI 329
GL R+ C+ + E I + +
Sbjct: 405 GLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKL 464
Query: 330 DDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
D V N LI G V + AI FF M KG PT+ + + L K LCK + E
Sbjct: 465 DPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFV 524
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
K + ++ DM + ++++ LC ++ A + Q+ KG PD++ YN LM C
Sbjct: 525 KEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSV 584
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
L A +L+ M S C NL T N L+ +V + E A ++ +L+ G+ PD +Y
Sbjct: 585 CKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISY 644
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
++GLC + + A E N ++N ++
Sbjct: 645 NITIKGLCSCSRISDAIEFLNDALNRGIL 673
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 208/470 (44%), Gaps = 9/470 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY+++L + + + +S + + ++ + Y +I + + +KA S+ + +
Sbjct: 118 SYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWM 177
Query: 146 KFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+++ P++ +L+ + G + ALK+FDEMS RGV + + I F ++
Sbjct: 178 W--SQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHG 235
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ + + + K + S+ V ++I+G CK R +E+ ++ + + E + D
Sbjct: 236 DYDKGKEIWERLVK-DCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFT 294
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + G++ V K+ + + + + G +I E+ EL +V
Sbjct: 295 YSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELW--MV 352
Query: 324 SGKFTIDDDV-LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
GK V N LI G + AI + + +KG P +T L LCK +
Sbjct: 353 MGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRL 412
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
++ ++++K D +Y+ MV LC GR+ EA ++ +M ++G D N L
Sbjct: 413 NKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPL 472
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ R L A + +M GCS + +YN LI + A MLEK
Sbjct: 473 INGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEW 532
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
PD T + L++GLCQE ++ A ++ ++++ ++ + M LC
Sbjct: 533 KPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLC 582
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 110/525 (20%), Positives = 209/525 (39%), Gaps = 44/525 (8%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSL-SRQINAIDSVLKQVKVNKITLDSSVYRFI 125
AL F AS+ N +HS +H IL+ L+ SR ++ + ++ VK K V +
Sbjct: 29 ALSLFESASR--NKSHSAHVFHHILRRLAADSRLVSHVSRIVDIVKAQKCPCKEDVALTV 86
Query: 126 IPSLIQGKNTQKAFSVFNEVK--FNCE--------------------------------D 151
I + + K + KA F ++ F C+ D
Sbjct: 87 IKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMD 146
Query: 152 IGP--EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ P + N L+ + I+ A+ + D M + ++ +G I + L L
Sbjct: 147 VSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGAL 206
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK--PDFIAYRIV 267
+ DE+ R ++ ++I GF K ++ ++ + L +++C P+ + Y I+
Sbjct: 207 KVFDEMSVR--GVVADVTCYNMLIDGFFKHGDYDKGKEIWERL-VKDCSVYPNVVTYNIM 263
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
G E + ++ K Y I GL I A + + IV
Sbjct: 264 INGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSL 323
Query: 328 TIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
+D NA++ ++ K T+ + + L K L + K +E + +
Sbjct: 324 VVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFENGKVEEAISI 383
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
+++L + +Y V++ LC +GRL +A + +E + D Y+S+++ C+
Sbjct: 384 WELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCK 443
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
E + A + +QM G + N LI+ F ++E A+ F M KG +P +
Sbjct: 444 EGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVS 503
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
Y +L++GLC+ A+ + + + S M LC+
Sbjct: 504 YNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQ 548
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/401 (19%), Positives = 173/401 (43%), Gaps = 49/401 (12%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y S++ L + I+ V K++ + + +D+ + ++ + +++F ++
Sbjct: 293 FTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMV 352
Query: 145 V-KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ K NC+ + N L+ L +G ++ A+ +++ + +G + +GV I C+N
Sbjct: 353 MGKENCQTVVSY--NILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNG 410
Query: 204 KLGQVLSMLDEVRKRE--------NSMING--------SVIAVL---------------- 231
+L + L + E +SM++G I+++
Sbjct: 411 RLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCN 470
Query: 232 -IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV------AEEFKLMGSVFEREVVL 284
+I+GF + ++E+A E+ + C P ++Y + AE F S F +E++
Sbjct: 471 PLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYS-FVKEMLE 529
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
K+ + P + GL E++I A L + + F D + N L+ + S+
Sbjct: 530 KEWK-----PDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSV 584
Query: 345 -DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
A+ ++ M VP L T + L + L K ++ E++ + + D+ SY
Sbjct: 585 CKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISY 644
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
N+ + LC+ R+ +A + + +G+ P +N L+ A
Sbjct: 645 NITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRA 685
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 194/440 (44%), Gaps = 5/440 (1%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y+ L +L ++ ++ + ++ I LD S + +I +L + + A + E+
Sbjct: 126 YNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMA 185
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
+ +L+ +G ++ ALKM +M G + + V + FC+ ++
Sbjct: 186 NHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVE 245
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ L + EV E V +++GFC+ V +A ++D + + PD Y
Sbjct: 246 EALRFVLEVS--EEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNS 303
Query: 267 VAEEFKLMGSVFEREV-VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ +G FE+ + +L++ +P T Y I L E I A +L ++VS
Sbjct: 304 LISGMCKLGE-FEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSK 362
Query: 326 KFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
D N LI G S + A+ F M KG P T S L +LC + E
Sbjct: 363 GLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEA 422
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+ + K + ++ + YN ++ LC S R+ +A + +M+ G+ YN+L++
Sbjct: 423 LMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDG 482
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C+ + A +L DQM G + TYN L++ F VG+IE A + M G PD
Sbjct: 483 LCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPD 542
Query: 505 ATTYTSLLEGLCQETNLQAA 524
TY +L+ GLC+ + A
Sbjct: 543 IFTYGTLIGGLCRAGRVDVA 562
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/507 (22%), Positives = 227/507 (44%), Gaps = 37/507 (7%)
Query: 81 THSPLSYH-SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
TH PL + ++L L+ S ++I ++LKQ+K + +++ + +I S +
Sbjct: 51 THHPLPPNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLL 110
Query: 140 SVF-NEVKFN-------------CEDIGPEICNSLLAVLASDGYIDN------------- 172
+ NE+ F ED ++ L + + ++G + +
Sbjct: 111 KILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCK 170
Query: 173 ------ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
A+ M +EM++ G++ I F + F E L L M ++ + N S
Sbjct: 171 AHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVS 230
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
V ++++GFCK RVEEA + + E+ PD + + + F +G+V + ++
Sbjct: 231 V--KVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDF 288
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP 346
+ G P Y I G+ +A E+ + ++ + + + N LI ++ +
Sbjct: 289 MIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENE 348
Query: 347 -RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
+A ++ KG +P + T + L + LC D +E+++ + D +Y++
Sbjct: 349 IEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSI 408
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++ LC RL+EA +++EM+ G + YN+L++ C+ + A++++DQM G
Sbjct: 409 LIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLG 468
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
S + TYN LI + +E A +L M+ +G+ PD TY SLL C+ +++ A
Sbjct: 469 VSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAG 528
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCR 552
++ ++ T + LCR
Sbjct: 529 DIVQTMASNGCEPDIFTYGTLIGGLCR 555
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 165/375 (44%), Gaps = 6/375 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NSL++ + G + A+++ +M R +T+ + I C K ++ + D R
Sbjct: 302 NSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALC---KENEIEAATDLARI 358
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+ + V +I G C K + A ++ +E++ + CKPD Y I+ +
Sbjct: 359 LVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERR 418
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ E ++LK+ G A Y I GL RRI +A+E+ + + + N
Sbjct: 419 LKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNT 478
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G + A + MI +G P T ++L C+ ++ ++ + +++N
Sbjct: 479 LIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNG 538
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D+ +Y ++ LC +GR+ A +++ ++ KG+ YN +++A +
Sbjct: 539 CEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGM 598
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVG-EIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+L+ +M + T+ I+ G I+ A+ MLEKG+ P+ ++ L EG
Sbjct: 599 RLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEG 658
Query: 515 LCQETNLQAAFEVFN 529
LC + E+ N
Sbjct: 659 LCSLSMEDTLIELIN 673
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 144/323 (44%), Gaps = 12/323 (3%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+++++++ L LS+ + + +++K D Y +I SL + ++A + E+
Sbjct: 370 TFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEM 429
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + + N+L+ L I++A ++FD+M GV S++ + I C+N ++
Sbjct: 430 ESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRV 489
Query: 206 GQVLSMLDEV---RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+ ++D++ + + S++ FC+ +E+A ++ + C+PD
Sbjct: 490 EEASQLMDQMIMEGLKPDKFTYNSLLTY-----FCRVGDIEKAGDIVQTMASNGCEPDIF 544
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + G V +L+ + G+ + Y I L + +R E L +
Sbjct: 545 TYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREM 604
Query: 323 VSGKFTIDDDVLNALI--GSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+ K D + + ++ G + P + AI F M+EKG +P + L++ LC +
Sbjct: 605 ME-KSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLS 663
Query: 380 KSDELVEVYKVLSANDYFTDMES 402
D L+E+ ++ ++ E+
Sbjct: 664 MEDTLIELINMVMEKAQMSERET 686
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 109/450 (24%), Positives = 201/450 (44%), Gaps = 11/450 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNK-ITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y+ ++ L +R + VLK+++ K + D Y +I + +A + E
Sbjct: 43 TYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 102
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ + I P++ S++ L DG +D A +M EM +GVE F I +C
Sbjct: 103 MVTR-DGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNA 161
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
K+ + L + E+ +S V +I GFCK +E+A K+L + R+C P+ +
Sbjct: 162 RKVDEALKLYKEILT-SSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVV 220
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + G + + + ++ G P Y I GL ++ A+ L + +
Sbjct: 221 TYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEM 280
Query: 323 VSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
+ D NAL+ + A F M K +P T + L + C ++
Sbjct: 281 TATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRL 340
Query: 382 DE---LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+E L+E K + D D+ +Y+++V+ + R EA IQEM + + P+ Y
Sbjct: 341 EEARFLLENMKTAAGID--PDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTY 398
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
+SL++ C+ + A ++ M ++ T+N +I +G+++ A +L M
Sbjct: 399 SSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAA 458
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
G+ P TYT+LLEG + ++ A+E+F
Sbjct: 459 HGLEPGMVTYTTLLEGFSRTGRMEIAYELF 488
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 176/401 (43%), Gaps = 42/401 (10%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ V + C+ + +L E+R + S+ V +I+GFCK ++ A ++L E
Sbjct: 44 YNVVVNGLCKARLTSKAYEVLKEMRDGK-SVAPDLVTYSTVINGFCKQGEMDRACEILRE 102
Query: 252 LRIRE-CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL-GVAPRTNDYREFILGLIVE 309
+ R+ PD + Y V + G + +R + ++ KL GV P + I G
Sbjct: 103 MVTRDGIAPDVVTYTSVVDGLCRDGKM-DRACEMVREMKLKGVEPDKFTFSALITGWCNA 161
Query: 310 RRICEAKEL-GEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
R++ EA +L E++ S + D ALI G S + A+ M + VP + T
Sbjct: 162 RKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVT 221
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
S+L LCK D+ +++++ +++ ++ +Y ++ LC + ++ A ++ EM
Sbjct: 222 YSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT 281
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
PD YN+L++ CR + AK+L+ +M C + TY L+ F +E
Sbjct: 282 ATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLE 341
Query: 488 GALRLFHN------------------------------------MLEKGVAPDATTYTSL 511
A L N M+ + VAP+A TY+SL
Sbjct: 342 EARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSL 401
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++GLC+ + A EV VN V + ++ + +LCR
Sbjct: 402 IDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCR 442
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 158/341 (46%), Gaps = 7/341 (2%)
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
+ + + + I FC+ +L Q L+ +++R E N V +++G CK + +A++
Sbjct: 6 TVVTWTIIIDGFCKANQLKQALACFEKMR--EFVAPNERTYNV-VVNGLCKARLTSKAYE 62
Query: 248 VLDELRI-RECKPDFIAYRIVAEEFKLMGSVFER-EVVLKKKRKLGVAPRTNDYREFILG 305
VL E+R + PD + Y V F G + E++ + + G+AP Y + G
Sbjct: 63 VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFN-FMIEKGRVP 363
L + ++ A E+ + D +ALI G ++ A+ + + P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ T + L CK ++ +++ V+ ++ +Y+ ++ LC +G L +A +
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+ M KG P+V Y +L+ C + A+ L D+M A+ C + +YN L+ + +
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G IE A +LF M K PD TYT L+ G C + L+ A
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEA 343
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/411 (18%), Positives = 150/411 (36%), Gaps = 50/411 (12%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL + ++ ++Y +++ S + +L ++ K + Y ++
Sbjct: 167 ALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLL 226
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRG 184
L + + +A +F + + P + +L+ L + +D A + DEM+
Sbjct: 227 HGLCKAGDLDQALDLFR--RMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATC 284
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
T+ + + +C ++ + + E+ + S + + ++ GFC R+EE
Sbjct: 285 CPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATK--SCLPDRITYTCLVRGFCNASRLEE 342
Query: 245 AFKVLDELRIRE-CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
A +L+ ++ PD + Y IV + E +++ VAP Y I
Sbjct: 343 ARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLI 402
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRV 362
GL R+ A E+ + +V+ + N++IG++ + D A M G
Sbjct: 403 DGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLE 462
Query: 363 PTLST------------------------------------------LSNLSKNLCKRNK 380
P + T S L + LCK +
Sbjct: 463 PGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKARE 522
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
D+ + V + L + + E +V L +GR EA +I + + GL
Sbjct: 523 IDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 202/469 (43%), Gaps = 45/469 (9%)
Query: 79 NFTHSPL-SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQK 137
N H L +Y++I+ + +I++ VL ++K + D Y +I SL
Sbjct: 120 NHGHPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDS 179
Query: 138 AFSVFNEV-KFNCEDIGPEICNSLLAVLAS--DGYIDNALKMFDEMSHRGVEFSTIGFGV 194
A N++ K NC+ P + + + A+ G ID A+K+ DEM ++ +
Sbjct: 180 ALEFKNQLLKENCK---PTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNS 236
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
I C + + ++ + + + +++ G + E ++++ ++
Sbjct: 237 IIRGMCREGYVDRAFQIISSISSK--GYAPDVITYNILLRGLLNQGKWEAGYELMSDMVA 294
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
R C+ + + Y ++ G V E +LK +K G+ P Y I L E R+
Sbjct: 295 RGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRV-- 352
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
AI + MI G VP + + +
Sbjct: 353 --------------------------------DLAIEVLDVMISDGCVPDIVNYNTILAC 380
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK+ ++DE + +++ L + SYN M S L ++G A G+I EM KG+DPD
Sbjct: 381 LCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPD 440
Query: 435 VSFYNSLMEACCREDLLRPAKKLW--DQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
YNSL+ CR+ ++ A +L +M +S C ++ +YNI++ +V + A+ +
Sbjct: 441 GITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEV 500
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
M++KG P+ TTYT L+EG+ L A ++ VN D + S
Sbjct: 501 LAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISEHS 549
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 204/473 (43%), Gaps = 21/473 (4%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQV-KVNKITLDSSVYR 123
+++ F + PN T+S HS ++L + + I+ L V K TLD
Sbjct: 4 TVSTDFLPLFNPHPNRTNS----HSNSRTLPILNETTNINRTLSSVSKPQTHTLD----- 54
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDI-----GPEI--CNSLLAVLASDGYIDNALKM 176
F L++ + FNE + + P++ C L+ L + ID A+++
Sbjct: 55 FKDTHLLKSLSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQV 114
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
+ + G I + I FC ++ +LD ++ + S V ++I
Sbjct: 115 MHILENHG-HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFS--PDIVTYNILIGSL 171
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
C ++ A + ++L CKP + Y I+ E L G + E +L + ++ + P
Sbjct: 172 CSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDM 231
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNF 355
Y I G+ E + A ++ I S + D N L+ G ++ + +
Sbjct: 232 FTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSD 291
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M+ +G + T S L ++C+ K +E V + K + D Y+ +++ LC GR
Sbjct: 292 MVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGR 351
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ A V+ M G PD+ YN+++ C++ A +++++ GCS N +YN
Sbjct: 352 VDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNS 411
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ S G AL + ML+KGV PD TY SL+ LC++ + A E+
Sbjct: 412 MFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELL 464
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 147/325 (45%), Gaps = 16/325 (4%)
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV---- 292
CK E+ L L + KPD + KL+ +F + + K + + +
Sbjct: 68 CKAGNFNESLYFLRHLVNKGHKPDVVLCT------KLIHGLFTSKTIDKAIQVMHILENH 121
Query: 293 -APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS---IDPRS 348
P Y I G RI A ++ + + + F+ D N LIGS+ S +D S
Sbjct: 122 GHPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLD--S 179
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F N ++++ PT+ T + L + + DE +++ + + DM +YN ++
Sbjct: 180 ALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIR 239
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
+C G + A+ +I + KG PDV YN L+ + +L M A GC
Sbjct: 240 GMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEA 299
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ TY++LIS G++E + L +M +KG+ PD Y L+ LC+E + A EV
Sbjct: 300 NVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVL 359
Query: 529 NKSVNHDVMLARSILSTFMISLCRR 553
+ ++ + +T + LC++
Sbjct: 360 DVMISDGCVPDIVNYNTILACLCKQ 384
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 160/364 (43%), Gaps = 77/364 (21%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
II GFC+ R++ A++VLD ++ + PD + Y I L+GS+ R ++
Sbjct: 132 IITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNI------LIGSLCSRGML-------- 177
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
+ EF L+ E C+ +V+ I+ +L I A+
Sbjct: 178 -----DSALEFKNQLLKEN--CKP-----TVVTYTILIEATLLQGGI--------DEAMK 217
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN------- 404
+ M+E P + T +++ + +C+ D ++ +S+ Y D+ +YN
Sbjct: 218 LLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLL 277
Query: 405 ----------------------------VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
V++S +C G++ E G++++MK+KGL PD
Sbjct: 278 NQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGY 337
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
Y+ L+ A C+E + A ++ D M + GC ++ YN +++ + + AL +F +
Sbjct: 338 CYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKL 397
Query: 497 LEKGVAPDATTYTSLLEGLCQETN----LQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
E G +P+A++Y S+ L + L E+ +K V+ D + S++S LCR
Sbjct: 398 GEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISC----LCR 453
Query: 553 RVLI 556
++
Sbjct: 454 DGMV 457
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 124/540 (22%), Positives = 232/540 (42%), Gaps = 35/540 (6%)
Query: 17 IISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQ 76
I+ +S+R + KW L Q L + L +++ + A+ FF WA
Sbjct: 38 IVESSSRLGFSMKWNGQLSQRLVGVIL---------------HMVKNGESAMVFFGWAGT 82
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+ +F H+ +Y+ ++L + Q + K+ ++ DS Y +I L +
Sbjct: 83 RQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLK 142
Query: 137 KAFSVFNEVKFNCEDIG--PEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
A S++ E+ D G P + C LL L G ++ AL+ F++MS + +
Sbjct: 143 LACSLYEEMV----DRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAAT---W 195
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
+ I ++ + +E++ ++ I + ++I+G K +V EA +VL E+
Sbjct: 196 TILIDGLFRAIRVDEACYYFEEMK---HTAIPNNWTYTVVINGLVKAGKVAEAERVLQEM 252
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
+ P Y V G + + +L+ ++ G Y I G + I
Sbjct: 253 PV----PTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEI 308
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI--VFFNFMIEKGRVPTLSTLSN 370
A EL E + S F D + LI + S + E P + + +
Sbjct: 309 DRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNT 368
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L K + ++ +++ + D+ +Y+ ++ LC +GR EA+ ++EM K
Sbjct: 369 LIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKK 428
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+ P V Y+S++ CR L A ++D M A+GC NL YN LI + G + A
Sbjct: 429 ILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAK 488
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
M E+G +PD TY +L+ GLC+ + A +++ +S+ + ++ + + + SL
Sbjct: 489 LRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASL 548
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/480 (19%), Positives = 207/480 (43%), Gaps = 8/480 (1%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ + L+Y++++ ++I+ +L+++K N D Y +I L + K
Sbjct: 284 KRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRL 343
Query: 136 QKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
+A + ++ N +D P + N+L+ + +++A ++F EM G + +
Sbjct: 344 SEARDLLGTLR-NEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYS 402
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
I C + + S L+E+ ++ ++ + +I G C+ ++ A V D +
Sbjct: 403 TLIRGLCNAGRASEAHSYLEEMVGKK--ILPKVPVYSSVISGLCRAGELDAASTVFDSMV 460
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
C+P+ Y + G + + ++ +K+ + G +P Y I+GL R
Sbjct: 461 ANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTD 520
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
EA +L + I + N +I S+ ++ ++ ++ G PT + + +
Sbjct: 521 EACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVL--RVVLATGNSPTAFFYATVIE 578
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
+LCK N E ++ + + D + + +V +C + A ++EM R G P
Sbjct: 579 SLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKP 638
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFA-SGCSGNLKTYNILISKFSEVGEIEGALRL 492
V Y++L+ A + A + ++ + + C + Y LI+ +S ++E A +
Sbjct: 639 SVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNV 698
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ K Y +LL+GL + NLQ +E+ + ++ ++ + + + CR
Sbjct: 699 LQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCR 758
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 149/343 (43%), Gaps = 20/343 (5%)
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
K +I S+ ++I G C +++ A + +E+ R +P + + + G+
Sbjct: 116 KWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGN 175
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA----KELGEVIVSGKFTIDDD 332
+ E+ L+ K+ P + I GL R+ EA +E+ + +T
Sbjct: 176 L---ELALRYFEKMSSIPCAATWTILIDGLFRAIRVDEACYYFEEMKHTAIPNNWTYTV- 231
Query: 333 VLNALI--GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
V+N L+ G V+ + ++++ VPTL+ +++ CK + + +
Sbjct: 232 VINGLVKAGKVAEAER---------VLQEMPVPTLANYTSVIGGHCKAGDMGKAYHLLED 282
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ Y D +YN ++ C + AY +++EMK PD+ Y+ L+ CR
Sbjct: 283 MKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKR 342
Query: 451 LRPAKKLWDQMF-ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
L A+ L + C+ N+ +YN LI FS+ + A +LF M+ G PD TY+
Sbjct: 343 LSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYS 402
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+L+ GLC A + V ++ + S+ + LCR
Sbjct: 403 TLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCR 445
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 111/543 (20%), Positives = 213/543 (39%), Gaps = 61/543 (11%)
Query: 40 QLGLRDSLSPSLVARVINPYLLT------------HHSLALGFFNWASQQPNFTHSPLSY 87
+L L SL +V R + P +LT + LAL +F S P ++
Sbjct: 140 KLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIP----CAATW 195
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
++ L + +++ +++K I ++ Y +I L++ +A V E+
Sbjct: 196 TILIDGLFRAIRVDEACYYFEEMKHTAIP-NNWTYTVVINGLVKAGKVAEAERVLQEMPV 254
Query: 148 NCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
P + N S++ G + A + ++M +G + + + I C ++
Sbjct: 255 ------PTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEI 308
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE-CKPDFIAY 264
+ +L+E++ N + ++I G C+ KR+ EA +L LR + C P+ ++Y
Sbjct: 309 DRAYELLEEMKS--NDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSY 366
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + F V + + + G P Y I GL R EA E +V
Sbjct: 367 NTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVG 426
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
K V +++I G + + +A F+ M+ G P L+ ++L LCK + +
Sbjct: 427 KKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCD 486
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGR---------------------------- 415
K ++ D +Y ++ LC R
Sbjct: 487 AKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIA 546
Query: 416 ----LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
L +A V++ + G P FY +++E+ C+E+ L A++L + M +G +
Sbjct: 547 SLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGS 606
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
T + L+ + A+ M+ G P TY++LL L + A V +
Sbjct: 607 TVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRL 666
Query: 532 VNH 534
++H
Sbjct: 667 ISH 669
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 187/398 (46%), Gaps = 14/398 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSH-RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
NS+LA LA + +++ M V + +G+ + C+ ++G L +LD +
Sbjct: 140 NSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMS 199
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL--RIRECKPDFIAYRIVAEEFKLM 274
+++ + V ++ G CK RV+EA +++ + C P+ + Y + + F +
Sbjct: 200 RQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRV 259
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA----KELGEVIVSGKFTID 330
G++ +++K GV + GL R A +E V GK +
Sbjct: 260 GNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKG--N 317
Query: 331 DDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
+ L+G++ + + A+ F+ + +G P + L + + ++ +
Sbjct: 318 AVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMAS 377
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+ + D ++YN++++ C RL EAY ++QEMK G+ PDV YN+L+ C+
Sbjct: 378 SMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAG 437
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
+L +M GC ++ T+ L+ + +VG+I+ ALR+ +M E G+ P+ Y
Sbjct: 438 DFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYN 497
Query: 510 SLLEGLCQETNLQAAFEVFN----KSVNHDVMLARSIL 543
+L++ LC+ ++ A E+F+ KSV +V ++L
Sbjct: 498 TLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALL 535
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 178/440 (40%), Gaps = 12/440 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVK-VNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
+++SIL +L+ R + + + ++ + D Y ++ L + A V +
Sbjct: 137 FAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLD 196
Query: 144 EVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEM--SHRGVEFSTIGFGVFIWKF 199
+ DI P++ N+++ L G + AL ++ S G +T+ + I F
Sbjct: 197 GMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAF 256
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRI--RE 256
C ++G + + V K EN + +++ + I+ G C+ R A + E R E
Sbjct: 257 C---RVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPE 313
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
K + + Y + +V + +K G +P Y I GL R+ +A
Sbjct: 314 GKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDAC 373
Query: 317 ELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ + F +D N LI G A M E G P + T + L
Sbjct: 374 SMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGS 433
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
CK + E+ + + + ++ +V C G++ EA +++ M G+ P+
Sbjct: 434 CKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNN 493
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YN+L++ C+ + A +L+D+M N+ T+N L+ + E A L
Sbjct: 494 VIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQ 553
Query: 496 MLEKGVAPDATTYTSLLEGL 515
M E+ PD T L+E L
Sbjct: 554 MREERCFPDYVTVDVLMEWL 573
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 208/464 (44%), Gaps = 17/464 (3%)
Query: 75 SQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN 134
QP+ T ++ ++++ L + +I + ++ + Y +I L + N
Sbjct: 135 GHQPDAT----TFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGN 190
Query: 135 TQKAFSVFNEV-KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
T A + + + NC+ P + ++L+ L D + A +F EM +G+ + +
Sbjct: 191 TSAAIRLLRSMEQGNCQ---PNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLD 250
+ I C+ + V ++++E+ +S I V + ++ CK V EA V+D
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMV---DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVD 304
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
+ R +P+ + Y + + L V V Y I G +
Sbjct: 305 MMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQ 364
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLS 369
+ +A L E + + T + N LI + + + AI F+ M+ +G++P L T
Sbjct: 365 SVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYR 424
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
LS LCK D+ + + K + +++ D++ Y ++ +C +G L +A + + K
Sbjct: 425 TLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSK 484
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
GL P+V YN ++ C++ LL A KL+ +M +GCS N TYN++ F E
Sbjct: 485 GLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRT 544
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNL-QAAFEVFNKSV 532
+ L ML +G + D +T T+LL G+ + L Q+ ++ K V
Sbjct: 545 IELLEEMLARGFSVDVST-TTLLVGMLSDDGLDQSVKQILCKIV 587
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 205/467 (43%), Gaps = 8/467 (1%)
Query: 67 ALGFFN-WASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
AL FN +QP S + ++ +L S++ ++ + + S+ +Q+ I D +
Sbjct: 54 ALSTFNRMLHKQP--PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIV 111
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
I SL AFS ++ +L+ L +G I AL +FD+M G
Sbjct: 112 INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 171
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEE 244
+ + + +G I C K+G + + +R E +V+ +I CK ++V E
Sbjct: 172 QPNVVTYGTLINGLC---KVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
AF + E+ + P+ + Y + + ++ + + P +
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVP 363
L E + EA ++ ++++ + NAL+ G + A+ F+ M+ K V
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ + + L CK D+ + +++ +S + + +YN ++ LC GRL++A +
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
EM +G PD+ Y +L + C+ L A L + S +++ Y ++
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
GE+E A LF N+ KG+ P+ TY ++ GLC++ L A ++F++
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSE 515
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 165/365 (45%), Gaps = 5/365 (1%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D AL F+ M H+ ST+ F + + +LS+ R+ ++ I V
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSL---SRQMDSFGIPPDVYT 107
Query: 230 V-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+ ++I+ C RV+ AF L ++ +PD + + + G + E + K
Sbjct: 108 LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 167
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPR 347
G P Y I GL A L + G + V + LI S+
Sbjct: 168 GEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVT 227
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A F+ MI KG P + T ++L LCK + + + + + D+ + N +V
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 287
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
LC G + EA+ V+ M +G++P+V YN+LM+ C + + A K++D M C
Sbjct: 288 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 347
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N+ +YN LI+ + ++ ++ A+ LF M + + P+ TY +L+ GLC LQ A +
Sbjct: 348 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 407
Query: 528 FNKSV 532
F++ V
Sbjct: 408 FHEMV 412
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 105/223 (47%), Gaps = 1/223 (0%)
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEK-GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N L+ S++ S ++ + ++ G P + TL+ + +LC N+ D +
Sbjct: 74 NRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILK 133
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ D ++ ++ LC G++ EA + +M +G P+V Y +L+ C+
Sbjct: 134 LGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSA 193
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A +L M C N+ ++ LI + ++ A +F M+ KG++P+ TY SL+
Sbjct: 194 AIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIH 253
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
GLC+ + + N+ V+ +M L+T + +LC+ ++
Sbjct: 254 GLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMV 296
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 99/204 (48%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ FN M+ K P+ + L ++ K L+ + + + + D+ + ++++
Sbjct: 54 ALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVIN 113
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC R+ A+ + ++ + G PD + + +L+ C E + A L+D+M G
Sbjct: 114 SLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQP 173
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ TY LI+ +VG A+RL +M + P+ +++L++ LC++ + AF +F
Sbjct: 174 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIF 233
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
++ + + ++ + LC+
Sbjct: 234 SEMITKGISPNIVTYNSLIHGLCK 257
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 95/187 (50%), Gaps = 6/187 (3%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
+++ G P +T + L + LC K E + ++ + + ++ +Y +++ LC G
Sbjct: 131 ILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGN 190
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
A +++ M++ P+V +++L+++ C++ + A ++ +M G S N+ TYN
Sbjct: 191 TSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNS 250
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI ++ E + L + M++ + PD T ++++ LC+E + A +V D
Sbjct: 251 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVV------D 304
Query: 536 VMLARSI 542
+M+ R +
Sbjct: 305 MMIHRGV 311
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 58/137 (42%)
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L EA M K P +N L+ + + L QM + G ++ T I
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
+I+ + ++ A +L+ G PDATT+T+L+ GLC E + A +F+K +
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 536 VMLARSILSTFMISLCR 552
T + LC+
Sbjct: 171 FQPNVVTYGTLINGLCK 187
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 181/397 (45%), Gaps = 7/397 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ +A D + + ++M G+ + + + I FC +++ L++L ++ K
Sbjct: 14 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 73
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E S++ S + ++G+C GKR+ +A ++D++ +PD I + + L
Sbjct: 74 LGYEPSIVTLSSL----LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E ++ + + G P Y + GL I A L + + K D + N
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 336 ALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I S+ A+ F M KG P + T S+L LC + + ++ +
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ ++N ++ G+ EA + +M ++ +DPD+ YNSL+ C D L A
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K++++ M + C +L TYN LI F + +E LF M +G+ D TYT+L++G
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
L + + A +VF + V+ V S + LC
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 165/362 (45%), Gaps = 9/362 (2%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-L 231
A+ + D M RG + + + +GV + C+ + ++L+ K E + I V+
Sbjct: 134 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN---KMEAAKIEADVVIFNT 190
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
II CK + V++A + E+ + +P+ + Y + G + +L +
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSSIDP-RS 348
+ P + I + E + EA++L + ++ K +ID D+ N+LI D
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMI--KRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A F FM+ K P L T + L K CK + ++ E+++ +S D +Y ++
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L G A V ++M G+ PD+ Y+ L++ C L A +++D M S
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ Y +I + G+++ LF ++ KGV P+ TY +++ GLC + LQ A+ +
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 529 NK 530
K
Sbjct: 489 KK 490
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 161/368 (43%), Gaps = 9/368 (2%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK---REN 220
L G ID A + ++M +E + F I C+ + L++ E+ R N
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
+ S+I+ L +G R +A ++L ++ ++ P+ + + + + F G E
Sbjct: 220 VVTYSSLISCLCSYG-----RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-G 339
E + K + P Y I G + R+ +AK++ E +VS D D N LI G
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
S F M +G V T + L + L D +V+K + ++ D
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ +Y++++ LC +G+L +A V M++ + D+ Y +++E C+ + L+
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+ G N+ TYN +IS ++ A L M E G PD+ TY +L+ ++
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Query: 520 NLQAAFEV 527
+ A+ E+
Sbjct: 515 DKAASAEL 522
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 111/506 (21%), Positives = 213/506 (42%), Gaps = 66/506 (13%)
Query: 42 GLRDSLSPSLVARVIN----PYLLTHHSLALGFF--NWASQ-------------QPNFTH 82
G R S + +LV +++ P +T +L G F N AS+ QPN
Sbjct: 93 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL-- 150
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
++Y ++ L I+ ++L +++ KI D ++ II SL + ++ A ++F
Sbjct: 151 --VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E++ + I P + +SL++ L S G +A ++ +M + + + + F I F
Sbjct: 209 KEME--TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 266
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ K + + D++ KR I+ + +I+GFC R+++A ++ + + ++C P
Sbjct: 267 KEGKFVEAEKLHDDMIKRS---IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 323
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D Y + + F V + + ++ G+ T Y I GL +
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG--------- 374
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
D +A F M+ G P + T S L LC
Sbjct: 375 -------------------------DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K ++ +EV+ + ++ D+ Y M+ +C +G++ + + + + KG+ P+V YN
Sbjct: 410 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 469
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+++ C + LL+ A L +M G + TYN LI G+ + L M
Sbjct: 470 TMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 529
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAF 525
DA+T L+ + + L +F
Sbjct: 530 RFVGDAST-IGLVANMLHDGRLDKSF 554
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 120/271 (44%), Gaps = 1/271 (0%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+L K KLG P + G +RI +A L + +V + D LI +
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 343 SIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ S A+ + M+++G P L T + LCKR D + + A D+
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+N ++ LC + +A + +EM+ KG+ P+V Y+SL+ C A +L M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ NL T+N LI F + G+ A +L +M+++ + PD TY SL+ G C L
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A ++F V+ D +T + C+
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 92/197 (46%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M++ +P++ + L + K K D ++ + + + ++ +YN++++ C +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ A ++ +M + G +P + +SL+ C + A L DQM G + T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI + A+ L M+++G P+ TY ++ GLC+ ++ AF + NK
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 536 VMLARSILSTFMISLCR 552
+ I +T + SLC+
Sbjct: 181 IEADVVIFNTIIDSLCK 197
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 184/412 (44%), Gaps = 19/412 (4%)
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
F C P N+++ L Y D A K++ M GV + + FC A+
Sbjct: 82 FACPPAAPAY-NAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPH 140
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
L +L + R G+V ++ G +A ++ D++ P+ A+
Sbjct: 141 IALRLLRALPHR------GAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNK 194
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI--VS 324
V G V E ++L K + G++ Y +I GL CEA L E + V
Sbjct: 195 VLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL------CEAGRLPEAVRLVD 248
Query: 325 G--KFTIDDDV-LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
G + + D V N LI G P+ A+ + M+ +G +P T + + CK +
Sbjct: 249 GMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM 308
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
E E+ K + D +Y +++ LC G + A + E + KG+ PD+ YNS
Sbjct: 309 VQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNS 368
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L++ C + L+ A ++ ++M GC +++TYNI+I+ ++G I A + ++ + KG
Sbjct: 369 LVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG 428
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
PD T+ +L++G C+ L +A ++ + + + ++ + LC+
Sbjct: 429 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 480
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 178/412 (43%), Gaps = 8/412 (1%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDE 179
Y ++ L +T A +F+++ + P + N +L L G + A + +
Sbjct: 157 YCTVVCGLYAHGHTHDARQLFDQMLHT--HVFPNLAAFNKVLHALCKRGDVLEAGLLLGK 214
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
+ RG+ + + ++I CE +L + + ++D +R + V +I G CK
Sbjct: 215 VIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA---VPDVVTYNTLIRGLCKK 271
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+EA L + + C PD Y + + + + V E +LK G P Y
Sbjct: 272 SMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTY 331
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIE 358
I GL E + A EL + D V N+L+ G A+ N M E
Sbjct: 332 CSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE 391
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
+G P + T + + LCK + V Y D+ ++N ++ C +L
Sbjct: 392 EGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDS 451
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A +++ M G+ PD YNS++ C+ + + + +M GC N TYNILI
Sbjct: 452 ALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIE 511
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
F ++E A ++ M ++G+ PDA ++ +L+ G C+ +L+ A+ +F K
Sbjct: 512 NFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 563
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 175/402 (43%), Gaps = 15/402 (3%)
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
+P ++ + +A++V + V +N +L+ L A+ M ++G
Sbjct: 240 LPEAVRLVDGMRAYAVPDVVTYN----------TLIRGLCKKSMPQEAMHYLRRMMNQGC 289
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSML-DEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
+ I +C+ + + + +L D V K + V +I+G C VE
Sbjct: 290 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFK---GFVPDQVTYCSLINGLCAEGDVER 346
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A ++ +E + + KPD + Y + + L G + V+ + + G P Y I
Sbjct: 347 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 406
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVP 363
GL I +A + + + D N LI G + SA+ M E G P
Sbjct: 407 GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAP 466
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
T +++ LCK K +E+ E ++ + + +YN+++ C S ++ EA VI
Sbjct: 467 DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 526
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+M ++GL PD +N+L+ CR L A L+ ++ G S T+N LI FS
Sbjct: 527 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 586
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+ A ++F ML KG D+ TY L++G C+ N+ A+
Sbjct: 587 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAY 628
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 188/465 (40%), Gaps = 63/465 (13%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+++++ L L+++ D Y II + Q+A + +
Sbjct: 259 VTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKD 318
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
F SL+ L ++G ++ AL++F+E +G++ + +
Sbjct: 319 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVY------------ 366
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
NS++ G + LI+H A +V++E+ C PD Y
Sbjct: 367 ---------------NSLVKGLCLQGLILH----------ALQVMNEMAEEGCHPDIQTY 401
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
IV MG++ + VV+ G P + I G ++ A +L E +
Sbjct: 402 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 461
Query: 325 GKFTID----DDVLNALI--GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
D + VLN L G V+ ++ F MI KG P T + L +N C+
Sbjct: 462 YGIAPDTITYNSVLNGLCKAGKVNEVNET-----FQEMILKGCHPNPITYNILIENFCRS 516
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
NK +E +V +S D S+N ++ C +G L AY + Q+++ KG +
Sbjct: 517 NKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTF 576
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
N+L+ A + + A+K++D+M + G + TY +LI + ++ A M++
Sbjct: 577 NTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIK 636
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
KG P +T+ ++ L +VNH V A I+
Sbjct: 637 KGFIPSMSTFGRVINSL---------------TVNHRVFQAVGII 666
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 141/328 (42%), Gaps = 12/328 (3%)
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I + + R+ +A + + + C P AY + + + V + GV
Sbjct: 60 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 119
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVF 352
+P + + + + R A L + V+ L + D R
Sbjct: 120 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ---L 176
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F+ M+ P L+ + + LCKR E + + ++ +YN+ + LC
Sbjct: 177 FDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCE 236
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
+GRL EA ++ M+ + PDV YN+L+ C++ + + A +M GC + T
Sbjct: 237 AGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 295
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN--- 529
YN +I + ++ ++ A L + + KG PD TY SL+ GLC E +++ A E+FN
Sbjct: 296 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 355
Query: 530 -KSVNHDVMLARSILSTFMISLCRRVLI 556
K + D+++ S++ LC + LI
Sbjct: 356 AKGIKPDIVVYNSLVK----GLCLQGLI 379
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 155/393 (39%), Gaps = 50/393 (12%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y++I+ + +LK D Y +I L + ++A +FNE
Sbjct: 294 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 353
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVE------------FSTI 190
+ + I P+I NSL+ L G I +AL++ +EM+ G +
Sbjct: 354 AQ--AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKM 411
Query: 191 G-----------------------FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G F I +C+ KL L +++ R E + ++
Sbjct: 412 GNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVE--RMWEYGIAPDTI 469
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+++G CK +V E + E+ ++ C P+ I Y I+ E F + E V+ K
Sbjct: 470 TYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM 529
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS-IDP 346
+ G+ P + I G + A L + + ++ D N LIG+ S ++
Sbjct: 530 SQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNM 589
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD----ELVEVYKVLSANDYFTDMES 402
A F+ M+ KG T L CK D LVE+ K + M +
Sbjct: 590 HMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIK----KGFIPSMST 645
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
+ +++ L + R+ +A G+I M + G+ P+V
Sbjct: 646 FGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 678
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 91/216 (42%), Gaps = 6/216 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+S+L L + ++N ++ +++ + + Y +I + + ++A V
Sbjct: 469 ITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI-- 526
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
VK + E + P+ N+L+ +G ++ A +F ++ +G + F I F
Sbjct: 527 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 586
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+ + DE+ + + S ++I G CK V+ A+ L E+ + P
Sbjct: 587 LNMHMAEKIFDEMLSKGHRA--DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMS 644
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+ V + VF+ ++ K+GV P D
Sbjct: 645 TFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVD 680
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 150/584 (25%), Positives = 239/584 (40%), Gaps = 94/584 (16%)
Query: 60 LLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLS-LSRQINAIDSVL---KQVKVNKI 115
LL + AL FFNW SPL ++ SR+ N+ + +L K K +KI
Sbjct: 96 LLGSTAKALKFFNWVQANSPCQDSPLLSFTLEAVFEHASREPNSHNKLLDLFKTSKSHKI 155
Query: 116 TLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG-PEICNSLLAVLASDGYIDNAL 174
L + +I + + ++F V+NE+ C I N L+ VL G +D+AL
Sbjct: 156 PLSVNAATLLIRCFGRAQMVDESFLVYNEL---CPSRRLTHIRNILIDVLFRKGRVDDAL 212
Query: 175 KMFDEMSHRGVEF---STIGFGVF----------------------------------IW 197
+ DEM EF S G VF IW
Sbjct: 213 HLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIW 272
Query: 198 ------KFCENA-------------KLGQV---------LSMLDEVR--KRENSMI---- 223
+ C + KLG V L+ L R KR N+++
Sbjct: 273 LTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMK 332
Query: 224 ------NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE-----CKPDFIAYRIVAEEFK 272
N +LI H CK +RV+EA +V +++ E +PD I Y + +
Sbjct: 333 EMDIQPNVVTFGILINH-LCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLC 391
Query: 273 LMGSVFEREVVLKKKR-KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
+G E ++++ R + P T Y I G I A+EL + + +
Sbjct: 392 KVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNV 451
Query: 332 DVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
LN L+ G A+ FFN M KG T + L + C N ++ +E++
Sbjct: 452 VTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDE 511
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ D Y ++S L +G+L A V+ +MK G PD+ +N L+ CR++
Sbjct: 512 MLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNK 571
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
L A ++ +M +G + TYN LIS FS+ G+ A RL M+++G+ P TY +
Sbjct: 572 LDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGA 631
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI-SLCRR 553
L+ C NL A ++F + + +++ +I SLCR+
Sbjct: 632 LIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRK 675
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 195/451 (43%), Gaps = 33/451 (7%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
S +++L +L +R+ ++++L ++K I + + +I L + + +A VF ++
Sbjct: 307 SCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKM 366
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
G E S+G++ VE I + I C+ +
Sbjct: 367 N------GGE----------SNGFL--------------VEPDVITYNTLIDGLCKVGRQ 396
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ L +++ +R + M N +V +I G+CK +E A ++ D++ P+ +
Sbjct: 397 EEGLGLVERMRSQPRCMPN-TVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLN 455
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + G + + + G+ Y I I +A EL + ++
Sbjct: 456 TLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEA 515
Query: 326 KFTIDDDVLNALIGSVSSIDPRSAIVF-FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ D V LI +S F + M E G P + + + L C++NK DE
Sbjct: 516 GCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEA 575
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
E+ K + D +YN ++S +G A+ ++++M ++GL P V Y +L+ A
Sbjct: 576 YEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHA 635
Query: 445 CCREDLLRPAKKLWDQMFA-SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C L A K++ M + S N YNILI+ +++ AL L +M KGV P
Sbjct: 636 YCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKP 695
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
+ T+ ++ +GL ++ L AFE+ ++ H
Sbjct: 696 NTNTFNAMFKGLQEKNWLSKAFELMDRMTEH 726
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 151/326 (46%), Gaps = 9/326 (2%)
Query: 167 DGY-----IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
DGY I+ A ++FD+M+ GV + + + C++ ++ + +E++ +
Sbjct: 424 DGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGK--G 481
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
+ +V +I FC +E+A ++ DE+ C PD I Y + G +
Sbjct: 482 LKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRAS 541
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
VL K ++ G +P + I G + ++ EA E+ + + + D N LI
Sbjct: 542 FVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHF 601
Query: 342 SSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT-D 399
S D +A M+++G VPT+ T L C DE +++++ +S+ +
Sbjct: 602 SKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPN 661
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
YN++++ LC ++ A ++ +MK KG+ P+ + +N++ + ++ L A +L D
Sbjct: 662 TVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMD 721
Query: 460 QMFASGCSGNLKTYNILISKFSEVGE 485
+M C+ + T IL S VGE
Sbjct: 722 RMTEHACNPDYITMEILTEWLSAVGE 747
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 212/486 (43%), Gaps = 27/486 (5%)
Query: 57 NPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSL---SLSRQINAI---------- 103
NPY L SL L FF++ S P F+H+ SY S++ L +++Q ++
Sbjct: 84 NPYFLPPKSL-LSFFDFLSSYPTFSHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGK 142
Query: 104 ---DSVLKQVKVNKITLDSS-VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS 159
SV + K TL SS V+ ++ + A F K + I C
Sbjct: 143 GSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKC 202
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL + AL+ + E+ G + F V + + C+ K+ + DE+RK
Sbjct: 203 LLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRK-- 260
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFK---VLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+ +V +I+G+CK +EE F+ V++E R+ PD Y + +
Sbjct: 261 TGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVF---PDVFTYSALIDGLCKECQ 317
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ + + K+ G+ P + I G R+ A E+ + + + D + N
Sbjct: 318 LEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNT 377
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G R A F M ++G +P T + L CK + +E+ K +
Sbjct: 378 LIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEG 437
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D ++ ++S LC G++ +A ++EM R GL PD Y +M+ C++ ++
Sbjct: 438 IQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGF 497
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
KL +M + G + TYN+L++ + G+++ A L + ML GV PD TY LL+G
Sbjct: 498 KLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGH 557
Query: 516 CQETNL 521
C+ L
Sbjct: 558 CKHGKL 563
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+ A + F+ + + G PT + + L CK +E + V+ F D+ +Y+ +
Sbjct: 249 KDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSAL 308
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC +L +A + +EM +GL P+ + +L+ C+ + A +++ QMF G
Sbjct: 309 IDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGL 368
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+L YN LI + G A + M ++G+ PD TYT+LL+G C+E +L+ A E
Sbjct: 369 KADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALE 428
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+ + V + L + + LCR
Sbjct: 429 MRKEMVKEGIQLDNVAFTAIISGLCR 454
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 97/207 (46%)
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
P A+ F+ +++ G P + T + L LCK K + ++ + S+N
Sbjct: 213 PMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNT 272
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+++ C SG L E + + M+ + PDV Y++L++ C+E L A L+ +M G
Sbjct: 273 LINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRG 332
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
N T+ LI+ + G ++ AL ++ M KG+ D Y +L++GLC+ + A
Sbjct: 333 LVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREAR 392
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCR 552
+ + ++ + +T + C+
Sbjct: 393 KFVGEMTKRGLIPDKFTYTTLLDGSCK 419
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 131/534 (24%), Positives = 225/534 (42%), Gaps = 53/534 (9%)
Query: 60 LLTHHSLALGFFNWAS----QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKI 115
L++ L LGF + + + F + Y +I+ +L + A + + ++
Sbjct: 167 LMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGF 226
Query: 116 TLDSSVYRFIIPSLIQGKNTQKAFSVF-----------NEVKFN------CE-------- 150
LDS + ++ +G N + A VF N V ++ CE
Sbjct: 227 VLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAF 286
Query: 151 ----DIGPEICNS-------LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+G + C L+ L G ID A +FDEM RG + + + V I
Sbjct: 287 GLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGL 346
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECK 258
C + K+ + + RK I SVI +I+G+CK RV AF++L + R CK
Sbjct: 347 CRDGKIEEANGV---CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACK 403
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
P+ + + E +G ++ +LK+ G++P Y I GL E + A +L
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Query: 319 GEVIVSGKFTIDDDVLN--ALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+ F I+ D L A+I + D SA F M+ KG T + L
Sbjct: 464 LSSM--NCFDIEPDCLTFTAIINAFCKQGKADVASA--FLGLMLRKGISLDEVTGTTLID 519
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
+CK K+ + + + + L T S NV++ L +++E ++ ++ + GL P
Sbjct: 520 GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVP 579
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
V Y +L++ R + + ++ + M SGC N+ Y I+I+ + G +E A +L
Sbjct: 580 SVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL 639
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
M + GV+P+ TYT +++G L A E V L I S+ +
Sbjct: 640 SAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 117/511 (22%), Positives = 215/511 (42%), Gaps = 62/511 (12%)
Query: 31 TPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSI 90
TP E+ L ++P++ ++VI+ + + + + FF W + ++ P + +
Sbjct: 51 TPNWEKNSSLKSLVSHMNPNVASQVIS-LQRSDNDICVRFFMWVCKHSSYCFDPTQKNQL 109
Query: 91 LK---SLSLSRQINA-IDSVLKQV------------------KVNKITLDSSVYRFIIPS 128
LK S L R +A I +++K+ +V L+ Y ++ S
Sbjct: 110 LKLIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMS 169
Query: 129 LIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG-VEF 187
L + A+ + ++ + +G +++ L +GY + A ++ G V
Sbjct: 170 LAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLD 229
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
S IG + + FC L L + D V +E + SV ++IHG C+ R+EEAF
Sbjct: 230 SHIGTSLLLG-FCRGLNLRDALKVFD-VMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFG 287
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
+ D++ + C+P Y ++ + G + + + + G P + Y I GL
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLC 347
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRV-PTLS 366
+ +I EA + +V + NALI N + GRV P
Sbjct: 348 RDGKIEEANGVCRKMVKDRIFPSVITYNALI---------------NGYCKDGRVVPAFE 392
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
L+ + K CK N + ++N ++ LC G+ +A +++ M
Sbjct: 393 LLTVMEKRACKPN--------------------VRTFNELMEGLCRVGKPYKAVHLLKRM 432
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
GL PD+ YN L++ CRE + A KL M + T+ +I+ F + G+
Sbjct: 433 LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ A ML KG++ D T T+L++G+C+
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCK 523
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 125/538 (23%), Positives = 212/538 (39%), Gaps = 58/538 (10%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQIN-AIDSVLKQVKVNKITLDSSVYRFII 126
L F +++ P PL H++ L LS + A+ L + + SS + ++
Sbjct: 85 LRLFLFSALSPRLRSRPLHAHAVSLLLRLSSHADEAMFDALADARAAGLPASSSAFAALV 144
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVE 186
+ A F+ + + N++L L G I AL +++ M G
Sbjct: 145 AAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCA 204
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
+ + V + C+ G L M DE+ R M N + VL+ C +++EA
Sbjct: 205 PNRATYNVLMDGLCKQGMAGDALKMFDEMLDR-GIMPNVKIYTVLL-SSLCNAGKIDEAV 262
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSV---FEREVVLKKKRKLGVAPRTNDYREFI 303
++L ++ + C PD + Y +G V F+R V+L+ G A Y I
Sbjct: 263 QLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDG---GFALGLKGYSCLI 319
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRV 362
GL RR E + ++ + D + +I G + A+ F + M +KG V
Sbjct: 320 DGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFV 379
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + + K LC + + + N+ D + +M+ LC G + EA +
Sbjct: 380 PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQI 439
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM--------------------- 461
EM G DP V YN+L++ RE L A+ L+ +M
Sbjct: 440 FDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRD 499
Query: 462 ---------------------------FASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
SG ++ TYN LI+ + ++GA+RLF
Sbjct: 500 SESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFK 559
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ KG++PD TY +L++GL + A +F + + SI ++ M SLCR
Sbjct: 560 ELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCR 617
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 105/473 (22%), Positives = 193/473 (40%), Gaps = 24/473 (5%)
Query: 75 SQQPNFTHSPLS--YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQG 132
S+ F P + Y++ILK+L S I ++ ++ + + Y ++ L +
Sbjct: 161 SRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQ 220
Query: 133 KNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
A +F+E+ +I LL+ L + G ID A+++ M +G + +
Sbjct: 221 GMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTY 280
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
F+ C+ ++ + L V ++ G +I G + +R +E F +
Sbjct: 281 NAFLSGLCKVGRVNEAFQRL--VMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTM 338
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
R PD + Y I+ G + + L +K G P T Y + L +
Sbjct: 339 LERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDL 398
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVSS---IDPRSAIVFFNFMIEKGRVPTLSTLS 369
A L ++ +D +I + +D A+ F+ M E G PT+ T +
Sbjct: 399 ERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVD--EAMQIFDEMGEHGCDPTVMTYN 456
Query: 370 NLSKNLCKRNKSDELVEVYK--------------VLSANDYFTDMESYNVMVSFLCTSGR 415
L + + +E ++ L AN D ES +V +C SG+
Sbjct: 457 ALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQ-VRDSESLRKLVHDMCQSGQ 515
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ +AY +++ + G+ PDV YN+L+ C+ L A +L+ ++ G S + TY
Sbjct: 516 VLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
LI A+ LF N+L+ G +P + Y S++ LC+ L A ++
Sbjct: 576 LIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 110/509 (21%), Positives = 198/509 (38%), Gaps = 71/509 (13%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++ L L ++N L ++ L Y +I L Q + + F +
Sbjct: 278 VTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKT 337
Query: 145 VKFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ +I P++ + + A G I++AL D M +G T + + C++
Sbjct: 338 MLE--RNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDH 395
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L + ++ E+ +N+++ S ++I G CK V+EA ++ DE+ C P +
Sbjct: 396 GDLERAHTLRSEML--QNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVM 453
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + F G + E +L K ++G P + LG R
Sbjct: 454 TYNALIDGFYREGRL-EEARMLFHKMEMGNNPSL--FLRLTLGANQVR------------ 498
Query: 323 VSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
D + L L+ + S A +I+ G VP + T + L LCK
Sbjct: 499 -------DSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNL 551
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
D V ++K L D +Y ++ L + R +A + Q + + G P +S YNS+
Sbjct: 552 DGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSM 611
Query: 442 MEACCREDLLRPAKKLW---------------------------------------DQMF 462
M + CR L A LW DQ +
Sbjct: 612 MRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEY 671
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
S S Y I + +V + ALR+FH + E G+ L+ LC + NL
Sbjct: 672 GSISS---NPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLN 728
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLC 551
AA ++ +++ ++L++ + + + LC
Sbjct: 729 AAVDIMLYALSKSIILSQPVGNRLLRWLC 757
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 110/243 (45%), Gaps = 35/243 (14%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ +N M+ G P +T + L LCK+ + + ++++ + +++ Y V++S
Sbjct: 191 ALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLS 250
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK----LWDQMFAS 464
LC +G++ EA ++ MK KG PD YN+ + C+ + A + L D FA
Sbjct: 251 SLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFAL 310
Query: 465 GCSG-------------------------------NLKTYNILISKFSEVGEIEGALRLF 493
G G ++ Y I+I +E G IE AL
Sbjct: 311 GLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFL 370
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
M +KG PD Y ++L+ LC +L+ A + ++ + ++++L + + + LC+R
Sbjct: 371 DVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKR 430
Query: 554 VLI 556
L+
Sbjct: 431 GLV 433
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/421 (19%), Positives = 163/421 (38%), Gaps = 57/421 (13%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL F + ++ F Y+++LK L + ++ ++ N + LDS+ +I
Sbjct: 366 ALSFLD-VMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMI 424
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFD--EMSHRG 184
L + +A +F+E+ + D N+L+ +G ++ A +F EM +
Sbjct: 425 CGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNP 484
Query: 185 VEFSTIGFGV-----------FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LI 232
F + G + C++ GQVL +R +S + V+ +
Sbjct: 485 SLFLRLTLGANQVRDSESLRKLVHDMCQS---GQVLKAYKLLRSIIDSGVVPDVVTYNTL 541
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I+G CK + ++ A ++ EL+++ PD I Y + + + ++ + + G
Sbjct: 542 INGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGS 601
Query: 293 APRTNDYREFILGLIVERRICEAKEL--------------GEVIVSGKFTIDDDVLNALI 338
+P + Y + L +++ +A L EV+ + I+D L+ +
Sbjct: 602 SPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGV 661
Query: 339 ----------GSVSSIDPRS--------------AIVFFNFMIEKGRVPTLSTLSNLSKN 374
GS+SS +P + A+ F+ + E G T + + L
Sbjct: 662 RELIKIDQEYGSISS-NPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINY 720
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LC + V++ + N ++ +LC R ++A + M G D D
Sbjct: 721 LCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQALAWRMHLVGYDMD 780
Query: 435 V 435
V
Sbjct: 781 V 781
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 184/412 (44%), Gaps = 19/412 (4%)
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
F C P N+++ L Y D A K++ M GV + + FC A+
Sbjct: 79 FACPPAAPAY-NAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPH 137
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
L +L + R G+V ++ G +A ++ D++ P+ A+
Sbjct: 138 IALRLLRALPHR------GAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNK 191
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI--VS 324
V G V E ++L K + G++ Y +I GL CEA L E + V
Sbjct: 192 VLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL------CEAGRLPEAVRLVD 245
Query: 325 G--KFTIDDDV-LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
G + + D V N LI G P+ A+ + M+ +G +P T + + CK +
Sbjct: 246 GMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM 305
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
E E+ K + D +Y +++ LC G + A + E + KG+ PD+ YNS
Sbjct: 306 VQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNS 365
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L++ C + L+ A ++ ++M GC +++TYNI+I+ ++G I A + ++ + KG
Sbjct: 366 LVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG 425
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
PD T+ +L++G C+ L +A ++ + + + ++ + LC+
Sbjct: 426 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 477
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 178/413 (43%), Gaps = 8/413 (1%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFD 178
Y ++ L +T A +F+++ + P + N +L L G + A +
Sbjct: 153 AYCTVVCGLYAHGHTHDARQLFDQMLHT--HVFPNLAAFNKVLHALCKRGDVLEAGLLLG 210
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
++ RG+ + + ++I CE +L + + ++D +R + V +I G CK
Sbjct: 211 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA---VPDVVTYNTLIRGLCK 267
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+EA L + + C PD Y + + + + V E +LK G P
Sbjct: 268 KSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVT 327
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMI 357
Y I GL E + A EL + D V N+L+ G A+ N M
Sbjct: 328 YCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMA 387
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
E+G P + T + + LCK + V Y D+ ++N ++ C +L
Sbjct: 388 EEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLD 447
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
A +++ M G+ PD YNS++ C+ + + + +M GC N TYNILI
Sbjct: 448 SALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 507
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
F ++E A ++ M ++G+ PDA ++ +L+ G C+ +L+ A+ +F K
Sbjct: 508 ENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 560
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 175/402 (43%), Gaps = 15/402 (3%)
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
+P ++ + +A++V + V +N +L+ L A+ M ++G
Sbjct: 237 LPEAVRLVDGMRAYAVPDVVTYN----------TLIRGLCKKSMPQEAMHYLRRMMNQGC 286
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSML-DEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
+ I +C+ + + + +L D V K + V +I+G C VE
Sbjct: 287 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFK---GFVPDQVTYCSLINGLCAEGDVER 343
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A ++ +E + + KPD + Y + + L G + V+ + + G P Y I
Sbjct: 344 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 403
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVP 363
GL I +A + + + D N LI G + SA+ M E G P
Sbjct: 404 GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAP 463
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
T +++ LCK K +E+ E ++ + + +YN+++ C S ++ EA VI
Sbjct: 464 DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 523
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+M ++GL PD +N+L+ CR L A L+ ++ G S T+N LI FS
Sbjct: 524 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 583
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+ A ++F ML KG D+ TY L++G C+ N+ A+
Sbjct: 584 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAY 625
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 164/396 (41%), Gaps = 49/396 (12%)
Query: 167 DGY-----IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE-- 219
DGY + A ++ + +G + + I C + + L + +E + +
Sbjct: 298 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 357
Query: 220 ------NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
NS++ G + LI+H A +V++E+ C PD Y IV
Sbjct: 358 PDIVVYNSLVKGLCLQGLILH----------ALQVMNEMAEEGCHPDIQTYNIVINGLCK 407
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID--- 330
MG++ + VV+ G P + I G ++ A +L E + D
Sbjct: 408 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 467
Query: 331 -DDVLNALI--GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
+ VLN L G V+ ++ F MI KG P T + L +N C+ NK +E +V
Sbjct: 468 YNSVLNGLCKAGKVNEVNET-----FQEMILKGCHPNPITYNILIENFCRSNKMEEASKV 522
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
+S D S+N ++ C +G L AY + Q+++ KG +N+L+ A
Sbjct: 523 IVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSG 582
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+ + A+K++D+M + G + TY +LI + ++ A M++KG P +T
Sbjct: 583 KLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMST 642
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
+ ++ L +VNH V A I+
Sbjct: 643 FGRVINSL---------------TVNHRVFQAVGII 663
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 140/327 (42%), Gaps = 4/327 (1%)
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
V I + + R+ +A + + + C P AY + + + V +
Sbjct: 54 VASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLA 113
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSA 349
GV+P + + + + R A L + V+ L + D R
Sbjct: 114 AGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ- 172
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F+ M+ P L+ + + LCKR E + + ++ +YN+ +
Sbjct: 173 --LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRG 230
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC +GRL EA ++ M+ + PDV YN+L+ C++ + + A +M GC +
Sbjct: 231 LCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 289
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
TYN +I + ++ ++ A L + + KG PD TY SL+ GLC E +++ A E+FN
Sbjct: 290 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 349
Query: 530 KSVNHDVMLARSILSTFMISLCRRVLI 556
++ + + ++ + LC + LI
Sbjct: 350 EAQAKGIKPDIVVYNSLVKGLCLQGLI 376
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 157/393 (39%), Gaps = 50/393 (12%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y++I+ + +LK D Y +I L + ++A +FNE
Sbjct: 291 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 350
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRG------------------ 184
+ + I P+I NSL+ L G I +AL++ +EM+ G
Sbjct: 351 AQ--AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKM 408
Query: 185 --VEFSTI---------------GFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
+ +T+ F I +C+ KL L +++ R E + ++
Sbjct: 409 GNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVE--RMWEYGIAPDTI 466
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+++G CK +V E + E+ ++ C P+ I Y I+ E F + E V+ K
Sbjct: 467 TYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM 526
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS-IDP 346
+ G+ P + I G + A L + + ++ D N LIG+ S ++
Sbjct: 527 SQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNM 586
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD----ELVEVYKVLSANDYFTDMES 402
A F+ M+ KG T L CK D LVE+ K + M +
Sbjct: 587 HMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIK----KGFIPSMST 642
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
+ +++ L + R+ +A G+I M + G+ P+V
Sbjct: 643 FGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 675
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 91/216 (42%), Gaps = 6/216 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+S+L L + ++N ++ +++ + + Y +I + + ++A V
Sbjct: 466 ITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI-- 523
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
VK + E + P+ N+L+ +G ++ A +F ++ +G + F I F
Sbjct: 524 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 583
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+ + DE+ + + S ++I G CK V+ A+ L E+ + P
Sbjct: 584 LNMHMAEKIFDEMLSKGHRA--DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMS 641
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+ V + VF+ ++ K+GV P D
Sbjct: 642 TFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVD 677
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 184/412 (44%), Gaps = 19/412 (4%)
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
F C P N+++ L Y D A K++ M GV + + FC A+
Sbjct: 80 FACPPAAPAY-NAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPH 138
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
L +L + R G+V ++ G +A ++ D++ P+ A+
Sbjct: 139 IALRLLRALPHR------GAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNK 192
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI--VS 324
V G V E ++L K + G++ Y +I GL CEA L E + V
Sbjct: 193 VLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL------CEAGRLPEAVRLVD 246
Query: 325 G--KFTIDDDV-LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
G + + D V N LI G P+ A+ + M+ +G +P T + + CK +
Sbjct: 247 GMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM 306
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
E E+ K + D +Y +++ LC G + A + E + KG+ PD+ YNS
Sbjct: 307 VQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNS 366
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L++ C + L+ A ++ ++M GC +++TYNI+I+ ++G I A + ++ + KG
Sbjct: 367 LVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG 426
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
PD T+ +L++G C+ L +A ++ + + + ++ + LC+
Sbjct: 427 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 478
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 178/413 (43%), Gaps = 8/413 (1%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFD 178
Y ++ L +T A +F+++ + P + N +L L G + A +
Sbjct: 154 AYCTVVCGLYAHGHTHDARQLFDQMLHT--HVFPNLAAFNKVLHALCKRGDVLEAGLLLG 211
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
++ RG+ + + ++I CE +L + + ++D +R + V +I G CK
Sbjct: 212 KVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA---VPDVVTYNTLIRGLCK 268
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+EA L + + C PD Y + + + + V E +LK G P
Sbjct: 269 KSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVT 328
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMI 357
Y I GL E + A EL + D V N+L+ G A+ N M
Sbjct: 329 YCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMA 388
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
E+G P + T + + LCK + V Y D+ ++N ++ C +L
Sbjct: 389 EEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLD 448
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
A +++ M G+ PD YNS++ C+ + + + +M GC N TYNILI
Sbjct: 449 SALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 508
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
F ++E A ++ M ++G+ PDA ++ +L+ G C+ +L+ A+ +F K
Sbjct: 509 ENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 561
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 175/402 (43%), Gaps = 15/402 (3%)
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
+P ++ + +A++V + V +N +L+ L A+ M ++G
Sbjct: 238 LPEAVRLVDGMRAYAVPDVVTYN----------TLIRGLCKKSMPQEAMHYLRRMMNQGC 287
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSML-DEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
+ I +C+ + + + +L D V K + V +I+G C VE
Sbjct: 288 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFK---GFVPDQVTYCSLINGLCAEGDVER 344
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A ++ +E + + KPD + Y + + L G + V+ + + G P Y I
Sbjct: 345 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 404
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVP 363
GL I +A + + + D N LI G + SA+ M E G P
Sbjct: 405 GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAP 464
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
T +++ LCK K +E+ E ++ + + +YN+++ C S ++ EA VI
Sbjct: 465 DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 524
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+M ++GL PD +N+L+ CR L A L+ ++ G S T+N LI FS
Sbjct: 525 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 584
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+ A ++F ML KG D+ TY L++G C+ N+ A+
Sbjct: 585 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAY 626
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 164/396 (41%), Gaps = 49/396 (12%)
Query: 167 DGY-----IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE-- 219
DGY + A ++ + +G + + I C + + L + +E + +
Sbjct: 299 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 358
Query: 220 ------NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
NS++ G + LI+H A +V++E+ C PD Y IV
Sbjct: 359 PDIVVYNSLVKGLCLQGLILH----------ALQVMNEMAEEGCHPDIQTYNIVINGLCK 408
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID--- 330
MG++ + VV+ G P + I G ++ A +L E + D
Sbjct: 409 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 468
Query: 331 -DDVLNALI--GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
+ VLN L G V+ ++ F MI KG P T + L +N C+ NK +E +V
Sbjct: 469 YNSVLNGLCKAGKVNEVNET-----FQEMILKGCHPNPITYNILIENFCRSNKMEEASKV 523
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
+S D S+N ++ C +G L AY + Q+++ KG +N+L+ A
Sbjct: 524 IVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSG 583
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+ + A+K++D+M + G + TY +LI + ++ A M++KG P +T
Sbjct: 584 KLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMST 643
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
+ ++ L +VNH V A I+
Sbjct: 644 FGRVINSL---------------TVNHRVFQAVGII 664
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 140/327 (42%), Gaps = 4/327 (1%)
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
V I + + R+ +A + + + C P AY + + + V +
Sbjct: 55 VASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLA 114
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSA 349
GV+P + + + + R A L + V+ L + D R
Sbjct: 115 AGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ- 173
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F+ M+ P L+ + + LCKR E + + ++ +YN+ +
Sbjct: 174 --LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRG 231
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC +GRL EA ++ M+ + PDV YN+L+ C++ + + A +M GC +
Sbjct: 232 LCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 290
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
TYN +I + ++ ++ A L + + KG PD TY SL+ GLC E +++ A E+FN
Sbjct: 291 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFN 350
Query: 530 KSVNHDVMLARSILSTFMISLCRRVLI 556
++ + + ++ + LC + LI
Sbjct: 351 EAQAKGIKPDIVVYNSLVKGLCLQGLI 377
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 157/393 (39%), Gaps = 50/393 (12%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y++I+ + +LK D Y +I L + ++A +FNE
Sbjct: 292 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 351
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRG------------------ 184
+ + I P+I NSL+ L G I +AL++ +EM+ G
Sbjct: 352 AQ--AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKM 409
Query: 185 --VEFSTI---------------GFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
+ +T+ F I +C+ KL L +++ R E + ++
Sbjct: 410 GNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVE--RMWEYGIAPDTI 467
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+++G CK +V E + E+ ++ C P+ I Y I+ E F + E V+ K
Sbjct: 468 TYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM 527
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS-IDP 346
+ G+ P + I G + A L + + ++ D N LIG+ S ++
Sbjct: 528 SQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNM 587
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD----ELVEVYKVLSANDYFTDMES 402
A F+ M+ KG T L CK D LVE+ K + M +
Sbjct: 588 HMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIK----KGFIPSMST 643
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
+ +++ L + R+ +A G+I M + G+ P+V
Sbjct: 644 FGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV 676
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 91/216 (42%), Gaps = 6/216 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+S+L L + ++N ++ +++ + + Y +I + + ++A V
Sbjct: 467 ITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI-- 524
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
VK + E + P+ N+L+ +G ++ A +F ++ +G + F I F
Sbjct: 525 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 584
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+ + DE+ + + S ++I G CK V+ A+ L E+ + P
Sbjct: 585 LNMHMAEKIFDEMLSKGHRA--DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMS 642
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+ V + VF+ ++ K+GV P D
Sbjct: 643 TFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVD 678
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/505 (21%), Positives = 212/505 (41%), Gaps = 52/505 (10%)
Query: 57 NPYLLTHHSLALGFFNWASQ-----------QPNFTHSPLSYHSILKSLSLSRQINAIDS 105
+P ++ + ++ GFFN + ++Y+ I+ +L +R ++ +
Sbjct: 262 SPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAEL 321
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAV 163
VL+Q+ + D+ Y +I ++A +F E+K + P I CNS LA
Sbjct: 322 VLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKK--RGLIPNIVTCNSFLAS 379
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L G A + FD M+ +G + + + + ++ + + ++ N +
Sbjct: 380 LCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMK--SNGIA 437
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
+ ++IH + K V++A + E++ + PD + Y V F MG + +
Sbjct: 438 ANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEK 497
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVS 342
+ G+ P T Y I G + + +AKEL E+I G
Sbjct: 498 FNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGI---------------- 541
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
PR IVFF+ +I +LCK + + +++ + + + +
Sbjct: 542 ---PRPDIVFFSSVIN---------------SLCKDGRVMDAHDIFDLATDIGERPGVIT 583
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+N ++ C G++ +A+ ++ M+ G++PD+ YN+L++ + + L+ +M
Sbjct: 584 FNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQ 643
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G N TY I+++ G A + FH M+E G + Y +L GLC+
Sbjct: 644 RKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCAD 703
Query: 523 AAFEVFNKSVNHDVMLARSILSTFM 547
A +F K +V + +IL+T +
Sbjct: 704 EAIILFQKLGTMNVKFSITILNTMI 728
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 173/397 (43%), Gaps = 36/397 (9%)
Query: 158 NSLLAVLASDGYIDNALK-MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
N+LL L + A+ + MS G + + + + + C+N+ + L +L +
Sbjct: 196 NTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMA 255
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
K+ + V +IHGF +A + E+ + KPD + Y ++ + +
Sbjct: 256 KQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARA 315
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ + E+VL++ G P T Y I G R+ EA ++
Sbjct: 316 MDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKM------------------ 357
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
F M ++G +P + T ++ +LCK +S E E + ++A +
Sbjct: 358 ----------------FREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGH 401
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ SY ++ + G + G+ MK G+ + + L+ A + ++ A
Sbjct: 402 KPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAML 461
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
++ +M G S ++ TY+ +IS FS +G + A+ F+ M+ +G+ P+ Y+S+++G C
Sbjct: 462 IFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFC 521
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSI-LSTFMISLCR 552
L A E+ ++ +N + + S+ + SLC+
Sbjct: 522 MHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCK 558
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/478 (23%), Positives = 207/478 (43%), Gaps = 18/478 (3%)
Query: 85 LSYHSILKSL---SLS-RQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
+SY +LK+L S+S R ++ + + KQ + D Y +I T KA S
Sbjct: 229 VSYSIVLKALCDNSMSQRALDLLQMMAKQG--GACSPDVVAYSTVIHGFFNEGETGKACS 286
Query: 141 VFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+F+E+ + + P++ N ++ L +D A + +M+ G + T+ + I
Sbjct: 287 LFHEMTR--QGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHG 344
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
+ +L + M E++KR +I V + CK R +EA + D + + K
Sbjct: 345 YATLGRLKEAAKMFREMKKR--GLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHK 402
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD +Y + + G + + + G+A + + I + +A +
Sbjct: 403 PDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLI 462
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ + D + +I + S + + A+ FN M+ +G P + S++ + C
Sbjct: 463 FTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCM 522
Query: 378 RN---KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
K+ ELV ++++ D+ ++ +++ LC GR+ +A+ + G P
Sbjct: 523 HGGLVKAKELVS--EMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPG 580
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V +NSL++ C + A K+ D M G ++ TYN L+ + + G I L LF
Sbjct: 581 VITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFR 640
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M KGV P+ TY +L GL + AA + F++ + + SI + LCR
Sbjct: 641 EMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCR 698
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 38/161 (23%)
Query: 402 SYNVMVS-----------------------------------FLCTSGRLREAYGV-IQE 425
+YN+++ LC + R EA V +
Sbjct: 159 TYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVLLHR 218
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG--CSGNLKTYNILISKFSEV 483
M G P+ Y+ +++A C + + A L M G CS ++ Y+ +I F
Sbjct: 219 MSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNE 278
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
GE A LFH M +GV PD TY +++ LC+ + A
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKA 319
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR- 491
P YN LM+ CCR L+ + +G + T N L+ E A+
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
L H M E G P+A +Y+ +L+ LC + Q A ++
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQ 252
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 192/417 (46%), Gaps = 13/417 (3%)
Query: 111 KVNKITLDSSVYRF--IIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEIC--NSLLAVLA 165
KV K+ L ++ F +I L + +A +F++ V C+ P++ N+++ L
Sbjct: 153 KVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQ---PDVYTYNTIINGLC 209
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMING 225
G A + +M G + + + + I C + + + L + ++ + I+
Sbjct: 210 KIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKG---ISP 266
Query: 226 SVIAVL-IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+ +I G CK R +EA +L+E+ PD + + ++ + F G V E VL
Sbjct: 267 DIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVL 326
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSS 343
K ++GV P Y + G + + EA++L V+++ + N LI G +
Sbjct: 327 KTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKA 386
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
A+ FN MI +G P + + L C+ K E ++++ + N D+ +Y
Sbjct: 387 KRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTY 446
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
++++ C G L +A+ + + M+ L P++ Y L+ A C+ + A+KL+ ++F
Sbjct: 447 SILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFV 506
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
G +++ Y +I+ + G ++ AL F NM G PD +Y ++ GL Q +
Sbjct: 507 QGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKD 563
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 181/433 (41%), Gaps = 38/433 (8%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L A++ Y D + + +M G+ + +F+ FC+ ++ S+L +V K
Sbjct: 99 LSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKL- 157
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+ V +I+G CK +A ++ D++ + C+PD Y + +G
Sbjct: 158 -GLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAA 216
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+LKK + G P Y I L +R + EA ++ + + + D +LI
Sbjct: 217 AAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQ 276
Query: 340 SVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS------ 392
+ + A N M +P + T + L CK K E + V K ++
Sbjct: 277 GLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEP 336
Query: 393 ----------ANDYFTDME-------------------SYNVMVSFLCTSGRLREAYGVI 423
+TD+ SYN++++ C + R+ EA +
Sbjct: 337 NVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLF 396
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
EM +GL P+ YN+L+ C+ LR A+ L+ M +G +L TY+IL+ F +
Sbjct: 397 NEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQ 456
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
G + A RLF M + P+ YT L+ +C+ N + A ++F++ + +
Sbjct: 457 GYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLY 516
Query: 544 STFMISLCRRVLI 556
+T + LC+ L+
Sbjct: 517 TTIINGLCKEGLL 529
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 151/348 (43%), Gaps = 3/348 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
++L+ L D ++ AL +F M +G+ + I C+ ++ + ++L+E+
Sbjct: 237 STLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTS 296
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
N M + VL+ FCK +V EA VL + +P+ + Y + + L V
Sbjct: 297 L-NIMPDIVTFNVLV-DTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDV 354
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E + G P Y I G +RI EA +L ++ T ++ N L
Sbjct: 355 VEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTL 414
Query: 338 IGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I + R A F M G +P L T S L CK+ + +++ + +
Sbjct: 415 IHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYL 474
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ Y ++V +C SG ++A + E+ +GL P V Y +++ C+E LL A +
Sbjct: 475 KPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALE 534
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
+ M A GC + +YN++I + + AL L M ++G D
Sbjct: 535 AFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIAD 582
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 139/296 (46%), Gaps = 10/296 (3%)
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL-GVAPRTND 298
+ +++A + + R+ P I + + MG ++ + L K+ +L G++P
Sbjct: 71 RNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYT 130
Query: 299 YREFILGLIVERRICEAKELGEVIVSG--KFTIDDDVLN--ALIGSVSSIDP-RSAIVFF 353
F+ +R+ +LG +++ K + ++ LI + + A+ F
Sbjct: 131 LSIFMNCFCQLQRV----DLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELF 186
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
+ M+ KG P + T + + LCK ++ + K + +M +Y+ ++ LC
Sbjct: 187 DDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRD 246
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
+ EA + MK KG+ PD+ Y SL++ C+ + A L ++M + ++ T+
Sbjct: 247 RLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTF 306
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
N+L+ F + G++ AL + M E GV P+ TY+SL+ G T++ A ++F+
Sbjct: 307 NVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFH 362
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 165/371 (44%), Gaps = 23/371 (6%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
A QPN ++Y +++ SL R +N + +K I+ D Y +I L +
Sbjct: 227 AGCQPNM----VTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFS 282
Query: 134 NTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVE----- 186
++A ++ NE+ +I P+I N L+ +G + AL + M+ GVE
Sbjct: 283 RWKEASALLNEM--TSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVT 340
Query: 187 FSTIGFGVFIWK-FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
+S++ +G +W E KL V M+ + K N ++I+G+CK KR++EA
Sbjct: 341 YSSLMYGYSLWTDVVEARKLFHV--MITKGCKPNIFSYN------ILINGYCKAKRIDEA 392
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
++ +E+ + P+ ++Y + F +G + E + + + G P Y + G
Sbjct: 393 MQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDG 452
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPT 364
+ + +A L + S + + L+ ++ S + + A F+ + +G P
Sbjct: 453 FCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPH 512
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
+ + + LCK DE +E ++ + A+ D SYNV++ L A ++
Sbjct: 513 VQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVG 572
Query: 425 EMKRKGLDPDV 435
EM+ +G DV
Sbjct: 573 EMRDRGFIADV 583
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/492 (22%), Positives = 210/492 (42%), Gaps = 39/492 (7%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSR-----------QINAIDSV--------- 106
AL FF W +++ F H+ S+ ++L LS R +N D+
Sbjct: 73 ALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVSADA 132
Query: 107 ---LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLL 161
+++ ++ L Y F + SL + T+ V++++ + + P+ N+++
Sbjct: 133 IQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQ--DGLLPDTVTYNTMI 190
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM-----LDEVR 216
+G + A + F + G+E T + +C +L + + L +
Sbjct: 191 KSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQ 250
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+ E S ++I G C K V +A + ++ C P+ A+ + G
Sbjct: 251 RNEYSY-------TILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGR 303
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
V + ++ + GV P Y I+G R+ +A ++ E++ DD N
Sbjct: 304 VGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNT 363
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
LI + A N +++G PT+ T +NL C K D+ + + + ++
Sbjct: 364 LIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKC 423
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D++ + +++ L RL+EA ++ E+ GL P+V Y S+++ C+ + A +
Sbjct: 424 KLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALE 483
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ M GC N TYN L+ + ++ A+ L M + G+ P+ TYT+LL+G C
Sbjct: 484 VLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC 543
Query: 517 QETNLQAAFEVF 528
E + AF +F
Sbjct: 544 DEHDFDNAFRLF 555
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 192/462 (41%), Gaps = 9/462 (1%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
A Q S ++Y++++ S ++N + + ++ N D Y +I L K
Sbjct: 313 AMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK 372
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+ + N VK E P + +L+ D+AL+M ++M +
Sbjct: 373 TEEAEELLNNAVK---EGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 429
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
FG I + +L + +L+E+ N ++ + II G+CK +V+ A +VL
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISA--NGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 487
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ C+P+ Y + + + +L K +K G+ P Y + G E
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 547
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
A L E++ D+ L ++ A ++F++ KG T + L
Sbjct: 548 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG--RAEEAYSFIVRKGVALTKVYYTTL 605
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
K +D + + + D +Y+V++ LC RL EA ++ +M +G+
Sbjct: 606 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 665
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
+ Y L++ RE AK+++++M +SG + TY + I+ + + G +E A
Sbjct: 666 KCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAED 725
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
L M +GVAPD TY L++G + AF + V
Sbjct: 726 LILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVG 767
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 109/498 (21%), Positives = 202/498 (40%), Gaps = 59/498 (11%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y SI+ S +++ VLK ++ + ++ Y ++ L++ K KA ++
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALL-- 520
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
K + I P + +LL + DNA ++F+ M G++ + V C+
Sbjct: 521 TKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA 580
Query: 203 AKLGQVLS----------------MLDEVRKRENSMINGSVIAVLI-------------- 232
+ + S ++D K N+ ++I +I
Sbjct: 581 GRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVL 640
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
+H CK KR+ EA +LD++ +R K AY I+ +E G + + + G
Sbjct: 641 LHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH 700
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALI---GSVSSIDPR 347
P Y FI E R+ +A++L ++ + + DV+ N LI G + ID
Sbjct: 701 KPSATTYTVFINSYCKEGRLEDAEDL--ILKMEREGVAPDVVTYNILIDGCGHMGYID-- 756
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN----KSDELVEVYKVLSANDYFTDME-- 401
A M+ P T L K+L K N +S + ++ ++ + + +E
Sbjct: 757 RAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERM 816
Query: 402 ----------SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+Y+ +++ C +GRL EA ++ M KGL P+ Y L++ CC
Sbjct: 817 VKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFF 876
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A M G L++Y +L+ G+ E LF ++LE G D + L
Sbjct: 877 EKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKIL 936
Query: 512 LEGLCQETNLQAAFEVFN 529
+GL + + F++ +
Sbjct: 937 NDGLLKAGYVDICFQMLS 954
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/517 (19%), Positives = 217/517 (41%), Gaps = 34/517 (6%)
Query: 56 INPYLLTHHSLALGFFNWASQQPN---FTHSPL--------SYHSILKSLSLSRQINAID 104
+ P T ++L LG+ + F PL SY +++ L ++ +
Sbjct: 214 LEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKAL 273
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLA 162
+ +K + + + + F+I L + A +F+ + N + P + N+++
Sbjct: 274 VLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQN--GVVPSVMTYNAMIV 331
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
+ G +++ALK+ + M G + I+ C+ K + +L+ K
Sbjct: 332 GYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKE--GF 388
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
V +I+G+C ++ ++A ++ +++ +CK D + KL+ S+ +++
Sbjct: 389 TPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFG------KLINSLIKKDR 442
Query: 283 VLKKKRKL------GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ + K L G+ P Y I G ++ A E+ +++ + N+
Sbjct: 443 LKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS 502
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
L+ G V A+ M + G +P + T + L + C + D +++++ N
Sbjct: 503 LMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNG 562
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D +Y V+ LC +GR EAY I RKG+ +Y +L++ + A
Sbjct: 563 LKPDEHAYAVLTDALCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAA 619
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L ++M GC+ + TY++L+ + + AL + M +G+ YT L++ +
Sbjct: 620 TLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEM 679
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+E A ++N+ + + + + F+ S C+
Sbjct: 680 LREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCK 716
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/494 (19%), Positives = 195/494 (39%), Gaps = 59/494 (11%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+ FT + +++ +++ ++ + + + ++ +K LD V+ +I SLI+ +
Sbjct: 385 KEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLK 444
Query: 137 KAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+A + NE+ N + P + S++ G +D AL++ M G + + +
Sbjct: 445 EAKELLNEISAN--GLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS 502
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
++ ++ KL + +++L +++K + +I + ++ G C + AF++ + +
Sbjct: 503 LMYGLVKDKKLHKAMALLTKMQK--DGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 560
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
KPD AY ++ + G E + +K GVA Y I G
Sbjct: 561 NGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK---GVALTKVYYTTLIDGF-------- 609
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+ D A MI++G P T S L
Sbjct: 610 ------------------------SKAGNTD--FAATLIERMIDEGCTPDSYTYSVLLHA 643
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK+ + +E + + +S + +Y +++ + G+ A + EM G P
Sbjct: 644 LCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPS 703
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+ Y + + C+E L A+ L +M G + ++ TYNILI +G I+ A
Sbjct: 704 ATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLK 763
Query: 495 NMLEKGVAPDATTYTSLLE----------------GLCQETNLQAAFEVFNKSVNHDVML 538
M+ P+ TY LL+ G+ L +++ + V H +
Sbjct: 764 RMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNP 823
Query: 539 ARSILSTFMISLCR 552
+ S+ + C+
Sbjct: 824 TVTTYSSLIAGFCK 837
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 122/281 (43%), Gaps = 8/281 (2%)
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
MG V+ + V + G+ P T Y I E + A +++ G +
Sbjct: 167 MGRVYSQLV------QDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFT 220
Query: 334 LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
NAL+ G + + R A F M G + + L + LC + + ++ ++
Sbjct: 221 CNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMK 280
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ ++ ++ ++S LC SGR+ +A + M + G+ P V YN+++ + +
Sbjct: 281 RDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMN 340
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A K+ + M +GC + TYN LI + + E A L +N +++G P T+T+L+
Sbjct: 341 DALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLI 399
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
G C A + NK ++ L + + SL ++
Sbjct: 400 NGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKK 440
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 125/538 (23%), Positives = 212/538 (39%), Gaps = 58/538 (10%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQIN-AIDSVLKQVKVNKITLDSSVYRFII 126
L F +++ P PL H++ L LS + A+ L + + SS + ++
Sbjct: 85 LRLFLFSALSPRLRSRPLHAHAVSLLLRLSSHADEAMFDALADARAAGLPASSSAFAALV 144
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVE 186
+ A F+ + + N++L L G I AL +++ M G
Sbjct: 145 AAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCA 204
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
+ + V + C+ G L M DE+ R M N + VL+ C +++EA
Sbjct: 205 PNRATYNVLMDGLCKQGMAGDALKMFDEMLDR-GIMPNVKIYTVLL-SSLCNAGKIDEAV 262
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSV---FEREVVLKKKRKLGVAPRTNDYREFI 303
++L ++ + C PD + Y +G V F+R V+L+ G A Y I
Sbjct: 263 QLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDG---GFALGLKGYSCLI 319
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRV 362
GL RR E + ++ + D + +I G + A+ F + M +KG V
Sbjct: 320 DGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFV 379
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + + K LC + + + N+ D + +M+ LC G + EA +
Sbjct: 380 PDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQI 439
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM--------------------- 461
EM G DP V YN+L++ RE L A+ L+ +M
Sbjct: 440 FDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCD 499
Query: 462 ---------------------------FASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
SG ++ TYN LI+ + ++GA+RLF
Sbjct: 500 SESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFK 559
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ KG++PD TY +L++GL + A +F + + SI ++ M SLCR
Sbjct: 560 ELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCR 617
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 109/505 (21%), Positives = 204/505 (40%), Gaps = 63/505 (12%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++ L L ++N L ++ L Y +I L Q + + F +
Sbjct: 278 VTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKT 337
Query: 145 VKFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ +I P++ + + A G I++AL D M +G T + + C++
Sbjct: 338 MLE--RNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDH 395
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L + ++ E+ +N+++ S ++I G CK V+EA ++ DE+ C P +
Sbjct: 396 GDLERAHTLRSEML--QNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVM 453
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + F G + E +L K ++G P + LG ++C+++ L +++
Sbjct: 454 TYNALIDGFYREGRL-EEARMLFHKMEMGNNPSL--FLRLTLG---ANQVCDSESLRKLV 507
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
D+ + G V A +I+ G VP + T + L LCK D
Sbjct: 508 --------HDMCQS--GQV-----LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLD 552
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
V ++K L D +Y ++ L + R +A + Q + + G P +S YNS+M
Sbjct: 553 GAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMM 612
Query: 443 EACCREDLLRPAKKLW-------------------------DQMFASGCSGNLK------ 471
+ CR L A LW D G +K
Sbjct: 613 RSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYG 672
Query: 472 -----TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
Y I + +V + ALR+FH + E G+ L+ LC + NL AA +
Sbjct: 673 YISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVD 732
Query: 527 VFNKSVNHDVMLARSILSTFMISLC 551
+ +++ ++L++ + + + LC
Sbjct: 733 IMLYALSKSIILSQPVGNRLLRWLC 757
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 105/473 (22%), Positives = 193/473 (40%), Gaps = 24/473 (5%)
Query: 75 SQQPNFTHSPLS--YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQG 132
S+ F P + Y++ILK+L S I ++ ++ + + Y ++ L +
Sbjct: 161 SRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQ 220
Query: 133 KNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
A +F+E+ +I LL+ L + G ID A+++ M +G + +
Sbjct: 221 GMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTY 280
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
F+ C+ ++ + L V ++ G +I G + +R +E F +
Sbjct: 281 NAFLSGLCKVGRVNEAFQRL--VMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTM 338
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
R PD + Y I+ G + + L +K G P T Y + L +
Sbjct: 339 LERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDL 398
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVSS---IDPRSAIVFFNFMIEKGRVPTLSTLS 369
A L ++ +D +I + +D A+ F+ M E G PT+ T +
Sbjct: 399 ERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVD--EAMQIFDEMGEHGCDPTVMTYN 456
Query: 370 NLSKNLCKRNKSDELVEVYK--------------VLSANDYFTDMESYNVMVSFLCTSGR 415
L + + +E ++ L AN D ES +V +C SG+
Sbjct: 457 ALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQ-VCDSESLRKLVHDMCQSGQ 515
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ +AY +++ + G+ PDV YN+L+ C+ L A +L+ ++ G S + TY
Sbjct: 516 VLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT 575
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
LI A+ LF N+L+ G +P + Y S++ LC+ L A ++
Sbjct: 576 LIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 110/243 (45%), Gaps = 35/243 (14%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ +N M+ G P +T + L LCK+ + + ++++ + +++ Y V++S
Sbjct: 191 ALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLS 250
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK----LWDQMFAS 464
LC +G++ EA ++ MK KG PD YN+ + C+ + A + L D FA
Sbjct: 251 SLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFAL 310
Query: 465 GCSG-------------------------------NLKTYNILISKFSEVGEIEGALRLF 493
G G ++ Y I+I +E G IE AL
Sbjct: 311 GLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFL 370
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
M +KG PD Y ++L+ LC +L+ A + ++ + ++++L + + + LC+R
Sbjct: 371 DVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKR 430
Query: 554 VLI 556
L+
Sbjct: 431 GLV 433
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 78/420 (18%), Positives = 158/420 (37%), Gaps = 55/420 (13%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL F + ++ F Y+++LK L + ++ ++ N + LDS+ +I
Sbjct: 366 ALSFLD-VMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMI 424
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFD--EMSHRG 184
L + +A +F+E+ + D N+L+ +G ++ A +F EM +
Sbjct: 425 CGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNP 484
Query: 185 VEFSTIGFGV-----------FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LI 232
F + G + C++ GQVL +R +S + V+ +
Sbjct: 485 SLFLRLTLGANQVCDSESLRKLVHDMCQS---GQVLKAYKLLRSIIDSGVVPDVVTYNTL 541
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I+G CK + ++ A ++ EL+++ PD I Y + + + ++ + + G
Sbjct: 542 INGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGS 601
Query: 293 APRTNDYREFILGLIVERRICEAKEL--------------GEVIVSGKFTIDDDVLNALI 338
+P + Y + L +++ +A L EV+ + I+D L+ +
Sbjct: 602 SPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGV 661
Query: 339 GSVSSIDPR-----------------------SAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ ID A+ F+ + E G T + + L L
Sbjct: 662 RELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYL 721
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C + V++ + N ++ +LC R ++A + M G D DV
Sbjct: 722 CWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQALAWRMHLVGYDMDV 781
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 177/374 (47%), Gaps = 3/374 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L +G + +A+ + D M G + + + +G + C++ + + +L ++ +
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R+ + +V +II G CK ++ AF + +E+ I+ K D I Y + F G
Sbjct: 241 RKIKL--DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ +L+ K + P + I + E ++ EA+EL + ++ + D +L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G A + M+ KG P + T + L CK N D+ +E+++ +S
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D +YN ++ C G+L A + QEM + + PD+ Y L++ C A +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+++++ S ++ YNI+I +++ A LF ++ KGV PD TY ++ GLC
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 517 QETNLQAAFEVFNK 530
++ +L A +F K
Sbjct: 539 KKGSLSEADLLFRK 552
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 173/380 (45%), Gaps = 7/380 (1%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L +V+A D L + +M +G+ + + I C KL S + ++ K
Sbjct: 78 LFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLG 137
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+V +I+G C RV EA +++D + KP I + L G V +
Sbjct: 138 YE--PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSD 195
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+++ + + G P Y + + + A EL + K +D + +I
Sbjct: 196 AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIID 255
Query: 340 SV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ S+D +A FN M KG + + L + C + D+ ++ + +
Sbjct: 256 GLCKDGSLD--NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ +++ ++ G+LREA + +EM ++G+ PD Y SL++ C+E+ L A
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ D M + GC N++T+NILI+ + + I+ L LF M +GV D TY +L++G C
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 517 QETNLQAAFEVFNKSVNHDV 536
+ L+ A E+F + V+ V
Sbjct: 434 ELGKLEVAKELFQEMVSRRV 453
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 207/494 (41%), Gaps = 72/494 (14%)
Query: 51 LVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQV 110
L +V + LL + GF QPN ++Y +LK + S Q +L+++
Sbjct: 189 LNGKVSDAVLLIDRMVETGF------QPN----EVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 111 KVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYI 170
+ KI LD+ Y II L + + AF++FNE++ I +L+ G
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D+ K+ +M R + + F I F + KL + + E+ +R S +V
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS--PDTVTYT 356
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I GFCK ++++A +LD + + C P+ + I+ + + + + +K
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
GV T Y I G ++ AKEL + +VS + R I
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV-------------------RPDI 457
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
V + +++ LC + ++ +E+++ + + D+ YN+++ +
Sbjct: 458 VSYKILLD---------------GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C + ++ +A+ + + KG+ PDV YN ++ C++ L A L+ +M G S N
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Query: 471 KTYNILISKFSEVGEIEG------------------------ALRLFHNMLEKGVAPDAT 506
TYNILI + +GE + AL ML+ G PD
Sbjct: 563 CTYNILIR--AHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVF 620
Query: 507 TYTSLLEGLCQETN 520
T+T+LL C E N
Sbjct: 621 TFTTLLRPFCLEEN 634
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 93/213 (43%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ I A+ F M P L S L + + + D ++++ K + +
Sbjct: 47 GIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHN 106
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ + ++M++ C +L A+ + ++ + G +PD +++L+ C E + A +L D
Sbjct: 107 LYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVD 166
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M G L T N L++ G++ A+ L M+E G P+ TY +L+ +C+
Sbjct: 167 RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSG 226
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A E+ K + L S + LC+
Sbjct: 227 QTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 169/379 (44%), Gaps = 45/379 (11%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NSL+ G +D+A K+ M +G+ + + + I C++ K + +L+E++
Sbjct: 131 NSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKA 190
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + + +IHG CK ++EEA ++L + C PD + Y + F G +
Sbjct: 191 --SGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKL 248
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E + L++ RK +P Y I GL +I EA+
Sbjct: 249 LEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQ--------------------- 287
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRV-PTLSTLSNLSKNLCKRNKSDELVEVYKVLS---A 393
V + M E G V P + T S + LCK SD LVE K+L
Sbjct: 288 -------------VILDQMQESGDVLPDVVTYSTVINGLCK---SDMLVEAQKLLDRMCK 331
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
D+ +Y ++ LC GRL EA ++Q MKR G P+V Y +L+ C+ +
Sbjct: 332 AGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDE 391
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE--KGVAPDATTYTSL 511
A+++ ++M +GC NL TYN +++ G I+ A +L M + +PDA TY ++
Sbjct: 392 AERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTI 451
Query: 512 LEGLCQETNLQAAFEVFNK 530
+ L +Q A ++ +
Sbjct: 452 VNALMSSDLVQEAEQLLEQ 470
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 173/376 (46%), Gaps = 7/376 (1%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
++ +A+ G +D A+ D + G + + + + I F KL + + +L+E+R+R
Sbjct: 31 IITAMANAGDLDGAM---DHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRER- 86
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
V +++ CK V A V+ ++ P+ + + + + F G+V +
Sbjct: 87 -GCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDD 145
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+L G+ P Y I GL ++ EAKE+ E + + T D +ALI
Sbjct: 146 ARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIH 205
Query: 340 SVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
+ D A M G P + S++ CK K E + + +
Sbjct: 206 GLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSP 265
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKG-LDPDVSFYNSLMEACCREDLLRPAKKL 457
D+ +YN ++ LC G++ EA ++ +M+ G + PDV Y++++ C+ D+L A+KL
Sbjct: 266 DVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKL 325
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
D+M +GC+ ++ TY +I + G +E A L M G AP+ TYT+L+ GLC+
Sbjct: 326 LDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCK 385
Query: 518 ETNLQAAFEVFNKSVN 533
+ A V + N
Sbjct: 386 ARKVDEAERVMEEMRN 401
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 189/405 (46%), Gaps = 20/405 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
+L+A A ++ A+K+ +EM RG + + + V + C KL V + D V+K
Sbjct: 61 TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALC---KLSMVGAAQDVVKK 117
Query: 218 RENSMINGSVIAVL-----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
MI G + ++ GFCK V++A K+L + + +P+ + Y + +
Sbjct: 118 ----MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLC 173
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
E + VL++ + GV P Y I GL +I EA+++ + T D
Sbjct: 174 KSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVV 233
Query: 333 VLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK-SDELVEVYKV 390
V +++I + S A M ++ + P + T + + LCK K ++ V + ++
Sbjct: 234 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQM 293
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ D D+ +Y+ +++ LC S L EA ++ M + G +PDV Y ++++ C+
Sbjct: 294 QESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGR 353
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
L A+ L M +GC+ N+ TY LIS + +++ A R+ M G P+ TY +
Sbjct: 354 LEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNT 413
Query: 511 LLEGLCQETNLQAAFEVFNK------SVNHDVMLARSILSTFMIS 549
++ GLC ++ A ++ + + D R+I++ M S
Sbjct: 414 MVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSS 458
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 148/318 (46%), Gaps = 5/318 (1%)
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
C + A ++L+E++ PD + + M + + + + R +G P
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPI---ITAMANAGDLDGAMDHLRSMGCDPNV 57
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV-FFNF 355
Y I +++ EA +L E + + N L+ ++ + A
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
MIE G P + T ++L CKR D+ ++ ++ A ++ +Y+ ++ LC S +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
EA V++EMK G+ PD Y++L+ C+ D + A+++ +M SGC+ ++ Y+
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK-SVNH 534
+I F + G++ A + M ++ +PD TY ++++GLC+ + A + ++ +
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297
Query: 535 DVMLARSILSTFMISLCR 552
DV+ ST + LC+
Sbjct: 298 DVLPDVVTYSTVINGLCK 315
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 88/430 (20%), Positives = 151/430 (35%), Gaps = 144/430 (33%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
LG +PN ++Y +++ L S++ VL+++K + +T D+ Y +I
Sbjct: 150 LGIMVAKGMRPNV----VTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIH 205
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
L + I+ A +M M+ G
Sbjct: 206 GLCKADK-----------------------------------IEEAEQMLRRMAGSGCTP 230
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRE--------NSMING-------------- 225
+ + I FC++ KL + L E+RK+ N++I+G
Sbjct: 231 DVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVIL 290
Query: 226 ------------SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
V +I+G CK + EA K+LD + C PD + Y + +
Sbjct: 291 DQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCK 350
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
G + E E +L+ ++ G AP Y I GL R++ EA+ + E ++
Sbjct: 351 CGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVME-----------EM 399
Query: 334 LNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
NA G P L T + + LC
Sbjct: 400 RNA-----------------------GCPPNLVTYNTMVNGLC----------------- 419
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK--RKGLDPDVSFYNSLMEACCREDLL 451
SGR++EA ++Q MK R PD + Y +++ A DL+
Sbjct: 420 ------------------VSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLV 461
Query: 452 RPAKKLWDQM 461
+ A++L +QM
Sbjct: 462 QEAEQLLEQM 471
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 11/147 (7%)
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C +G L A +++EMK G PD + ++ A L A D + + GC N+
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNV 57
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TY LI+ F+ ++E A++L M E+G P+ TY L++ LC+ + + AA +V K
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117
Query: 531 SVNH----DVMLARSILSTFMISLCRR 553
+ +VM S++ F C+R
Sbjct: 118 MIEGGFAPNVMTFNSLVDGF----CKR 140
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 207/473 (43%), Gaps = 11/473 (2%)
Query: 87 YHSILKSLSLSRQIN-AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+ +LK L +++++ A D +L+++ T D Y ++ K ++A + + +
Sbjct: 131 FSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMM 190
Query: 146 KFNCEDIGPEICNSLLAVLASDG-----YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+ + G N + DG +D A +F M +GV + + I +
Sbjct: 191 ADDGD--GSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYL 248
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
K +V+ ML E+ + + I +++ CK R EA + D + + KP+
Sbjct: 249 SIGKWKEVVQMLQEMST--HGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPN 306
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
Y I+ + GS+ E L GV+P + + + I EA + +
Sbjct: 307 VTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFD 366
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+ + + + ALI ++ + A++ FN MI++G P + S+L LC +
Sbjct: 367 KMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVD 426
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K ++ E++ + D +N ++ LC GR+ EA +I M R G+ PDV YN
Sbjct: 427 KWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYN 486
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+L++ C + A KL D + + G + TYN L+ + + I+ A LF ML K
Sbjct: 487 TLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMK 546
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
G+ PD TY ++L GL Q A E++ +N + + + LC+
Sbjct: 547 GLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCK 599
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/466 (19%), Positives = 204/466 (43%), Gaps = 7/466 (1%)
Query: 67 ALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
AL + + + +H+P ++Y +++ L ++ ++ V + + + ++ Y
Sbjct: 183 ALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTC 242
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
+I + ++ + E+ + I LL L +G A +FD + +G
Sbjct: 243 LIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKG 302
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
++ + +G+ + + L ++ S LD + N + I ++ + K ++E
Sbjct: 303 IKPNVTIYGILLHGYATEGSLSEMHSFLDLMVG--NGVSPDHHIFNIMFCAYAKKAMIDE 360
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A + D++R + P+ + Y + + +G V + + + G+ P + +
Sbjct: 361 AMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVY 420
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFNFMIEKGRV 362
GL + +A+EL ++ +D N L+ ++ + R A + M+ G
Sbjct: 421 GLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCR-EGRVMEAQRLIDLMLRVGVR 479
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + + + L C + DE ++ V+ + D +YN ++ C + R+ +AY +
Sbjct: 480 PDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSL 539
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+EM KGL PDV YN+++ + AK+L+ M S N+ TYNI+I+ +
Sbjct: 540 FREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCK 599
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ A ++FH++ K + D T ++ L + + A ++F
Sbjct: 600 NNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLF 645
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 159/371 (42%), Gaps = 8/371 (2%)
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
S+ + + I FC +L + + K +N +VI ++ G C KRV+EA
Sbjct: 91 SSFTYTILIGCFCRMGRLKHGFAAFGLILK-TGWRVNDTVIFSQLLKGLCDAKRVDEATD 149
Query: 248 VLDELRIRE--CKPDFIAYRIVAEEF---KLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
+L R+ E C PD +Y I+ + F K E ++ P Y
Sbjct: 150 ILLR-RMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTV 208
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV-FFNFMIEKGR 361
I GL + + AK + + ++ ++ LI SI +V M G
Sbjct: 209 IDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGL 268
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P + L LCK + E ++ + ++ Y +++ T G L E +
Sbjct: 269 QPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHS 328
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+ M G+ PD +N + A ++ ++ A ++D+M S N+ TY LI
Sbjct: 329 FLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALC 388
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
++G ++ A+ F+ M+++G+ PD ++SL+ GLC + A E+F + ++ + L
Sbjct: 389 KLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTV 448
Query: 542 ILSTFMISLCR 552
+T M +LCR
Sbjct: 449 FFNTLMCNLCR 459
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 188/436 (43%), Gaps = 17/436 (3%)
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSL 160
N DSV+++ I + ++Y ++ + + S + + N I N +
Sbjct: 293 NIFDSVIRK----GIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIM 348
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
A ID A+ +FD+M + + + + +G I C KLG+V D+ + N
Sbjct: 349 FCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALC---KLGRV----DDAVLKFN 401
Query: 221 SMINGSVIAVL-----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
MI+ + + +++G C + E+A ++ E+ + + D + + + G
Sbjct: 402 QMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREG 461
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
V E + ++ ++GV P Y + G + RI EA +L +VIVS D N
Sbjct: 462 RVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYN 521
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
L+ G + A F M+ KG P + T + + L + + E E+Y + +
Sbjct: 522 TLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINS 581
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ +YN++++ LC + + EA+ + + K L D+ N ++ A + A
Sbjct: 582 RTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDA 641
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
L+ + A G +++TY ++ + G +E LF M E G AP++ +L+
Sbjct: 642 MDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRW 701
Query: 515 LCQETNLQAAFEVFNK 530
L ++ A +K
Sbjct: 702 LLHRGDINRAGAYLSK 717
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 183/439 (41%), Gaps = 11/439 (2%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PN T + H SLS + +D ++ N ++ D ++ + + +
Sbjct: 304 KPNVTIYGILLHGYATEGSLSEMHSFLDLMVG----NGVSPDHHIFNIMFCAYAKKAMID 359
Query: 137 KAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+A +F+ K + + P I +L+ L G +D+A+ F++M G+ F
Sbjct: 360 EAMHIFD--KMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSS 417
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
++ C K + + EV + + +V ++ C+ RV EA +++D +
Sbjct: 418 LVYGLCTVDKWEKAEELFFEVLDQGIRL--DTVFFNTLMCNLCREGRVMEAQRLIDLMLR 475
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
+PD I+Y + + L G + E +L +G+ P Y + G RRI +
Sbjct: 476 VGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDD 535
Query: 315 AKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
A L ++ T D N ++ G + A + MI + T + +
Sbjct: 536 AYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIIN 595
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
LCK N DE +++ L + D D+ + N+M+ L GR +A + + GL P
Sbjct: 596 GLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVP 655
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
DV Y + E +E L +L+ M +G + N + N L+ G+I A
Sbjct: 656 DVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYL 715
Query: 494 HNMLEKGVAPDATTYTSLL 512
+ EK + +A+T + L+
Sbjct: 716 SKLDEKNFSLEASTTSMLI 734
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 169/402 (42%), Gaps = 24/402 (5%)
Query: 67 ALGFFNWASQQ---PNFTHSPLSYHSILKSLSLSRQINAIDSVLK--QVKVNKITLDSSV 121
A+ F+ QQ PN ++Y +++ +L +++ D+VLK Q+ +T D V
Sbjct: 361 AMHIFDKMRQQRLSPNI----VTYGALIDALCKLGRVD--DAVLKFNQMIDEGMTPDIFV 414
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
+ ++ L +KA +F EV + N+L+ L +G + A ++ D M
Sbjct: 415 FSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLML 474
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
GV I + + C ++ + +LD + + V ++HG+CK +R
Sbjct: 475 RVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSI--GLKPDKVTYNTLLHGYCKARR 532
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE-REVVLKKKRKLGVAPRTN--- 297
+++A+ + E+ ++ PD + Y + G E +E+ L + RT
Sbjct: 533 IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSM-----INSRTQMNI 587
Query: 298 -DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNF 355
Y I GL + EA ++ + S +D N +IG++ A+ F
Sbjct: 588 YTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFAT 647
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
+ G VP + T +++NL K +EL E++ + N + N +V +L G
Sbjct: 648 ISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGD 707
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
+ A + ++ K + S + L+ R + + AK L
Sbjct: 708 INRAGAYLSKLDEKNFSLEASTTSMLISIYSRGEYQQLAKSL 749
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 88/204 (43%), Gaps = 3/204 (1%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN---DYFTDMESYNVMVSFLCT 412
M E G P + + S L K C +++E +E+ +++ + + ++ +Y ++ LC
Sbjct: 155 MPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCK 214
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
+ + A GV Q M KG+ P+ Y L+ + ++ +M G +
Sbjct: 215 AQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYI 274
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
Y +L+ + G A +F +++ KG+ P+ T Y LL G E +L + V
Sbjct: 275 YAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMV 334
Query: 533 NHDVMLARSILSTFMISLCRRVLI 556
+ V I + + ++ +I
Sbjct: 335 GNGVSPDHHIFNIMFCAYAKKAMI 358
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 179/392 (45%), Gaps = 19/392 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+LL L + + AL +F +M V + F + C ++ + +++LD R
Sbjct: 54 NTLLHGLCVEDRVSEALDLFHQMCKPNV----VTFTTLMNGLCREGRVVEAVALLD--RM 107
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR-IRECKPDFIAYRIVAEEFKLMGS 276
E+ + + I+ G CK A +L ++ + KPD + Y + + G
Sbjct: 108 VEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGR 167
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ + + + + G+ P Y I G + EA+ L + ++ K + D +
Sbjct: 168 HTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSG 227
Query: 337 LIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA-- 393
LI + V D SA MI G P + T + L LC K + +E++K +
Sbjct: 228 LINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSM 287
Query: 394 ---------NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
N D+++YN+++S L G+ EA + +EM +G+ PD Y+S++
Sbjct: 288 MDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMING 347
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C++ L A +++D M + S N+ T+N LI+ + + G ++ L LF M +G+ +
Sbjct: 348 LCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVAN 407
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
A TY +L+ G + N+ + ++F + ++ V
Sbjct: 408 AITYITLIRGFRKVGNINGSLDIFQEMISSGV 439
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/490 (21%), Positives = 202/490 (41%), Gaps = 73/490 (14%)
Query: 57 NPYLLTHHSLALGFF--NWASQQPNFTH-----SPLSYHSILKSLSLSRQINAIDSVLKQ 109
+P L+T ++L G + S+ + H + +++ +++ L ++ ++L +
Sbjct: 47 HPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDR 106
Query: 110 VKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASD 167
+ + + + Y I+ + + +T A ++ +++ I P++ ++++ L D
Sbjct: 107 MVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME-ELSHIKPDVVIYSAIIDGLWKD 165
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G +A +F EM +G+ + + I FC + K
Sbjct: 166 GRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKW---------------------- 203
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
EA ++L E+ +R+ PD + + + G + + +L++
Sbjct: 204 ---------------SEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM 248
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR 347
GV P + GL C++ +L + + ++ A+ S+ ID
Sbjct: 249 ISSGVCPNVVTCNTLLDGL------CDSGKLKDAL---------EMFKAMQKSMMDIDAT 293
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A FN G P + T + L L K E E+Y+ + D +Y+ M+
Sbjct: 294 HA---FN-----GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMI 345
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+ LC RL EA + M K P++ +N+L+ C+ ++ +L+ +M G
Sbjct: 346 NGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIV 405
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ---AA 524
N TY LI F +VG I G+L +F M+ GV PD T ++L GL + L+ A
Sbjct: 406 ANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAM 465
Query: 525 FEVFNKSVNH 534
E S++H
Sbjct: 466 LEELQMSMDH 475
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 155/375 (41%), Gaps = 54/375 (14%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLD 250
F + I FC +KL LS ++ K + +++ ++HG C RV EA +
Sbjct: 18 FNILIKCFCSCSKLPFALSTFGKLTKLG---FHPTLVTFNTLLHGLCVEDRVSEALDLFH 74
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
++ CKP+ + + + G V E +L + + G+ P Y
Sbjct: 75 QM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG---------- 120
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRV-PTLSTLS 369
IV G + D V SA+ M E + P + S
Sbjct: 121 ----------TIVDGMCKMGDTV--------------SALNLLRKMEELSHIKPDVVIYS 156
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
+ L K + + ++ + F D+ +Y+ M++ C+SG+ EA ++QEM +
Sbjct: 157 AIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVR 216
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
+ PDV ++ L+ A +E L A+ L +M +SG N+ T N L+ + G+++ A
Sbjct: 217 KISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDA 276
Query: 490 LRLFHNMLE-----------KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
L +F M + GV PD TY L+ GL E A E++ + + ++
Sbjct: 277 LEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 336
Query: 539 ARSILSTFMISLCRR 553
S+ + LC++
Sbjct: 337 DTVTYSSMINGLCKQ 351
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D+ S+N+++ C+ +L A ++ + G P + +N+L+ C ED + A L+
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
QM C N+ T+ L++ G + A+ L M+E G+ P+ TY ++++G+C+
Sbjct: 74 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 519 TNLQAAFEVFNK-----SVNHDVMLARSIL 543
+ +A + K + DV++ +I+
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAII 159
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/464 (21%), Positives = 200/464 (43%), Gaps = 37/464 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+ I+ +L +R ++ + VL+Q+ N D+ Y +I ++A +F +
Sbjct: 301 VTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRK 360
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+K ICNS LA L G A ++FD M+ +G + + + + +
Sbjct: 361 MKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGW 420
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
++ + + ++ N + + ++IH + K V++A + E++ + PD + Y
Sbjct: 421 FADMIGLFNSMK--SNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTY 478
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIV 323
V F MG + + + G+ P T Y I G + + +AKEL E+I
Sbjct: 479 STVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMIN 538
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
G PR IVFFN +I +LCK + +
Sbjct: 539 KGI-------------------PRPDIVFFNSVIN---------------SLCKDGRVMD 564
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+++ +++ D+ ++ ++ C G++ +A+ ++ M+ G++ D+ Y++L++
Sbjct: 565 AHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLD 624
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+ + L+ +M G N TY I+++ G A + FH M+E G
Sbjct: 625 GYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTV 684
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
+ Y +L GLC+ A +F K +V + +IL+T +
Sbjct: 685 TVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMI 728
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 169/383 (44%), Gaps = 45/383 (11%)
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIH 234
+ MS G + + + + C+N+ + L + ++ +E + +V+A +IH
Sbjct: 215 LLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLF-QMMAKEGGACSPNVVAYNTVIH 273
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
GF K +A + E+ + KPD + Y ++ + ++ + E+VL++ G P
Sbjct: 274 GFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQP 333
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFN 354
T Y I G R+ EA ++ F
Sbjct: 334 DTVTYNCMIHGYATLGRLKEAAKM----------------------------------FR 359
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M +G +P + ++ +LCK +S E E++ ++A + D+ SY ++ + G
Sbjct: 360 KMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEG 419
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ G+ MK G+ D +N L+ A + ++ A ++ +M G S ++ TY+
Sbjct: 420 WFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYS 479
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
+IS FS +G + A+ F+ M+ +G+ P+ Y S+++G C L A E+ ++ +N
Sbjct: 480 TVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINK 539
Query: 535 -----DVMLARSILSTFMISLCR 552
D++ S+++ SLC+
Sbjct: 540 GIPRPDIVFFNSVIN----SLCK 558
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 191/443 (43%), Gaps = 22/443 (4%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFD 178
Y +I + T KA S+F+E+ + + P++ N ++ L +D A +
Sbjct: 267 AYNTVIHGFFKEGETGKACSLFHEMTR--QGVKPDVVTYNLIIDALCKARAMDKAELVLR 324
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
+M+ G + T+ + I + +L + M +++ R +I VI + CK
Sbjct: 325 QMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSR--GLIPNIVICNSFLASLCK 382
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
R +EA ++ D + + KPD ++Y + + G + + + G+A
Sbjct: 383 HGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRV 442
Query: 299 YREFILGLIVERRICEA----KELGEVIVSGKFTIDDDVLNAL--IGSVSSIDPRSAIVF 352
+ I + +A E+ + VS V++A +G ++ A+
Sbjct: 443 FNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTD-----AMEK 497
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRN---KSDELVEVYKVLSANDYFTDMESYNVMVSF 409
FN M+ +G P + ++ + C K+ ELV ++++ D+ +N +++
Sbjct: 498 FNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVS--EMINKGIPRPDIVFFNSVINS 555
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC GR+ +A+ + + G PDV + SL++ C + A K+ D M G +
Sbjct: 556 LCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETD 615
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ TY+ L+ + + G I L LF M KGV P+ TY +L GL + AA + F+
Sbjct: 616 IVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFH 675
Query: 530 KSVNHDVMLARSILSTFMISLCR 552
+ + + SI + LCR
Sbjct: 676 EMIESGTTVTVSIYGIILGGLCR 698
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 93/181 (51%), Gaps = 2/181 (1%)
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS--ANDYFTDMESYNVMVS 408
V + M E G VP + + S + K LC + S ++++++++ ++ +YN ++
Sbjct: 214 VLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIH 273
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
G +A + EM R+G+ PDV YN +++A C+ + A+ + QM +G
Sbjct: 274 GFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQP 333
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ TYN +I ++ +G ++ A ++F M +G+ P+ S L LC+ + A E+F
Sbjct: 334 DTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIF 393
Query: 529 N 529
+
Sbjct: 394 D 394
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 188/448 (41%), Gaps = 27/448 (6%)
Query: 82 HSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
H P +SY ++L + + + +K N I D V+ +I + + A
Sbjct: 401 HKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAM 460
Query: 140 SVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
+F E++ + + P++ +++++ + G + +A++ F++M RG++ +T + I
Sbjct: 461 LIFTEMQQ--QGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQ 518
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGS------VIAVLIIHGFCKGKRVEEAFKVLDE 251
FC + L + ++ E MIN V +I+ CK RV +A + D
Sbjct: 519 GFCMHGGLVKAKELVSE-------MINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDL 571
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ +PD I + + + + L+G + + +L +GV Y + G R
Sbjct: 572 VTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGR 631
Query: 312 ICEA----KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
I + +E+ V +L L + ++ R F+ MIE G T+S
Sbjct: 632 INDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKK---FHEMIESGTTVTVSI 688
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ LC+ N +DE + +++ L + + N M++ + R EA + +
Sbjct: 689 YGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATIS 748
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
GL P+ S Y ++ ++ + A ++ M SG + N +I E GEI
Sbjct: 749 ASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIA 808
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGL 515
A + K + +A+T TSL+ L
Sbjct: 809 KAGNYLSKVDGKRILLEAST-TSLMLSL 835
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR-LF 493
V Y+ LM+ CCR L+ + +G + T + L+ E A+ L
Sbjct: 157 VHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLL 216
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
H M E G P+ +Y+ +L+GLC + Q A ++F
Sbjct: 217 HRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQ 252
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 92/228 (40%), Gaps = 42/228 (18%)
Query: 51 LVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQV 110
+VAR I P +HS+ GF H L L S +++ I D V
Sbjct: 501 MVARGIQPNTAVYHSIIQGF---------CMHGGLVKAKELVSEMINKGIPRPDIVFFNS 551
Query: 111 KVNKITLDSSVYR-----------------FIIPSLIQG----KNTQKAFSVFNEVKFNC 149
+N + D V SLI G KAF + + ++
Sbjct: 552 VINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVG 611
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ ++LL +G I++ L +F EM +GV+ +T+ +G+ + + G+ +
Sbjct: 612 VETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGL---FRAGRTV 668
Query: 210 SMLDEVRKRENSMI-NGSVIAV----LIIHGFCKGKRVEEAFKVLDEL 252
+ RK+ + MI +G+ + V +I+ G C+ +EA + +L
Sbjct: 669 A----ARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKL 712
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 212/479 (44%), Gaps = 42/479 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y I+ + +A D K+ K +++ +Y +I + Q N +A ++ E
Sbjct: 377 VTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVRE 436
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ D +I ++++ G + L +F+ + G S + +G I + AK
Sbjct: 437 MEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLY---AK 493
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+G++ L+ + E++ I ++ ++I+GF K K AF + +++ KPD +
Sbjct: 494 VGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVL 553
Query: 264 YRIVAEEFKLMGSV----------------------------FEREVVLKKK-------R 288
Y + F MG++ F R +K+ R
Sbjct: 554 YNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMR 613
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKE-LGEVIVSGKFTIDDDVLNALIGSVSSIDPR 347
+ G P + + ILGL+ +R++ +A E L E+ ++G + + G + D
Sbjct: 614 RSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTG 673
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A +F + ++G + T L K CK + + V K +SA + + YN+++
Sbjct: 674 KAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILI 733
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE-DLLRPAKKLWDQMFASGC 466
G + EA ++Q+MK+ G+ PD+ Y S + ACC+ D+LR A K+ ++M SG
Sbjct: 734 DGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLR-ASKMMEEMETSGV 792
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
N+KTY LI ++ E ALR F M G+ PD Y L+ L + A+
Sbjct: 793 KPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDKAVYHCLMTALLSRATVTEAY 851
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y +MVS+ G + A + M+ +G++P Y SL+ A + A +M
Sbjct: 309 YGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCARKMK 368
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G +L TY+I++ F+++G + A R F ++ +A Y +++ CQ N+
Sbjct: 369 EEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMD 428
Query: 523 AA 524
A
Sbjct: 429 QA 430
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 73/179 (40%), Gaps = 10/179 (5%)
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNAL 174
+ LD Y ++ + + Q A +V E+ + N L+ A G + A
Sbjct: 687 LQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAA 746
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV-IAVLII 233
+ +M GV+ + FI C+ + + M++E+ E S + +V +I
Sbjct: 747 DLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEM---ETSGVKPNVKTYTTLI 803
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
HG+ + E+A + E+++ KPD Y LM ++ R V + + G+
Sbjct: 804 HGWARASLPEKALRCFQEMKLAGLKPDKAVYHC------LMTALLSRATVTEAYVRPGI 856
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 207/451 (45%), Gaps = 8/451 (1%)
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
++++ L +++ ++ K+ + I +Y +I Q TQKA+ + ++
Sbjct: 302 TLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQM--T 359
Query: 149 CEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
+ + P + +L L +D +A+ +F+EM+ G+ + I C+ KL
Sbjct: 360 GQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLP-DVFTYNNLIHWHCQAHKLR 418
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ L++ D ++K + ++L+ G+CK ++EA K+ E+ + KP+ + Y
Sbjct: 419 EALNLFDRMKKAGVKPSINTYNSLLM--GYCKKGCMDEAVKLYSEMPMEGFKPNVVTYIT 476
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ + +L + ++ GV+ Y I G+ + R+CE + + +S
Sbjct: 477 LMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEG 536
Query: 327 FTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
F N++I G V + SA + M EKG P + T ++ C+ SD +
Sbjct: 537 FIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMAL 596
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
++ + D+ +YN +++ C G + A ++ + + GL P+ YNSL+
Sbjct: 597 KMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGY 656
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
++++ K ++ M G + TY LI FS+ G + AL L+ M+ KG PDA
Sbjct: 657 KNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDA 716
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
T+T+L GLC+ ++ A ++ + DV
Sbjct: 717 FTFTALTHGLCRSGDIDGAKKLLEEMRRLDV 747
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/442 (20%), Positives = 195/442 (44%), Gaps = 22/442 (4%)
Query: 117 LDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLA----SDGYIDN 172
+D+ ++ ++ + ++ + A +F+E+ +I P+ LA+ A DG
Sbjct: 190 VDAWMFDALMSACLKEGMHEDAVRLFDEMP--GAEIDPDQRVYALAITALCKLGDG--GR 245
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
AL+M EM G + + + + ++ + L + DE+R M ++A +
Sbjct: 246 ALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKM--DVIVATTL 303
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
+ G+C + V A + E P + Y ++ +G + + ++ G+
Sbjct: 304 MRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGL 363
Query: 293 APRTNDYREFILGLIVERR----ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS 348
P T + + GL+ +RR +C +E+ + + FT + N + + R
Sbjct: 364 LPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLPDVFTYN----NLIHWHCQAHKLRE 419
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F+ M + G P+++T ++L CK+ DE V++Y + + ++ +Y ++
Sbjct: 420 ALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMR 479
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
AY ++ EMK+ G+ + YN L+ C D + + + G
Sbjct: 480 GYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIP 539
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ TYN +I+ F + G + A ++ M EKG+ P+ TYTS ++G C+ A ++
Sbjct: 540 TMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKML 599
Query: 529 N----KSVNHDVMLARSILSTF 546
N + + D++ ++++ F
Sbjct: 600 NDVRRRGLQPDIVAYNALINGF 621
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 143/322 (44%), Gaps = 16/322 (4%)
Query: 168 GYI-----DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
GYI DNA + DEM GV + + V I C ++ +V ML ++ M
Sbjct: 480 GYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGML------KSFM 533
Query: 223 INGSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
G + ++ II+GF K + AF V ++R + P+ I Y + + G
Sbjct: 534 SEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSD 593
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
+L R+ G+ P Y I G E + A +L +++ + V N+LI
Sbjct: 594 MALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLI 653
Query: 339 GSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
+++ + F+ MI+ G V ST + L K +E+Y + A Y
Sbjct: 654 TGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYI 713
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D ++ + LC SG + A +++EM+R + P+V YN L+ R+ L+ A +L
Sbjct: 714 PDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRL 773
Query: 458 WDQMFASGCSGNLKTYNILISK 479
D+M G + TY+IL+SK
Sbjct: 774 HDEMLNMGIQPDDTTYDILVSK 795
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 167/403 (41%), Gaps = 17/403 (4%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALK 175
D Y +I Q ++A ++F+ +K + P I NSLL G +D A+K
Sbjct: 400 DVFTYNNLIHWHCQAHKLREALNLFDRMKK--AGVKPSINTYNSLLMGYCKKGCMDEAVK 457
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
++ EM G + + + + + + ++LDE++ +N + ++I+G
Sbjct: 458 LYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMK--QNGVSCNDYTYNVLING 515
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF---KLMGSVFEREVVLKKKRKLGV 292
C RV E +L P + Y + F +MGS F V ++ R+ G+
Sbjct: 516 ICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAF---TVYQQMREKGL 572
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALI-GSVSSIDPRSA 349
P Y FI G R C L + + + D++ NALI G + A
Sbjct: 573 PPNIITYTSFIDGYC--RTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHA 630
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ +++ G P ++L N E+ + Y+ + D +Y ++
Sbjct: 631 LQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDG 690
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
G + A + EM KG PD + +L CR + AKKL ++M N
Sbjct: 691 FSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPN 750
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
+ YN+LI+ + +++ A RL ML G+ PD TTY L+
Sbjct: 751 VFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/439 (21%), Positives = 185/439 (42%), Gaps = 43/439 (9%)
Query: 114 KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN----SLLAVLASDGY 169
+I D VY I +L + + +A + E+K ++G + C+ +++ VL G
Sbjct: 222 EIDPDQRVYALAITALCKLGDGGRALRMLREMK----EVGFDTCDFTYRTMVDVLVKTGR 277
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR---ENSMINGS 226
++ AL++ DEM G + I + +C ++G L++ E K ++ G
Sbjct: 278 MEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGV 337
Query: 227 VIA------------------------------VLIIHGFCKGKRVEEAFKVLDELRIRE 256
+I L++ G +R ++A + +E+
Sbjct: 338 LIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEM-ADS 396
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
PD Y + + E + + +K GV P N Y ++G + + EA
Sbjct: 397 GLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAV 456
Query: 317 EL-GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+L E+ + G + + G ++ D +A + M + G T + L +
Sbjct: 457 KLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGI 516
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C ++ E+ + K + + M +YN +++ +G + A+ V Q+M+ KGL P++
Sbjct: 517 CMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNI 576
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y S ++ CR A K+ + + G ++ YN LI+ F + G + AL+L
Sbjct: 577 ITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVI 636
Query: 496 MLEKGVAPDATTYTSLLEG 514
+L+ G+AP+ Y SL+ G
Sbjct: 637 LLKDGLAPNTVVYNSLITG 655
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 90/209 (43%), Gaps = 1/209 (0%)
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
P +A + M+ +G VP + + ++L + + + + + ++ + Y D ++
Sbjct: 138 PSAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDA 197
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++S G +A + EM +DPD Y + A C+ A ++ +M G
Sbjct: 198 LMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVG 257
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
TY ++ + G +E ALR+ M + G D T+L+ G C + A
Sbjct: 258 FDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNAL 317
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCRRV 554
+F +++ D ++ ++ +I C +V
Sbjct: 318 NLFKETLK-DGIVPTKVMYGVLIRGCDQV 345
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 91/221 (41%), Gaps = 7/221 (3%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
LI + + A+ F M +G L K ++ V ++ + +
Sbjct: 164 LIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEI 223
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D Y + ++ LC G A +++EMK G D Y ++++ + + A +
Sbjct: 224 DPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALR 283
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ D+M +G ++ L+ + E+ AL LF L+ G+ P Y L+ G
Sbjct: 284 VNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCD 343
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSIL-STFMISLCRRVLI 556
Q Q A+E+ + M + +L STF +SL + L+
Sbjct: 344 QVGMTQKAYELCRQ------MTGQGLLPSTFELSLVLKGLL 378
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 77/213 (36%), Gaps = 34/213 (15%)
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK + + + + + T +Y MV L +GR+ EA V EM+ G D
Sbjct: 237 LCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMD 296
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V +LM C + A L+ + G Y +LI +VG + A L
Sbjct: 297 VIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCR 356
Query: 495 NMLEKGVAP----------------------------------DATTYTSLLEGLCQETN 520
M +G+ P D TY +L+ CQ
Sbjct: 357 QMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHK 416
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
L+ A +F++ V + + ++ ++ C++
Sbjct: 417 LREALNLFDRMKKAGVKPSINTYNSLLMGYCKK 449
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 208/460 (45%), Gaps = 11/460 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y +++ L SR+ N ++L ++ ++ + VY +I ++ N +AF + E
Sbjct: 188 FTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKE 247
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ ++L+ L G +D A + +M TI + + I +
Sbjct: 248 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHN 307
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+L E+ EN+ I+ +V ++IHG C+ E+A +L+E+ + KP+
Sbjct: 308 KKDAFRLLSEM---ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFV 364
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + G+V + K K+ V P Y I GL R+ E+ + +
Sbjct: 365 YAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQ 424
Query: 324 SGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
++ + LI G + + D SA M++ G P +L ++ K + +
Sbjct: 425 ERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIE 484
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
++ +K + D Y +++ L +SG + A+ V+ E+++ G PDV Y+SL+
Sbjct: 485 KVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLI 544
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
C+ A + D+M G N+ YN LI + G+I A +F+++L KG+
Sbjct: 545 SGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLV 604
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
P+ TYTSL++G C+ ++ AF ++N+ MLA I
Sbjct: 605 PNCVTYTSLIDGSCKVGDISNAFYLYNE------MLATGI 638
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 163/363 (44%), Gaps = 36/363 (9%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D A K+ EM RG +T+ + V I C + + + ++ + ++
Sbjct: 134 DTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME--DYGLVPDGFTYG 191
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I+G CK +R EA +LDE+ E KP+ + Y + + F G+ E ++K+
Sbjct: 192 ALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAA 251
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
GV P Y + GL C+ ++ D + L+ + R
Sbjct: 252 GVQPNKITYDNLVRGL------CKMGQM-------------DRASLLLKQMVRDSHRPDT 292
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ +N +IE + NK D + ++ +A ++ +Y++M+ L
Sbjct: 293 ITYNLIIEG--------------HFRHHNKKDAFRLLSEMENAG-ISPNVYTYSIMIHGL 337
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C SG +A +++EM KGL P+ Y L+ CRE + A +++D+M +L
Sbjct: 338 CQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDL 397
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
YN LI S+VG +E + + F M E+G+ P+ TY+ L+ G + +L++A ++ +
Sbjct: 398 YCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQR 457
Query: 531 SVN 533
++
Sbjct: 458 MLD 460
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 204/459 (44%), Gaps = 12/459 (2%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
A QPN ++Y ++++ L Q++ +LKQ+ + D+ Y II +
Sbjct: 251 AGVQPN----KITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHH 306
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIG 191
N + AF + +E++ I P + + + L G + A + +EM+ +G++ +
Sbjct: 307 NKKDAFRLLSEME--NAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFV 364
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ I +C + + D++ K +++ +I G K RVEE+ K +
Sbjct: 365 YAPLISGYCREGNVSLACEIFDKMTKV--NVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 422
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
++ R P+ Y + + G + E ++++ G+ P Y + +
Sbjct: 423 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 482
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK-GRVPTLSTLSN 370
I + + ++ +D+ + LI ++SS A IEK G VP + S+
Sbjct: 483 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSS 542
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LCK ++ + +S ++ YN ++ LC SG + A V + KG
Sbjct: 543 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 602
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L P+ Y SL++ C+ + A L+++M A+G + + Y++L + S G++E A+
Sbjct: 603 LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM 662
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
L M +G A +++ +L++G C+ +Q ++ +
Sbjct: 663 FLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLH 700
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 134/306 (43%), Gaps = 34/306 (11%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I +CK + + A KVL E+R R C + + Y ++ G+V E K G
Sbjct: 123 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 182
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
+ P Y I GL RR EAK AL+ +S + + +V
Sbjct: 183 LVPDGFTYGALINGLCKSRRSNEAK-------------------ALLDEMSCAELKPNVV 223
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
+ +NL + +DE ++ K + A + +Y+ +V LC
Sbjct: 224 VY---------------ANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLC 268
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
G++ A ++++M R PD YN ++E R + A +L +M +G S N+
Sbjct: 269 KMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVY 328
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
TY+I+I + GE E A L M KG+ P+A Y L+ G C+E N+ A E+F+K
Sbjct: 329 TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 388
Query: 532 VNHDVM 537
+V+
Sbjct: 389 TKVNVL 394
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%)
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
FM+ G P + T S L + CK + D +V + + +YNV+++ LC SG
Sbjct: 107 FMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG 166
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ EA+G ++M+ GL PD Y +L+ C+ AK L D+M + N+ Y
Sbjct: 167 AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYA 226
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
LI F G + A ++ M+ GV P+ TY +L+ GLC+ + A
Sbjct: 227 NLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRA 276
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 122/538 (22%), Positives = 220/538 (40%), Gaps = 36/538 (6%)
Query: 43 LRDSLSP-SLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQ 99
+RDS P ++ +I HH+ F S+ N SP +Y ++ L S +
Sbjct: 284 VRDSHRPDTITYNLIIEGHFRHHNKK-DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 342
Query: 100 INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI-C- 157
+L+++ + ++ VY +I + N A +F+ K ++ P++ C
Sbjct: 343 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFD--KMTKVNVLPDLYCY 400
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NSL+ L+ G ++ + K F +M RG+ + + I + +N L ++ R
Sbjct: 401 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQ--RM 458
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + VI + ++ + K +E+ + + D Y I+ G++
Sbjct: 459 LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 518
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--N 335
VL + K G P + Y I GL + K G + K +D +++ N
Sbjct: 519 EAAFRVLSEIEKNGSVPDVHVYSSLISGLC--KTADREKAFGILDEMSKKGVDPNIVCYN 576
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
ALI G S D A FN ++ KG VP T ++L CK +Y + A
Sbjct: 577 ALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLAT 636
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D Y+V+ + ++G L +A +I+EM +G +S +N+L++ C+ ++
Sbjct: 637 GITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQET 695
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEI---------------EGALR----LFHN 495
KL + G N T +IS SE G++ E A R LF +
Sbjct: 696 LKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMD 755
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
M+ +G P ++ C+E NL A + + V + S + +LCR+
Sbjct: 756 MINQGKIP-LDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRK 812
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 153/364 (42%), Gaps = 24/364 (6%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y +L+S S I + S K + + LD+ +Y +I +L N + AF V +E++
Sbjct: 470 YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIE 529
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
N + +SL++ L + A + DEMS +GV+ + + + I C++ +
Sbjct: 530 KNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDIS 589
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
++ + + + ++ V +I G CK + AF + +E+ PD Y +
Sbjct: 590 YARNVFNSILAK--GLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSV 647
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV--- 323
+ G + E+ + L ++ L + + + G ++ E +L VI+
Sbjct: 648 LTTGCSSAGDL-EQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRG 706
Query: 324 -----------------SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
+GK + + L S R F MI +G++P L
Sbjct: 707 LVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-LD 765
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
+ ++ ++ CK D+ + + V+ A SY +V LC G+L EA +++EM
Sbjct: 766 VVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEM 825
Query: 427 KRKG 430
++G
Sbjct: 826 DKRG 829
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 146/366 (39%), Gaps = 29/366 (7%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
I+ F M +GV +G+ I + + +L E+ K NGSV
Sbjct: 483 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEK------NGSVPD 536
Query: 230 VLI----IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
V + I G CK E+AF +LDE+ + P+ + Y + + G + V
Sbjct: 537 VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFN 596
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSI 344
G+ P Y I G I A L +++ T D V + L G S+
Sbjct: 597 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 656
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
D A+ M +G ++S+ +NL CKR K E +++ V+ + +
Sbjct: 657 DLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIE 715
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
++S L +G+L E + + E+++K + ++SL D++ K D
Sbjct: 716 NIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLF-----MDMINQGKIPLD----- 765
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
+ +I + G ++ AL L ++ K ++Y ++++ LC++ L A
Sbjct: 766 -------VVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEA 818
Query: 525 FEVFNK 530
+ +
Sbjct: 819 LNLLKE 824
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 382 DELVEVYK----VLSANDYFTDMESYNVMVSFLCTSGRLREA---------YGVIQEMKR 428
D LV+ YK V A + M + S C + L++ + V + M
Sbjct: 51 DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVG 110
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
G+ PDV Y++L+EA C+ AKK+ +M GC N TYN+LI+ G +E
Sbjct: 111 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 170
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
A +M + G+ PD TY +L+ GLC+
Sbjct: 171 AFGFKKDMEDYGLVPDGFTYGALINGLCK 199
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 200/449 (44%), Gaps = 40/449 (8%)
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAV 163
D ++ K +L++ +Y II + Q N KA ++ E++ D +I ++++
Sbjct: 3 DHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDG 62
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
G D L +F+ G+ S I +G I + AKLG+V L+ ++ E++ I
Sbjct: 63 YTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLY---AKLGKVSKALEVSKEMEHAGI 119
Query: 224 NGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV----- 277
++ ++I+GF K K AF + ++L KPD + Y + F MG +
Sbjct: 120 KHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVC 179
Query: 278 -----------------------FEREVVLKKK-------RKLGVAPRTNDYREFILGLI 307
F R+ +KK R G P + Y ILGL+
Sbjct: 180 TVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLV 239
Query: 308 VERRICEAKE-LGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
+R++ +A++ L E+ ++G + + G S D A +F + ++G +
Sbjct: 240 EKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVY 299
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T L K CK + + V K +SA + + YN+++ G + EA ++Q+M
Sbjct: 300 TYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQM 359
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
KR+G+ PD+ Y S + AC + ++ A K ++M + G N+KTY LI+ ++
Sbjct: 360 KREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLP 419
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGL 515
E AL F M G+ PD Y L+ L
Sbjct: 420 EKALSCFEEMKLSGLKPDRAVYHCLMTSL 448
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 139/312 (44%), Gaps = 2/312 (0%)
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
K ++S +N ++I II+ +C+ +++A ++ E+ Y + + + ++G
Sbjct: 10 KEKHSSLN-AIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGD 68
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ +V ++ ++ G+ P Y I ++ +A E+ + + + +
Sbjct: 69 EDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSM 128
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G + D +A F +I+ G P + +N+ C K D V K +
Sbjct: 129 LINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQR 188
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ ++ ++ G +++A V M+ G P V YN+L+ + + A+
Sbjct: 189 HKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAE 248
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
++ D+M +G S N TY ++ ++ +G+ A F + ++G+ D TY +LL+
Sbjct: 249 QILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKAC 308
Query: 516 CQETNLQAAFEV 527
C+ +Q+A V
Sbjct: 309 CKSGRMQSALAV 320
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 126/534 (23%), Positives = 225/534 (42%), Gaps = 35/534 (6%)
Query: 2 TMRPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLL 61
T P +L ++IS + S KW E + L L P V ++ +
Sbjct: 43 TTNPFPELVSKISTILSSP--------KW----EHSSELCHLSPKLKPHHVVNILQTHKN 90
Query: 62 THHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV 121
T L FF W S++ F H + S+L L R D V
Sbjct: 91 TDS--VLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHV--------------- 133
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDE 179
R ++ + + K + F + D G +C+ +LL L +D A M+ +
Sbjct: 134 -RILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIK 192
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M + G+ S + F I C+ ++ + ++ + R ++ N LI+ G C+
Sbjct: 193 MLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIF-RYDAYPNAFTYTSLIL-GHCRN 250
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
++ AF + D + C P+ + Y + G + E +L++ + G+ P Y
Sbjct: 251 HNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTY 310
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIE 358
++ L EA EL + + ALI +S AI ++ M+
Sbjct: 311 TIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLA 370
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
G VPT T + L LC + + ++K + ++ ++YN ++ C G +++
Sbjct: 371 DGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQK 430
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A + +M + G P+V YN+L+ C++ L A +L + M +G + TY LIS
Sbjct: 431 AMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELIS 490
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
FS G++E A LF+ M+E G++P+ TYT++++G + A +F K V
Sbjct: 491 GFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMV 544
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 173/386 (44%), Gaps = 7/386 (1%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D A MFD M G + +++ + I C +L + + ML+E+ ++ I +V
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKG---IEPTVYT 309
Query: 230 VLI-IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
I + C EA ++L +++ R C P+ + + G FE + L K
Sbjct: 310 YTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGK-FEIAIGLYHKM 368
Query: 289 KL-GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DP 346
G+ P T Y I L VE R A + + ++S N +I + D
Sbjct: 369 LADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDI 428
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+ A+V F+ M++ G P + T + L CK+ + + + +++ N D +Y +
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+S G+L A + M G+ P+ Y ++++ + A L+ +M SG
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ +TYN++IS FS+ I A M+++G+ P+ TYTS ++GLC+ AF+
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+F++ + S+ + LC+
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQ 634
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 206/476 (43%), Gaps = 29/476 (6%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
++ +++ LS + + ++ + + + Y +I L + AF++F +
Sbjct: 344 TFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWM 403
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + N ++ G I A+ +FD+M G + I + I+ +C+ L
Sbjct: 404 LSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNL 463
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ +L+ ++ N + + +I GF +G ++E A + + P+ + Y
Sbjct: 464 NNAMRLLEIMKG--NGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYT 521
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVS 324
+ + + + V + + K + G P + Y I G I EA+ G+++
Sbjct: 522 AIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQ 581
Query: 325 GKFTIDDDVLNALIGSVSSIDP-----RSAIVF--FNFMIEKGRVPTLSTLSNLSKNLCK 377
G +L +I S ID R+ + F F+ M ++ P L T S+L LC+
Sbjct: 582 G-------LLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ 634
Query: 378 RNKSDELVEVYKVLSANDYF---TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
++++ E+Y +L+ ++ ++++Y +V LC GR EA ++ M++KGL P
Sbjct: 635 EGRAED-AEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPS 693
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
Y +L+ C+ + A ++ M G +L Y LI + IE A +F
Sbjct: 694 EEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQ 753
Query: 495 NMLEKGVAPDATTYTSLLEGLCQET------NLQAAFEVFNKSVNHD--VMLARSI 542
MLEK D +T LL+GL +E L E N ++N VMLAR +
Sbjct: 754 TMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL 809
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 111/515 (21%), Positives = 196/515 (38%), Gaps = 77/515 (14%)
Query: 118 DSSVYRFIIPSLIQGK----NTQKAFSVFNE-VKFNCEDIGPEICNSLLAVLASDGYIDN 172
D+ F SLI G N AF++F+ VK C D ++L+ L S+G ++
Sbjct: 232 DAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGC-DPNSVTYSTLINGLCSEGRLEE 290
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR-------------- 218
A+ M +EM +G+E + + + + C+ + + +L +++KR
Sbjct: 291 AMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALIS 350
Query: 219 -------------------ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ ++ +V +I+ C R E AF + + P
Sbjct: 351 GLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLP 410
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
Y + + F LMG + + V+ K K G +P Y I G + + A L
Sbjct: 411 STQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLL 470
Query: 320 EVIVSGKFTIDDDVLNALIGSVS------------------SIDPR----SAIV--FFNF 355
E++ D LI S I P +AI+ +FN
Sbjct: 471 EIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNL 530
Query: 356 ------------MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
M+E G +P+ T + + K N E + ++ +Y
Sbjct: 531 AKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITY 590
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK--KLWDQM 461
+ LC +GR A+ + EM+++ P++ Y+SL+ C+E A+ L ++
Sbjct: 591 TSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARL 650
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
GC N+ TY L+ G A +L +M +KG+ P Y +LL G C+ +
Sbjct: 651 THYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKV 710
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
++A +F L S + +LC+ I
Sbjct: 711 ESALNIFYSMDTLGFQLHLSDYKALICALCKENFI 745
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 119/251 (47%), Gaps = 21/251 (8%)
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMI----EKGRV-------------- 362
+I GKF + D + I ++S R +++ FN MI +KGRV
Sbjct: 174 LIQLGKFDMVDLARDMYIKMLNS-GIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYD 232
Query: 363 --PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P T ++L C+ + D ++ + + + +Y+ +++ LC+ GRL EA
Sbjct: 233 AYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAM 292
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+++EM +KG++P V Y + + C A +L +M GC N++T+ LIS
Sbjct: 293 DMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGL 352
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
S G+ E A+ L+H ML G+ P TY +L+ LC E + AF +F ++H + +
Sbjct: 353 SRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPST 412
Query: 541 SILSTFMISLC 551
+ + C
Sbjct: 413 QTYNEIIKCFC 423
>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 806
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/510 (22%), Positives = 221/510 (43%), Gaps = 9/510 (1%)
Query: 30 WTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHS 89
W P E + L LR SL PS V V+ +AL FF WA +Q + H P+ Y+S
Sbjct: 157 WNPKHEGQMRNL-LR-SLKPSQVCAVLRSQ--DDERVALKFFYWADRQWRYRHDPMVYYS 212
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
+L+ LS ++ VL +K I + ++ S + + A V ++
Sbjct: 213 MLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAG 272
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ ICN+ + V ++ AL+ + M G+ + + + I +C+ ++ + +
Sbjct: 273 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 332
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RIRECKPDFIAYRIVA 268
+L+++ + + V I+ CK KR+ E ++ ++ + PD + Y +
Sbjct: 333 ELLEDMHSK--GCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLI 390
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKF 327
E LK ++ G Y + L E R+ EAK+L E++ G
Sbjct: 391 HMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHC 450
Query: 328 TIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
D A++ + + A M G P + + L +C+ KS E E
Sbjct: 451 PPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEARE 510
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
+ + + + + +Y+V++ L G+L EA V++EM KG P N L+++ C
Sbjct: 511 MMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLC 570
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
R+ A+K ++ GC+ N+ + +I F + E++ AL + +M D
Sbjct: 571 RDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVF 630
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
TYT+L++ L ++ + A E+ K ++ +
Sbjct: 631 TYTTLVDTLGKKGRIAEATELMKKMLHKGI 660
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 174/391 (44%), Gaps = 10/391 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ +L + D AL + +G +G+ + C+ ++ + +++E+
Sbjct: 387 NTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLS 446
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + + V +++GFC+ V++A K+L + KP+ ++Y + G
Sbjct: 447 KGHCPPD-VVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKS 505
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E ++ + +P + Y + GL E ++ EA ++ +V F +N L
Sbjct: 506 LEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLL 565
Query: 338 IGSVSSIDPRS--AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
+ S+ D R+ A F + KG + + + C+ ++ D + V + +
Sbjct: 566 LQSLCR-DGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLIN 624
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D+ +Y +V L GR+ EA ++++M KG+DP Y +++ C+ +
Sbjct: 625 KHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLV 684
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ ++M + + YN +I K +G++E A L +L DA T +L+EG
Sbjct: 685 AILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGY 742
Query: 516 CQETNLQAAFEV----FNKSVNHDVMLARSI 542
++ +A++V FN+++ DV + +
Sbjct: 743 LKKGVPLSAYKVACRMFNRNLIPDVKMCEKL 773
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 90/436 (20%), Positives = 178/436 (40%), Gaps = 31/436 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++++ L+ + LK + +D Y I+ +L + +A + NE
Sbjct: 384 VTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINE 443
Query: 145 V--KFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+ K +C P++ V G +D A K+ M G + +T+ + + C
Sbjct: 444 MLSKGHCP---PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMC 500
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
K + M++ E+ S+ +I+HG + ++ EA V+ E+ ++ P
Sbjct: 501 RTGKSLEAREMMN--MSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPG 558
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ ++ + G E +++ G A ++ I G C+ EL
Sbjct: 559 PVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGF------CQNDELDA 612
Query: 321 V--IVSGKFTIDD--DV-----LNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
++ + I+ DV L +G I A M+ KG PT T +
Sbjct: 613 ALSVLDDMYLINKHADVFTYTTLVDTLGKKGRI--AEATELMKKMLHKGIDPTPVTYRTV 670
Query: 372 SKNLCKRNKSDELVEVY-KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
C+ K D+LV + K++S T YN ++ LC G+L EA ++ ++ R
Sbjct: 671 IHRYCQMGKVDDLVAILEKMISRQKCRT---IYNQVIEKLCVLGKLEEADTLLGKVLRTA 727
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
D +LME ++ + A K+ +MF ++K L + G+++ A
Sbjct: 728 SRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEAD 787
Query: 491 RLFHNMLEKG-VAPDA 505
+L ++E+G ++P +
Sbjct: 788 KLMLRLVERGHISPQS 803
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 94/240 (39%), Gaps = 20/240 (8%)
Query: 324 SGKFTIDDDV--------LNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+G+F +++D + LIG SS +P+ N L +L
Sbjct: 129 AGRFDVEEDESRHPLVREVGRLIGLRSSWNPKHEGQMRNL---------LRSLKPSQVCA 179
Query: 376 CKRNKSDELVEV---YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
R++ DE V + Y Y D Y M+ L + + + V+ MKR+G+
Sbjct: 180 VLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIY 239
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
++ +M + R LR A K+ M +G NL N I F +E ALR
Sbjct: 240 RTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRF 299
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M G+ P+ TY ++ G C ++ A E+ + + + T M LC+
Sbjct: 300 LERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCK 359
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 179/392 (45%), Gaps = 19/392 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+LL L + + AL +F +M V + F + C ++ + +++LD R
Sbjct: 54 NTLLHGLCVEDRVSEALDLFHQMCKPNV----VTFTTLMNGLCREGRVVEAVALLD--RM 107
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR-IRECKPDFIAYRIVAEEFKLMGS 276
E+ + + I+ G CK A +L ++ + KPD + Y + + G
Sbjct: 108 VEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGR 167
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ + + + + G+ P Y I G + EA+ L + ++ K + D +
Sbjct: 168 HTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSG 227
Query: 337 LIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA-- 393
LI + V D SA MI G P + T + L LC K + +E++K +
Sbjct: 228 LINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSM 287
Query: 394 ---------NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
N D+++YN+++S L G+ EA + +EM +G+ PD Y+S++
Sbjct: 288 MDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMING 347
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C++ L A +++D M + S N+ T+N LI+ + + G ++ L LF M +G+ +
Sbjct: 348 LCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVAN 407
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
A TY +L+ G + N+ + ++F + ++ V
Sbjct: 408 AITYITLIRGFRKVGNINGSLDIFQEMISSGV 439
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/490 (21%), Positives = 202/490 (41%), Gaps = 73/490 (14%)
Query: 57 NPYLLTHHSLALGFF--NWASQQPNFTH-----SPLSYHSILKSLSLSRQINAIDSVLKQ 109
+P L+T ++L G + S+ + H + +++ +++ L ++ ++L +
Sbjct: 47 HPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDR 106
Query: 110 VKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASD 167
+ + + + Y I+ + + +T A ++ +++ I P++ ++++ L D
Sbjct: 107 MVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME-ELSHIKPDVVIYSAIIDGLWKD 165
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G +A +F EM +G+ + + I FC + K
Sbjct: 166 GRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKW---------------------- 203
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
EA ++L E+ +R+ PD + + + G + + +L++
Sbjct: 204 ---------------SEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM 248
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR 347
GV P + GL C++ +L + + ++ A+ S+ ID
Sbjct: 249 ISSGVCPNVVTCNTLLDGL------CDSGKLKDAL---------EMFKAMQKSMMDIDAT 293
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A FN G P + T + L L K E E+Y+ + D +Y+ M+
Sbjct: 294 HA---FN-----GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMI 345
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+ LC RL EA + M K P++ +N+L+ C+ ++ +L+ +M G
Sbjct: 346 NGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIV 405
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA--- 524
N TY LI F +VG I G+L +F M+ GV PD T ++L GL + L+ A
Sbjct: 406 ANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAM 465
Query: 525 FEVFNKSVNH 534
E S++H
Sbjct: 466 LEELQMSMDH 475
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 155/375 (41%), Gaps = 54/375 (14%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLD 250
F + I FC +KL LS ++ K + +++ ++HG C RV EA +
Sbjct: 18 FNILIKCFCSCSKLPFALSTFGKLTKLG---FHPTLVTFNTLLHGLCVEDRVSEALDLFH 74
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
++ CKP+ + + + G V E +L + + G+ P Y
Sbjct: 75 QM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG---------- 120
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRV-PTLSTLS 369
IV G + D V SA+ M E + P + S
Sbjct: 121 ----------TIVDGMCKMGDTV--------------SALNLLRKMEELSHIKPDVVIYS 156
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
+ L K + + ++ + F D+ +Y+ M++ C+SG+ EA ++QEM +
Sbjct: 157 AIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVR 216
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
+ PDV ++ L+ A +E L A+ L +M +SG N+ T N L+ + G+++ A
Sbjct: 217 KISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDA 276
Query: 490 LRLFHNMLE-----------KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
L +F M + GV PD TY L+ GL E A E++ + + ++
Sbjct: 277 LEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 336
Query: 539 ARSILSTFMISLCRR 553
S+ + LC++
Sbjct: 337 DTVTYSSMINGLCKQ 351
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D+ S+N+++ C+ +L A ++ + G P + +N+L+ C ED + A L+
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
QM C N+ T+ L++ G + A+ L M+E G+ P+ TY ++++G+C+
Sbjct: 74 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 519 TNLQAAFEVFNK-----SVNHDVMLARSIL 543
+ +A + K + DV++ +I+
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAII 159
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 184/402 (45%), Gaps = 10/402 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++A G +D A ++ EM VE + I C + L++LDE+ +
Sbjct: 4 NAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR 60
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R + V +++ CK ++A K+LDE+R + C PD + Y +V G V
Sbjct: 61 RR--CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSG--KFTIDDDVL 334
+ LK G P T Y + GL R +A+EL GE+ G + ++L
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+ + ++P A+ + + G P + + L CK+ K D+ + ++ +
Sbjct: 179 ISFLCRKGLVEP--ALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 236
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ D+ SYN +++ LC SG + A ++ ++K KG P + YN++++ + + A
Sbjct: 237 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 296
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+L ++M + G ++ TY+ + + IE A+R F + + G+ P+ Y +++ G
Sbjct: 297 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 356
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
LC+ +A ++F + + M S + + L LI
Sbjct: 357 LCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLI 398
>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
Length = 846
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 199/454 (43%), Gaps = 36/454 (7%)
Query: 135 TQKAFSVFNEV-KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
++ AF +F E+ + CE P + N L+ VL +G + A ++FDEM+ G++ +TI
Sbjct: 270 SRDAFKLFEEMHRSGCE---PTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTIT 326
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKR---------------------------ENSMIN 224
F V I + + ++ Q + E++ R ++ M
Sbjct: 327 FNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFG 386
Query: 225 GSVIAV---LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
++A +++ C R+++A+++L + + + + G E
Sbjct: 387 SHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAF 446
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
+ + KLG+AP ++ + I+GL + R+ EA+ L E +VS + + L S
Sbjct: 447 ELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDASF 506
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ A+ ++ M + G P S LC+ + +E + + ++A +
Sbjct: 507 REGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNF 566
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN ++S LC +G + EA + Q M++ GL PD+ N L++ CRE L L M
Sbjct: 567 TYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDM 626
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
++G + + TYN +I+ + ++ A+ + ML G PD TY + LC L
Sbjct: 627 CSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHML 686
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
A +V ++ V +T M +C VL
Sbjct: 687 NQAGKVLDELVAMGCPPDSVTYNTLMDGICSDVL 720
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 163/426 (38%), Gaps = 77/426 (18%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G + A +F+EM+ RG S F I FC L +V S L + E ++
Sbjct: 198 GEVHAAWNVFEEMAARGPRPSLATFNAMILGFCHRG-LVRVASGLLGIMG-EFGIVPNVC 255
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
++I G C +AFK+ +E+ C+P + Y I+ + G + E + +
Sbjct: 256 SYNILIKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEM 315
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEA-------KELGEVIVSGKFTI----------- 329
++G+ T + I G R+ +A K G V S F I
Sbjct: 316 AQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHA 375
Query: 330 -----DDDVLNALIGSVSSIDPRSAIV--------------FFNFMIEKGRVPTLSTLSN 370
D D + GS D +V IE+G +++ +
Sbjct: 376 AQLVHDHD----MFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNA 431
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK- 429
L K +E E+Y++++ ++N ++ LC GRL EA +++ M K
Sbjct: 432 LIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKG 491
Query: 430 ---------------------------------GLDPDVSFYNSLMEACCREDLLRPAKK 456
GL PD +++ + CR D + A +
Sbjct: 492 YCLSTSFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQ 551
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ +M A G N TYN +IS G + AL+L NM + G+ PD T L++GLC
Sbjct: 552 AFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLC 611
Query: 517 QETNLQ 522
+E L+
Sbjct: 612 REGKLE 617
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 138/356 (38%), Gaps = 15/356 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+A + +G + A +++ M+ G+ S+ F I C +L + +L+ +
Sbjct: 430 NALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVS 489
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + + + + F +G V A K D++ +PDFIA+ + V
Sbjct: 490 KGYCL--STSFTICLDASFREGNAVC-ALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYV 546
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E + G+ P Y I L + EA +L + + D N L
Sbjct: 547 NEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNIL 606
Query: 338 I------GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
I G + +D M G P T + + C+ + + +
Sbjct: 607 IDGLCREGKLEMVDN-----LLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKM 661
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
A D+ +YN+ + LC++ L +A V+ E+ G PD YN+LM+ C D+L
Sbjct: 662 LAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGIC-SDVL 720
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
A L ++ N T N+ +S F + G + AL + E D T
Sbjct: 721 DRAMILTGRLIKMAFQPNTITLNVFLSHFCKQGFGKRALMWAEKLREDSFVFDDAT 776
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%)
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
V++ ++A + ++N M+ C G +R A G++ M G+ P+V YN L++ C
Sbjct: 206 VFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHC 265
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
R A KL+++M SGC + TYNIL+ G + A RLF M + G+ +
Sbjct: 266 VFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTI 325
Query: 507 TYTSLLEGLCQETNLQAAFEVFNK 530
T+ L++G + + A + +
Sbjct: 326 TFNVLIDGYAKTGRMDQACAAYRE 349
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 3/193 (1%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
R A M E G VP + + + L K C S + ++++ + + + +YN++
Sbjct: 236 RVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNIL 295
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
V LC GR+ EA + EM + G+ + +N L++ + + A + +M A G
Sbjct: 296 VDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGL 355
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ T+NI+ + + G A +L H+ G A L+ LC + L A+E
Sbjct: 356 VPDSCTFNIIAAGAYKFGH---AAQLVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWE 412
Query: 527 VFNKSVNHDVMLA 539
+ ++ L+
Sbjct: 413 LLRGAIEQGAPLS 425
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%)
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+G EA V+ ++R G P +S +L+ R + A ++++M A G +L
Sbjct: 161 AAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAARGPRPSLA 220
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
T+N +I F G + A L M E G+ P+ +Y L++G C + AF++F +
Sbjct: 221 TFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDAFKLFEE 279
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 129/532 (24%), Positives = 221/532 (41%), Gaps = 49/532 (9%)
Query: 60 LLTHHSLALGFFNWAS----QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKI 115
L++ L LGF + + + F + Y +I+ +L + A + + ++
Sbjct: 167 LMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGF 226
Query: 116 TLDSSVYRFIIPSLIQGKNTQKAFSVF-----------NEVKFN------CE-------- 150
LDS + ++ +G N + A VF N V ++ CE
Sbjct: 227 LLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAF 286
Query: 151 ----DIGPEICNS-------LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+G + C L+ L G ID A +FDEM RG + + + V I
Sbjct: 287 GLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGL 346
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECK 258
C + K+ + + RK I SVI +I+G+CK RV AF++L + R CK
Sbjct: 347 CRDGKIEEANGV---CRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACK 403
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
P+ + + E +G ++ +LK+ G++P Y I GL E + A +L
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKL 463
Query: 319 GEVIVSGKFTIDDDVLNALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ S D A+I + D SA F M+ KG T + L +
Sbjct: 464 LTSMNSFDLEPDCLTFTAIINAFCKQGKADVASA--FLGLMLRKGISLDEVTGTTLIDGV 521
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C K+ + + + + L T S NV++ L +L+E ++ ++ + GL P V
Sbjct: 522 CNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSV 581
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y +L++ R + + ++ + M SGC N+ Y I+I+ + G +E A +L
Sbjct: 582 VTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSA 641
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
M + GV+P+ TYT +++G L A E V L I S+ +
Sbjct: 642 MQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 110/531 (20%), Positives = 215/531 (40%), Gaps = 69/531 (12%)
Query: 31 TPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSI 90
+P E+ L +SP++ ++VI+ + + + + FF W + ++ P + +
Sbjct: 51 SPNWEKNSSLKSLVSHMSPNVASQVIS-LQRSDNDICVRFFMWVCKHSSYCFDPTQKNQL 109
Query: 91 LKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF---IIPSLIQG-----KNTQKAFSVF 142
LK + + S ++R +I +LI+ K K S F
Sbjct: 110 LK----------------------LIVSSGLFRVAHDVIVALIRECSRCEKEMLKLISCF 147
Query: 143 NEVK-FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+E++ + + +SLL LA A + M G I + + C+
Sbjct: 148 DELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCK 207
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RIRECKPD 260
N + ++ K +++ ++ L++ GFC+G + +A KV D + R C P+
Sbjct: 208 NGYTEAAEMFMCKILK-VGFLLDSHIVTSLLL-GFCRGLNLRDALKVFDLMSREGTCAPN 265
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
++Y I+ +G + E + + + G P T Y I + +C+
Sbjct: 266 SVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI------KALCD------ 313
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ ID A F+ MI +G P + T + L LC+ K
Sbjct: 314 -----RGLID-----------------KAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGK 351
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+E V + + + F + +YN +++ C GR+ A+ ++ M+++ P+V +N
Sbjct: 352 IEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
LME CR A L +M +G S ++ +YN+LI G + A +L +M
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFD 471
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+ PD T+T+++ C++ A + + L +T + +C
Sbjct: 472 LEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVC 522
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/304 (18%), Positives = 120/304 (39%), Gaps = 46/304 (15%)
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ KL + L+ML ++ K ++ V ++ G + + +F++L+ +++ C P+
Sbjct: 558 KGCKLKEELAMLGKINKL--GLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPN 615
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
Y I+ G V E E +L + GV+P Y + G + ++ A E
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVR 675
Query: 321 VIVSGKFTIDDDVLNALI-------GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+V + ++D + ++L+ + DP K + + L +
Sbjct: 676 AMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECI---------KELISVVEQLGGSTS 726
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
LC +V+ LC GR E+ G++Q + + G+
Sbjct: 727 GLCI---------------------------FLVTRLCKEGRTDESNGLVQTILKSGVFL 759
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+ + + +ME+ C + +L + SG + K++ ++I + G+ E A L
Sbjct: 760 EKAI-DIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELV 818
Query: 494 HNML 497
+L
Sbjct: 819 MELL 822
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/528 (21%), Positives = 232/528 (43%), Gaps = 61/528 (11%)
Query: 30 WTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHS 89
W P LE +L LG + P LV V+ L + A+ +F WA +Q H P +Y+S
Sbjct: 75 WGPTLENSLSALG--EKPLPELVIGVLKR--LKDANTAVNYFQWAEKQTEKVHCPEAYNS 130
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK--- 146
+L ++ + + + ++ +L+++ ++ S++ ++ + ++ + ++AF + ++
Sbjct: 131 LLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFK 190
Query: 147 ----FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
F+ I L+ L+ D L +F +M G E + F I F
Sbjct: 191 FRPAFSAYTI-------LIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFARE 243
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
++ LS+LDE++ NS+ V+ + I F K +V+ ++K E++ PD +
Sbjct: 244 GRVDAALSLLDEMKS--NSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDV 301
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + +GV + N R+ EA EL E +
Sbjct: 302 TYTSM----------------------IGVLCKAN-------------RLDEAVELFEQL 326
Query: 323 VSGKFTIDDDVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+ N +I GS D A KG +P++ + + L K+
Sbjct: 327 EQNRKVPCAYAYNTMIMGYGSAGKFD--EAYGLLERQKAKGSIPSVIAYNCILTCLGKKR 384
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ +E + +++ + D ++ +YN+++ LC G+L A + +M+R GL P+V N
Sbjct: 385 RVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVN 443
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+++ C+ L A +++ M C+ N T++ LI + G ++ A L+ ML+
Sbjct: 444 IMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDC 503
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
G P A YTSL+ + + +++ + V+ ++++T+M
Sbjct: 504 GHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYM 551
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/470 (21%), Positives = 205/470 (43%), Gaps = 6/470 (1%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y S++ L + +++ + +Q++ N+ + Y +I +A+ +
Sbjct: 301 VTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLER 360
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
K N +L L ++ AL++F+EM V + + + I C K
Sbjct: 361 QKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVP-NVPTYNILIDMLCREGK 419
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
L L + D++ E + + +V+ V ++I CK +++EEA + + + + C P+ +
Sbjct: 420 LNAALEIRDDM---ERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVT 476
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+ + + G V + + +K G P Y I R + ++ + +V
Sbjct: 477 FSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMV 536
Query: 324 SGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+ D ++N + V + + F + G +P + S L L K ++
Sbjct: 537 HTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLAN 596
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E E++ + D +YN ++ C SG++ +AY +++EMK KG P V Y S++
Sbjct: 597 ETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVI 656
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+ + D L A L+++ ++G N+ Y+ LI F +VG I+ A + +++KG+
Sbjct: 657 DGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLT 716
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
P+ T+ LL+ L + + A F + + S + LCR
Sbjct: 717 PNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCR 766
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/481 (21%), Positives = 201/481 (41%), Gaps = 39/481 (8%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y++++ + + + +L++ K Y I+ L + + ++A +F E+
Sbjct: 337 AYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM 396
Query: 146 KFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
K D P + N L+ +L +G ++ AL++ D+M G+ + + + I + C+
Sbjct: 397 K---RDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQ 453
Query: 204 KLGQVLSMLDEVRKR---------------------------------ENSMINGSVIAV 230
KL + S+ + + + + + G+++
Sbjct: 454 KLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYT 513
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I F K R E+ K+ E+ C PD + G + + ++
Sbjct: 514 SLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAH 573
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G P Y I GL+ E EL + +D NA+I G S A
Sbjct: 574 GFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKA 633
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
M KG PT+ T ++ L K ++ DE +++ +N ++ Y+ ++
Sbjct: 634 YQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDG 693
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
GR+ EAY +++E+ +KGL P+V +N L++A + + + A + M C N
Sbjct: 694 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPN 753
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
TY+ILI+ V + A + M + G+ P+ TYT+++ GL + N+ A +F+
Sbjct: 754 QITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFS 813
Query: 530 K 530
+
Sbjct: 814 R 814
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 92/444 (20%), Positives = 190/444 (42%), Gaps = 9/444 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
L+ + ++ L ++++ S+ + + T ++ + +I L + A+S++ +
Sbjct: 440 LTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEK 499
Query: 145 VKFNCEDI-GPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ +C + G + SL+ G ++ K++ EM H G ++ +
Sbjct: 500 M-LDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAG 558
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ + ++ E+ + I + ++IHG K E +++ ++ + C D A
Sbjct: 559 ETEKGRALFREINA--HGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHA 616
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y V + F G V + +L++ + G P Y I GL R+ EA L E
Sbjct: 617 YNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 676
Query: 324 SGKFTIDDDVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
S ++ V ++LI G V ID A + +++KG P + T + L L K +
Sbjct: 677 SNGIKLNVVVYSSLIDGFGKVGRID--EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 734
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+E + ++ + + +Y+++++ LC + +A+ QEM++ GL P+ Y +
Sbjct: 735 INEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTT 794
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
++ + + A L+ + A+G + +YN +I S + A LF KG
Sbjct: 795 MISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKG 854
Query: 501 VAPDATTYTSLLEGLCQETNLQAA 524
T LL+ L + L+ A
Sbjct: 855 CNIHTKTCVVLLDALHKAECLEQA 878
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/501 (23%), Positives = 210/501 (41%), Gaps = 53/501 (10%)
Query: 51 LVARVINPYLLTHHSLALGFFNWASQQPNFT-------HSP---LSYHSILKSLSLSRQI 100
+V R P ++ L GFFN + H +Y++++ + ++
Sbjct: 103 MVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHGKPDVFAYNAVISGFCKADRV 162
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEICNS 159
+ VL ++K D Y +I + A V +++ K NC+ P +
Sbjct: 163 DHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCK---PTVITY 219
Query: 160 LLAVLAS--DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
+ + A+ G ID A+K+ DEM RG+ + V + C+ L + L + K
Sbjct: 220 TILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISK 279
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
N + G +++ + E K++ ++ ++ C+P+ I Y + G +
Sbjct: 280 --NGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKI 337
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E + VLK ++ +AP Y I L E GK +
Sbjct: 338 DEAKNVLKVMKEKALAPDGYSYDPLISALCRE---------------GKVDL-------- 374
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
AI F + MI G +P + + +++ +LCK +DE + +++ L
Sbjct: 375 -----------AIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCP 423
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
+ SYN + L +SG A G+I EM G+DPD YNSL+ CR+ L+ A +L
Sbjct: 424 PNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIEL 483
Query: 458 WDQMFAS-GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
MF S C + +YN ++ +V I A+ + M+ +G P+ TTYT L++G+
Sbjct: 484 LVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIG 543
Query: 517 QETNLQAAFEVFNKSVNHDVM 537
A E+ N VN D +
Sbjct: 544 FAGWRYDAMELANLLVNMDAI 564
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 139/321 (43%), Gaps = 10/321 (3%)
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
CK + +E+ L + R KPD I + + F M + + V++ K G P
Sbjct: 88 CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDV 146
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNF 355
Y I G R+ A ++ + + F D N LIG+ A+ +
Sbjct: 147 FAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQ 206
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
+++ PT+ T + L + + DE +++ + + D +YNV+V+ +C G
Sbjct: 207 LLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGM 266
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L A+ + + + G VS YN L+ E +KL M GC N TY+
Sbjct: 267 LDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYST 326
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH- 534
LI+ G+I+ A + M EK +APD +Y L+ LC+E + A E + ++
Sbjct: 327 LITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGG 386
Query: 535 ---DVMLARSILSTFMISLCR 552
D++ SIL+ SLC+
Sbjct: 387 HLPDILSYNSILA----SLCK 403
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 91/191 (47%), Gaps = 4/191 (2%)
Query: 369 SNLSKNL---CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
+N K L CK K DE + + + Y D+ ++ ++ +A V++
Sbjct: 78 TNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEI 137
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
+++ G PDV YN+++ C+ D + A K+ D+M G ++ TYNILI F G
Sbjct: 138 LEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
++ ALR+ +L+ P TYT L+E + + A ++ ++ ++ + R +
Sbjct: 197 LDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNV 256
Query: 546 FMISLCRRVLI 556
+ +C+ ++
Sbjct: 257 VVNGMCKEGML 267
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 126/534 (23%), Positives = 225/534 (42%), Gaps = 35/534 (6%)
Query: 2 TMRPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLL 61
T P +L ++IS + S KW E + L L P V ++ +
Sbjct: 43 TTNPFPELVSKISTILSSP--------KW----EHSSELCHLSPKLKPHHVVNILQTHKN 90
Query: 62 THHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV 121
T L FF W S++ F H + S+L L R D V
Sbjct: 91 TDS--VLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHV--------------- 133
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDE 179
R ++ + + K + F + D G +C+ +LL L +D A M+ +
Sbjct: 134 -RILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIK 192
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M + G+ S + F I C+ ++ + ++ + R ++ N LI+ G C+
Sbjct: 193 MLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIF-RYDAYPNAFTYTSLIL-GHCRN 250
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
++ AF + D + C P+ + Y + G + E +L++ + G+ P Y
Sbjct: 251 HNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTY 310
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIE 358
++ L EA EL + + ALI +S AI ++ M+
Sbjct: 311 TIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLA 370
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
G VPT T + L LC + + ++K + ++ ++YN ++ C G +++
Sbjct: 371 DGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQK 430
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A + +M + G P+V YN+L+ C++ L A +L + M +G + TY LIS
Sbjct: 431 AMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELIS 490
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
FS G++E A LF+ M+E G++P+ TYT++++G + A +F K V
Sbjct: 491 GFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMV 544
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 173/386 (44%), Gaps = 7/386 (1%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D A MFD M G + +++ + I C +L + + ML+E+ ++ I +V
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKG---IEPTVYT 309
Query: 230 VLI-IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
I + C EA ++L +++ R C P+ + + G FE + L K
Sbjct: 310 YTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGK-FEIAIGLYHKM 368
Query: 289 KL-GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DP 346
G+ P T Y I L VE R A + + ++S N +I + D
Sbjct: 369 LADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDI 428
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+ A+V F+ M++ G P + T + L CK+ + + + +++ N D +Y +
Sbjct: 429 QKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTEL 488
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+S G+L A + M G+ P+ Y ++++ + A L+ +M SG
Sbjct: 489 ISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGN 548
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ +TYN++IS FS+ I A M+++G+ P+ TYTS ++GLC+ AF+
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+F++ + S+ + LC+
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQ 634
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 206/476 (43%), Gaps = 29/476 (6%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
++ +++ LS + + ++ + + + Y +I L + AF++F +
Sbjct: 344 TFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWM 403
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + N ++ G I A+ +FD+M G + I + I+ +C+ L
Sbjct: 404 LSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNL 463
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ +L+ ++ N + + +I GF +G ++E A + + P+ + Y
Sbjct: 464 NNAMRLLEIMKG--NGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYT 521
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVS 324
+ + + + V + + K + G P + Y I G I EA+ G+++
Sbjct: 522 AIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQ 581
Query: 325 GKFTIDDDVLNALIGSVSSIDP-----RSAIVF--FNFMIEKGRVPTLSTLSNLSKNLCK 377
G +L +I S ID R+ + F F+ M ++ P L T S+L LC+
Sbjct: 582 G-------LLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ 634
Query: 378 RNKSDELVEVYKVLSANDYF---TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
++++ E+Y +L+ ++ ++++Y +V LC GR EA ++ M++KGL P
Sbjct: 635 EGRAED-AEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPS 693
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
Y +L+ C+ + A ++ M G +L Y LI + IE A +F
Sbjct: 694 EEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQ 753
Query: 495 NMLEKGVAPDATTYTSLLEGLCQET------NLQAAFEVFNKSVNHD--VMLARSI 542
MLEK D +T LL+GL +E L E N ++N VMLAR +
Sbjct: 754 TMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL 809
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 111/515 (21%), Positives = 196/515 (38%), Gaps = 77/515 (14%)
Query: 118 DSSVYRFIIPSLIQGK----NTQKAFSVFNE-VKFNCEDIGPEICNSLLAVLASDGYIDN 172
D+ F SLI G N AF++F+ VK C D ++L+ L S+G ++
Sbjct: 232 DAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGC-DPNSVTYSTLINGLCSEGRLEE 290
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR-------------- 218
A+ M +EM +G+E + + + + C+ + + +L +++KR
Sbjct: 291 AMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALIS 350
Query: 219 -------------------ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ ++ +V +I+ C R E AF + + P
Sbjct: 351 GLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLP 410
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
Y + + F LMG + + V+ K K G +P Y I G + + A L
Sbjct: 411 STQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLL 470
Query: 320 EVIVSGKFTIDDDVLNALIGSVS------------------SIDPR----SAIV--FFNF 355
E++ D LI S I P +AI+ +FN
Sbjct: 471 EIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNL 530
Query: 356 ------------MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
M+E G +P+ T + + K N E + ++ +Y
Sbjct: 531 AKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITY 590
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK--KLWDQM 461
+ LC +GR A+ + EM+++ P++ Y+SL+ C+E A+ L ++
Sbjct: 591 TSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARL 650
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
GC N+ TY L+ G A +L +M +KG+ P Y +LL G C+ +
Sbjct: 651 THYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKV 710
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
++A +F L S + +LC+ I
Sbjct: 711 ESALNIFYSMDTLGFQLHLSDYKALICALCKENFI 745
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 119/251 (47%), Gaps = 21/251 (8%)
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMI----EKGRV-------------- 362
+I GKF + D + I ++S R +++ FN MI +KGRV
Sbjct: 174 LIQLGKFDMVDLARDMYIKMLNS-GIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYD 232
Query: 363 --PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P T ++L C+ + D ++ + + + +Y+ +++ LC+ GRL EA
Sbjct: 233 AYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAM 292
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+++EM +KG++P V Y + + C A +L +M GC N++T+ LIS
Sbjct: 293 DMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGL 352
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
S G+ E A+ L+H ML G+ P TY +L+ LC E + AF +F ++H + +
Sbjct: 353 SRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPST 412
Query: 541 SILSTFMISLC 551
+ + C
Sbjct: 413 QTYNEIIKCFC 423
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/501 (21%), Positives = 205/501 (40%), Gaps = 77/501 (15%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
V+ ++ + +Q + ++ F +K + CNSLL L G++D A +++ E+
Sbjct: 29 VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV 88
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
GV+ + + I C+N K+ S L ++ E + V +I+ +C+
Sbjct: 89 VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME--EKGVFPDVVTYNTLINAYCRQG 146
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+EEAF+++D + + KP Y + G + VL + K+G++P T Y
Sbjct: 147 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 206
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS------------------ 342
++ + +A+ + + + S D +ALIG +S
Sbjct: 207 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 266
Query: 343 SIDPRSAIVFF------------------NFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ P + I + M+E+G V + T + + LCK E
Sbjct: 267 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEA 326
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
E++ ++ F D ++ +++ G + +A + + M ++ L PDV YN+L++
Sbjct: 327 DELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDG 386
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH---------- 494
C+ + +LW+ M + N +Y ILI+ + +G + A RL+
Sbjct: 387 FCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEAT 446
Query: 495 -------------------------NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
NML KG+ PD TY +L+ G +E N+ AF + N
Sbjct: 447 IITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN 506
Query: 530 KSVNH----DVMLARSILSTF 546
K N DV+ IL+ F
Sbjct: 507 KMENSGLLPDVITYNVILNGF 527
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 171/387 (44%), Gaps = 9/387 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL + + +A ++FDEM +GV + F I +N L Q L +++
Sbjct: 206 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 265
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ +VI ++I GFC+ + EA KV DE+ + C D + Y + +
Sbjct: 266 A--GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKML 323
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E + + + + GV P + I G + + +A L E+++ D N L
Sbjct: 324 SEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTL 383
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G + +N MI + P + L C E ++ + +
Sbjct: 384 IDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGF 443
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ + N +V C +G +A + M KG+ PD YN+L+ +E+ + A
Sbjct: 444 EATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFA 503
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L ++M SG ++ TYN++++ FS G ++ A + M+E+GV PD +TYTSL+ G
Sbjct: 504 LVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHV 563
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSIL 543
+ NL+ AF V HD ML R +
Sbjct: 564 TQNNLKEAFRV------HDEMLQRGFV 584
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 195/427 (45%), Gaps = 15/427 (3%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y++I+ L + + VL ++ ++ D++ Y ++ + N A +F+E
Sbjct: 168 FTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDE 227
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ + + P++ + +L+ +L+ +G +D ALK F +M + G+ + + + I FC N
Sbjct: 228 MP--SQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRN 285
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRECK 258
+ + L + DE+ ++ G V+ V+ I++G CK K + EA ++ E+ R
Sbjct: 286 GVMSEALKVRDEMLEQ------GCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 339
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PDF + + + G++ + + + + + P Y I G + + EL
Sbjct: 340 PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 399
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
++S + + LI ++ S A ++ M+EKG T+ T + + K C+
Sbjct: 400 WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 459
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ + E + D +YN +++ + A+ ++ +M+ GL PDV
Sbjct: 460 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 519
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
YN ++ R+ ++ A+ + +M G + + TY LI+ ++ A R+ ML
Sbjct: 520 YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEML 579
Query: 498 EKGVAPD 504
++G PD
Sbjct: 580 QRGFVPD 586
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 137/275 (49%), Gaps = 4/275 (1%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
VLK K G+ N + GL+ + A E+ + +V ++ LN +I ++
Sbjct: 52 VLKSK---GLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALC 108
Query: 343 SIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ F + M EKG P + T + L C++ +E E+ +S +
Sbjct: 109 KNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVF 168
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN +++ LC +G+ A GV+ EM + G+ PD + YN L+ CCR D + A++++D+M
Sbjct: 169 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 228
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ G +L +++ LI S+ G ++ AL+ F +M G+APD YT L+ G C+ +
Sbjct: 229 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 288
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
A +V ++ + +L +T + LC+ ++
Sbjct: 289 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKML 323
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/282 (18%), Positives = 121/282 (42%), Gaps = 37/282 (13%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++IL L + ++ D + ++ + D + +I + N KA ++F E
Sbjct: 308 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF-E 366
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ ++ P++ N+L+ ++ +++++M R + + I +G+ I +C
Sbjct: 367 MMIQ-RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNM 425
Query: 203 AKLGQVLSMLDEVRKRE--------NSMING-------------------------SVIA 229
+ + + DE+ ++ N+++ G +
Sbjct: 426 GCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITY 485
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+I+GF K + ++ AF +++++ PD I Y ++ F G + E E+++ K +
Sbjct: 486 NTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE 545
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
GV P + Y I G + + + EA + + ++ F DD
Sbjct: 546 RGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 587
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 195/472 (41%), Gaps = 43/472 (9%)
Query: 85 LSYHSILKSL-SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
+SY++++ L RQ++ + Q+ ++ D Y II +L + + KA V
Sbjct: 203 VSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLV 262
Query: 144 EVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ N NSLL S G ++A+ +F M GVE + + C+N
Sbjct: 263 RMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNG 322
Query: 204 KLGQVLSMLDEVRKR---ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + + D + KR NS G+ ++HG+ + + +LD + +PD
Sbjct: 323 RSMEARKIFDSMVKRGHKPNSATYGT-----LLHGYATEGSLVKMHHLLDMMVRNGIQPD 377
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ I+ + G V + ++ K R+ G+ P T Y IV +C
Sbjct: 378 HYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYG------IVMDALC------- 424
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
++G V A+ F +I +G P NL LC R+K
Sbjct: 425 ----------------MVGKVDD-----AMAQFGRLISEGLTPDAVVFRNLIHGLCARDK 463
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
D+ E+ + + +N +++ LC G + A + M R + DV YN+
Sbjct: 464 WDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNT 523
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L++ C + A KL + M G N TYN +I+ + + G IE A LF M KG
Sbjct: 524 LIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKG 583
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
V P TY+++L+GL Q AA E++ + + + ++ LC+
Sbjct: 584 VNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQ 635
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/481 (22%), Positives = 212/481 (44%), Gaps = 18/481 (3%)
Query: 77 QPNFTHSPLSYHSILKSL-SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
+ +T +++ +LK+L R A+D L+++ V T + Y ++ L +
Sbjct: 119 RSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRS 178
Query: 136 QKAFSVFNEVKFNCEDIG---PEIC--NSLLAVLASDG-YIDNALKMFDEMSHRGVEFST 189
Q+A + + + + G P++ N+++ L +G +D A +FD+M +G+
Sbjct: 179 QQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDV 238
Query: 190 IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVL 249
+ + I + + + +L VR +N + + ++HG+C + +A V
Sbjct: 239 VTYNSIISALSKARAMDKAAVVL--VRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVF 296
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
+ +PD Y + G E + K G P + Y + G E
Sbjct: 297 KRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATE 356
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS---IDPRSAIVFFNFMIEKGRVPTLS 366
+ + L +++V D + N LIG+ + +D A++ F+ M +G P
Sbjct: 357 GSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVD--DAMLLFSKMRRQGLNPDTV 414
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T + LC K D+ + + L + D + ++ LC + +A + EM
Sbjct: 415 TYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEM 474
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
+G+ P+ F+N+L+ C+E ++ AK ++D M ++ TYN LI + G++
Sbjct: 475 IGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKV 534
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSI 542
+ A +L M+ GV P+ TY +++ G C+ ++ AF +F +K VN ++ +I
Sbjct: 535 DEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTI 594
Query: 543 L 543
L
Sbjct: 595 L 595
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/449 (21%), Positives = 206/449 (45%), Gaps = 11/449 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+SI+ +LS +R ++ VL ++ N + + ++ A VF
Sbjct: 239 VTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKR 298
Query: 145 VKFNCED-IGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ C D + P++ N+L+ L +G A K+FD M RG + ++ +G + +
Sbjct: 299 M---CRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYAT 355
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
L ++ +LD + + N + I ++I + K +V++A + ++R + PD
Sbjct: 356 EGSLVKMHHLLDMMVR--NGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDT 413
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ Y IV + ++G V + + G+ P +R I GL + +A+EL
Sbjct: 414 VTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVE 473
Query: 322 IVSGKFTIDDDVLNALIGSV--SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
++ ++ N L+ + + R+ +F + M+ + T + L C
Sbjct: 474 MIGRGICPNNIFFNTLLNHLCKEGMVARAKNIF-DLMVRVDVQRDVITYNTLIDGYCLHG 532
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K DE ++ + + + + +YN M++ C +GR+ +A+ + ++M KG++P + Y+
Sbjct: 533 KVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYS 592
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
++++ + AK+L+ M SG ++ TYNI++ + + ALR+F N+
Sbjct: 593 TILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLI 652
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ T+ +++ L + A ++F
Sbjct: 653 DFHLENRTFNIMIDALLKGGRHDEAKDLF 681
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 152/332 (45%), Gaps = 12/332 (3%)
Query: 232 IIHGFCKGKRVEEAFKV-LDELRIRECKPDFIAYRIV-----AEEFKLMGSVFEREVVLK 285
++ C KR EA + L + + C P+ +Y I+ E +++
Sbjct: 132 LLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVA 191
Query: 286 KKRKLGVAPRTNDYREFILGLIVE-RRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-- 342
+ G P Y I GL+ E R++ A L + ++ + D N++I ++S
Sbjct: 192 DDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKA 251
Query: 343 -SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
++D ++A+V M++ G +P T ++L C K ++ + V+K + + D+
Sbjct: 252 RAMD-KAAVVLVR-MVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVF 309
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN ++ +LC +GR EA + M ++G P+ + Y +L+ E L L D M
Sbjct: 310 TYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMM 369
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+G + +NILI +++ G+++ A+ LF M +G+ PD TY +++ LC +
Sbjct: 370 VRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKV 429
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
A F + ++ + + + LC R
Sbjct: 430 DDAMAQFGRLISEGLTPDAVVFRNLIHGLCAR 461
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 169/398 (42%), Gaps = 42/398 (10%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALK 175
D+ Y ++ +L A + F + E + P+ + +L+ L + D A +
Sbjct: 412 DTVTYGIVMDALCMVGKVDDAMAQFG--RLISEGLTPDAVVFRNLIHGLCARDKWDKAEE 469
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIH 234
+ EM RG+ + I F + C+ + + ++ D + + + + VI +I
Sbjct: 470 LAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVD---VQRDVITYNTLID 526
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
G+C +V+EA K+L+ + + KP+ + Y + + G + + + ++ GV P
Sbjct: 527 GYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNP 586
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFN 354
Y + GL RR AKEL +
Sbjct: 587 GIVTYSTILQGLFQARRTAAAKEL----------------------------------YL 612
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
+MI+ G + T + + LC+ N +D+ + +++ L D+ + ++N+M+ L G
Sbjct: 613 WMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGG 672
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
R EA + + +GL P+V Y +M++ + LL L+ + +GC+ N + N
Sbjct: 673 RHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLN 732
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
L+ K + GE+ A + E + +A+T SL+
Sbjct: 733 ALVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLV 770
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL-WDQ 460
+Y+V++ G L A+ + + R G + ++ L++A C + A + +
Sbjct: 93 TYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRR 152
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML-----EKGVAPDATTYTSLLEGL 515
M GC+ N+ +Y IL+ + + AL L H M+ G PD +Y +++ GL
Sbjct: 153 MPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGL 212
Query: 516 CQET-NLQAAFEVFNKSVNH----DVMLARSILSTF 546
+E L A+ +F++ ++ DV+ SI+S
Sbjct: 213 LREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISAL 248
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 197/459 (42%), Gaps = 19/459 (4%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
T S + + IL SL + S+ KQ++V I D +I +FS
Sbjct: 129 TPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFS 188
Query: 141 VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
V ++ I +L+ L G + +L D++ +G + + + +G + C
Sbjct: 189 VLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLC 248
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
K+G+ + +R E+ V+ II G CK K V EA+ E+ R P
Sbjct: 249 ---KIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFP 305
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D I Y + F L G + +L + + P Y I L E ++ EAK L
Sbjct: 306 DVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLL 365
Query: 320 EVIVSGKFTIDDDVLN--------ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
V+ K + +V+ L+G V +A F+ M++ P++ + + +
Sbjct: 366 GVMT--KEGVKPNVVTYSTLMDGYCLVGEV-----HNAKQIFHAMVQTEVNPSVCSYNIM 418
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
LCK DE + + + + + + +YN ++ LC SGR+ A +++E+ +G
Sbjct: 419 INGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQ 478
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
DV Y SL++ C+ L A L+ +M G N TY LI + ++ A +
Sbjct: 479 PADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQK 538
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
LF ++L KG D TY ++ GLC+E L A + +K
Sbjct: 539 LFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSK 577
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 154/322 (47%), Gaps = 1/322 (0%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I+ K K A + ++ ++ +PD + I+ F +G + VL K KLG
Sbjct: 138 ILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLG 197
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAI 350
P T + GL ++ + ++ + +V+ F ++ L+ + I + R AI
Sbjct: 198 YQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAI 257
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ ++ P + + + LCK +E + Y +++ F D+ +Y+ ++
Sbjct: 258 KLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGF 317
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C +G+L A+ ++ EM K ++PDV Y L++A C+E L+ AK L M G N+
Sbjct: 318 CLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNV 377
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TY+ L+ + VGE+ A ++FH M++ V P +Y ++ GLC+ ++ A + +
Sbjct: 378 VTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLRE 437
Query: 531 SVNHDVMLARSILSTFMISLCR 552
++ +V+ ++ + LC+
Sbjct: 438 MLHKNVVPNTVTYNSLIDGLCK 459
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 154/346 (44%), Gaps = 5/346 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++ L D ++ A + EM+ RG+ I + I FC +L S+L+E+
Sbjct: 276 NTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTL 335
Query: 218 RENSMINGSVIA-VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+ IN V ++I CK +++EA +L + KP+ + Y + + + L+G
Sbjct: 336 KN---INPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGE 392
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
V + + + V P Y I GL + + EA L ++ + N+
Sbjct: 393 VHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNS 452
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G S SA+ + +G+ + T ++L LCK D+ + ++ +
Sbjct: 453 LIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERG 512
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ +Y ++ LC RL+ A + Q + KG DV YN ++ C+E +L A
Sbjct: 513 IQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEAL 572
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ +M +GC + T+ I+I E E + A +L H M+ KG+
Sbjct: 573 AMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 158/394 (40%), Gaps = 3/394 (0%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
+L L + A+ + +M +G+E + + I FC ++ S+L ++ K
Sbjct: 138 ILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLG 197
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
++I ++ G C V+++ D++ + + + ++Y + +G
Sbjct: 198 YQ--PNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRC 255
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
+L+ P Y I GL ++ + EA + + S D + LI
Sbjct: 256 AIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLIC 315
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G + A N M K P + T + L LCK K E + V++
Sbjct: 316 GFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKP 375
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
++ +Y+ ++ C G + A + M + ++P V YN ++ C+ + A L
Sbjct: 376 NVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLL 435
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M N TYN LI + G I AL L + +G D TYTSLL+GLC+
Sbjct: 436 REMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKN 495
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
NL A +F K + + + + LC+
Sbjct: 496 QNLDKAIALFMKMKERGIQPNKYTYTALIDGLCK 529
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/205 (18%), Positives = 94/205 (45%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A+ FN M+ P++ + +L K + + K + D+ + +++
Sbjct: 114 HDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSIL 173
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
++ C G++ ++ V+ ++ + G P+ +LM+ C + ++ + D++ A G
Sbjct: 174 INCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGF 233
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
N +Y L++ ++GE A++L + ++ PD Y ++++GLC++ + A++
Sbjct: 234 QMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYD 293
Query: 527 VFNKSVNHDVMLARSILSTFMISLC 551
+ + + + ST + C
Sbjct: 294 FYTEMNSRGIFPDVITYSTLICGFC 318
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 89/212 (41%), Gaps = 16/212 (7%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
A Q S SY+ ++ L + ++ ++L+++ + ++ Y +I L +
Sbjct: 402 AMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSG 461
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
A + E+ + SLL L + +D A+ +F +M RG++ + +
Sbjct: 462 RITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYT 521
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV----LIIHGFCKGKRVEEAFKVL 249
I C+ A+L + + ++ G I V ++I G CK ++EA +
Sbjct: 522 ALIDGLCKGARLKNAQKLFQHI------LVKGCCIDVYTYNVMIGGLCKEGMLDEALAMK 575
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
++ C PD + + I+ S+FE++
Sbjct: 576 SKMEDNGCIPDAVTFEIIIR------SLFEKD 601
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 55/120 (45%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P + + ++ + + A L QM G +L T +ILI+ F +G++ + +
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+L+ G P+ T+L++GLC + ++ + +K V + + T + LC+
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 65/142 (45%), Gaps = 8/142 (5%)
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A + ++M+ KG++PD+ + L+ C + + + ++ G N L+
Sbjct: 151 AISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMK 210
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVNH 534
GE++ +L ++ +G + +Y +LL GLC+ + A ++ ++S
Sbjct: 211 GLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRP 270
Query: 535 DVMLARSILSTFMISLCRRVLI 556
DV++ +I+ LC+ L+
Sbjct: 271 DVVMYNTIID----GLCKDKLV 288
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/482 (23%), Positives = 208/482 (43%), Gaps = 45/482 (9%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
A QPN ++Y ++++ L ++ +LKQ+ D+ Y +I ++
Sbjct: 377 AGVQPN----KITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQH 432
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIG 191
N ++AF + NE++ I P + + + L G + A + ++M G++ +
Sbjct: 433 NKEEAFLLLNEMRKG--GISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFV 490
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ I +C L ++ REN + LII G +++EA + DE
Sbjct: 491 YAPLISGYCREGSFSLACETLKKM-TRENLTPDLYCYNSLII-GLSNVGKMDEAIEYYDE 548
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ + +P+ Y + + + G++ + E +L + G+ P +FI I+E
Sbjct: 549 MLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPN-----DFIYAQILE-- 601
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
G F D+ + VSS M+EKG +P +
Sbjct: 602 -------------GYFKSDN------LEKVSST--------LKSMLEKGLMPDNRLYGIV 634
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
NL V V V+ N D Y ++S C + + +A G++ EM +KG+
Sbjct: 635 IHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGI 694
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
+P +S YN+L++ C+ D + A+ +++ + G N TY LI + + G+I A+
Sbjct: 695 EPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAID 754
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
L++ ML +GVAPDA Y+ L G +LQ A + + + + S +T + C
Sbjct: 755 LYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISS-FNTLVHGFC 813
Query: 552 RR 553
+R
Sbjct: 814 KR 815
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 213/490 (43%), Gaps = 42/490 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++++ L + I K+++ + D Y II L + +A + +E
Sbjct: 279 VTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDE 338
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ +C + P + ++L+ G D A K+ EMS GV+ + I + I C+
Sbjct: 339 M--SCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKL 396
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
++G+ +L ++ K + ++ L+I G + EEAF +L+E+R P+
Sbjct: 397 GRMGRASRILKQMTKI--GYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVY 454
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y I+ +G +L++ G+ P Y I G E A E + +
Sbjct: 455 TYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKM 514
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNL------SKNL 375
T D N+LI +S++ AI +++ M+EKG P T L + NL
Sbjct: 515 TRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNL 574
Query: 376 CKRN--------------------------KSDELVEVYKVLSA---NDYFTDMESYNVM 406
K KSD L +V L + D Y ++
Sbjct: 575 EKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIV 634
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ L +SG ++ A V+ +++ GL PD Y SL+ C+ + A L D+M G
Sbjct: 635 IHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGI 694
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ YN LI F + +I A +F++++ KG+ P+ TYT+L++G C+ +++ A +
Sbjct: 695 EPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAID 754
Query: 527 VFNKSVNHDV 536
++N+ + V
Sbjct: 755 LYNEMLTEGV 764
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 154/354 (43%), Gaps = 3/354 (0%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+++A K+ +EM G + + + I C + + E+ + ++
Sbjct: 259 LESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEME--DYGLVPDGFTY 316
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
II+G CK R ++A +LDE+ P+ + Y + + F G+ E ++K+
Sbjct: 317 GAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSA 376
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRS 348
GV P Y I GL R+ A + + + + D N +I G + +
Sbjct: 377 AGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEE 436
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A + N M + G P + T S + LC+ +S+ + + + A+ + Y ++S
Sbjct: 437 AFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLIS 496
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C G A +++M R+ L PD+ YNSL+ + A + +D+M G
Sbjct: 497 GYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQP 556
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
N TY LI +S G +E A +L H ML G+ P+ Y +LEG + NL+
Sbjct: 557 NDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLE 610
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 136/338 (40%), Gaps = 36/338 (10%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I +CK + +E A KV++E+R C + + Y + G++ E K+ G
Sbjct: 249 LIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYG 308
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAI 350
+ P Y I GL R +AK L + + + V + LI G + + A
Sbjct: 309 LVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAF 368
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN------ 404
M G P T NL + LCK + + K ++ Y D +YN
Sbjct: 369 KIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGH 428
Query: 405 -----------------------------VMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
++++ LC G A G++++M GL P+
Sbjct: 429 LRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNA 488
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y L+ CRE A + +M + +L YN LI S VG+++ A+ +
Sbjct: 489 FVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDE 548
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
MLEKG P+ TY L+ G NL+ A ++ ++ +N
Sbjct: 549 MLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLN 586
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 169/411 (41%), Gaps = 45/411 (10%)
Query: 124 FIIPSLIQGKNTQKAFSVFNEV--KFNCEDIGPEI-C-NSLLAVLASDGYIDNALKMFDE 179
F+ LI G + +FS+ E K E++ P++ C NSL+ L++ G +D A++ +DE
Sbjct: 489 FVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDE 548
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN-GSVIAVLIIHGFCK 238
M +G + + +G I + L + +L ++ NS +N I I+ G+ K
Sbjct: 549 MLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQML---NSGLNPNDFIYAQILEGYFK 605
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+E+ L + + PD Y IV G + VL K G+ P +
Sbjct: 606 SDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLI 665
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMI 357
Y I G + +A L + + NALI G S D A FN +I
Sbjct: 666 YGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSII 725
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
KG P T + L CK +G +R
Sbjct: 726 CKGLPPNCVTYTTLIDGYCK-----------------------------------AGDIR 750
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+A + EM +G+ PD Y+ L C L+ A + ++M A G + + ++N L+
Sbjct: 751 DAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYA-IISSFNTLV 809
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
F + G+++ ++ H M++K + P T +++ GL + L A +F
Sbjct: 810 HGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIF 860
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%)
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
FM G P + T S L + CK + +V + + ++ +YN ++ LC +
Sbjct: 232 GFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRA 291
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G + EA+G +EM+ GL PD Y +++ C+ AK L D+M +G N+ Y
Sbjct: 292 GAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVY 351
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ LI F G + A ++ M GV P+ TY +L+ GLC+ + A + +
Sbjct: 352 STLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQ 408
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%)
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
L V++ LS +D +V+V +GR+R+ V+ MK GL P + N L++
Sbjct: 157 LSSVHRALSGSDQGRRPVVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLK 216
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
R D L K+ M +G S ++ TY+ LI + +V ++E A ++ M E G +
Sbjct: 217 DLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSL 276
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ TY +L+ GLC+ ++ AF + ++ ++ + LC+R
Sbjct: 277 NVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKR 326
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/305 (19%), Positives = 120/305 (39%), Gaps = 47/305 (15%)
Query: 35 EQTLHQLGLRDSLSPS--LVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILK 92
EQ LHQ+ L L+P+ + A+++ Y + + + + + Y ++
Sbjct: 578 EQLLHQM-LNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIH 636
Query: 93 SLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK------ 146
+LS S + A SVL ++ N + DS +Y +I + + +KA + +E+
Sbjct: 637 NLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEP 696
Query: 147 ------------------------FN---CEDIGPEICNSLLAVLASDGY-----IDNAL 174
FN C+ + P N + DGY I +A+
Sbjct: 697 GISCYNALIDGFCKSDDISHARNIFNSIICKGLPP---NCVTYTTLIDGYCKAGDIRDAI 753
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIH 234
+++EM GV + V + L Q L + +E+ R ++I+ ++H
Sbjct: 754 DLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNT---LVH 810
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
GFCK +++E K L + ++ P + + G + E + + ++ +
Sbjct: 811 GFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASH 870
Query: 295 RTNDY 299
R D+
Sbjct: 871 RDTDH 875
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 151/322 (46%), Gaps = 1/322 (0%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I GFC +++ E+ C P+ + Y + + + MG + E +LK
Sbjct: 15 ILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSK 74
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G+ P Y I GL E + EA E+ E + FT D+ N L+ G + A
Sbjct: 75 GMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQA 134
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+V M+ G P++ T + L ++CK + +E + + + +Y ++
Sbjct: 135 LVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDG 194
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
G L EAY ++ EM G P V YN+ + C + + A + +M G + +
Sbjct: 195 FSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPD 254
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ +Y+ +IS F GE++ A ++ M+EKGV+PDA TY+SL++GLC+ L A ++
Sbjct: 255 VVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQ 314
Query: 530 KSVNHDVMLARSILSTFMISLC 551
+ ++ + +T + + C
Sbjct: 315 EMLDMGLPPDEFTYTTLINAYC 336
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 160/353 (45%), Gaps = 9/353 (2%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ + I FC +L + L E+ + N + V +I +CK R++EAF +L
Sbjct: 13 YNILIRGFCSVGELQKGLGCFGEMER--NGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKS 70
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ + +P+ I+Y ++ GS+ E +L++ G P Y + G E
Sbjct: 71 MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGN 130
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
+A + +V + ALI S+ + + A+ FF+ M +G P T +
Sbjct: 131 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 190
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L ++ +E + ++ + + + +YN + C R+ EA GV+QEM KG
Sbjct: 191 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 250
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L PDV Y++++ CR+ L A ++ +M G S + TY+ LI E+ + A
Sbjct: 251 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 310
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
L ML+ G+ PD TYT+L+ C E +L A + HD M+ + L
Sbjct: 311 DLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHL------HDEMIHKGFL 357
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 168/385 (43%), Gaps = 8/385 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ S G + L F EM G + + + I +C+ ++ + +L +
Sbjct: 14 NILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSS 73
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ M + +II+G C+ ++EA+++L+E+ + PD + Y + + G+
Sbjct: 74 K--GMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNF 131
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ V+ + + GV+P Y I + R + A E + + ++ L
Sbjct: 132 HQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTL 191
Query: 338 IGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I S A N M E G P++ T + C + +E + V + +
Sbjct: 192 IDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGL 251
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ SY+ ++S C G L A+ + QEM KG+ PD Y+SL++ C L A
Sbjct: 252 APDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACD 311
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L +M G + TY LI+ + G++ AL L M+ KG PDA TY+ L+ GL
Sbjct: 312 LSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLN 371
Query: 517 QETNLQAAFE-----VFNKSVNHDV 536
++ + A ++ +SV DV
Sbjct: 372 KQARTREAKRLLFKLIYEESVPSDV 396
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 190/470 (40%), Gaps = 49/470 (10%)
Query: 113 NKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDN 172
++++ + Y +I QK F E++ N N+L+ G ID
Sbjct: 4 SRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDE 63
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE--------NSMIN 224
A + MS +G++ + I + V I C + + +L+E+ + N+++N
Sbjct: 64 AFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLN 123
Query: 225 G-----SVIAVLIIHG--------------------FCKGKRVEEAFKVLDELRIRECKP 259
G + L+IH CK + + A + D++RIR +P
Sbjct: 124 GYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRP 183
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
+ Y + + F G + E +L + + G +P Y FI G V R+ EA +
Sbjct: 184 NERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVV 243
Query: 320 EVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ +V D + +I G + A M+EKG P T S+L + LC+
Sbjct: 244 QEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEM 303
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+ E ++ + + D +Y +++ C G L +A + EM KG PD Y
Sbjct: 304 RRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTY 363
Query: 439 NSLMEACCREDLLRPAKKL---------------WDQMFASGCSGNLKTYNILISKFSEV 483
+ L+ ++ R AK+L +D + + + K+ LI F
Sbjct: 364 SVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMK 423
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
G + A R+F +M+E+ P Y ++ G C+ NL AF ++ + ++
Sbjct: 424 GLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIH 473
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 112/477 (23%), Positives = 197/477 (41%), Gaps = 33/477 (6%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN +SY+ I+ L + +L+++ T D Y ++ + N
Sbjct: 77 QPNL----ISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFH 132
Query: 137 KAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+A + E+ N + P + +L+ + ++ A++ FD+M RG+ + +
Sbjct: 133 QALVIHAEMVRN--GVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 190
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELR 253
I F L + +L+E+ + S + SV+ IHG C +R+EEA V+ E+
Sbjct: 191 LIDGFSRQGLLNEAYRILNEMTE---SGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 247
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR-KLGVAPRTNDYREFILGLIVERRI 312
+ PD ++Y + F G + +R +K++ + GV+P Y I GL RR+
Sbjct: 248 EKGLAPDVVSYSTIISGFCRKGEL-DRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRL 306
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
EA +L + ++ D+ LI + D A+ + MI KG +P T S L
Sbjct: 307 TEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVL 366
Query: 372 SKNLCKRNKSDELVEV---------------YKVLSANDYFTDMESYNVMVSFLCTSGRL 416
L K+ ++ E + Y L N + +S ++ C G +
Sbjct: 367 INGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLM 426
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
EA V + M + P + YN ++ CR L A L+ +M SG + T L
Sbjct: 427 HEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITL 486
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV---FNK 530
I + G E + + L +A L+E +E N++A V +NK
Sbjct: 487 IKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVSRLYNK 543
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 92/175 (52%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
MI P + T + L + C + + + + + N ++ +YN ++ C GR
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ EA+G+++ M KG+ P++ YN ++ CRE ++ A ++ ++M G + + TYN
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
L++ + + G AL + M+ GV+P TYT+L+ +C+ NL A E F++
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQ 175
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M KG P L + + + LC+ E E+ + + + D +YN +++ C G
Sbjct: 71 MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGN 130
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+A + EM R G+ P V Y +L+ + C+ L A + +DQM G N +TY
Sbjct: 131 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 190
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC----QETNLQAAFEVFNKS 531
LI FS G + A R+ + M E G +P TY + + G C E L E+ K
Sbjct: 191 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 250
Query: 532 VNHDVMLARSILSTFMISLCRR 553
+ DV+ +I+S F CR+
Sbjct: 251 LAPDVVSYSTIISGF----CRK 268
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN+++ C+ G L++ G EM+R G P+V YN+L++A C+ + A L M
Sbjct: 12 TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 71
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ G NL +YN++I+ G ++ A + M KG PD TY +LL G C+E N
Sbjct: 72 SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNF 131
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A + + V + V + + + S+C+
Sbjct: 132 HQALVIHAEMVRNGVSPSVVTYTALINSMCK 162
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 167/361 (46%), Gaps = 12/361 (3%)
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
MS G G F C+ + L M++ RE+ ++ +V+ +I G +
Sbjct: 1 MSESGFCMDRFTVGCFAHALCKEGRWADALDMIE----REDFKLD-TVLCTHMISGLMEA 55
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+EA L +R C P+ + YR + F + + ++ G P + +
Sbjct: 56 SYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLF 115
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID--PRSAIV-----F 352
+ E+ A +L + + V N IGS+ + P ++
Sbjct: 116 NSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKI 175
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
+ M+ V ++N ++ LC K D+ ++ K + + D +Y+ +++FLC
Sbjct: 176 YGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCH 235
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
+ ++ +A+ + QEMK G+ PDV Y L+++ C+ L+ A+ L+++M + GCS + T
Sbjct: 236 ATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVT 295
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
Y LI + + ++ A +FH M++ G P+ TY +L++GLC+ N+ AFEV+ K +
Sbjct: 296 YTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 355
Query: 533 N 533
Sbjct: 356 G 356
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/469 (20%), Positives = 198/469 (42%), Gaps = 25/469 (5%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++L +Q+ ++ + + S++ ++ S K+ A+ + N
Sbjct: 78 VTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNR 137
Query: 145 VKFNCEDIGPEICNSLLAV------LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ G + N + L S +D A K++ EM + + F
Sbjct: 138 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARC 197
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C K + ++ E+ ++ + + +I C +VE+AF + E+++
Sbjct: 198 LCGVGKFDKAFQLIKEMMRK--GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 255
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD Y I+ + F G + + + + ++ R +G +P Y I + +++ +A ++
Sbjct: 256 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 315
Query: 319 GEVIVSGKFTIDDDVLNALI------GSVS-----------SIDPRSAIVFFNFMIEKGR 361
+V +D AL+ G++S + D + +F
Sbjct: 316 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 375
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P + T L LCK +K D E+ + ++ + Y+ ++ C +G++ A
Sbjct: 376 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 435
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
V +M + G P V Y SL++ ++ L A K+ QM C+ N+ TY +I
Sbjct: 436 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 495
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+GE E AL+L M EKG +P+ TYT+L++GL + + + ++F +
Sbjct: 496 RIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQ 544
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/479 (20%), Positives = 197/479 (41%), Gaps = 58/479 (12%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS--LLAV 163
++K++ D+S Y +I L +KAF +F E+K + P++ L+
Sbjct: 210 LIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM--VGVTPDVYTYTILIDS 267
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ---VLSMLDEVRKREN 220
G I+ A +F+EM G + + + I + + ++ Q + + + R N
Sbjct: 268 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 327
Query: 221 SMINGSVIAVL----------------------------------------------IIH 234
+ G+++ L ++
Sbjct: 328 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 387
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
G CK +V+ A ++LD + C+P+ I Y + + F G + + V + K G P
Sbjct: 388 GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLP 447
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFF 353
+ Y I + + R+ A ++ ++ T + A+I + I + A+
Sbjct: 448 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLL 507
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
+ M EKG P + T + L L K K D ++++ +S + +Y V+++ LC +
Sbjct: 508 SLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAA 567
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G L +A ++ EMK+ + Y ++ + + + + ++M + G Y
Sbjct: 568 GLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFI--ASLGILEEMESYGTVPIAPVY 625
Query: 474 NILISKFSEVGEIEGALRLFHNMLE--KGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+LI FS+ G +E A+ L M+E V D Y SL++ LC + ++ AF ++++
Sbjct: 626 GMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSE 684
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 83/430 (19%), Positives = 166/430 (38%), Gaps = 65/430 (15%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF-- 142
++Y +++ + ++Q+ + + ++ + Y ++ L + N KAF V+
Sbjct: 294 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 353
Query: 143 ---------NEVKFNCED---IGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFS 188
++ F CED + P + +L+ L +D+A ++ D M G E +
Sbjct: 354 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 413
Query: 189 TIGFGVFIWKFCENAKLGQV-------------------LSMLDEVRKR----------- 218
I + I FC+ K+ S++D + K
Sbjct: 414 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 473
Query: 219 ---ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
++S V +I G C+ E+A K+L + + C P+ + Y + + G
Sbjct: 474 QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 533
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVL 334
+ + + + G +P YR I L + +A+ L GE+ K T L
Sbjct: 534 KIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM----KQTYWPKYL 589
Query: 335 NALIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
++ +++ M G VP L K + + +E++K +
Sbjct: 590 QGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMM 649
Query: 393 --ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ TD + Y ++ LC + ++ EA+ + EM R+G P++S + L++
Sbjct: 650 EVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKG------ 703
Query: 451 LRPAKKLWDQ 460
L KK WD+
Sbjct: 704 LVEVKK-WDE 712
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 66/161 (40%), Gaps = 3/161 (1%)
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+S + + D + LC GR +A +I+ R+ D ++
Sbjct: 1 MSESGFCMDRFTVGCFAHALCKEGRWADALDMIE---REDFKLDTVLCTHMISGLMEASY 57
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
A +M + C N+ TY L+S F + ++ R+ + M+ +G P+ + + S
Sbjct: 58 FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
L+ C E + A+++ N+ + + F+ S+C
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSIC 158
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 161/371 (43%), Gaps = 39/371 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+A G++D A ++ M V + I C+ ++ LS+LD++ +
Sbjct: 115 NTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLR 171
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R V +++ C+ E+A VLDE+R + C P+ + Y ++ G V
Sbjct: 172 R--GCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRV 229
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ +L + G P T Y + GL +R + +EL
Sbjct: 230 DDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEEL------------------- 270
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
F M+EK +P T L + C+ + ++V + ++ +
Sbjct: 271 ---------------FAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCA 315
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
T+ N++++ +C GR+ +A+ ++ +M G +PD Y ++++ CR + AK+L
Sbjct: 316 TNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKEL 375
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
++M + C N T+N I + G IE A+ L M E G TY +L+ G C
Sbjct: 376 LNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCV 435
Query: 518 ETNLQAAFEVF 528
+ ++ +A E+F
Sbjct: 436 QGHIDSALELF 446
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 211/466 (45%), Gaps = 18/466 (3%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN ++Y +L+++ + +VL +++ T + Y II + +
Sbjct: 175 QPNV----VTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 230
Query: 137 KAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
A + N + P+ + +LL L + D+ ++F EM + + + F +
Sbjct: 231 DARELLN--RLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDM 288
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
I FC + + + +L+++ E+ + + ++I+ CK RV++AFK+L+++
Sbjct: 289 LIRFFCRGGMVERAIQVLEQMT--EHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGS 346
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
C PD I+Y V + + + +L + + P + FI L + I +
Sbjct: 347 YGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQ 406
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
A L E + T+ NAL+ ID SA+ F M K P T + L
Sbjct: 407 AIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHID--SALELFRSMPCK---PNTITYTTL 461
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
LC + D E+ + D ++ ++NV+VSF C G L EA ++++M G
Sbjct: 462 LTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGC 521
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
P++ YN+L++ ++ A +L + + G S ++ T++ +I S+ IE A++
Sbjct: 522 TPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQ 581
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
LFH + + G+ P A Y +L GLC+ + A + F V++ M
Sbjct: 582 LFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCM 627
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 142/326 (43%), Gaps = 4/326 (1%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I C+ R +A +VL D AY + + G + + + +
Sbjct: 82 LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHL---DAARRLIGSMP 138
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAI 350
VAP Y I L R+ +A L + ++ + L+ ++ A+
Sbjct: 139 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAM 198
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ M KG P + T + + +C+ + D+ E+ L + + D SY ++ L
Sbjct: 199 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGL 258
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C S R + + EM K P+ ++ L+ CR ++ A ++ +QM GC+ N
Sbjct: 259 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNT 318
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
NI+I+ + G ++ A +L ++M G PD +YT++L+GLC+ A E+ N+
Sbjct: 319 TLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNE 378
Query: 531 SVNHDVMLARSILSTFMISLCRRVLI 556
V ++ +TF+ LC++ LI
Sbjct: 379 MVRNNCPPNEVTFNTFICILCQKGLI 404
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/499 (23%), Positives = 218/499 (43%), Gaps = 12/499 (2%)
Query: 30 WTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHS 89
W P LE L L LR SL P V V+ L T +AL FF WA +Q + H P+ Y++
Sbjct: 84 WNPKLEGELRHL-LR-SLKPRQVCAVLQ--LQTDERVALRFFYWADRQWRYRHDPIVYYA 139
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
+L+ LS ++ VL+ + +I + +++ S + + A ++
Sbjct: 140 MLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAG 199
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ ICN+ + VL +D A++ + M + + I + I +C+ +L
Sbjct: 200 IEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAX 259
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGF-CKGKRVEEAFKVLDELRIRECK--PDFIAYRI 266
++ E+ + S I+ + GF CK KR++E ++L E +++ PD + Y
Sbjct: 260 ELIAEMPFKGCS---PDKISYYTVMGFLCKEKRIKE-LRLLMEKMLKDSNLLPDQVTYNT 315
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
G E L++ + Y + E R+ +AKE+ + S
Sbjct: 316 FVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKG 375
Query: 327 FTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
D ++I G A M + G P + + L LCK S E
Sbjct: 376 CIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAR 435
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
E+ + + + +Y+V++ G+ EA +++EM +KG P N L+++
Sbjct: 436 EMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSL 495
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+E+ + AK+ +Q +GC+ N+ + +I F + ++E AL L +M PD
Sbjct: 496 CQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDV 555
Query: 506 TTYTSLLEGLCQETNLQAA 524
TYT++++ L ++ ++ A
Sbjct: 556 VTYTTIIDALGKKGRIEEA 574
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 168/401 (41%), Gaps = 19/401 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+ + +L+ G+ D AL+ E R +G+ + FC ++ + +++E+
Sbjct: 314 NTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFS 373
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ I V +I+G C+ ++V++A K+L ++ CKP+ ++Y + G+
Sbjct: 374 K--GCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNS 431
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E ++ + P Y + G E + EA +L ++ F +N L
Sbjct: 432 LEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLL 491
Query: 338 IGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I S+ + A F + G + + + C+++ + + + + ++
Sbjct: 492 IQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNK 551
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR----EDLLR 452
D+ +Y ++ L GR+ EA + +M R G P Y +++ CR EDLL
Sbjct: 552 HPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLL- 610
Query: 453 PAKKLWDQMFA-SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
KL ++M + C YN +I K G +E A +L +L DA T L
Sbjct: 611 ---KLLEKMLSRQECR---TAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHML 664
Query: 512 LEGLCQE----TNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
+E + + A +FN+++ D+ L + M+
Sbjct: 665 IESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLML 705
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/438 (21%), Positives = 167/438 (38%), Gaps = 76/438 (17%)
Query: 154 PEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG---QVLS 210
P + ++L +L+ A ++ M+ R +E FG + + KL + L+
Sbjct: 134 PIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLT 193
Query: 211 MLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
M+ + + I + I VL++ G R+++A + L+ ++I E P+ I Y + +
Sbjct: 194 MMQKAGIEPDLSICNTAIHVLVM-----GNRLDKAVRFLERMQIVEIXPNVITYNCLIKG 248
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
+ + + + ++ + G +P Y + L E+RI E + L E K D
Sbjct: 249 YCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLME-----KMLKD 303
Query: 331 DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
++L P T + L K DE +E +
Sbjct: 304 SNLL----------------------------PDQVTYNTFVHMLSKHGHGDEALEFLRE 335
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ D Y+ +V C GR+ +A ++ EM KG PDV Y S++ C+E
Sbjct: 336 AEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERK 395
Query: 451 LRPAKKLWDQMFASGCSGNLK-----------------------------------TYNI 475
+ AKK+ QM+ GC N TY++
Sbjct: 396 VDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSV 455
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
L+ F G+ A L M++KG P L++ LCQE + A + +N+
Sbjct: 456 LMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG 515
Query: 536 VMLARSILSTFMISLCRR 553
+ +T + C++
Sbjct: 516 CAVNVVNFTTVIHGFCQK 533
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 99/504 (19%), Positives = 208/504 (41%), Gaps = 67/504 (13%)
Query: 56 INPYLLTHHSLALGFFNWA---------SQQPNFTHSP--LSYHSILKSLSLSRQINAID 104
I P ++T++ L G+ + ++ P SP +SY++++ L ++I +
Sbjct: 235 IXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELR 294
Query: 105 SVL-KQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV---KFNCEDIGPEICNSL 160
++ K +K + + D Y + L + + +A E +F + +G +++
Sbjct: 295 LLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGY---SAI 351
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
+ +G +D A ++ +EM +G + + I C+ K+ Q ML ++ K +
Sbjct: 352 VHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYK--H 409
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
+V +++G CK EA ++++ P+ I Y ++ F+ G E
Sbjct: 410 GCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEA 469
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE---------------VIVSG 325
++++ K G P + I L E ++ EAK E ++ G
Sbjct: 470 CDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHG 529
Query: 326 KFTIDDDVLNAL------------------------IGSVSSIDPRSAIVFFNFMIEKGR 361
F DD+ AL +G I+ + + M+ G
Sbjct: 530 -FCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMK--MLRVGW 586
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVY-KVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
+PT T + C+ + ++L+++ K+LS + T +YN ++ LC+ G L +AY
Sbjct: 587 IPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRT---AYNQVIEKLCSFGNLEQAY 643
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
++ ++ R D + + L+E+ + + + + +MF +LK + K
Sbjct: 644 KLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKL 703
Query: 481 SEVGEIEGALRLFHNMLEKG-VAP 503
G+ E A +L +E+G ++P
Sbjct: 704 MLEGKSEEADKLILRFVERGRISP 727
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 193/457 (42%), Gaps = 45/457 (9%)
Query: 66 LALGFFNWASQ-QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
LAL F +A + QPNF+H+ +Y SI+ LS +R ++ +L + ++I +++
Sbjct: 76 LALQIFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLHKSQIKCGENIFIN 135
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
+I N LA G D AL+ F +
Sbjct: 136 VIR------------------------------NYGLA-----GKPDFALRTFIRIQDFN 160
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
V+ S + F +N + V +M R + + N +LI CK VE
Sbjct: 161 VQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILI-KALCKKNDVES 219
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A KVLDE+ P+ + Y + + G + V + G P Y +
Sbjct: 220 AVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMN 279
Query: 305 GLIVERRICEA----KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKG 360
G + R+ +A ++GE V ++ A + + R+ + M+E+
Sbjct: 280 GYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARN---LLDDMLERQ 336
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
VP+ + + LC+ K +E E++K + + D + ++ +LC G++ EA
Sbjct: 337 YVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEAR 396
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+ E +R G P + YN+L+ C + L A KLWD M G N TYN+LI F
Sbjct: 397 KLFGEFER-GAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGF 455
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
S++G + +R+ ML+ P+ +TY L+E LC+
Sbjct: 456 SKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCK 492
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 97/202 (48%)
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+F N + G +P + T + L K LCK+N + V+V + A ++ +Y ++
Sbjct: 187 MFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGY 246
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
+ G + A V E+ +G PD + Y LM C + L A KL D M +G N
Sbjct: 247 SSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNE 306
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TY +++ + + + A L +MLE+ P + +++ LC+ ++ A E++ +
Sbjct: 307 VTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKR 366
Query: 531 SVNHDVMLARSILSTFMISLCR 552
+ + M +I+ST + LC+
Sbjct: 367 MLKKNCMPDNAIMSTLIHWLCK 388
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/538 (23%), Positives = 226/538 (42%), Gaps = 34/538 (6%)
Query: 5 PATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSP-SLVARVINPYLLTH 63
P+ D ++ S+ N T T+ QL + S + + NP L
Sbjct: 19 PSLDPKLNNTKTPFSSPNSTYTTPNSHTFDTPTISQLIAKQHWSKLKTIVKETNPSSLLQ 78
Query: 64 H--------SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKI 115
H L L +F W ++ H+ + +L L+ ++ N I ++L N
Sbjct: 79 HLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAH 138
Query: 116 TLDSSVYR-----------------FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN 158
+S+++ ++ + ++ A F+ + CN
Sbjct: 139 YSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCN 198
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L L +G I ++ EM R + + + F V I C K+G+ D V
Sbjct: 199 PMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLC---KVGKFQKAGDVVEDM 255
Query: 219 ENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + SVI II G+CK ++ +A +L E+ + P+ I + I+ + F +V
Sbjct: 256 KAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENV 315
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ V ++ ++ G+ P Y I GL ++ EA L + + + NAL
Sbjct: 316 TAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNAL 375
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G + A + + ++G P + T + L K + D+ + ++
Sbjct: 376 INGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGV 435
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ +YN ++ C G ++EA + +EM+ GL D+ YN L++A C++ R A +
Sbjct: 436 CPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVR 495
Query: 457 LWDQMF---ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
L D+M G N+ TYN+LI F G++E A RL + MLEKG+ P+ TTY L
Sbjct: 496 LLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 161/372 (43%), Gaps = 4/372 (1%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L++ L G D A K+ M + + I + I C KL +V + + K
Sbjct: 51 LISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLC---KLNRVEEARELIEKMA 107
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
++ I+ CK KR+++A ++E+ R KPD Y V V E
Sbjct: 108 RYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEE 167
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
++ +K K + P Y I GL RI A EL + + + + N LI
Sbjct: 168 ARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLID 227
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G D +A F+ M+ VP + T + L L K K EV +
Sbjct: 228 GFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTP 287
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
++ +Y+ ++ C R+ EA+ ++++M +G+ P V YN L+ + CR D L A KL+
Sbjct: 288 NVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLF 347
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
M C + TYN L+ +++GA RL+ M+ KG PDA TY +L GL +
Sbjct: 348 RGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRA 407
Query: 519 TNLQAAFEVFNK 530
+ A E+ K
Sbjct: 408 GKVHEAQELMEK 419
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 171/377 (45%), Gaps = 4/377 (1%)
Query: 153 GPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML 212
G N++ A G ++ +++ M G G+G+ I C+ + +L
Sbjct: 9 GAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLL 68
Query: 213 DEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
+R + ++ II+ CK RVEEA ++++++ R PD + Y + E
Sbjct: 69 HTMRLKR--FKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERLC 125
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
+ + +++ G+ P Y + GL E ++ EA+ L E +V + +
Sbjct: 126 KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVV 185
Query: 333 VLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
N LI G + +A F M KG VPT + + L CK+ +V+ +
Sbjct: 186 TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 245
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
++ ++ +Y ++ L SG+++ A V+ M +KG+ P+V+ Y+ L++ C+ +
Sbjct: 246 VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRV 305
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A KL +QM G + + TYNIL++ ++E A +LF M ++ P TY +L
Sbjct: 306 DEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTL 365
Query: 512 LEGLCQETNLQAAFEVF 528
L LC L A ++
Sbjct: 366 LRALCHHKQLDGAHRLY 382
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 150/323 (46%), Gaps = 37/323 (11%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE-REVVLKKKRK 289
++I CK +EA+K+L +R++ K IAY + + V E RE++ K R
Sbjct: 50 ILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMAR- 108
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSA 349
AP G IVER +C+ K IDD + + I P +
Sbjct: 109 --YAPPD----ALTYGPIVER-LCKTKR-----------IDDALATVEEMATRGIKPDAF 150
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
I +NF++ LC+ K +E +++ + ++ +YN +++
Sbjct: 151 I--YNFVLS---------------GLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLING 193
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC + R+ AY + +EM KG P YN+L++ C++ L AK ++D+M S C N
Sbjct: 194 LCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPN 253
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ TY LI S+ G+++ A + M++KGV P+ TY+ L++G C+ + A ++
Sbjct: 254 VVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLE 313
Query: 530 KSVNHDVMLARSILSTFMISLCR 552
+ V + + + SLCR
Sbjct: 314 QMVTQGIAPTVVTYNILLNSLCR 336
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/412 (19%), Positives = 186/412 (45%), Gaps = 4/412 (0%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+++++ + + ++ + V + + TL +S Y +I L + N +A+ + + +
Sbjct: 12 TFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTM 71
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ ++++ L ++ A ++ ++M+ R + +G + + C+ ++
Sbjct: 72 RLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGPIVERLCKTKRI 130
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
L+ ++E+ R + + I ++ G C+ ++VEEA + +++ + P+ + Y
Sbjct: 131 DDALATVEEMATR--GIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYN 188
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + + K+ G P Y I G ++ + AK++ + +V
Sbjct: 189 TLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRS 248
Query: 326 KFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ LI +S S ++A + M++KG P ++T S L CK + DE
Sbjct: 249 NCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEA 308
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
++ + + + +YN++++ LC + +L +A+ + + M ++ P V YN+L+ A
Sbjct: 309 HKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRA 368
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
C L A +L+ +M A GC + TY+ L + G++ A L M
Sbjct: 369 LCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 148/352 (42%), Gaps = 42/352 (11%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
L+Y I++ L +++I+ + ++++ I D+ +Y F++ L Q + ++A +F
Sbjct: 115 LTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFE- 173
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
K + I P + N+L+ L I+ A ++F EM+ +G + + +
Sbjct: 174 -KMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSY---------- 222
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
N++I+G FCK K + A V D++ C P+ +
Sbjct: 223 -----------------NTLIDG----------FCKKKDLVAAKDVFDKMVRSNCVPNVV 255
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + G V VL K GV P Y I G RR+ EA +L E +
Sbjct: 256 TYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQM 315
Query: 323 VSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
V+ N L+ S+ D A F M ++ PT+ T + L + LC +
Sbjct: 316 VTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQL 375
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
D +Y + A D +Y+ + L +G++ EA ++++MK +P
Sbjct: 376 DGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 91/191 (47%), Gaps = 1/191 (0%)
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
+P +T + ++ K + +++ EVY+ + Y Y +++S LC G EAY
Sbjct: 7 IPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYK 66
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
++ M+ K Y++++ C+ + + A++L ++M A + TY ++ +
Sbjct: 67 LLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERLC 125
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
+ I+ AL M +G+ PDA Y +L GLCQE ++ A +F K V +
Sbjct: 126 KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVV 185
Query: 542 ILSTFMISLCR 552
+T + LC+
Sbjct: 186 TYNTLINGLCK 196
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 93/201 (46%), Gaps = 1/201 (0%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
+ M+E G S L LCK DE ++ + + +Y+ ++++LC
Sbjct: 33 YQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCK 92
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
R+ EA +I++M R PD Y ++E C+ + A ++M G +
Sbjct: 93 LNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFI 151
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YN ++S + ++E A LF M+++ + P+ TY +L+ GLC+ ++ A+E+F +
Sbjct: 152 YNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMA 211
Query: 533 NHDVMLARSILSTFMISLCRR 553
+ +T + C++
Sbjct: 212 GKGYVPTEVSYNTLIDGFCKK 232
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 212/481 (44%), Gaps = 19/481 (3%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N T + ++Y++I+ L ++ ++ + VL+ + + LD Y II L + + +A
Sbjct: 194 NCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRA 253
Query: 139 FSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
V + + + P++ N+++ L +D A + M +GV+ + + I
Sbjct: 254 EGVLQHMID--KGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTII 311
Query: 197 WKFCENAKL----GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
C+ + G + M+D+ K + N +IHG+ +E + L+E+
Sbjct: 312 DGLCKAQAVDRADGVLQHMIDKDVKPDIQTYN------CLIHGYLSTGEWKEVVRRLEEM 365
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
R PD + Y ++ + G E + + G+ P Y + G I
Sbjct: 366 YARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAI 425
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVSS---IDPRSAIVFFNFMIEKGRVPTLSTLS 369
+ +L +++V+ + ++ + N ++ + + ID A+ F+ M + G P + T
Sbjct: 426 ADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMID--EAMHIFSRMSQHGLSPDVVTYG 483
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
L LCK + D+ V + + + + +N +V LCT R +A + EM +
Sbjct: 484 ILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQ 543
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
G+ P+V F+N++M C E + A++L D M G N+ +YN LI G + A
Sbjct: 544 GVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEA 603
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
+L M+ G+ PD +Y +LL G C+ + A+ +F + + V ST +
Sbjct: 604 AQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQG 663
Query: 550 L 550
L
Sbjct: 664 L 664
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 186/444 (41%), Gaps = 7/444 (1%)
Query: 113 NKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDN 172
NK+ D Y + + + F+ F + + + N LL L +D
Sbjct: 84 NKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDE 143
Query: 173 ALK-MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV- 230
A+ + M G + + + C ++ + L +L + + +V+
Sbjct: 144 AMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYN 203
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
II G CK + V+ A VL + + K D + Y + + +V E VL+
Sbjct: 204 TIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDK 263
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDPR 347
GV P Y I GL + + A+ + + ++ D N +I + ++D
Sbjct: 264 GVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRA 323
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
+ MI+K P + T + L + E+V + + A D+ +Y++++
Sbjct: 324 DGV--LQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLL 381
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+LC +G+ EA + M RKG+ P+V+ Y L+ + L D M A+G S
Sbjct: 382 DYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGIS 441
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N +NI++ +++ I+ A+ +F M + G++PD TY L++ LC+ + A
Sbjct: 442 PNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLK 501
Query: 528 FNKSVNHDVMLARSILSTFMISLC 551
FN+ +N V + ++ + LC
Sbjct: 502 FNQMINDGVTPNSVVFNSLVYGLC 525
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 118/506 (23%), Positives = 217/506 (42%), Gaps = 35/506 (6%)
Query: 66 LALGFFN-WASQQPNFTHSPLSYHSILKSL-----SLSRQINAIDSVLKQ-VKVNKITLD 118
LA+ FN A N L +SIL + A +LK +VN++ ++
Sbjct: 70 LAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVIN 129
Query: 119 SSVYRFIIPSLIQGKNTQKAFSVF--NEVKFNCEDIGPEI--CNSLLAVLASDGYIDNAL 174
++ L K +A + +F C P + CN+LL L ++ ++ AL
Sbjct: 130 Q-----LLNGLCDAKRVDEAMDILLRRMPEFGCM---PNVVSCNTLLKGLCNEKRVEEAL 181
Query: 175 KMFDEMSHRG--------VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
++ M+ G V ++TI G+ + + A+ G + M+D+ K +
Sbjct: 182 ELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAE-GVLQHMIDKGVKLD------V 234
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
V II G CK + V+ A VL + + KPD + Y + + +V E VL+
Sbjct: 235 VTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQH 294
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSID 345
GV P Y I GL + + A + + ++ D N LI G +S+ +
Sbjct: 295 MIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGE 354
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
+ + M +G P + T S L LCK K E +++ + ++ Y +
Sbjct: 355 WKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGI 414
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++ G + + ++ M G+ P+ +N ++ A ++ ++ A ++ +M G
Sbjct: 415 LLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHG 474
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
S ++ TY ILI ++G ++ A+ F+ M+ GV P++ + SL+ GLC + A
Sbjct: 475 LSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAE 534
Query: 526 EVFNKSVNHDVMLARSILSTFMISLC 551
E+F + + V +T M +LC
Sbjct: 535 ELFFEMWDQGVRPNVVFFNTIMCNLC 560
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/493 (20%), Positives = 213/493 (43%), Gaps = 52/493 (10%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++I+ L ++ ++ + VL+ + + D Y II L + + +A V
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQH 329
Query: 145 VKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ +D+ P+I N L+ S G ++ +EM RG++ + + + + C+N
Sbjct: 330 MID--KDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKN 387
Query: 203 AKLGQVLSMLDEVRKRENSMINGSV-----IAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
K E RK MI + I +++HG+ + + +LD +
Sbjct: 388 GKC-------TEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGI 440
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
P+ + IV + + E + + + G++P Y I L R+ +A
Sbjct: 441 SPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVL 500
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSSIDP----------------RSAIVFFNFMI---- 357
+++ T + V N+L+ + ++D R +VFFN ++
Sbjct: 501 KFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLC 560
Query: 358 EKGRV----------------PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+G+V P + + + L C ++DE ++ V+ + D+
Sbjct: 561 NEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLI 620
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
SY+ ++ C +GR+ AY + +EM RKG+ P Y+++++ AK+L+ M
Sbjct: 621 SYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNM 680
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
SG ++ TYNI+++ + ++ A ++F ++ K + P+ T+T +++ L +
Sbjct: 681 IKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRK 740
Query: 522 QAAFEVFNKSVNH 534
+ A ++F +H
Sbjct: 741 KDAMDLFASIPSH 753
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 179/404 (44%), Gaps = 14/404 (3%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
I N +L A ID A+ +F MS G+ + +G+ I C KLG+V D+
Sbjct: 446 IFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALC---KLGRV----DDA 498
Query: 216 RKRENSMIN-----GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
+ N MIN SV+ +++G C R E+A ++ E+ + +P+ + + +
Sbjct: 499 VLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCN 558
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
G V + ++ ++GV P Y I G + R EA +L +V+VS D
Sbjct: 559 LCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPD 618
Query: 331 DDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
+ L+ G + +A F M+ KG P T S + + L + E E+Y
Sbjct: 619 LISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYL 678
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+ + D+ +YN++++ LC + + EA+ + Q + K L P++ + +++ +
Sbjct: 679 NMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGG 738
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
+ A L+ + + G N+ TY I++ + G ++ LF M + G PD+
Sbjct: 739 RKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLN 798
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+++ L + A +K + L S ++ +ISL R
Sbjct: 799 AIIRSLLGRGEIMRAGAYLSKIDEMNFSLEAST-TSLLISLFSR 841
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 161/380 (42%), Gaps = 33/380 (8%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV----LSMLDEVRKRENSMING 225
ID+ALK+FDE+ S F + A+ +S+ + + + ++ +
Sbjct: 30 IDDALKLFDELLPHARPASVRAFN-HLLNVVARARCSSTSELAVSLFNRMARACSNKVRP 88
Query: 226 SVIAVLIIHG-FCKGKRVEEAFKV----------LDELRIRECKPDFIAYRIVAEEFKLM 274
+ I+ G FC+ R+E F ++E+ I + + V E
Sbjct: 89 DLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAM--- 145
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV---SGKFTIDD 331
+++L++ + G P + GL E+R+ EA EL + G T +
Sbjct: 146 ------DILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNV 199
Query: 332 DVLNALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
N +I + ++D + MI+KG + T S + LCK D V
Sbjct: 200 VTYNTIIDGLCKAQAVDRAEGV--LQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVL 257
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+ + D+ +YN ++ LC + + A GV+Q M KG+ PDV YN++++ C+
Sbjct: 258 QHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKA 317
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
+ A + M +++TYN LI + GE + +R M +G+ PD TY
Sbjct: 318 QAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTY 377
Query: 509 TSLLEGLCQETNLQAAFEVF 528
+ LL+ LC+ A ++F
Sbjct: 378 SLLLDYLCKNGKCTEARKIF 397
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 158/386 (40%), Gaps = 41/386 (10%)
Query: 135 TQKAFSVFNEVKFNCED-IGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
++ A S+FN + C + + P++C L G I++ F + G + +
Sbjct: 68 SELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVV 127
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ C+ ++ + + +L R E + V ++ G C KRVEEA ++L
Sbjct: 128 INQLLNGLCDAKRVDEAMDILLR-RMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHT 186
Query: 252 LRIR---ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
+ C P+ + Y + + +V E VL+ GV Y I GL
Sbjct: 187 MAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGL-- 244
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTL 368
C+A+ ++D + MI+KG P + T
Sbjct: 245 ----CKAQ--------------------------AVDRAEGV--LQHMIDKGVKPDVVTY 272
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ + LCK D V + + D+ +YN ++ LC + + A GV+Q M
Sbjct: 273 NTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMID 332
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
K + PD+ YN L+ + + ++M+A G ++ TY++L+ + G+
Sbjct: 333 KDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTE 392
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEG 514
A ++F+ M+ KG+ P+ T Y LL G
Sbjct: 393 ARKIFYCMIRKGIKPNVTIYGILLHG 418
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 163/414 (39%), Gaps = 42/414 (10%)
Query: 83 SPLSY--HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
SP +Y + +L + + I+ + ++ + ++ D Y +I +L + A
Sbjct: 441 SPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVL 500
Query: 141 VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
FN++ + + NSL+ L + + A ++F EM +GV + + F + C
Sbjct: 501 KFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLC 560
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
GQV+ + E + +VI+ +I G C R +EA ++LD + KP
Sbjct: 561 NE---GQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKP 617
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D I+Y + + G + + ++ + GV P Y + GL RR EAKEL
Sbjct: 618 DLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELY 677
Query: 320 -EVIVSGK---FTIDDDVLNAL------------IGSVSSIDPRSAIVFFNFMIE----- 358
+I SG+ + +LN L S+ S D R I+ F MI+
Sbjct: 678 LNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKG 737
Query: 359 ---------------KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
G VP + T + KN+ + DE ++ + + D
Sbjct: 738 GRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVML 797
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
N ++ L G + A + ++ + S + L+ RE+ AK L
Sbjct: 798 NAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSL 851
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 4/164 (2%)
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+N D+ +Y+++ C GR+ + + + G + N L+ C +
Sbjct: 83 SNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVD 142
Query: 453 PAKK-LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG---VAPDATTY 508
A L +M GC N+ + N L+ +E AL L H M E G P+ TY
Sbjct: 143 EAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTY 202
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++++GLC+ + A V ++ V L ST + LC+
Sbjct: 203 NTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCK 246
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 130/561 (23%), Positives = 241/561 (42%), Gaps = 55/561 (9%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
KW P E+ L L L+ + LV ++ + ++ + FF WA ++ NF H +Y
Sbjct: 75 KWGPDAEKALEVLKLK--VDHRLVRSILE--IDVEINVKIQFFKWAGKRRNFQHDCSTYM 130
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNK-ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
++++ L +R + +++V N +++ V ++ +L + K KA SVF + K
Sbjct: 131 ALIRCLEEARLYGEMYRTIQEVVRNTYVSVGPVVLSELVKALGRAKMVSKALSVFYQAKG 190
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF-STIGFGVFIWKFCENAKLG 206
NS++ +L +G + +++ EM + G F TI + I + + +
Sbjct: 191 RKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRND 250
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ + DE++ +N M I ++ + K +VE+A + +E++ C P Y
Sbjct: 251 SAIRLFDEMK--DNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTE 308
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRT---NDYREFILGLI--VERRICEAKELGEV 321
+ + G V E + K G+ P N+ ILG + +E E+G
Sbjct: 309 LIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMN-ILGKVGRLEELTNVFNEMGTW 367
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
+ + V+ AL S + + S+ +F+ M G P+ T S L CK N+
Sbjct: 368 RCTPTVVSYNTVIKALFESKAPVSEVSS--WFDKMKADGVSPSEFTYSILIDGYCKTNRV 425
Query: 382 DE--------------------------LVEVYKVLSANDYFTDMES---------YNVM 406
++ L + + +AN+ F +++ Y VM
Sbjct: 426 EKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVM 485
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ G+L EA + EMK +G PDV YN+LM + ++ A L +M +GC
Sbjct: 486 IKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGC 545
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF- 525
+ ++ ++NI+++ F+ G A+ +F M G+ PD TY +LL + A
Sbjct: 546 TADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAAR 605
Query: 526 ---EVFNKSVNHDVMLARSIL 543
E+ +K +D + SIL
Sbjct: 606 LMREMKDKGFEYDAITYSSIL 626
>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
Length = 540
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 212/460 (46%), Gaps = 21/460 (4%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY+ +++ L L+ + + +LK+++ I + I+ +L + K +A S F+ V
Sbjct: 6 SYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYFHSV 65
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
D+ +L+ LA G ID A ++F+EMS G + + + I + +
Sbjct: 66 SPR-SDLDVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQ-CVVAYTAIINALFKAHRP 123
Query: 206 GQVLSMLDEV--RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
Q ++ + + RK + + +V+ I G CK ++ A +V E+ + KPD I
Sbjct: 124 DQAIACFERMVARKCDPDLRTFTVV----ITGLCKAGKLNRACEVFQEMNRKGWKPDIIV 179
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA----KELG 319
Y + + + E +L++ G+ P Y FI GL R+ EA +E+G
Sbjct: 180 YTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMG 239
Query: 320 EVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
++ + +VL+ + G V A+ + M++KG + +NL L
Sbjct: 240 KMCAA-------EVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYV 292
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
++DE E+++ + D +Y ++VS C G+++ A V++ M GL+ + Y
Sbjct: 293 RRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVY 352
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
NSLM+ + R A ++ M ++ TYNIL+ ++G+ A + M E
Sbjct: 353 NSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRE 412
Query: 499 K-GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ G+ P +Y +L+ GL + A +VF + V++ V+
Sbjct: 413 RDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVV 452
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/443 (20%), Positives = 191/443 (43%), Gaps = 19/443 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +I+ +L + + + + +++ K D + +I L + +A VF E
Sbjct: 108 VAYTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQE 167
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ N + P+I SL+ L+ +D A K+ E+ RG++ + + + FI C+N
Sbjct: 168 M--NRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKN 225
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIH----GFCKGKRVEEAFKVLDELRIRECK 258
++ + ++ E+ G + A ++H G+ ++EEA + DE+ +
Sbjct: 226 GRVEEAGKLVREM---------GKMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVT 276
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
D Y + + E + + + + G P T Y + + ++ A ++
Sbjct: 277 LDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKV 336
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
E++ + + V N+L+ ++ R AI ++ M+ K P++ T + L LCK
Sbjct: 337 VEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCK 396
Query: 378 RNKSDELVEVYKVLSANDYFT-DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
++ + V + + D + SY ++ L +GR EA V EM G+ PD
Sbjct: 397 LGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCP 456
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
SL++A D + A +L M G + + YN L+ ++ A + M
Sbjct: 457 SCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVLVEM 516
Query: 497 LEKGVAPDATTYTSLLEGLCQET 519
++ PD +T+ ++ G +T
Sbjct: 517 MDNSCVPDGSTFRAMKLGFKADT 539
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 128/313 (40%), Gaps = 45/313 (14%)
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D +Y IV L G +LK+ LG+ + + I+ + +CE KE+
Sbjct: 3 DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIK------KSQVTHGIILKALCERKEVD 56
Query: 320 EVI-----VSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+ + VS + +D LI G S A F M G + + +
Sbjct: 57 QALSYFHSVSPRSDLDVVSYTTLIMGLADSGRIDVACELFEEMSSSGS-QCVVAYTAIIN 115
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
L K ++ D+ + ++ + A D+ ++ V+++ LC +G+L A V QEM RKG P
Sbjct: 116 ALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKP 175
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF------------- 480
D+ Y SL++ + ++ A+KL ++ + G TY IS
Sbjct: 176 DIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLV 235
Query: 481 --------SEV-----------GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+EV G+IE AL L M++KGV D YT+L+ GL
Sbjct: 236 REMGKMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRN 295
Query: 522 QAAFEVFNKSVNH 534
A E+F V
Sbjct: 296 DEAQEMFEAMVRQ 308
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 90/180 (50%), Gaps = 2/180 (1%)
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
K LC+R + D+ + + +S D+ SY ++ L SGR+ A + +EM G
Sbjct: 47 KALCERKEVDQALSYFHSVSPRSDL-DVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQ 105
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
V+ Y +++ A + A +++M A C +L+T+ ++I+ + G++ A +
Sbjct: 106 CVVA-YTAIINALFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEV 164
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
F M KG PD YTSL++GL + + + A ++ + V+ + ++F+ LC+
Sbjct: 165 FQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCK 224
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 142/594 (23%), Positives = 255/594 (42%), Gaps = 74/594 (12%)
Query: 15 QAIISASNR-TRPARKWTPLLEQTLHQLG----LRDSLSPSLVARVINP----YLLTHHS 65
QA+++A R +PARK L+ + + G R + S+ AR I P Y H+
Sbjct: 270 QAVVTAFERIKKPARKEYGLMVKYYGRRGDMHHARQTFE-SMRARGIEPSSHVYSSLIHA 328
Query: 66 LALGFFNWAS-------QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLD 118
A+G + ++ + ++Y I+ + +A D ++ K +L+
Sbjct: 329 YAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLN 388
Query: 119 SSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFD 178
+ +Y II + Q N +A ++ E++ D +I ++++ G + L +FD
Sbjct: 389 AVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFD 448
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFC 237
+ G S I +G I + K+G+V L+ + + S I ++ ++I+GF
Sbjct: 449 RLKECGFFPSVISYGCLINLY---TKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFL 505
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV-------------------- 277
K K AF V ++ KPD + Y + F MG++
Sbjct: 506 KLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTR 565
Query: 278 --------FEREVVLKKK-------RKLGVAPRTNDYREFILGLIVERRICEAKE-LGEV 321
F R +++ R+ G P + Y ILGL+ +R++ +A L E+
Sbjct: 566 TFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEM 625
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
V+G + + G S D A +F + +G + T L K+ CK +
Sbjct: 626 NVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRM 685
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+ V K +SA + + YN+++ G + EA ++Q+M+++GL PD+ Y S
Sbjct: 686 QSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSF 745
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ ACC+ ++ A ++ +M ASG NLKTY LI+ ++ E AL F M G
Sbjct: 746 INACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGF 805
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
PD Y L+ L +A F A+S + + ++S+CR ++
Sbjct: 806 KPDKAVYHCLVTSLLS----RATF-------------AQSYVYSGLLSVCREMI 842
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/491 (23%), Positives = 220/491 (44%), Gaps = 17/491 (3%)
Query: 49 PSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLK 108
P L RV++ + +AL FF W QP+F S + +IL L + ++A V++
Sbjct: 85 PHLFIRVLHS-MRIRPRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVME 143
Query: 109 QVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLAS 166
+V S ++ LI G VF+++ N + P++ CN +L VL
Sbjct: 144 RVV-------SFEMHGVVDVLIAGH--VXCLLVFDKMIRN--GLLPDVKNCNRILRVLRD 192
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
+ + A ++ M G++ + + + + +C+ ++ Q L +L E+++R
Sbjct: 193 ENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQER--GCYPND 250
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
V ++++G K +E+A +++E+ Y + F G E ++++
Sbjct: 251 VTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEE 310
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSID 345
P + Y + GL ++ + ++ KFT D N+L+ G +
Sbjct: 311 MVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGC 370
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
A + F+ + + VPT+ T + L LC D + + K ++ F D+ +Y +
Sbjct: 371 ISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTI 430
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+V+ G + A G EM KGL PD YN+ + + A + ++M A+G
Sbjct: 431 LVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAG 490
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
++ TYN+ + + G E A L NM+ G+ PD TYTS++ G + +L+ A
Sbjct: 491 FPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAR 550
Query: 526 EVFNKSVNHDV 536
EVFN+ ++ V
Sbjct: 551 EVFNEMLSKGV 561
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/477 (20%), Positives = 199/477 (41%), Gaps = 19/477 (3%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+++L S +++ +L +++ + Y ++ L + ++A + E
Sbjct: 216 VTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEE 275
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + ++ N L+ G A + +EM +R + + ++ C K
Sbjct: 276 MLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLC---K 332
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLI-----IHGFCKGKRVEEAFKVLDELRIRECKP 259
QV VR R + M+ ++ ++G+C+ + EAF + DEL+ R+ P
Sbjct: 333 WVQVTG----VRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVP 388
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKL---GVAPRTNDYREFILGLIVERRICEAK 316
I Y + + G + + L+ K+++ G+ P Y + G + A+
Sbjct: 389 TVITYNTLIHGLCMWGYL---DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445
Query: 317 ELGEVIVSGKFTIDDDVLNA-LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
++S D N ++G + D A M+ G P + T + L
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C++ +E ++ + + ++ D +Y +++ +G LR+A V EM KG+ P V
Sbjct: 506 CQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSV 565
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y L+ A + +L A + +M N+ TYN +I+ ++ A + F
Sbjct: 566 VTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDE 625
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M EKG+ P+ +YT L+ C + A ++ + ++ + S F+ +L R
Sbjct: 626 MEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHR 682
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
+ M + G PT+ T + + + CK + D+ +E+ + + + +YNV+V+ L
Sbjct: 203 YGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSK 262
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G L +A G+I+EM GL+ YN L+ C++ L A L ++M L T
Sbjct: 263 KGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLST 322
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YN L+ + ++ G F +ML+ PD ++ SLL G C+ + AF +F++
Sbjct: 323 YNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELK 382
Query: 533 NHDVMLARSILSTFMISLC 551
D++ +T + LC
Sbjct: 383 CRDLVPTVITYNTLIHGLC 401
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%)
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
V+ + N D+++ N ++ L L +A V M++ G+ P V YN+++++ C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+E + A +L +M GC N TYN+L++ S+ GE+E A L ML G+ A
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
TY L+ G CQ+ AF++ + VN S +T M LC+ V +
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQV 336
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 177/435 (40%), Gaps = 41/435 (9%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y++++ L Q+ + + +K T D + ++ + +AF +F+E+
Sbjct: 322 TYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDEL 381
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGV-----EFSTIGFGVFIWK 198
K C D+ P + N+L+ L GY+D AL++ EM+ +G+ ++ + G F
Sbjct: 382 K--CRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLG 439
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
+ A+ G ML + K + N ++ G K AF + +E+
Sbjct: 440 YVSMAR-GFFNEMLSKGLKPDRFAYNTRIV------GEMKIADTSVAFSMQEEMLAAGFP 492
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD I Y + G+ E +L+ G+ P Y I G + + +A+E+
Sbjct: 493 PDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREV 552
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
++S LI + ++ A ++F+ M+EK + T + + LC
Sbjct: 553 FNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCM 612
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ DE + + + + SY ++++ C G EA + +EM + + PD SF
Sbjct: 613 TRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPD-SF 671
Query: 438 YNSLMEACCRED-----------------------LLRPAKKLWDQMFASGCSGNLKTYN 474
+S+ D LLRP K + ++ FA S L++
Sbjct: 672 THSVFLKNLHRDYQVHAVQCVESLIQNVEDNINVRLLRPRKNVMEENFARSQSPMLRSSA 731
Query: 475 ILISKFSEVGEIEGA 489
LI SE+G G+
Sbjct: 732 FLIGSSSELGNGNGS 746
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/511 (22%), Positives = 225/511 (44%), Gaps = 49/511 (9%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A GF +W ++ F SY +++ L+ + +++ + ++ + D + Y +I
Sbjct: 168 ARGFLDWMWKE-GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILI 226
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRG 184
++ K+ + A +++ + + P + N +++ L+ G +D+ LK+++ M
Sbjct: 227 DGFLKEKDHKTAMELWDRL-LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNE 285
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
E + I C+ + + S+ +E+ +R+ S+ V ++ GFC+ +++E
Sbjct: 286 REKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI--DVVTYNTMLGGFCRCGKIKE 343
Query: 245 AFKVLDELRIRECKP--DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
+ L+ RI E K + ++Y I+ + G + E ++ + G A Y F
Sbjct: 344 S---LELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIF 400
Query: 303 ILGLIV-----------------------------------ERRICEAKELGEVIVSGKF 327
I GL V ++R+ EA L + +
Sbjct: 401 IHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGV 460
Query: 328 TIDDDVLNALIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
++ V NALIG + D R A F M + G PT+ + + L LCK K E
Sbjct: 461 ELNSHVCNALIGGLIR-DSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEAS 519
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
K + N + D+++Y++++ LC ++ A + + + GL+ DV +N L+
Sbjct: 520 AFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGL 579
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C L A + M C+ NL TYN L+ F +VG+ A ++ M + G+ PD
Sbjct: 580 CSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDI 639
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+Y ++++GLC + A E F+ + NH +
Sbjct: 640 ISYNTIMKGLCMCRGVSYAMEFFDDARNHGI 670
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 132/578 (22%), Positives = 230/578 (39%), Gaps = 98/578 (16%)
Query: 46 SLSPSLVARVI----NPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQIN 101
SLSP V +++ NP A F+ A++ P + HS + YH IL+ LS +R +N
Sbjct: 7 SLSPKHVLKLLKSEKNP------RAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVN 60
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK--FNCEDIGPEI--C 157
+ +++ ++ + D V +I + + +A VF ++ F CE P I
Sbjct: 61 HVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCE---PAIRSY 117
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+LL +F GV + + V I C+ + + LD + K
Sbjct: 118 NTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWK 177
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF----- 271
V + +I+ K ++++A ++ DE+ R PD Y I+ + F
Sbjct: 178 EG---FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKD 234
Query: 272 -----KLMGSVFEREVV-----------------------LKKKRKLGVAPRTND---YR 300
+L + E V LK ++ R D Y
Sbjct: 235 HKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYS 294
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEK 359
I GL + +A+ + + K +ID N ++G + ++ + M K
Sbjct: 295 SLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK 354
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
V +S + L K L + K DE +++++ A Y D +Y + + LC +G + +A
Sbjct: 355 NSVNIVS-YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKA 413
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL---------------------- 457
GV+QE++ G DV Y S+++ C++ L A L
Sbjct: 414 LGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGG 473
Query: 458 -------------WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
+M +GC + +YNILI + G+ A MLE G PD
Sbjct: 474 LIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPD 533
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNK----SVNHDVML 538
TY+ LL GLC++ + A E++++ + DVM+
Sbjct: 534 LKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMM 571
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 188/438 (42%), Gaps = 21/438 (4%)
Query: 88 HSILKS-LSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
H+I+ S LS +++ + +++K N+ D Y +I L N KA SVFNE+
Sbjct: 258 HNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELD 317
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
I N++L G I +L+++ M H+ + + + + I EN K+
Sbjct: 318 ERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKID 376
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ +M+ + + + + + I HG C V +A V+ E+ D AY
Sbjct: 377 EA-TMIWRLMPAKGYAADKTTYGIFI-HGLCVNGYVNKALGVMQEVESSGGHLDVYAYAS 434
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA----KELGE-- 320
+ + + E ++K+ K GV ++ I GLI + R+ EA +E+G+
Sbjct: 435 IIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG 494
Query: 321 ---VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+VS I G S+ F M+E G P L T S L LC+
Sbjct: 495 CRPTVVSYNILICGLCKAGKFGEASA--------FVKEMLENGWKPDLKTYSILLCGLCR 546
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
K D +E++ + TD+ +N+++ LC+ G+L +A V+ M+ + ++
Sbjct: 547 DRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVT 606
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
YN+LME + A +W M+ G ++ +YN ++ + A+ F +
Sbjct: 607 YNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDAR 666
Query: 498 EKGVAPDATTYTSLLEGL 515
G+ P T+ L+ +
Sbjct: 667 NHGIFPTVYTWNILVRAV 684
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 110/221 (49%), Gaps = 4/221 (1%)
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
+LNA + + + S +F G P L T + L K CK+ + ++ +
Sbjct: 120 LLNAFVEAKQWVKVESLFAYFE---TAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMW 176
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ D+ SY+ +++ L +G+L +A + EM +G+ PDV+ YN L++ +E +
Sbjct: 177 KEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHK 236
Query: 453 PAKKLWDQMFA-SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A +LWD++ S N+KT+NI+IS S+ G ++ L+++ M + D TY+SL
Sbjct: 237 TAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSL 296
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ GLC N+ A VFN+ + +T + CR
Sbjct: 297 IHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR 337
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/461 (21%), Positives = 215/461 (46%), Gaps = 17/461 (3%)
Query: 97 SRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK----FNCEDI 152
+R +A+D V +++ T D Y +I L K +Q+A + + +NC
Sbjct: 140 NRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCS-- 197
Query: 153 GPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS 210
P + N+++ +G +D A +F EM +G+ + + I C+ + + ++
Sbjct: 198 -PNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVA 256
Query: 211 MLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
+L + + ++ + ++I G+C ++EEA ++L ++ +PD + Y ++ +
Sbjct: 257 ILQHMFDK--GVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQY 314
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
+ +G E V + G P + Y + G + + + ++L ++++ +
Sbjct: 315 YCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFE 374
Query: 331 DDVLNALIGSVS---SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
N LI + + ++D A+ F M + G P + + S + LCK + ++ V
Sbjct: 375 HRAFNILICAYAKHGAVD--KAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYH 432
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
+ + + ++ S+ ++ LC+ G ++ + EM +G+ PD F N++M+ C+
Sbjct: 433 FNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCK 492
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
E + A+ +D + G ++ +YN LI + VG+++ +++ M+ G+ PD+ T
Sbjct: 493 EGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWT 552
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
Y SLL G + ++ A ++ + DV +I S M+
Sbjct: 553 YNSLLNGYFKNGRVEDALALYREMFRKDVKFC-AITSNIML 592
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 172/413 (41%), Gaps = 20/413 (4%)
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDN-------ALKMFDEMSHRGVEFS 188
+ A ++F+E+ NS+L V+A + A+ +F+ M GV
Sbjct: 31 EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMM 90
Query: 189 TIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA--- 245
G+ I FC +L + K + N V +I G C G R ++A
Sbjct: 91 AAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQN--VTLNQLIKGLCDGNRTDDAMDM 148
Query: 246 -FKVLDELRIRECKPDFIAYRIVAEEF---KLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
F+ + EL PD +Y + + K E + + +P Y
Sbjct: 149 VFRRMPELGY---TPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNT 205
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKG 360
I G E + +A L ++ D N+LI G + A+ M +KG
Sbjct: 206 VIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKG 265
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
+P T + + + C + +E V + K +S + D+ +Y++++ + C GR EA
Sbjct: 266 VMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEAR 325
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
V M RKG P+ + Y+ L+ + L + L D M G + +NILI +
Sbjct: 326 SVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAY 385
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
++ G ++ A+ F M + G+ PD +Y++++ LC+ ++ A FN+ V+
Sbjct: 386 AKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVS 438
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 205/454 (45%), Gaps = 18/454 (3%)
Query: 75 SQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN 134
Q+PN T YH +L + + + +L + + I + + +I + +
Sbjct: 335 GQKPNST----IYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGA 390
Query: 135 TQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
KA + F E++ N + P++ + +++ +L G +++A+ F++M G+ + I F
Sbjct: 391 VDKAMTAFTEMRQN--GLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISF 448
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
I C + +V + E+ R + ++ I+ CK RV EA D +
Sbjct: 449 TSLIHGLCSIGEWKKVEELAFEMINR--GIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMV 506
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
KPD ++Y + + + +G + E L + +G+ P + Y + G R+
Sbjct: 507 IHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRV 566
Query: 313 CEA----KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTL 368
+A +E+ V + +L+ L + + R + M+++G + T
Sbjct: 567 EDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARE---LYMKMVDRGTQLRIETY 623
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ + LC+ + DE + +++ L + ++ D+ +++++++ L GR+ EA + M
Sbjct: 624 NTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVL 683
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
+G PDV Y+ ++++ E LL + L+ M +GC+ + NI++ + E G++
Sbjct: 684 RGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRR 743
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
A + EK + +A+T +LL + E Q
Sbjct: 744 AGTYLTKIDEKNFSLEAST-AALLIPIVSEKKYQ 776
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/443 (20%), Positives = 196/443 (44%), Gaps = 12/443 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+ +++ Q+ +LK++ + + D Y +I + +A SVF+ +
Sbjct: 272 TYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSM 331
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ I + LL A+ G + + + D M G+ F F + I + ++ +
Sbjct: 332 VRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAV 391
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ ++ E+R +N + V +IH CK RVE+A +++ P+ I++
Sbjct: 392 DKAMTAFTEMR--QNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFT 449
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ +G + E + + G+ P + L E R+ EA++ ++++
Sbjct: 450 SLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHI 509
Query: 326 KFTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
D N LI V +D +I + M+ G P T ++L K + +
Sbjct: 510 GVKPDVVSYNTLIDGYCFVGKMD--ESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVE 567
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
+ + +Y+ + D + N+M+ L +GR+ A + +M +G + YN+++
Sbjct: 568 DALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVL 627
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
C + A ++++ + + +++T++I+I+ +VG I+ A LF M+ +G
Sbjct: 628 GGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPV 687
Query: 503 PDATTYTSLL-----EGLCQETN 520
PD TY+ ++ EGL +E++
Sbjct: 688 PDVITYSLMIKSHIEEGLLEESD 710
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 216/471 (45%), Gaps = 11/471 (2%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
S++ F Q ++ +++ ++++ + SR+ + I VL ++K L +++
Sbjct: 70 SISPQIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFIL 129
Query: 125 IIPSLIQGKNTQKAFSVFNEV--KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM-- 180
I + + +A + F+ + +C+ NS+L V+ +G A K + +
Sbjct: 130 IFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSF-NSVLNVIIQEGDFSYAFKFYLHVFG 188
Query: 181 -SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCK 238
+ +G + + + + + I C KLGQ+ +D R+ N V +++G CK
Sbjct: 189 ANSKGFQPNLLTYNLIIKALC---KLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCK 245
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+RV+EA +LDE++ C P+ + + ++ + G + ++ G P
Sbjct: 246 ERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVT 305
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMI 357
Y I GL ++ ++ +A L E +VS K + +I G V + M
Sbjct: 306 YNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSME 365
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
E+G+ S+L L K KS+ V ++K ++ ++ Y + LC +
Sbjct: 366 ERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPD 425
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
EA ++QEM KG P+ Y+SLM+ ++ + A +W +M + N+ ++L+
Sbjct: 426 EAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLL 485
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ E G + AL ++ +ML +G+ PD Y+S+++GLC ++ ++F
Sbjct: 486 NGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLF 536
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 198/448 (44%), Gaps = 46/448 (10%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN L+Y+ I+K+L QI+ +++ + D Y ++ L + +
Sbjct: 195 QPNL----LTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 250
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+A + +E++ P N L+ L+ +G + A K+ D M +G + + + I
Sbjct: 251 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 310
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C KL + LS+L+++ + + V II+G K +R E+ +L + R
Sbjct: 311 HGLCLKGKLDKALSLLEKMV--SSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERG 368
Query: 257 CKP-DFIAYRIVAEEFKLMGSVFEREVVL-KKKRKLGVAPRTNDYREFILGLIVERRICE 314
K ++I +++ FK S E V L K+ + G P Y FI GL + + E
Sbjct: 369 QKANEYIYSSLISGLFKEGKS--ENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDE 426
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
A +D+L M+ KG +P T S+L K
Sbjct: 427 A---------------EDILQE-------------------MLSKGFLPNAFTYSSLMKG 452
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
K+ S + + V+K + + D ++ +V+++ LC SGRLREA V M +GL PD
Sbjct: 453 FFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPD 512
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFAS--GCSGNLKTYNILISKFSEVGEIEGALRL 492
V Y+S+++ C + KL+ +M ++ TYNIL + + A+ L
Sbjct: 513 VVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDL 572
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETN 520
++ML++G PD+ T LE L + N
Sbjct: 573 LNSMLDEGCDPDSLTCNIFLETLRERIN 600
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 79/146 (54%), Gaps = 2/146 (1%)
Query: 390 VLSAND--YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
V AN + ++ +YN+++ LC G++ A +EM K +PDV Y++LM C+
Sbjct: 186 VFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCK 245
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
E + A L D+M A GC N T+N+LI S+ G++ A +L NM KG P+ T
Sbjct: 246 ERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVT 305
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVN 533
Y +L+ GLC + L A + K V+
Sbjct: 306 YNTLIHGLCLKGKLDKALSLLEKMVS 331
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 131/322 (40%), Gaps = 36/322 (11%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
LII CK +++ A E+ ++ C PD Y +
Sbjct: 203 LIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMN--------------------- 241
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSA 349
GL ERR+ EA L + + + + N LI ++S + D A
Sbjct: 242 --------------GLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRA 287
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ M KG VP T + L LC + K D+ + + + + ++ + +Y +++
Sbjct: 288 AKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIING 347
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
L R + ++ M+ +G + Y+SL+ +E A +LW +M GC N
Sbjct: 348 LVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPN 407
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ Y I + + A + ML KG P+A TY+SL++G ++ + Q A V+
Sbjct: 408 VVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWK 467
Query: 530 KSVNHDVMLARSILSTFMISLC 551
+ ++ D+ S + LC
Sbjct: 468 EMMSQDMRHNVVCCSVLLNGLC 489
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F M K P + T S L LCK + DE V + + A + ++NV++
Sbjct: 217 AVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLID 276
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L +G L A ++ M KG P+ YN+L+ C + L A L ++M +S C
Sbjct: 277 ALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVP 336
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N TY +I+ + E + + +M E+G + Y+SL+ GL +E + A ++
Sbjct: 337 NQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLW 396
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
+ + F+ LCR
Sbjct: 397 KEMAEKGCKPNVVVYGAFIDGLCR 420
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 130/559 (23%), Positives = 234/559 (41%), Gaps = 51/559 (9%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
KW P E+ L L L+ + LV ++ + ++ + FF WA ++ NF H +Y
Sbjct: 75 KWGPDAEKALEVLKLK--VDHRLVRSILE--IDVEINVKIQFFKWAGKRRNFQHDCSTYM 130
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNK-ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
++++ L +R + +++V N +++ +V ++ +L + K KA SVF + K
Sbjct: 131 TLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKG 190
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF-STIGFGVFIWKFCENAKLG 206
NS++ +L +G + +++ EM + G F TI + I + + +
Sbjct: 191 RKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRND 250
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ + DE++ +N M I ++ + K +VE+A + +E++ C P Y
Sbjct: 251 SAIRLFDEMK--DNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTE 308
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRT---NDYREFILGLI--VERRICEAKELGEV 321
+ + G V E K + G+ P N+ ILG + VE E+G
Sbjct: 309 LIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN-ILGKVGRVEELTNVFSEMGMW 367
Query: 322 IVSGKFTIDDDVLNALIGS---------------VSSIDP------------------RS 348
+ + V+ AL S S+ P
Sbjct: 368 RCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEK 427
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A++ M EKG P + +L L K + + E++K L N Y VM+
Sbjct: 428 ALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIK 487
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
G+L EA + EMK +G PDV YN+LM + ++ A L +M +GC
Sbjct: 488 HFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRA 547
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF--- 525
++ ++NI+++ F+ G A+ +F + G+ PD TY +LL + A
Sbjct: 548 DINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMM 607
Query: 526 -EVFNKSVNHDVMLARSIL 543
E+ +K +D + SIL
Sbjct: 608 REMKDKGFEYDAITYSSIL 626
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 193/439 (43%), Gaps = 12/439 (2%)
Query: 82 HSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR------FIIPSLIQGKNT 135
HS +S L + L R+++ + +KV K+ LD R I SL +
Sbjct: 23 HSLVSDGCGLPADLLVRELSKAGRAEECLKVVKLMLDRQQLRERHLVNITIDSLCKSDMI 82
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
KA S F E+K + N L+ ID A+++F EM G ST +
Sbjct: 83 DKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTL 142
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRI 254
I C +LG+ + + +S S I +++ GFCK RV EA ++L+EL
Sbjct: 143 IGGLCRVERLGEAQQFYERLL---SSGAGASFITYNILVDGFCKADRVPEAVELLNELVA 199
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
R Y + + G + E E+ + K GV P+ + I GL R+
Sbjct: 200 RGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVAR 259
Query: 315 AKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
AKE+ + + + + L+ G A F M +G P + + L
Sbjct: 260 AKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILIN 319
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
LCK + + EV++ + D+ +Y+ + LC + R+ +A V+ + KG P
Sbjct: 320 GLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTP 379
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWD-QMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
DV Y +L+ C L A+K+++ M A+GC+ N T N+L++ F G ++ A L
Sbjct: 380 DVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEAREL 439
Query: 493 FHNMLEKGVAPDATTYTSL 511
F +E+GV PD T++++
Sbjct: 440 FQRFVERGVQPDCRTFSAM 458
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 158/397 (39%), Gaps = 47/397 (11%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS----MLDEV 215
++ L G +D AL++F + G + + + + + + L MLD
Sbjct: 5 IVLCLCHVGKLDEALELFHSLVSDGCGLPA---DLLVRELSKAGRAEECLKVVKLMLDRQ 61
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ RE ++N + I CK +++A EL+ + ++Y I+ F
Sbjct: 62 QLRERHLVN------ITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTK 115
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ E + + + G AP T+ Y I GL C + LGE
Sbjct: 116 RIDEAIQLFGEMKAPGCAPSTSTYNTLIGGL------CRVERLGE--------------- 154
Query: 336 ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
A F+ ++ G + T + L CK ++ E VE+ L A
Sbjct: 155 -------------AQQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARG 201
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
YN ++ L G++ EA M++ G+ P + L++ C+ + + AK
Sbjct: 202 GVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAK 261
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+++ SG S ++ + L+ F + G ++ A R+F M +G P+ + L+ GL
Sbjct: 262 EIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGL 321
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
C+ L A EVF + V STFM LCR
Sbjct: 322 CKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCR 358
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/507 (23%), Positives = 223/507 (43%), Gaps = 16/507 (3%)
Query: 31 TPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSI 90
P LE L + G+ ++ L RV+N +L FF WAS+QP + HS +Y ++
Sbjct: 90 VPKLELALQESGV--TMRAGLTERVLNR-CGDAGNLGYRFFVWASKQPGYRHSYENYKAM 146
Query: 91 LKSLSLSRQINAIDSVLKQV-KVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV-KFN 148
+K S RQ A+ ++L+++ K N + + S ++ +I + +KA V +E+ K+
Sbjct: 147 VKIFSKMRQFGAVWALLEEMRKDNSVLITSELFIVLIRRFASARLVEKAIEVLDEMPKYG 206
Query: 149 CEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
CE P+ + LL L +G + A +F++M R S F ++ +C KL
Sbjct: 207 CE---PDEYVFGCLLDALCKNGSVKQAASLFEDMRVR-FSPSLRHFTSLLYGWCREGKLI 262
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ +L V+ RE V+ ++ + ++ +AF +L E+ + C+P+ +Y I
Sbjct: 263 EAKHVL--VQMREAGFEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRKGCEPNANSYTI 320
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS-G 325
+ + F + E V + + G Y I G +I ++ + + G
Sbjct: 321 MIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALISGFCKWGKINRGYQILDAMKQKG 380
Query: 326 KFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
L L+ + + M G VP LS + + + CK + + V
Sbjct: 381 HMPNQLTYLRILLAHEKKEELEECLELIESMRMVGCVPDLSIYNVVIRLACKLGEVKQGV 440
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL--DPDVSFYNSLME 443
+++ + A+D+ +++++ +M+ G L EA +EM +GL P L+
Sbjct: 441 QIWNEMEASDFSPELDTFVIMIHGFLGQGCLVEACEYFKEMIGRGLLTTPQYGILKELLN 500
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
A R + L AK +W + GC N + I I G ++ A +M+E + P
Sbjct: 501 ALLRGEKLGMAKDVWSCIVTKGCELNADAWTIWIHSLFSNGHVKEACSYCLDMMEADIMP 560
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNK 530
T+ L+ GL + N + A E+ K
Sbjct: 561 KPETFAKLMRGLRKLYNREFAAEITEK 587
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 177/373 (47%), Gaps = 9/373 (2%)
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G S + + F + + G V ++L+E+RK +NS++ S + +++I F + VE
Sbjct: 135 GYRHSYENYKAMVKIFSKMRQFGAVWALLEEMRK-DNSVLITSELFIVLIRRFASARLVE 193
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
+A +VLDE+ C+PD + + + GSV ++ L + ++ +P + +
Sbjct: 194 KAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSV-KQAASLFEDMRVRFSPSLRHFTSLL 252
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRV 362
G E ++ EAK + + F D V N L+ + S + A M+ KG
Sbjct: 253 YGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRKGCE 312
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P ++ + + + C + K DE + V+ + D+ +Y ++S C G++ Y +
Sbjct: 313 PNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALISGFCKWGKINRGYQI 372
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ MK+KG P+ Y ++ A +++ L +L + M GC +L YN++I +
Sbjct: 373 LDAMKQKGHMPNQLTYLRILLAHEKKEELEECLELIESMRMVGCVPDLSIYNVVIRLACK 432
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
+GE++ +++++ M +P+ T+ ++ G + L A E F + M+ R +
Sbjct: 433 LGEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLGQGCLVEACEYFKE------MIGRGL 486
Query: 543 LSTFMISLCRRVL 555
L+T + + +L
Sbjct: 487 LTTPQYGILKELL 499
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 220/499 (44%), Gaps = 48/499 (9%)
Query: 66 LALGFFNWASQQPNFTHSPLSY----HSILKS--------------LSLSRQINAIDSVL 107
LAL FFN+ NF HS S+ HS+L++ L ++
Sbjct: 85 LALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFWPASSLLQTLLLRGLNPHQIFENFF 144
Query: 108 KQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEI--CNSLLAV 163
+ K K + SS + +I +Q K V N ++ D G PE+ ++LL
Sbjct: 145 ESYKKYKFS-SSSGFDMLIQHYVQNKRVMDGVLVVNLMR----DYGLLPEVRTLSALLNA 199
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
LA L++FD + + GV+ + V + CE + ++++ S+
Sbjct: 200 LARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSL- 258
Query: 224 NGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVA------EEFKLMGS 276
S++ + I+G CK KRV EA +V L + K D + Y + +EF++
Sbjct: 259 --SIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGME 316
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD--VL 334
+ + + +LG P I GLI I A EL + GK + + V
Sbjct: 317 MMDEMI------ELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKV--GKLGVVPNLFVY 368
Query: 335 NALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N++I S+ A + F+ M E+G P T + L +R K D + +
Sbjct: 369 NSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIE 428
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ SYN M++ C G+++ A + +EM KGL P V+ Y SL+ C++ L+
Sbjct: 429 CGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPK 488
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A KL+ +M G + N T+ LI ++ ++ A +LF M+E + P+ TY L+E
Sbjct: 489 AFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIE 548
Query: 514 GLCQETNLQAAFEVFNKSV 532
G C+E N AFE+ ++ +
Sbjct: 549 GHCREGNTTRAFELLDEMI 567
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 181/433 (41%), Gaps = 44/433 (10%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
SL++ DG + A K++ EM+ +G+ +T+ F I C+ K+ + + DE+
Sbjct: 475 SLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMV-- 532
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
E ++ V ++I G C+ AF++LDE+ + PD YR + G V
Sbjct: 533 ELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVS 592
Query: 279 E-REVVLKKKRKLGVAPRTND--YREFILGLIVERRICEA-----KELGE---------- 320
E +E + K R ++ Y + G E RI EA + +G
Sbjct: 593 EAKEFINDLHHK---HQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYA 649
Query: 321 VIVSGKFTIDDDVLNALI--------------------GSVSSIDPRSAIVFFNFMIEKG 360
V++SG +D +L L+ G + S + + A F+ MI +G
Sbjct: 650 VLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEG 709
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
VP T + L L K +E ++K + + + +Y + L G + A
Sbjct: 710 YVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENAL 769
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+ M + V+ YN L+ C+ + A KL D M G + TY+ I ++
Sbjct: 770 QLHNAMLQGSFANTVT-YNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEY 828
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
+ G ++ A+ ++ ML++G+ PD + L+ C L A ++ N + + +
Sbjct: 829 CKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQ 888
Query: 541 SILSTFMISLCRR 553
S + M+ L +R
Sbjct: 889 STYHSLMVQLAQR 901
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 183/463 (39%), Gaps = 57/463 (12%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSH 182
+I LI+ + + AF + N+V + P + NS++ L G ++ A +F M+
Sbjct: 336 LIEGLIKMGSIEGAFELLNKV--GKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAE 393
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-----IIHGFC 237
RG+ + + + + I F AKL D N MI + A + +I+ C
Sbjct: 394 RGLNPNDVTYTILIDGFGRRAKL-------DVAFYYFNKMIECGISATVYSYNSMINCQC 446
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K +++ A + E+ + KP Y + + G V + + + G+AP T
Sbjct: 447 KFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTV 506
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFM 356
+ I GL ++ EA +L + +V K ++ N LI G + A + M
Sbjct: 507 TFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEM 566
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
I+KG P T L LC + E E L D Y ++ C GR+
Sbjct: 567 IKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRI 626
Query: 417 REA----------------------------------YGVIQEMKRKGLDPDVSFYNSLM 442
+EA + +++EM KG+ PD Y L+
Sbjct: 627 KEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILI 686
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+ + L+ A + W M G N TY L++ + G + A LF ML
Sbjct: 687 DGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAI 746
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
P+ TY L+ L +E N++ A ++ H+ ML S +T
Sbjct: 747 PNHITYGCFLDHLTKEGNMENALQL------HNAMLQGSFANT 783
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/409 (18%), Positives = 161/409 (39%), Gaps = 74/409 (18%)
Query: 181 SHRGVEFSTI-GFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
S++ +FS+ GF + I + +N ++ + +++ +R + ++ +++ +
Sbjct: 146 SYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMR--DYGLLPEVRTLSALLNALARI 203
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
++ + ++ D L KPD Y +V + + + + ++ + G + Y
Sbjct: 204 RKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTY 263
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIE 358
FI GL +R+ EA E+ + D L+ + I + + MIE
Sbjct: 264 NVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIE 323
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
G VP+ + +S L + L K G +
Sbjct: 324 LGYVPSEAAVSGLIEGLIKM-----------------------------------GSIEG 348
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A+ ++ ++ + G+ P++ YNS++ + C+ L A+ L+ M G + N TY ILI
Sbjct: 349 AFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILID 408
Query: 479 KFS-----------------------------------EVGEIEGALRLFHNMLEKGVAP 503
F + G+++ A LF M++KG+ P
Sbjct: 409 GFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKP 468
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
TYTSL+ G C++ + AF+++++ + + + LC+
Sbjct: 469 TVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQ 517
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 130/559 (23%), Positives = 234/559 (41%), Gaps = 51/559 (9%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
KW P E+ L L L+ + LV ++ + ++ + FF WA ++ NF H +Y
Sbjct: 75 KWGPDAEKALEVLKLK--VDHRLVRSILE--IDVEINVKIQFFKWAGKRRNFQHDCSTYM 130
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNK-ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
++++ L +R + +++V N +++ +V ++ +L + K KA SVF + K
Sbjct: 131 TLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKG 190
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF-STIGFGVFIWKFCENAKLG 206
NS++ +L +G + +++ EM + G F TI + I + + +
Sbjct: 191 RKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRND 250
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ + DE++ +N M I ++ + K +VE+A + +E++ C P Y
Sbjct: 251 SAIRLFDEMK--DNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTE 308
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRT---NDYREFILGLI--VERRICEAKELGEV 321
+ + G V E K + G+ P N+ ILG + VE E+G
Sbjct: 309 LIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN-ILGKVGRVEELTNVFSEMGMW 367
Query: 322 IVSGKFTIDDDVLNALIGS---------------VSSIDP------------------RS 348
+ + V+ AL S S+ P
Sbjct: 368 RCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEK 427
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A++ M EKG P + +L L K + + E++K L N Y VM+
Sbjct: 428 ALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIK 487
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
G+L EA + EMK +G PDV YN+LM + ++ A L +M +GC
Sbjct: 488 HFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRA 547
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF--- 525
++ ++NI+++ F+ G A+ +F + G+ PD TY +LL + A
Sbjct: 548 DINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMM 607
Query: 526 -EVFNKSVNHDVMLARSIL 543
E+ +K +D + SIL
Sbjct: 608 REMKDKGFEYDAITYSSIL 626
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 198/448 (44%), Gaps = 11/448 (2%)
Query: 88 HSI-LKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
H++ +KS ++ + + +L+ + + Y ++ L + A +F+E+
Sbjct: 48 HTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEML 107
Query: 147 FNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
D+ P++ N++L L G I + + ++ RG+ + ++I CE +
Sbjct: 108 R--RDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGR 165
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
L + +++++ + ++ I V+ ++ G CK +V+EA + L + + C PD
Sbjct: 166 LEEAVALVESM----DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFT 221
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + + + E +LK G P Y I GL E + A EL
Sbjct: 222 YNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQ 281
Query: 324 SGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+ D V N+L+ G A+ N M+E G P + T + + LCK
Sbjct: 282 AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNIS 341
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
+ V Y D+ ++N M+ C +L A +++ M G+ PD YNS++
Sbjct: 342 DAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVL 401
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
C+ + + +++M GC N TYNILI F ++ ++E A + M + G+
Sbjct: 402 NGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLV 461
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNK 530
PD ++ +L+ G C+ +L A+ +F K
Sbjct: 462 PDTISFNTLIHGFCRNGDLDGAYLLFQK 489
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 197/445 (44%), Gaps = 12/445 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+++++L +L I ++L +V ++++ I L +G ++A ++ +
Sbjct: 117 TFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM 176
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
I P++ N+L+ L D + A + M ++G + I +C+
Sbjct: 177 D---AYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRD 233
Query: 204 KLGQVLSML-DEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L + +L D + K + V +I+G C VE A ++ +E + ++ KPD +
Sbjct: 234 MLQEATELLKDAIFK---GFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLV 290
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE-LGEV 321
Y + + G + V+ + + G P Y I GL I +A + +
Sbjct: 291 VYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDA 350
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
IV G + D N +I G + SA+ M G P T +++ LCK K
Sbjct: 351 IVKG-YLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGK 409
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+ E+ E ++ + + +YN+++ C +L EA GVI M + GL PD +N+
Sbjct: 410 AKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNT 469
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L+ CR L A L+ ++ G S T+NILI +S ++ A ++F M+ KG
Sbjct: 470 LIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKG 529
Query: 501 VAPDATTYTSLLEGLCQETNLQAAF 525
PD TY L++G C+ N+ A+
Sbjct: 530 YKPDLYTYRVLVDGSCKAANVDRAY 554
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 181/412 (43%), Gaps = 15/412 (3%)
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
F C P N+++ L + Y D A K++ M GV V I FC +
Sbjct: 4 FGCPPAAPAY-NAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPH 62
Query: 207 QVLSMLDEVRKRE---NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
L +L + +R + +V+ L HG +A + DE+ R+ PD
Sbjct: 63 VALRLLRSLPERGCDVKPLAYCTVVRGLYAHG-----HGYDARHLFDEMLRRDVFPDVAT 117
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+ V G + E +L K K G++ +I GL R+ EA L E
Sbjct: 118 FNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVE--- 174
Query: 324 SGKFTIDDDVL--NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
S I DV+ N L+ G + A + M+ +G +P T + + CKR+
Sbjct: 175 SMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDM 234
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
E E+ K + D +Y +++ LC G + A + E + K L PD+ YNS
Sbjct: 235 LQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNS 294
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L++ CR+ L+ A ++ ++M GC ++ TYNI+I+ ++G I A + ++ + KG
Sbjct: 295 LVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKG 354
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
PD T+ ++++G C+ L +A ++ + + + ++ + LC+
Sbjct: 355 YLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCK 406
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/469 (23%), Positives = 205/469 (43%), Gaps = 6/469 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y++I+ +L + + V ++ + D+ + I S A + +
Sbjct: 12 AYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSL 71
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
D+ P +++ L + G+ +A +FDEM R V F + C+ +
Sbjct: 72 PERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDI 131
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ ++L +V KR S+ + I G C+G R+EEA +++ + PD + Y
Sbjct: 132 MESGALLAKVLKRGMSV--NKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVTYN 188
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ V E L++ G P Y I G + EA EL + +
Sbjct: 189 TLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFK 248
Query: 326 KFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
F D +LI G + D A+ FN K P L ++L K LC++
Sbjct: 249 GFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHA 308
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
++V + + D+ +YN++++ LC G + +A V+ + KG PDV +N++++
Sbjct: 309 LQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDG 368
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C+ L A +L ++M+ G + + TYN +++ + G+ + F M+ KG P+
Sbjct: 369 YCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPN 428
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI-LSTFMISLCR 552
A TY L+E C+ L+ A V + ++ D ++ +I +T + CR
Sbjct: 429 AITYNILIENFCKINQLEEASGVIVR-MSQDGLVPDTISFNTLIHGFCR 476
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 9/209 (4%)
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE----LVEVYKVLSANDYFTDMESYNVMV 407
F+ M+ + P ++T +N+ LC++ E L +V K + + FT N+ +
Sbjct: 102 LFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFT----CNIWI 157
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
LC GRL EA +++ M + PDV YN+LM C++ ++ A + +M GC
Sbjct: 158 RGLCEGGRLEEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCI 216
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
+ TYN +I + + ++ A L + + KG PD TY SL+ GLC E +++ A E+
Sbjct: 217 PDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALEL 276
Query: 528 FNKSVNHDVMLARSILSTFMISLCRRVLI 556
FN++ D+ + ++ + LCR+ LI
Sbjct: 277 FNEAQAKDLKPDLVVYNSLVKGLCRQGLI 305
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 152/361 (42%), Gaps = 9/361 (2%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F ++Y S++ L + + + + + D VY ++ L + A
Sbjct: 249 GFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHA 308
Query: 139 FSVFNE-VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
V NE V+ C P+I N ++ L G I +A + ++ +G F
Sbjct: 309 LQVMNEMVEDGCH---PDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTM 365
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
I +C+ KL L +++ R + ++ +++G CK + +E + +E+ ++
Sbjct: 366 IDGYCKRLKLDSALQLVE--RMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILK 423
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
C+P+ I Y I+ E F + + E V+ + + G+ P T + I G + A
Sbjct: 424 GCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGA 483
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSS-IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
L + + ++ D N LIG+ SS ++ + A F MI KG P L T L
Sbjct: 484 YLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDG 543
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
CK D + + + M ++ +++ L + R+ EA +I M R G+ P+
Sbjct: 544 SCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPE 603
Query: 435 V 435
V
Sbjct: 604 V 604
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 208/448 (46%), Gaps = 16/448 (3%)
Query: 98 RQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK----FNCEDIG 153
R +A+D V +++ T D Y +I L K +Q+A + + +NC
Sbjct: 144 RTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCS--- 200
Query: 154 PEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM 211
P + + +++ +G +D A +FDEM +G + + I C+ + + ++
Sbjct: 201 PNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAI 260
Query: 212 LDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
L + + M N ++I G+C ++EEA ++L ++ +PD + Y ++ + +
Sbjct: 261 LQHMFDK-GVMPNTRTYNIMI-RGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYY 318
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
+G E V + G P + Y + G + + + ++L ++++ +
Sbjct: 319 CKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEH 378
Query: 332 DVLNALIGSVS---SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
N LI + + ++D A+ F M + G P + + S + LCK + ++ V +
Sbjct: 379 RAFNILICAYAKHGAVD--KAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHF 436
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+ + ++ S+ ++ LC+ G ++ + EM +G+ PD F N++M+ C+E
Sbjct: 437 NQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKE 496
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
+ A+ +D + G N+ +YN LI + VG+++ +++ F M+ G+ PD+ TY
Sbjct: 497 GRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTY 556
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+LL G + ++ A ++ + DV
Sbjct: 557 NALLNGYFKNGRVEDALALYREMFRKDV 584
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 174/416 (41%), Gaps = 23/416 (5%)
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDN-------ALKMFDEMSHRGVEFS 188
+ A ++F+E+ NS+L V+A + A+ +F+ M+ GV
Sbjct: 31 EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMM 90
Query: 189 TIG---FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
G+ I FC +L + K + N V +I G C GKR ++A
Sbjct: 91 AANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQN--VTLNQLIKGLCDGKRTDDA 148
Query: 246 ----FKVLDELRIRECKPDFIAYRIVAEEF---KLMGSVFEREVVLKKKRKLGVAPRTND 298
F+ + EL PD +Y + + K E + + +P
Sbjct: 149 MDMVFRRMPELGY---TPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVS 205
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMI 357
Y I G E + +A L + ++ F D ++LI G + A M
Sbjct: 206 YSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMF 265
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+KG +P T + + + C + +E V + K +S + D+ +Y +++ + C GR
Sbjct: 266 DKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCA 325
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
EA V M RKG P+ + Y+ L+ + L + L D M G + +NILI
Sbjct: 326 EARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILI 385
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
+++ G ++ A+ F M + G+ PD +Y++++ LC+ ++ A FN+ V+
Sbjct: 386 CAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVS 441
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/454 (20%), Positives = 203/454 (44%), Gaps = 18/454 (3%)
Query: 75 SQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN 134
Q+PN T YH +L + + + +L + + I + + +I + +
Sbjct: 338 GQKPNST----IYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGA 393
Query: 135 TQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
KA + F E++ N + P++ + +++ +L G +++A+ F++M G+ + I F
Sbjct: 394 VDKAMTAFTEMRQN--GLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISF 451
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
I C + +V + E+ R + ++ I+ CK RV EA D +
Sbjct: 452 TSLIHGLCSIGEWKKVEELAFEMINR--GIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMV 509
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
KP+ ++Y + + + +G + E + +G+ P + Y + G R+
Sbjct: 510 IHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRV 569
Query: 313 CEA----KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTL 368
+A +E+ V + +L+ L + + R + M+++G + T
Sbjct: 570 EDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARE---LYMKMVDRGTQLRIETY 626
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ + LC+ + DE + +++ L + ++ D+ ++N++++ L GR+ EA + M
Sbjct: 627 NTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVL 686
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
+G P V Y+ ++++ E LL + L+ M +GC+ + N++I + E G++
Sbjct: 687 RGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRR 746
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
A + EK + +A+T +LL + E Q
Sbjct: 747 AGTYLTKIDEKNFSVEAST-AALLIPIVSEKKYQ 779
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/446 (19%), Positives = 196/446 (43%), Gaps = 7/446 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+ +++ Q+ +LK++ + + D Y +I + +A SVF+ +
Sbjct: 275 TYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSM 334
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ I + LL A+ G + + + D M G+ F F + I + ++ +
Sbjct: 335 VRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAV 394
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ ++ E+R +N + V +IH CK RVE+A +++ P+ I++
Sbjct: 395 DKAMTAFTEMR--QNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFT 452
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ +G + E + + G+ P + L E R+ EA++ ++++
Sbjct: 453 SLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHI 512
Query: 326 KFTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+ N LI V +D +I F+ M+ G P T + L K + +
Sbjct: 513 GVKPNVVSYNTLIDGYCFVGKMD--ESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVE 570
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
+ + +Y+ + D + N+++ L +GR+ A + +M +G + YN+++
Sbjct: 571 DALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVL 630
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
C + A ++++ + + ++ T+NI+I+ +VG I+ A LF M+ +G
Sbjct: 631 GGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPV 690
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVF 528
P TY+ +++ +E L+ + ++F
Sbjct: 691 PHVITYSLMIKSRIEEGLLEESDDLF 716
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/495 (18%), Positives = 206/495 (41%), Gaps = 28/495 (5%)
Query: 57 NPYLLTHHSLALGFFNWASQQP-----------NFTHSPLSYHSILKSLSLSRQINAIDS 105
+P ++++ ++ GFF F ++Y S++ L ++ +N ++
Sbjct: 200 SPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEA 259
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAV-- 163
+L+ + + ++ Y +I ++A + K + + P++ +L +
Sbjct: 260 ILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLK--KMSGSGLQPDVVTYILLIQY 317
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
G A +FD M +G + ++ + + + + L V +LD + R+
Sbjct: 318 YCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLD-LMIRDGIPF 376
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
+LI + K V++A E+R +PD ++Y V +G V +
Sbjct: 377 EHRAFNILIC-AYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYH 435
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
+ G++P + I GL + +EL +++ D +N ++ ++
Sbjct: 436 FNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCK 495
Query: 344 IDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ R A FF+ +I G P + + + L C K DE ++ + + + D
Sbjct: 496 -EGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSW 554
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF----YNSLMEACCREDLLRPAKKL 457
+YN +++ +GR+ +A + +EM RK DV F N ++ + + A++L
Sbjct: 555 TYNALLNGYFKNGRVEDALALYREMFRK----DVKFCAITSNIILHGLFQAGRIVAAREL 610
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ +M G ++TYN ++ E ++ ALR+F ++ K D T+ ++ L +
Sbjct: 611 YMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLK 670
Query: 518 ETNLQAAFEVFNKSV 532
+ A +F+ V
Sbjct: 671 VGRIDEAKSLFSAMV 685
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 164/379 (43%), Gaps = 13/379 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ A G +D A+ F EM G+ + + I C K+G+V + +
Sbjct: 382 NILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILC---KIGRVEDAVYHFNQ 438
Query: 218 RENSMINGSVIAVL-IIHGFC---KGKRVEE-AFKVLDELRIRECKPDFIAYRIVAEEFK 272
+ ++ ++I+ +IHG C + K+VEE AF++++ R PD I + +
Sbjct: 439 MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMIN----RGIHPDAIFMNTIMDNLC 494
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
G V E + +GV P Y I G ++ E+ + + +VS D
Sbjct: 495 KEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSW 554
Query: 333 VLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
NAL+ G + A+ + M K T + + L + + E+Y +
Sbjct: 555 TYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKM 614
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+E+YN ++ LC + + EA + ++++ K + DV +N ++ A + +
Sbjct: 615 VDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRI 674
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
AK L+ M G ++ TY+++I E G +E + LF +M + G A D+ +
Sbjct: 675 DEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVI 734
Query: 512 LEGLCQETNLQAAFEVFNK 530
+ L ++ +++ A K
Sbjct: 735 IRRLLEKGDVRRAGTYLTK 753
>gi|326493764|dbj|BAJ85344.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 124/517 (23%), Positives = 233/517 (45%), Gaps = 37/517 (7%)
Query: 25 RPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP 84
R ++W P + L +L + P+LVA V+ + LAL FF+WA +Q F H
Sbjct: 106 RRHQRWGPPVIADLSKL---RRVPPTLVAEVLCAHPPPPPPLALPFFHWAGRQKGFRHCF 162
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++H++ LS + A D + ++ + + ++ + +A
Sbjct: 163 PAFHALACLLSAAGLPAAADQLPDLIRSHGKPVSHPQLTLLVRLHTAARRPLRALYTLR- 221
Query: 145 VKFNCE-DIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+F E + P++ CN +L L + GY+++ALK+FDEM+ G+ + F + + +
Sbjct: 222 -RFRHEFSVQPQVHVCNRVLGALTAAGYVEDALKLFDEMAESGIRPMPVSFAIIVRALGQ 280
Query: 202 NAKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
K ++L M+ +R R + + +++ ++ G +G +V +E+ +
Sbjct: 281 EGKPERILEMIGRMRDEVCRPDVFVYTTLVKTMVRRGHMEG-----CIRVWEEMGRDGVE 335
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD +AY + E G V + + + RK G+ Y + G + R+ + +
Sbjct: 336 PDSMAYATMVEGLCNAGMVEKAAKLFEGMRKKGLLVDRIVYASLVHGYVAAGRVGDGCRV 395
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ +V + D N LIG + I A F ++++ VP+ T+S L +C
Sbjct: 396 LKDMVDAGYRADLKTYNILIGGLCGIGLEDKAHKMFQIVLQEDLVPSAETVSQLL--VCY 453
Query: 378 RNKS---------DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ D+LVE+ L A ++ D + F GR +A V + +++
Sbjct: 454 ADNGDMVNFFGLVDKLVEL--SLPAVEFLVDF-----LRLFASKDGRELKAVEVFKTLRQ 506
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS-GCSGNLKTYNILISKFSEVGEIE 487
KG V+FYN L+E + A L+++M S C TY+++I F + G IE
Sbjct: 507 KGYC-SVNFYNILIENLLKIKEREKALLLFEEMKDSDDCEPESCTYSLMIPCFVDEGNIE 565
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
A +++M++ P + Y SL++GLC+ + AA
Sbjct: 566 EACSCYNSMMKAEWIPSLSAYRSLVKGLCKIGEINAA 602
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 98/217 (45%), Gaps = 1/217 (0%)
Query: 333 VLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
V N ++G++++ A+ F+ M E G P + + + + L + K + ++E+ +
Sbjct: 235 VCNRVLGALTAAGYVEDALKLFDEMAESGIRPMPVSFAIIVRALGQEGKPERILEMIGRM 294
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
D+ Y +V + G + V +EM R G++PD Y +++E C ++
Sbjct: 295 RDEVCRPDVFVYTTLVKTMVRRGHMEGCIRVWEEMGRDGVEPDSMAYATMVEGLCNAGMV 354
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A KL++ M G + Y L+ + G + R+ +M++ G D TY L
Sbjct: 355 EKAAKLFEGMRKKGLLVDRIVYASLVHGYVAAGRVGDGCRVLKDMVDAGYRADLKTYNIL 414
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
+ GLC A ++F + D++ + +S ++
Sbjct: 415 IGGLCGIGLEDKAHKMFQIVLQEDLVPSAETVSQLLV 451
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 80/171 (46%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + + L K + +R + + V++ + + D +Y MV LC +G + +A +
Sbjct: 301 PDVFVYTTLVKTMVRRGHMEGCIRVWEEMGRDGVEPDSMAYATMVEGLCNAGMVEKAAKL 360
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ M++KGL D Y SL+ + ++ M +G +LKTYNILI
Sbjct: 361 FEGMRKKGLLVDRIVYASLVHGYVAAGRVGDGCRVLKDMVDAGYRADLKTYNILIGGLCG 420
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
+G + A ++F +L++ + P A T + LL ++ F + +K V
Sbjct: 421 IGLEDKAHKMFQIVLQEDLVPSAETVSQLLVCYADNGDMVNFFGLVDKLVE 471
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 58/136 (42%)
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
LR Y + + + P V N ++ A + A KL+D+M SG ++ I
Sbjct: 214 LRALYTLRRFRHEFSVQPQVHVCNRVLGALTAAGYVEDALKLFDEMAESGIRPMPVSFAI 273
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
++ + G+ E L + M ++ PD YT+L++ + + +++ V+ +
Sbjct: 274 IVRALGQEGKPERILEMIGRMRDEVCRPDVFVYTTLVKTMVRRGHMEGCIRVWEEMGRDG 333
Query: 536 VMLARSILSTFMISLC 551
V +T + LC
Sbjct: 334 VEPDSMAYATMVEGLC 349
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 177/374 (47%), Gaps = 3/374 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L +G + +A+ + D M G + + + +G + C++ + + +L ++ +
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R+ + +V +II G CK ++ AF + +E+ I+ K D I Y + F G
Sbjct: 241 RKIKL--DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ +L+ K + P + I + E ++ EA+EL + ++ + D +L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G A + M+ KG P + T + L CK N D+ +E+++ +S
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D +YN ++ C G+L A + QEM + + PD+ Y L++ C A +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+++++ S ++ YNI+I +++ A LF ++ KGV PD TY ++ GLC
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 517 QETNLQAAFEVFNK 530
++ +L A +F K
Sbjct: 539 KKGSLSEADLLFRK 552
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 173/380 (45%), Gaps = 7/380 (1%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L +V+A D L + +M +G+ + + I C KL S + ++ K
Sbjct: 78 LFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLG 137
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+V +I+G C RV EA +++D + KP I + L G V +
Sbjct: 138 YE--PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSD 195
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+++ + + G P Y + + + A EL + K +D + +I
Sbjct: 196 AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIID 255
Query: 340 SV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ S+D +A FN M KG + + L + C + D+ ++ + +
Sbjct: 256 GLCKDGSLD--NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ +++ ++ G+LREA + +EM ++G+ PD Y SL++ C+E+ L A
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ D M + GC N++T+NILI+ + + I+ L LF M +GV D TY +L++G C
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 517 QETNLQAAFEVFNKSVNHDV 536
+ L+ A E+F + V+ V
Sbjct: 434 ELGKLEVAKELFQEMVSRRV 453
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 171/371 (46%), Gaps = 13/371 (3%)
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
NEV + GP +L V+ G A+++ +M R ++ + + + I C++
Sbjct: 211 NEVTY-----GP-----VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD 260
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L ++ +E+ + +I +I GFC R ++ K+L ++ R+ PD +
Sbjct: 261 GSLDNAFNLFNEMEIK--GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
A+ + + F G + E E + K+ + G++P T Y I G E ++ +A + +++
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 323 VSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
VS + N LI G + + F M +G V T + L + C+ K
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+ E+++ + + D+ SY +++ LC +G +A + +++++ ++ D+ YN +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ C + A L+ + G ++KTYNI+I + G + A LF M E G
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 502 APDATTYTSLL 512
+P+ TY L+
Sbjct: 559 SPNGCTYNILI 569
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/475 (22%), Positives = 206/475 (43%), Gaps = 47/475 (9%)
Query: 51 LVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQV 110
L +V + LL + GF QPN ++Y +LK + S Q +L+++
Sbjct: 189 LNGKVSDAVLLIDRMVETGF------QPN----EVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 111 KVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYI 170
+ KI LD+ Y II L + + AF++FNE++ I +L+ G
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D+ K+ +M R + + F I F + KL + + E+ +R S +V
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS--PDTVTYT 356
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I GFCK ++++A +LD + + C P+ + I+ + + + + +K
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
GV T Y I G ++ AKEL + +VS + R I
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV-------------------RPDI 457
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
V + +++ LC + ++ +E+++ + + D+ YN+++ +
Sbjct: 458 VSYKILLD---------------GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C + ++ +A+ + + KG+ PDV YN ++ C++ L A L+ +M G S N
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
TYNILI G+ + +L + G + DA+T +++ L + L+ +F
Sbjct: 563 CTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRLKKSF 616
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 93/213 (43%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ I A+ F M P L S L + + + D ++++ K + +
Sbjct: 47 GIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHN 106
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ + ++M++ C +L A+ + ++ + G +PD +++L+ C E + A +L D
Sbjct: 107 LYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVD 166
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M G L T N L++ G++ A+ L M+E G P+ TY +L+ +C+
Sbjct: 167 RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSG 226
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A E+ K + L S + LC+
Sbjct: 227 QTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 213/469 (45%), Gaps = 16/469 (3%)
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
F ASQ ++ +++S++++ + S + V ++K + + + +
Sbjct: 67 FKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYG 126
Query: 131 QGKNTQKAFSVFNEV--KFNCEDIGPEICNSLLAVLASDGYIDNALKMFD--EMSHRGVE 186
+ +KA +F + +F C NS+L V+ +G AL+ ++ +
Sbjct: 127 KAHLPEKAIELFGRMVDEFQCRRTVRSF-NSVLNVIIQEGLFHRALEFYECGVGGKTNIS 185
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGFCKGKRVEEA 245
+ + F + I C KLG V ++ R+ V ++ G CK R++EA
Sbjct: 186 PNVLSFNLVIKAMC---KLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEA 242
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
+LDE++I C P + + ++ G + ++ G P Y I G
Sbjct: 243 VLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIING 302
Query: 306 LIVERRICEAKELGEVIVSGKFTIDD----DVLNALIGSVSSIDPRSAIVFFNFMIEKGR 361
L ++ ++ +A L + +V+ K +D ++N L+ S+D + + + E+G
Sbjct: 303 LCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVD---GVHLLSSLEERGH 359
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
S L L K KS+E + ++K + ++ Y+ ++ LC G+L EA
Sbjct: 360 HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKE 419
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
++ EM KG P+ Y+SL++ + + A ++W +M + C N Y++LI
Sbjct: 420 ILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC 479
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
E G++ A+ ++ +ML +G+ PD Y+S++ GLC +++ ++FN+
Sbjct: 480 EDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNE 528
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 182/405 (44%), Gaps = 11/405 (2%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFN-CEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
+ +I ++ + +A VF E+ CE C +L+ L + ID A+ + DEM
Sbjct: 191 FNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYC-TLMDGLCKEDRIDEAVLLLDEM 249
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
G S++ F V I C+ + +V ++D + + + V II+G C
Sbjct: 250 QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLK--GCVPNEVTYNTIINGLCLKG 307
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
++++A +LD + +C P+ + Y + G + +L + G Y
Sbjct: 308 KLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYS 367
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRSAIVFFNFMI 357
I GL E + EA L + +V + V +ALI + +D I+ M+
Sbjct: 368 TLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCE--MV 425
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
KG P T S+L K K S + + V+K ++ N+ + Y+V++ LC G+LR
Sbjct: 426 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLR 485
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA--SGCSGNLKTYNI 475
EA + M +GL PDV Y+S++ C + KL+++M S ++ TYNI
Sbjct: 486 EAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNI 545
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
L+ + I A+ L ++ML++G PD T L L ++ N
Sbjct: 546 LLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLN 590
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 163/375 (43%), Gaps = 5/375 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N ++ + G +D A+++F EM+ + E + + C+ ++ + + +LDE++
Sbjct: 192 NLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQI 251
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
SV ++I+G CK + K++D + ++ C P+ + Y + L G +
Sbjct: 252 E--GCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL 309
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ +L + P Y I GL+ + R + L + ++ + L
Sbjct: 310 DKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTL 369
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G A+ + M+EKG P + S L LC+ K DE E+ +
Sbjct: 370 ISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGC 429
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ +Y+ ++ +G ++A V +EM + P+ Y+ L+ C + LR A
Sbjct: 430 TPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMM 489
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML--EKGVAPDATTYTSLLEG 514
+W M G ++ Y+ +I G +E L+LF+ ML E PD TY LL
Sbjct: 490 MWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRA 549
Query: 515 LCQETNLQAAFEVFN 529
LC++ ++ A ++ N
Sbjct: 550 LCKQNSISHAIDLLN 564
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 111/258 (43%), Gaps = 40/258 (15%)
Query: 315 AKELGEVIVSGKFTIDDDVL--NALIGSVSSID--PRSAIVFFNFMIEKGRVPTLSTLSN 370
A E E V GK I +VL N +I ++ + R+ VF I+K P + T
Sbjct: 170 ALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCE-PDVFTYCT 228
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LCK ++ DE V + + F ++NV+++ LC G + ++ M KG
Sbjct: 229 LMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKG 288
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG------ 484
P+ YN+++ C + L A L D+M AS C N TY LI+ + G
Sbjct: 289 CVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGV 348
Query: 485 -----------------------------EIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ E A+ L+ M+EKG P+ Y++L++GL
Sbjct: 349 HLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGL 408
Query: 516 CQETNLQAAFEVFNKSVN 533
C+E L A E+ + VN
Sbjct: 409 CREGKLDEAKEILCEMVN 426
>gi|115445813|ref|NP_001046686.1| Os02g0321000 [Oryza sativa Japonica Group]
gi|113536217|dbj|BAF08600.1| Os02g0321000 [Oryza sativa Japonica Group]
Length = 542
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 191/420 (45%), Gaps = 16/420 (3%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG-----PEI-C-NSLLAVLASDGYIDNAL 174
Y + +L + + +VF E+K D G P + C N+L+ LA G AL
Sbjct: 59 YNVAMKALALAGDLDEVVAVFAELKRTAADGGDGGAPPNVLCYNTLVNALAEAGREGEAL 118
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIH 234
K FDEM GV + + I ++ ++ + + ++IA
Sbjct: 119 KAFDEMLASGVAPNASSQNILIKMHARRSEFDLAWELIHKSGVEPDVGTYSTLIA----- 173
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
G C+ ++ EA+ VLD + + C+P Y + + + G + E ++++ + +LG P
Sbjct: 174 GLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLP 233
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFF 353
Y I L + + E +++ + + N + G + A+
Sbjct: 234 NVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELL 293
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
+ M+ +G PT T S L LC ++ + + + + + ++ + +YN ++S LC
Sbjct: 294 DVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEM 353
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G+ R ++ +M +KG++P+ +N L+ + C AK L + + G + N+ TY
Sbjct: 354 GKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSL---IHSLGFAANVVTY 410
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
NIL+ F G++ A RL M EK +APD TYT +++GLC+E AA F KS+
Sbjct: 411 NILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFDAATACFLKSLT 470
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F+ M+ G P S+ + L K +R++ D ++++ + D+ +Y+ +++
Sbjct: 117 ALKAFDEMLASGVAPNASSQNILIKMHARRSEFDL---AWELIHKSGVEPDVGTYSTLIA 173
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC +G++ EA+GV+ M K P V Y +++A CR+ + AK L +M GC
Sbjct: 174 GLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLP 233
Query: 469 NLKTYNILI------SKFSEV-----------------------------GEIEGALRLF 493
N+ TYN+LI KF EV G+ + AL L
Sbjct: 234 NVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELL 293
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
ML +G+ P A T++ LL LC + L A + +S +T M SLC
Sbjct: 294 DVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLC 351
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 81/196 (41%), Gaps = 3/196 (1%)
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+ G P + + L L + + E ++ + + A+ + S N+++
Sbjct: 91 DGGAPPNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFD 150
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
A+ +I + G++PDV Y++L+ CR + A + D M C ++TY ++
Sbjct: 151 LAWELIH---KSGVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIV 207
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ G I A L M G P+ TY L+ LC + +V +S D
Sbjct: 208 QAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWK 267
Query: 538 LARSILSTFMISLCRR 553
+ + +M LC++
Sbjct: 268 PSTVTYNIYMNGLCKK 283
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 213/469 (45%), Gaps = 16/469 (3%)
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
F ASQ ++ +++S++++ + S + V ++K + + + +
Sbjct: 51 FKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYG 110
Query: 131 QGKNTQKAFSVFNEV--KFNCEDIGPEICNSLLAVLASDGYIDNALKMFD--EMSHRGVE 186
+ +KA +F + +F C NS+L V+ +G AL+ ++ +
Sbjct: 111 KAHLPEKAIELFGRMVDEFQCRRTVRSF-NSVLNVIIQEGLFHRALEFYECGVGGKTNIS 169
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGFCKGKRVEEA 245
+ + F + I C KLG V ++ R+ V ++ G CK R++EA
Sbjct: 170 PNVLSFNLVIKAMC---KLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEA 226
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
+LDE++I C P + + ++ G + ++ G P Y I G
Sbjct: 227 VLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIING 286
Query: 306 LIVERRICEAKELGEVIVSGKFTIDD----DVLNALIGSVSSIDPRSAIVFFNFMIEKGR 361
L ++ ++ +A L + +V+ K +D ++N L+ S+D + + + E+G
Sbjct: 287 LCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVD---GVHLLSSLEERGH 343
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
S L L K KS+E + ++K + ++ Y+ ++ LC G+L EA
Sbjct: 344 HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKE 403
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
++ EM KG P+ Y+SL++ + + A ++W +M + C N Y++LI
Sbjct: 404 ILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC 463
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
E G++ A+ ++ +ML +G+ PD Y+S++ GLC +++ ++FN+
Sbjct: 464 EDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNE 512
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 182/405 (44%), Gaps = 11/405 (2%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFN-CEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
+ +I ++ + +A VF E+ CE C +L+ L + ID A+ + DEM
Sbjct: 175 FNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYC-TLMDGLCKEDRIDEAVLLLDEM 233
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
G S++ F V I C+ + +V ++D + + + V II+G C
Sbjct: 234 QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLK--GCVPNEVTYNTIINGLCLKG 291
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
++++A +LD + +C P+ + Y + G + +L + G Y
Sbjct: 292 KLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYS 351
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRSAIVFFNFMI 357
I GL E + EA L + +V + V +ALI + +D I+ M+
Sbjct: 352 TLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCE--MV 409
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
KG P T S+L K K S + + V+K ++ N+ + Y+V++ LC G+LR
Sbjct: 410 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLR 469
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA--SGCSGNLKTYNI 475
EA + M +GL PDV Y+S++ C + KL+++M S ++ TYNI
Sbjct: 470 EAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNI 529
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
L+ + I A+ L ++ML++G PD T L L ++ N
Sbjct: 530 LLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLN 574
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 170/396 (42%), Gaps = 9/396 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N ++ + G +D A+++F EM+ + E + + C+ ++ + + +LDE++
Sbjct: 176 NLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQI 235
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
SV ++I+G CK + K++D + ++ C P+ + Y + L G +
Sbjct: 236 E--GCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKL 293
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ +L + P Y I GL+ + R + L + ++ + L
Sbjct: 294 DKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTL 353
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G A+ + M+EKG P + S L LC+ K DE E+ +
Sbjct: 354 ISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGC 413
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ +Y+ ++ +G ++A V +EM + P+ Y+ L+ C + LR A
Sbjct: 414 TPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMM 473
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML--EKGVAPDATTYTSLLEG 514
+W M G ++ Y+ +I G +E L+LF+ ML E PD TY LL
Sbjct: 474 MWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRA 533
Query: 515 LCQETNLQAAFEVFN----KSVNHDVMLARSILSTF 546
LC++ ++ A ++ N + N D++ L+
Sbjct: 534 LCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 569
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 111/258 (43%), Gaps = 40/258 (15%)
Query: 315 AKELGEVIVSGKFTIDDDVL--NALIGSVSSID--PRSAIVFFNFMIEKGRVPTLSTLSN 370
A E E V GK I +VL N +I ++ + R+ VF I+K P + T
Sbjct: 154 ALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCE-PDVFTYCT 212
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LCK ++ DE V + + F ++NV+++ LC G + ++ M KG
Sbjct: 213 LMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKG 272
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG------ 484
P+ YN+++ C + L A L D+M AS C N TY LI+ + G
Sbjct: 273 CVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGV 332
Query: 485 -----------------------------EIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ E A+ L+ M+EKG P+ Y++L++GL
Sbjct: 333 HLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGL 392
Query: 516 CQETNLQAAFEVFNKSVN 533
C+E L A E+ + VN
Sbjct: 393 CREGKLDEAKEILCEMVN 410
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 216/471 (45%), Gaps = 11/471 (2%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
S++ F Q ++ +++ ++++ + SR+ + I VL ++K L +++
Sbjct: 46 SISPQIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFIL 105
Query: 125 IIPSLIQGKNTQKAFSVFNEV--KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM-- 180
I + + +A + F+ + +C+ NS+L V+ +G A K + +
Sbjct: 106 IFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSF-NSVLNVIIQEGDFSYAFKFYLHVFG 164
Query: 181 -SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCK 238
+ +G + + + + + I C KLGQ+ +D R+ N V +++G CK
Sbjct: 165 ANSKGFQPNLLTYNLIIKALC---KLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCK 221
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+RV+EA +LDE++ C P+ + + ++ + G + ++ G P
Sbjct: 222 ERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVT 281
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMI 357
Y I GL ++ ++ +A L E +VS K + +I G V + M
Sbjct: 282 YNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSME 341
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
E+G+ S+L L K KS+ V ++K ++ ++ Y + LC +
Sbjct: 342 ERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPD 401
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
EA ++QEM KG P+ Y+SLM+ ++ + A +W +M + N+ ++L+
Sbjct: 402 EAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLL 461
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ E G + AL ++ +ML +G+ PD Y+S+++GLC ++ ++F
Sbjct: 462 NGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLF 512
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 198/448 (44%), Gaps = 46/448 (10%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN L+Y+ I+K+L QI+ +++ + D Y ++ L + +
Sbjct: 171 QPNL----LTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 226
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+A + +E++ P N L+ L+ +G + A K+ D M +G + + + I
Sbjct: 227 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 286
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C KL + LS+L+++ + + V II+G K +R E+ +L + R
Sbjct: 287 HGLCLKGKLDKALSLLEKMV--SSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERG 344
Query: 257 CKP-DFIAYRIVAEEFKLMGSVFEREVVL-KKKRKLGVAPRTNDYREFILGLIVERRICE 314
K ++I +++ FK S E V L K+ + G P Y FI GL + + E
Sbjct: 345 QKANEYIYSSLISGLFKEGKS--ENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDE 402
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
A +D+L M+ KG +P T S+L K
Sbjct: 403 A---------------EDILQE-------------------MLSKGFLPNAFTYSSLMKG 428
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
K+ S + + V+K + + D ++ +V+++ LC SGRLREA V M +GL PD
Sbjct: 429 FFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPD 488
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFAS--GCSGNLKTYNILISKFSEVGEIEGALRL 492
V Y+S+++ C + KL+ +M ++ TYNIL + + A+ L
Sbjct: 489 VVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDL 548
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETN 520
++ML++G PD+ T LE L + N
Sbjct: 549 LNSMLDEGCDPDSLTCNIFLETLRERIN 576
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 2/166 (1%)
Query: 390 VLSAND--YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
V AN + ++ +YN+++ LC G++ A +EM K +PDV Y++LM C+
Sbjct: 162 VFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCK 221
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
E + A L D+M A GC N T+N+LI S+ G++ A +L NM KG P+ T
Sbjct: 222 ERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVT 281
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
Y +L+ GLC + L A + K V+ + + T + L ++
Sbjct: 282 YNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQ 327
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 131/322 (40%), Gaps = 36/322 (11%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
LII CK +++ A E+ ++ C PD Y +
Sbjct: 179 LIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMN--------------------- 217
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSA 349
GL ERR+ EA L + + + + N LI ++S + D A
Sbjct: 218 --------------GLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRA 263
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ M KG VP T + L LC + K D+ + + + + ++ + +Y +++
Sbjct: 264 AKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIING 323
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
L R + ++ M+ +G + Y+SL+ +E A +LW +M GC N
Sbjct: 324 LVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPN 383
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ Y I + + A + ML KG P+A TY+SL++G ++ + Q A V+
Sbjct: 384 VVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWK 443
Query: 530 KSVNHDVMLARSILSTFMISLC 551
+ ++ D+ S + LC
Sbjct: 444 EMMSQDMRHNVVCCSVLLNGLC 465
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F M K P + T S L LCK + DE V + + A + ++NV++
Sbjct: 193 AVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLID 252
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L +G L A ++ M KG P+ YN+L+ C + L A L ++M +S C
Sbjct: 253 ALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVP 312
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N TY +I+ + E + + +M E+G + Y+SL+ GL +E + A ++
Sbjct: 313 NQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLW 372
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
+ + F+ LCR
Sbjct: 373 KEMAEKGCKPNVVVYGAFIDGLCR 396
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/491 (23%), Positives = 220/491 (44%), Gaps = 17/491 (3%)
Query: 49 PSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLK 108
P L RV++ + +AL FF W QP+F S + +IL L + ++A V++
Sbjct: 85 PHLFIRVLHS-MRIRPRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVME 143
Query: 109 QVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLAS 166
+V S ++ LI G VF+++ N + P++ CN +L VL
Sbjct: 144 RVV-------SFEMHGVVDVLIAGH--VXCLLVFDKMIRN--GLLPDVKNCNRILRVLRD 192
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
+ + A ++ M G++ + + + + +C+ ++ Q L +L E+++R
Sbjct: 193 ENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQER--GCYPND 250
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
V ++++G K +E+A +++E+ Y + F G E ++++
Sbjct: 251 VTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEE 310
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSID 345
P + Y + GL ++ + ++ KFT D N+L+ G +
Sbjct: 311 MVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGC 370
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
A + F+ + + VPT+ T + L LC D + + K ++ F D+ +Y +
Sbjct: 371 ISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTI 430
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+V+ G + A G EM KGL PD YN+ + + A + ++M A+G
Sbjct: 431 LVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAG 490
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
++ TYN+ + + G E A L NM+ G+ PD TYTS++ G + +L+ A
Sbjct: 491 FPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAR 550
Query: 526 EVFNKSVNHDV 536
EVFN+ ++ V
Sbjct: 551 EVFNEMLSKGV 561
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/486 (19%), Positives = 202/486 (41%), Gaps = 19/486 (3%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
+Q + ++Y+++L S +++ +L +++ + Y ++ L +
Sbjct: 207 EQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGEL 266
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
++A + E+ + ++ N L+ G A + +EM +R + +
Sbjct: 267 EQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTL 326
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI-----IHGFCKGKRVEEAFKVLD 250
++ C K QV VR R + M+ ++ ++G+C+ + EAF + D
Sbjct: 327 MYGLC---KWVQVTG----VRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFD 379
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL---GVAPRTNDYREFILGLI 307
EL+ R+ P I Y + + G + + L+ K+++ G+ P Y + G
Sbjct: 380 ELKCRDLVPTVITYNTLIHGLCMWGYL---DAALRLKKEMTDQGLFPDIFTYTILVNGCF 436
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNA-LIGSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
+ A+ ++S D N ++G + D A M+ G P +
Sbjct: 437 KLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVI 496
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T + LC++ +E ++ + + ++ D +Y +++ +G LR+A V EM
Sbjct: 497 TYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEM 556
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
KG+ P V Y L+ A + +L A + +M N+ TYN +I+ +
Sbjct: 557 LSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRM 616
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
+ A + F M EKG+ P+ +YT L+ C + A ++ + ++ + S F
Sbjct: 617 DEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVF 676
Query: 547 MISLCR 552
+ +L R
Sbjct: 677 LKNLHR 682
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
+ M + G PT+ T + + + CK + D+ +E+ + + + +YNV+V+ L
Sbjct: 203 YGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSK 262
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G L +A G+I+EM GL+ YN L+ C++ L A L ++M L T
Sbjct: 263 KGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLST 322
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YN L+ + ++ G F +ML+ PD ++ SLL G C+ + AF +F++
Sbjct: 323 YNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELK 382
Query: 533 NHDVMLARSILSTFMISLC 551
D++ +T + LC
Sbjct: 383 CRDLVPTVITYNTLIHGLC 401
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%)
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
V+ + N D+++ N ++ L L +A V M++ G+ P V YN+++++ C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+E + A +L +M GC N TYN+L++ S+ GE+E A L ML G+ A
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
TY L+ G CQ+ AF++ + VN S +T M LC+ V +
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQV 336
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 184/398 (46%), Gaps = 7/398 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ +A D + + + M + + + + + I FC ++L L++L ++ K
Sbjct: 68 NKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK 127
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E ++ S + ++G+C GKR+ EA ++D++ + E +P+ + + + L
Sbjct: 128 LGYEPDIVTLSSL----LNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHN 183
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E ++ + G P Y + GL I A L + + GK D +
Sbjct: 184 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 243
Query: 336 ALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I ++ + + A+ F M KG P + T ++L + LC + + + +
Sbjct: 244 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 303
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ +++ ++ G+L EA + EM ++ +DPD+ Y+SL+ C D L A
Sbjct: 304 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 363
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K +++ M + C N+ TYN LI F + +E + LF M ++G+ + TY +L++G
Sbjct: 364 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 423
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L Q + A ++F K V+ V S + LC+
Sbjct: 424 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 461
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 207/476 (43%), Gaps = 61/476 (12%)
Query: 58 PYLLTHHSLALGFF--NWASQ-------------QPNFTHSPLSYHSILKSLSLSRQINA 102
P +T ++L G F N AS+ QP+ +Y +++ L I+
Sbjct: 167 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL----FTYGTVVNGLCKRGDIDL 222
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSL 160
S+LK+++ KI D +Y II +L KN A ++F E+ + + I P + NSL
Sbjct: 223 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM--DNKGIRPNVVTYNSL 280
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
+ L + G +A ++ +M R + + + F I F + KL + + DE+ KR
Sbjct: 281 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS- 339
Query: 221 SMINGSVIAVL-IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
I+ + +I+GFC R++EA + + + ++C P+ + Y + + F V E
Sbjct: 340 --IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 397
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+ ++ + G+ T Y I GL + G+ ++ K
Sbjct: 398 GMELFREMSQRGLVGNTVTYNTLIQGLF---------QAGDCDMAQKI------------ 436
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
F M+ G P + T S L LCK K ++ + V++ L + D
Sbjct: 437 -------------FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 483
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ +YN+M+ +C +G++ + + + + KG+ P+V Y +++ CR+ L A L+
Sbjct: 484 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 543
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+M G N TYN LI G+ + L M G DA+T + ++ L
Sbjct: 544 EMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 599
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 169/375 (45%), Gaps = 9/375 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L A+ + D M RG + +G + C+ + LS+L +K
Sbjct: 173 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL---KK 229
Query: 218 RENSMINGSV-IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E I V I II C K V +A + E+ + +P+ + Y + G
Sbjct: 230 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 289
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL-- 334
+ +L + + P + I + E ++ EA++L + ++ K +ID D+
Sbjct: 290 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTY 347
Query: 335 NALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
++LI D A F MI K P + T + L K CK + +E +E+++ +S
Sbjct: 348 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 407
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ +YN ++ L +G A + ++M G+ PD+ Y+ L++ C+ L
Sbjct: 408 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 467
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A +++ + S ++ TYNI+I + G++E LF ++ KGV P+ YT+++
Sbjct: 468 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 527
Query: 514 GLCQETNLQAAFEVF 528
G C++ + A +F
Sbjct: 528 GFCRKGLKEEADALF 542
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 165/366 (45%), Gaps = 5/366 (1%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L G ID AL + +M +E + + I C + L++ E+ +N I
Sbjct: 214 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM---DNKGI 270
Query: 224 NGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+V+ +I C R +A ++L ++ R+ P+ + + + + F G + E E
Sbjct: 271 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 330
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSV 341
+ + K + P Y I G + R+ EAK + E+++S + N LI G
Sbjct: 331 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 390
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ + F M ++G V T + L + L + D +++K + ++ D+
Sbjct: 391 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 450
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y++++ LC G+L +A V + +++ ++PD+ YN ++E C+ + L+ +
Sbjct: 451 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 510
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G N+ Y +IS F G E A LF M E G P++ TY +L+ ++ +
Sbjct: 511 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDK 570
Query: 522 QAAFEV 527
A+ E+
Sbjct: 571 AASAEL 576
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F M++ +P++ + L + K NK D ++ + + + D+ SYN++++
Sbjct: 48 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 107
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C +L A V+ +M + G +PD+ +SL+ C + A L DQMF
Sbjct: 108 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 167
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N T+N LI + A+ L M+ +G PD TY +++ GLC+ ++ A +
Sbjct: 168 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 227
Query: 529 NKSVNHDVMLARSILSTFMISLC 551
K + I +T + +LC
Sbjct: 228 KKMEKGKIEADVVIYTTIIDALC 250
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 218/464 (46%), Gaps = 27/464 (5%)
Query: 82 HSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
+SP ++Y++++K L + +I+ + +++ T D Y +I L N A
Sbjct: 135 YSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIAL 194
Query: 140 SVFNEV-------KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTI 190
+ E+ + NC+ P + N ++ L G D A ++F+EM +G+ S I
Sbjct: 195 KLHQEMLNDISRYEINCK---PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSII 251
Query: 191 GFGVFIWKFCENAKLGQVLSMLDEVRKR--ENSMINGSVIAVLIIHGFCKGKRVEEAFKV 248
+ I FC K + +LDE+ + + M+ +V+ I CK +V EA K+
Sbjct: 252 SYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVL----IDTLCKEGKVIEAKKL 307
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFE-REVVLKKKRKLGVAPRTNDYREFILGLI 307
L + PD + Y + E F ++G + RE+ + K G P Y I G
Sbjct: 308 LGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSK-GCEPDVISYNVLINGYS 366
Query: 308 VERRICEAKEL-GEVIVSGK--FTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT 364
++ EA +L E+++ GK I D L I +D A F+ M G
Sbjct: 367 KTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVD--DAKKLFSVMKAHGIAEN 424
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
T LCK + E ++++ L ++++ ++E+ N ++ LC +G+L A+ + +
Sbjct: 425 SYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFE 484
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
++ +G +P+V Y ++ CRE + A L +M A+GC+ ++ TYN L+ F E
Sbjct: 485 KLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESN 544
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++E ++L H M +K V+PDA T + +++ L ++ Q +
Sbjct: 545 KLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 588
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/512 (22%), Positives = 218/512 (42%), Gaps = 45/512 (8%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL FF+ + T S S++ +L L+ + + + S+ Q++++ ++ D ++
Sbjct: 53 ALHFFHLM-MRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILL 111
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRG 184
L ++ F+ F + P I N+L+ L + I A ++F M G
Sbjct: 112 NCLCNVNRLREGFAAFAGILR--RGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG 169
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVL----SMLDEVRKRE----------NSMING----- 225
+ +G I C + L ML+++ + E N +++G
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229
Query: 226 -------------------SVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
S+I+ +IHGFC + EE+ ++LDE+ + +PD + +
Sbjct: 230 REDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFN 289
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
++ + G V E + +L + G+ P Y I G + + A+EL + S
Sbjct: 290 VLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSK 349
Query: 326 KFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
D N LI S ++ A+ +N M+ G+ P + T +L K + K D+
Sbjct: 350 GCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDA 409
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+++ V+ A+ + +Y + + LC + L EA + E+K ++ N L++
Sbjct: 410 KKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDG 469
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C+ L A +L++++ G N+ TY I+I F G+++ A L M G PD
Sbjct: 470 LCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPD 529
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
TY +L+ G + L+ ++ ++ DV
Sbjct: 530 IITYNTLMRGFYESNKLEEVVQLLHRMAQKDV 561
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 174/388 (44%), Gaps = 9/388 (2%)
Query: 172 NALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL 231
+AL F M S F + + QV S+ +++R + + + +
Sbjct: 52 HALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRL--SGLSSDRCTLNI 109
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+++ C R+ E F + R P+ + Y + + + + E + + +KLG
Sbjct: 110 LLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG 169
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVS--GKFTIDDD----VLNALIGSVSSID 345
P Y I GL I A +L + +++ ++ I+ N ++ + +
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229
Query: 346 PRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
A F M +G +P++ + ++L C K +E + + DM ++N
Sbjct: 230 REDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFN 289
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
V++ LC G++ EA ++ M G+ PD+ YNSL+E C L A++L+ M +
Sbjct: 290 VLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSK 349
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
GC ++ +YN+LI+ +S+ ++E A++L++ ML G P+ TY SLL+G+ + A
Sbjct: 350 GCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDA 409
Query: 525 FEVFNKSVNHDVMLARSILSTFMISLCR 552
++F+ H + F+ LC+
Sbjct: 410 KKLFSVMKAHGIAENSYTYGIFLDGLCK 437
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/439 (22%), Positives = 181/439 (41%), Gaps = 42/439 (9%)
Query: 120 SVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDE 179
S + ++ L + K+ + FS++N+++ + N LL L + + F
Sbjct: 70 SSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAG 129
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
+ RG + + + I C ++ + + +R ++ V +I G C
Sbjct: 130 ILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF--LRMQKLGCTPDVVTYGTLIKGLCGT 187
Query: 240 KRVEEAFKVLDEL-----RIR-ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
+ A K+ E+ R CKP+ I Y I+ + +G E + + ++ + G+
Sbjct: 188 GNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMI 247
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFF 353
P Y I G + E+K L +D+
Sbjct: 248 PSIISYNSLIHGFCCAGKWEESKRL----------LDE---------------------- 275
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
M+++G P + T + L LCK K E ++ V+ + D+ +YN ++ C
Sbjct: 276 --MLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMV 333
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G L A + M KG +PDV YN L+ + + A KL+++M G N+ TY
Sbjct: 334 GDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITY 393
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
+ L+ G+++ A +LF M G+A ++ TY L+GLC+ L A ++F + +
Sbjct: 394 DSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKS 453
Query: 534 HDVMLARSILSTFMISLCR 552
+ L L+ + LC+
Sbjct: 454 SNFKLEIENLNCLIDGLCK 472
>gi|222622724|gb|EEE56856.1| hypothetical protein OsJ_06476 [Oryza sativa Japonica Group]
Length = 538
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 191/420 (45%), Gaps = 16/420 (3%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG-----PEI-C-NSLLAVLASDGYIDNAL 174
Y + +L + + +VF E+K D G P + C N+L+ LA G AL
Sbjct: 55 YNVAMKALALAGDLDEVVAVFAELKRTAADGGDGGAPPNVLCYNTLVNALAEAGREGEAL 114
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIH 234
K FDEM GV + + I ++ ++ + + ++IA
Sbjct: 115 KAFDEMLASGVAPNASSQNILIKMHARRSEFDLAWELIHKSGVEPDVGTYSTLIA----- 169
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
G C+ ++ EA+ VLD + + C+P Y + + + G + E ++++ + +LG P
Sbjct: 170 GLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLP 229
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFF 353
Y I L + + E +++ + + N + G + A+
Sbjct: 230 NVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELL 289
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
+ M+ +G PT T S L LC ++ + + + + + ++ + +YN ++S LC
Sbjct: 290 DVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLCEM 349
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G+ R ++ +M +KG++P+ +N L+ + C AK L + + G + N+ TY
Sbjct: 350 GKWRGIMKLLTDMIKKGIEPNTRTFNILIRSLCVGGKSSLAKSL---IHSLGFAANVVTY 406
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
NIL+ F G++ A RL M EK +APD TYT +++GLC+E AA F KS+
Sbjct: 407 NILLHWFYYHGKLTEANRLISVMEEKNIAPDEVTYTIIIDGLCRERKFDAATACFLKSLT 466
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F+ M+ G P S+ + L K +R++ D ++++ + D+ +Y+ +++
Sbjct: 113 ALKAFDEMLASGVAPNASSQNILIKMHARRSEFDL---AWELIHKSGVEPDVGTYSTLIA 169
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC +G++ EA+GV+ M K P V Y +++A CR+ + AK L +M GC
Sbjct: 170 GLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIVQAYCRDGRIVEAKLLMAEMERLGCLP 229
Query: 469 NLKTYNILI------SKFSEV-----------------------------GEIEGALRLF 493
N+ TYN+LI KF EV G+ + AL L
Sbjct: 230 NVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWKPSTVTYNIYMNGLCKKGKAKEALELL 289
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
ML +G+ P A T++ LL LC + L A + +S +T M SLC
Sbjct: 290 DVMLGEGLEPTAYTWSILLNCLCHSSRLLDAIYLLERSTELKWYAGVVAYNTVMSSLC 347
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 81/196 (41%), Gaps = 3/196 (1%)
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+ G P + + L L + + E ++ + + A+ + S N+++
Sbjct: 87 DGGAPPNVLCYNTLVNALAEAGREGEALKAFDEMLASGVAPNASSQNILIKMHARRSEFD 146
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
A+ +I + G++PDV Y++L+ CR + A + D M C ++TY ++
Sbjct: 147 LAWELIH---KSGVEPDVGTYSTLIAGLCRAGKIVEAWGVLDWMLEKNCRPMVQTYTPIV 203
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ G I A L M G P+ TY L+ LC + +V +S D
Sbjct: 204 QAYCRDGRIVEAKLLMAEMERLGCLPNVVTYNVLIRALCDDDKFDEVEQVLMESSTKDWK 263
Query: 538 LARSILSTFMISLCRR 553
+ + +M LC++
Sbjct: 264 PSTVTYNIYMNGLCKK 279
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 179/390 (45%), Gaps = 9/390 (2%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN L +L AL +F R + +G+ I F L + +L+E++
Sbjct: 25 CNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMK 84
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+ +V+ ++ G C RV EA + + ++C PD + Y + G
Sbjct: 85 S--SGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCKAGK 141
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-KELGEVIVSGKFTID---DD 332
E + +L++ G AP T + I GL +A + L +VI G D +
Sbjct: 142 FDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFET 201
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
++ L +S++ S ++ +I KG PT+ + + CK D ++ +V+
Sbjct: 202 IIQRLCNKYNSVELASKVL--GVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMI 259
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
++ ++ ++++ LC + R+ EA ++++M G P+V Y++++ C++ +
Sbjct: 260 EKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVD 319
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A +L+ M C N+ T+NILI + IE A +L+H M E G APD TY SL+
Sbjct: 320 DAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLI 379
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
+GLC+ + AF++F V A ++
Sbjct: 380 DGLCKSFQVDEAFQLFQTIPESGVSAANAV 409
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/487 (21%), Positives = 205/487 (42%), Gaps = 41/487 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y +++ S + ++ +L+++K + ++ V+ ++ L +A F
Sbjct: 58 FTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRA 117
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ +C P++ +L+ L G D A M EM +G T+ F I C+
Sbjct: 118 MAKDC---APDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKF 174
Query: 203 AKLGQVLSMLDEVRKRE------------------------NSMINGSVIAV-------- 230
Q +L++V +R S + G VIA
Sbjct: 175 GSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLM 234
Query: 231 --LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
L+I+GFCK K ++ A+K+L+ + + C P+ + I+ V E + +L+K
Sbjct: 235 FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV 294
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPR 347
G +P Y I GL + ++ +A EL +++ + N LI G +
Sbjct: 295 MGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIE 354
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY-FTDMESYNVM 406
A ++ M E G P + T ++L LCK + DE ++++ + + + +Y+ +
Sbjct: 355 EARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTL 414
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
GR+ +A + + KG PD++ Y SL+ C+ +L ++M + G
Sbjct: 415 FHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGF 474
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ T + ++ E E A++LF +M +G DA Y ++EG+ + + A
Sbjct: 475 PPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALA 534
Query: 527 VFNKSVN 533
V + ++
Sbjct: 535 VLEQVID 541
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/527 (18%), Positives = 219/527 (41%), Gaps = 88/527 (16%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++ +L + + + +L+++ D+ + +I L + + ++AF V +
Sbjct: 127 MTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLED 186
Query: 145 V--------KFNCEDIGPEICNS---------LLAVLASDGY------------------ 169
V E I +CN +L V+ + G+
Sbjct: 187 VIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAK 246
Query: 170 -IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS-- 226
+D+A K+ + M +G + F + I C+ ++G+ +L++ M+ G
Sbjct: 247 DLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK-------MVMGGCS 299
Query: 227 ---VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
V +I+G CK +V++A+++ + R C P+ + + I+ + + E +
Sbjct: 300 PNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQL 359
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI--GSV 341
+ R+ G AP Y I GL ++ EA +L + I + + V + + G
Sbjct: 360 YHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYA 419
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR----------------------- 378
+ A F+ +++KG P L+T ++L CK
Sbjct: 420 ALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVN 479
Query: 379 ------------NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
N ++ ++++ ++A D YN++V + + + +A V++++
Sbjct: 480 TLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQV 539
Query: 427 ---KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+ + +P S ++L+E+ C+ AK+L +M G + + +YN L+S S +
Sbjct: 540 IDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRL 599
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ A ++F M+ G AP+ +T ++ LC + A+E+ +
Sbjct: 600 QRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQR 646
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/436 (21%), Positives = 184/436 (42%), Gaps = 12/436 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++ ++ L + ++ +L+++ + + + Y +I L + A+ +F
Sbjct: 268 FTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQL 327
Query: 145 V-KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ + NC P + N L+ L I+ A +++ M G I + I C+
Sbjct: 328 MERRNCP---PNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCK 384
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ ++ + + + + S N + L HG+ R+ +A ++ L + PD
Sbjct: 385 SFQVDEAFQLFQTIPESGVSAANAVTYSTLF-HGYAALGRMADACRIFSMLVDKGFSPDL 443
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
Y + E+ E ++++ G PR N + GL A +L +
Sbjct: 444 ATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDS 503
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRV---PTLSTLSNLSKNLCK 377
+ + T D + N ++ G + A+ +I+K P+ S + L ++LC+
Sbjct: 504 MAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQ 563
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
K+D+ ++ +S + + SYN ++S L R EA V + M G P++S
Sbjct: 564 VGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEIST 623
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
N ++ C + A +L +M GC +++T N LI + + G + A +L M
Sbjct: 624 VNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMT 683
Query: 498 EKGVAPDATTYTSLLE 513
E G+ P+ TT+ LLE
Sbjct: 684 EAGLEPNDTTH-DLLE 698
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 89/179 (49%), Gaps = 1/179 (0%)
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LC+ N+ E + +++ A + +Y +++ ++G L A +++EMK G + +
Sbjct: 32 LCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGN 91
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+ +LM+ C + A + + M A C+ ++ TY L+ + G+ + A +
Sbjct: 92 AVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLR 150
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
M+ +G APD T+++L++GLC+ + + AF V + + + + T + LC +
Sbjct: 151 EMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNK 209
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 96/215 (44%), Gaps = 2/215 (0%)
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G S+ D AI M G + L K LC + E +E ++ + A D
Sbjct: 66 GFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAP 124
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D+ +Y +V LC +G+ EA G+++EM +G PD +++L++ C+ A ++
Sbjct: 125 DVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVL 184
Query: 459 DQMFASGCSGNLKTYNILISKF-SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ + G + + +I + ++ +E A ++ ++ KG P + ++ G C+
Sbjct: 185 EDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCK 244
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+L +A+++ + + + + LC+
Sbjct: 245 AKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCK 279
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 62/151 (41%), Gaps = 1/151 (0%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
S N + LC R +EA + + + P+ Y L+ L A +L ++M
Sbjct: 24 SCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEM 83
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+SG GN + L+ + G + AL F M K APD TYT+L+ LC+
Sbjct: 84 KSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCKAGKF 142
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A + + V ST + LC+
Sbjct: 143 DEAQGMLREMVAQGCAPDTVTFSTLIDGLCK 173
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 184/398 (46%), Gaps = 7/398 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ +A D + + + M + + + + + I FC ++L L++L ++ K
Sbjct: 84 NKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK 143
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E ++ S + ++G+C GKR+ EA ++D++ + E +P+ + + + L
Sbjct: 144 LGYEPDIVTLSSL----LNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHN 199
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E ++ + G P Y + GL I A L + + GK D +
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 336 ALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I ++ + + A+ F M KG P + T ++L + LC + + + +
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ +++ ++ G+L EA + EM ++ +DPD+ Y+SL+ C D L A
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K +++ M + C N+ TYN LI F + +E + LF M ++G+ + TY +L++G
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L Q + A ++F K V+ V S + LC+
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 207/476 (43%), Gaps = 61/476 (12%)
Query: 58 PYLLTHHSLALGFF--NWASQ-------------QPNFTHSPLSYHSILKSLSLSRQINA 102
P +T ++L G F N AS+ QP+ +Y +++ L I+
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL----FTYGTVVNGLCKRGDIDL 238
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSL 160
S+LK+++ KI D +Y II +L KN A ++F E+ + + I P + NSL
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM--DNKGIRPNVVTYNSL 296
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
+ L + G +A ++ +M R + + + F I F + KL + + DE+ KR
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS- 355
Query: 221 SMINGSVIAVL-IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
I+ + +I+GFC R++EA + + + ++C P+ + Y + + F V E
Sbjct: 356 --IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+ ++ + G+ T Y I GL + G+ ++ K
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLF---------QAGDCDMAQKI------------ 452
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
F M+ G P + T S L LCK K ++ + V++ L + D
Sbjct: 453 -------------FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ +YN+M+ +C +G++ + + + + KG+ P+V Y +++ CR+ L A L+
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 559
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+M G N TYN LI G+ + L M G DA+T + ++ L
Sbjct: 560 EMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 169/375 (45%), Gaps = 9/375 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L A+ + D M RG + +G + C+ + LS+L +K
Sbjct: 189 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL---KK 245
Query: 218 RENSMINGSV-IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E I V I II C K V +A + E+ + +P+ + Y + G
Sbjct: 246 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL-- 334
+ +L + + P + I + E ++ EA++L + ++ K +ID D+
Sbjct: 306 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTY 363
Query: 335 NALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
++LI D A F MI K P + T + L K CK + +E +E+++ +S
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ +YN ++ L +G A + ++M G+ PD+ Y+ L++ C+ L
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A +++ + S ++ TYNI+I + G++E LF ++ KGV P+ YT+++
Sbjct: 484 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 543
Query: 514 GLCQETNLQAAFEVF 528
G C++ + A +F
Sbjct: 544 GFCRKGLKEEADALF 558
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 166/369 (44%), Gaps = 5/369 (1%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L G ID AL + +M +E + + I C + L++ E+ +N I
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM---DNKGI 286
Query: 224 NGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+V+ +I C R +A ++L ++ R+ P+ + + + + F G + E E
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSV 341
+ + K + P Y I G + R+ EAK + E+++S + N LI G
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ + F M ++G V T + L + L + D +++K + ++ D+
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y++++ LC G+L +A V + +++ ++PD+ YN ++E C+ + L+ +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G N+ Y +IS F G E A LF M E G P++ TY +L+ ++ +
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDK 586
Query: 522 QAAFEVFNK 530
A+ E+ +
Sbjct: 587 AASAELIKE 595
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F M++ +P++ + L + K NK D ++ + + + D+ SYN++++
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C +L A V+ +M + G +PD+ +SL+ C + A L DQMF
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N T+N LI + A+ L M+ +G PD TY +++ GLC+ ++ A +
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 529 NKSVNHDVMLARSILSTFMISLC 551
K + I +T + +LC
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALC 266
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 202/473 (42%), Gaps = 14/473 (2%)
Query: 64 HSLALGFFN----WASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDS 119
H+ A+ FN P F +++IL SL ++ S+ K + IT D
Sbjct: 50 HNDAVALFNRMLLMRPPPPTF-----QFNNILSSLVKMQRFPTAISLSKHLDFKGITSDL 104
Query: 120 SVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDE 179
+I +FSV + +L+ L G + ALK D+
Sbjct: 105 VTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDD 164
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCK 238
+ + I +G I C K+G+ + + +R E I V+ +II CK
Sbjct: 165 VVALEFQLDRISYGTLINGLC---KIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCK 221
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
K V EA + E+ ++ P+ + Y + F +MG + E +L + + + P
Sbjct: 222 NKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYT 281
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMI 357
+ I L E ++ AK + V++ D N+L+ ++ + A FN M
Sbjct: 282 FSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMA 341
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+ G P + + + + LCK DE + +++ + + + ++N ++ LC SGR+
Sbjct: 342 QSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIA 401
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+ ++ +M+ + DV Y+SL++A C+ L A L+ +M ++ TY ILI
Sbjct: 402 YVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILI 461
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ G ++ A +F ++L KG D TYT ++ G C+ A + +K
Sbjct: 462 DGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSK 514
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 149/322 (46%), Gaps = 1/322 (0%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I+ K +R A + L + D + I+ F +G + VL K G
Sbjct: 75 ILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRG 134
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAI 350
P I GL + + +A + + +V+ +F +D LI + I + ++AI
Sbjct: 135 YHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAI 194
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ E+ P + + + +LCK E +Y ++A + ++ +Y ++
Sbjct: 195 QLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGF 254
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C G L EA ++ EMK K ++PDV ++ L++A +E ++ AK + M + ++
Sbjct: 255 CIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDV 314
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TYN L+ + V E++ A +F++M + GV P +YT +++GLC+ + A +F +
Sbjct: 315 VTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEE 374
Query: 531 SVNHDVMLARSILSTFMISLCR 552
+ +V+ ++ + LC+
Sbjct: 375 MKHKNVIPNTITFNSLIDGLCK 396
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 100/211 (47%), Gaps = 4/211 (1%)
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
D A+ FN M+ P +N+ +L K + + + K L +D+ + N
Sbjct: 49 DHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLN 108
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
++++ C G++ ++ V+ + ++G PDV +L++ C ++ A K D + A
Sbjct: 109 ILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVAL 168
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
+ +Y LI+ ++GE + A++L N+ E+ + PD Y +++ LC+ + A
Sbjct: 169 EFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEA 228
Query: 525 FEVFN----KSVNHDVMLARSILSTFMISLC 551
+++ K + +V+ +++ F I C
Sbjct: 229 CNLYSEMNAKQIYPNVVTYTTLIYGFCIMGC 259
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P +N+++ + + A L + G + +L T NILI+ F +G+I + +
Sbjct: 67 PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+L++G PD T T+L++GLC ++ A + + V + L R T + LC+
Sbjct: 127 LATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCK 186
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 183/391 (46%), Gaps = 11/391 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++ L +G +D A + EM R V + + I + + + + +L V
Sbjct: 15 NTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVL-TVMV 73
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
N S I+HG+C + E+A + ++ +PD + Y + + G
Sbjct: 74 MPNCFTYNS-----IMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKC 128
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E + K G+ P Y + G + + E +L ++V +D V N L
Sbjct: 129 TEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNIL 188
Query: 338 IGSVSSIDPRSAIVF-FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I + + + +V F+ M ++G P + LCK + D+ + ++ +
Sbjct: 189 ICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGL 248
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ Y ++ LCT + +A +I E+ +G++P++ F+N+++++ C+E + +KK
Sbjct: 249 TPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKK 308
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L+D + G + ++ TY+ LI + G+++GA++L M+ G+ PD+ TY++L+ G C
Sbjct: 309 LFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYC 368
Query: 517 QETNLQAAFEVFNK----SVNHDVMLARSIL 543
+ ++ A +F + VN D++ IL
Sbjct: 369 KINRMEDALALFKEMESNGVNPDIITYNIIL 399
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 197/467 (42%), Gaps = 45/467 (9%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN- 143
+SY++I+ L ++ ++ +++ D+ Y II +L + + +A V
Sbjct: 12 VSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTV 71
Query: 144 EVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
V NC NS++ S G + A+ +F +M G+E + + + C+N
Sbjct: 72 MVMPNCFTY-----NSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNG 126
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
K + + D + KR + ++HG+ + E +L + + D
Sbjct: 127 KCTEARKIFDSMVKR--GLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+ I+ + V E +V K R+ G+ P +YR I GL +LG
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLC---------KLGR--- 232
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+DD +LN F MI+KG P + ++L LC +K ++
Sbjct: 233 -----LDDAMLN-----------------FEQMIDKGLTPNVVVYTSLIHALCTYDKWEK 270
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
E+ + ++ +N ++ LC GR+ E+ + + G++PDV Y++L++
Sbjct: 271 AEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLID 330
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C + A KL M + G + TY+ LI+ + ++ +E AL LF M GV P
Sbjct: 331 GYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNP 390
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
D TY +L GL + AA E++ + L LST+ I L
Sbjct: 391 DIITYNIILHGLFRTRRTAAAKELYARITESGTQLE---LSTYNIIL 434
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 133/301 (44%), Gaps = 11/301 (3%)
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C PD ++Y + + G V + + + V+P Y I L + + A
Sbjct: 7 CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
E+ V+V + +++ G SS AI F M G P + T ++L LC
Sbjct: 67 EVLTVMVMPNCFTYNSIMH---GYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLC 123
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K K E +++ + D+ +Y ++ + G L E + ++ M + G+ D
Sbjct: 124 KNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHH 183
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
+N L+ A +++ + ++ +M G + N Y +I ++G ++ A+ F M
Sbjct: 184 VFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQM 243
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAA----FEVFNKSVNHDVMLARSILSTFMISLCR 552
++KG+ P+ YTSL+ LC + A FE+ ++ +N +++ +IL SLC+
Sbjct: 244 IDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILD----SLCK 299
Query: 553 R 553
Sbjct: 300 E 300
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 89/199 (44%), Gaps = 5/199 (2%)
Query: 356 MIEKGRVP-TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M + GR P + + + + L K D+ Y + D +YN +++ L +
Sbjct: 1 MADDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQ 60
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ A V+ M + P+ YNS+M C A ++ +M + G ++ TYN
Sbjct: 61 AMDRAMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYN 116
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
L+ + G+ A ++F +M+++G+ PD TTY +LL G + L ++ V +
Sbjct: 117 SLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQN 176
Query: 535 DVMLARSILSTFMISLCRR 553
+ L + + + + ++
Sbjct: 177 GMQLDHHVFNILICAYTKQ 195
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 226/509 (44%), Gaps = 45/509 (8%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A GF NW ++ F SY +++ L+ + +++ + ++ ++ D + Y +I
Sbjct: 168 ARGFLNWMWKE-GFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILI 226
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRG 184
++ K+ + A +++++ + P + N +++ L+ G +D+ LK++D M
Sbjct: 227 DGFLKEKDHKMAMQLWDKL-LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNE 285
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
E + I C+ + + S+ +E+ +R+ + I+ V ++ GFC+ +++E
Sbjct: 286 REKDLYTYSSLIHGLCDEGNVDKAESVFNELVERK-AFID-VVTYNTMLGGFCRCGKIKE 343
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
+ ++ + R + ++Y I+ + G + E ++ + G A Y FI
Sbjct: 344 SLELWRIMEQRN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIH 402
Query: 305 GLIV-----------------------------------ERRICEAKELGEVIVSGKFTI 329
GL V +RR+ EA L + + +
Sbjct: 403 GLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVEL 462
Query: 330 DDDVLNALIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
+ V NALIG + D R A + M + G +PT+ + + L LC+ K E
Sbjct: 463 NSHVCNALIGGLIR-DSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAF 521
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
K + N D+++Y++++ LC ++ A + + + GL+PDV +N L+ C
Sbjct: 522 VKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCS 581
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
L A + M C+ NL TYN L+ + +V + A ++ M + G+ PD +
Sbjct: 582 VGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIIS 641
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
Y ++L+GLC + A E F+ + NH +
Sbjct: 642 YNTILKGLCLCHRVSYAIEFFDDARNHGI 670
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 129/579 (22%), Positives = 230/579 (39%), Gaps = 100/579 (17%)
Query: 46 SLSPSLVARVI----NPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQIN 101
SLSP V +++ NP A F+ A++ P + HS + YH IL+ LS +R +
Sbjct: 7 SLSPKHVLKLLKSEKNP------RAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVT 60
Query: 102 AIDSVLKQVKVNKITLDSSV------------------------------------YRFI 125
+ +++ ++ + D V Y +
Sbjct: 61 HVGRIVELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTL 120
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGP--EICNSLLAVLASDGYIDNALKMFDEMSHR 183
+ + ++ K K S+F F + P + N L+ + + A + M
Sbjct: 121 LNAFVEAKQWVKVESLF--AYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKE 178
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G + + I + KL L + DE+ +R + ++I GF K K +
Sbjct: 179 GFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERR--VAPDVTCYNILIDGFLKEKDHK 236
Query: 244 EAFKVLDEL-RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND---Y 299
A ++ D+L P+ + I+ G V + LK ++ R D Y
Sbjct: 237 MAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRV---DDCLKIWDRMKQNEREKDLYTY 293
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIE 358
I GL E + +A+ + +V K ID N ++G + ++ + M +
Sbjct: 294 SSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQ 353
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
+ V +S + L K L + K DE +++++ A Y D +Y + + LC +G + +
Sbjct: 354 RNSVNIVS-YNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNK 412
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF---------------- 462
A GV+QE++ KG DV Y S+++ C++ L A L +M
Sbjct: 413 ALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIG 472
Query: 463 -------------------ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+GC + +YNILI E G+ A MLE G+ P
Sbjct: 473 GLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKP 532
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNK----SVNHDVML 538
D TY+ LL GLC++ ++ A E++++ + DVM+
Sbjct: 533 DLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMM 571
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 191/453 (42%), Gaps = 4/453 (0%)
Query: 64 HSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
H +A+ ++ + + + +++ ++ LS +++ + ++K N+ D Y
Sbjct: 235 HKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYS 294
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR 183
+I L N KA SVFNE+ I N++L G I +L+++ M R
Sbjct: 295 SLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQR 354
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
+ + + + I EN K+ + +M+ + + + + + I HG C V
Sbjct: 355 N-SVNIVSYNILIKGLLENGKIDEA-TMIWRLMPAKGYAADNTTYGIFI-HGLCVNGYVN 411
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
+A V+ E+ + D AY + + + E ++K+ K GV ++ I
Sbjct: 412 KALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALI 471
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRV 362
GLI + R+ +A L + N LI G + A F M+E G
Sbjct: 472 GGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLK 531
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P L T S L LC+ K + +E++ + D+ +N+++ LC+ G+L +A V
Sbjct: 532 PDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTV 591
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ M+ + ++ YN+LME + A +W M+ G ++ +YN ++
Sbjct: 592 MANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCL 651
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ A+ F + G+ P T+ L+ +
Sbjct: 652 CHRVSYAIEFFDDARNHGIFPTVYTWNILVRAV 684
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 132/570 (23%), Positives = 234/570 (41%), Gaps = 50/570 (8%)
Query: 9 LATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHS--- 65
L T+ I S S + L+ + H SP + ++P LTH
Sbjct: 22 LRTKTLTHITSPSCVQSTVTRVCSLVYDSYHHHYNHARFSPPTLHLDVDPNSLTHDQAVT 81
Query: 66 ------------LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVN 113
+AL FFNWA F H Y + SL ++ V++
Sbjct: 82 IVASLASDAGSMVALSFFNWAIASSKFRHFTRLYIACAASLISNKNFEKAHEVMQ----- 136
Query: 114 KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNA 173
++ S + ++A + E+ + N ++ ++ G ++ A
Sbjct: 137 ----------CMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYA 186
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA---- 229
+FDEM RGV+ + + + V + +C KLG VL E + MI +
Sbjct: 187 ENLFDEMCARGVQPNCVSYRVMVVGYC---KLGNVL----ESDRWLGGMIERGFVVDNAT 239
Query: 230 -VLIIHGFCKGKRVEEA---FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
LI+ FC+ V A F+ E+ +R P+ I + + E GSV + +L+
Sbjct: 240 LSLIVREFCEKGFVTRALWYFRRFCEMGLR---PNLINFTCMIEGLCKRGSVKQAFEMLE 296
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELG-EVIVSGKFTIDDDVLNALI-GSVSS 343
+ G P + I GL + +A L +++ S + A+I G
Sbjct: 297 EMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRD 356
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
A + + M E+G P +T + L CK + E+ V++ + ++ +Y
Sbjct: 357 EKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTY 416
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N +V LC GR++EAY V++ R GLD D Y L+ C++ ++ A L+++M
Sbjct: 417 NAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVK 476
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
SG ++ +Y LI+ F ++ + F + G+ P TYTS++ G C+E NL+
Sbjct: 477 SGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRL 536
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCRR 553
A + F++ +H + LC++
Sbjct: 537 ALKFFHRMSDHGCASDSITYGALISGLCKQ 566
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 150/352 (42%), Gaps = 4/352 (1%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G++ AL F G+ + I F I C+ + Q ML+E+ R
Sbjct: 251 GFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGR--GWKPNVY 308
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDEL-RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
+I G CK E+AF++ +L R KP+ + Y + + + E++L +
Sbjct: 309 THTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSR 368
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSID 345
++ G+AP TN Y I G A EL V+ F+ + NA++ G
Sbjct: 369 MKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGR 428
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
+ A G T + L CK+ + + + ++ + + D+ SY
Sbjct: 429 VQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTT 488
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+++ C R++E+ +E R GL P Y S++ CRE LR A K + +M G
Sbjct: 489 LIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHG 548
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
C+ + TY LIS + +++ A L+ M+EKG+ P T +L C+
Sbjct: 549 CASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCK 600
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 118/510 (23%), Positives = 218/510 (42%), Gaps = 9/510 (1%)
Query: 30 WTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHS 89
W P E + L LR SL PS V V+ +AL FF WA +Q + H P+ Y+S
Sbjct: 160 WNPKHEGQMRNL-LR-SLKPSQVCAVLRSQ--DDERVALKFFYWADRQWRYRHDPMVYYS 215
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
+L+ LS ++ VL +K I + ++ S + + A V ++
Sbjct: 216 MLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAG 275
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ ICN+ + V ++ AL+ + M G+ + + + I +C+ ++ + +
Sbjct: 276 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 335
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RIRECKPDFIAYRIVA 268
+LD++ + + V I+ CK KR+ E ++ ++ + D + Y +
Sbjct: 336 ELLDDMPSK--GCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLI 393
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKF 327
E LK + G Y + L E R+ EAK+L E++ G
Sbjct: 394 HMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHC 453
Query: 328 TIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
D A++ + + A M G P + + L LC+ KS E E
Sbjct: 454 PPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEARE 513
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
+ + + + +Y+V++ L G+L EA V++EM KG P N L+++ C
Sbjct: 514 MMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLC 573
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
R+ A+K ++ GC+ N+ + +I F + E++ AL + +M D
Sbjct: 574 RDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVF 633
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
TYT+L++ L ++ + A E+ K ++ +
Sbjct: 634 TYTTLVDALGKKGRIAEATELMKKMLHKGI 663
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 175/395 (44%), Gaps = 18/395 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ +L + D AL + +G +G+ + C+ ++ + +++E+
Sbjct: 390 NTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLS 449
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + + V +++GFC+ V++A K+L + KP+ ++Y + G
Sbjct: 450 KGHCPPD-VVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKS 508
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E ++ + +P + Y + GL E ++ EA ++ +V F +N L
Sbjct: 509 LEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLL 568
Query: 338 IGSVSSIDPRS--AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
+ S+ D R+ A F + KG + + + C+ ++ D + V + +
Sbjct: 569 LQSLCR-DGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLIN 627
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR----EDLL 451
D+ +Y +V L GR+ EA ++++M KG+DP Y +++ C+ +DL+
Sbjct: 628 KHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLV 687
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
+K+ + C YN +I K +G++E A +L +L DA T +L
Sbjct: 688 AILEKM---ILRQKCK---TIYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYAL 741
Query: 512 LEGLCQETNLQAAFEV----FNKSVNHDVMLARSI 542
+EG + A++V FN+++ DV + +
Sbjct: 742 MEGYLKIGVPLLAYKVACRMFNRNLIPDVKMCEKL 776
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 93/239 (38%), Gaps = 20/239 (8%)
Query: 325 GKFTIDDDV--------LNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
G+F +++D + LIG SS +P+ N L +L
Sbjct: 133 GRFDVEEDESRHPLVREIGRLIGLRSSWNPKHEGQMRNL---------LRSLKPSQVCAV 183
Query: 377 KRNKSDELVEV---YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
R++ DE V + Y Y D Y M+ L + + A V+ MKR+G+
Sbjct: 184 LRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYR 243
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+ +M + R LR A K+ M +G NL N I F +E ALR
Sbjct: 244 TPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFL 303
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M G+ P+ TY ++ G C ++ A E+ + + + + T M LC+
Sbjct: 304 ERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCK 362
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/174 (17%), Positives = 77/174 (44%), Gaps = 4/174 (2%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F P+ + +L+SL + + +++ ++ + +I Q A
Sbjct: 557 GFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAA 616
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
SV +++ + +L+ L G I A ++ +M H+G++ + + + I +
Sbjct: 617 LSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHR 676
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
+C+ K+ ++++L+++ R+ I +I C ++EEA K+L ++
Sbjct: 677 YCQMEKVDDLVAILEKMILRQKC----KTIYNQVIEKLCGLGKLEEADKLLGKV 726
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 125/509 (24%), Positives = 222/509 (43%), Gaps = 20/509 (3%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDS 105
++SPS V+ + + L AL F +W SQ P + HS SY S+L L N
Sbjct: 87 AISPSHVSSLFS--LDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLI----NNGYVG 140
Query: 106 VLKQVKVNKI-TLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
V+ ++++ I + DS + L + N + F + ++ C N+LL L
Sbjct: 141 VVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCY-------NTLLNSL 193
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
A G +D +++ EM V + + + +C KLG V V K + ++
Sbjct: 194 ARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYC---KLGNVEEANQYVSKIVEAGLD 250
Query: 225 GSVIAVL-IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
+I G+C+ K ++ AFKV +E+ ++ C+ + +AY + + + E +
Sbjct: 251 PDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDL 310
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-S 342
K + P Y I L R EA L + + + LI S+ S
Sbjct: 311 FVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCS 370
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
A M+EKG +P + T + L CKR ++ V+V +++ + + +
Sbjct: 371 QCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRT 430
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN ++ C S + +A GV+ +M + + PDV YNSL++ CR A +L M
Sbjct: 431 YNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G + TY +I + +E A LF ++ +KGV P+ YT+L++G C+ +
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLC 551
A + K ++ + + + + LC
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 190/460 (41%), Gaps = 12/460 (2%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
A P+F +Y S++ + +++ V ++ + + Y +I L +
Sbjct: 247 AGLDPDF----FTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 134 NTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+A +F VK ++ P + L+ L AL + EM G++ +
Sbjct: 303 RIDEAMDLF--VKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 360
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ V I C K + +L ++ E ++ + +I+G+CK +E+A V++
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQML--EKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ R+ P+ Y + + + +V + VL K + V P Y I G
Sbjct: 419 MESRKLSPNTRTYNELIKGY-CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
A L ++ D ++I S+ S A F+ + +KG P + +
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L CK K DE + + + + + + ++N ++ LC G+L+EA + ++M + G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L P VS L+ ++ A + QM +SG + TY I + G + A
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ M E GV+PD TY+SL++G AF+V +
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 195/454 (42%), Gaps = 35/454 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+S++ S ++ +L + + D Y +I SL + K ++A +F+
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ + + P + +L+ G +D A M ++M + +++ F I C +
Sbjct: 523 LEQ--KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
KL + ++L+E + S +LI H K + A+ ++ KPD
Sbjct: 581 GKLKEA-TLLEEKMVKIGLQPTVSTDTILI-HRLLKDGDFDHAYSRFQQMLSSGTKPDAH 638
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + G + + E ++ K R+ GV+P Y I G G++
Sbjct: 639 TYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY------------GDL- 685
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIE------KGRVPTLSTLSNLSKNLC 376
G+ DVL + + + + ++E KG P L +SN+ +
Sbjct: 686 --GQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMME--- 740
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR-KGLDPDV 435
D +VE+ + + + + +SY ++ +C G LR A V M+R +G+ P
Sbjct: 741 ----FDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSE 796
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
+N+L+ CC+ A K+ D M G L++ +LI + GE E +F N
Sbjct: 797 LVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQN 856
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+L+ G D + +++G+ ++ ++A +E+FN
Sbjct: 857 LLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFN 890
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 115/534 (21%), Positives = 215/534 (40%), Gaps = 39/534 (7%)
Query: 51 LVARVINPYLLTHHSLALGFF---NWASQQPNFTHSPL--------SYHSILKSLSLSRQ 99
+V ++P T+ SL +G+ + S F PL +Y ++ L ++R+
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 100 INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--C 157
I+ + ++K ++ Y +I SL + +A ++ E++ I P I
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET--GIKPNIHTY 361
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
L+ L S + A ++ +M +G+ + I + I +C K G + +D V
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC---KRGMIEDAVDVVEL 418
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E+ ++ + +I G+CK V +A VL+++ R+ PD + Y + + G+
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+L G+ P Y I L +R+ EA +L + + + + A
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G + A + M+ K +P T + L LC K E + + +
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ + +++ L G AY Q+M G PD Y + ++ CRE L A+
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG- 514
+ +M +G S +L TY+ LI + ++G+ A + M + G P T+ SL++
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Query: 515 --------------LCQETNL---QAAFEVFNKSVNHDVMLARSILSTFMISLC 551
LC +N+ E+ K V H V ++ +C
Sbjct: 718 LEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGIC 771
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 35/210 (16%)
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
DE+ +VY + + ++ +YN MV+ C G + EA + ++ GLDPD Y SL
Sbjct: 200 DEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSL 259
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGN-------------------------------- 469
+ C+ L A K++++M GC N
Sbjct: 260 IMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDEC 319
Query: 470 ---LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
++TY +LI AL L M E G+ P+ TYT L++ LC + + A E
Sbjct: 320 FPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARE 379
Query: 527 VFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+ + + +M + + C+R +I
Sbjct: 380 LLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 126/336 (37%), Gaps = 53/336 (15%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ L DG D+A F +M G + + FI +C +L M+ + RE
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM--AKMRE 665
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD---------------FIAY 264
N + +I G+ + AF VL +R C+P +
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ 725
Query: 265 RIVAEEFKLMGSVFEREVV---LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ E M ++ E + V L+K + V P Y + ILG ICE +G +
Sbjct: 726 KGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILG------ICE---VGNL 776
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
V+ K VF + +G P+ + L CK K
Sbjct: 777 RVAEK------------------------VFDHMQRNEGISPSELVFNALLSCCCKLKKH 812
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+E +V + + +ES V++ L G V Q + + G D + +
Sbjct: 813 NEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKII 872
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
++ ++ L+ +L++ M +GC + +TY++LI
Sbjct: 873 IDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 182/402 (45%), Gaps = 9/402 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALK 175
D++ + ++ L +A VF+ K E P + +L+ L D + AL
Sbjct: 125 DTATFTTLVRGLCVVGKIGEALDVFD--KMVGEGFQPNVVTYGTLMNGLCKDRQLTEALN 182
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIH 234
+F EM +G+ + I C + V ++L+E+ K S I +V+++ +++
Sbjct: 183 LFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVK---SKIMPNVVSLNIVVD 239
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
CK +V EA V+D + +PD + Y + + L + E V + G
Sbjct: 240 ALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVC 299
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFF 353
Y I G +RI +A L E + + + + LI + + + AI F
Sbjct: 300 NVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALF 359
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
N M+ G++P L T S L LCK ++ E + + K + ++ D++ YN+ + +C +
Sbjct: 360 NEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRA 419
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G L A + + +GL PDV +N ++ C+ LL A KL+ +M +GC N TY
Sbjct: 420 GDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTY 479
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
N + + + A++L ML +G + D +T L++ L
Sbjct: 480 NTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKML 521
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/465 (22%), Positives = 200/465 (43%), Gaps = 14/465 (3%)
Query: 82 HSP---LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
H P + +L S++ + + + S+ K++ I D +I S A
Sbjct: 51 HPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFA 110
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
SV ++ +L+ L G I AL +FD+M G + + + +G +
Sbjct: 111 LSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNG 170
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIREC 257
C++ +L + L++ E+ + I+ + +IH C + +L+E+ +
Sbjct: 171 LCKDRQLTEALNLFSEMIAKG---ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKI 227
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
P+ ++ IV + G V E V+ + GV P Y + G + + EA +
Sbjct: 228 MPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVK 287
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+ +++V + N LI I A+ F M + +P T S L LC
Sbjct: 288 VFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLC 347
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+ + + ++ + A ++ +Y++++ +LC + RL EA +++ ++ LDPDV
Sbjct: 348 HVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQ 407
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN ++ CR L A+ L+ + G ++ T+NI+I + G ++ A +LF M
Sbjct: 408 VYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREM 467
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
E G + TY ++ +GL Q A ++ + MLAR
Sbjct: 468 DENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEE------MLARG 506
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 98/197 (49%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
+++ G P +T + L + LC K E ++V+ + + ++ +Y +++ LC +
Sbjct: 117 ILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQ 176
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L EA + EM KG+ PD+ YNSL+ A C + L ++M S N+ + NI
Sbjct: 177 LTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNI 236
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
++ + G++ A + M++ GV PD TY +L++G C + + A +VF+ V +
Sbjct: 237 VVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNG 296
Query: 536 VMLARSILSTFMISLCR 552
+ +T + C+
Sbjct: 297 CVCNVVSYNTLINGYCK 313
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 161/368 (43%), Gaps = 21/368 (5%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN ++Y +++ L RQ+ ++ ++ I+ D Y +I +L +
Sbjct: 158 QPNV----VTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWK 213
Query: 137 KAFSVFNE-VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
++ NE VK I P + N ++ L +G + A + D M GVE + +
Sbjct: 214 HVTTLLNEMVK---SKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYA 270
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL----IIHGFCKGKRVEEAFKVL 249
+ C +++ + + + D + + NG V V+ +I+G+CK +R+++A +
Sbjct: 271 ALMDGHCLRSEMDEAVKVFDMMVR------NGCVCNVVSYNTLINGYCKIQRIDKAMYLF 324
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
+E+ +E P+ + Y + +G + + + + G P Y + L
Sbjct: 325 EEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKN 384
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLN-ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTL 368
R+ EA L + I D V N A+ G + D +A F+ + +G P + T
Sbjct: 385 HRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTH 444
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ + + LCKR DE ++++ + N + +YN + L + + A +++EM
Sbjct: 445 NIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLA 504
Query: 429 KGLDPDVS 436
+G DVS
Sbjct: 505 RGFSADVS 512
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 118/294 (40%), Gaps = 34/294 (11%)
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD IV F + V VL K KLG P T + + GL V +I EA ++
Sbjct: 89 PDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDV 148
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
F+ M+ +G P + T L LCK
Sbjct: 149 ----------------------------------FDKMVGEGFQPNVVTYGTLMNGLCKD 174
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+ E + ++ + A D+ +YN ++ LC + ++ EM + + P+V
Sbjct: 175 RQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSL 234
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
N +++A C+E + A + D M G ++ TY L+ E++ A+++F M+
Sbjct: 235 NIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVR 294
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
G + +Y +L+ G C+ + A +F + +++ ST + LC
Sbjct: 295 NGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCH 348
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 95/205 (46%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F+ M+ P + + L ++ K ++ + K + + D+ + ++++
Sbjct: 40 ALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVIN 99
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C R+ A V+ ++ + G PD + + +L+ C + A ++D+M G
Sbjct: 100 SFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQP 159
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ TY L++ + ++ AL LF M+ KG++PD TY SL+ LC + +
Sbjct: 160 NVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLL 219
Query: 529 NKSVNHDVMLARSILSTFMISLCRR 553
N+ V +M L+ + +LC+
Sbjct: 220 NEMVKSKIMPNVVSLNIVVDALCKE 244
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 207/460 (45%), Gaps = 11/460 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y +++ L SR+ N ++L ++ ++ + VY +I ++ N +AF + E
Sbjct: 293 FTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKE 352
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ ++L+ L G +D A + +M TI + + I +
Sbjct: 353 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHS 412
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+L E+ EN+ I+ +V ++IHG C+ E+A +L+E+ + KP+
Sbjct: 413 KKDAFRLLSEM---ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFV 469
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + G+V + K K+ V P Y I GL R+ E+ + +
Sbjct: 470 YAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQ 529
Query: 324 SGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
++ + LI G + + D SA M++ G P +L ++ K + +
Sbjct: 530 ERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIE 589
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
++ +K + D Y +++ L +SG + A+ V+ +++ G PDV Y+SL+
Sbjct: 590 KVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLI 649
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
C+ A + D+M G N+ YN LI + G+I A +F+++L KG+
Sbjct: 650 SGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLV 709
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
P+ TYTSL++G C+ ++ AF ++N+ MLA I
Sbjct: 710 PNCVTYTSLIDGSCKVGDISNAFYLYNE------MLATGI 743
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 165/364 (45%), Gaps = 38/364 (10%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D A K+ EM RG +T+ + V I C + + + ++ + ++
Sbjct: 239 DTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME--DYGLVPDGFTYG 296
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I+G CK +R EA +LDE+ E KP+ + Y + + F G+ E ++K+
Sbjct: 297 ALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAA 356
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
GV P Y + GL C+ ++ D + L+ + R
Sbjct: 357 GVQPNKITYDNLVRGL------CKMGQM-------------DRASLLLKQMVRDSHRPDT 397
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV-LSANDYFTDMESYNVMVSF 409
+ +N +IE G ++ K++ L E+ +S N Y +Y++M+
Sbjct: 398 ITYNLIIE-GHF----------RHHSKKDAFRLLSEMENAGISPNVY-----TYSIMIHG 441
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC SG +A +++EM KGL P+ Y L+ CRE + A +++D+M +
Sbjct: 442 LCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 501
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
L YN LI S+VG +E + + F M E+G+ P+ TY+ L+ G + +L++A ++
Sbjct: 502 LYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQ 561
Query: 530 KSVN 533
+ ++
Sbjct: 562 RMLD 565
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 99/459 (21%), Positives = 204/459 (44%), Gaps = 12/459 (2%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
A QPN ++Y ++++ L Q++ +LKQ+ + D+ Y II +
Sbjct: 356 AGVQPN----KITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHH 411
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIG 191
+ + AF + +E++ I P + + + L G + A + +EM+ +G++ +
Sbjct: 412 SKKDAFRLLSEME--NAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFV 469
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ I +C + + D++ K +++ +I G K RVEE+ K +
Sbjct: 470 YAPLISGYCREGNVSLACEIFDKMTKV--NVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 527
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
++ R P+ Y + + G + E ++++ G+ P Y + +
Sbjct: 528 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 587
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK-GRVPTLSTLSN 370
I + + ++ +D+ + LI ++SS A IEK G VP + S+
Sbjct: 588 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 647
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LCK ++ + +S ++ YN ++ LC SG + A V + KG
Sbjct: 648 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 707
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L P+ Y SL++ C+ + A L+++M A+G + + Y++L + S G++E A+
Sbjct: 708 LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM 767
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
L M +G A +++ +L++G C+ +Q ++ +
Sbjct: 768 FLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLH 805
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 133/305 (43%), Gaps = 34/305 (11%)
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
+ +CK + + A KVL E+R R C + + Y ++ G+V E K G+
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVF 352
P Y I GL RR EAK AL+ +S + + +V
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAK-------------------ALLDEMSCAELKPNVVV 329
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
+ +NL + +DE ++ K + A + +Y+ +V LC
Sbjct: 330 Y---------------ANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK 374
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G++ A ++++M R PD YN ++E R + A +L +M +G S N+ T
Sbjct: 375 MGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYT 434
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
Y+I+I + GE E A L M KG+ P+A Y L+ G C+E N+ A E+F+K
Sbjct: 435 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 494
Query: 533 NHDVM 537
+V+
Sbjct: 495 KVNVL 499
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 167/396 (42%), Gaps = 3/396 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+A L G ++ A +M G+ +G I C++ + + ++LDE+
Sbjct: 261 NVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC 320
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E + V+ +I GF + +EAFK++ E+ +P+ I Y + MG +
Sbjct: 321 AE--LKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQM 378
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
++LK+ + P T Y I G +A L + + + + + +
Sbjct: 379 DRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIM 438
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G S +P A M KG P + L C+ E++ ++ +
Sbjct: 439 IHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV 498
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ YN ++ L GR+ E+ +M+ +GL P+ Y+ L+ + L A++
Sbjct: 499 LPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQ 558
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L +M +G N Y L+ + + +IE F +ML++GV D Y L+ L
Sbjct: 559 LVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLS 618
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
N++AAF V + + + + S+ + LC+
Sbjct: 619 SSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCK 654
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 123/538 (22%), Positives = 219/538 (40%), Gaps = 36/538 (6%)
Query: 43 LRDSLSP-SLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQ 99
+RDS P ++ +I HHS F S+ N SP +Y ++ L S +
Sbjct: 389 VRDSHRPDTITYNLIIEGHFRHHSKK-DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 447
Query: 100 INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI-C- 157
+L+++ + ++ VY +I + N A +F+ K ++ P++ C
Sbjct: 448 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFD--KMTKVNVLPDLYCY 505
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NSL+ L+ G ++ + K F +M RG+ + + I + +N L ++ R
Sbjct: 506 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQ--RM 563
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + VI + ++ + K +E+ + + D Y I+ G++
Sbjct: 564 LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 623
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--N 335
VL K G P + Y I GL + K G + K +D +++ N
Sbjct: 624 EAAFRVLSGIEKNGSVPDVHVYSSLISGLC--KTADREKAFGILDEMSKKGVDPNIVCYN 681
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
ALI G S D A FN ++ KG VP T ++L CK +Y + A
Sbjct: 682 ALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLAT 741
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D Y+V+ + ++G L +A +I+EM +G +S +N+L++ C+ ++
Sbjct: 742 GITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQET 800
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEI---------------EGALR----LFHN 495
KL + G N T +IS SE G++ E A R LF +
Sbjct: 801 LKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMD 860
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
M+ +G P ++ C+E NL A + + V + S + +LCR+
Sbjct: 861 MINQGKIP-LDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRK 917
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 152/364 (41%), Gaps = 24/364 (6%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y +L+S S I + S K + + LD+ +Y +I +L N + AF V + ++
Sbjct: 575 YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIE 634
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
N + +SL++ L + A + DEMS +GV+ + + + I C++ +
Sbjct: 635 KNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDIS 694
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
++ + + + ++ V +I G CK + AF + +E+ PD Y +
Sbjct: 695 YARNVFNSILAK--GLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSV 752
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV--- 323
+ G + E+ + L ++ L + + + G ++ E +L VI+
Sbjct: 753 LTTGCSSAGDL-EQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRG 811
Query: 324 -----------------SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
+GK + + L S R F MI +G++P L
Sbjct: 812 LVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-LD 870
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
+ ++ ++ CK D+ + + V+ A SY +V LC G+L EA +++EM
Sbjct: 871 VVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEM 930
Query: 427 KRKG 430
++G
Sbjct: 931 DKRG 934
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 145/366 (39%), Gaps = 29/366 (7%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
I+ F M +GV +G+ I + + +L + K NGSV
Sbjct: 588 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEK------NGSVPD 641
Query: 230 VLI----IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
V + I G CK E+AF +LDE+ + P+ + Y + + G + V
Sbjct: 642 VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFN 701
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSI 344
G+ P Y I G I A L +++ T D V + L G S+
Sbjct: 702 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 761
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
D A+ M +G ++S+ +NL CKR K E +++ V+ + +
Sbjct: 762 DLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIE 820
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
++S L +G+L E + + E+++K + ++SL D++ K D
Sbjct: 821 NIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLF-----MDMINQGKIPLD----- 870
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
+ +I + G ++ AL L ++ K ++Y ++++ LC++ L A
Sbjct: 871 -------VVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEA 923
Query: 525 FEVFNK 530
+ +
Sbjct: 924 LNLLKE 929
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M E+G T + L LC+ +E K + D +Y +++ LC S R
Sbjct: 248 MRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRR 307
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
EA ++ EM L P+V Y +L++ RE A K+ +M A+G N TY+
Sbjct: 308 SNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDN 367
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
L+ ++G+++ A L M+ PD TY ++EG + + + AF + ++ N
Sbjct: 368 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAG 427
Query: 536 VMLARSILSTFMISLCR 552
+ S + LC+
Sbjct: 428 ISPNVYTYSIMIHGLCQ 444
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%)
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
+ S +EA C+ AKK+ +M GC N TYN+LI+ G +E A +M
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284
Query: 498 EKGVAPDATTYTSLLEGLCQ 517
+ G+ PD TY +L+ GLC+
Sbjct: 285 DYGLVPDGFTYGALINGLCK 304
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/515 (22%), Positives = 214/515 (41%), Gaps = 53/515 (10%)
Query: 64 HSLALGFFNWASQQPNFTH----SPL----SYHSILKSL-SLSRQINAIDSVLKQVKVNK 114
H A F N +F H PL + +L ++ + + + + S+ KQ+++
Sbjct: 69 HDDACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAG 128
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEICN--SLLAVLASDGYID 171
++ + +I + AFSV ++ K + P I +L+ L G
Sbjct: 129 LSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQ---PTIVTFTTLINWLCKVGKFA 185
Query: 172 NALKMFDEMSHRGVEFSTIGFGVFIWKFC---ENAKLGQVLSMLDEVRKRENSMINGSVI 228
A+++FD+M RG + I C E A +L ++E + N + ++I
Sbjct: 186 QAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTII 245
Query: 229 AVL------------------------------IIHGFCKGKRVEEAFKVLDELRIRECK 258
+I G C + +EA +L+E+R
Sbjct: 246 DSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIM 305
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD + + ++ + G V E + VLK ++GV P Y + G + + EA++L
Sbjct: 306 PDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKL 365
Query: 319 GEVIVSGKFTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ +++ D N LI V ID A FN MI +G P + + L L
Sbjct: 366 FDAMITKGCKPDVFSYNILINGYCKVKRID--EAKQLFNEMIHQGLTPNNVSYNTLIHGL 423
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C+ E ++K + N ++ +Y++++ C G +A+ + + M+ P++
Sbjct: 424 CQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNL 483
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YN L++A C+ LR A+KL+ ++F G N + Y +I+ + G ++ AL F N
Sbjct: 484 VMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRN 543
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
M E G PD +Y ++ G + A ++ +
Sbjct: 544 MEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGE 578
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 168/388 (43%), Gaps = 3/388 (0%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D A + ++ G++ + + F I C+ K Q + + D++ R
Sbjct: 149 VDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVAR--GCRPDVYTY 206
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
II+G CK A +L ++ C+P+ + Y + + + V E + +
Sbjct: 207 TTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKV 266
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS- 348
G++P Y I GL + EA L + S D N L+ ++ S
Sbjct: 267 KGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSE 326
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A M E G P + T S+L R++ E +++ + D+ SYN++++
Sbjct: 327 AQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILIN 386
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C R+ EA + EM +GL P+ YN+L+ C+ LR A+ L+ M +G
Sbjct: 387 GYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLP 446
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
NL TY+IL+ F + G A RLF M P+ Y L++ +C+ NL+ A ++F
Sbjct: 447 NLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLF 506
Query: 529 NKSVNHDVMLARSILSTFMISLCRRVLI 556
++ + I +T + LC+ L+
Sbjct: 507 SELFVKGLQPNAQIYTTIINGLCKEGLL 534
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 151/342 (44%), Gaps = 3/342 (0%)
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
D ++ AL +F M +G+ + I C ++ + ++L+E+R +++
Sbjct: 251 DRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSL--NIMPDI 308
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
V +++ CK +V EA VL + +PD + Y + + L V E +
Sbjct: 309 VTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDA 368
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP 346
G P Y I G +RI EAK+L ++ T ++ N LI + +
Sbjct: 369 MITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGS 428
Query: 347 -RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
R A F M G +P L T S L CK+ + +++ + + ++ YN+
Sbjct: 429 LREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNI 488
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++ +C SG LR+A + E+ KGL P+ Y +++ C+E LL A + + M G
Sbjct: 489 LIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDG 548
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
C + +YN++I F + A++L M +KG D T
Sbjct: 549 CPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 98/200 (49%), Gaps = 5/200 (2%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS-DELVEVYKVLSANDYFTDMESYNVMV 407
A+ FN M+ + +P + + L + K + D ++ + K + ++ + ++++
Sbjct: 81 ALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILI 140
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+ R+ A+ V+ ++ + GL P + + +L+ C+ A +L+D M A GC
Sbjct: 141 NCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCR 200
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
++ TY +I+ ++GE A L M E G P+ TY+++++ ++ + A ++
Sbjct: 201 PDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDI 260
Query: 528 FN----KSVNHDVMLARSIL 543
F+ K ++ D+ S++
Sbjct: 261 FSYMKVKGISPDIFTYNSLI 280
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 176/397 (44%), Gaps = 11/397 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEI--CNSLLAVLASDGYIDNAL 174
D Y +I L + NT A + V+ NC+ P + N+++ L D + A
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQ---PNVFAYNTIIDSLCKDRQVTEAF 221
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LII 233
+F EM +G+ + I C + V ++L+E+ +S I V++ ++
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEM---VDSKIMPDVVSFNTVV 278
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
CK +V EA V+D++ R +P+ + Y + + L+ + E V G
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVF 352
P Y I G +RI +A L + + D + LI + ++ + AI
Sbjct: 339 PNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIAL 398
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F+ M+ ++P L T L LCK E + + K + ++ D++ N+ + +C
Sbjct: 399 FHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCR 458
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
+G L A + + KGL PDV Y+ ++ CR LL A KL+ +M +GC+ N
Sbjct: 459 AGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCI 518
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
YN + F E A++L M+ +G + DA+T T
Sbjct: 519 YNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMT 555
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 167/365 (45%), Gaps = 5/365 (1%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
ID A+ F+ M ST+ F + AK+ ++L + ++ I ++
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSI---AKMKHHSTLLSLSHQMDSFGIPPNIYT 98
Query: 230 V-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+ ++I+ FC RV AF VL ++ +PD + + + G + E + K
Sbjct: 99 LHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMI 158
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPR 347
G P Y I GL A L +V + N +I S+
Sbjct: 159 GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVT 218
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A F+ M+ KG P + T ++L LC + + + + + D+ S+N +V
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
LC G++ EA+ V+ +M ++G++P+V Y +LM+ C + A K++D M GC
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N+ +YN LI+ + ++ I+ A+ LF M + + PD TY++L+ GLC LQ A +
Sbjct: 339 PNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIAL 398
Query: 528 FNKSV 532
F++ V
Sbjct: 399 FHEMV 403
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 190/450 (42%), Gaps = 21/450 (4%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
+ + +HS L LSLS Q+++ + N TL +I S AFSV
Sbjct: 72 AKMKHHSTL--LSLSHQMDSFG-----IPPNIYTL-----HILINSFCHLNRVGFAFSVL 119
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ +L+ + +G I AL +FD+M G + +G I C+
Sbjct: 120 AKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKV 179
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ +L + ++ +V A II CK ++V EAF + E+ + PD
Sbjct: 180 GNTSAAIRLLGSMVQKN---CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDI 236
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
Y + + +L + + P + + L E ++ EA ++ +
Sbjct: 237 FTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDK 296
Query: 322 IVSGKFTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
++ + AL+ +S +D A+ F+ M+ KG +P + + + L CK
Sbjct: 297 MIQRGVEPNVVTYTALMDGHCLLSEMD--EAVKVFDTMVCKGCMPNVISYNTLINGYCKI 354
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+ D+ + ++ + + D +Y+ ++ LC RL++A + EM P++ Y
Sbjct: 355 QRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTY 414
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
L++ C+ L A L + S +++ NI I GE+E A LF N+
Sbjct: 415 RILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS 474
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
KG+ PD TY+ ++ GLC+ L A ++F
Sbjct: 475 KGLQPDVWTYSIMINGLCRRGLLDEASKLF 504
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 133/295 (45%), Gaps = 1/295 (0%)
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
P+ I+ F + V VL K KLG P T + I G+ VE +I EA L
Sbjct: 94 PNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHL 153
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ ++ F D LI + + + +AI M++K P + + + +LCK
Sbjct: 154 FDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCK 213
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ E ++ + D+ +YN ++ LC + ++ EM + PDV
Sbjct: 214 DRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS 273
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
+N++++A C+E + A + D+M G N+ TY L+ + E++ A+++F M+
Sbjct: 274 FNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMV 333
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
KG P+ +Y +L+ G C+ + A +F + +++ ST + LC
Sbjct: 334 CKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCH 388
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 1/220 (0%)
Query: 334 LNALIGSVSSIDPRSAIVFFNFMIEK-GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
N L+ S++ + S ++ + ++ G P + TL L + C N+ V +
Sbjct: 64 FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ D ++ ++ + G++ EA + +M +G PDV Y +L+ C+
Sbjct: 124 KLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A +L M C N+ YN +I + ++ A LF M+ KG++PD TY SL+
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLI 243
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
LC + + N+ V+ +M +T + +LC+
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCK 283
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 101/208 (48%), Gaps = 5/208 (2%)
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
AI FN M+ P+ + L ++ K L+ + + + ++ + ++++
Sbjct: 44 GAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILI 103
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+ C R+ A+ V+ ++ + G PD + + +L+ E + A L+D+M G
Sbjct: 104 NSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFR 163
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
++ TY LI+ +VG A+RL +M++K P+ Y ++++ LC++ + AF +
Sbjct: 164 PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNL 223
Query: 528 FN----KSVNHDVMLARSILSTFMISLC 551
F+ K ++ D+ S++ + +LC
Sbjct: 224 FSEMVTKGISPDIFTYNSLIHA-LCNLC 250
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 55/134 (41%)
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A M R P +N L+ + + L QM + G N+ T +ILI+
Sbjct: 45 AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
F + + A + +L+ G PD T+T+L+ G+ E + A +F+K +
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRP 164
Query: 539 ARSILSTFMISLCR 552
T + LC+
Sbjct: 165 DVVTYGTLINGLCK 178
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 5/311 (1%)
Query: 219 ENSMINGSVIAV----LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+ + NG I + I+ K K+++EA +++++ C P Y + M
Sbjct: 23 QETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKM 82
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G + E +L+K G P Y I GL ++R EA +L + + S +D
Sbjct: 83 GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCY 142
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
ALI G + + A + M +G VP + TLS + LCK + V ++K + A
Sbjct: 143 TALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEA 202
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ Y+ ++ LC + ++ A ++ +MK+ PD YN L++ C+ +
Sbjct: 203 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAA 262
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A+ +D+M +GC ++ TYNILIS F + G + A +F +M +P+ TY +L+
Sbjct: 263 ARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLIS 322
Query: 514 GLCQETNLQAA 524
GLC+ L A
Sbjct: 323 GLCKRRQLTKA 333
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 167/372 (44%), Gaps = 3/372 (0%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ L G + A + E + G + + +N K+ + +++++++
Sbjct: 5 LINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANG 64
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+ + A+L +G CK R+EEA +L ++ C PD + Y + + FE
Sbjct: 65 CTPTIATYNALL--NGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFE 122
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
+ K+ G+A T Y I GL+ +I +A + + + S D L+ +I
Sbjct: 123 AYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMID 182
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G + +A+ F M +G P S L LCK K D +E+ +
Sbjct: 183 GLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 242
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D +YN+++ LC SG + A EM G PDV YN L+ C+ A ++
Sbjct: 243 DTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVF 302
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
D M +S CS N+ TY LIS + ++ A + +M E+G PD+ Y+SL++GLC+
Sbjct: 303 DDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKS 362
Query: 519 TNLQAAFEVFNK 530
L+ +F++
Sbjct: 363 GKLEGGCMLFDE 374
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 186/429 (43%), Gaps = 9/429 (2%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLA 162
S+ ++ N T+D Y I+ L + K Q+A ++ ++ N P I N+LL
Sbjct: 20 SLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITAN--GCTPTIATYNALLN 77
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
L G ++ A+ + ++ G + + I + + + + E+ R ++
Sbjct: 78 GLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLAL 137
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+V +I G + ++ +A V + + C PD + + + G +
Sbjct: 138 --DTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVR 195
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSV 341
+ K G+AP Y I GL R++ A E+ + T D N LI G
Sbjct: 196 IFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLC 255
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
S D +A FF+ M+E G P + T + L CK +D V+ +S++ ++
Sbjct: 256 KSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVV 315
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y ++S LC +L +A Q MK +G PD Y+SL++ C+ L L+D+M
Sbjct: 316 TYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM 375
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
SG + N +T LI + ++ A+ LF+ + ++G+ P Y S++ L + +
Sbjct: 376 ERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKV 433
Query: 522 QAAFEVFNK 530
V+ +
Sbjct: 434 NEGQAVYQE 442
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 9/349 (2%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
T ++Y S++ L ++ + K++ + LD+ Y +I L+Q +A S
Sbjct: 101 TPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASS 160
Query: 141 VFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
V+ + + P++ ++++ L G I A+++F M RG+ + + + I
Sbjct: 161 VYKTM--TSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 218
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C+ K+ L ML +++K + ++ ++I G CK V A DE+ CK
Sbjct: 219 LCKARKMDCALEMLAQMKKAFCT--PDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCK 276
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD Y I+ F G+ V +P Y I GL R++ +A
Sbjct: 277 PDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLY 336
Query: 319 GEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ + D V ++L+ G S + F+ M E+ V T + L +LCK
Sbjct: 337 YQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM-ERSGVANSQTRTRLIFHLCK 395
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
N+ DE V ++ + + +YN ++S L SG++ E V QEM
Sbjct: 396 ANRVDEAVSLFNAIR-KEGMPHPYAYNSIISALIKSGKVNEGQAVYQEM 443
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%)
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+ N D+ +Y +V +L + +++EA +++++ G P ++ YN+L+ C+ L
Sbjct: 26 TTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRL 85
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A L ++ +GC+ ++ TY LI + A +LF M +G+A D YT+L
Sbjct: 86 EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTAL 145
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ GL Q + A V+ + + LST + LC+
Sbjct: 146 IRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCK 186
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 79/137 (57%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+++++++ L +G L +A+ + QE G D+ Y ++++ + ++ A L +++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
A+GC+ + TYN L++ ++G +E A+ L +++ G PD TYTSL++GL ++
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 522 QAAFEVFNKSVNHDVML 538
A+++F + + + L
Sbjct: 121 FEAYKLFKEMASRGLAL 137
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/495 (22%), Positives = 208/495 (42%), Gaps = 43/495 (8%)
Query: 83 SPLSYHSILKSLSLSRQI-NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSV 141
SP+ + +LK L R+ +A+D VL+++ D Y ++ L K +Q+A +
Sbjct: 133 SPILFSPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDL 192
Query: 142 FN---EVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ + K C + +++ L +G +D A +FD M RG + + I
Sbjct: 193 LHIMADHKGRCP-LDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISA 251
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
+ + + + R +N ++ ++ ++HG+C + +EA + ++ +
Sbjct: 252 LSKTQAMDKATQVF--TRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVE 309
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD + Y + + G E + K G P + Y + G E + E +L
Sbjct: 310 PDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDL 369
Query: 319 GEVIVSGKFTIDDDVLNALIGSVS------------------SIDPR------------- 347
++++ + + N ++G+ + ++P
Sbjct: 370 LDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCT 429
Query: 348 -----SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
A+ FN + +G P + + L LC +K D++ E+ + D
Sbjct: 430 AGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIF 489
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+N ++ LC GR+ EA + M R G++P+ + YN+L++ C + + A KL M
Sbjct: 490 FNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMV 549
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
+G + TYN +I+ +S+ G IE L L M KGV P TY LL+GL Q
Sbjct: 550 FNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTV 609
Query: 523 AAFEVFNKSVNHDVM 537
AA E++ + + D +
Sbjct: 610 AAKELYLRMIKWDTV 624
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 168/394 (42%), Gaps = 14/394 (3%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G +D A + G+ S I F + C+ + + ++ +R+ +
Sbjct: 113 GRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIV--LRRMPELGCKPDL 170
Query: 228 IA-VLIIHGFCKGKRVEEAFKVLDELRIRE--CKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+ +++ G C K ++A +L + + C D +AY V G + + +
Sbjct: 171 FSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLF 230
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSS 343
G +P Y I L + + +A ++ +V D + +L+ G SS
Sbjct: 231 DAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSS 290
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
P+ AI F M G P + T + L LCK KS E +++ L + D +Y
Sbjct: 291 GKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTY 350
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
++ T G L E + ++ M +KG+ +N +M A + + + A ++ M
Sbjct: 351 GTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQ 410
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ----ET 519
G + ++ Y ++ G ++ AL F+++ +G+AP+ +T+L+ GLC +
Sbjct: 411 QGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDK 470
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ AFE+ ++ + D + +I+ +LC++
Sbjct: 471 VEELAFEMIDRGICLDTIFFNAIMG----NLCKK 500
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 119/529 (22%), Positives = 225/529 (42%), Gaps = 47/529 (8%)
Query: 30 WTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPL---- 85
W P LE L L LR SL P V V+ L T +AL FF WA +Q + H P+
Sbjct: 178 WNPKLEGELRHL-LR-SLKPRQVCAVLQ--LQTDERVALRFFYWADRQWRYRHDPIRRPE 233
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
++ ++ S S + ++ VL ++ I D S+ I L+ G KA +
Sbjct: 234 AFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERM 293
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ +I P + N L+ +++A+++ EM +G I + + C+
Sbjct: 294 QI--VEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEK 351
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
++ +V +++++ K N ++ V +H K +EA + L E R + D +
Sbjct: 352 RIKEVRLLMEKMLKDSN-LLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVG 410
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + F G + + + ++ + G P Y I GL ER++ +AK++
Sbjct: 411 YSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKM----- 465
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
M + G P + + L LCK S E
Sbjct: 466 -----------------------------LRQMYKHGCKPNTVSYTALLNGLCKNGNSLE 496
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
E+ + + + + +Y+V++ G+ EA +++EM +KG P N L++
Sbjct: 497 AREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQ 556
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+ C+E+ + AK+ +Q +GC+ N+ + +I F + ++E AL L +M P
Sbjct: 557 SLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHP 616
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
D TYT++++ L ++ ++ A ++ K + ++ T + CR
Sbjct: 617 DVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCR 665
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 169/401 (42%), Gaps = 19/401 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+ + +L+ G+ D AL+ E R +G+ + FC ++ + +++E+
Sbjct: 377 NTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFS 436
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ I V +I+G C+ ++V++A K+L ++ CKP+ ++Y + G+
Sbjct: 437 K--GCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNS 494
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E ++ + P Y + G E + EA +L ++ F +N L
Sbjct: 495 LEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLL 554
Query: 338 IGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I S+ + A F + G + + + C+++ + + + + ++
Sbjct: 555 IQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNK 614
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR----EDLLR 452
D+ +Y ++ L GR+ EA + +M R GL P Y +++ CR EDLL
Sbjct: 615 HPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLL- 673
Query: 453 PAKKLWDQMFA-SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
KL ++M + C YN +I K G +E A +L +L DA T L
Sbjct: 674 ---KLLEKMLSRQECR---TAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHML 727
Query: 512 LEGLCQE----TNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
+E + + A +FN+++ D+ L + M+
Sbjct: 728 IESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLML 768
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 153/401 (38%), Gaps = 76/401 (18%)
Query: 191 GFGVFIWKFCENAKLG---QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
FG + + KL +VL+M+ + + I + I VL++ G R+++A +
Sbjct: 234 AFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVM-----GNRLDKAVR 288
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
L+ ++I E +P+ I Y + + + + + + ++ + G +P Y + L
Sbjct: 289 FLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLC 348
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
E+RI E + L E K D ++L P T
Sbjct: 349 KEKRIKEVRLLME-----KMLKDSNLL----------------------------PDQVT 375
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ L K DE +E + + D Y+ +V C GR+ +A ++ EM
Sbjct: 376 YNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMF 435
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK---------------- 471
KG PDV Y S++ C+E + AKK+ QM+ GC N
Sbjct: 436 SKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSL 495
Query: 472 -------------------TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
TY++L+ F G+ A L M++KG P L+
Sbjct: 496 EAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLI 555
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ LCQE + A + +N+ + +T + C++
Sbjct: 556 QSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQK 596
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 100/502 (19%), Positives = 211/502 (42%), Gaps = 63/502 (12%)
Query: 56 INPYLLTHHSLALGFFNWA---------SQQPNFTHSP--LSYHSILKSLSLSRQINAID 104
I P ++T++ L G+ + ++ P SP +SY++++ L ++I +
Sbjct: 298 IEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVR 357
Query: 105 SVL-KQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV---KFNCEDIGPEICNSL 160
++ K +K + + D Y + L + + +A E +F + +G +++
Sbjct: 358 LLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVG---YSAI 414
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
+ +G +D A ++ +EM +G + + I C+ K+ Q ML ++ K +
Sbjct: 415 VHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYK--H 472
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
+V +++G CK EA ++++ P+ I Y ++ F+ G E
Sbjct: 473 GCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEA 532
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE---------------VIVSG 325
++++ K G P + I L E ++ EAK E ++ G
Sbjct: 533 CDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHG 592
Query: 326 KFTIDDDVLNAL--IGSVSSIDPRSAIVFFNFMIE----KGRV----------------P 363
F DD+ AL + + + +V + +I+ KGR+ P
Sbjct: 593 -FCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIP 651
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVY-KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
T T + C+ + ++L+++ K+LS + T +YN ++ LC+ G L +AY +
Sbjct: 652 TPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRT---AYNQVIEKLCSFGNLEQAYKL 708
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ ++ R D + + L+E+ + + + + +MF +LK + K
Sbjct: 709 LGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLML 768
Query: 483 VGEIEGALRLFHNMLEKG-VAP 503
G+ E A +L +E+G ++P
Sbjct: 769 EGKSEEADKLILRFVERGRISP 790
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 177/412 (42%), Gaps = 36/412 (8%)
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
+ A + +E+ + + S++A+L + G + +AL++ ++M+ GV + F
Sbjct: 304 ENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTV 363
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
I FC L + +E++KR + V +I+G C+ ++EA +VL E+ +
Sbjct: 364 ISGFCSKGDLAAARRLFEEMQKR--GLAADRVTHTALINGLCRAGELKEADRVLQEMVDK 421
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
D + Y ++ + + G++ E V + VAP Y GL +
Sbjct: 422 GLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQ------ 475
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
G+V R+A + M KG + T ++L L
Sbjct: 476 ---GDV-------------------------RAANELLHEMCNKGLELNVYTYNSLINGL 507
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
CK ++ + + + A + TD+ +Y ++ LC SG A+ ++QEM KG+ P +
Sbjct: 508 CKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSI 567
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
+ YN LM C + KKL + M N+ TYN L+ ++ ++ ++
Sbjct: 568 ATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKG 627
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
M + VAP+ TY L++G C+ N++ A + + + L S S +
Sbjct: 628 MHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALI 679
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/485 (20%), Positives = 199/485 (41%), Gaps = 39/485 (8%)
Query: 66 LALGFFNWASQQPNFTHSP---LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVY 122
L+ G A Q + SP ++Y +++ + ++ +L ++ + +++VY
Sbjct: 266 LSAGRLKDACQHFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVY 325
Query: 123 RFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSH 182
+I L A V ++ + + + ++++ S G + A ++F+EM
Sbjct: 326 TSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQK 385
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRV 242
RG+ + I C +L + +L E+ + + V ++I G+CK +
Sbjct: 386 RGLAADRVTHTALINGLCRAGELKEADRVLQEMVDK--GLDVDVVTYTVLIDGYCKRGNM 443
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
EAF+V +E+ R P+ + Y +++ G V +L + G+ Y
Sbjct: 444 VEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSL 503
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRV 362
I GL C+ L + A+ M G
Sbjct: 504 INGL------CKFGNLEQ----------------------------AMRIMTEMEAAGHR 529
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
+ T + L LCK + D + + + + +YNV+++ C SGR+ +
Sbjct: 530 TDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKL 589
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
++ M K + P+V YNSLM+ C + ++ +++ M + + N TYNILI +
Sbjct: 590 LEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCK 649
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
++ AL M+EKG+ A++Y++L+ L ++ A F+K N + +
Sbjct: 650 ARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDV 709
Query: 543 LSTFM 547
S +M
Sbjct: 710 YSFYM 714
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 161/399 (40%), Gaps = 49/399 (12%)
Query: 154 PEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
PE CN++L+ L +D A+ +F E+ + V + + +L D
Sbjct: 228 PESCNAVLSRLP----LDEAIALFRELPDKNV----CSHNILLKALLSAGRLKDACQHFD 279
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
E+ + + G+ ++HG+C +E A K+LDE+ + + + Y V
Sbjct: 280 EMSSPPDVVTYGT-----MVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCN 334
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
G V + VL+ GVA +D V
Sbjct: 335 KGQVSDALRVLEDMTMHGVA-----------------------------------LDAVV 359
Query: 334 LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
+I G S D +A F M ++G T + L LC+ + E V + +
Sbjct: 360 FTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMV 419
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D+ +Y V++ C G + EA+ V EM + + P+V Y +L + C++ +R
Sbjct: 420 DKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVR 479
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A +L +M G N+ TYN LI+ + G +E A+R+ M G D TYT+L+
Sbjct: 480 AANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLI 539
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+ LC+ A + + ++ + + + + M C
Sbjct: 540 DTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFC 578
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 107/205 (52%)
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
+A+ + M KG + +++ LC + + + + V + ++ + D + ++
Sbjct: 305 NAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVI 364
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
S C+ G L A + +EM+++GL D + +L+ CR L+ A ++ +M G
Sbjct: 365 SGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLD 424
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
++ TY +LI + + G + A R+ + M+ + VAP+ TYT+L +GLC++ +++AA E+
Sbjct: 425 VDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANEL 484
Query: 528 FNKSVNHDVMLARSILSTFMISLCR 552
++ N + L ++ + LC+
Sbjct: 485 LHEMCNKGLELNVYTYNSLINGLCK 509
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 127/271 (46%), Gaps = 10/271 (3%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+L++ R+ G++P + L ++ I +EL + V + +L AL+ +
Sbjct: 215 LLRRLRQYGLSPSPESCNAVLSRLPLDEAIALFRELPDKNVCSH----NILLKALLSAGR 270
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
D A F+ E P + T + C R + + V++ ++A ++
Sbjct: 271 LKD---ACQHFD---EMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATV 324
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y +++ LC G++ +A V+++M G+ D + +++ C + L A++L+++M
Sbjct: 325 YTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQ 384
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G + + T+ LI+ GE++ A R+ M++KG+ D TYT L++G C+ N+
Sbjct: 385 KRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMV 444
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
AF V N+ V V + LC++
Sbjct: 445 EAFRVHNEMVGRRVAPNVVTYTALSDGLCKQ 475
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 202/466 (43%), Gaps = 35/466 (7%)
Query: 54 RVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVN 113
R INP ++T+ +L GFF + Q YH D + + VKVN
Sbjct: 443 RGINPNVVTYGTLIDGFFKFQGQDAALE----VYH---------------DMLCEGVKVN 483
Query: 114 KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNA 173
K +DS ++ L Q ++A ++F + + + +L+ L G + A
Sbjct: 484 KFIVDS-----LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTA 538
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR----KRENSMINGSVIA 229
K E+ R + + + VFI C K + S L E+R K + S N +++
Sbjct: 539 FKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVS 598
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
C+ +A K+L E+++ KP+ I Y + G+V + + +L +
Sbjct: 599 ------HCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRS 348
G +P + +R + RR+ ++ E +++ D V N L+ + R
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A V M+ G P T + L CK + D Y + + ++ ++N ++
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L + GR+ EA V+ EM++ GL+P+ Y+ L ++ A +L+ +M G
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVP 832
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+ TYN LIS F++ G + A LF +M ++GV P + TY L+ G
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 113/521 (21%), Positives = 203/521 (38%), Gaps = 74/521 (14%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+ Y++++ + Q++A VL +K + + + Y I + K ++AF ++
Sbjct: 205 VGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEG 264
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ N + ++L+A L DG A +F EM G + + + I + +
Sbjct: 265 MVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGR 324
Query: 205 LGQVLSMLDEVRKR----------------------------------ENSMINGSVIAV 230
++LS+L E+ R +N NG V
Sbjct: 325 GKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTV 384
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
LI CK V+EA +VL E+ + P+ + + V F G + + + ++
Sbjct: 385 LI-DALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKER 443
Query: 291 GVAPRTNDYREFILGL-----------IVERRICEAKELGEVIV---------SGKFTID 330
G+ P Y I G + +CE ++ + IV +GK
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEA 503
Query: 331 DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
+ GS S+D + + + + G +PT + L RN
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAF---KFGQELMDRN----------- 549
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
D YNV ++ LC G+ +EA + EM+ GL PD S YN+++ + CR+
Sbjct: 550 -----MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGE 604
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
A KL +M S NL TYN L++ G +E A L + M+ G +P + T+
Sbjct: 605 TAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRR 664
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+L+ Q L ++ +N + ++ +T + LC
Sbjct: 665 VLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 169/396 (42%), Gaps = 11/396 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LLA L+ + A + EM RGV F + + C N ++ ++ D
Sbjct: 107 NILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD---- 159
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
R + VI +I G+C+ A V D + + D + Y + F G
Sbjct: 160 RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQ 219
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
V VL ++ GV P Y FI+ + + EA +L E +V +D L+A
Sbjct: 220 VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279
Query: 337 LIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
L+ + D R A F M + G P T L +L K + EL+ + + +
Sbjct: 280 LVAGLCR-DGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSR 338
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D+ +Y ++ +L G+ E ++ L P+ Y L++A C+ + A
Sbjct: 339 GVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEA 398
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+++ +M S N+ T++ +I+ F + G ++ A M E+G+ P+ TY +L++G
Sbjct: 399 EQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDG 458
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
+ AA EV++ + V + + I+ + + L
Sbjct: 459 FFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGL 494
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/485 (21%), Positives = 205/485 (42%), Gaps = 38/485 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++ L + + + L+ + ++ + Y +I +L + N +A V E
Sbjct: 345 VTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLE 404
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI---WKF 199
++ + I P + +S++ G +D A + M RG+ + + +G I +KF
Sbjct: 405 MEE--KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462
Query: 200 --------------CENAKLGQVL--SMLDEVR---KRENSMI-----NGSVIAV----- 230
CE K+ + + S+++ +R K E +M +GS +++
Sbjct: 463 QGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522
Query: 231 -LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+I G K + AFK EL R PD + Y + ++G E + L + R
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRN 582
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRS 348
+G+ P + Y I+ + +A +L + + N L+ G +
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A N M+ G P+ T + + + + D ++++++ + D+ YN ++
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G R+A V++EM G+ PD +N+L+ C+ L A + QM S
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISP 762
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ T+N L+ VG I A + M + G+ P+ TY L G +++N A ++
Sbjct: 763 NIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY 822
Query: 529 NKSVN 533
+ V
Sbjct: 823 CEMVG 827
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 156/374 (41%), Gaps = 36/374 (9%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+A G AL + D M+ +G+ +G+ + FC ++ +LD + K
Sbjct: 173 NTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLD-MMK 231
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
N + I++ +C+ K VEEAF + + + D + + G
Sbjct: 232 EAGVDPNVATYTPFIVY-YCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRF 290
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E + ++ K+G AP Y I L R KEL
Sbjct: 291 SEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGR---GKEL------------------- 328
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
+ M+ +G V L T + L L K+ K+DE+ + + +++
Sbjct: 329 ------------LSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS 376
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
+ +Y V++ LC + + EA V+ EM+ K + P+V ++S++ + LL A +
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEY 436
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
M G + N+ TY LI F + + AL ++H+ML +GV + SL+ GL Q
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQ 496
Query: 518 ETNLQAAFEVFNKS 531
++ A +F +
Sbjct: 497 NGKIEEAMALFKDA 510
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP-DVSFYNSLMEACCREDLLRPAKKL 457
D + N +++ LC +G++ A + + G+ DV +N+L+ CR A +
Sbjct: 134 DGVTVNTLLAGLCRNGQVDAAAALAD--RGGGIHALDVIGWNTLIAGYCRVGDTPAALSV 191
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
D+M A G ++ YN L++ F G+++ A + M E GV P+ TYT + C+
Sbjct: 192 ADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCR 251
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++ AF+++ V + V+L LS + LCR
Sbjct: 252 TKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCR 286
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 119/288 (41%), Gaps = 10/288 (3%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+++ C+ + + A +L R +P +AY I+ + VL + K G
Sbjct: 79 LLYSHCRLRLLRPAIALL-----RSSRPTTVAYNIL---LAALSDHAHAPAVLAEMCKRG 130
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAI 350
V + GL ++ A L + G +D N LI + D +A+
Sbjct: 131 VPFDGVTVNTLLAGLCRNGQVDAAAALADR-GGGIHALDVIGWNTLIAGYCRVGDTPAAL 189
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ M +G + + L C+ + D V ++ ++ +Y + +
Sbjct: 190 SVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYY 249
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C + + EA+ + + M R G+ DV ++L+ CR+ A L+ +M G + N
Sbjct: 250 CRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNH 309
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
TY LI ++ G + L L M+ +GV D TYT+L++ L ++
Sbjct: 310 VTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQ 357
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
D + N+L+ + CR LLRPA L + + YNIL++ S+ L
Sbjct: 72 DPASLNALLYSHCRLRLLRPAIALLRSSRPTTVA-----YNILLAALSDHAHAPAVLA-- 124
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
M ++GV D T +LL GLC+ + AA
Sbjct: 125 -EMCKRGVPFDGVTVNTLLAGLCRNGQVDAA 154
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 198/448 (44%), Gaps = 44/448 (9%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY++++ S + QI++ + V +++ + D Y +I SL + AF V +E+
Sbjct: 133 SYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDEL 192
Query: 146 -KFNCEDIGPEICNSLLAVLAS--DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
K C+ P + + + A+ +G I+ AL++FDE+ RG+ + I C
Sbjct: 193 LKDGCK---PSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGIC-- 247
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
K G LD VR N V++ +++ F R E+ +++ ++ + C+P+
Sbjct: 248 -KEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNV 306
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ + I+ F G V E VL+ ++ G+ P + Y I E R+
Sbjct: 307 VTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRL--------- 357
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
D+ AI + M+ G +P + + + LCK +
Sbjct: 358 ----------DL---------------AIEYLEKMVSDGCLPDIVNYNTILATLCKFGCA 392
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
D ++V++ L + +YN M S L + G +A +I EM RKG+DPD YNSL
Sbjct: 393 DLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSL 452
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ CR+ L+ A L M A+ + ++NI++ + + + L M+EKG
Sbjct: 453 ISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGC 512
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFN 529
P+ T+Y L+EG+ A E+ N
Sbjct: 513 LPNETSYVLLIEGIAYAGWRAEAMELAN 540
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 159/331 (48%), Gaps = 11/331 (3%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I GF K +++ A +V D +R R PD + Y I+ G + V+ + K G
Sbjct: 137 MISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDG 196
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV--SSIDPRSA 349
P Y I I+E RI EA EL + +VS D NA+I + ++ R A
Sbjct: 197 CKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDR-A 255
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ F + +G P + + + L ++ +++ ++ + K + + ++ ++++++S
Sbjct: 256 LDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISS 315
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
C GR+REA V++ MK KGL PD Y+ L+ A C+E L A + ++M + GC +
Sbjct: 316 FCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPD 375
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN----LQAAF 525
+ YN +++ + G + AL +F + E G P Y ++ L N L+
Sbjct: 376 IVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMIS 435
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
E+ K ++ D + S++S LCR L+
Sbjct: 436 EMIRKGIDPDEITYNSLISC----LCRDGLV 462
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 143/322 (44%), Gaps = 12/322 (3%)
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV---- 292
C+ + E+ L+ + + KPD + KL+ F + K R + +
Sbjct: 73 CRAGKHNESLYFLESVVSKGFKPDVVLCT------KLIKGFFNSRNLKKAMRVMEILETY 126
Query: 293 -APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AI 350
P Y I G +I A ++ + + S F+ D N +IGS+ S A
Sbjct: 127 GDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ +++ G P++ T + L + + +E +E++ L + D+ +YN ++ +
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C G A ++ + +G +PDV YN L+ + + ++L M SGC N+
Sbjct: 247 CKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNV 306
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
T++ILIS F G + A+ + M EKG+ PD+ +Y L+ C+E L A E K
Sbjct: 307 VTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEK 366
Query: 531 SVNHDVMLARSILSTFMISLCR 552
V+ + +T + +LC+
Sbjct: 367 MVSDGCLPDIVNYNTILATLCK 388
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 202/466 (43%), Gaps = 35/466 (7%)
Query: 54 RVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVN 113
R INP ++T+ +L GFF + Q YH D + + VKVN
Sbjct: 443 RGINPNVVTYGTLIDGFFKFQGQDAALE----VYH---------------DMLCEGVKVN 483
Query: 114 KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNA 173
K +DS ++ L Q ++A ++F + + + +L+ L G + A
Sbjct: 484 KFIVDS-----LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTA 538
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR----KRENSMINGSVIA 229
K E+ R + + + VFI C K + S L E+R K + S N +++
Sbjct: 539 FKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVS 598
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
C+ +A K+L E+++ KP+ I Y + G+V + + +L +
Sbjct: 599 ------HCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRS 348
G +P + +R + RR+ ++ E +++ D V N L+ + R
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A V M+ G P T + L CK + D Y + + ++ ++N ++
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L + GR+ EA V+ EM++ GL+P+ Y+ L ++ A +L+ +M G
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVP 832
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+ TYN LIS F++ G + A LF +M ++GV P + TY L+ G
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 113/521 (21%), Positives = 203/521 (38%), Gaps = 74/521 (14%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+ Y++++ + Q++A VL +K + + + Y I + K ++AF ++
Sbjct: 205 VGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEG 264
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ N + ++L+A L DG A +F EM G + + + I + +
Sbjct: 265 MVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGR 324
Query: 205 LGQVLSMLDEVRKR----------------------------------ENSMINGSVIAV 230
++LS+L E+ R +N NG V
Sbjct: 325 GKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTV 384
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
LI CK V+EA +VL E+ + P+ + + V F G + + + ++
Sbjct: 385 LI-DALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKER 443
Query: 291 GVAPRTNDYREFILGL-----------IVERRICEAKELGEVIV---------SGKFTID 330
G+ P Y I G + +CE ++ + IV +GK
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEA 503
Query: 331 DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
+ GS S+D + + + + G +PT + L RN
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAF---KFGQELMDRN----------- 549
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
D YNV ++ LC G+ +EA + EM+ GL PD S YN+++ + CR+
Sbjct: 550 -----MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGE 604
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
A KL +M S NL TYN L++ G +E A L + M+ G +P + T+
Sbjct: 605 TAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRR 664
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+L+ Q L ++ +N + ++ +T + LC
Sbjct: 665 VLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 169/396 (42%), Gaps = 11/396 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LLA L+ + A + EM RGV F + + C N ++ ++ D
Sbjct: 107 NILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD---- 159
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
R + VI +I G+C+ A V D + + D + Y + F G
Sbjct: 160 RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQ 219
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
V VL ++ GV P Y FI+ + + EA +L E +V +D L+A
Sbjct: 220 VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279
Query: 337 LIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
L+ + D R A F M + G P T L +L K + EL+ + + +
Sbjct: 280 LVAGLCR-DGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSR 338
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D+ +Y ++ +L G+ E ++ L P+ Y L++A C+ + A
Sbjct: 339 GVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEA 398
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+++ +M S N+ T++ +I+ F + G ++ A M E+G+ P+ TY +L++G
Sbjct: 399 EQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDG 458
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
+ AA EV++ + V + + I+ + + L
Sbjct: 459 FFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGL 494
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/485 (21%), Positives = 203/485 (41%), Gaps = 38/485 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++ L + + + L+ + ++ + Y +I +L + N +A V E
Sbjct: 345 VTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLE 404
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF--- 199
++ + I P + +S++ G +D A + M RG+ + + +G I F
Sbjct: 405 MEE--KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462
Query: 200 --------------CENAKLGQVL--SMLDEVR---KRENSMI-----NGSVIAV----- 230
CE K+ + + S+++ +R K E +M +GS +++
Sbjct: 463 QGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522
Query: 231 -LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+I G K + AFK EL R PD + Y + ++G E + L + R
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRN 582
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRS 348
+G+ P + Y I+ + +A +L + + N L+ G +
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A N M+ G P+ T + + + + D ++++++ + D+ YN ++
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G R+A V++EM G+ PD +N+L+ C+ L A + QM S
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISP 762
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ T+N L+ VG I A + M + G+ P+ TY L G +++N A ++
Sbjct: 763 NIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY 822
Query: 529 NKSVN 533
+ V
Sbjct: 823 CEMVG 827
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 156/374 (41%), Gaps = 36/374 (9%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+A G AL + D M+ +G+ +G+ + FC ++ +LD + K
Sbjct: 173 NTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLD-MMK 231
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
N + I++ +C+ K VEEAF + + + D + + G
Sbjct: 232 EAGVDPNVATYTPFIVY-YCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRF 290
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E + ++ K+G AP Y I L R KEL
Sbjct: 291 SEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGR---GKEL------------------- 328
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
+ M+ +G V L T + L L K+ K+DE+ + + +++
Sbjct: 329 ------------LSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS 376
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
+ +Y V++ LC + + EA V+ EM+ K + P+V ++S++ + LL A +
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEY 436
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
M G + N+ TY LI F + + AL ++H+ML +GV + SL+ GL Q
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQ 496
Query: 518 ETNLQAAFEVFNKS 531
++ A +F +
Sbjct: 497 NGKIEEAMALFKDA 510
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP-DVSFYNSLMEACCREDLLRPAKKL 457
D + N +++ LC +G++ A + + G+ DV +N+L+ CR A +
Sbjct: 134 DGVTVNTLLAGLCRNGQVDAAAALAD--RGGGIHALDVIGWNTLIAGYCRVGDTPAALSV 191
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
D+M A G ++ YN L++ F G+++ A + M E GV P+ TYT + C+
Sbjct: 192 ADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCR 251
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++ AF+++ V + V+L LS + LCR
Sbjct: 252 TKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCR 286
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 119/288 (41%), Gaps = 10/288 (3%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+++ C+ + + A +L R +P +AY I+ + VL + K G
Sbjct: 79 LLYSHCRLRLLRPAIALL-----RSSRPTTVAYNIL---LAALSDHAHAPAVLAEMCKRG 130
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAI 350
V + GL ++ A L + G +D N LI + D +A+
Sbjct: 131 VPFDGVTVNTLLAGLCRNGQVDAAAALADR-GGGIHALDVIGWNTLIAGYCRVGDTPAAL 189
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ M +G + + L C+ + D V ++ ++ +Y + +
Sbjct: 190 SVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYY 249
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C + + EA+ + + M R G+ DV ++L+ CR+ A L+ +M G + N
Sbjct: 250 CRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNH 309
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
TY LI ++ G + L L M+ +GV D TYT+L++ L ++
Sbjct: 310 VTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQ 357
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
D + N+L+ + CR LLRPA L + + YNIL++ S+ L
Sbjct: 72 DPASLNALLYSHCRLRLLRPAIALLRSSRPTTVA-----YNILLAALSDHAHAPAVLA-- 124
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
M ++GV D T +LL GLC+ + AA + ++
Sbjct: 125 -EMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRG 161
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 203/478 (42%), Gaps = 21/478 (4%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y I++SL I +VL ++ + + I+ + +G + A +
Sbjct: 110 TYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVL 169
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ CN +++ + G +D +++ ++ G E + + + C +
Sbjct: 170 HAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRW 229
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
V ++ E+ R N + LI + C+ E+ + L ++ C PD Y
Sbjct: 230 DDVEELMVEM-VRVGCPPNVATFNTLIAY-LCRNGLFEQVHEALSQMPEHGCTPDLRMYA 287
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + G +L + G+ P Y + GL R EA++L +
Sbjct: 288 TIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQE 347
Query: 326 KFTIDDDVLNALI------GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+DD N L+ G V + I M+E G +P + T + + CK
Sbjct: 348 DCPLDDVTFNILVDFFCQNGLVDRV-----IELLEQMLEHGCIPDVITYTTVINGFCKEG 402
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
DE V + K +SA + SY +++ LC + R +A +I M ++G P+ +N
Sbjct: 403 LVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFN 462
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+L+ C++ L+ A +L QM +GCS +L +Y+ +I + G+ E AL L + M+ K
Sbjct: 463 TLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINK 522
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNK----SVNHDVMLARSILSTFMISLCRR 553
G+ P+ Y+S+ L +E ++F+ +V D L +++S SLC+R
Sbjct: 523 GITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVIS----SLCKR 576
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/455 (20%), Positives = 199/455 (43%), Gaps = 38/455 (8%)
Query: 78 PNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
P+F P +SY+++LK L ++++ + ++ ++ ++ + + + +I L +
Sbjct: 205 PSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLF 264
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
++ +++ + + +++ + DG+ + A + M G++ + + +
Sbjct: 265 EQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTV 324
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
+ C + + +L E+ + + + + V +++ FC+ V+ ++L+++
Sbjct: 325 LKGLCSAERWEEAEDLLAEMFQEDCPLDD--VTFNILVDFFCQNGLVDRVIELLEQMLEH 382
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
C PD I Y V F G V E ++LK G P T Y + GL R +A
Sbjct: 383 GCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDA 442
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+EL + MI++G +P T + L +
Sbjct: 443 QEL----------------------------------ISHMIQQGCLPNPVTFNTLINFM 468
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
CK+ ++ +E+ K + N D+ SY+ ++ L +G+ EA ++ M KG+ P+
Sbjct: 469 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNT 528
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y+S+ A RE +++D + + + YN +IS + E + A+ F
Sbjct: 529 IIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAY 588
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
M+ G P+ +TYT L+ GL E ++ A ++ ++
Sbjct: 589 MVSNGCMPNESTYTILIRGLASEGLVREAQDLLSE 623
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 155/367 (42%), Gaps = 11/367 (2%)
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
+ C + L++LDE+ R + + +I+ C+G A + L L
Sbjct: 114 IVRSLCARGLIADALTVLDEMPLRGCAAT--PPMCHVILEAACRGGGFRSAVRALQVLHA 171
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
+ C D +V G V E +L+K G P Y + GL + +R +
Sbjct: 172 KGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDD 231
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV-----FFNFMIEKGRVPTLSTLS 369
+EL +V + N LI + R+ + + M E G P L +
Sbjct: 232 VEELMVEMVRVGCPPNVATFNTLIAYLC----RNGLFEQVHEALSQMPEHGCTPDLRMYA 287
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
+ +CK + ++ + + ++ YN ++ LC++ R EA ++ EM ++
Sbjct: 288 TIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQE 347
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
D +N L++ C+ L+ +L +QM GC ++ TY +I+ F + G ++ A
Sbjct: 348 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEA 407
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
+ L NM G P+ +YT +L+GLC+ A E+ + + + +T +
Sbjct: 408 VMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINF 467
Query: 550 LCRRVLI 556
+C++ L+
Sbjct: 468 MCKKGLV 474
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/163 (18%), Positives = 68/163 (41%), Gaps = 6/163 (3%)
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
LS L ++LC ++ + + L + +YN M++ C +G++ A + +
Sbjct: 47 LSALIRSLCAAGRT---ADAARALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP 103
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
+ P+ Y ++ + C L+ A + D+M GC+ ++++ G
Sbjct: 104 ---VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
A+R + KG D+ ++ +C++ + E+ K
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRK 203
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 209/476 (43%), Gaps = 7/476 (1%)
Query: 82 HSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
H+P + ++ IL S + + + S+ ++++ I D +I F
Sbjct: 55 HTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
SV ++ N+L+ L G + AL D++ +G + + + + I
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGV 174
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECK 258
C K+G + + +RK + + V+ II CK + V EA+ + E+ ++
Sbjct: 175 C---KIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGIS 231
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
D + Y + F ++G + E +L + + P Y + L E ++ EAK +
Sbjct: 232 ADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSV 291
Query: 319 GEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
V++ D + L+ G + + A FN M G P + T + L CK
Sbjct: 292 LAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK 351
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
DE + ++K + + + +Y+ ++ LC SGR+ + +I EM+ +G DV
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVIT 411
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
Y+SL++ C+ L A L+++M N+ T+ IL+ + G ++ A +F ++L
Sbjct: 412 YSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLL 471
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
KG + TY ++ G C++ L+ A + +K ++ + T +I+L ++
Sbjct: 472 TKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKK 527
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 109/511 (21%), Positives = 221/511 (43%), Gaps = 57/511 (11%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFT---------HSP--LSYHSILKSL 94
SLS L + I P L+T + L F + F+ + P ++ ++++K L
Sbjct: 80 SLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGL 139
Query: 95 SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGP 154
L Q+ ++ L+ Y +I + + +T+ A ++
Sbjct: 140 CLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDV 199
Query: 155 EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
+ N+++ + + A +F EM+ +G+ + + I+ FC KL + + +L+E
Sbjct: 200 VMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNE 259
Query: 215 VRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIREC-KPDFIAYRIVAEEFK 272
+ + IN +V +++ CK +V+EA VL + ++ C KPD I Y + + +
Sbjct: 260 MVLKT---INPNVYTYNILVDALCKEGKVKEAKSVL-AVMLKACVKPDVITYSTLMDGYF 315
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
L+ V + + V +GV P + Y I G C+ K + E
Sbjct: 316 LVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF------CKNKMVDE------------ 357
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
A+ F M +K VP + T S+L LCK + + ++ +
Sbjct: 358 ----------------ALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMR 401
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D+ +Y+ ++ LC +G L A + +MK + + P++ + L++ C+ L+
Sbjct: 402 DRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLK 461
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A++++ + G N+ TYN++I+ + G +E AL + M + G P+A T+ +++
Sbjct: 462 DAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETII 521
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
L ++ A ++ + M+AR +L
Sbjct: 522 IALFKKDENDKAEKLLRQ------MIARGLL 546
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 99/213 (46%), Gaps = 6/213 (2%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
S+ ++D A+ FN M+ P + + + + K V + L D
Sbjct: 36 SIQNVD--DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPD 93
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ + N++++ C G++ + V+ ++ ++G PD N+L++ C + ++ A D
Sbjct: 94 LITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHD 153
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
++ A G N +Y LI+ ++G+ A++ + + PD Y ++++ +C+
Sbjct: 154 KLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQ 213
Query: 520 NLQAAFEVFN----KSVNHDVMLARSILSTFMI 548
+ A+ +F+ K ++ DV+ +++ F I
Sbjct: 214 LVSEAYGLFSEMAVKGISADVVTYNTLIYGFCI 246
>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 119/509 (23%), Positives = 224/509 (44%), Gaps = 20/509 (3%)
Query: 31 TPLLEQTLHQLG--LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
P LE L + G LR+ L+ ++ R + +L A FF WAS+QP + H +Y
Sbjct: 65 VPKLELALQESGVVLRNGLTERVLNRCGDAGIL-----AYKFFVWASKQPCYRHCYENYK 119
Query: 89 SILKSLSLSRQINAIDSVLKQVKV-NKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV-K 146
+++K LS +Q A+ ++L++++ N + + S V+ ++ + KA V +E+ K
Sbjct: 120 AMIKVLSKMKQFGAVWALLEEMRRDNSVLITSEVFVVVMRRFASSRMVNKAIEVLDEMPK 179
Query: 147 FNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ CE P+ + LL L +G + A +F++M R S F ++ +C+ K
Sbjct: 180 YGCE---PDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FSPSLKHFTCLLYGWCKEGK 235
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + +L V+ RE V+ ++ G+ ++ +AF +L E+R + C P+ +Y
Sbjct: 236 LLEAKHVL--VQMREAGFEPDIVVYNNLLSGYATAGKMGDAFDLLKEIRRKGCDPNATSY 293
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE-LGEVIV 323
I+ + + E V + + G Y + G R I + + L +I
Sbjct: 294 TILIQALCGQEKMDEAMRVFVEMERSGCDADVVTYTALVSGFCKWRMIDKGYQILQSMIQ 353
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
G L+ ++ + M + G +P LS + + + CK + +
Sbjct: 354 KGHMPNQLTYLHLMLAHEKKEELEECKELMGEMQKIGCIPDLSIYNVVIRLACKLGEVNA 413
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL--DPDVSFYNSL 441
V+ + + + ++++ +M++ G L EA +EM +GL L
Sbjct: 414 GVDAWNEMEVSGLSPGLDTFVIMINGFLGHGYLVEACQYFKEMVERGLLSSRQYGILKDL 473
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ A R + L AK LW + GC N+ ++ I I G ++ A +M++ +
Sbjct: 474 LNALLRGEKLELAKDLWSCIVTKGCELNVDSWTIWIHALFSNGHVKEACSYCLDMMDADL 533
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNK 530
P T+ L+ GL + N Q A E+ K
Sbjct: 534 MPKPETFAKLMRGLRKLYNRQFAAEITEK 562
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 167/352 (47%), Gaps = 5/352 (1%)
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ G V ++L+E+R R+NS++ S + V+++ F + V +A +VLDE+ C+PD
Sbjct: 130 QFGAVWALLEEMR-RDNSVLITSEVFVVVMRRFASSRMVNKAIEVLDEMPKYGCEPDEYV 188
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+ + + GSV E + + R + +P + + G E ++ EAK + +
Sbjct: 189 FGCLLDALCKNGSVKEAASLFEDMR-VRFSPSLKHFTCLLYGWCKEGKLLEAKHVLVQMR 247
Query: 324 SGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
F D V N L+ G ++ A + KG P ++ + L + LC + K D
Sbjct: 248 EAGFEPDIVVYNNLLSGYATAGKMGDAFDLLKEIRRKGCDPNATSYTILIQALCGQEKMD 307
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E + V+ + + D+ +Y +VS C + + Y ++Q M +KG P+ Y LM
Sbjct: 308 EAMRVFVEMERSGCDADVVTYTALVSGFCKWRMIDKGYQILQSMIQKGHMPNQLTYLHLM 367
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
A +++ L K+L +M GC +L YN++I ++GE+ + ++ M G++
Sbjct: 368 LAHEKKEELEECKELMGEMQKIGCIPDLSIYNVVIRLACKLGEVNAGVDAWNEMEVSGLS 427
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR--SILSTFMISLCR 552
P T+ ++ G L A + F + V ++ +R IL + +L R
Sbjct: 428 PGLDTFVIMINGFLGHGYLVEACQYFKEMVERGLLSSRQYGILKDLLNALLR 479
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/492 (22%), Positives = 210/492 (42%), Gaps = 85/492 (17%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL FN ++Q F+H+ +Y +IL L+ S++ AID+VL Q+ ++ ++
Sbjct: 146 ALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFLNLM 205
Query: 127 PSLIQGKNTQKAFSVFNEV------KFNCEDIGPEICNSLL------AVLASDGYIDNAL 174
+ ++ +F+ + K + + I C +LL ++ A +G ID+A
Sbjct: 206 KHFSKLSLHERVVEMFDAIXPIVREKPSLKAIS--TCLNLLVESNQSSITAKNGDIDSAF 263
Query: 175 KMFDEMSHRGVEFST-IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLII 233
++ +EM V + I + I C + +L + + + +E+ ++ + + LI
Sbjct: 264 EVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALI- 322
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
+GFC G +V+ A K+++ ++ C P +VF
Sbjct: 323 NGFCHGXKVDRALKIMEFMKKNGCNP----------------NVF--------------- 351
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFF 353
+Y + G E R+ EAKE+ F
Sbjct: 352 ----NYSALMNGFCKEGRLEEAKEV----------------------------------F 373
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
+ M G P + L C+ + DE +E+ K + N D ++NV++ LC
Sbjct: 374 DEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCRE 433
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
GR EA G+++ + +G+ + + Y ++ + CRE L+ A +L M G + T
Sbjct: 434 GRFEEAXGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATS 493
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
N L+ E G++ A+ +LE G P+ ++ L+E +C+E L AFE+ + V
Sbjct: 494 NELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDLVI 553
Query: 534 HDVMLARSILST 545
+ +L+ L+T
Sbjct: 554 QEPILSNQELTT 565
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 97/191 (50%), Gaps = 1/191 (0%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYK-VLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P L T S L LC + E +E+++ ++S + D +YN +++ C ++ A
Sbjct: 277 PNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALK 336
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+++ MK+ G +P+V Y++LM C+E L AK+++D+M + G + Y LI+ F
Sbjct: 337 IMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFC 396
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
G ++ A+ L +M E D T+ +L GLC+E + A + + V L ++
Sbjct: 397 RAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEEAXGMLERLPYEGVYLNKA 456
Query: 542 ILSTFMISLCR 552
+ SLCR
Sbjct: 457 SYRIVLNSLCR 467
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 10/218 (4%)
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRV-PTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
++N L GS + AI F M+ K ++ P T + L C K D +++ + +
Sbjct: 285 LINGLCGSGRL---KEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALKIMEFM 341
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
N ++ +Y+ +++ C GRL EA V EMK GL PD Y +L+ CR +
Sbjct: 342 KKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRV 401
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A +L M + C + T+N+++ G E A + + +GV + +Y +
Sbjct: 402 DEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEEAXGMLERLPYEGVYLNKASYRIV 461
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
L LC+E LQ A ++ +ML R +L F S
Sbjct: 462 LNSLCREGELQKATQLVG------LMLGRGVLPHFATS 493
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 164/361 (45%), Gaps = 19/361 (5%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G D AL + M+ G + + I C+ + + ++L+E+ ++ G
Sbjct: 189 GRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM------LLMGCA 242
Query: 228 IAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
V ++ G C RV EA +++D + + C P + Y F L G R+
Sbjct: 243 ADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTY-----GFLLQGLCRVRQAD 297
Query: 284 LKKKRKLGVAPRTND--YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
+ + LG P N + I G + E ++ EA EL E + D + L+ +
Sbjct: 298 -EARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356
Query: 342 SSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ SA+ M +KG P + T + + + CK D+ + + +SA +
Sbjct: 357 CKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+ YN M+ LC GR+ EA G+IQEM+ +G +PD+ YN+++ C + + A+ +++
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN 476
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
+ G N TYN +I G + A+RL M+ G + D +Y L++ +C++ N
Sbjct: 477 LLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGN 536
Query: 521 L 521
+
Sbjct: 537 V 537
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 194/434 (44%), Gaps = 9/434 (2%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
++L+ + + D+ +Y+ +I +L +A ++ NE+ + ++ +
Sbjct: 196 ALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGM 255
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
G + A ++ D M +G + +G + C + + +ML V + + N
Sbjct: 256 CGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFN 315
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+VI + G ++ EA ++ + + ++ C+PD Y I+ +G + +L
Sbjct: 316 -TVIGGCLAEG-----KLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLL 369
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
++ K G AP Y + + + L E + + T++ N +I ++
Sbjct: 370 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCK- 428
Query: 345 DPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
D R A+ M +G P + + + + +LC + +E +++ L + +
Sbjct: 429 DGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGIT 488
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN ++ L GR ++A + +EM G DV YN L++A C++ + + L ++M
Sbjct: 489 YNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMA 548
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G N +YNILIS+ + + AL L ML +G+APD TY +L+ GLC+ +
Sbjct: 549 EKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMH 608
Query: 523 AAFEVFNKSVNHDV 536
AA + K N +V
Sbjct: 609 AALNLLEKLHNENV 622
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 183/403 (45%), Gaps = 20/403 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +L+ L RQ + ++L +V + L ++V I L +GK +A ++
Sbjct: 281 MTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTV---IGGCLAEGK-LAEATELYET 336
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + L+ L G I +A+++ EM +G + + + + + FC+N
Sbjct: 337 MGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGM 396
Query: 205 LGQVLSMLDEVRKRENSM----INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
++L+E+ + ++ NG +I+ CK R++EA ++ E+R + C PD
Sbjct: 397 WDDTRALLEEMSAKGLTLNSQGYNG------MIYALCKDGRMDEAMGLIQEMRSQGCNPD 450
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+Y + + E E + + + GV Y I L+ + R +A L +
Sbjct: 451 ICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAK 510
Query: 321 VIVSGKFTIDDDVLNALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
++ ++D N LI ++ ++D ++V M EKG P + + L LCK
Sbjct: 511 EMILHGCSLDVVSYNGLIKAMCKDGNVD--RSLVLLEEMAEKGIKPNNVSYNILISELCK 568
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ + +E+ K + D+ +YN +++ LC G + A +++++ + + PD+
Sbjct: 569 ERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIIT 628
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCS-GNLKTYNILISK 479
YN L+ C+ LL A L ++ A+ C G+ + IL K
Sbjct: 629 YNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPDK 671
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
++ V LC GR EA +++ M R G PD Y +++ A C + + A L ++M
Sbjct: 177 TFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 236
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
GC+ ++ T++ ++ +G + A RL M+ KG P TY LL+GLC+
Sbjct: 237 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 296
Query: 522 QAAFEVFNKSVNHDVMLARSILS 544
A + + +V+L +++
Sbjct: 297 DEARAMLGRVPELNVVLFNTVIG 319
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 1/152 (0%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF-YNSLMEACCREDLLRPAKKLWDQ 460
SYNV++S L + +A + + M + P +F + A CR A L
Sbjct: 141 SYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRG 200
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M GC + Y +I + G + A L + ML G A D T+ ++ G+C
Sbjct: 201 MARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGR 260
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++ A + ++ + M + LCR
Sbjct: 261 VREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 292
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 189/454 (41%), Gaps = 52/454 (11%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVK-FNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMS 181
++ L + N AF + N+VK F + P + N+L+ + DG +D A +F+ M
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVKKFG---VAPSLFVYNALINSMCKDGKLDEAESLFNNMG 382
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-IIHGFCKGK 240
H+G+ + + + + I FC+ KL L L K I +V +I G CK
Sbjct: 383 HKGLFPNDVTYSILIDSFCKRGKLDVALHFLG---KMTEVGIKATVYPYSSLISGHCKLG 439
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
++ A + DE+ KP+ + Y + + G + + + G++P T +
Sbjct: 440 KLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFT 499
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK 359
I GL R+ EA +L +V ++ N LI G + A + M+EK
Sbjct: 500 ALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEK 559
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G VP T L LC + E E L + ++ ++ C GRL +A
Sbjct: 560 GLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDA 619
Query: 420 -----------------------YGVIQEMKRK------------GLDPDVSFYNSLMEA 444
YG++++ R+ GL PD Y ++++A
Sbjct: 620 LDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDA 679
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
+ L+ A LWD M + GC N+ TY LI+ ++G ++ A L ML P+
Sbjct: 680 NAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPN 739
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
TY L+ L E N++ A ++ HDV+L
Sbjct: 740 QNTYACFLDYLTSEGNIEKAIQL------HDVLL 767
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 137/553 (24%), Positives = 236/553 (42%), Gaps = 74/553 (13%)
Query: 10 ATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALG 69
A+ SQ + ++ R + W L + + +L P V +V+ L LAL
Sbjct: 24 ASPDSQFVACLTDIVRGNQSWRVALNNSF----ISQTLKPHHVEKVL-IQTLDDSRLALR 78
Query: 70 FFNWASQQPNFTHSPLSY----HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV---Y 122
FFN+ NF HS S+ H++++S +L +++ L +N L S Y
Sbjct: 79 FFNFLGLHKNFDHSTTSFCILIHALVQS-NLYWPASSLLQTLLLRGLNPEGLFESFLDSY 137
Query: 123 R-----------FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYID 171
R +I + +Q + V + +C I P+I +L VL +G I
Sbjct: 138 RKCNFSTTLGFDLLIQTYVQNRRELDGLVVV-RLMMDC-GILPQI-RTLSGVL--NGLIR 192
Query: 172 -----NALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
AL +FDE+ G+ + + CE L + + + + E+S + S
Sbjct: 193 IRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCE---LKDFIRAREVIGRMESSGCDLS 249
Query: 227 VIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
V + I G CK +RV EA ++ + ++Y+
Sbjct: 250 VATYNVFIRGLCKNQRVWEAVEI----------KNLLSYK-------------------- 279
Query: 286 KKRKLGVAPRTNDYREFILGLI-VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
G+ Y +LGL VE + + E+I G + V N + G
Sbjct: 280 -----GLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKG 334
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
+ SA N + + G P+L + L ++CK K DE ++ + F + +Y+
Sbjct: 335 NIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYS 394
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
+++ C G+L A + +M G+ V Y+SL+ C+ LR AK L+D+M A+
Sbjct: 395 ILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIAN 454
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G N+ Y LIS + + GE+ A RL+H M KG++P+ T+T+L+ GLC + A
Sbjct: 455 GLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEA 514
Query: 525 FEVFNKSVNHDVM 537
++F + V +V+
Sbjct: 515 NKLFGEMVEWNVI 527
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 200/483 (41%), Gaps = 84/483 (17%)
Query: 111 KVNKITLDSSVYRFIIPSLIQGK----NTQKAFSVFNEVKFNCEDIGPEICNSLLAVLAS 166
K+ ++ + ++VY + SLI G + A S+F+E+ N I SL++
Sbjct: 415 KMTEVGIKATVYPY--SSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCK 472
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
+G + NA +++ EM+ +G+ +T F I C ++ + + E+ E ++I
Sbjct: 473 EGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMV--EWNVIPNE 530
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
V ++I G CK AF++LDE+ + PD YR + G V E +
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590
Query: 287 KRKLGVAPRTND--YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSS 343
+ G + N+ + + G E R+ +A + ++ +D + LI G +
Sbjct: 591 LQ--GEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQ 648
Query: 344 IDPRS-----------------------------------AIVFFNFMIEKGRVPTLSTL 368
D RS A ++ M+ +G +P + T
Sbjct: 649 QDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTY 708
Query: 369 SNLSKNLCKRNKSD--ELVEVYKVLSAN------------DYFT---------------- 398
+ L LCK D EL+ ++L++N DY T
Sbjct: 709 TALINGLCKIGLMDKAELL-CREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL 767
Query: 399 -----DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ +YN+++ C GR++EA V+ M G+ PD Y++++ CR L+
Sbjct: 768 EGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKE 827
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A KLW+ M G + + YN LI GE+ A L +M+ +GV P+ TY SL+
Sbjct: 828 AIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIH 887
Query: 514 GLC 516
G C
Sbjct: 888 GTC 890
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 94/204 (46%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
+V M++ G +P + TLS + L + + + ++ + ++ D+ Y +V
Sbjct: 164 GLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVR 223
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC A VI M+ G D V+ YN + C+ + A ++ + + G
Sbjct: 224 SLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRA 283
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TY L+ +V E E + + M+E G P ++L++GL ++ N+ +AF++
Sbjct: 284 DVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLV 343
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
NK V + + + + S+C+
Sbjct: 344 NKVKKFGVAPSLFVYNALINSMCK 367
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 97/208 (46%), Gaps = 2/208 (0%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
R A+ F+ ++ G P + + + ++LC+ EV + ++ + +YNV
Sbjct: 197 RMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVF 256
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC + R+ EA + + KGL DV Y +L+ C+ + +++ ++M G
Sbjct: 257 IRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGF 316
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ + L+ + G I A L + + + GVAP Y +L+ +C++ L A
Sbjct: 317 VPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAES 376
Query: 527 VFNKSVNHDVMLARSILSTFMI-SLCRR 553
+FN ++ H + + + +I S C+R
Sbjct: 377 LFN-NMGHKGLFPNDVTYSILIDSFCKR 403
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 66/160 (41%), Gaps = 8/160 (5%)
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
F+ +++++ + R + V++ M G+ P + + ++ R R A
Sbjct: 142 FSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALH 201
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L+D++ +SG ++ Y ++ E+ + A + M G TY + GLC
Sbjct: 202 LFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLC 261
Query: 517 QETNLQAAFEVFN----KSVNHDVMLARSILSTFMISLCR 552
+ + A E+ N K + DV T ++ LC+
Sbjct: 262 KNQRVWEAVEIKNLLSYKGLRADV----GTYCTLVLGLCK 297
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G I A ++ M G+ I + I+++C L + + + + + R +N
Sbjct: 788 GRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRG---VNPDT 844
Query: 228 IAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+A +I+G C + +AF++ D++ R KP+ Y + LM SV
Sbjct: 845 VAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSV 895
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 175/374 (46%), Gaps = 3/374 (0%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L +A + + ++M GV + + I C + + +S+L ++ K
Sbjct: 92 FLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKL- 150
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+ SV +I+G C R++EA ++ +E+ R+ P+ + + I+ + G V E
Sbjct: 151 -GIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSE 209
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
V + + GV P Y + G + + +A ++ E++V + LI
Sbjct: 210 ARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILIN 269
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G S A M EK +P T + L + LC + E E++K + ++
Sbjct: 270 GYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLP 329
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
++ +Y++++ LC G L EA ++ M+ + L+PD+ YN L++ L AK+L+
Sbjct: 330 NLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELF 389
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
++FA+G +++TYNI+I + G + A +LF M + G PD+ +Y +++G Q
Sbjct: 390 SKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQN 449
Query: 519 TNLQAAFEVFNKSV 532
+ A ++ ++ V
Sbjct: 450 QDPSTAIQLIDEMV 463
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 114/225 (50%), Gaps = 1/225 (0%)
Query: 330 DDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
+D LN LI S+ + A+ + M + G P T + L LC + E VE++
Sbjct: 120 NDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELF 179
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
++ D + ++ ++V LC G + EA V + M KG++P++ YN+LM C
Sbjct: 180 NEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLR 239
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
+ A K+++ M GC+ ++ +Y+ILI+ + + I+ A L M EK + P+ TY
Sbjct: 240 LEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTY 299
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+L++GLC ++L A E+F K + ++ S + LC+
Sbjct: 300 NTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKH 344
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 159/357 (44%), Gaps = 3/357 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L +I A+ + +M G++ ++ F I C ++ + + + +E+
Sbjct: 125 NILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAG 184
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R+ +M N +V +++ CK V EA V + + + +P+ Y + + L +
Sbjct: 185 RD-AMPN-TVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEM 242
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ V + G AP + Y I G RRI EAK L + + + N L
Sbjct: 243 NDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTL 302
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ G + A F M G +P L T S L LCK +E +++ +
Sbjct: 303 MQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKL 362
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ YN+++ + +G+L A + ++ G+ P V YN +++ +E L A K
Sbjct: 363 EPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYK 422
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
L+ +M G + +YN++I F + + A++L M+ + + D++T+ LL+
Sbjct: 423 LFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 160/369 (43%), Gaps = 15/369 (4%)
Query: 82 HSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSV 141
H+ + + ++ SL I+ SVL ++ I DS + +I L ++A +
Sbjct: 119 HNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVEL 178
Query: 142 FNEVKFNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
FNE+ D P L+ VL G + A +F+ M+ +GVE + + + +
Sbjct: 179 FNEMA--GRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGY 236
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAV----LIIHGFCKGKRVEEAFKVLDELRIR 255
C L M D + E + G +V ++I+G+CK +R++EA +L ++ +
Sbjct: 237 CLR------LEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEK 290
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
E P+ + Y + + S+ E + + KK G+ P Y + GL + EA
Sbjct: 291 ELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEA 350
Query: 316 KELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+L + K D + N LI G + A F+ + G P++ T + + K
Sbjct: 351 LKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKG 410
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
L K SDE ++++ + + + D SYNV++ + A +I EM + D
Sbjct: 411 LLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSAD 470
Query: 435 VSFYNSLME 443
S + L++
Sbjct: 471 SSTFKMLLD 479
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%)
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L +QM G + N T NILI+ + I A+ + M + G+ PD+ T+T+L+ GLC
Sbjct: 108 LCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLC 167
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
E ++ A E+FN+ D M + + LC++ ++
Sbjct: 168 NEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMV 207
>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
Length = 933
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 202/466 (43%), Gaps = 35/466 (7%)
Query: 54 RVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVN 113
R INP ++T+ +L GFF + Q YH D + + VKVN
Sbjct: 443 RGINPNVVTYGTLIDGFFKFQGQDAALE----VYH---------------DMLCEGVKVN 483
Query: 114 KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNA 173
K +DS ++ L Q ++A ++F + + + +L+ L G + A
Sbjct: 484 KFIVDS-----LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTA 538
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR----KRENSMINGSVIA 229
K E+ R + + + VFI C K + S L E+R K + S N +++
Sbjct: 539 FKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVS 598
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
C+ +A K+L E+++ KP+ I Y + G+V + + +L +
Sbjct: 599 ------HCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRS 348
G +P + +R + RR+ ++ E +++ D V N L+ + R
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A V M+ G P T + L CK + D Y + + ++ ++N ++
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L + GR+ EA V+ EM++ GL+P+ Y+ L ++ A +L+ +M G
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVP 832
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+ TYN LIS F++ G + A LF +M ++GV P + TY L+ G
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 113/521 (21%), Positives = 203/521 (38%), Gaps = 74/521 (14%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+ Y++++ + Q++A VL +K + + + Y I + K ++AF ++
Sbjct: 205 VGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEG 264
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ N + ++L+A L DG A +F EM G + + + I + +
Sbjct: 265 MVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGR 324
Query: 205 LGQVLSMLDEVRKR----------------------------------ENSMINGSVIAV 230
++LS+L E+ R +N NG V
Sbjct: 325 GKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTV 384
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
LI CK V+EA +VL E+ + P+ + + V F G + + + ++
Sbjct: 385 LI-DALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKER 443
Query: 291 GVAPRTNDYREFILGL-----------IVERRICEAKELGEVIV---------SGKFTID 330
G+ P Y I G + +CE ++ + IV +GK
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEA 503
Query: 331 DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
+ GS S+D + + + + G +PT + L RN
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAF---KFGQELMDRN----------- 549
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
D YNV ++ LC G+ +EA + EM+ GL PD S YN+++ + CR+
Sbjct: 550 -----MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGE 604
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
A KL +M S NL TYN L++ G +E A L + M+ G +P + T+
Sbjct: 605 TAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRR 664
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+L+ Q L ++ +N + ++ +T + LC
Sbjct: 665 VLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/485 (21%), Positives = 203/485 (41%), Gaps = 38/485 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++ L + + + L+ + ++ + Y +I +L + N +A V E
Sbjct: 345 VTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLE 404
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF--- 199
++ + I P + +S++ G +D A + M RG+ + + +G I F
Sbjct: 405 MEE--KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462
Query: 200 --------------CENAKLGQVL--SMLDEVR---KRENSMI-----NGSVIAV----- 230
CE K+ + + S+++ +R K E +M +GS +++
Sbjct: 463 QGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522
Query: 231 -LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+I G K + AFK EL R PD + Y + ++G E + L + R
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRN 582
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRS 348
+G+ P + Y I+ + +A +L + + N L+ G +
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A N M+ G P+ T + + + + D ++++++ + D+ YN ++
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G R+A V++EM G+ PD +N+L+ C+ L A + QM S
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISP 762
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ T+N L+ VG I A + M + G+ P+ TY L G +++N A ++
Sbjct: 763 NIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY 822
Query: 529 NKSVN 533
+ V
Sbjct: 823 CEMVG 827
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 168/395 (42%), Gaps = 9/395 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LLA L+ + A + EM RGV F + + C N ++ ++ D
Sbjct: 107 NILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGG 163
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
M + +++L I GF A V D + + D + Y + F G V
Sbjct: 164 ITPWMSSAGTLSLLDIAGF---GDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQV 220
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
VL ++ GV P Y FI+ + + EA +L E +V +D L+AL
Sbjct: 221 DAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSAL 280
Query: 338 IGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
+ + D R A F M + G P T L +L K + EL+ + + +
Sbjct: 281 VAGLCR-DGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D+ +Y ++ +L G+ E ++ L P+ Y L++A C+ + A+
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE 399
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
++ +M S N+ T++ +I+ F + G ++ A M E+G+ P+ TY +L++G
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGF 459
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
+ AA EV++ + V + + I+ + + L
Sbjct: 460 FKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGL 494
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 89/433 (20%), Positives = 165/433 (38%), Gaps = 44/433 (10%)
Query: 161 LAVLASDGYIDN--ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
L++L G+ D AL + D M+ +G+ +G+ + FC ++ +LD + K
Sbjct: 174 LSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLD-MMKE 232
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
N + I++ +C+ K VEEAF + + + D + + G
Sbjct: 233 AGVDPNVATYTPFIVY-YCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFS 291
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL- 337
E + ++ K+G AP Y I L R E L +VS +D AL
Sbjct: 292 EAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALM 351
Query: 338 --IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
+G D + F + P T + L LCK + DE +V +
Sbjct: 352 DWLGKQGKTDEVKDTL--RFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKS 409
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR-------- 447
++ +++ +++ G L +A + MK +G++P+V Y +L++ +
Sbjct: 410 ISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAAL 469
Query: 448 ---EDLL------------------------RPAKKLWDQMFASGCSGNLKTYNILISKF 480
D+L A L+ SG S + Y LI
Sbjct: 470 EVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGL 529
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
+ G++ A + ++++ + PDA Y + LC + A + N + +
Sbjct: 530 FKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQ 589
Query: 541 SILSTFMISLCRR 553
S +T ++S CR+
Sbjct: 590 STYNTMIVSHCRK 602
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 37/185 (20%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR--------- 452
+YN++++ L A V+ EM ++G+ D N+L+ CR +
Sbjct: 105 AYNILLAALSDHA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRA 161
Query: 453 ------------------------PAK-KLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
PA + D+M A G ++ YN L++ F G+++
Sbjct: 162 GGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVD 221
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
A + M E GV P+ TYT + C+ ++ AF+++ V + V+L LS +
Sbjct: 222 AARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALV 281
Query: 548 ISLCR 552
LCR
Sbjct: 282 AGLCR 286
>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Brachypodium distachyon]
Length = 663
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 125/546 (22%), Positives = 234/546 (42%), Gaps = 20/546 (3%)
Query: 13 ISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFN 72
IS I+ A R+ + PL+E L +L + L P +V V+ L+ A+ F+
Sbjct: 61 ISGIILQALERSMCSE---PLVE--LERLDVE--LDPIVVNLVVRG--LSDSETAVRFYW 111
Query: 73 WASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQG 132
WA +P F HS + ++ L + + L +VK + L S+YR ++ ++
Sbjct: 112 WAESRPGFDHSQFAIAYLVSLLFMDGNFALLSEFLGRVKSQGVALHRSLYRILLSGYVRA 171
Query: 133 KNTQKAFSVFNE-VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
F+E V C + G + N + VL + D K +D +G +
Sbjct: 172 GKFDSVIETFDEMVMSGCREFGVDY-NRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPFT 230
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLD 250
+ +I C++ ++ V +L ++ K S + A + I+ CK R+ +A ++++
Sbjct: 231 YSRWISALCQSNRIELVQELLVDMDKLGCS---PDIWACNIYIYYLCKQNRLPDALQMVE 287
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
++R + PD + Y+ V E + ++ K + P I GL
Sbjct: 288 KMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNN 347
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLST 367
++ EA EL +++ + + NALI SID I+ +FM G P + T
Sbjct: 348 KVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKII--SFMRTNGCEPDIVT 405
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ L + C ++ ++ + + + D SYN ++ LC + +L +A+ + +
Sbjct: 406 YNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHM 465
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
G D N L++A C+ ++ A +L+ +M G + TY LI+ VG
Sbjct: 466 EVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYN 525
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
A LF ML + P+ Y +L LC+ + + A +F+ + +V +T +
Sbjct: 526 LAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLI 585
Query: 548 ISLCRR 553
L +R
Sbjct: 586 YWLGKR 591
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/466 (20%), Positives = 195/466 (41%), Gaps = 40/466 (8%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F +P +Y + +L S +I + +L V ++K+ ++ I K +
Sbjct: 223 GFCLTPFTYSRWISALCQSNRIELVQELL--VDMDKLGCSPDIWACNIYIYYLCKQNRLP 280
Query: 139 FSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
++ K + P++ ++++ L + A+ +++EM R ++ G I
Sbjct: 281 DALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALI 340
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
+ C+N K+ + + + + + I +I GF + +++A+K++ +R
Sbjct: 341 FGLCKNNKVDEAFELASRMLTLDIEL--SVCIYNALISGFWRAGSIDKAYKIISFMRTNG 398
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C+PD + Y I+ + +G + + E +++K GV P Y + + GL C+
Sbjct: 399 CEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGL------CKTH 452
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+L + A F + +E G + + L C
Sbjct: 453 QLDK----------------------------AFAFVSDHMEVGGFCDTVSCNILIDAFC 484
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K K +E++K + D +Y +++ L + G A + ++M +DP+V+
Sbjct: 485 KTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVN 544
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN ++ C+ + A+ ++ M S + T+N LI + AL LF +M
Sbjct: 545 LYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDM 604
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
+GV PD T+ L+ GL E A+EV+ + + ++L R +
Sbjct: 605 RTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGIILDREV 650
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 112/263 (42%), Gaps = 10/263 (3%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN- 143
++Y+ +L + + ++++++ + + D Y ++ L + KAF+ +
Sbjct: 404 VTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSD 463
Query: 144 --EVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
EV C+ + CN L+ + +AL++F EM ++G++ + +G I
Sbjct: 464 HMEVGGFCDTVS---CNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFS 520
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSV-IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ +++ N+ I+ +V + +++H CK + A + + +E PD
Sbjct: 521 VGYYNLAEELFEQML---NAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPD 577
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ + + E + K R GV P T ++ I GL+ E + A E+ E
Sbjct: 578 TVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWE 637
Query: 321 VIVSGKFTIDDDVLNALIGSVSS 343
++ +D +V LI + S
Sbjct: 638 YMMENGIILDREVSERLISVLKS 660
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 117/475 (24%), Positives = 203/475 (42%), Gaps = 52/475 (10%)
Query: 60 LLTHH---SLALGFFNWASQ-QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVN-- 113
++TH LA F++A + P F+H+ +YHSI+ LS +R + ++S+L Q+ N
Sbjct: 21 MITHQENLDLAFQIFDYAGKYHPGFSHTYDTYHSIIDKLSRARAFDGVESLLSQLSRNSS 80
Query: 114 KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK--FNCEDIGPEICNSLLAVLASDG--- 168
I V+ +I + + A F +K F+ + ++ N+LL V +
Sbjct: 81 HIKCGDDVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQP-SVKLLNTLLNVFVQNKRYH 139
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVI 228
+ + LK + GV + F + I C+ + L + DE+ MI V
Sbjct: 140 LVGSTLKNCKD--KYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTM--GMIPNLVT 195
Query: 229 AVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
I+ GF + A KV E+ + PD Y ++ + G + + V+
Sbjct: 196 YTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNME 255
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS 348
GV P Y I E++ EA+ L IDD
Sbjct: 256 YNGVEPNEVTYGVMIDAYCKEKKSGEARNL----------IDD----------------- 288
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
M++K +P+ + + LC+ K + ++K + + D + ++
Sbjct: 289 -------MLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIH 341
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
+LC G++ EA + E + +G P + YN+L+ C L A +LWD M C
Sbjct: 342 WLCKEGKVWEARKLFDEFE-QGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRP 400
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
N TYN+LI F + G ++ +R+ ML+ G P+ +TYT L+EGL QE+ ++
Sbjct: 401 NAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGL-QESGMEG 454
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 95/193 (49%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G +P + + + L K LCK+N + ++V+ + ++ +Y ++ + G L A
Sbjct: 153 GVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNA 212
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
V E+ KG PD + Y LM C++ L A K+ D M +G N TY ++I
Sbjct: 213 EKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDA 272
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ + + A L +ML+K P +T +++ LC++ ++ A ++ + + + +
Sbjct: 273 YCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPD 332
Query: 540 RSILSTFMISLCR 552
+I+ST + LC+
Sbjct: 333 NAIMSTLIHWLCK 345
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%)
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G N+ ++NILI + ++E AL++F M G+ P+ TYT++L G +L A
Sbjct: 153 GVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNA 212
Query: 525 FEVFNKSVNHDVMLARSILSTFMISLCRR 553
+VF++ + + + + M+ C++
Sbjct: 213 EKVFSEISDKGWLPDATTYTVLMVGYCKQ 241
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 164/361 (45%), Gaps = 19/361 (5%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G D AL + M+ G + + I C+ + + ++L+E+ ++ G
Sbjct: 173 GRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM------LLMGCA 226
Query: 228 IAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
V ++ G C RV EA +++D + + C P + Y F L G R+
Sbjct: 227 ADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTY-----GFLLQGLCRVRQAD 281
Query: 284 LKKKRKLGVAPRTND--YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
+ + LG P N + I G + E ++ EA EL E + D + L+ +
Sbjct: 282 -EARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 340
Query: 342 SSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ SA+ M +KG P + T + + + CK D+ + + +SA +
Sbjct: 341 CKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 400
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+ YN M+ LC GR+ EA G+IQEM+ +G +PD+ YN+++ C + + A+ +++
Sbjct: 401 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN 460
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
+ G N TYN +I G + A+RL M+ G + D +Y L++ +C++ N
Sbjct: 461 LLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGN 520
Query: 521 L 521
+
Sbjct: 521 V 521
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 194/434 (44%), Gaps = 9/434 (2%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
++L+ + + D+ +Y+ +I +L +A ++ NE+ + ++ +
Sbjct: 180 ALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGM 239
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
G + A ++ D M +G + +G + C + + +ML V + + N
Sbjct: 240 CGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFN 299
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+VI + G ++ EA ++ + + ++ C+PD Y I+ +G + +L
Sbjct: 300 -TVIGGCLAEG-----KLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLL 353
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
++ K G AP Y + + + L E + + T++ N +I ++
Sbjct: 354 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCK- 412
Query: 345 DPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
D R A+ M +G P + + + + +LC + +E +++ L + +
Sbjct: 413 DGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGIT 472
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN ++ L GR ++A + +EM G DV YN L++A C++ + + L ++M
Sbjct: 473 YNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMA 532
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G N +YNILIS+ + + AL L ML +G+APD TY +L+ GLC+ +
Sbjct: 533 EKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMH 592
Query: 523 AAFEVFNKSVNHDV 536
AA + K N +V
Sbjct: 593 AALNLLEKLHNENV 606
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 183/403 (45%), Gaps = 20/403 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +L+ L RQ + ++L +V + L ++V I L +GK +A ++
Sbjct: 265 MTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTV---IGGCLAEGK-LAEATELYET 320
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + L+ L G I +A+++ EM +G + + + + + FC+N
Sbjct: 321 MGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGM 380
Query: 205 LGQVLSMLDEVRKRENSM----INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
++L+E+ + ++ NG +I+ CK R++EA ++ E+R + C PD
Sbjct: 381 WDDTRALLEEMSAKGLTLNSQGYNG------MIYALCKDGRMDEAMGLIQEMRSQGCNPD 434
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+Y + + E E + + + GV Y I L+ + R +A L +
Sbjct: 435 ICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAK 494
Query: 321 VIVSGKFTIDDDVLNALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
++ ++D N LI ++ ++D ++V M EKG P + + L LCK
Sbjct: 495 EMILHGCSLDVVSYNGLIKAMCKDGNVD--RSLVLLEEMAEKGIKPNNVSYNILISELCK 552
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ + +E+ K + D+ +YN +++ LC G + A +++++ + + PD+
Sbjct: 553 ERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIIT 612
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCS-GNLKTYNILISK 479
YN L+ C+ LL A L ++ A+ C G+ + IL K
Sbjct: 613 YNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPDK 655
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 150/353 (42%), Gaps = 40/353 (11%)
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
C+ R +EA +L + C PD + Y+ V G V E +L + +G A
Sbjct: 169 LCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAAD 228
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVS-----GKFTI-----------DDDVLNALIG 339
N + + + G+ R+ EA L + +++ G T D A++G
Sbjct: 229 VNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLG 288
Query: 340 SVSSIDPRSAIVFFNFMIE--------------------KGRVPTLSTLSNLSKNLCKRN 379
V ++ +V FN +I KG P T S L LCK
Sbjct: 289 RVPELN----VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLG 344
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ V + + + + ++ +Y +++ C +G + +++EM KGL + YN
Sbjct: 345 RIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYN 404
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
++ A C++ + A L +M + GC+ ++ +YN +I ++E A +F N+LE+
Sbjct: 405 GMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 464
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
GV + TY +++ L ++ Q A + + + H L + + ++C+
Sbjct: 465 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCK 517
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 32/212 (15%)
Query: 351 VFFNFMIEKGRVP-TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ M+ + RVP T T ++ LC+ ++DE + + + ++ + D Y ++
Sbjct: 144 ALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHA 203
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC G + EA ++ EM G DV+ ++ ++ C +R A +L D+M GC
Sbjct: 204 LCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPG 263
Query: 470 LKTYNILISKFSEV-------------------------------GEIEGALRLFHNMLE 498
+ TY L+ V G++ A L+ M
Sbjct: 264 VMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGL 323
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
KG PDA TY+ L+ GLC+ + +A + +
Sbjct: 324 KGCQPDAHTYSILMHGLCKLGRIGSAVRLLRE 355
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
++ V LC GR EA +++ M R G PD Y +++ A C + + A L ++M
Sbjct: 161 TFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 220
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
GC+ ++ T++ ++ +G + A RL M+ KG P TY LL+GLC+
Sbjct: 221 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 280
Query: 522 QAAFEVFNKSVNHDVMLARSILS 544
A + + +V+L +++
Sbjct: 281 DEARAMLGRVPELNVVLFNTVIG 303
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 178/423 (42%), Gaps = 42/423 (9%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
V+ +I + +Q + ++ F ++ + CNSLL L +++ A ++ E+
Sbjct: 50 VFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREV 109
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
G+E + + + C++ K V S L E+ N + V +I +C+
Sbjct: 110 VRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEG--NGIYADMVTYNTLIGAYCREG 167
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+EEAF++++ + + KP Y + G + +L + +G++P T Y
Sbjct: 168 LLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYN 227
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKG 360
++ EAKE+ F M+ +G
Sbjct: 228 TLLVESCRRDNFSEAKEI----------------------------------FGEMLRQG 253
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
VP L + S+L + D+ + ++ + D Y V++ C +G + EA
Sbjct: 254 VVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEAL 313
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+ EM +G DV YN+++ C+E +L A KL+D+M G + T+ LI
Sbjct: 314 KIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGH 373
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
+ G + AL LF M ++ + PD Y +L++G C+ ++ A E++ D M++R
Sbjct: 374 CQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELW------DGMISR 427
Query: 541 SIL 543
I
Sbjct: 428 KIF 430
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 199/429 (46%), Gaps = 15/429 (3%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S +Y++I+ L + +L ++ ++ D++ Y ++ + N +A +F
Sbjct: 187 SLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIF 246
Query: 143 NEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E+ + + P++ + SL+AV + + ++D AL F +M G+ + + V + +C
Sbjct: 247 GEMLR--QGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYC 304
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRE 256
N +ML+ ++ R+ + G V+ V+ I++G CK K + +A K+ DE+ R
Sbjct: 305 RNG------NMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERG 358
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
PDF + + G++ + + + + P Y I G + +A
Sbjct: 359 ALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKAS 418
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNL 375
EL + ++S K + LI + S+ S A ++ MIEKG PTL T + + K
Sbjct: 419 ELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGY 478
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C+ S + E + A D SYN +++ + +A+ I +M+++GL PD+
Sbjct: 479 CRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDI 538
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YN +M CR+ ++ A+ + +M G + + TY LI+ + A R
Sbjct: 539 ITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDE 598
Query: 496 MLEKGVAPD 504
ML++G APD
Sbjct: 599 MLQRGFAPD 607
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 164/391 (41%), Gaps = 38/391 (9%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+LL A ++F EM +GV + F I F N L Q L +++K
Sbjct: 227 NTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKK 286
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ +VI +++HG+C+ + EA K+ DE+ + C D IAY +
Sbjct: 287 F--GLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILN-------- 336
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
GL E+ + +A +L + +V D L
Sbjct: 337 ---------------------------GLCKEKMLTDADKLFDEMVERGALPDFYTFTTL 369
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G + A+ F M ++ P + + L CK + ++ E++ + +
Sbjct: 370 IHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKI 429
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
F + +Y ++++ C+ G + EA+ + M KG+ P + N++++ CR A +
Sbjct: 430 FPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADE 489
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+M A G + + +YN LI+ F ++ A + M ++G+ PD TY ++ G C
Sbjct: 490 FLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFC 549
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
++ +Q A V K + + RS + +
Sbjct: 550 RQGRMQEAELVLRKMIEKGINPDRSTYTALI 580
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 36/283 (12%)
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTL 368
R++ E E ++ S + + + N+L+G + ID A ++ G + TL
Sbjct: 62 RKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTL 121
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY-------- 420
+ + LCK K D++ + N + DM +YN ++ C G L EA+
Sbjct: 122 NIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMAD 181
Query: 421 ---------------------------GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
G++ EM GL PD + YN+L+ CR D
Sbjct: 182 KGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSE 241
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
AK+++ +M G +L +++ LI+ FS ++ AL F +M + G+ PD YT L+
Sbjct: 242 AKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMH 301
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
G C+ N+ A ++ ++ + +L +T + LC+ ++
Sbjct: 302 GYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKML 344
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 158/360 (43%), Gaps = 15/360 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+S+ S++ S +R ++ + +K + D+ +Y ++ + N +A + +E
Sbjct: 259 VSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDE 318
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + N++L L + + +A K+FDEM RG F I C++
Sbjct: 319 MLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGN 378
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ + LS+ + +R I ++A +I GFCK +E+A ++ D + R+ P+ I
Sbjct: 379 MTKALSLFGTMTQRN---IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHIT 435
Query: 264 YRIVAEEFKLMGSVFER----EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE-L 318
Y I+ + +G V E +V+++K G+ P I G +A E L
Sbjct: 436 YGILINAYCSVGHVSEAFRLWDVMIEK----GIKPTLVTCNTVIKGYCRSGDSSKADEFL 491
Query: 319 GEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
G +I G D N LI G V + A ++ N M ++G +P + T + + C+
Sbjct: 492 GRMIAKG-VAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCR 550
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ + E V + + D +Y +++ T L EA+ EM ++G PD F
Sbjct: 551 QGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDVF 610
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 88/183 (48%)
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L + + K E E +++L + Y + + N ++ L + A+ V +E+ R G
Sbjct: 54 LIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSG 113
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
++ +V N ++ A C++ K +M +G ++ TYN LI + G +E A
Sbjct: 114 IELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAF 173
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
+ ++M +KG+ P TY +++ GLC++ A + + +N + + +T ++
Sbjct: 174 EIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVES 233
Query: 551 CRR 553
CRR
Sbjct: 234 CRR 236
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 85/198 (42%), Gaps = 17/198 (8%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
MI + V + + L ++C ++ LV +++++ + +
Sbjct: 21 MIRRSGVSRVEVVEALVSSMCGNCGTNNLV-----------------FDLLIRTYVQARK 63
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
LRE + ++ KG ++ NSL+ + D + A ++ ++ SG N+ T NI
Sbjct: 64 LREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNI 123
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
+++ + G+ + M G+ D TY +L+ C+E L+ AFE+ N +
Sbjct: 124 MVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKG 183
Query: 536 VMLARSILSTFMISLCRR 553
+ + + + LC++
Sbjct: 184 LKPSLFTYNAIINGLCKK 201
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 200/461 (43%), Gaps = 16/461 (3%)
Query: 79 NFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
F SP ++Y+++L + + ++L ++K + I Y ++ + + +
Sbjct: 236 GFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIK 295
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG------VEFSTI 190
+A V + + N L L G +D A ++ DEM G V ++T+
Sbjct: 296 QATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTL 355
Query: 191 GFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD 250
F W+ +A L +L+E+R + + V +++ CK ++EEA L+
Sbjct: 356 VDACFKWRCSSDA-----LRLLEEMRDK--GVKPTLVTHNIVVKSLCKEGKLEEALGKLE 408
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
++ PD I Y + + + G+V + ++ + G+ T + L +
Sbjct: 409 KIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMK 468
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
R +A+EL F D+ ++ + +P A+ ++ MIE+ +P++ST +
Sbjct: 469 RYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYN 528
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
L K LC+ + E ++ D +YN+++ C G L A+ +M
Sbjct: 529 TLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVEN 588
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
PDV N+LM C L A KL++ G ++ TYN LI +VG+++ A
Sbjct: 589 SFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTA 648
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
L F +M KG+ PDA TY +L L + + A + +K
Sbjct: 649 LHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHK 689
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 167/395 (42%), Gaps = 35/395 (8%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L++ A G+I A K+ + M+ G E + V C+ K+ + + DE+ +
Sbjct: 282 NTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMER 341
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ + L+ F K + +A ++L+E+R + KP + + IV + G +
Sbjct: 342 LGTALPDVVTYNTLVDACF-KWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKL 400
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E L+K + G+AP Y I C+A V+ FT+ D+
Sbjct: 401 EEALGKLEKIAEEGLAPDVITYNTLI------DAYCKAGN-----VAKAFTLMDE----- 444
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
M+ KG TL+ + NLCK + ++ E+ +
Sbjct: 445 ------------------MVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFV 486
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D SY +++ A + +M + L P +S YN+L++ CR + L+ A
Sbjct: 487 PDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDK 546
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
++ G + TYNI+I + + G++E A R + M+E PD T +L+ GLC
Sbjct: 547 LNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCL 606
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L A ++F V + +T + S+C+
Sbjct: 607 HGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCK 641
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 179/421 (42%), Gaps = 12/421 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y++++ + + I V++ + D Y + L Q +AF + +E+
Sbjct: 280 TYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEM 339
Query: 146 KFNCEDIG---PEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E +G P++ N+L+ +AL++ +EM +GV+ + + + + C
Sbjct: 340 ----ERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLC 395
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ KL + L L+++ E + + +I +CK V +AF ++DE+ + K D
Sbjct: 396 KEGKLEEALGKLEKIA--EEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMD 453
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
V M + E +L + G P Y + E A L +
Sbjct: 454 TFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWD 513
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
++ K N LI + ++ + AI N +EKG VP +T + + CK
Sbjct: 514 QMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEG 573
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ + + N + D+ + N +++ LC G+L +A + + KG DV YN
Sbjct: 574 DLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYN 633
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+L+++ C+ + A +D M G + TYN+++S SE G E A + H + +
Sbjct: 634 TLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADS 693
Query: 500 G 500
G
Sbjct: 694 G 694
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 160/363 (44%), Gaps = 4/363 (1%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
F + + C L L+ L ++ + +V +++ C+ + EA +L
Sbjct: 211 FNLLVHTHCSKGTLADALATLSTMQGF--GLSPDAVTYNTLLNAHCRKGMLGEARALLAR 268
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
++ P Y + F +G + + V++ G P Y +GL +
Sbjct: 269 MKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGK 328
Query: 312 ICEAKELGEVIVSGKFTIDDDV-LNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLS 369
+ EA L + + + D V N L+ + S A+ M +KG PTL T +
Sbjct: 329 VDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHN 388
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
+ K+LCK K +E + + ++ D+ +YN ++ C +G + +A+ ++ EM K
Sbjct: 389 IVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGK 448
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
GL D N+++ C+ A++L G + +Y +++ + + E A
Sbjct: 449 GLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPA 508
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
LRL+ M+E+ + P +TY +L++GLC+ L+ A + N+ V ++ + + + +
Sbjct: 509 LRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHA 568
Query: 550 LCR 552
C+
Sbjct: 569 YCK 571
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 68/126 (53%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
++N++V C+ G L +A + M+ GL PD YN+L+ A CR+ +L A+ L +M
Sbjct: 210 TFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 269
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G + TYN L+S F+ +G I+ A ++ +M G PD TY L GLCQ +
Sbjct: 270 KRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKV 329
Query: 522 QAAFEV 527
AF +
Sbjct: 330 DEAFRL 335
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 6/205 (2%)
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
VL+AL S S++ P++++ F +IE P T + L C + + + +
Sbjct: 177 VLSALSRSPSTL-PQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQ 235
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D +YN +++ C G L EA ++ MKR G+ P YN+L+ A R ++
Sbjct: 236 GFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIK 295
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA-PDATTYTSL 511
A K+ + M A G +L+TYN+L + G+++ A RL M G A PD TY +L
Sbjct: 296 QATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTL 355
Query: 512 LEGL----CQETNLQAAFEVFNKSV 532
++ C L+ E+ +K V
Sbjct: 356 VDACFKWRCSSDALRLLEEMRDKGV 380
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 162/399 (40%), Gaps = 43/399 (10%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++++ ++KSL ++ L+++ + D Y +I + + N KAF++ +E
Sbjct: 385 VTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDE 444
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + N++L L ++A ++ RG + +G + + +
Sbjct: 445 MVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYN 504
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + D++ +R+ +I +I G C+ +R++EA L+E + PD Y
Sbjct: 505 PEPALRLWDQMIERK--LIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTY 562
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
I+ + G + K + P + GL + ++ +A +L E V
Sbjct: 563 NIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVE 622
Query: 325 GKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVP-------TLSTLSNLSKN-- 374
+D N LI S+ + D +A+ FF+ M KG P LS LS ++
Sbjct: 623 KGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEE 682
Query: 375 ---------------------LCKRNKSDEL--------VEVYKVLSANDYFTDMESYNV 405
L K + +DE E A D +E+Y
Sbjct: 683 AHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQD--NALETYME 740
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
++ LCT G+L+EA V+ EM +KG+ D S Y +LME
Sbjct: 741 RLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEG 779
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 181/387 (46%), Gaps = 8/387 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L A+ + D M +G + + +GV + C+ ++L+++
Sbjct: 190 NTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME- 248
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + G +I II G CK K +++A + E+ + +P+ + Y + G
Sbjct: 249 -QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--N 335
+ +L + + P + I + E ++ EA++L + +V K +ID ++ +
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV--KRSIDPSIVTYS 365
Query: 336 ALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+LI D A F FM+ K P + T + L K CK + +E +EV++ +S
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ +YN+++ L +G A + +EM G+ P++ YN+L++ C+ L A
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+++ + S + TYNI+I + G++E LF N+ KGV PD Y +++ G
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARS 541
C++ + + A +F K + D L S
Sbjct: 546 FCRKGSKEEADALF-KEMKEDGTLPNS 571
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 198/451 (43%), Gaps = 10/451 (2%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN +++++++ L L + + +++ ++ D Y ++ L + +T
Sbjct: 183 QPN----TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
AF++ N+++ + G I N+++ L ++D+AL +F EM +G+ + + + I
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIR 255
C + +L ++ +R+ IN V +I F K ++ EA K+ DE+ R
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERK---INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
P + Y + F + + E + + + P Y I G +R+ E
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 316 KELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
E+ + + N LI G + D A F M+ G P + T + L
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK K ++ + V++ L + + +YN+M+ +C +G++ + + + + KG+ PD
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V YN+++ CR+ A L+ +M G N YN LI G+ E + L
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
M G A DA+T L+ + + L +F
Sbjct: 596 EMRSCGFAGDAST-IGLVTNMLHDGRLDKSF 625
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 178/396 (44%), Gaps = 7/396 (1%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK-- 217
LL+ +A D + + ++M + G+ + + + I FC ++L L++L ++ K
Sbjct: 87 LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 146
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E +++ S + ++G+C KR+ EA ++D++ + +P+ + + + L
Sbjct: 147 YEPNIVTLSSL----LNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E ++ + G P Y + GL A L + GK + N +
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 338 IGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I + A+ F M KG P + T S+L LC + + + +
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ +++ ++ G+L EA + EM ++ +DP + Y+SL+ C D L AK+
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+++ M + C ++ TYN LI F + +E + +F M ++G+ + TY L++GL
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
Q + A E+F + V+ V +T + LC+
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%)
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+L +A + EM + P + ++ L+ A + + L +QM G N TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
ILI+ F ++ AL + M++ G P+ T +SLL G C + A + ++
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/446 (21%), Positives = 202/446 (45%), Gaps = 38/446 (8%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLI-----------QGKNTQKAFSVFNEVKFNCEDIG 153
+ + QV VNK+ D+ + +I + + ++ A + + +NC
Sbjct: 80 NTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCP--- 136
Query: 154 PEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM 211
P + N ++ L +G +D A +F EM +G + + + I C+ + + ++
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAV 196
Query: 212 LDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
L ++ F KG+ +EEA ++L ++ +PD + Y ++ + +
Sbjct: 197 LQQM--------------------FDKGQ-LEEAVRLLKKMSGGGLQPDVVTYSLLIDYY 235
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
+G E + + G P YR + G + + + +L +++ ++D
Sbjct: 236 CKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLED 295
Query: 332 DVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
V N LI + + + A+ F M +KG P + T + + LCK + ++ V +
Sbjct: 296 HVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQ 355
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ + D+ ++ ++ LCT G ++ + EM +G+ P+ F N++M++ C+E
Sbjct: 356 MVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGR 415
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ A +DQ+ G ++ +Y ILI + G+++ +++L M+ G+ PD TY++
Sbjct: 416 VLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSA 475
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDV 536
LL G C+ + A ++ + + DV
Sbjct: 476 LLNGYCKNGRVDDALALYREMFSKDV 501
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 196/438 (44%), Gaps = 23/438 (5%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++L + + + +L + + I L+ V+ +I + + + KA + F E+
Sbjct: 262 TYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEM 321
Query: 146 KFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ + P + +++ +L G +++A+ F +M G+ I F I C
Sbjct: 322 R--QKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLC--- 376
Query: 204 KLGQVLSMLDEVRKRENSMIN-----GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
+ +V K MIN ++ I+ CK RV EA D++ K
Sbjct: 377 ----TIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVK 432
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA--- 315
PD ++Y I+ + + L G + E +L + +G+ P Y + G R+ +A
Sbjct: 433 PDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALAL 492
Query: 316 -KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+E+ V + +L+ L + + R F+ +++ G ++T + +
Sbjct: 493 YREMFSKDVKPNAITYNIILHGLFHAGRVVAARE---FYMKIVDSGIQLGINTYNIVLGG 549
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LC+ + DE + +++ L + ++ ++ ++N+M+ L GR+ +A + + GL PD
Sbjct: 550 LCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPD 609
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
Y ++++ E LL + +L+ M +GC+ N +T N ++ K E G++ A
Sbjct: 610 AIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLT 669
Query: 495 NMLEKGVAPDATTYTSLL 512
+ EK + +A+T L+
Sbjct: 670 KIDEKEYSVEASTAVLLI 687
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/499 (20%), Positives = 208/499 (41%), Gaps = 41/499 (8%)
Query: 53 ARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKV 112
V Y L H L GF PN ++Y+S++ L ++ ++ ++VL+Q+
Sbjct: 153 GEVDKAYTLFHEMLGQGF------PPNI----VTYNSVIDGLCKAQAMDKAEAVLQQM-F 201
Query: 113 NKITLDSSV-----------------YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
+K L+ +V Y +I + +A ++F+ + ++
Sbjct: 202 DKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAY 261
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+LL A+ G + + + M G+ F + I + +N L + ++ E+
Sbjct: 262 TYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEM 321
Query: 216 RKR---ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
R++ N + +VI +L CK RVE+A ++ PD I + +
Sbjct: 322 RQKGFSPNVVTYTTVIDIL-----CKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLC 376
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
+G + E + + G+ P + L E R+ EA + + I+ + D
Sbjct: 377 TIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQII--HVGVKPD 434
Query: 333 VLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
V++ I G +I M+ G P T S L CK + D+ + +Y+
Sbjct: 435 VVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYR 494
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+ + D + +YN+++ L +GR+ A ++ G+ ++ YN ++ C
Sbjct: 495 EMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENS 554
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
+ A +++ + + ++T+NI+I +VG I A LF +L G+ PDA Y
Sbjct: 555 FVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYG 614
Query: 510 SLLEGLCQETNLQAAFEVF 528
+++ +E L+ + E+F
Sbjct: 615 LMIQSHIEEGLLEESDELF 633
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 209/489 (42%), Gaps = 36/489 (7%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINA 102
L +++PS V+ + + L H AL F W SQ PNF H+ SY S+L + + ++
Sbjct: 62 LLPAITPSHVSSLFSLNLDPH--TALQFSYWISQTPNFKHNVDSYASLLTLIDHHKIVSD 119
Query: 103 IDSVL-KQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLL 161
+ ++ +K D+ I + + T+ + +NE LL
Sbjct: 120 VPKIIVSMIKCCYSAPDALFVSDICRKMSKDDITKLSLKCYNE---------------LL 164
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
+LA G +D +++ EM V F + I +C K+G V E ++
Sbjct: 165 TLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYC---KMGFV----KEAKQFMCK 217
Query: 222 MINGSV-----IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
MI + + I G+C+ K V+ AF+V +E+ R + ++Y + G
Sbjct: 218 MIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGR 273
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ E + + + P Y I GL + + +A L + ++ D N+
Sbjct: 274 IDEAVSLFVRMKDDCCYPNVYTYTALIKGL-CRKNVHKAMGLLDEMLERNLVPDLITYNS 332
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G + SA + M E+G VP T LCK N+ +E ++ L+
Sbjct: 333 LIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEG 392
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
++ Y+V++ C G++ EA + ++M K P+ +N+L+ C L+ A
Sbjct: 393 VSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEAL 452
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L+DQM G + T+NILI + + G+ + A + M+ G P A TY + +E
Sbjct: 453 SLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVY 512
Query: 516 CQETNLQAA 524
C +Q A
Sbjct: 513 CSAGKVQEA 521
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 145/293 (49%), Gaps = 7/293 (2%)
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D + ++ + MG V E + + K + G++P FILG + + A +
Sbjct: 191 DIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVF 250
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
E + + + +++ L ID A+ F M + P + T + L K LC++N
Sbjct: 251 EEMPNRNEVSYNQLIHGLC-EAGRID--EAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN 307
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ + ++L N D+ +YN +++ C +G L AY ++ MK +GL PD Y
Sbjct: 308 VHKAMGLLDEMLERN-LVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYG 366
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
++ C+ + + A++L+D + G S N+ Y++LI + +VG+++ A LF ML K
Sbjct: 367 CFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSK 426
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+P+A T+ +L+ GLC NL+ A +F++ V M + + TF I + R
Sbjct: 427 NCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVK---MGLKPTVYTFNILIGR 476
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 114/528 (21%), Positives = 208/528 (39%), Gaps = 62/528 (11%)
Query: 51 LVARVINPYLLTHHSLALGF---------FNWASQQPNFTHSPLSYHSILKSLSLSRQIN 101
++ ++P T S LG+ F + PN + +SY+ ++ L + +I+
Sbjct: 218 MIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPN--RNEVSYNQLIHGLCEAGRID 275
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NS 159
S+ ++K + + Y +I L + KN KA + +E+ ++ P++ NS
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLE--RNLVPDLITYNS 332
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+A G++D+A ++ M RG+ +G FI C++ ++ + + D + + E
Sbjct: 333 LIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTE-E 391
Query: 220 NSMINGSVIAVLI----------------------------------IHGFCKGKRVEEA 245
N + +VLI IHG C ++EA
Sbjct: 392 GVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEA 451
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
+ D++ KP + I+ G + L+K G P Y FI
Sbjct: 452 LSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEV 511
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPT 364
++ EA+++ + DD +LI + + SA M + P+
Sbjct: 512 YCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPS 571
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV--MVSFLCTSGRLREAYGV 422
T +L K L + E V S ++ F D+ N+ M+ F +
Sbjct: 572 HHTFLSLIKQLFDKRYVVEKSGETGVESVSN-FGDVPGSNMWKMMEF-------DIVIEL 623
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+EM++ G PD Y L+ C+ + L A KL DQM G S + +N +IS +
Sbjct: 624 FEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCK 683
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ + A + +M+ G +P +L+ GL +E + VF K
Sbjct: 684 LQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKK 731
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/375 (19%), Positives = 154/375 (41%), Gaps = 31/375 (8%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEIC--NSLLAVLASDGYIDNAL 174
++ + +I L N ++A S+F++ VK + P + N L+ + G D+A
Sbjct: 431 NAYTFNALIHGLCSAGNLKEALSLFDQMVKMG---LKPTVYTFNILIGRMLKQGDFDDAH 487
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIH 234
K +M G + + FI +C K+ + M+ V+ +E + +I
Sbjct: 488 KCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMM--VQMKEEGVPPDDFTYTSLIK 545
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV-- 292
+ K AF VL + +C+P + L+ +F++ V++K + GV
Sbjct: 546 AYGKLGLTYSAFDVLKSMFDADCEPSHHTF------LSLIKQLFDKRYVVEKSGETGVES 599
Query: 293 ------APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP 346
P +N ++ +++E L E + T D LI + ++
Sbjct: 600 VSNFGDVPGSNMWKMMEFDIVIE--------LFEEMEKHGCTPDSKCYEKLISGICKVEN 651
Query: 347 RS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
A+ + M ++G P+ + + CK K E + + + + + +E
Sbjct: 652 LGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKT 711
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++ L G V ++++ G + D + L++ ++ L+ +L+++M +G
Sbjct: 712 LICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNG 771
Query: 466 CSGNLKTYNILISKF 480
C+ + +TY+IL K
Sbjct: 772 CNFSPRTYSILTQKL 786
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/358 (19%), Positives = 135/358 (37%), Gaps = 7/358 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L S G + AL +FD+M G++ + F + I + + L ++
Sbjct: 436 NALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMS 495
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + A I +C +V+EA ++ +++ PD Y + + + +G
Sbjct: 496 SGEKPVARTYNA--FIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLT 553
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ VLK P + + I L +R + E GE V D V +
Sbjct: 554 YSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKS--GETGVESVSNFGD-VPGSN 610
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
+ + D I F M + G P L +CK +++ +
Sbjct: 611 MWKMMEFD--IVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGIS 668
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
+N ++S C + EA ++++M G P + +L+ E +
Sbjct: 669 PSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSV 728
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ ++ G + + + ILI + G +E +LF M + G TY+ L + L
Sbjct: 729 FKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 207/460 (45%), Gaps = 11/460 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y +++ L SR+ N ++L ++ ++ + VY +I ++ N +AF + E
Sbjct: 315 FTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKE 374
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ ++L+ L G +D A + +M TI + + I +
Sbjct: 375 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHS 434
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+L E+ EN+ I+ +V ++IHG C+ E+A +L+E+ + KP+
Sbjct: 435 KKDAFRLLSEM---ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFV 491
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + G+V + K K+ V P Y I GL R+ E+ + +
Sbjct: 492 YAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQ 551
Query: 324 SGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
++ + LI G + + D SA M++ G P +L ++ K + +
Sbjct: 552 ERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIE 611
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
++ +K + D Y +++ L +SG + A+ V+ +++ G PDV Y+SL+
Sbjct: 612 KVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLI 671
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
C+ A + D+M G N+ YN LI + G+I A +F+++L KG+
Sbjct: 672 SGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLV 731
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
P+ TYTSL++G C+ ++ AF ++N+ MLA I
Sbjct: 732 PNCVTYTSLIDGSCKVGDISNAFYLYNE------MLATGI 765
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/459 (21%), Positives = 204/459 (44%), Gaps = 12/459 (2%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
A QPN ++Y ++++ L Q++ +LKQ+ + D+ Y II +
Sbjct: 378 AGVQPN----KITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHH 433
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIG 191
+ + AF + +E++ I P + + + L G + A + +EM+ +G++ +
Sbjct: 434 SKKDAFRLLSEMEN--AGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFV 491
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ I +C + + D++ K +++ +I G K RVEE+ K +
Sbjct: 492 YAPLISGYCREGNVSLACEIFDKMTKV--NVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 549
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
++ R P+ Y + + G + E ++++ G+ P Y + +
Sbjct: 550 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 609
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK-GRVPTLSTLSN 370
I + + ++ +D+ + LI ++SS A IEK G VP + S+
Sbjct: 610 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 669
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LCK ++ + +S ++ YN ++ LC SG + A V + KG
Sbjct: 670 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 729
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L P+ Y SL++ C+ + A L+++M A+G + + Y++L + S G++E A+
Sbjct: 730 LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM 789
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
L M +G A +++ +L++G C+ +Q ++ +
Sbjct: 790 FLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLH 827
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 164/381 (43%), Gaps = 3/381 (0%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D A K+ EM RG +T+ + V I C + + + ++ + ++
Sbjct: 261 DTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME--DYGLVPDGFTYG 318
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I+G CK +R EA +LDE+ E KP+ + Y + + F G+ E ++K+
Sbjct: 319 ALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAA 378
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
GV P Y + GL ++ A L + +V D N +I G + A
Sbjct: 379 GVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDA 438
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ M G P + T S + LC+ + ++ ++ + ++ + Y ++S
Sbjct: 439 FRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISG 498
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
C G + A + +M + + PD+ YNSL+ + + + K + QM G N
Sbjct: 499 YCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPN 558
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
TY+ LI + + G++E A +L ML+ G+ P+ Y LLE + +++ F
Sbjct: 559 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFK 618
Query: 530 KSVNHDVMLARSILSTFMISL 550
++ VML I + +L
Sbjct: 619 SMLDQGVMLDNRIYGILIHNL 639
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 130/557 (23%), Positives = 230/557 (41%), Gaps = 70/557 (12%)
Query: 6 ATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSL---SPSLVARVINPYLLT 62
++DL +R+S A IS+ R+ LH L D SP L P
Sbjct: 72 SSDLPSRLSPAAISSL-----VRRRPSPSSPRLHPKLLLDFFYWSSPQLAPSAPAPDAFA 126
Query: 63 HHSLAL---GFFNWAS-----QQPNFTHSPLSYHSILKSLSLS--RQINAIDSVLKQVKV 112
H +++L FN A+ + P+ SI ++LS S R +D ++ K
Sbjct: 127 HLAMSLCAGSLFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKK 186
Query: 113 NKITLDSSVY------RFIIPS------LIQGKNTQKAFSVFNEVK--FNCEDIGPEI-- 156
+ D++ R + PS L++ A ++ +V+ I P++
Sbjct: 187 SGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYT 246
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
++L+ D A K+ EM RG +T+ + V I C + + + ++
Sbjct: 247 YSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM- 305
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+ ++ +I+G CK +R EA +LDE+ E KP+ + Y + + F G+
Sbjct: 306 -EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGN 364
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
E ++K+ GV P Y + GL ++ A L + +V D N
Sbjct: 365 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 424
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+I F +K LS + N +S N Y
Sbjct: 425 IIEG-----------HFRHHSKKDAFRLLSEMENAG------------------ISPNVY 455
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+Y++M+ LC SG +A +++EM KGL P+ Y L+ CRE + A +
Sbjct: 456 -----TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACE 510
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
++D+M +L YN LI S+VG +E + + F M E+G+ P+ TY+ L+ G
Sbjct: 511 IFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 570
Query: 517 QETNLQAAFEVFNKSVN 533
+ +L++A ++ + ++
Sbjct: 571 KNGDLESAEQLVQRMLD 587
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 134/306 (43%), Gaps = 34/306 (11%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I +CK + + A KVL E+R R C + + Y ++ G+V E K G
Sbjct: 250 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 309
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
+ P Y I GL RR EAK AL+ +S + + +V
Sbjct: 310 LVPDGFTYGALINGLCKSRRSNEAK-------------------ALLDEMSCAELKPNVV 350
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
+ +NL + +DE ++ K + A + +Y+ +V LC
Sbjct: 351 VY---------------ANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLC 395
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
G++ A ++++M R PD YN ++E R + A +L +M +G S N+
Sbjct: 396 KMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVY 455
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
TY+I+I + GE E A L M KG+ P+A Y L+ G C+E N+ A E+F+K
Sbjct: 456 TYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 515
Query: 532 VNHDVM 537
+V+
Sbjct: 516 TKVNVL 521
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 154/367 (41%), Gaps = 24/367 (6%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y +L+S S I + S K + + LD+ +Y +I +L N + AF V + ++
Sbjct: 597 YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIE 656
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
N + +SL++ L + A + DEMS +GV+ + + + I C++ +
Sbjct: 657 KNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDIS 716
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
++ + + + ++ V +I G CK + AF + +E+ PD Y +
Sbjct: 717 YARNVFNSILAK--GLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSV 774
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV--- 323
+ G + E+ + L ++ L + + + G ++ E +L VI+
Sbjct: 775 LTTGCSSAGDL-EQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRG 833
Query: 324 -----------------SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
+GK + + L S R F MI +G++P L
Sbjct: 834 LVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-LD 892
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
+ ++ ++ CK D+ + + V+ A SY +V LC G+L EA +++EM
Sbjct: 893 VVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEM 952
Query: 427 KRKGLDP 433
++G+ P
Sbjct: 953 DKRGICP 959
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 147/388 (37%), Gaps = 30/388 (7%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
I+ F M +GV +G+ I + + +L + K NGSV
Sbjct: 610 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEK------NGSVPD 663
Query: 230 VLI----IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
V + I G CK E+AF +LDE+ + P+ + Y + + G + V
Sbjct: 664 VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFN 723
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSI 344
G+ P Y I G I A L +++ T D V + L G S+
Sbjct: 724 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 783
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
D A+ M +G ++S+ +NL CKR K E +++ V+ + +
Sbjct: 784 DLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIE 842
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL------------------MEACC 446
++S L +G+L E + + E+++K + ++SL + C
Sbjct: 843 NIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHC 902
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+E L A L D + A +Y ++ G++ AL L M ++G+ P
Sbjct: 903 KEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSEN 962
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNH 534
LL L +Q V + + H
Sbjct: 963 QCLILLTNLHTSGYIQEHNTVLDNMLCH 990
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 134/329 (40%), Gaps = 13/329 (3%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPD------FIAYRIVAEEFKLMGSVFEREVVL 284
+++ + K RV++A +V+ +R R P + + A+ L+ V RE ++
Sbjct: 179 VLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKV--REFMV 236
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSS 343
G++P Y I R AK++ + ++ N LI G S
Sbjct: 237 GA----GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRS 292
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
A F M + G VP T L LCK +S+E + +S + ++ Y
Sbjct: 293 GAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVY 352
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
++ G EA+ +I+EM G+ P+ Y++L+ C+ + A L QM
Sbjct: 353 ANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVR 412
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
+ TYN++I + A RL M G++P+ TY+ ++ GLCQ +
Sbjct: 413 DSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEK 472
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCR 552
A ++ + + + + + CR
Sbjct: 473 ASDLLEEMTTKGLKPNAFVYAPLISGYCR 501
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 175/409 (42%), Gaps = 37/409 (9%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L++ A G+I A K+ + M+ G E + V C+ K+ + + DE+ +
Sbjct: 282 NTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMER 341
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ + L+ F K + +A ++L+E+R + KP + + IV + G +
Sbjct: 342 LSTALPDVVTYNTLVDACF-KWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKL 400
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E L+K + G+AP Y I + +A L + +V +D LN +
Sbjct: 401 EEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTV 460
Query: 338 I-------------------------------GSVSSI-----DPRSAIVFFNFMIEKGR 361
+ G+V + +P A+ ++ MIE+
Sbjct: 461 LYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKL 520
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
+P++ST + L K LC+ + E ++ L D +YN+++ C G L A+
Sbjct: 521 IPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFR 580
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+M PDV N+LM C L A KL++ G ++ TYN LI
Sbjct: 581 FHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMC 640
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+VG+++ AL F +M KG+ PDA TY +L L + + A + +K
Sbjct: 641 KVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHK 689
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/514 (20%), Positives = 203/514 (39%), Gaps = 56/514 (10%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y++++ + + I V++ + D Y + L Q +AF + +E+
Sbjct: 280 TYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEM 339
Query: 146 KFNCEDIGPEICNSLLAVLASDGYID---------NALKMFDEMSHRGVEFSTIGFGVFI 196
+ + +L V+ + +D +AL++ +EM +GV+ + + + +
Sbjct: 340 E--------RLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVV 391
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C+ KL + L L+++ E + + +I +CK V +AF ++DE+ +
Sbjct: 392 KSLCKEGKLEEALGKLEKIA--EEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG 449
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
K D V M + E +L + G P Y + E A
Sbjct: 450 LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPAL 509
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
L + ++ K N LI + ++ + AI N ++EKG VP +T + +
Sbjct: 510 RLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAY 569
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
CK + + + N + D+ + N +++ LC G+L +A + + KG DV
Sbjct: 570 CKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDV 629
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YN+L+++ C+ + A +D M G + TYN+++S SE G E A + H
Sbjct: 630 ITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHK 689
Query: 496 MLEKGV-------------------------APDA-----------TTYTSLLEGLCQET 519
+ + G P+A TY L GLC
Sbjct: 690 LADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGG 749
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
L+ A V ++ + + + S T M L +R
Sbjct: 750 QLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKR 783
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 160/363 (44%), Gaps = 4/363 (1%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
F + + C L L+ L ++ + +V +++ C+ + EA +L
Sbjct: 211 FNLLVHTHCSKGTLADALATLSTMQGF--GLSPDAVTYNTLLNAHCRKGMLGEARALLAR 268
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
++ P Y + F +G + + V++ G P Y +GL +
Sbjct: 269 MKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGK 328
Query: 312 ICEAKELGEVIVSGKFTIDDDV-LNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLS 369
+ EA L + + + D V N L+ + S A+ M +KG PTL T +
Sbjct: 329 VDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHN 388
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
+ K+LCK K +E + + ++ D+ +YN ++ C +G + +A+ ++ EM K
Sbjct: 389 IVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGK 448
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
GL D N+++ C+ A++L G + +Y +++ + + E A
Sbjct: 449 GLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPA 508
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
LRL+ M+E+ + P +TY +L++GLC+ L+ A + N+ V ++ + + + +
Sbjct: 509 LRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHA 568
Query: 550 LCR 552
C+
Sbjct: 569 YCK 571
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 68/126 (53%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
++N++V C+ G L +A + M+ GL PD YN+L+ A CR+ +L A+ L +M
Sbjct: 210 TFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 269
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G + TYN L+S F+ +G I+ A ++ +M G PD TY L GLCQ +
Sbjct: 270 KRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKV 329
Query: 522 QAAFEV 527
AF +
Sbjct: 330 DEAFRL 335
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 6/205 (2%)
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
VL+AL S S++ P++++ F +IE P T + L C + + + +
Sbjct: 177 VLSALSRSPSTL-PQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQ 235
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D +YN +++ C G L EA ++ MKR G+ P YN+L+ A R ++
Sbjct: 236 GFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIK 295
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA-PDATTYTSL 511
A K+ + M A G +L+TYN+L + G+++ A RL M A PD TY +L
Sbjct: 296 QATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTL 355
Query: 512 LEGL----CQETNLQAAFEVFNKSV 532
++ C L+ E+ +K V
Sbjct: 356 VDACFKWRCSSDALRLLEEMRDKGV 380
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 160/345 (46%), Gaps = 3/345 (0%)
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
FS GF ++ C+ + +GQ + +LDE+R + + V ++I+G CK R++EA
Sbjct: 80 FSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSK--PDVVTYNVLINGICKEGRLDEAI 137
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
K L+ + C+P+ I + I+ G + E +L + G +P + I L
Sbjct: 138 KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL 197
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTL 365
+ + A ++ E + T + N L+ G AI + + M+ +G P +
Sbjct: 198 CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDI 257
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
T + L LCK K D VE+ LS+ + +YN ++ L G+ A ++ E
Sbjct: 258 VTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDE 317
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M+RKGL PD+ Y+SL+ RE + A K + + G N TYN ++ + +
Sbjct: 318 MRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQ 377
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ A+ M+ K P TYT L+EG+ E + A ++ N+
Sbjct: 378 TDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNE 422
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 142/316 (44%), Gaps = 34/316 (10%)
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
CK V +A K+LDE+R + KPD + Y ++ G + E L G P
Sbjct: 93 CKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNV 152
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFM 356
I I+ R +C +G++ + +L+ M
Sbjct: 153 ------ITHNIILRSMCS---------TGRWMDAEKLLSD-------------------M 178
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
+ KG P++ T + L LC++ +++ + + + + SYN ++ C ++
Sbjct: 179 LRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKM 238
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
A + M +G PD+ YN+L+ A C++ + A ++ +Q+ + GCS L TYN +
Sbjct: 239 DRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTV 298
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I S+VG+ E A++L M KG+ PD TY+SL+ GL +E + A + F+ +
Sbjct: 299 IDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGI 358
Query: 537 MLARSILSTFMISLCR 552
++ M+ LC+
Sbjct: 359 RPNAITYNSIMLGLCK 374
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%)
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+LS S + CK + + +++ + D+ +YNV+++ +C GRL EA +
Sbjct: 81 SLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 140
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
M G P+V +N ++ + C A+KL M GCS ++ T+NILI+
Sbjct: 141 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQ 200
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
G + A+ + M G P++ +Y LL G C+E + A E + V+
Sbjct: 201 GLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTY 260
Query: 544 STFMISLCR 552
+T + +LC+
Sbjct: 261 NTLLTALCK 269
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 96/240 (40%), Gaps = 14/240 (5%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQI 100
LR SPS+V I L L + + P +P LSY+ +L +++
Sbjct: 179 LRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKM 238
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--N 158
+ L + D Y ++ +L + A + N++ + + P + N
Sbjct: 239 DRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL--SSKGCSPVLITYN 296
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK- 217
+++ L+ G + A+K+ DEM +G++ I + + K+ + + ++
Sbjct: 297 TVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGL 356
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
R N++ S++ G CK ++ + A L + + CKP Y I+ E G
Sbjct: 357 GIRPNAITYNSIML-----GLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEG 411
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/170 (18%), Positives = 81/170 (47%), Gaps = 6/170 (3%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+++L +L +++ +L Q+ + Y +I L + T++A + +E
Sbjct: 258 VTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDE 317
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ + + P+I +SL++ L+ +G +D A+K F ++ G+ + I + + C++
Sbjct: 318 MRR--KGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 375
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
+ + + L + + + ++I G +EA +L+EL
Sbjct: 376 RQTDRAIDFLAYMISKRCKPTEATY--TILIEGIAYEGLAKEALDLLNEL 423
>gi|115470867|ref|NP_001059032.1| Os07g0179000 [Oryza sativa Japonica Group]
gi|34393469|dbj|BAC83029.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|50509181|dbj|BAD30332.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610568|dbj|BAF20946.1| Os07g0179000 [Oryza sativa Japonica Group]
gi|125599319|gb|EAZ38895.1| hypothetical protein OsJ_23314 [Oryza sativa Japonica Group]
gi|215712269|dbj|BAG94396.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767408|dbj|BAG99636.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 727
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 123/514 (23%), Positives = 233/514 (45%), Gaps = 31/514 (6%)
Query: 28 RKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSY 87
++W P + L +L ++P LVA V++ LAL FF WA +Q F H ++
Sbjct: 106 QRWGPPVVAELTKL---RRVAPELVAEVLSARPPPPPPLALPFFLWAGRQKGFRHCFPAF 162
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
H++ LS + A D + ++ + + S ++ + +A +F
Sbjct: 163 HALASLLSAAGLPAAADQLPDLMRAHGKPVSHSQLNLLVRLHTGARRPLRALHALR--RF 220
Query: 148 NCE-DIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
E + PE+ CN +L LA+ G++D+ LK+FDEMSH V + F + +
Sbjct: 221 RHEFSVQPEVHACNRVLGALAAAGHVDDTLKLFDEMSHCSVRPMPVTFAIMVRALARAGM 280
Query: 205 LGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
++L M+ +R R + + +++ ++ G +G +V +E+R PD
Sbjct: 281 TDKLLEMIGRMRAEVCRPDVFVYTALVKTMVRWGHMEG-----CIRVWEEIRRDHVDPDT 335
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+AY + G V + E + + R+ G+ Y I G + R+ + + +
Sbjct: 336 MAYTTMIAGLCNAGMVEKAEELFGEMRRKGLLVDRMVYASLIDGYVSTGRVSDGCRVLKE 395
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+V + D + N LIG + I+ A F ++++ +P+ T+S L L +
Sbjct: 396 MVDAGYRADLGIYNTLIGGLCEIEREDKAHKMFQIVVQEDLIPSSETVSPL---LARYAD 452
Query: 381 SDELVEVYKVLSANDYFTDME--SYNVMVSFL----CTSGRLREAYGVIQEMKRKGLDPD 434
E+V+ + ++ D ++ ++V FL C SG +A V +R+G
Sbjct: 453 KGEMVKFFGLV---DKLVELSLPIVEILVDFLKLFACKSGNELKAVEVFNAFRRRG-HYS 508
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFAS-GCSGNLKTYNILISKFSEVGEIEGALRLF 493
V YN L+E + + A L+++M +S C + TY+ +I F + G IE A +
Sbjct: 509 VGIYNILIENLLKIKERKKALVLFEEMQSSDDCKPDSCTYSHMIPCFVDEGNIEEACSCY 568
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
+ M++ P + Y +L++GLC++ + AA +
Sbjct: 569 NLMMKAVWIPSISAYCALVKGLCKKGEINAAISL 602
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 79/171 (46%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + + L K + + + + V++ + + D +Y M++ LC +G + +A +
Sbjct: 298 PDVFVYTALVKTMVRWGHMEGCIRVWEEIRRDHVDPDTMAYTTMIAGLCNAGMVEKAEEL 357
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
EM+RKGL D Y SL++ + ++ +M +G +L YN LI E
Sbjct: 358 FGEMRRKGLLVDRMVYASLIDGYVSTGRVSDGCRVLKEMVDAGYRADLGIYNTLIGGLCE 417
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
+ + A ++F ++++ + P + T + LL + + F + +K V
Sbjct: 418 IEREDKAHKMFQIVVQEDLIPSSETVSPLLARYADKGEMVKFFGLVDKLVE 468
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 63/150 (42%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
++ +MV L +G + +I M+ + PDV Y +L++ R + ++W+++
Sbjct: 267 TFAIMVRALARAGMTDKLLEMIGRMRAEVCRPDVFVYTALVKTMVRWGHMEGCIRVWEEI 326
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ Y +I+ G +E A LF M KG+ D Y SL++G +
Sbjct: 327 RRDHVDPDTMAYTTMIAGLCNAGMVEKAEELFGEMRRKGLLVDRMVYASLIDGYVSTGRV 386
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLC 551
V + V+ I +T + LC
Sbjct: 387 SDGCRVLKEMVDAGYRADLGIYNTLIGGLC 416
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/149 (19%), Positives = 68/149 (45%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
++ + N ++ L +G + + + EM + P + ++ A R + ++
Sbjct: 229 EVHACNRVLGALAAAGHVDDTLKLFDEMSHCSVRPMPVTFAIMVRALARAGMTDKLLEMI 288
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M A C ++ Y L+ G +EG +R++ + V PD YT+++ GLC
Sbjct: 289 GRMRAEVCRPDVFVYTALVKTMVRWGHMEGCIRVWEEIRRDHVDPDTMAYTTMIAGLCNA 348
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFM 547
++ A E+F + +++ R + ++ +
Sbjct: 349 GMVEKAEELFGEMRRKGLLVDRMVYASLI 377
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 74/421 (17%), Positives = 167/421 (39%), Gaps = 51/421 (12%)
Query: 84 PLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
P+++ ++++L+ + + + ++ +++ D VY ++ ++++ + + V+
Sbjct: 265 PVTFAIMVRALARAGMTDKLLEMIGRMRAEVCRPDVFVYTALVKTMVRWGHMEGCIRVWE 324
Query: 144 EVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
E++ + D +++A L + G ++ A ++F EM +G+ + + I +
Sbjct: 325 EIRRDHVDPDTMAYTTMIAGLCNAGMVEKAEELFGEMRRKGLLVDRMVYASLIDGYVSTG 384
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVL-----IIHGFCKGKRVEEAFKVLDELRIRE-- 256
++ +L E M++ A L +I G C+ +R ++A K+ ++ ++E
Sbjct: 385 RVSDGCRVLKE-------MVDAGYRADLGIYNTLIGGLCEIEREDKAHKMF-QIVVQEDL 436
Query: 257 ------CKPDFIAYRIVAEEFKLMGSV----------------FEREVVLKKKRKLGVAP 294
P Y E K G V F + K +L
Sbjct: 437 IPSSETVSPLLARYADKGEMVKFFGLVDKLVELSLPIVEILVDFLKLFACKSGNELKAVE 496
Query: 295 RTNDYR---EFILGL--IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP--- 346
N +R + +G+ I+ + + KE + +V + D + S + P
Sbjct: 497 VFNAFRRRGHYSVGIYNILIENLLKIKERKKALVLFEEMQSSDDCKPDSCTYSHMIPCFV 556
Query: 347 -----RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
A +N M++ +P++S L K LCK+ + + + + K N ME
Sbjct: 557 DEGNIEEACSCYNLMMKAVWIPSISAYCALVKGLCKKGEINAAISLVKDCLGNVENGPME 616
Query: 402 -SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
Y + + C S + V+ EM G + Y++++ C+ A+K+
Sbjct: 617 FKYTLTILEACQSKSPEKVIKVVDEMIELGYSIEEIIYSAIIYGFCKYASSTEARKVLST 676
Query: 461 M 461
M
Sbjct: 677 M 677
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMF 177
DS Y +IP + N ++A S +N + +L+ L G I+ A+ +
Sbjct: 544 DSCTYSHMIPCFVDEGNIEEACSCYNLMMKAVWIPSISAYCALVKGLCKKGEINAAISLV 603
Query: 178 DE----MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLII 233
+ + + +EF + + I + C++ +V+ ++DE+ + S+ +I II
Sbjct: 604 KDCLGNVENGPMEFK---YTLTILEACQSKSPEKVIKVVDEMIELGYSI--EEIIYSAII 658
Query: 234 HGFCKGKRVEEAFKVLDELRIRE--CKPDFIAY 264
+GFCK EA KVL +R R + ++I Y
Sbjct: 659 YGFCKYASSTEARKVLSTMRDRNIISEANYIVY 691
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 207/449 (46%), Gaps = 10/449 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++++S+L L R++ S+LK+++VN D Y + L++ + A ++ +
Sbjct: 282 ITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQ 341
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
I + LL L G ++ A ++ + + G+ + + F+ +C
Sbjct: 342 ATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGD 401
Query: 205 LGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ + + ++ + R NS+ S +I FC K +++A + + ++ + P
Sbjct: 402 MNKAILTIERMESFGLRPNSITFNS-----LIDKFCDMKEMDKAEEWVKKMAEKGVTPSV 456
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
Y + + + + + +L++ ++GV P Y I L + +I EA+ +
Sbjct: 457 ETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRD 516
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
++ + V N LI GS + A+ FF+ M+ PTL T + L LCK+ K
Sbjct: 517 MICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGK 576
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
E + ++++ + D+ +YN ++S +G + + G+ + MK G+ P V Y+
Sbjct: 577 LTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHP 636
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L+ C +E + +KL+++M + YN +I ++E+G + A L ML++G
Sbjct: 637 LISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQG 695
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ PD TY SL+ G +E L ++ N
Sbjct: 696 IHPDKMTYNSLILGHFREGKLSNIKDLVN 724
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 172/411 (41%), Gaps = 42/411 (10%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
I N L+ L + I +A KMFDEM + + S + + I +C+ +L M +
Sbjct: 213 IYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRE-- 270
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
R +E S+ + ++ G CK ++++EA +L E+ + PD Y I+ +
Sbjct: 271 RMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCD 330
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFIL--GLIVERRICEAKELGEVIVSGKFTIDDDV 333
+ ++ + G+ R N+Y IL GL + ++ +A+E+ + D+ +
Sbjct: 331 DGNGAMELYEQATEKGI--RINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVI 388
Query: 334 LNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
N + I D AI+ M G P T ++L C + D+ E K ++
Sbjct: 389 YNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMA 448
Query: 393 ANDYFTDMESYNVMV-----------------------------------SFLCTSGRLR 417
+E+YN ++ + LC G++
Sbjct: 449 EKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKIL 508
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
EA V+++M +G+ P+ YN L++ C ++ A + +D+M S S L TYN+LI
Sbjct: 509 EAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLI 568
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ G++ A + G +PD TY SL+ G N+ ++
Sbjct: 569 DGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLY 619
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 157/350 (44%), Gaps = 3/350 (0%)
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+F E+ + G T + I + L + LD +RKR + I ++I G
Sbjct: 163 LFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKR--GVRPNVFIYNVLIGG 220
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
C+ KR+ +A K+ DE+ + Y + + + +G + + ++ ++ VAP
Sbjct: 221 LCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPN 280
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFN 354
+ + GL R++ EA+ L + + F D + L G + D A+ +
Sbjct: 281 IITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYE 340
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
EKG T S L LCK+ K ++ E+ K + N D YN V+ C G
Sbjct: 341 QATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIG 400
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ +A I+ M+ GL P+ +NSL++ C + A++ +M G + +++TYN
Sbjct: 401 DMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYN 460
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
LI + ++ + ++ M E GV P+ +Y SL+ LC++ + A
Sbjct: 461 TLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEA 510
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 188/449 (41%), Gaps = 17/449 (3%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N+T S L L L ++ + +LK+ N + D +Y + + + KA
Sbjct: 351 NYTGSIL-----LNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKA 405
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI-- 196
++ NSL+ +D A + +M+ +GV S + I
Sbjct: 406 ILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDG 465
Query: 197 -WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
K C + Q+L ++E+ + N + GS+I L CK ++ EA VL ++ R
Sbjct: 466 YGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCL-----CKDGKILEAEIVLRDMICR 520
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
P+ Y ++ + ++G V + + + ++P Y I GL + ++ EA
Sbjct: 521 GVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEA 580
Query: 316 KELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
++ I S + D N+LI G ++ + + + M G PT+ T L
Sbjct: 581 EDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG 640
Query: 375 LCKRNKSDELVE-VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
K + ELVE +Y + + D YN M+ G ++AY + Q M +G+ P
Sbjct: 641 CSK--EGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHP 698
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
D YNSL+ RE L K L + M A + TY+IL+ ++ + GA +
Sbjct: 699 DKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWY 758
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
M+E P+A+ L GL QE LQ
Sbjct: 759 REMVENNFLPNASICNELTAGLEQEGRLQ 787
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 97/178 (54%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
R A+ + FM G++P+L +LS L L + ++V+++ + + + TD Y
Sbjct: 123 REAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDTFMYAKA 182
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ L+ + M+++G+ P+V YN L+ CRE +R A+K++D+M
Sbjct: 183 IQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINL 242
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G++ TYN LI + +VGE++ A ++ M EK VAP+ T+ SLL GLC+ ++ A
Sbjct: 243 VGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEA 300
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 105/217 (48%)
Query: 336 ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
A+ +V + + + F + M ++G P + + L LC+ + + +++ + +
Sbjct: 182 AIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNIN 241
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ +YN ++ C G L A+ + + MK K + P++ +NSL+ C+ ++ A+
Sbjct: 242 LVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEAR 301
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L +M +G + TY+IL + GA+ L+ EKG+ + T + LL GL
Sbjct: 302 SLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGL 361
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
C++ ++ A E+ K + ++ I +TF+ CR
Sbjct: 362 CKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCR 398
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 75/151 (49%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YNV++ LC R+R+A + EM L + YN+L++ C+ L A K+ ++M
Sbjct: 214 YNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMK 273
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
+ N+ T+N L+S ++ +++ A L M G PD TY+ L +GL + +
Sbjct: 274 EKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGN 333
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
A E++ ++ + + S + LC++
Sbjct: 334 GAMELYEQATEKGIRINNYTGSILLNGLCKQ 364
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 162/387 (41%), Gaps = 14/387 (3%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++++S++ ++++ + +K++ +T Y +I + + F + +
Sbjct: 422 ITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQ 481
Query: 145 VKFNCEDIG--PEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+ E+IG P + + SL+ L DG I A + +M RGV + + + I C
Sbjct: 482 M----EEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSC 537
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
K+ L DE+ + E I+ +++ ++I G CK ++ EA L ++ P
Sbjct: 538 MVGKVKDALRFFDEMMRSE---ISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSP 594
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D I Y + + G+V + + + + LG+ P Y I G E I ++L
Sbjct: 595 DVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLY 653
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
++ D V NA+I + I + + A M+++G P T ++L +
Sbjct: 654 NEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFRE 713
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
K + ++ + A + ++Y+++V C AY +EM P+ S
Sbjct: 714 GKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASIC 773
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASG 465
N L +E L+ + + +M G
Sbjct: 774 NELTAGLEQEGRLQEVQVICSEMNVKG 800
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 9/196 (4%)
Query: 362 VPTLSTLSNLSKNLCKRNKS-DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
+P TLS++ ++C ++K E VE+Y+ + + + S +++ S L + +
Sbjct: 102 IPLRITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVV 161
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+ E++ G D Y ++A + L+ + D M G N+ YN+LI
Sbjct: 162 DLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGL 221
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDV 536
I A ++F M + TY +L++G C+ L AAF++ KSV ++
Sbjct: 222 CREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNI 281
Query: 537 MLARSILSTFMISLCR 552
+ S+LS LC+
Sbjct: 282 ITFNSLLS----GLCK 293
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 125/544 (22%), Positives = 227/544 (41%), Gaps = 53/544 (9%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDS 105
+L+P +RV+ L LAL FF WA + F H+ +Y ++ L +R + ++
Sbjct: 95 ALAPIWASRVLVE-LCQDARLALRFFEWAKGRIGFQHTSEAYCILVHILFCARFYSDANA 153
Query: 106 VLKQVKVNKITLDS------------------SVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
VLK++ + L S V+ + +LI+ ++A F +++
Sbjct: 154 VLKELICLRRVLPSWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRK 213
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
P CN+LL L+ G D + K F +M G++ S + + I C+ L
Sbjct: 214 FRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEM 273
Query: 208 VLSMLDEVRK--------RENSMING--------SVIAVL-----------------IIH 234
S+ ++++ NS+I+G I + +I+
Sbjct: 274 ARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALIN 333
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
FCK +R+ +AF+ L E++ KP+ + Y + F G + E R++ + P
Sbjct: 334 CFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTP 393
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFF 353
Y I + EA +L E I+ ++ AL+ G + A F
Sbjct: 394 NEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVF 453
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
M+ G P T + L K + + ++ K + D+ Y ++ LC
Sbjct: 454 RAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNE 513
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
RL EA +I E+K G++ + Y +LM+A + A L ++M G TY
Sbjct: 514 SRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTY 573
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
LI + G ++ A+ F M E G+ P+ YT+L++GLC+ + A ++F++ ++
Sbjct: 574 CALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLD 633
Query: 534 HDVM 537
+M
Sbjct: 634 KGMM 637
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 195/461 (42%), Gaps = 13/461 (2%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ FT ++Y+S++ ++ + +Q+K D Y +I + +
Sbjct: 282 KEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERM 341
Query: 136 QKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
KAF +E+K N + P + ++ + +G + A+K F +M + + +
Sbjct: 342 PKAFEFLHEMKAN--GLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYT 399
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
I C+ L + L +++E+ + + V ++ G C+ R++EA +V +
Sbjct: 400 SLIDANCKAGNLAEALKLVEEILQAGIKL--NVVTYTALLDGLCEEGRMKEAEEVFRAML 457
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
P+ Y + F + + +LK+ ++ + P Y + GL E R+
Sbjct: 458 NAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLE 517
Query: 314 EAKEL-GEVIVSGKFT---IDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
EAK L GE+ SG T I +++A S + + A+ M++ G + T T
Sbjct: 518 EAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATE---ALTLLEEMLDLGLIATEVTYC 574
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
L LCK E + + +S ++ Y +V LC + A + EM K
Sbjct: 575 ALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDK 634
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
G+ PD Y +L++ + L+ A L D+M G +L Y LI S G+++ A
Sbjct: 635 GMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKA 694
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
L M+ KGV PD Y L++ + A E+ N+
Sbjct: 695 RNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNE 735
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 110/236 (46%), Gaps = 9/236 (3%)
Query: 315 AKELGEVIVSGKFTIDDDVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
A+ L + FT D N+LI G + +D I F M + P + T + L
Sbjct: 274 ARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLD--ECICIFEQMKDADCDPDVITYNAL 331
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
CK + + E + AN ++ +Y+ + C G L+EA +M+R L
Sbjct: 332 INCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVAL 391
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
P+ Y SL++A C+ L A KL +++ +G N+ TY L+ E G ++ A
Sbjct: 392 TPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEE 451
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN----KSVNHDVMLARSIL 543
+F ML GVAP+ TYT+L+ G + ++ A ++ K + D++L +IL
Sbjct: 452 VFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTIL 507
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 188/433 (43%), Gaps = 8/433 (1%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCE-DIGPEICNSLLAVLASDGYIDNALKM 176
D+ Y +I L + + T A + ++K NC+ D+ ++ L DG AL M
Sbjct: 1050 DAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVF--TYGMIIDALCKDGMTTEALDM 1107
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHG 235
F EM G+ + + + C +L + L E+ R I+ V +IHG
Sbjct: 1108 FSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRG---ISADVYTYNSLIHG 1164
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
+ +E L+ + R PD + I+ + G V E + +L+ R G P
Sbjct: 1165 LSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPD 1224
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFN 354
Y + GL + ++ +A +L E + ++ N LI G A FF
Sbjct: 1225 ILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFE 1284
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M KG P+ T + L LC+ + +++ + F + +Y V++ LC +G
Sbjct: 1285 EMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNG 1344
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
L EA + Q +K+ P++ ++ L++ CR L A K +D++ +G + YN
Sbjct: 1345 HLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYN 1404
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
ILI+ G + A++L M EKG PD+ T+ +++ L +E + A ++ + N
Sbjct: 1405 ILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNR 1464
Query: 535 DVMLARSILSTFM 547
+ ++ S +
Sbjct: 1465 NFSPDEAVTSMLL 1477
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 166/363 (45%), Gaps = 6/363 (1%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
I +A+++FDEM+ +G+ +G+ I C+ K G + + ++++ G V
Sbjct: 1032 IPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGN----CKGDVFT 1087
Query: 230 V-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+II CK EA + E+ PD + Y + + G + E K+
Sbjct: 1088 YGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEME 1147
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPR 347
G++ Y I GL E ++V F+ D LI G
Sbjct: 1148 GRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVG 1207
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A M KG+ P + T + L LC + ++ ++++ L+ ++ SYN+++
Sbjct: 1208 EAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILI 1267
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+ C ++ EA+ +EM+ KGL P YN+L+ A C+ +R A+KL+ +M G
Sbjct: 1268 NGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQF 1327
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
L TY +L+ + G +E A+ LF ++ + P+ ++ LL+G+C+ L+ A++
Sbjct: 1328 LKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQ 1387
Query: 528 FNK 530
F++
Sbjct: 1388 FDE 1390
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 162/370 (43%), Gaps = 44/370 (11%)
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
V +T+ GV++ EN + + + DE+ K+ ++ + ++I+G CK ++
Sbjct: 1016 AVTVTTLVKGVWM----ENG-IPDAVQLFDEMTKK--GLLGDAKTYGILINGLCKARKTG 1068
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
A K+ ++++ CK D Y ++ + G E + + G+ P Y +
Sbjct: 1069 LAIKLHEKMK-GNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 1127
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFF-NFMIEKGRV 362
GL R+ EA E + + + D N+LI +S + +F N M+++G
Sbjct: 1128 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 1187
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P D FT + +++ LC G++ EA +
Sbjct: 1188 P-------------------------------DAFT----FTILIDGLCKEGKVGEAQQI 1212
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
++ M+ KG +PD+ YN+LM C L A KL++ + G N+ +YNILI+ + +
Sbjct: 1213 LELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCK 1272
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
+I+ A R F M KG+ P TY +L+ LCQ ++ A ++F + L S
Sbjct: 1273 DQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLST 1332
Query: 543 LSTFMISLCR 552
+ LC+
Sbjct: 1333 YCVLLDGLCK 1342
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 130/278 (46%), Gaps = 5/278 (1%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
L+Y++++ L L Q+ + + + I L+ Y +I + + +AF F E
Sbjct: 1226 LTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEE 1285
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ N+L+ L G + A K+F EM G + V + C+N
Sbjct: 1286 MRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGH 1345
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + + + ++K E+ N V ++L + G C+ ++EEA+K DE+ +PD IAY
Sbjct: 1346 LEEAMDLFQSIKKTEHKP-NIEVFSIL-LDGMCRAGKLEEAWKQFDEISKNGLEPDTIAY 1403
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
I+ G + E +L + + G P + + I L+ E I EA +L E + +
Sbjct: 1404 NILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRN 1463
Query: 325 GKFTIDDDVLNALIGSVSSIDPR--SAIVFFNFMIEKG 360
F+ D+ V + L+ ++S DP+ +A+V ++KG
Sbjct: 1464 RNFSPDEAVTSMLL-CLASFDPQWHAALVSLPNALQKG 1500
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 85/178 (47%), Gaps = 2/178 (1%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S ++Y++++ +L S ++ + +++ L S Y ++ L + + ++A +F
Sbjct: 1294 STVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLF 1353
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+K E+ + LL + G ++ A K FDE+S G+E TI + + I C
Sbjct: 1354 QSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNK 1413
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
L + + +L ++ E + S+ +II K + EA ++L+E+R R PD
Sbjct: 1414 GMLSEAVKLLWQM--EEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 1469
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 98/204 (48%), Gaps = 1/204 (0%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F+ + +P T ++L ++ K + +Y+ ++ D+ + N+++
Sbjct: 930 AIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIH 989
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C+ + +GV ++G +PD +L++ E+ + A +L+D+M G G
Sbjct: 990 CCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLG 1049
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ KTY ILI+ + + A++L H ++ D TY +++ LC++ A ++F
Sbjct: 1050 DAKTYGILINGLCKARKTGLAIKL-HEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMF 1108
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
++ + ++ + S+ M LCR
Sbjct: 1109 SEMIGAGILPDVVVYSSLMDGLCR 1132
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 182/392 (46%), Gaps = 9/392 (2%)
Query: 159 SLLAVLASDGYIDNALKMFDEM----SHRGVEFS--TIGFGVFIWKFCENAKLGQVLSML 212
+L+ L G I ALK+ EM S G+ F I + + I C++ + + +
Sbjct: 206 TLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLF 265
Query: 213 DEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
+E++ + M + +IHGFC G + EEA ++ +E+ + +P+ + + ++ +
Sbjct: 266 EEMKVQ--GMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLC 323
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
G V E + +L+ + G+ P Y I G + + A+EL + S D
Sbjct: 324 KEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVI 383
Query: 333 VLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
LI G + A+ +N M++ G+ P + T L L + K + +++ V+
Sbjct: 384 CYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVM 443
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
D+ Y + ++ LC +G L EA + ++K + D+ +N L++ C+ L
Sbjct: 444 KVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKL 503
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A +L++++ ++ TYNI+I +F G++ A LF M + G PD TY +L
Sbjct: 504 ETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATL 563
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
+ G + L+ E+ + V DV L +IL
Sbjct: 564 IRGFFESKKLEKVVELLHMMVQRDVSLDVNIL 595
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 172/403 (42%), Gaps = 15/403 (3%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL+ LA + ++++M G+ + + C ++G+ L+++ + +R
Sbjct: 102 LLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRR- 160
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
I V +I G C R+ +A + ++ C P+ I Y + + G++
Sbjct: 161 -GYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNI-- 217
Query: 280 REVVLKKKRKL---------GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
+ LK +++ P Y I L +RR EA++L E + T
Sbjct: 218 -SIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPT 276
Query: 331 DDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
+LI G A FN M+ +G P + T + L LCK K E ++ +
Sbjct: 277 VISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLE 336
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
V+ ++ +YN ++ C G L A + M KG +PDV Y L+ C+
Sbjct: 337 VMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTS 396
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
+ A KL++ M G ++KTY L++ + G++ A +LF M G+ D Y
Sbjct: 397 KVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYG 456
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L GLC+ L A E+FNK ++++ L + + LC+
Sbjct: 457 IFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCK 499
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 99/253 (39%), Gaps = 41/253 (16%)
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+I A FF+ M+ P LS+ ++L L K ++ +Y + + D
Sbjct: 73 GNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCC 132
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+ N++++ LC R+ E V+ + R+G PD+ Y +L++ C E + A L+ +M
Sbjct: 133 TLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRM 192
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE----------------------- 498
GC+ N TY L+ G I AL+L ML
Sbjct: 193 QKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDAL 252
Query: 499 ------------------KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
+G+ P +YTSL+ G C + A +FN+ VN V
Sbjct: 253 CKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNV 312
Query: 541 SILSTFMISLCRR 553
+ + LC+
Sbjct: 313 VTFNVLIDVLCKE 325
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 153/373 (41%), Gaps = 50/373 (13%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
NF +SY I+ +L R+ + + +++KV +T Y +I G ++A
Sbjct: 237 NFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEA 296
Query: 139 FSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+FNE+ + + P + N L+ VL +G + A + + M RG+ + + + I
Sbjct: 297 KRLFNEMVN--QGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLI 354
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGS-----VIAVLIIHGFCKGKRVEEAFKVLDE 251
FC ++ L+ R+ SM + + ++I+G+CK +VEEA K+ +
Sbjct: 355 EGFC-------LVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNG 407
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ +PD Y + G V + + + + G+ Y F+ GL
Sbjct: 408 MLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGC 467
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
+ EA EL + S +D + N LI
Sbjct: 468 LFEAMELFNKLKSYNIKLDIECFNCLI--------------------------------- 494
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
LCK K + E+++ L + D+ +YN+M+ C G++ +A + Q+M++ G
Sbjct: 495 -DGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGC 553
Query: 432 DPDVSFYNSLMEA 444
PD Y +L+
Sbjct: 554 TPDKITYATLIRG 566
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 205/456 (44%), Gaps = 15/456 (3%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSL-----SLSRQINAIDSVLKQVKVNKITLDSSV 121
AL + A++ F + LSY+++L +L S R + + V + + N ++ +
Sbjct: 151 ALTLLHLANRH-GFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYT 209
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDE 179
Y II ++ + +K K E I P + N+L+ + A+ +
Sbjct: 210 YNVIIRGVVSQGDLEKGLGFMR--KMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRA 267
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M+ GV + I + I C ++ +V +++E+R + ++ V +++GFCK
Sbjct: 268 MAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGK--GLVPDEVTYNTLVNGFCKE 325
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+ + +L E+ + P+ + Y + G++ + + R G+ P Y
Sbjct: 326 GNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTY 385
Query: 300 REFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMI 357
I G + + EA K L E+IVSG F+ NAL+ + + A+ M+
Sbjct: 386 TTLIDGFCQKGLMNEAYKVLSEMIVSG-FSPSVVTYNALVHGYCFLGRVQEAVGILRGMV 444
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
E+G P + + S + C+ + + ++ + + D +Y+ ++ LC +L
Sbjct: 445 ERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLV 504
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
EA+ + +EM R+GL PD Y SL+ A C + L A +L D+M G + TY++LI
Sbjct: 505 EAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLI 564
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
+ ++ + A RL + + PD TY +L+E
Sbjct: 565 NGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIE 600
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 130/535 (24%), Positives = 224/535 (41%), Gaps = 49/535 (9%)
Query: 46 SLSPSLVARVINPYLLTHHS---LALGFFNWA---SQQPNFTHSP----LSYHSILKSLS 95
SLSP + + LL S L F WA +Q NF +P L+ H IL
Sbjct: 32 SLSPHFTPQAASYVLLNSQSDQRTLLNFLTWAQAQAQAHNFFFTPHCKCLALH-ILVRFK 90
Query: 96 LSRQINAIDSVLKQVKVNKITLD------------------SSVYRFIIPSLIQGKNTQK 137
L R +++ + L + S+V+ ++ SL + K
Sbjct: 91 LYRTAHSLAADLAATLPDPTGASLFRHLHDTFHLCSSPFSSSAVFDLVVKSLSRLGFVPK 150
Query: 138 AFSVFNEVKFNCEDIGPEIC--NSLLAVL---ASDGY--IDNALKMFDEMSHRGVEFSTI 190
A ++ + N P + N++L L +S + D+A ++F +M GV +
Sbjct: 151 ALTLLHLA--NRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVY 208
Query: 191 GFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVL 249
+ V I L + L + RK E I+ +V+ +I CK K+V+EA +L
Sbjct: 209 TYNVIIRGVVSQGDLEKGLGFM---RKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALL 265
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
+ + + I+Y V G + E ++++ R G+ P Y + G E
Sbjct: 266 RAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKE 325
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTL 368
+ + L +V + + LI + S A+ F+ M +G P T
Sbjct: 326 GNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTY 385
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ L C++ +E +V + + + + +YN +V C GR++EA G+++ M
Sbjct: 386 TTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVE 445
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
+GL PDV Y++++ CRE L A ++ ++M G + TY+ LI ++
Sbjct: 446 RGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVE 505
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
A LF M+ +G+ PD TYTSL+ C + L A + HD M+ R L
Sbjct: 506 AFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRL------HDEMVQRGFL 554
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/477 (20%), Positives = 198/477 (41%), Gaps = 52/477 (10%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
LGF ++ + + ++Y++++ + +++ ++L+ + V + + Y +I
Sbjct: 226 GLGFMRKMEKE-GISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVI 284
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVE 186
L + + E++ N+L+ +G + L + EM +G+
Sbjct: 285 NGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLS 344
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
+ + + I C+ L + + + D++R R + +I GFC+ + EA+
Sbjct: 345 PNVVTYTTLINCMCKAGNLSRAVEIFDQMRVR--GLRPNERTYTTLIDGFCQKGLMNEAY 402
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
KVL E+ + P + Y + + +G V E +L+ + G+ P Y I G
Sbjct: 403 KVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGF 462
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
C +ELG+ F + ++ M+EKG +P
Sbjct: 463 ------CRERELGKA-----FQMKEE-----------------------MVEKGVLPDTV 488
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T S+L + LC + K E ++++ + D +Y +++ C G L +A + EM
Sbjct: 489 TYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEM 548
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS--EVG 484
++G PD Y+ L+ ++ + AK+L ++F + TYN LI S E
Sbjct: 549 VQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFK 608
Query: 485 EIEG-------------ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+EG A R+F ML++ P+A Y ++ G + N+ A+ ++
Sbjct: 609 SVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLY 665
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 143/310 (46%), Gaps = 1/310 (0%)
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
++A +V ++ P+ Y ++ G + + ++K K G++P Y
Sbjct: 189 DDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTL 248
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI-VFFNFMIEKGR 361
I ++++ EA L + G + N++I + S + M KG
Sbjct: 249 IDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGL 308
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
VP T + L CK + + + + ++ +Y +++ +C +G L A
Sbjct: 309 VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVE 368
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+ +M+ +GL P+ Y +L++ C++ L+ A K+ +M SG S ++ TYN L+ +
Sbjct: 369 IFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYC 428
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
+G ++ A+ + M+E+G+ PD +Y++++ G C+E L AF++ + V V+
Sbjct: 429 FLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTV 488
Query: 542 ILSTFMISLC 551
S+ + LC
Sbjct: 489 TYSSLIQGLC 498
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 142/341 (41%), Gaps = 10/341 (2%)
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+S + S + L++ + V +A +L P ++Y V + S
Sbjct: 126 SSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNH 185
Query: 280 R-----EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
R E V + + GV+P Y I G++ + + K LG + K I +V+
Sbjct: 186 RDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDL--EKGLGFMRKMEKEGISPNVV 243
Query: 335 --NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
N LI S + A+ M G L + +++ LC + + E+ E+ + +
Sbjct: 244 TYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEM 303
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
D +YN +V+ C G L + ++ EM KGL P+V Y +L+ C+ L
Sbjct: 304 RGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNL 363
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A +++DQM G N +TY LI F + G + A ++ M+ G +P TY +L
Sbjct: 364 SRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNAL 423
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ G C +Q A + V + ST + CR
Sbjct: 424 VHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCR 464
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/486 (19%), Positives = 203/486 (41%), Gaps = 71/486 (14%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY+S++ L +++ + ++++++ + D Y ++ + N + + +E
Sbjct: 278 ISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSE 337
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ + + P + +L+ + G + A+++FD+M RG+ + + I FC+
Sbjct: 338 MV--GKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQK 395
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRECK 258
+ + +L E+ +++G +V+ ++HG+C RV+EA +L + R
Sbjct: 396 GLMNEAYKVLSEM------IVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLP 449
Query: 259 PDFIAYRIVAEEF---KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
PD ++Y V F + +G F+ + + +K GV P T Y I GL +++++ EA
Sbjct: 450 PDVVSYSTVIAGFCRERELGKAFQMKEEMVEK---GVLPDTVTYSSLIQGLCLQQKLVEA 506
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKN 374
+L ++ D+ +LI + S A+ + M+++G +P T S L
Sbjct: 507 FDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLING 566
Query: 375 LCKRNKS------------DELVE---VYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
L K+ ++ +E V Y L N + +S +V C G + EA
Sbjct: 567 LNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEA 626
Query: 420 YGVIQEMKRKGLDPDVSFYN-----------------------------------SLMEA 444
V + M ++ P+ + YN +L++A
Sbjct: 627 DRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKA 686
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
RE + +L + S + K +L+ + G ++ L + M + G+ PD
Sbjct: 687 LAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPD 746
Query: 505 ATTYTS 510
++S
Sbjct: 747 GGIHSS 752
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 134/579 (23%), Positives = 232/579 (40%), Gaps = 118/579 (20%)
Query: 8 DLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVI--NPYLLTHHS 65
DL IS+AI + + P L++ L SL+P V+++I NP L S
Sbjct: 48 DLLCEISEAINDSETKHEKGYSENPRLKRIL------PSLTPRHVSKLITLNPLCLPPSS 101
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
L L FFN + +P F H+ SY ++L L L R + S +
Sbjct: 102 L-LSFFNHLASRPPFRHTLHSYCTMLHFLCLHRMLPQAHS-------------------L 141
Query: 126 IPSLIQGKNTQKAFSVFNEV-------KFNCEDIGPEICNSLLAVLASDGYIDNALKMFD 178
+ L+ K T A ++F+ + + +G + ++L++ G+ +A++ F
Sbjct: 142 VSFLVSRKGTNSASTLFSSILRTMPRHHHHHHSVG-LVFDALISAYVDSGFTPDAVQCFR 200
Query: 179 EMSHRGVEFSTIGFGVFIWKFCEN-----AKLGQV---------LSMLDEVRKRENSMIN 224
++ G CEN +L V L +LD + N
Sbjct: 201 LVTKNKFPVPIRG--------CENLLRRVVRLRPVEIERSWALYLEVLDSGYPPKIYFFN 252
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI----------VAEEFKLM 274
+++HGFCK V A V DE+ R +P +++ V E F+L
Sbjct: 253 ------VLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLK 306
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G V E E GV P + I GL E R+ E
Sbjct: 307 G-VMESE---------GVCPDVFTFSALINGLCKEGRLDEGS------------------ 338
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+ F+ M +G VP T + L CK K D ++ ++++ A
Sbjct: 339 ----------------LLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQ 382
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D+ +YN +++ LC G L+EA ++ EM GL PD + +L++ CC++ + A
Sbjct: 383 GVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESA 442
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++ +M G + + LIS G + A R+ +ML G PD TYT +++
Sbjct: 443 LEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDC 502
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
C++ +++ F++ + + + + M LC++
Sbjct: 503 FCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQ 541
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 119/526 (22%), Positives = 235/526 (44%), Gaps = 18/526 (3%)
Query: 30 WTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHS 89
W LE L +L LR SL P V V+ L + +AL FF WA +Q + H P+ Y+
Sbjct: 86 WNAKLEGDLRRL-LR-SLKPRQVCAVLQ--LQSDERIALDFFYWAGRQWRYRHDPIVYYM 141
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
+L+ LS ++ VL+ + I + ++ S + + A V ++
Sbjct: 142 MLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAG 201
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ ICN+ + VL ++ AL+ + M G+ + + + I +C+ ++ +
Sbjct: 202 VEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAM 261
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGF-CKGKRVEEAFKVLDELRIRECK--PDFIAYRI 266
++ E+ + S V+ GF C+ KR++E +++++ +++ K PD + Y
Sbjct: 262 ELIAEMPFKGCPPDKVSYYTVM---GFLCQDKRIKEVRNLMEKM-VKDNKLFPDQVTYNT 317
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ G E L++ + G Y + ++ R+ AKE+ +++
Sbjct: 318 LVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKG 377
Query: 327 FTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
+ D A++ + + A M + G P + + L LC+ S E
Sbjct: 378 CSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAR 437
Query: 386 EVYKVLSANDYFT-DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
E+ S D++T + +Y+V++ L G+L EA V++EM KG P N L+++
Sbjct: 438 EMMNT-SEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKS 496
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C E + AKK ++ GC+ N + +I F + I+ AL L +M PD
Sbjct: 497 LCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPD 556
Query: 505 ATTYTSLLEGLCQETNLQAA----FEVFNKSVNHDVMLARSILSTF 546
A T+T++++ L ++ ++ A ++ K ++ + R+++ +
Sbjct: 557 AVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQY 602
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 202/476 (42%), Gaps = 16/476 (3%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
Q T + ++Y+ ++K Q+ ++ ++ D Y ++ L Q K
Sbjct: 233 QLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRI 292
Query: 136 QKAFSVFNE-VKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
++ ++ + VK N + P+ N+L+ +L+ G+ D AL+ E RG + +G+
Sbjct: 293 KEVRNLMEKMVKDN--KLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGY 350
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
+ FC ++ + +++E+ + S V +++G CK +VEEA K+L ++
Sbjct: 351 SAIVNSFCMQGRMDRAKEIVNEMITKGCS--PDVVTYTAVVNGLCKVGKVEEAKKMLQQM 408
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
CKP+ ++Y + G+ E ++ + P Y + GL E ++
Sbjct: 409 YKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKL 468
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
EA ++ +++ F +N LI S+ A F + +G + +
Sbjct: 469 SEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTV 528
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
C+ + D + + + N+ D ++ ++ L GR+ EA +M +KGL
Sbjct: 529 IHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGL 588
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFA-SGCSGNLKTYNILISKFSEVGEIEGAL 490
DP Y +++ C+ + KL +M + S C YN +I K G E A
Sbjct: 589 DPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSKCR---TAYNQVIEKLCNFGNPEAAD 645
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV----FNKSVNHDVMLARSI 542
++ +L DA T L+E + +A++V F++++ D+ L +
Sbjct: 646 KVVGLVLRTASRIDANTCHMLMESYLSKGIPLSAYKVACRMFDRNLIPDLKLCEKL 701
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 115/481 (23%), Positives = 202/481 (41%), Gaps = 21/481 (4%)
Query: 63 HHSLALGFFNWASQQPNFTHSPLSYHSILKS--LSLSRQINAIDSVLKQVKVNKITLDS- 119
H LAL F W +QP L++ L + L +R ++ S+L+ + I S
Sbjct: 89 HGRLALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSI 148
Query: 120 ---------------SVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
SV+ +I ++ A F V CN +LA +
Sbjct: 149 FGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASM 208
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
D + +F EMS +G+ + F + I C L + ++L ++ EN +
Sbjct: 209 VKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQME--ENGFVP 266
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
V +++ +CK R + A +++D + + + D Y + + + ++L
Sbjct: 267 TIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLL 326
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
KK RK ++P Y I G + E +I A ++ + + + NALIG +
Sbjct: 327 KKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHV 386
Query: 345 -DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
D A+ + M G T L LCK K + + + + ND +Y
Sbjct: 387 GDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAY 446
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
V++ LC +G L EA ++ M + G++PDV Y+SL+ CR ++ AK++ +M+
Sbjct: 447 TVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYR 506
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
SG N Y+ LI F + G + A++++ M G D T L+ LC++ L
Sbjct: 507 SGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGE 566
Query: 524 A 524
A
Sbjct: 567 A 567
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 205/484 (42%), Gaps = 32/484 (6%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y S++ I + ++ ++ + + L+ +Y +I + Q N +A V+
Sbjct: 479 ITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVY-- 536
Query: 145 VKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
NC G + CN L++ L DG + A K MS G+ ++I + I +
Sbjct: 537 AVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSI 596
Query: 203 AKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
S D++ K + GS ++ G CKG + EA K L+ L
Sbjct: 597 GDPLNAFSFFDDMIKCGQHPSFFTYGS-----LLKGLCKGGNLVEAKKFLNRLHYIPGAV 651
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL- 318
D + Y + E G++ E + K + V P + Y + GL + + A L
Sbjct: 652 DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLF 711
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
G + G + + L+ +S P++A FF M++KG P + + + +
Sbjct: 712 GTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSR 771
Query: 378 RNKSDELVEVYKVLSANDYFTDME---------SYNVMVSFLCTSGRLREAYGVIQEMKR 428
R + ++ AND+F+ M +YN+++ L + M R
Sbjct: 772 RGQ---------MMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMR 822
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
+G+ PD ++SL+ + + KL +M G + T+NILI+K+SE G++
Sbjct: 823 EGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRK 882
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
A L + M GV PD TY + GL +++ + + V ++ + + V+ + T +
Sbjct: 883 AFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLIN 942
Query: 549 SLCR 552
+CR
Sbjct: 943 GMCR 946
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 109/483 (22%), Positives = 195/483 (40%), Gaps = 46/483 (9%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ F + ++Y+++L + A ++ + I D Y I +L +
Sbjct: 260 EENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRS 319
Query: 136 QKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
KA+ + +++ E I P N+L+ +G I A ++F+EMS + + + +
Sbjct: 320 AKAYLLLKKMRK--EMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYN 377
Query: 194 VFIWKFCENAKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD 250
I C + L +LD + R N + G+ +++G CK ++ E A ++L+
Sbjct: 378 ALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGT-----LLNGLCKHEKFELAKRLLE 432
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
+R+ + IAY ++ + G + E ++ K GV P Y I G
Sbjct: 433 RMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFC--- 489
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
R+ K E+I M G V S
Sbjct: 490 RVGNIKSAKEIICR-------------------------------MYRSGLVLNKIIYST 518
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L N C+ E ++VY V++ N + D + NV+VS LC G+L EA + M R G
Sbjct: 519 LIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIG 578
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L P+ Y+ ++ A +D M G + TY L+ + G + A
Sbjct: 579 LVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAK 638
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
+ + + A D+ Y +LL C+ NL A +F+K V ++V+ S+ + L
Sbjct: 639 KFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGL 698
Query: 551 CRR 553
CR+
Sbjct: 699 CRK 701
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 104/201 (51%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M E G VPT+ T + L CK+ + +E+ + D+ +YNV + LCT+ R
Sbjct: 259 MEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHR 318
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+AY ++++M+++ + P+ YN+L+ +E + A +++++M S N TYN
Sbjct: 319 SAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNA 378
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI VG+ E ALRL +M G+ + TY +LL GLC+ + A + + +D
Sbjct: 379 LIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVND 438
Query: 536 VMLARSILSTFMISLCRRVLI 556
+++ + + LC+ ++
Sbjct: 439 MVVGHIAYTVLIDGLCKNGML 459
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/407 (20%), Positives = 163/407 (40%), Gaps = 2/407 (0%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
Y ++ L +G N +A N + + + + N+LLA G + A+ +FD+M
Sbjct: 621 YGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMV 680
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
V + + + C K + + R ++ V+ ++ G K
Sbjct: 681 QNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGR-GTLFPNHVMYTCLVDGLSKAGH 739
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+ AF +E+ + PD +A+ + + G + + R GV P Y
Sbjct: 740 PKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNI 799
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKG 360
+ G ++ + L ++ D ++LI G S P + MI +G
Sbjct: 800 LLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEG 859
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
+ T + L + K + ++ ++ F D ++YN + + L RE+
Sbjct: 860 TLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFREST 919
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
V+ EM G+ P + Y +L+ CR ++ A KL D+M A G + + ++
Sbjct: 920 VVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGL 979
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
G+ E A+ + +ML + P T+T+L+ C++ + A ++
Sbjct: 980 LHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL 1026
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 92/177 (51%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P++ T + + ++ K +++ + +++ +S ++ ++N++++ LC G L++A
Sbjct: 193 GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 252
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
++++M+ G P + YN+L+ C++ + A +L D M G ++ TYN+ I
Sbjct: 253 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDN 312
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
A L M ++ ++P+ TY +L+ G +E + A +VFN+ D+
Sbjct: 313 LCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDL 369
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%)
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K D VE ++++ + + + N++++ + R + + +EM KG+ P+V
Sbjct: 175 KEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVG 234
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
+N L+ C E L+ A L QM +G + TYN L++ + + G + A+ L M
Sbjct: 235 TFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYM 294
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ KG+ D TY ++ LC A+ + K
Sbjct: 295 ICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKK 328
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 85/420 (20%), Positives = 175/420 (41%), Gaps = 43/420 (10%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSV-LKQVKVNKITL--DSSVYRFIIPSLIQGK 133
Q N +Y S+L L R+ A+ +V L + + TL + +Y ++ L +
Sbjct: 681 QNNVLPDSYTYSSLLTGLC--RKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAG 738
Query: 134 NTQKAFSVFNEV--KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+ + AF F E+ K C D N+++ + G + A F M GV +
Sbjct: 739 HPKAAFYFFEEMMKKGTCPD--TVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLAT 796
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRE--------NSMING-----------SVIAVLI 232
+ + + F + L + LS+ + + +S+I G ++ +I
Sbjct: 797 YNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMI 856
Query: 233 IHG--------------FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+ G + + ++ +AF +++ + PD Y + +
Sbjct: 857 MEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFR 916
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
E VVL + + GV P+ Y I G+ I A +L + + + F + +A++
Sbjct: 917 ESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMV 976
Query: 339 -GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
G + A++ + M+ +PT++T + L C+ K E +++ V+
Sbjct: 977 RGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLK 1036
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D+ +YNV++ +C +G A+ + +EM+ + L P+++ Y L++A + L +KL
Sbjct: 1037 LDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKL 1096
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 64/149 (42%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+++++ G + A + + G P V N ++ + ++ L+ +M
Sbjct: 166 FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 225
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G N+ T+NILI+ G ++ A L M E G P TY +LL C++ +
Sbjct: 226 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 285
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLC 551
AA E+ + + + + F+ +LC
Sbjct: 286 AAIELIDYMICKGIEADVCTYNVFIDNLC 314
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 115/481 (23%), Positives = 202/481 (41%), Gaps = 21/481 (4%)
Query: 63 HHSLALGFFNWASQQPNFTHSPLSYHSILKS--LSLSRQINAIDSVLKQVKVNKITLDS- 119
H LAL F W +QP L++ L + L +R ++ S+L+ + I S
Sbjct: 840 HGRLALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSI 899
Query: 120 ---------------SVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
SV+ +I ++ A F V CN +LA +
Sbjct: 900 FGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASM 959
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
D + +F EMS +G+ + F + I C L + ++L ++ EN +
Sbjct: 960 VKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQME--ENGFVP 1017
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
V +++ +CK R + A +++D + + + D Y + + + ++L
Sbjct: 1018 TIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLL 1077
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
KK RK ++P Y I G + E +I A ++ + + + NALIG +
Sbjct: 1078 KKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHV 1137
Query: 345 -DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
D A+ + M G T L LCK K + + + + ND +Y
Sbjct: 1138 GDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAY 1197
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
V++ LC +G L EA ++ M + G++PDV Y+SL+ CR ++ AK++ +M+
Sbjct: 1198 TVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYR 1257
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
SG N Y+ LI F + G + A++++ M G D T L+ LC++ L
Sbjct: 1258 SGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGE 1317
Query: 524 A 524
A
Sbjct: 1318 A 1318
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 205/484 (42%), Gaps = 32/484 (6%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y S++ I + ++ ++ + + L+ +Y +I + Q N +A V+
Sbjct: 1230 ITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVY-- 1287
Query: 145 VKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
NC G + CN L++ L DG + A K MS G+ ++I + I +
Sbjct: 1288 AVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSI 1347
Query: 203 AKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
S D++ K + GS ++ G CKG + EA K L+ L
Sbjct: 1348 GDPLNAFSFFDDMIKCGQHPSFFTYGS-----LLKGLCKGGNLVEAKKFLNRLHYIPGAV 1402
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL- 318
D + Y + E G++ E + K + V P + Y + GL + + A L
Sbjct: 1403 DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLF 1462
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
G + G + + L+ +S P++A FF M++KG P + + + +
Sbjct: 1463 GTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSR 1522
Query: 378 RNKSDELVEVYKVLSANDYFTDME---------SYNVMVSFLCTSGRLREAYGVIQEMKR 428
R + ++ AND+F+ M +YN+++ L + M R
Sbjct: 1523 RGQ---------MMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMR 1573
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
+G+ PD ++SL+ + + KL +M G + T+NILI+K+SE G++
Sbjct: 1574 EGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRK 1633
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
A L + M GV PD TY + GL +++ + + V ++ + + V+ + T +
Sbjct: 1634 AFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLIN 1693
Query: 549 SLCR 552
+CR
Sbjct: 1694 GMCR 1697
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 109/483 (22%), Positives = 195/483 (40%), Gaps = 46/483 (9%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ F + ++Y+++L + A ++ + I D Y I +L +
Sbjct: 1011 EENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRS 1070
Query: 136 QKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
KA+ + +++ E I P N+L+ +G I A ++F+EMS + + + +
Sbjct: 1071 AKAYLLLKKMRK--EMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYN 1128
Query: 194 VFIWKFCENAKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD 250
I C + L +LD + R N + G+ +++G CK ++ E A ++L+
Sbjct: 1129 ALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGT-----LLNGLCKHEKFELAKRLLE 1183
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
+R+ + IAY ++ + G + E ++ K GV P Y I G
Sbjct: 1184 RMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFC--- 1240
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
R+ K E+I M G V S
Sbjct: 1241 RVGNIKSAKEIICR-------------------------------MYRSGLVLNKIIYST 1269
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L N C+ E ++VY V++ N + D + NV+VS LC G+L EA + M R G
Sbjct: 1270 LIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIG 1329
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L P+ Y+ ++ A +D M G + TY L+ + G + A
Sbjct: 1330 LVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAK 1389
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
+ + + A D+ Y +LL C+ NL A +F+K V ++V+ S+ + L
Sbjct: 1390 KFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGL 1449
Query: 551 CRR 553
CR+
Sbjct: 1450 CRK 1452
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 104/201 (51%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M E G VPT+ T + L CK+ + +E+ + D+ +YNV + LCT+ R
Sbjct: 1010 MEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHR 1069
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+AY ++++M+++ + P+ YN+L+ +E + A +++++M S N TYN
Sbjct: 1070 SAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNA 1129
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI VG+ E ALRL +M G+ + TY +LL GLC+ + A + + +D
Sbjct: 1130 LIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVND 1189
Query: 536 VMLARSILSTFMISLCRRVLI 556
+++ + + LC+ ++
Sbjct: 1190 MVVGHIAYTVLIDGLCKNGML 1210
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/407 (20%), Positives = 163/407 (40%), Gaps = 2/407 (0%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
Y ++ L +G N +A N + + + + N+LLA G + A+ +FD+M
Sbjct: 1372 YGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMV 1431
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
V + + + C K + + R ++ V+ ++ G K
Sbjct: 1432 QNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGR-GTLFPNHVMYTCLVDGLSKAGH 1490
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+ AF +E+ + PD +A+ + + G + + R GV P Y
Sbjct: 1491 PKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNI 1550
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKG 360
+ G ++ + L ++ D ++LI G S P + MI +G
Sbjct: 1551 LLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEG 1610
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
+ T + L + K + ++ ++ F D ++YN + + L RE+
Sbjct: 1611 TLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFREST 1670
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
V+ EM G+ P + Y +L+ CR ++ A KL D+M A G + + ++
Sbjct: 1671 VVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGL 1730
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
G+ E A+ + +ML + P T+T+L+ C++ + A ++
Sbjct: 1731 LHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL 1777
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 92/177 (51%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P++ T + + ++ K +++ + +++ +S ++ ++N++++ LC G L++A
Sbjct: 944 GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 1003
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
++++M+ G P + YN+L+ C++ + A +L D M G ++ TYN+ I
Sbjct: 1004 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDN 1063
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
A L M ++ ++P+ TY +L+ G +E + A +VFN+ D+
Sbjct: 1064 LCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDL 1120
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%)
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K D VE ++++ + + + N++++ + R + + +EM KG+ P+V
Sbjct: 926 KEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVG 985
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
+N L+ C E L+ A L QM +G + TYN L++ + + G + A+ L M
Sbjct: 986 TFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYM 1045
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ KG+ D TY ++ LC A+ + K
Sbjct: 1046 ICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKK 1079
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 107/228 (46%), Gaps = 1/228 (0%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I+ + + ++ +AF +++ + PD Y + + E VVL + +
Sbjct: 1620 ILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLEN 1679
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
GV P+ Y I G+ I A +L + + + F + +A++ G + A
Sbjct: 1680 GVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDA 1739
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
++ + M+ +PT++T + L C+ K E +++ V+ D+ +YNV++
Sbjct: 1740 MLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMG 1799
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
+C +G A+ + +EM+ + L P+++ Y L++A + L +KL
Sbjct: 1800 MCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKL 1847
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 64/149 (42%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+++++ G + A + + G P V N ++ + ++ L+ +M
Sbjct: 917 FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 976
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G N+ T+NILI+ G ++ A L M E G P TY +LL C++ +
Sbjct: 977 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 1036
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLC 551
AA E+ + + + + F+ +LC
Sbjct: 1037 AAIELIDYMICKGIEADVCTYNVFIDNLC 1065
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 172/398 (43%), Gaps = 35/398 (8%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRG-VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
N +L+VLA +AL ++ M HR V +T FGV C + + L++L +
Sbjct: 143 NVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRGMA 202
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+ + + +V+ +IH C V EA +L+E+ + C D + V +G
Sbjct: 203 R--HGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGR 260
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGL------------------------------ 306
V E ++ + G P Y + GL
Sbjct: 261 VREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGG 320
Query: 307 -IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPT 364
+ E ++ EA EL E + D + L+ + + SA+ M +KG P
Sbjct: 321 CLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPN 380
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
+ T + + + CK D+ + + +SA + + YN M+ LC GR+ EA G+IQ
Sbjct: 381 VVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQ 440
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
EM+ +G +PD+ YN+++ C + + A+ +++ + G N TYN +I G
Sbjct: 441 EMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDG 500
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
+ A+RL M+ G + D +Y L++ +C++ N+
Sbjct: 501 RWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVD 538
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/475 (21%), Positives = 206/475 (43%), Gaps = 9/475 (1%)
Query: 64 HSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
H+ AL + + + ++ ++L + N ++L+ + + D+ +Y+
Sbjct: 155 HADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQ 214
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR 183
+I +L +A ++ NE+ + ++ + G + A ++ D M +
Sbjct: 215 TVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTK 274
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G + +G + C + + +ML V + + N +I G ++
Sbjct: 275 GCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFN------TVIGGCLAEGKLA 328
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
EA ++ + + ++ C+PD Y I+ +G + +L++ K G AP Y +
Sbjct: 329 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVL 388
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFNFMIEKGR 361
+ + L E + + T++ N +I ++ D R A+ M +G
Sbjct: 389 HSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCK-DGRMDEAMGLIQEMRSQGC 447
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P + + + + +LC + +E +++ L + +YN ++ L GR ++A
Sbjct: 448 NPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVR 507
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+ +EM G DV YN L++A C++ + + L ++M G N +YNILIS+
Sbjct: 508 LAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELC 567
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+ + AL L ML +G+APD TY +L+ GLC+ + AA + K N +V
Sbjct: 568 KERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENV 622
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 183/403 (45%), Gaps = 20/403 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +L+ L RQ + ++L +V + L ++V I L +GK +A ++
Sbjct: 281 MTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTV---IGGCLAEGK-LAEATELYET 336
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + L+ L G I +A+++ EM +G + + + + + FC+N
Sbjct: 337 MGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGM 396
Query: 205 LGQVLSMLDEVRKRENSM----INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
++L+E+ + ++ NG +I+ CK R++EA ++ E+R + C PD
Sbjct: 397 WDDTRALLEEMSAKGLTLNSQGYNG------MIYALCKDGRMDEAMGLIQEMRSQGCNPD 450
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+Y + + E E + + + GV Y I L+ + R +A L +
Sbjct: 451 ICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAK 510
Query: 321 VIVSGKFTIDDDVLNALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
++ ++D N LI ++ ++D ++V M EKG P + + L LCK
Sbjct: 511 EMILHGCSLDVVSYNGLIKAMCKDGNVD--RSLVLLEEMAEKGIKPNNVSYNILISELCK 568
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ + +E+ K + D+ +YN +++ LC G + A +++++ + + PD+
Sbjct: 569 ERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIIT 628
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCS-GNLKTYNILISK 479
YN L+ C+ LL A L ++ A+ C G+ + IL K
Sbjct: 629 YNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPDK 671
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
++ V LC GR EA +++ M R G PD Y +++ A C + + A L ++M
Sbjct: 177 TFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 236
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
GC+ ++ T++ ++ +G + A RL M+ KG P TY LL+GLC+
Sbjct: 237 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 296
Query: 522 QAAFEVFNKSVNHDVMLARSILS 544
A + + +V+L +++
Sbjct: 297 DEARAMLGRVPELNVVLFNTVIG 319
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 1/152 (0%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF-YNSLMEACCREDLLRPAKKLWDQ 460
SYNV++S L + +A + + M + P +F + A CR A L
Sbjct: 141 SYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRG 200
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M GC + Y +I + G + A L + ML G A D T+ ++ G+C
Sbjct: 201 MARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGR 260
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++ A + ++ + M + LCR
Sbjct: 261 VREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 292
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 181/387 (46%), Gaps = 8/387 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L A+ + D M +G + + +GV + C+ ++L+++
Sbjct: 804 NTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME- 862
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + G +I II G CK K +++A + E+ + +P+ + Y + G
Sbjct: 863 -QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 921
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--N 335
+ +L + + P + I + E ++ EA++L + +V K +ID ++ +
Sbjct: 922 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV--KRSIDPSIVTYS 979
Query: 336 ALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+LI D A F FM+ K P + T + L K CK + +E +EV++ +S
Sbjct: 980 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 1039
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ +YN+++ L +G A + +EM G+ P++ YN+L++ C+ L A
Sbjct: 1040 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 1099
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+++ + S + TYNI+I + G++E LF N+ KGV PD Y +++ G
Sbjct: 1100 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 1159
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARS 541
C++ + + A +F K + D L S
Sbjct: 1160 FCRKGSKEEADALF-KEMKEDGTLPNS 1185
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 194/407 (47%), Gaps = 17/407 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ + D + + +M G+ F + I FC ++ LS+L ++ K
Sbjct: 192 NRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLK 251
Query: 218 ---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+ + GS +++GFC+ RV +A ++D++ KPD +AY + +
Sbjct: 252 LGYEPDRVTIGS-----LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 306
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
V + K+ + G+ P Y + GL R +A L ++ K T +
Sbjct: 307 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 366
Query: 335 NALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
+AL+ + V + A F M+ P + T S+L LC ++ DE +++ ++ +
Sbjct: 367 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 426
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
D+ SYN +++ C + R+ + + +EM ++GL + YN+L++ + +
Sbjct: 427 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 486
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A++ + QM G S ++ TYNIL+ + GE+E AL +F +M ++ + D TYT+++
Sbjct: 487 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 546
Query: 514 GLCQETNLQAAFEVFN----KSVNHDVMLARSILSTFMISLCRRVLI 556
G+C+ ++ A+ +F K + D++ +T M LC + L+
Sbjct: 547 GMCKTGKVEEAWSLFCSLSLKGLKPDIV----TYTTMMSGLCTKGLL 589
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 198/451 (43%), Gaps = 10/451 (2%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN +++++++ L L + + +++ ++ D Y ++ L + +T
Sbjct: 797 QPN----TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 852
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
AF++ N+++ + G I N+++ L ++D+AL +F EM +G+ + + + I
Sbjct: 853 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 912
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIR 255
C + +L ++ +R+ IN V +I F K ++ EA K+ DE+ R
Sbjct: 913 SCLCNYGRWSDASRLLSDMIERK---INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 969
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
P + Y + F + + E + + + P Y I G +R+ E
Sbjct: 970 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 1029
Query: 316 KELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
E+ + + N LI G + D A F M+ G P + T + L
Sbjct: 1030 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 1089
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK K ++ + V++ L + + +YN+M+ +C +G++ + + + + KG+ PD
Sbjct: 1090 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 1149
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V YN+++ CR+ A L+ +M G N YN LI G+ E + L
Sbjct: 1150 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 1209
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
M G A DA+T L+ + + L +F
Sbjct: 1210 EMRSCGFAGDAST-IGLVTNMLHDGRLDKSF 1239
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 178/396 (44%), Gaps = 7/396 (1%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK-- 217
LL+ +A D + + ++M + G+ + + + I FC ++L L++L ++ K
Sbjct: 701 LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 760
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E +++ S + ++G+C KR+ EA ++D++ + +P+ + + + L
Sbjct: 761 YEPNIVTLSSL----LNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 816
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E ++ + G P Y + GL A L + GK + N +
Sbjct: 817 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 876
Query: 338 IGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I + A+ F M KG P + T S+L LC + + + +
Sbjct: 877 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 936
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ +++ ++ G+L EA + EM ++ +DP + Y+SL+ C D L AK+
Sbjct: 937 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 996
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+++ M + C ++ TYN LI F + +E + +F M ++G+ + TY L++GL
Sbjct: 997 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 1056
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
Q + A E+F + V+ V +T + LC+
Sbjct: 1057 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 1092
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/446 (20%), Positives = 179/446 (40%), Gaps = 54/446 (12%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y S++ L L +I+ + + + D Y +I + K + +F E
Sbjct: 399 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 458
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ N+L+ G +D A + F +M G+ + + + C+N +
Sbjct: 459 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 518
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + L + ++++KRE + V +I G CK +VEEA+ + L ++ KPD + Y
Sbjct: 519 LEKALVIFEDMQKREMDL--DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 576
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ G + E E + K ++ G+ ND C + G++ +S
Sbjct: 577 TTMMSGLCTKGLLHEVEALYTKMKQEGLMK--ND--------------CTLSD-GDITLS 619
Query: 325 GKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ M+ G P+L L ++ +CK+ S L
Sbjct: 620 AEL-------------------------IKKMLSCGYAPSL--LKDIKSGVCKKALS--L 650
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+ + ++ DY + S N + +L +A + EM + P + ++ L+ A
Sbjct: 651 LRAFSGKTSYDYREKL-SRNGLSEL-----KLDDAVALFGEMVKSRPFPSIIEFSKLLSA 704
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
+ + L +QM G N TY+ILI+ F ++ AL + M++ G P+
Sbjct: 705 IAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPN 764
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNK 530
T +SLL G C + A + ++
Sbjct: 765 IVTLSSLLNGYCHSKRISEAVALVDQ 790
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 95/203 (46%), Gaps = 4/203 (1%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F+ M++ P++ + L + K K D ++ + K + D+ ++N++++
Sbjct: 172 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 231
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C ++ A ++ +M + G +PD SL+ CR + + A L D+M G
Sbjct: 232 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 291
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF--- 525
++ YN +I + + A F + KG+ P+ TYT+L+ GLC + A
Sbjct: 292 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 351
Query: 526 -EVFNKSVNHDVMLARSILSTFM 547
++ K + +V+ ++L F+
Sbjct: 352 SDMIKKKITPNVITYSALLDAFV 374
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%)
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+L +A + +M + P + +N L+ A + L +M G +L T+N
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
I+I+ F ++ AL + ML+ G PD T SL+ G C+ + A + +K V
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 285
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 168/355 (47%), Gaps = 9/355 (2%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+G+ I F L + +L+E++ N +V+ ++ G C RV EA +
Sbjct: 12 YGILIRGFSSAGDLDIAIQLLEEMKS--NGFEGNAVVHTTLMKGLCDAGRVVEALEHFRA 69
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ ++C PD + Y + G E + +L++ G AP T + I GL
Sbjct: 70 M-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGS 128
Query: 312 ICEA-KELGEVIVSGKFTID---DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
+A + L +VI G D + ++ L +S++ S ++ +I KG PT+
Sbjct: 129 EEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVL--GVVIAKGFTPTVLM 186
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ + CK D ++ +V+ ++ ++ ++++ LC + R+ EA ++++M
Sbjct: 187 FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV 246
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
G P+V Y++++ C++ + A +L+ M C N+ T+NILI + IE
Sbjct: 247 TGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIE 306
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
A +L+H M E G APD TY SL++GLC+ + AF++F V A ++
Sbjct: 307 EARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAV 361
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/487 (21%), Positives = 205/487 (42%), Gaps = 41/487 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y +++ S + ++ +L+++K N ++ V+ ++ L +A F
Sbjct: 10 FTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRA 69
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ +C P++ +L+ L G D A M EM RG T+ F I C+
Sbjct: 70 MAKDC---APDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKF 126
Query: 203 AKLGQVLSMLDEVRKRE------------------------NSMINGSVIAV-------- 230
Q +L++V +R S + G VIA
Sbjct: 127 GSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLM 186
Query: 231 --LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
L+I+GFCK K ++ A+K+L+ + + C P+ + I+ V E + +L+K
Sbjct: 187 FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV 246
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPR 347
G +P Y I GL + ++ +A EL +++ + N LI G +
Sbjct: 247 TGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIE 306
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY-FTDMESYNVM 406
A ++ M E G P + T ++L LCK + DE ++++ + + + +Y+ +
Sbjct: 307 EARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTL 366
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
GR+ +A + + KG PD++ Y SL+ C+ +L ++M + G
Sbjct: 367 FHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGF 426
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ T + ++ E E A++LF +M +G DA Y ++EG+ + + A
Sbjct: 427 PPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALA 486
Query: 527 VFNKSVN 533
V + ++
Sbjct: 487 VLEQVID 493
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/527 (18%), Positives = 219/527 (41%), Gaps = 88/527 (16%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++ +L + + + +L+++ D+ + +I L + + ++AF V +
Sbjct: 79 MTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLED 138
Query: 145 V--------KFNCEDIGPEICNS---------LLAVLASDGY------------------ 169
V E I +CN +L V+ + G+
Sbjct: 139 VIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAK 198
Query: 170 -IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS-- 226
+D+A K+ + M +G + F + I C+ ++G+ +L++ M+ G
Sbjct: 199 DLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK-------MVTGGCS 251
Query: 227 ---VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
V +I+G CK +V++A+++ + R C P+ + + I+ + + E +
Sbjct: 252 PNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQL 311
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI--GSV 341
+ R+ G AP Y I GL ++ EA +L + I + + V + + G
Sbjct: 312 YHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYA 371
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR----------------------- 378
+ A F+ +++KG P L+T ++L CK
Sbjct: 372 ALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVN 431
Query: 379 ------------NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
N ++ ++++ ++A D YN++V + + + +A V++++
Sbjct: 432 TLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQV 491
Query: 427 ---KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+ + +P S ++L+E+ C+ AK+L +M G + + +YN L+S S +
Sbjct: 492 IDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRL 551
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ A ++F M+ G AP+ +T ++ LC + A+E+ +
Sbjct: 552 QRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQR 598
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 183/436 (41%), Gaps = 12/436 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++ ++ L + ++ +L+++ + + Y +I L + A+ +F
Sbjct: 220 FTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQL 279
Query: 145 V-KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ + NC P + N L+ L I+ A +++ M G I + I C+
Sbjct: 280 MERRNCP---PNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCK 336
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ ++ + + + + S N + L HG+ R+ +A ++ L + PD
Sbjct: 337 SFQVDEAFQLFQTIPESGVSAANAVTYSTLF-HGYAALGRMADACRIFSMLVDKGFSPDL 395
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
Y + E+ E ++++ G PR N + GL A +L +
Sbjct: 396 ATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDS 455
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRV---PTLSTLSNLSKNLCK 377
+ + T D + N ++ G + A+ +I+K P+ S + L ++LC+
Sbjct: 456 MAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQ 515
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
++D+ ++ +S + + SYN ++S L R EA V + M G P++S
Sbjct: 516 VGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEIST 575
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
N ++ C + A +L +M GC +++T N LI + + G + A +L M
Sbjct: 576 VNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMT 635
Query: 498 EKGVAPDATTYTSLLE 513
E G+ P+ TT+ LLE
Sbjct: 636 EAGLEPNDTTH-DLLE 650
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y +++ ++G L A +++EMK G + + + +LM+ C + A + + M
Sbjct: 11 TYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM 70
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
A C+ ++ TY L+ + G+ + A + M+ +G APD T+++L++GLC+ +
Sbjct: 71 -AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSE 129
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ AF V + + + + T + LC +
Sbjct: 130 EQAFRVLEDVIQRGMGNSDAAFETIIQRLCNK 161
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 96/215 (44%), Gaps = 2/215 (0%)
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G S+ D AI M G + L K LC + E +E ++ + A D
Sbjct: 18 GFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAP 76
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D+ +Y +V LC +G+ EA G+++EM +G PD +++L++ C+ A ++
Sbjct: 77 DVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVL 136
Query: 459 DQMFASGCSGNLKTYNILISKF-SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ + G + + +I + ++ +E A ++ ++ KG P + ++ G C+
Sbjct: 137 EDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCK 196
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+L +A+++ + + + + LC+
Sbjct: 197 AKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCK 231
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
C N TY ILI FS G+++ A++L M G +A +T+L++GLC + A
Sbjct: 5 CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64
Query: 526 EVFN---KSVNHDVM 537
E F K DVM
Sbjct: 65 EHFRAMAKDCAPDVM 79
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 127/501 (25%), Positives = 209/501 (41%), Gaps = 49/501 (9%)
Query: 75 SQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN 134
S QP+ ++ +L+ L S Q+ +L ++K D ++Y +I + K+
Sbjct: 37 SCQPD----AFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKD 92
Query: 135 TQKAFSVFNE-VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
+AF E VK +C N + + ++ D A+K+ DEM +G + +
Sbjct: 93 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRD-AVKLLDEMRDKGCSPNIYTYN 151
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRE--------NSMING-------------------- 225
V + CE KL + ML+E+ R NS I G
Sbjct: 152 VIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT 211
Query: 226 --SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
V +I+G CK ++ A ++LD + R C PD + Y + + F G V +
Sbjct: 212 PDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGL 271
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
L KLG P Y + L I +A+++ + FT D NA I +
Sbjct: 272 LDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCK 331
Query: 344 IDP-RSAIVFFNFMIEKGRVPTLSTLSNLS----------KNLCKRNKSDELVEVY-KVL 391
+ + A F+ M+E+G P S+ S L LCK + DE ++ KVL
Sbjct: 332 AERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVL 391
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
D+ YNVM+ C ++ +A + ++M K +V +N L+ C +D L
Sbjct: 392 DEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRL 450
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A+ + M G + TY L+ + G+ AL LF ++ G PD TY++L
Sbjct: 451 SDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSAL 510
Query: 512 LEGLCQETNLQAAFEVFNKSV 532
+ GL E + A+ +F K V
Sbjct: 511 ITGLVHENMAEEAYLLFTKLV 531
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 187/437 (42%), Gaps = 38/437 (8%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFD 178
Y ++ L + KA +VF E + +C+ P+ LL L ++ A K+
Sbjct: 10 YNKLLLQLTREHRHDKASAVFQEMIDKSCQ---PDAFTFAILLRGLCRSNQLEKARKLLG 66
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
M G + I + + GQ L E+ K N + V I+ G CK
Sbjct: 67 RMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVK--NHCLPTVVTYTNIVDGLCK 124
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+R +A K+LDE+R + C P+ Y ++ E + E + +L++ G P
Sbjct: 125 AERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVT 184
Query: 299 YREFILGLIVERRICEAKE-LGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMI 357
Y FI GL R+ EA++ L + V+ V+N L S D SA + M
Sbjct: 185 YNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGL---CKSGDLDSASRMLDHMS 241
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+G P + T S+L CK + + + + + +M +YN ++ L G +
Sbjct: 242 NRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIG 301
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+A ++ EM+R+G PDV YN+ ++ C+ + ++ AK ++D+M GC+ N +Y++LI
Sbjct: 302 KAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLI 361
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
D YT LL+GLC+ A +F+K ++ +
Sbjct: 362 V-------------------------DILLYTVLLDGLCKGGRFDEACALFSKVLDEKIC 396
Query: 538 LARSILSTFMI-SLCRR 553
M+ S C+R
Sbjct: 397 EPDVFFYNVMLDSHCKR 413
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%)
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
Y ++ +YN ++ L R +A V QEM K PD + L+ CR + L A+
Sbjct: 3 YEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKAR 62
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
KL +M GC + YN LIS +S+ + A + M++ P TYT++++GL
Sbjct: 63 KLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGL 122
Query: 516 CQETNLQAAFEVFNK 530
C+ + A ++ ++
Sbjct: 123 CKAERTRDAVKLLDE 137
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 85/186 (45%)
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T + L L + ++ D+ V++ + D ++ +++ LC S +L +A ++ M
Sbjct: 9 TYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRM 68
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
K G PD + YN+L+ + A K +M + C + TY ++ +
Sbjct: 69 KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERT 128
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
A++L M +KG +P+ TY ++EGLC+E L A ++ + ++F
Sbjct: 129 RDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSF 188
Query: 547 MISLCR 552
+ LC+
Sbjct: 189 IKGLCK 194
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 127/325 (39%), Gaps = 34/325 (10%)
Query: 54 RVINPYLLTHHSLALGFFNWASQQ---------------PNFTHSPLSYHSILKSLSLSR 98
R P ++T+ SL GF + PN ++Y+S+L +L
Sbjct: 243 RGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNM----VAYNSLLGALHRLG 298
Query: 99 QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCED------ 151
I + +L +++ T D Y I L + + +KA +VF+ V+ C
Sbjct: 299 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 358
Query: 152 ---IGPEICNSLLAVLASDGYIDNALKMFDE-MSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
+ + LL L G D A +F + + + E + V + C+ ++ +
Sbjct: 359 MLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDK 418
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
L + ++ ++ + V +++HG C R+ +A +L + PDF+ Y +
Sbjct: 419 ALQIHKQMLEKNCCNV---VTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTL 475
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
+ G + ++ K G P Y I GL+ E EA L +V ++
Sbjct: 476 VDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRW 535
Query: 328 TIDDDVLNALIGSVSSID-PRSAIV 351
DD L L + ++ PR A V
Sbjct: 536 VPDDKTLGLLHRKLKLLNKPRKAEV 560
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%)
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
G + +V YN L+ RE A ++ +M C + T+ IL+ ++E A
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
+L M E G PD Y +L+ G + + AF+ + V + + + +
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 550 LCR 552
LC+
Sbjct: 122 LCK 124
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 218/481 (45%), Gaps = 23/481 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
L++ +++ L ++ ++L ++ N + D Y + + + +T A ++ +
Sbjct: 183 LTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRK 242
Query: 145 VKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ I P I ++++ L DG ++ +F EM +G+ + + + I FC +
Sbjct: 243 ME-EISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCIS 301
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ +L E+ +R+ I+ +V+ +I+ F K + EA ++ DE+ R P+
Sbjct: 302 GRWSAAQRLLQEMLERK---ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 358
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
I Y + + F + E + G +P + I G +RI + EL
Sbjct: 359 ITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE 418
Query: 322 IVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ + N LI + D +A+ MI G P + T + L LC K
Sbjct: 419 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 478
Query: 381 SDELVEVYKV-------LSANDYFTDME----SYNVMVSFLCTSGRLREAYGVIQEMKRK 429
+ +E++K L A+ F +E +YN+++ L G+ EA + +EM +
Sbjct: 479 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR 538
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
G+ PD Y+S+++ C++ L A +++ M + S N+ T+N LI+ + + G ++
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 598
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK----SVNHDVMLARSILST 545
L LF M +G+ DA Y +L+ G + N+ A ++F + V D + R++L+
Sbjct: 599 LELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 658
Query: 546 F 546
F
Sbjct: 659 F 659
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 197/460 (42%), Gaps = 60/460 (13%)
Query: 111 KVNKITLDSSVYRF--IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLAS 166
K+ K+ L V F ++ L +A +F+++ C P++ +L+ L
Sbjct: 141 KLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---CR---PDVLTFTTLMNGLCR 194
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE--NSMIN 224
+G + A+ + D M G++ I +G F+ C K+G +S L+ +RK E + +
Sbjct: 195 EGRVVEAVALLDRMVENGLQPDQITYGTFVDGMC---KMGDTVSALNLLRKMEEISHIKP 251
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
VI II G CK R ++ + E++ + P+ + Y + F + G + +L
Sbjct: 252 NVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLL 311
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
++ + ++P Y I + E + EA EL
Sbjct: 312 QEMLERKISPNVVTYNALINAFVKEGKFFEAAEL-------------------------- 345
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
++ M+ +G +P T +++ CK+++ D +++ +++ D+ ++
Sbjct: 346 --------YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFT 397
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
++ C + R+ + ++ EM R+GL + YN+L+ C L A L QM +S
Sbjct: 398 TLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS 457
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE-----------KGVAPDATTYTSLLE 513
G ++ T N L+ + G+++ AL +F M + GV PD TY L+
Sbjct: 458 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 517
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
GL E A E++ + + ++ S+ + LC++
Sbjct: 518 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 557
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 169/396 (42%), Gaps = 43/396 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ + D + ++ +M + + F + I FC +KL LS ++ K
Sbjct: 85 NKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTK 144
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ V ++HG C RV EA + ++ C+PD + + + G V
Sbjct: 145 L--GLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRV 198
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E +L + + G+ P Y F+ G+ ++G+ + + LN L
Sbjct: 199 VEAVALLDRMVENGLQPDQITYGTFVDGMC---------KMGDTVSA---------LNLL 240
Query: 338 --IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
+ +S I P +V ++ +I+ LCK + + ++ +
Sbjct: 241 RKMEEISHIKPN--VVIYSAIID---------------GLCKDGRHSDSHNLFIEMQDKG 283
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
F ++ +YN M+ C SGR A ++QEM + + P+V YN+L+ A +E A
Sbjct: 284 IFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAA 343
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L+D+M G N TYN +I F + ++ A +F+ M KG +PD T+T+L++G
Sbjct: 344 ELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGY 403
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
C + E+ ++ ++ +T + C
Sbjct: 404 CGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 439
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 154/360 (42%), Gaps = 12/360 (3%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
AL F +++ G+ + F + C + ++ + L + ++ + + + +
Sbjct: 135 ALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPD------VLTFTTL 188
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG- 291
++G C+ RV EA +LD + +PD I Y + MG +L+K ++
Sbjct: 189 MNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH 248
Query: 292 VAPRTNDYREFILGLIVERRICEAKELG-EVIVSGKFTIDDDVLNALIGSVSSIDPR--S 348
+ P Y I GL + R ++ L E+ G F + N +IG I R +
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFP-NIVTYNCMIGGFC-ISGRWSA 306
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A M+E+ P + T + L K K E E+Y + + +YN M+
Sbjct: 307 AQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMID 366
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C RL A + M KG PDV + +L++ C + +L +M G
Sbjct: 367 GFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVA 426
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N TYN LI F VG++ AL L M+ GV PD T +LL+GLC L+ A E+F
Sbjct: 427 NTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 486
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 160/379 (42%), Gaps = 49/379 (12%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ +G A +++DEM RG+ +TI + I FC+ +L M +
Sbjct: 327 NALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMAT 386
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ S +I G+C KR+++ ++L E+ R + + Y + F L+G +
Sbjct: 387 KGCS--PDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDL 444
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID------- 330
+ ++ GV P + GL ++ +A E+ + + K +D
Sbjct: 445 NAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG 504
Query: 331 --DDVL--NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
DVL N LI G ++ A + M +G VP T S++ LCK+++ DE
Sbjct: 505 VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 564
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
+++ + + + ++ ++N +++ C +GR+ + + EM R+G+ D Y +
Sbjct: 565 QMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT----- 619
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
LI F +VG I GAL +F M+ GV PD
Sbjct: 620 ------------------------------LIYGFRKVGNINGALDIFQEMISSGVYPDT 649
Query: 506 TTYTSLLEGLCQETNLQAA 524
T ++L G + L+ A
Sbjct: 650 ITIRNMLTGFWSKEELERA 668
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 39/204 (19%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F+ M+ +P++ + L + + + D ++ +Y+ + D+ S+ +++
Sbjct: 65 AIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 124
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C+ +L A ++ + GL PDV + +L+ C
Sbjct: 125 CFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLC---------------------- 162
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
L + SE AL LFH + PD T+T+L+ GLC+E + A +
Sbjct: 163 -------LDHRVSE------ALDLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALL 205
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
++ V + + + TF+ +C+
Sbjct: 206 DRMVENGLQPDQITYGTFVDGMCK 229
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 197/472 (41%), Gaps = 73/472 (15%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSV 106
+SPSLV + L +LAL FF WA +Q F +S SYH++++SL +Q N I ++
Sbjct: 3 VSPSLVFEALKK-LSNAGALALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVIWNL 61
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLAS 166
+ +K K L+ + I + + ++A F +++ I N LL L
Sbjct: 62 VTDMK-QKGLLNKETFALISRRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLCK 120
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
++ A +FD+M+ RG + + + + + L +++ + +E+ ++
Sbjct: 121 SRQVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEM--KDEGFEPDV 178
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
V ++I+ CK +R ++A ++ E+ + CKP
Sbjct: 179 VTYGILINAHCKSRRYDDAIELFHEMEAKNCKP--------------------------- 211
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP 346
+P Y I GL E+R+ EA E E+ + F + NA++G+
Sbjct: 212 ------SPHI--YCTLINGLGAEKRLSEALEFFELSKASGFVPEAPTYNAVVGA------ 257
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
C + D++ + +Y+++
Sbjct: 258 ----------------------------YCWSERMDDVQRTIDEMRKGGVGPSARTYDII 289
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ L +G+ + AY V Q+M +G P VS Y ++ C ED + A K+WDQM A G
Sbjct: 290 LHHLIRAGKTKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGI 349
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ ++ LI+ +++ A F ML+ G+ P A +++L + L E
Sbjct: 350 LPVMHMFSTLINSLCHESKLDEACMYFQEMLDVGIRPPAQLFSNLKQNLLDE 401
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/385 (20%), Positives = 161/385 (41%), Gaps = 7/385 (1%)
Query: 151 DIGPEICNSLLAVLASDGYIDNALKMFD-EMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
++ P + L L++ G + AL F +G ++ST + I + + +
Sbjct: 2 EVSPSLVFEALKKLSNAGAL--ALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVIW 59
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+++ +++++ ++N A LI + + ++V+EA ++ K + + +
Sbjct: 60 NLVTDMKQK--GLLNKETFA-LISRRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLD 116
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
V ++V K K G Y + G E+ + E+ + F
Sbjct: 117 TLCKSRQVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEP 176
Query: 330 DDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
D LI + S AI F+ M K P+ L L + E +E +
Sbjct: 177 DVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEALEFF 236
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
++ A+ + + +YN +V C S R+ + I EM++ G+ P Y+ ++ R
Sbjct: 237 ELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRA 296
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
+ A ++ +M GC ++ TY I++ F ++ A++++ M KG+ P +
Sbjct: 297 GKTKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMF 356
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVN 533
++L+ LC E+ L A F + ++
Sbjct: 357 STLINSLCHESKLDEACMYFQEMLD 381
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
+N M ++G P + T L CK + D+ +E++ + A + Y +++ L
Sbjct: 166 YNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGA 225
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
RL EA + K G P+ YN+++ A C + + ++ D+M G + +T
Sbjct: 226 EKRLSEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSART 285
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
Y+I++ G+ + A +F M +G P +TY ++ C E + A +V+++
Sbjct: 286 YDIILHHLIRAGKTKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMK 345
Query: 533 NHDVMLARSILSTFMISLC 551
++ + ST + SLC
Sbjct: 346 AKGILPVMHMFSTLINSLC 364
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 218/481 (45%), Gaps = 23/481 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
L++ +++ L ++ ++L ++ N + D Y + + + +T A ++ +
Sbjct: 183 LTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRK 242
Query: 145 VKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ I P I ++++ L DG ++ +F EM +G+ + + + I FC +
Sbjct: 243 ME-EISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCIS 301
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ +L E+ +R+ I+ +V+ +I+ F K + EA ++ DE+ R P+
Sbjct: 302 GRWSAAQRLLQEMLERK---ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 358
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
I Y + + F + E + G +P + I G +RI + EL
Sbjct: 359 ITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE 418
Query: 322 IVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ + N LI + D +A+ MI G P + T + L LC K
Sbjct: 419 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 478
Query: 381 SDELVEVYKV-------LSANDYFTDME----SYNVMVSFLCTSGRLREAYGVIQEMKRK 429
+ +E++K L A+ F +E +YN+++ L G+ EA + +EM +
Sbjct: 479 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR 538
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
G+ PD Y+S+++ C++ L A +++ M + S N+ T+N LI+ + + G ++
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 598
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK----SVNHDVMLARSILST 545
L LF M +G+ DA Y +L+ G + N+ A ++F + V D + R++L+
Sbjct: 599 LELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 658
Query: 546 F 546
F
Sbjct: 659 F 659
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 197/460 (42%), Gaps = 60/460 (13%)
Query: 111 KVNKITLDSSVYRF--IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLAS 166
K+ K+ L V F ++ L +A +F+++ C P++ +L+ L
Sbjct: 141 KLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---CR---PDVLTFTTLMNGLCR 194
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE--NSMIN 224
+G + A+ + D M G++ I +G F+ C K+G +S L+ +RK E + +
Sbjct: 195 EGRVVEAVALLDRMVENGLQPDQITYGTFVDGMC---KMGDTVSALNLLRKMEEISHIKP 251
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
VI II G CK R ++ + E++ + P+ + Y + F + G + +L
Sbjct: 252 NVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLL 311
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
++ + ++P Y I + E + EA EL
Sbjct: 312 QEMLERKISPNVVTYNALINAFVKEGKFFEAAEL-------------------------- 345
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
++ M+ +G +P T +++ CK+++ D +++ +++ D+ ++
Sbjct: 346 --------YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFT 397
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
++ C + R+ + ++ EM R+GL + YN+L+ C L A L QM +S
Sbjct: 398 TLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS 457
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE-----------KGVAPDATTYTSLLE 513
G ++ T N L+ + G+++ AL +F M + GV PD TY L+
Sbjct: 458 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 517
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
GL E A E++ + + ++ S+ + LC++
Sbjct: 518 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 557
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 169/396 (42%), Gaps = 43/396 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ + D + ++ +M + + F + I FC +KL LS ++ K
Sbjct: 85 NKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTK 144
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ V ++HG C RV EA + ++ C+PD + + + G V
Sbjct: 145 L--GLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRV 198
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E +L + + G+ P Y F+ G+ ++G+ + + LN L
Sbjct: 199 VEAVALLDRMVENGLQPDQITYGTFVDGMC---------KMGDTVSA---------LNLL 240
Query: 338 --IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
+ +S I P +V ++ +I+ LCK + + ++ +
Sbjct: 241 RKMEEISHIKPN--VVIYSAIID---------------GLCKDGRHSDSHNLFIEMQDKG 283
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
F ++ +YN M+ C SGR A ++QEM + + P+V YN+L+ A +E A
Sbjct: 284 IFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAA 343
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L+D+M G N TYN +I F + ++ A +F+ M KG +PD T+T+L++G
Sbjct: 344 ELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGY 403
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
C + E+ ++ ++ +T + C
Sbjct: 404 CGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 439
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 154/360 (42%), Gaps = 12/360 (3%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
AL F +++ G+ + F + C + ++ + L + ++ + + + +
Sbjct: 135 ALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPD------VLTFTTL 188
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG- 291
++G C+ RV EA +LD + +PD I Y + MG +L+K ++
Sbjct: 189 MNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH 248
Query: 292 VAPRTNDYREFILGLIVERRICEAKELG-EVIVSGKFTIDDDVLNALIGSVSSIDPR--S 348
+ P Y I GL + R ++ L E+ G F + N +IG I R +
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFP-NIVTYNCMIGGFC-ISGRWSA 306
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A M+E+ P + T + L K K E E+Y + + +YN M+
Sbjct: 307 AQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMID 366
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C RL A + M KG PDV + +L++ C + +L +M G
Sbjct: 367 GFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVA 426
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N TYN LI F VG++ AL L M+ GV PD T +LL+GLC L+ A E+F
Sbjct: 427 NTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 486
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 160/379 (42%), Gaps = 49/379 (12%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ +G A +++DEM RG+ +TI + I FC+ +L M +
Sbjct: 327 NALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMAT 386
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ S +I G+C KR+++ ++L E+ R + + Y + F L+G +
Sbjct: 387 KGCS--PDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDL 444
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID------- 330
+ ++ GV P + GL ++ +A E+ + + K +D
Sbjct: 445 NAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG 504
Query: 331 --DDVL--NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
DVL N LI G ++ A + M +G VP T S++ LCK+++ DE
Sbjct: 505 VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 564
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
+++ + + + ++ ++N +++ C +GR+ + + EM R+G+ D Y +
Sbjct: 565 QMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT----- 619
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
LI F +VG I GAL +F M+ GV PD
Sbjct: 620 ------------------------------LIYGFRKVGNINGALDIFQEMISSGVYPDT 649
Query: 506 TTYTSLLEGLCQETNLQAA 524
T ++L G + L+ A
Sbjct: 650 ITIRNMLTGFWSKEELERA 668
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 39/204 (19%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F+ M+ +P++ + L + + + D ++ +Y+ + D+ S+ +++
Sbjct: 65 AIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 124
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C+ +L A ++ + GL PDV + +L+ C
Sbjct: 125 CFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLC---------------------- 162
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
L + SE AL LFH + PD T+T+L+ GLC+E + A +
Sbjct: 163 -------LDHRVSE------ALDLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALL 205
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
++ V + + + TF+ +C+
Sbjct: 206 DRMVENGLQPDQITYGTFVDGMCK 229
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/511 (22%), Positives = 217/511 (42%), Gaps = 58/511 (11%)
Query: 57 NPYLLTHHSLALGFFNWA--SQQPNFTHSPL---------SYHSILKSLSLSRQINAIDS 105
+P +++++++ GFF S+ N H + +Y S + +L +R ++ +
Sbjct: 224 SPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAEL 283
Query: 106 VLKQVKVNKITLDSSVYRFIIPS---LIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSL 160
VL+Q+ N D Y +I L Q K T F + P+I CNS
Sbjct: 284 VLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTR-----RGLMPDIFTCNSY 338
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE- 219
++ L G A + FD M+ +G + + + V + + A G V+ ML+ E
Sbjct: 339 MSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGY---AAEGYVVDMLNLFNSMEG 395
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
N ++ + ++I + K ++EA + +++ R PD Y V F MG + +
Sbjct: 396 NGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLAD 455
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+ +G+ P T Y I G + + +AKEL ++S
Sbjct: 456 AMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGI------------ 503
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
PR VFFN +I +LCK + E +++ ++ D
Sbjct: 504 ------PRPNTVFFNSII---------------NSLCKEGRVVEAQDIFDLVIHIGERPD 542
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ ++N ++ G++ +A+GV+ M G++PDV Y++L++ CR + L+
Sbjct: 543 VITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFR 602
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M + G TY I++ G GA ++ H M+E G D +T +L GLC+
Sbjct: 603 EMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNN 662
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
A +F K +V +I++T + ++
Sbjct: 663 CDDEAIALFKKLGAMNVKFNIAIINTMIDAM 693
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 170/400 (42%), Gaps = 38/400 (9%)
Query: 156 ICNSLLAVLASDGYIDNALK-MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
+ N LL L D+A+ + M GVE TI + + CE+++ + L +L
Sbjct: 156 VANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHT 215
Query: 215 VRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+ K+ C P+ ++Y V F
Sbjct: 216 MVKKSGG-----------------------------------CSPNVVSYNTVIHGFFRE 240
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G V + + + + GV P Y +I L R + +A+ + ++S F D
Sbjct: 241 GEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTY 300
Query: 335 NALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N +I S + + F M +G +P + T ++ +LCK KS E E + ++A
Sbjct: 301 NCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAA 360
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ D+ +Y+V++ G + + + M+ G+ D S YN L++A + ++
Sbjct: 361 KGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDE 420
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A ++ QM G + TY +I+ FS +G + A+ F+ M+ G+ PD Y SL++
Sbjct: 421 AMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQ 480
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI-SLCR 552
G C NL A E+ ++ ++ + ++ +I SLC+
Sbjct: 481 GFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCK 520
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 103/496 (20%), Positives = 189/496 (38%), Gaps = 45/496 (9%)
Query: 98 RQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC 157
R +A++ +L ++ + D+ Y ++ SL + +Q+A + + + P +
Sbjct: 169 RSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVV 228
Query: 158 --NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
N+++ +G + A +F EM +GV + + +I C+ + + +L ++
Sbjct: 229 SYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQM 288
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
N V +IHG+ + +E + E+ R PD G
Sbjct: 289 I--SNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHG 346
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E G P Y + G E + + L + D V N
Sbjct: 347 KSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYN 406
Query: 336 ALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
LI G +D A++ F M E+G +P T + + + + ++ + +
Sbjct: 407 ILIDAYGKRGMMD--EAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMI 464
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD-PDVSFYNSLMEACCRE--- 448
A D YN ++ C G L +A +I EM +G+ P+ F+NS++ + C+E
Sbjct: 465 AMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRV 524
Query: 449 -------DLL-----RP--------------------AKKLWDQMFASGCSGNLKTYNIL 476
DL+ RP A + D M + G ++ TY+ L
Sbjct: 525 VEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSAL 584
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+ + G I+ L LF ML KGV P TY +L GL + A ++ ++ +
Sbjct: 585 LDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGT 644
Query: 537 MLARSILSTFMISLCR 552
+ S + LCR
Sbjct: 645 TMDISTCGIILGGLCR 660
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 188/438 (42%), Gaps = 12/438 (2%)
Query: 82 HSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
H P ++Y +L + + + ++ ++ N I D SVY +I + + +A
Sbjct: 363 HKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAM 422
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+F +++ +++A + G + +A+ F++M G++ TI + I F
Sbjct: 423 LIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGF 482
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD-ELRIRECK 258
C + L + ++ E+ R N +V II+ CK RV EA + D + I E +
Sbjct: 483 CMHGNLVKAKELISEMMSRGIPRPN-TVFFNSIINSLCKEGRVVEAQDIFDLVIHIGE-R 540
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA--- 315
PD I + + + + L+G + + VL +G+ P Y + G RI +
Sbjct: 541 PDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLIL 600
Query: 316 -KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+E+ V +L+ L ++ + + MIE G +ST +
Sbjct: 601 FREMLSKGVKPTTITYGIILHGLFNDGRTVGAKK---MCHEMIESGTTMDISTCGIILGG 657
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LC+ N DE + ++K L A + ++ N M+ + + EA + + GL P+
Sbjct: 658 LCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPN 717
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
S Y ++ +E + A ++ M SGC+ + + N +I E GEI A
Sbjct: 718 ASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLS 777
Query: 495 NMLEKGVAPDATTYTSLL 512
+ K ++ +A+T + +L
Sbjct: 778 KVDGKTISLEASTASLML 795
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 116/278 (41%), Gaps = 38/278 (13%)
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV--SGKFTIDDDVLNALI- 338
V+L + +LGV P T Y + L + R A +L +V SG + + N +I
Sbjct: 176 VLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIH 235
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G + A F+ M+++G VP + T S+ LCK D+ V + + +N +
Sbjct: 236 GFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEP 295
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D +YN M+ G+ +E G+ +EM R+GL PD+ NS M + C+
Sbjct: 296 DKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKH---------- 345
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
G+ + A F +M KG PD TY+ LL G E
Sbjct: 346 -------------------------GKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAE 380
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+ +FN + ++ S+ + + + +R ++
Sbjct: 381 GYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMM 418
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 36/191 (18%)
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
P F ++ G + + L K LC +SD+ V V
Sbjct: 135 PTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV------------------ 176
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF--A 463
++ M G++PD Y++++++ C + + A L M +
Sbjct: 177 ----------------LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKS 220
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
GCS N+ +YN +I F GE+ A LFH M+++GV PD TY+S ++ LC+ +
Sbjct: 221 GGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDK 280
Query: 524 AFEVFNKSVNH 534
A V + +++
Sbjct: 281 AELVLRQMISN 291
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR- 491
P V YN LM+ CCR L+ + +G ++ NIL+ + A+
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
L H M E GV PD +Y+++L+ LC+++ Q A ++ + V
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMV 217
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/466 (24%), Positives = 204/466 (43%), Gaps = 35/466 (7%)
Query: 54 RVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVN 113
R INP ++T+ +L GFF + Q YH D + + V+VN
Sbjct: 443 RGINPNVVTYGTLIDGFFKFQGQDAALE----VYH---------------DMLCEGVEVN 483
Query: 114 KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNA 173
K +DS ++ L Q ++A ++F + + + +L+ L G + A
Sbjct: 484 KFIVDS-----LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTA 538
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR----KRENSMINGSVIA 229
K E+ R + + + VFI C K + S+L E+R K + S N +++
Sbjct: 539 FKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVS 598
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
C+ +A K+L E+++ KP+ I Y + G+V + + +L +
Sbjct: 599 ------HCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRS 348
G +P + +R + RR+ ++ E +++ D V N L+ + R
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A V M+ G P T + L CK + D Y + + ++ ++N ++
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L + GR+ EA V+ EM++ GL+P+ Y+ L+ ++ A +L+ +M G
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVP 832
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+ TYN LIS F++ G + A LF +M ++GV P + TY L+ G
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/521 (21%), Positives = 205/521 (39%), Gaps = 74/521 (14%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+ Y++++ + Q++A VL +K + + + Y I + K ++AF ++
Sbjct: 205 VGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEG 264
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ N + ++L+A L DG A +F EM G + + + I + +
Sbjct: 265 MVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGR 324
Query: 205 LGQVLSMLDEVRKR----------------------------------ENSMINGSVIAV 230
++LS+L E+ R +N +NG V
Sbjct: 325 GKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTV 384
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
LI CK V+EA +VL E+ + P+ + + V F G + + + ++
Sbjct: 385 LI-DALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKER 443
Query: 291 GVAPRTNDYREFILGL-----------IVERRICEAKELGEVIV---------SGKFTID 330
G+ P Y I G + +CE E+ + IV +GK
Sbjct: 444 GINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEA 503
Query: 331 DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
+ GS S+D + + + + G +PT + L RN
Sbjct: 504 MALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAF---KFGQELMDRN----------- 549
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
D YNV ++ LC G+ +EA ++ EM+ GL PD S YN+++ + CR+
Sbjct: 550 -----MLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGE 604
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
A KL +M S NL TYN L++ G +E A L + M+ G +P + T+
Sbjct: 605 TAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRR 664
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+L+ Q L ++ +N + ++ +T + LC
Sbjct: 665 VLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/485 (21%), Positives = 206/485 (42%), Gaps = 38/485 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++ L + + + L+ + ++L+ Y +I +L + N +A V E
Sbjct: 345 VTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLE 404
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF--- 199
++ + I P + +S++ G +D A + M RG+ + + +G I F
Sbjct: 405 MEE--KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462
Query: 200 --------------CENAKLGQVL--SMLDEVR---KRENSMI-----NGSVIAV----- 230
CE ++ + + S+++ +R K E +M +GS +++
Sbjct: 463 QGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522
Query: 231 -LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+I G K + AFK EL R PD + Y + ++G E + +L + R
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRN 582
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRS 348
+G+ P + Y I+ + +A +L + + N L+ G +
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A N M+ G P+ T + + + + D ++++++ + D+ YN ++
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G R+A V++EM G+ PD +N+L+ C+ L A + QM S
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISP 762
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ T+N L+ VG I A + M + G+ P+ TY L+ G +++N A ++
Sbjct: 763 NIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLY 822
Query: 529 NKSVN 533
+ V
Sbjct: 823 CEMVG 827
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 173/400 (43%), Gaps = 19/400 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LLA L+ + A + EM RGV F + + C N ++ ++ D
Sbjct: 107 NILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD---- 159
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
R + VI +I G+C+ A V D + + D + Y + F G
Sbjct: 160 RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQ 219
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
V VL ++ GV P Y FI+ + + EA +L E +V +D L+A
Sbjct: 220 VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279
Query: 337 LIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
L+ + D R A F M + G VP T L +L K + EL+ + + +
Sbjct: 280 LVAGLCR-DGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSR 338
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF----YNSLMEACCREDL 450
D+ +Y ++ +L G+ E +++ R L ++S Y L++A C+
Sbjct: 339 GVVMDLVTYTALMDWLGKQGKTDE----VKDTLRFALSDNLSLNGVTYTVLIDALCKAHN 394
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ A+++ +M S N+ T++ +I+ F + G ++ A M E+G+ P+ TY +
Sbjct: 395 VDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT 454
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
L++G + AA EV++ + V + + I+ + + L
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGL 494
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 155/374 (41%), Gaps = 36/374 (9%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+A G AL + D M+ +G+ +G+ + FC ++ +LD + K
Sbjct: 173 NTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLD-MMK 231
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
N + I++ +C+ K VEEAF + + + D + + G
Sbjct: 232 EAGVDPNVATYTPFIVY-YCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRF 290
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E + ++ K+G P Y I L R KEL
Sbjct: 291 SEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGR---GKEL------------------- 328
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
+ M+ +G V L T + L L K+ K+DE+ + + +++
Sbjct: 329 ------------LSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS 376
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
+ +Y V++ LC + + EA V+ EM+ K + P+V ++S++ + LL A +
Sbjct: 377 LNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEY 436
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
M G + N+ TY LI F + + AL ++H+ML +GV + SL+ GL Q
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQ 496
Query: 518 ETNLQAAFEVFNKS 531
++ A +F +
Sbjct: 497 NGKIEEAMALFKDA 510
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP-DVSFYNSLMEACCREDLLRPAKKL 457
D + N +++ LC +G++ A + + G+ DV +N+L+ CR A +
Sbjct: 134 DGVTVNTLLAGLCRNGQVDAAAALAD--RGGGIHALDVIGWNTLIAGYCRVGDTPAALSV 191
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
D+M A G ++ YN L++ F G+++ A + M E GV P+ TYT + C+
Sbjct: 192 ADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCR 251
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++ AF+++ V + V+L LS + LCR
Sbjct: 252 TKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCR 286
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 131/322 (40%), Gaps = 10/322 (3%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+++ C+ + + A +L R +P +AY I+ + VL + K G
Sbjct: 79 LLYSHCRLRLLRPAIALL-----RSSRPTTVAYNIL---LAALSDHAHAPAVLAEMCKRG 130
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAI 350
V + GL ++ A L + G +D N LI + D +A+
Sbjct: 131 VPFDGVTVNTLLAGLCRNGQVDAAAALADR-GGGIHALDVIGWNTLIAGYCRVGDTPAAL 189
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ M +G + + L C+ + D V ++ ++ +Y + +
Sbjct: 190 SVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYY 249
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C + + EA+ + + M R G+ DV ++L+ CR+ A L+ +M G N
Sbjct: 250 CRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNH 309
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TY LI ++ G + L L M+ +GV D TYT+L++ L ++ +
Sbjct: 310 VTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRF 369
Query: 531 SVNHDVMLARSILSTFMISLCR 552
+++ ++ L + + +LC+
Sbjct: 370 ALSDNLSLNGVTYTVLIDALCK 391
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
D + N+L+ + CR LLRPA L + + YNIL++ S+ L
Sbjct: 72 DPASLNALLYSHCRLRLLRPAIALLRSSRPTTVA-----YNILLAALSDHAHAPAVLA-- 124
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
M ++GV D T +LL GLC+ + AA + ++
Sbjct: 125 -EMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRG 161
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/482 (22%), Positives = 213/482 (44%), Gaps = 56/482 (11%)
Query: 83 SPLSYHSILKSL-SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSV 141
+ ++Y +I+ + ++A++ + K +V+ I + +Y II SL + A ++
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 142 FNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
F E++ + I P++ NS++ S G +A ++ EM R + + + I F
Sbjct: 278 FTEMQE--KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ K + + DE+ R +I ++ +I GFCK R++ A + + + C P
Sbjct: 336 VKEGKFFEAAELYDEMLPR--GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSP 393
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D + + + + + + +L + + G+ T Y I G
Sbjct: 394 DVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF------------- 440
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
L+G D +A+ MI G P + T + L LC
Sbjct: 441 ----------------CLVG-----DLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 479
Query: 380 KSDELVEVYKV-------LSANDYFTDME----SYNVMVSFLCTSGRLREAYGVIQEMKR 428
K + +E++K L A+ F +E +YN+++ L G+ EA + +EM
Sbjct: 480 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH 539
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
+G+ PD Y+S+++ C++ L A +++ M + S N+ T+N LI+ + + G ++
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDD 599
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH----DVMLARSILS 544
L LF M +G+ DA Y +L+ G + N+ A ++F + ++ D + R++L+
Sbjct: 600 GLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659
Query: 545 TF 546
F
Sbjct: 660 GF 661
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 158/382 (41%), Gaps = 37/382 (9%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D + ++ +M + + F + I FC +KL LS ++ K + V
Sbjct: 96 DLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKL--GLHPDVVTFT 153
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++HG C RV EA ++ C+P+ + + + G + E +L + +
Sbjct: 154 TLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED 213
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
G+ P Y G IV+ G D SA+
Sbjct: 214 GLQPTQITY-----GTIVD-----------------------------GMCKKGDTVSAL 239
Query: 351 VFFNFMIEKGRV-PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
M E + P + S + +LCK + + ++ + F D+ +YN M+
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
C+SGR +A ++QEM + + PDV YN+L+ A +E A +L+D+M G N
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 359
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
TYN +I F + ++ A +F+ M KG +PD T+T+L++G C + E+ +
Sbjct: 360 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 419
Query: 530 KSVNHDVMLARSILSTFMISLC 551
+ ++ +T + C
Sbjct: 420 EMPRRGLVANTVTYNTLIHGFC 441
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 174/409 (42%), Gaps = 50/409 (12%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
+L+ L +G I A+ + D M G++ + I +G + C K G +S L+ +RK
Sbjct: 188 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC---KKGDTVSALNLLRK 244
Query: 218 RE--NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E + +I VI II CK R +A + E++ + PD Y + F G
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG 304
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ E +L++ + ++P Y I + E + EA EL
Sbjct: 305 RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAEL----------------- 347
Query: 336 ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
++ M+ +G +P T +++ CK+++ D +++ +++
Sbjct: 348 -----------------YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG 390
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D+ ++ ++ C + R+ + ++ EM R+GL + YN+L+ C L A
Sbjct: 391 CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAAL 450
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE-----------KGVAPD 504
L QM +SG ++ T N L+ + G+++ AL +F M + GV PD
Sbjct: 451 DLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPD 510
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
TY L+ GL E A E++ + + ++ S+ + LC++
Sbjct: 511 VLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 85/205 (41%), Gaps = 35/205 (17%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F+ M+ +P++ L + + + D ++ +Y+ + D+ S+N+++
Sbjct: 63 AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C+ +L A ++ + GL PDV + +L+ C ED
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVED------------------- 163
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ SE AL FH M E P+ T+T+L+ GLC+E + A +
Sbjct: 164 ----------RVSE------ALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207
Query: 529 NKSVNHDVMLARSILSTFMISLCRR 553
++ + + + T + +C++
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKK 232
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 126/487 (25%), Positives = 203/487 (41%), Gaps = 70/487 (14%)
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLA 162
+DS LK+ + ++ ++ L++ TQ N+V FN +++
Sbjct: 244 LDSFLKEGRKDEASM-----------LLKEMETQGGGFSLNDVTFNV----------VIS 282
Query: 163 VLASDGYIDNALKMFDEM--SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
LA +G+++NA+K+ D M S + F+ + I E + + ++ E+ EN
Sbjct: 283 FLAREGHLENAVKLVDSMRLSKKASSFT---YNPLITALLERGFVRKAEALQMEM---EN 336
Query: 221 SMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
I +V+ IIHG K ++ E A E+R PD I Y + + G++ E
Sbjct: 337 EGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKE 396
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
+L R+ G+AP Y I G + EA+ L E +V D L+
Sbjct: 397 ALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMN 456
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
GS + A FF+ M+ KG P + + + ++ +V+ +
Sbjct: 457 GSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYP 516
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D +YNV++ LC +G L++A + +M GL PD Y L+ A C LLR A+KL
Sbjct: 517 DTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLL 576
Query: 459 DQMFASGCS----------------GNLK-------------------TYNILISKFSEV 483
+ M + G GNL TYN+LI
Sbjct: 577 NGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMT 636
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA----FEVFNKSVNHDVMLA 539
G A R FH MLE+G+AP+ TYT L++G C+E N A FE+ + D
Sbjct: 637 GRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTH 696
Query: 540 RSILSTF 546
++ F
Sbjct: 697 NALFKGF 703
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 101/466 (21%), Positives = 201/466 (43%), Gaps = 19/466 (4%)
Query: 75 SQQPNFTHSPLSYHSILKSLS----LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
+Q F+ + ++++ ++ L+ L + +DS+ K + T Y +I +L+
Sbjct: 265 TQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSFT-----YNPLITALL 319
Query: 131 QGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFS 188
+ +KA ++ +++ E I P + N+++ L + A F EM G+
Sbjct: 320 ERGFVRKAEAL--QMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPD 377
Query: 189 TIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFK 247
I + + ++C+ L + L +L ++R+ + + +V+ +I G+C+ + EA +
Sbjct: 378 VITYNSLLNRYCKAGNLKEALWLLGDLRR---AGLAPTVLTYNTLIDGYCRLGDLAEARR 434
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
+ +E+ + C PD Y I+ + + ++ + G+ P Y I +
Sbjct: 435 LKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAEL 494
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
A +L EV++ D N +I G + + + A M+ G P
Sbjct: 495 TLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCI 554
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T + L C+R E ++ + ++ + +Y ++V C G L AYG ++M
Sbjct: 555 TYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKM 614
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
G++P+ YN L+ A C A + + +M G + N TY +LI G
Sbjct: 615 LDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNW 674
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
A+RL+ M + G+ PD T+ +L +G E ++ A E V
Sbjct: 675 ADAIRLYFEMHQNGIPPDYCTHNALFKGF-DEGHMYHAIEYMENIV 719
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 170/416 (40%), Gaps = 18/416 (4%)
Query: 148 NCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
C + P++ CN +L VL D+ ++ EM VE + + + + F + +
Sbjct: 194 TCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRK 253
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ +L E+ + V ++I + +E A K++D +R+ + K Y
Sbjct: 254 DEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK-KASSFTYN 312
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV---- 321
+ G V + E + + G+ P Y I GL+ CE E +V
Sbjct: 313 PLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLK----CEQAEAAQVKFAE 368
Query: 322 IVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ + D N+L+ + + + A+ + G PT+ T + L C+
Sbjct: 369 MRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGD 428
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
E + + + F D+ +Y ++++ L A EM KGL PD YN+
Sbjct: 429 LAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNT 488
Query: 441 LMEACCREDLLRP---AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
+ C E L A +L + M G + TYN++I + G ++ A RL M+
Sbjct: 489 RI---CAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMV 545
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
G+ PD TYT L+ C+ L+ A ++ N V+ + + + + + CRR
Sbjct: 546 SDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRR 601
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 155/324 (47%), Gaps = 2/324 (0%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+++ C R+EEA V+ ++R C P+ + Y + F G + E V+ R+
Sbjct: 157 ILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREE 216
Query: 291 GVA-PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RS 348
G A P + + GL R+ A+++ + +V D N L+ +
Sbjct: 217 GNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHE 276
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
++ F+ M ++G VP + T ++L CK ++ V + + + ++ ++
Sbjct: 277 SLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID 336
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C G L +A ++EM++ G+ P V YN+L+ C+ + A++L +M A
Sbjct: 337 GFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP 396
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TY+ +IS + +VG ++ A +L ML+KGV PDA TY+SL+ GLC+E L A E+F
Sbjct: 397 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELF 456
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
+ V +T + C+
Sbjct: 457 ENMLQLGVQPDEFTYTTLIDGHCK 480
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 168/379 (44%), Gaps = 2/379 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L + G ++ A+ + +M G + + + + FC +L ++ +R+
Sbjct: 156 NILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMRE 215
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
N+ N V +++G CK R+E A KV DE+ PD ++Y + + +G +
Sbjct: 216 EGNAKPN-LVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCL 274
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E V + + G+ P + I + +A L + +++ AL
Sbjct: 275 HESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTAL 334
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G A++ M + G P++ + L CK + D E+ + + A
Sbjct: 335 IDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRV 394
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ +Y+ ++S C G L A+ + Q+M +KG+ PD Y+SL+ C E L A +
Sbjct: 395 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 454
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L++ M G + TY LI + G +E AL L M+ KGV PD TY+ L+ GL
Sbjct: 455 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 514
Query: 517 QETNLQAAFEVFNKSVNHD 535
+ + A + K + D
Sbjct: 515 KSARTKEAHRLLFKLYHED 533
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 180/393 (45%), Gaps = 23/393 (5%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NS++ L G ++ A K+FDEM G+ + + + +C+ L + L++ E+ +
Sbjct: 227 NSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ 286
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R ++ V +IH CK +E+A ++ ++R R + + + + + + F G +
Sbjct: 287 R--GLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFL 344
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ + +++ RK G+ P Y I G R+ A+EL + + + D + +
Sbjct: 345 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI 404
Query: 338 IGS---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
I V ++D SA M++KG +P T S+L + LC+ + ++ E+++ +
Sbjct: 405 ISGYCKVGNLD--SAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQL 462
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D +Y ++ C G + +A + EM RKG+ PDV Y+ L+ + + A
Sbjct: 463 GVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEA 522
Query: 455 KKL---------------WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+L +D + K+ L+ F G ++ A +++ +ML++
Sbjct: 523 HRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDR 582
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
D + Y+ L+ G C+ N++ A F+K +
Sbjct: 583 NWKLDGSVYSILIHGHCRGGNVRKALS-FHKQM 614
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 196/459 (42%), Gaps = 28/459 (6%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
+ +PN ++++S++ L + ++ V ++ + D Y ++ +
Sbjct: 217 GNAKPNL----VTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVG 272
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
++ +VF+E+ + P++ SL+ G ++ A+ + +M RG+ + +
Sbjct: 273 CLHESLAVFSEMTQ--RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 330
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLD 250
F I FC+ L L ++E+RK I SV+ +I+G+CK R++ A +++
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRK---CGIQPSVVCYNALINGYCKLGRMDLARELIR 387
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
E+ + KPD + Y + + +G++ + +K K GV P Y I GL E+
Sbjct: 388 EMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEK 447
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
R+ +A EL E ++ D+ LI G + A+ + MI KG +P + T S
Sbjct: 448 RLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS 507
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM------------VSFL---CTSG 414
L L K ++ E + L D D Y+ + V+ L C G
Sbjct: 508 VLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 567
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
++EA V Q M + D S Y+ L+ CR +R A QM SG S N +
Sbjct: 568 LMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTI 627
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
L+ E G + A ++L DA +L++
Sbjct: 628 SLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALID 666
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 113/220 (51%), Gaps = 1/220 (0%)
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
NA++ ++S SA F + M+ G P + T + L + LC R + +E V V +
Sbjct: 122 NAVLLALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGA 181
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG-LDPDVSFYNSLMEACCREDLLRP 453
+ +YN +V+ C +G L A V+ M+ +G P++ +NS++ C+ +
Sbjct: 182 GCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEG 241
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A+K++D+M G + ++ +YN L+S + +VG + +L +F M ++G+ PD T+TSL+
Sbjct: 242 ARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIH 301
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
C+ NL+ A + + + + + + C++
Sbjct: 302 ATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKK 341
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 137/566 (24%), Positives = 229/566 (40%), Gaps = 66/566 (11%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTH------ 82
KW P E+ L L L+ + LV V+ + ++ + FF WA ++ NF H
Sbjct: 44 KWGPDAEKALEVLKLK--VDHRLVREVLK--IDVEINVKIQFFKWAGKRRNFEHDLTTYM 99
Query: 83 ------------------------------SPLSYHSILKSLSLSRQINAIDSVLKQVKV 112
P ++K L ++ +N SV Q+K
Sbjct: 100 PLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEVVKILGKAKMVNKALSVFYQIKS 159
Query: 113 NKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYI 170
K +S Y +I L+Q + +K +++E+ N D P+ + L++ G
Sbjct: 160 RKCKPTASTYNSMILMLMQEGHHEKIHELYHEM-CNEGDCFPDTMTYSVLVSAFVKLGRD 218
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFI---WKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
D A+++FDEM G+ + + + +K + LG V M D+ G
Sbjct: 219 DYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGDEKALGLVQEMKDK----------GCA 268
Query: 228 IAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
V +I G K RVE+A+ V + CKPD + + F G + + +
Sbjct: 269 PTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKL 328
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERR-ICEAKELGEVIVSGKFTIDDDVLNALI-GSV 341
+ R L AP Y I L + EA E + + T + LI G
Sbjct: 329 FDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFC 388
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ A++ M EKG P + +L L K + + E++ L N +
Sbjct: 389 KTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSAR 448
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
Y VM+ L GR EA + EMK+ G +PDV YN+LM R ++ A M
Sbjct: 449 IYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTM 508
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+GC+ +L ++NI+++ + G E A +F M + + PDA +Y ++L L +
Sbjct: 509 EENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMF 568
Query: 522 QAAF----EVFNKSVNHDVMLARSIL 543
+ A E+ ++ +D + SIL
Sbjct: 569 EEAAKLMREMGSRGFEYDHITYSSIL 594
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/512 (21%), Positives = 220/512 (42%), Gaps = 60/512 (11%)
Query: 57 NPYLLTHHSLALGFFNWA--SQQPNFTHSPL---------SYHSILKSLSLSRQINAIDS 105
+P ++T++++ G F S+ N H + +Y SI+ +L +R ++ +
Sbjct: 224 SPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAEL 283
Query: 106 VLKQV-----KVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CN 158
VL+Q+ + NK+T + ++ + I Q K T F + + + P I CN
Sbjct: 284 VLRQMISNGFQPNKVTYNCMIHGYSISG--QWKETAGMFR-----EMTSQGLMPNIVTCN 336
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
S ++ L G A + FD M+ +G + + + + V + + +L++ + +
Sbjct: 337 SYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEG- 395
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
N ++ + ++I + K ++E + +++ + PD Y IV F MG +
Sbjct: 396 -NGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLA 454
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
+ + +G+ P Y I G + + +AKEL ++S
Sbjct: 455 DAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGI----------- 503
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
PR IVFFN +I +LCK + E +++ +
Sbjct: 504 -------PRPNIVFFNSII---------------NSLCKEGRVVEAHDIFDFVIHIGERP 541
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D+ ++N ++ G++ +A+GV+ M G++PDV YN+L++ CR + L+
Sbjct: 542 DVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILF 601
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M + G TY I++ G GA ++ H M+E G D +T +L GLC+
Sbjct: 602 GEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRN 661
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
A +F K +V +I++T + ++
Sbjct: 662 NCDDEAIAMFKKLGAMNVKFNIAIINTMIDAM 693
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 162/384 (42%), Gaps = 47/384 (12%)
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ M GVE TI + + CE+++ + L +L + K+ V +IHG
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
+ V +A + E+ + PD + Y + + ++ + E+VL++ G P
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNF 355
Y I G + SG++ + F
Sbjct: 297 KVTYNCMIHGYSI---------------SGQW-------------------KETAGMFRE 322
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M +G +P + T ++ +LCK KS E E + ++A + ++ +Y+V++ T G
Sbjct: 323 MTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGC 382
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ + M+ G+ D +N +++A + ++ ++ QM G + TY I
Sbjct: 383 FVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGI 442
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
+I+ FS +G + A+ F+ M+ G+ P+ Y SL++G C NL A E+ ++
Sbjct: 443 VIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSE----- 497
Query: 536 VMLARSI-------LSTFMISLCR 552
M++R I ++ + SLC+
Sbjct: 498 -MMSRGIPRPNIVFFNSIINSLCK 520
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 203/479 (42%), Gaps = 20/479 (4%)
Query: 85 LSYHSILKSLSL-SRQINAIDSVLKQVK-VNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
+SY++++K+L SR A+D + VK + + Y +I L + KA ++F
Sbjct: 191 ISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLF 250
Query: 143 NEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+E+ + + P++ S++ L +D A + +M G + + + + I +
Sbjct: 251 HEMMQ--QGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYS 308
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + + M E+ + ++ V + CK + +EA + D + + KP+
Sbjct: 309 ISGQWKETAGMFREMTSQ--GLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPN 366
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF--ILGLIVERRICEAKEL 318
+ Y ++ + G + + G+ D R F ++ +R + + L
Sbjct: 367 LVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVA---DQRVFNIVIDAYGKRGMMDETML 423
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+ + I D ++ + S R A+ FN MI G P +L + C
Sbjct: 424 IFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFC 483
Query: 377 KRN---KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
K+ ELV +++S ++ +N +++ LC GR+ EA+ + + G P
Sbjct: 484 MHGNLVKAKELVS--EMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERP 541
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
DV +NSL++ + A + D M ++G ++ +YN LI + G I+ L LF
Sbjct: 542 DVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILF 601
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
ML KGV P TY +L GL + A ++ ++ + + S + LCR
Sbjct: 602 GEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCR 660
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 101/445 (22%), Positives = 189/445 (42%), Gaps = 18/445 (4%)
Query: 75 SQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN 134
+PN + H +N +S+ + N I D V+ +I + +
Sbjct: 362 GHKPNLVTYSVLLHGYATEGCFVDMLNLFNSM----EGNGIVADQRVFNIVIDAYGKRGM 417
Query: 135 TQKAFSVFNEVKFNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
+ +F +++ + + P+ C ++A + G + +A+ F++M G++ I +
Sbjct: 418 MDETMLIFTQMQE--QGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVY 475
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD-E 251
I FC + L + ++ E+ R N V II+ CK RV EA + D
Sbjct: 476 HSLIQGFCMHGNLVKAKELVSEMMSRGIPRPN-IVFFNSIINSLCKEGRVVEAHDIFDFV 534
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ I E +PD I + + + + L+G + + VL G+ P Y I G R
Sbjct: 535 IHIGE-RPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGR 593
Query: 312 ICEAKEL-GEVIVSG--KFTIDDDV-LNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
I + L GE++ G TI + L+ L ++ + + MIE G +ST
Sbjct: 594 IDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKK---MCHEMIESGTTMDIST 650
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ LC+ N DE + ++K L A + ++ N M+ + + EA + +
Sbjct: 651 CGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSIS 710
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
GL P+ S Y +++ +E + A ++ M SGC+ + + N +I E GEI
Sbjct: 711 ATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIV 770
Query: 488 GALRLFHNMLEKGVAPDATTYTSLL 512
A + K ++ +A+T + L+
Sbjct: 771 KAGNYMFKVDGKRISLEASTVSLLM 795
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P V YN LM+ CCR L+ + +G ++ +IL+ + + L
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176
Query: 493 F-HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
H M E GV PD +Y ++++ LC+++ Q A ++ + V
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMV 217
>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
Length = 665
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/530 (21%), Positives = 222/530 (41%), Gaps = 16/530 (3%)
Query: 11 TRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGF 70
T S II R +W+ +E L GL L P +V +V+ L +A+ F
Sbjct: 59 TETSCVIIG---RALECGRWSESVELELE--GLHVELDPFVVNKVLRG--LLDSGMAVRF 111
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
+ WA +P F H+ + I+ L + + L +V+ + S+YR ++
Sbjct: 112 YWWAESRPGFYHNNFAIAYIISLLFVDDNFALLSEFLGRVRSQGVAFHRSLYRVLLAGYA 171
Query: 131 QGKNTQKAFSVFNE-VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
+ F+E V C + G + N + V+ + D K ++ +G +
Sbjct: 172 RAGKFDSVIETFDEMVTSGCREFGVDY-NRFIGVMIKNCCFDLVEKYYNMALAKGFCLTP 230
Query: 190 IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVL 249
+ +I C++ ++ V +L ++ K + +H C R+ +A +++
Sbjct: 231 FTYSRWITALCQSNRIELVEELLTDMDKF--GCFPDFWACNIYVHYLCGHNRLYDALQMV 288
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
+++ ++ PD + Y V E + ++ + G+ P I GL
Sbjct: 289 EKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKN 348
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLS 366
+++ EA EL +++ ++ + NALI SI+ V +FM G P +
Sbjct: 349 QKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTV--SFMQRNGCEPDVV 406
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T + L + C +D+ + + + + D SYN+++ LC + +L +A+ + +
Sbjct: 407 TYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDH 466
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
G D+ N L++A CR + A L+ +M G + TY ILI+ +G
Sbjct: 467 MEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYS 526
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
A LF ML + P+ Y +L LC+ + + A ++F + +V
Sbjct: 527 NLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEV 576
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/475 (20%), Positives = 197/475 (41%), Gaps = 41/475 (8%)
Query: 70 FFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSL 129
++N A + F +P +Y + +L S +I ++ +L + D + L
Sbjct: 217 YYNMALAK-GFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYL 275
Query: 130 IQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEF 187
A + K + GP++ ++++ L A+ +++EM RG++
Sbjct: 276 CGHNRLYDALQMVE--KMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKP 333
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
+ G I+ C+N K+ + + + + +N S+ LI GF + +E+A+K
Sbjct: 334 DVVACGALIFGLCKNQKVDEAFELASRMLTLD-IQLNVSIYNALI-SGFWRAGSIEKAYK 391
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
+ ++ C+PD + Y I+ + +G + E +++K GV P Y + GL
Sbjct: 392 TVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGL- 450
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
C+A +L + A F + +E G + +
Sbjct: 451 -----CKAHQLDK----------------------------AFAFVSDHMEVGGFCDIVS 477
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ L C+ K + + ++K + D +Y ++++ L G A + +M
Sbjct: 478 CNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQML 537
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
+ P+V+ YN ++ C+ + A+K++ QM S + T+N LI +
Sbjct: 538 NTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAV 597
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
AL LF M KGV PD T+ ++ GL E A+E++ + + ++L R +
Sbjct: 598 EALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYMMENGIILDRDV 652
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 216/492 (43%), Gaps = 51/492 (10%)
Query: 47 LSPSLVARVI-NPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDS 105
LSPS V+ ++ + L T +A+ FF WA +Q +TH+ Y S++ L+ + ++++ S
Sbjct: 106 LSPSFVSFILRSTELQTKPDVAIRFFTWAGKQKKYTHNLECYVSLIDVLATNGVLDSVKS 165
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLA 165
V + K ++ L +VY NSL+
Sbjct: 166 VFSKFK--EMGLIMTVYS---------------------------------SNSLIKSFG 190
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGF-----GVFIWKFCENAKLGQVLSMLDEVRKREN 220
+ G ++ L ++ M G+E S + G+ KF E+A+ +V ++ EN
Sbjct: 191 NLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAE--RVFEVM------EN 242
Query: 221 SMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
I V+ +I G+C+ + +AF+ L + +R PD I Y + + G
Sbjct: 243 GKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDS 302
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+ + + G+ + Y I GL + + E + E ++S + + ALI
Sbjct: 303 CLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALID 362
Query: 340 SVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
S + + A++ F M ++G P T + +LCK + DE +E + S
Sbjct: 363 SNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAV 422
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+ Y+ ++ L SGR+ EA + EM +KG PD YN+L++A + + A L
Sbjct: 423 NAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALS 482
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M GC + TY ILI+ E AL L+ M++KG+ P A + +L GLC
Sbjct: 483 KRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLS 542
Query: 519 TNLQAAFEVFNK 530
+ A ++ ++
Sbjct: 543 GKVARACKILDE 554
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 166/395 (42%), Gaps = 5/395 (1%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
SL+ VLA++G +D+ +F + G+ + I F LG V +L R+
Sbjct: 149 SLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSF---GNLGMVEEVLWVWRRM 205
Query: 219 ENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + I S+ + +++G K +E A +V + + + PD + Y + + + +G
Sbjct: 206 KENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKT 265
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ LK VAP Y I E L + I V + +
Sbjct: 266 RKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLV 325
Query: 338 IGSVSSIDPR-SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
IG + R F MI KG ++ + L + K E + ++K +
Sbjct: 326 IGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGL 385
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D +Y V+V+ LC SGRL EA ++ KG+ + FY+SL++ + + A++
Sbjct: 386 EPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAER 445
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
++ +M GC + YN LI ++ G+I+ AL L M G TYT L+ GL
Sbjct: 446 IFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLF 505
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+E + A +++ ++ + + LC
Sbjct: 506 REHRNEEALTLWDLMIDKGITPTAAAFRALSTGLC 540
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 85/208 (40%), Gaps = 1/208 (0%)
Query: 346 PRSAIVFFNFM-IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
P AI FF + +K L +L L D + V+ + S N
Sbjct: 124 PDVAIRFFTWAGKQKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSN 183
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
++ G + E V + MK G++P + YN L+ + A+++++ M
Sbjct: 184 SLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENG 243
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
++ TYN +I + EVG+ A M + VAPD TY +L++ E + +
Sbjct: 244 KIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSC 303
Query: 525 FEVFNKSVNHDVMLARSILSTFMISLCR 552
++++ + + + S + LC+
Sbjct: 304 LGLYHEMDEKGLEIPPHVYSLVIGGLCK 331
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 96/237 (40%), Gaps = 5/237 (2%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLA 165
+ K++K + D Y I+ SL + +A + +SL+ L
Sbjct: 376 LFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLG 435
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMING 225
G +D A ++F EM +G + + I AK G++ L ++ E +
Sbjct: 436 KSGRVDEAERIFYEMVKKGCPPDSYCYNALIDAL---AKCGKIDEALALSKRMEVDGCDQ 492
Query: 226 SVIA-VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+V ++I G + R EEA + D + + P A+R ++ L G V +L
Sbjct: 493 TVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKIL 552
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
+ +GV P T + + I L RI EA +L + IV I V LI ++
Sbjct: 553 DEMAPMGVIPETA-FDDMINILCKAGRIKEACKLADGIVDRGREIPGRVRTVLINAL 608
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/557 (22%), Positives = 241/557 (43%), Gaps = 48/557 (8%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
KW E+ + L L+ + LV +V++ + + FF WA ++ +F H +Y
Sbjct: 73 KWGSDAEKAIEVLKLK--VDHRLVHQVLD--IDVEIRAKIQFFKWAGKRQHFQHDSTTYM 128
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
++++ L S ++ + ++ + + ++ + + I+ L + K KA SVF ++K
Sbjct: 129 ALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVFYQIKGR 188
Query: 149 CEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG-VEFSTIGFGVFIWKFCENAKLGQ 207
+ + N+L+ +L +G+ + ++++E+ G TI + I F + +
Sbjct: 189 KCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDF 248
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
+ DE++ EN + I I+ + K +VE A ++++E++ + C P Y +
Sbjct: 249 AFRLFDEMK--ENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTEL 306
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
+ +G V + + K G P I L R+ +A +L + S +
Sbjct: 307 IKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQC 366
Query: 328 TIDDDVLNALIGSV--SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS---- 381
+ N +I ++ S A ++F M G P+ T + L CK N+
Sbjct: 367 APNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKAL 426
Query: 382 ----------------------DELVEVYKVLSANDYFTDMES---------YNVMVSFL 410
D L + +AN+ F +++ Y VM+
Sbjct: 427 LLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHF 486
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
GRL +A + EMK+ G PDV YN+LM R ++ A L M +GC+ ++
Sbjct: 487 GNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDI 546
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN- 529
K++NI+++ ++ G + A+ +F M E + PDA +Y ++L L + + A ++
Sbjct: 547 KSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMRE 606
Query: 530 ---KSVNHDVMLARSIL 543
K +D + SIL
Sbjct: 607 MKLKGFEYDSITYSSIL 623
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 188/426 (44%), Gaps = 20/426 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++ +R +L +++ I ++VY II L A + +
Sbjct: 34 ITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRD 93
Query: 145 VKFNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ +C P + L+ L I +A + ++M G + + + I FC+
Sbjct: 94 MQRHC---APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL 150
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+ + + + +++ ENS ++I G+CK +R ++ K+L E+ C+P+FI
Sbjct: 151 GNMDEAVVLFNQML--ENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 208
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE------AK 316
Y + + G + + + + P F L+++ C+ A
Sbjct: 209 TYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS-----HFTFNLMIDM-FCKVGQLDLAY 262
Query: 317 ELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
EL +++ D N +I G+ + A M E G P + T +++ L
Sbjct: 263 ELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGL 322
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
CK ++ DE EVY+VL YF D+ + + ++ LC S RL +A +++EM+R G PDV
Sbjct: 323 CKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDV 382
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y L+ C+ D L + + +M GC + TY+I+I K + + L
Sbjct: 383 VAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKT 442
Query: 496 MLEKGV 501
MLE+GV
Sbjct: 443 MLERGV 448
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 195/408 (47%), Gaps = 8/408 (1%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALK 175
DS Y +I + ++ Q+A+ + +E++ I P + N+++ L +G +D+AL
Sbjct: 32 DSITYSTLINGFCKARDFQQAYRLLDEMEK--RGIVPHNAVYNTIIKGLCDNGRVDSALV 89
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ +M R S I + + + C++A++ +L+++ E V +I+G
Sbjct: 90 HYRDM-QRHCAPSVITYTILVDALCKSARISDASLILEDMI--EAGCAPNVVTYNTLING 146
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
FCK ++EA + +++ C PD Y I+ + + + +L++ K G P
Sbjct: 147 FCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPN 206
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFN 354
Y + L+ + +A L ++++ N +I + A F
Sbjct: 207 FITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQ 266
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M ++G +P + T + + C+ N+ D+ ++ + ++ D+ +YN +VS LC +
Sbjct: 267 LMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKAS 326
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
++ EAY V + ++ G DV ++L++ C+ L A+KL +M +G + ++ Y
Sbjct: 327 QVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYT 386
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
ILI F + +++ +L F ML+KG P TY+ +++ LC+ ++
Sbjct: 387 ILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVR 434
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 162/396 (40%), Gaps = 37/396 (9%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN LL+ A +F +I + I FC+ Q +LDE+
Sbjct: 1 CNCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEME 60
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
KR ++ + + II G C RV+ A +++ R C P I Y I+ +
Sbjct: 61 KR--GIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCKSAR 117
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ + ++L+ + G AP Y I G C+ + E
Sbjct: 118 ISDASLILEDMIEAGCAPNVVTYNTLINGF------CKLGNMDE---------------- 155
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
A+V FN M+E P + T + L CK+ + + ++ + +
Sbjct: 156 ------------AVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGC 203
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ +YN ++ L SG+ +A+ + Q M R+ P +N +++ C+ L A +
Sbjct: 204 EPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYE 263
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L+ M GC ++ TYNI+IS I+ A +L M E G PD TY S++ GLC
Sbjct: 264 LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 323
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ + + A+EV+ N L ST + LC+
Sbjct: 324 KASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCK 359
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 192/434 (44%), Gaps = 14/434 (3%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSH 182
++ + ++ K Q+A+ +F C P+ ++L+ A ++ DEM
Sbjct: 4 LLSAFVRKKKAQEAYDLFK--NHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRV 242
RG+ + I C+N G+V S L R + + +++ CK R+
Sbjct: 62 RGIVPHNAVYNTIIKGLCDN---GRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARI 118
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
+A +L+++ C P+ + Y + F +G++ E V+ + + +P Y
Sbjct: 119 SDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNIL 178
Query: 303 ILGLIVERRICE-AKELGEVIVSG---KFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIE 358
I G + R + AK L E++ G F + ++++L+ S ID A M+
Sbjct: 179 IDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYID---AFNLAQMMLR 235
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
+ P+ T + + CK + D E++++++ D+ +YN+M+S C + R+ +
Sbjct: 236 RDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDD 295
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A +++ M G PDV YNS++ C+ + A ++++ + G ++ T + LI
Sbjct: 296 ARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLID 355
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+ ++ A +L M G APD YT L+ G C+ L + F++ ++ +
Sbjct: 356 GLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVP 415
Query: 539 ARSILSTFMISLCR 552
S + LC+
Sbjct: 416 TVITYSIVIDKLCK 429
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 148/302 (49%), Gaps = 2/302 (0%)
Query: 231 LIIHGFCKGKRVEEAFKVL-DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+++ C + EEA V+ D++R C P+ + Y + F G V E ++ R+
Sbjct: 159 ILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMRE 218
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRS 348
GV P + + GL R+ +A+++ + + T D N L+ G +
Sbjct: 219 GGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHE 278
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F M +KG VP + T ++L +C+ + V + + + ++ ++
Sbjct: 279 ALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALID 338
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C +G L +A ++EM+ + P V YN L+ C+ + A++L +M A G
Sbjct: 339 GFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKP 398
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TY+ ++S + ++G+ + A L ML+KGV PDA TY+SL+ GLC+E L A E+F
Sbjct: 399 DVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELF 458
Query: 529 NK 530
K
Sbjct: 459 EK 460
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 164/387 (42%), Gaps = 43/387 (11%)
Query: 158 NSLLAVLASDGYIDNALKMF-DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
N L+ L + G + AL + D+M G + + + + FC ++ ++ +R
Sbjct: 158 NILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMR 217
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E + V +++G CK R+E+A K+ DE+ PD ++Y + + G
Sbjct: 218 --EGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGC 275
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ E V + + GV P + I +C A L + A
Sbjct: 276 LHEALAVFAEMAQKGVVPDVVTFTSLI------HAMCRAGNLERAV-------------A 316
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
L+G M E+G T + L C+ D+ + K +
Sbjct: 317 LVGQ---------------MRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRI 361
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ YNV+++ C GR+ EA +I EM+ KG+ PDV Y++++ C+ A +
Sbjct: 362 QPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFE 421
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L +M G + TY+ LI E + A LF ML+ G+ PD TYT+L++G C
Sbjct: 422 LNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHC 481
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSIL 543
+E N+Q A + HD M+ + +L
Sbjct: 482 KEGNVQKALSL------HDEMIKKGVL 502
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 187/411 (45%), Gaps = 22/411 (5%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++ L G +++A KMFDEM+ G+ + + + +C+ L + L++ E+ +
Sbjct: 229 NTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQ 288
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ ++ V +IH C+ +E A ++ ++R R + + + + + F G +
Sbjct: 289 K--GVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFL 346
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ + +K+ R+ + P Y I G R+ EA+EL + + D + +
Sbjct: 347 DDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTI 406
Query: 338 IGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ I D SA M++KG VP T S+L + LC+ + + E+++ +
Sbjct: 407 LSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGL 466
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D +Y ++ C G +++A + EM +KG+ PDV Y+ L++ + + A++
Sbjct: 467 QPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQR 526
Query: 457 L---------------WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
L ++ + + K+ L+ FS G + A +++ +ML++
Sbjct: 527 LLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHW 586
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
D + Y+ L+ G C+ N+ A F+K + + S ST ISL R
Sbjct: 587 KLDGSVYSVLIHGHCRGGNIMKALS-FHKQL---LRCGFSPNSTSTISLVR 633
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 109/219 (49%), Gaps = 1/219 (0%)
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY-KVLSA 393
NA++ ++S SA M+ G P + T + L + LC R + +E + V +
Sbjct: 124 NAVLLALSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRG 183
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
++ +YN +V+ C +G + A ++ M+ G+ P + +N+++ C+ +
Sbjct: 184 AGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMED 243
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A+K++D+M G + + +YN L+S + + G + AL +F M +KGV PD T+TSL+
Sbjct: 244 ARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIH 303
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+C+ NL+ A + + + + + + CR
Sbjct: 304 AMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCR 342
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 126/300 (42%), Gaps = 41/300 (13%)
Query: 291 GVAPRTNDYREFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALIGS---VSSIDP 346
GVAP Y + L + EA +G+ + + N L+ + +D
Sbjct: 149 GVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDA 208
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+V M E G P+L T + + LCK + ++ +++ ++ D SYN +
Sbjct: 209 AERLV--GVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTL 266
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
VS C +G L EA V EM +KG+ PDV + SL+ A CR L A L QM G
Sbjct: 267 VSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGL 326
Query: 467 SGNLKT-----------------------------------YNILISKFSEVGEIEGALR 491
N T YN+LI+ + ++G ++ A
Sbjct: 327 RMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARE 386
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
L H M KG+ PD TY+++L G C+ + +AFE+ K + V+ S+ + LC
Sbjct: 387 LIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLC 446
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/449 (20%), Positives = 181/449 (40%), Gaps = 59/449 (13%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S +++++++ L + ++ + ++ +T D Y ++ + +A +VF
Sbjct: 224 SLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVF 283
Query: 143 NEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E+ + + P++ SL+ + G ++ A+ + +M RG+ + F I FC
Sbjct: 284 AEMAQ--KGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFC 341
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
N L L + E+R+ I SV+ ++I+G+CK R++EA +++ E+ + KP
Sbjct: 342 RNGFLDDALLAMKEMRE---CRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKP 398
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D + Y + + +G + +K K GV P Y I GL ERR+ +A EL
Sbjct: 399 DVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELF 458
Query: 320 EVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
E ++ D+ LI G + + A+ + MI+KG +P + T S L L K
Sbjct: 459 EKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKS 518
Query: 379 NKSDELV--------------------------------------------------EVY 388
++ E +VY
Sbjct: 519 ARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVY 578
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+ + + D Y+V++ C G + +A +++ R G P+ + SL+ E
Sbjct: 579 QSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEE 638
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+ A + ++ + +T LI
Sbjct: 639 GMTVEADNVIQELLNCCSLADAETSKALI 667
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 181/408 (44%), Gaps = 29/408 (7%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L +LA D L + +M +G+ + + I FC KLG S + ++ K
Sbjct: 94 NRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFK 153
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+V +++G C RV EA +++D + + + PD I + L V
Sbjct: 154 LGYE--PNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRV 211
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVER--------------RICEAKELGEVIV 323
E ++ + G P +F G I+ R R E +++ +V
Sbjct: 212 SEAVDLIARMMANGCQPN-----QFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVV 266
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ ID+ + + A+ FF+ M KG + T ++L + C + D+
Sbjct: 267 TYTIIIDNLCKDGRLDD--------ALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDD 318
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
++ + + ++ +++ ++ L G+L EA + EM +G++P+ YNSL+
Sbjct: 319 GAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIY 378
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C + L A ++ D M + GC ++ TYNILI+ F + +++ +RLF M +G+
Sbjct: 379 GLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIA 438
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
D TY++L++G CQ L A +VF + V+ V + + LC
Sbjct: 439 DTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLC 486
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 167/376 (44%), Gaps = 7/376 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++ L + A+ + M G + + +G + + C K G S LD +RK
Sbjct: 199 NTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMC---KSGNTASALDLLRK 255
Query: 218 RENSMINGSVIA-VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E+ I V+ +II CK R+++A E+ + K + Y + F G
Sbjct: 256 MEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGR 315
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ +L+ + P + I L+ E ++ EAK+L +++ + N+
Sbjct: 316 WDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNS 375
Query: 337 LIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
LI + + D R A + M+ KG P + T + L CK + D+ + +++ +S
Sbjct: 376 LIYGLCN-DKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLR 434
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D +Y+ ++ C S +L A V QEM +G+ P + Y L++ C L A
Sbjct: 435 GMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEA 494
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+ DQM ++ YNI+I +++ A LF ++ KGV D +Y +L G
Sbjct: 495 LGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSG 554
Query: 515 LCQETNLQAAFEVFNK 530
LC+ ++L A +F K
Sbjct: 555 LCKRSSLSEADALFRK 570
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 202/455 (44%), Gaps = 19/455 (4%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSL-SRQINAID----SVLKQVKVNKITLDSSV 121
A+G +PN ++++++L L L R A++ VL Q + ITL++ V
Sbjct: 147 AMGKIFKLGYEPN----TVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIV 202
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
+ + A + N + N GP +L + G +AL + +M
Sbjct: 203 NGLCLKDRVSEAVDLIARMMANGCQPNQFTYGP-----ILNRMCKSGNTASALDLLRKME 257
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGK 240
HR ++ + + + I C++ +L LS E+ E I +V +I FC
Sbjct: 258 HRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEM---ETKGIKANVFTYNSLIGSFCSFG 314
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
R ++ ++L ++ R+ P+ + + + + G + E + + + G+ P T Y
Sbjct: 315 RWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYN 374
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK 359
I GL ++R+ EA ++ +++VS D N LI G + + F M +
Sbjct: 375 SLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLR 434
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G + T S L + C+ K +V++ + + + +Y +++ LC +G L EA
Sbjct: 435 GMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEA 494
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
G++ +M + ++ D+ YN ++ C + + A L+ + + G ++++YNI++S
Sbjct: 495 LGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSG 554
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+ + A LF M E G PD TY +L+
Sbjct: 555 LCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRA 589
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 190/425 (44%), Gaps = 17/425 (4%)
Query: 77 QPN-FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
QPN FT+ P IL + S + +L++++ KI Y II +L +
Sbjct: 227 QPNQFTYGP-----ILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRL 281
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
A S F+E++ NSL+ S G D+ ++ +M R + + + F
Sbjct: 282 DDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSAL 341
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
I + KL + + +E+ R + ++ +I+G C KR++EA +++D + +
Sbjct: 342 IDSLVKEGKLTEAKDLYNEMITR--GIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSK 399
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
C PD Y I+ F V + + +K G+ T Y I G R++ A
Sbjct: 400 GCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVA 459
Query: 316 KELGEVIVSGKFTIDDDVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
K++ + +VS + ++ I G + + A+ + M + + + +
Sbjct: 460 KKVFQEMVSQG--VHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIII 517
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
+C NK D+ ++ L + D++SYN+M+S LC L EA + ++MK G +
Sbjct: 518 HGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYE 577
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
PD YN+L+ A R + + + +L ++M G S + T I++ S GE++ +
Sbjct: 578 PDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSS-GELDKS--- 633
Query: 493 FHNML 497
F NML
Sbjct: 634 FLNML 638
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 98/242 (40%), Gaps = 39/242 (16%)
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
I A+ F M+ +PT+ + L L + + D ++ + K + D+ +
Sbjct: 69 IKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTL 128
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE--------------- 448
N+M++ C +L A+ + ++ + G +P+ +N+L+ C E
Sbjct: 129 NIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVL 188
Query: 449 --------------------DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
D + A L +M A+GC N TY ++++ + G
Sbjct: 189 SQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTAS 248
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN----KSVNHDVMLARSILS 544
AL L M + + P TYT +++ LC++ L A F+ K + +V S++
Sbjct: 249 ALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIG 308
Query: 545 TF 546
+F
Sbjct: 309 SF 310
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 157/377 (41%), Gaps = 10/377 (2%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+C L+ L G +A ++ G + + +C +L D
Sbjct: 72 LCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRL-------DAA 124
Query: 216 RKRENSMI--NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
R+ SM + +I G C RV +A +LD++ REC+P + Y ++ E
Sbjct: 125 RRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCK 184
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD-D 332
+ VL + R G P Y I G+ E R+ +A+++ + S F D
Sbjct: 185 SSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVS 244
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
L G ++ V F M+E VP T L + C+ + +EV +S
Sbjct: 245 YTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMS 304
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ + N++++ +C GR+ +A+ + M G PD Y ++++ CR
Sbjct: 305 EHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWE 364
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
AK+L ++M C N T+N I + G I+ A+ L M E G + TY +L+
Sbjct: 365 DAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALV 424
Query: 513 EGLCQETNLQAAFEVFN 529
G C + + +A E+FN
Sbjct: 425 NGFCVQGRVDSALELFN 441
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/479 (22%), Positives = 208/479 (43%), Gaps = 14/479 (2%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S ++Y +L+++ S VL +++ T + Y II + + A +
Sbjct: 171 SVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQIL 230
Query: 143 NEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
N + + P+ + ++L L + ++ +F EM + + F + + FC
Sbjct: 231 N--RLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFC 288
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + + +LD R E+ + + ++I+ CK RV++AF+ L+ + C PD
Sbjct: 289 RGGMVERAIEVLD--RMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPD 346
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
I+Y V + G + + +L + + P + FI L + I +A L E
Sbjct: 347 TISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIE 406
Query: 321 VIVSGKFTIDDDVLNALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ ++ NAL+ +D SA+ FN + + P T + L LC
Sbjct: 407 QMPEYGCSVGIVTYNALVNGFCVQGRVD--SALELFNSLPCE---PNTITYTTLLTGLCH 461
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ D E+ + ND ++ ++NV+VSF C G + EA ++Q+M G P++
Sbjct: 462 AERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLIT 521
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
+N+L++ + A +L + + G S + TY+ ++ S IE A+++FH +
Sbjct: 522 FNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQ 581
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+ G+ P A Y +L LC+ A + F V++ M S + L R L+
Sbjct: 582 DMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLL 640
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 143/326 (43%), Gaps = 4/326 (1%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I C+ R +A +VL D AY + + G + + + +
Sbjct: 76 LIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRL---DAARRLIASMP 132
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAI 350
V P Y I GL R+ +A L + ++ + L+ +V S A+
Sbjct: 133 VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAM 192
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ M KG P + T + + +C+ ++ D+ ++ LS+ + D SY ++ L
Sbjct: 193 KVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGL 252
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C + R + + EM P+ ++ L+ CR ++ A ++ D+M GC+ N
Sbjct: 253 CAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANT 312
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
NI+I+ + G ++ A +NM G +PD +YT++L+GLC+ + A E+ N+
Sbjct: 313 TLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNE 372
Query: 531 SVNHDVMLARSILSTFMISLCRRVLI 556
V + +TF+ LC++ LI
Sbjct: 373 MVRKNCPPNEVTFNTFICILCQKGLI 398
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/426 (20%), Positives = 173/426 (40%), Gaps = 12/426 (2%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
F +SY ++LK L +++ ++ + ++ N + + ++ +G ++A
Sbjct: 238 FQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAI 297
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
V + + + +CN ++ + G +D+A + + M G TI + +
Sbjct: 298 EVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGL 357
Query: 200 CENAKLGQVLSMLDE-VRKR--ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C + +L+E VRK N + + I +L C+ +++A +++++
Sbjct: 358 CRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICIL-----CQKGLIDQAILLIEQMPEYG 412
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C + Y + F + G V + L+ L P T Y + GL R+ A
Sbjct: 413 CSVGIVTYNALVNGFCVQGRV---DSALELFNSLPCEPNTITYTTLLTGLCHAERLDAAA 469
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
EL ++ ++ N L+ AI M+E G P L T + L +
Sbjct: 470 ELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGI 529
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
+ S+E +E+ L + D +Y+ +V L R+ EA + ++ G+ P
Sbjct: 530 TEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKA 589
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YN ++ A C+ A + M ++ C N TY ILI + G ++ A +
Sbjct: 590 VMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSE 649
Query: 496 MLEKGV 501
+ +GV
Sbjct: 650 LCSRGV 655
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 32/190 (16%)
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS---------- 408
+G P + + L +NLC+R ++ + V + + D+ +YN +V+
Sbjct: 64 RGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDA 123
Query: 409 ----------------------FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
LC GR+ +A ++ +M R+ P V Y L+EA C
Sbjct: 124 ARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVC 183
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ A K+ D+M A GC+ N+ TYN++I+ ++ A ++ + + G PD
Sbjct: 184 KSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTV 243
Query: 507 TYTSLLEGLC 516
+YT++L+GLC
Sbjct: 244 SYTTVLKGLC 253
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L EA +++ +G PDV L+ CR A ++ SG ++ YN
Sbjct: 51 LAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNT 110
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
L++ + G ++ A RL +M V PDA TYT L+ GLC + A + + + +
Sbjct: 111 LVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRE 167
Query: 536 VMLARSILSTFMISLCR 552
+ + + ++C+
Sbjct: 168 CQPSVVTYTVLLEAVCK 184
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 186/430 (43%), Gaps = 37/430 (8%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCE-DIGPEICNSLLAVLASDGYIDNALKM 176
D+ Y +I L + + T A + ++K NC+ D+ ++ L DG AL M
Sbjct: 111 DAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDV--FTYGMIIDSLCKDGMTTEALDM 168
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE--------NSMING--- 225
F EM G+ + + + C +L + L E+ R NS+I+G
Sbjct: 169 FSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSR 228
Query: 226 ----------------------SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ ++I G CK +V EA ++L+ + + +PD +
Sbjct: 229 AGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILT 288
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + L+G + + + + G+ Y I G +++I EA L E +
Sbjct: 289 YNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMR 348
Query: 324 SGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
N LIG++ S R+A F M G+ LST L LCK +
Sbjct: 349 PKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLE 408
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E +++++ + ++ ++E +++++ +C +G+L EA+ E+ + GL+PD YN L+
Sbjct: 409 EAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILI 468
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
C + +L A KL QM GC + T+N++I + EI A++L M + +
Sbjct: 469 NGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFS 528
Query: 503 PDATTYTSLL 512
PD + LL
Sbjct: 529 PDEAVTSMLL 538
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 167/363 (46%), Gaps = 6/363 (1%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
I +A+++FDEM+ +G+ +G+ I C+ K G + + ++++ G V
Sbjct: 93 IPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGN----CKGDVFT 148
Query: 230 V-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+II CK EA + E+ PD + Y + + G + E K+
Sbjct: 149 YGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEME 208
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPR 347
G++ Y I GL E ++V F+ D LI G
Sbjct: 209 GRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVG 268
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A M KG+ P + T + L LC + ++ ++++ L+ ++ SYN+++
Sbjct: 269 EAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILI 328
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+ C ++ EA+ + +EM+ KGL P YN+L+ A C+ +R A+KL+ +M G
Sbjct: 329 NGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQF 388
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
L TY +L+ + G +E A+ LF ++ + P+ ++ LL+G+C+ L+ A++
Sbjct: 389 LKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQ 448
Query: 528 FNK 530
F++
Sbjct: 449 FDE 451
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 160/369 (43%), Gaps = 44/369 (11%)
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
V +T+ GV++ EN + + + DE+ E + + ++I+G CK ++
Sbjct: 78 VTVTTLVKGVWM----ENG-IPDAVQLFDEMT--EKGLFGDAKTYGILINGLCKARKTGL 130
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A K+ ++++ CK D Y ++ + G E + + G+ P Y +
Sbjct: 131 AIKLHEKMK-GNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 189
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFF-NFMIEKGRVP 363
GL R+ EA E + + + D N+LI +S + +F N M+++G P
Sbjct: 190 GLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP 249
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
D FT + +++ LC G++ EA ++
Sbjct: 250 -------------------------------DAFT----FTILIDGLCKEGKVGEAQQIL 274
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+ M KG +PD+ YN+LM C L A KL++ + G N+ +YNILI+ + +
Sbjct: 275 ELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKD 334
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
+I+ A RLF M KG+ P TY +L+ LCQ ++ A ++F + L S
Sbjct: 335 QKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTY 394
Query: 544 STFMISLCR 552
+ LC+
Sbjct: 395 CVLLDGLCK 403
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 131/278 (47%), Gaps = 5/278 (1%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
L+Y++++ L L Q+ + + + I L+ Y +I + + +AF +F E
Sbjct: 287 LTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEE 346
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ N+L+ L G + A K+F EM G + V + C+N
Sbjct: 347 MRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGH 406
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + + + ++K E+ N V ++L + G C+ ++EEA+K DE+ +PD IAY
Sbjct: 407 LEEAIDLFQSIKKTEHK-PNIEVFSIL-LDGMCRAGKLEEAWKQFDEISKNGLEPDTIAY 464
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
I+ G + E +L + + G P + + I L+ E I EA +L E + +
Sbjct: 465 NILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRN 524
Query: 325 GKFTIDDDVLNALIGSVSSIDPR--SAIVFFNFMIEKG 360
F+ D+ V + L+ ++S DP+ +A+V ++KG
Sbjct: 525 RNFSPDEAVTSMLL-CLASFDPQWHAALVSLPNALQKG 561
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 42/233 (18%)
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS--- 413
+++G P T++ L K + N + V+++ ++ F D ++Y ++++ LC +
Sbjct: 69 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128
Query: 414 -------------------------------GRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
G EA + EM G+ PDV Y+SLM
Sbjct: 129 GLAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+ CR L+ A + + +M G S ++ TYN LI S G + + M+++G +
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSILSTFMISLC 551
PDA T+T L++GLC+E + A ++ +K D++ +T M LC
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDIL----TYNTLMNGLC 297
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 85/178 (47%), Gaps = 2/178 (1%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S ++Y++++ +L S ++ + +++ L S Y ++ L + + ++A +F
Sbjct: 355 STVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLF 414
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+K E+ + LL + G ++ A K FDE+S G+E TI + + I C
Sbjct: 415 QSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNK 474
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
L + + +L ++ E + S+ +II K + EA ++L+E+R R PD
Sbjct: 475 GMLSEAVKLLWQM--EEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 530
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
++G +PD +L++ E+ + A +L+D+M G G+ KTY ILI+ + +
Sbjct: 70 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
A++L H ++ D TY +++ LC++ A ++F++ + ++ + S+ M
Sbjct: 130 LAIKL-HEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188
Query: 548 ISLCR 552
LCR
Sbjct: 189 DGLCR 193
>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
Length = 665
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/530 (21%), Positives = 223/530 (42%), Gaps = 16/530 (3%)
Query: 11 TRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGF 70
T S II R +W+ +E L GL L P +V +V+ L+ +A+ F
Sbjct: 59 TETSCVIIG---RALECGRWSESVELELE--GLHVELDPFVVNKVLRG--LSDSGMAVRF 111
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
+ WA +P F H+ + I+ L + + L +V+ + S+YR ++
Sbjct: 112 YWWAESRPGFYHNNFAIAYIISLLFVDDNFALLLEFLGRVRSQGVAFHRSLYRVLLAGYA 171
Query: 131 QGKNTQKAFSVFNE-VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
+ F+E V C + G + N + V+ + D K ++ +G +
Sbjct: 172 RAGKFDSVIETFDEMVTSGCREFGVDY-NRFIGVMIKNCCFDLVEKYYNMALAKGFCLTP 230
Query: 190 IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVL 249
+ +I C++ ++ V +L ++ K + +H C R+ +A +++
Sbjct: 231 FTYSRWITALCQSNRIELVEELLTDMDKF--GCFPDFWACNIYVHYLCGHNRLYDALQMV 288
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
+++ ++ PD + Y V E + ++ + G+ P I GL
Sbjct: 289 EKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKN 348
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLS 366
+++ EA EL +++ ++ + NALI SI+ V +FM G P +
Sbjct: 349 QKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTV--SFMQRNGCEPDVV 406
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T + L + C +D+ + + + + D SYN+++ LC + +L +A+ + +
Sbjct: 407 TYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDH 466
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
G D+ N L++A CR + A L+ +M G + TY ILI+ +G
Sbjct: 467 MEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYS 526
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
A LF ML + P+ Y +L LC+ + + A ++F + +V
Sbjct: 527 NLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEV 576
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/475 (20%), Positives = 197/475 (41%), Gaps = 41/475 (8%)
Query: 70 FFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSL 129
++N A + F +P +Y + +L S +I ++ +L + D + L
Sbjct: 217 YYNMALAK-GFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYL 275
Query: 130 IQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEF 187
A + K + GP++ ++++ L A+ +++EM RG++
Sbjct: 276 CGHNRLYDALQMVE--KMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKP 333
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
+ G I+ C+N K+ + + + + +N S+ LI GF + +E+A+K
Sbjct: 334 DVVACGALIFGLCKNQKVDEAFELASRMLTLD-IQLNVSIYNALI-SGFWRAGSIEKAYK 391
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
+ ++ C+PD + Y I+ + +G + E +++K GV P Y + GL
Sbjct: 392 TVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGL- 450
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
C+A +L + A F + +E G + +
Sbjct: 451 -----CKAHQLDK----------------------------AFAFVSDHMEVGGFCDIVS 477
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ L C+ K + + ++K + D +Y ++++ L G A + +M
Sbjct: 478 CNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQML 537
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
+ P+V+ YN ++ C+ + A+K++ QM S + T+N LI +
Sbjct: 538 NTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAV 597
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
AL LF M KGV PD T+ ++ GL E A+E++ + + ++L R +
Sbjct: 598 EALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYMMENGIILDRDV 652
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 155/324 (47%), Gaps = 2/324 (0%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+++ C R+EEA V+ ++R C P+ + Y + F G + E V+ R+
Sbjct: 157 ILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREE 216
Query: 291 GVA-PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RS 348
G A P + + GL R+ A+++ + +V D N L+ +
Sbjct: 217 GNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHE 276
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
++ F+ M ++G VP + T ++L CK ++ V + + + ++ ++
Sbjct: 277 SLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID 336
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C G L +A ++EM++ G+ P V YN+L+ C+ + A++L +M A
Sbjct: 337 GFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP 396
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TY+ +IS + +VG ++ A +L ML+KGV PDA TY+SL+ GLC+E L A E+F
Sbjct: 397 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELF 456
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
+ V +T + C+
Sbjct: 457 ENMLQLGVQPDEFTYTTLIDGHCK 480
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 168/379 (44%), Gaps = 2/379 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L + G ++ A+ + +M G + + + + FC +L ++ +R+
Sbjct: 156 NILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMRE 215
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
N+ N V +++G CK R+E A KV DE+ PD ++Y + + +G +
Sbjct: 216 EGNAKPN-LVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCL 274
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E V + + G+ P + I + +A L + +++ AL
Sbjct: 275 HESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTAL 334
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G A++ M + G P++ + L CK + D E+ + + A
Sbjct: 335 IDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRV 394
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ +Y+ ++S C G L A+ + Q+M +KG+ PD Y+SL+ C E L A +
Sbjct: 395 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 454
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L++ M G + TY LI + G +E AL L M+ KGV PD TY+ L+ GL
Sbjct: 455 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 514
Query: 517 QETNLQAAFEVFNKSVNHD 535
+ + A + K + D
Sbjct: 515 KSARTKEAHRLLFKLYHED 533
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 203/474 (42%), Gaps = 28/474 (5%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
+ +PN ++++S++ L + ++ V ++ + D Y ++ +
Sbjct: 217 GNAKPNL----VTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVG 272
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
++ +VF+E+ + P++ SL+ G ++ A+ + +M RG+ + +
Sbjct: 273 CLHESLAVFSEMTQ--RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 330
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLD 250
F I FC+ L L ++E+RK I SV+ +I+G+CK R++ A +++
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRK---CGIQPSVVCYNALINGYCKLGRMDLARELIR 387
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
E+ + KPD + Y + + +G++ + +K K GV P Y I GL E+
Sbjct: 388 EMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEK 447
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
R+ +A EL E ++ D+ LI G + A+ + MI KG +P + T S
Sbjct: 448 RLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS 507
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM------------VSFL---CTSG 414
L L K ++ E + L D D Y+ + V+ L C G
Sbjct: 508 VLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 567
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
++EA V Q M + D S Y+ L+ CR +R A QM SG S N +
Sbjct: 568 LMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTI 627
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
L+ E G + A ++L DA +L++ +E N+ A +V
Sbjct: 628 SLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVL 681
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 170/410 (41%), Gaps = 51/410 (12%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NS++ L G ++ A K+FDEM G+ + + + +C+ L + L++ E+ +
Sbjct: 227 NSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ 286
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R ++ V +IH CK +E+A ++ ++R R + + + + + + F G +
Sbjct: 287 R--GLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFL 344
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ + +++ RK G+ P Y I G R+ A+EL
Sbjct: 345 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL------------------- 385
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
M K P + T S + CK D ++ + +
Sbjct: 386 ---------------IREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVL 430
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D +Y+ ++ LC RL +A + + M + G+ PD Y +L++ C+E + A L
Sbjct: 431 PDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSL 490
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY--------- 508
D+M G ++ TY++LI+ S+ + A RL + + PD Y
Sbjct: 491 HDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSK 550
Query: 509 ------TSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+LL+G C + ++ A +V+ ++ + L S+ S + CR
Sbjct: 551 AEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCR 600
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 113/220 (51%), Gaps = 1/220 (0%)
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
NA++ ++S SA F + M+ G P + T + L + LC R + +E V V +
Sbjct: 122 NAVLLALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGA 181
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG-LDPDVSFYNSLMEACCREDLLRP 453
+ +YN +V+ C +G L A V+ M+ +G P++ +NS++ C+ +
Sbjct: 182 GCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEG 241
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A+K++D+M G + ++ +YN L+S + +VG + +L +F M ++G+ PD T+TSL+
Sbjct: 242 ARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIH 301
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
C+ NL+ A + + + + + + C++
Sbjct: 302 ATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKK 341
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 174/382 (45%), Gaps = 11/382 (2%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK-- 217
L + +A D L + +M +G+ + + I FC KL S + ++ K
Sbjct: 192 LFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG 251
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E + I S + I+G C RV EA +++D + KPD I + L G
Sbjct: 252 YEPNTITFSTL----INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKE 307
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E +++ K + G P Y + + + A EL + +D + +
Sbjct: 308 AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 367
Query: 338 IGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
I + S+D +A FN M KG + T + L C + D+ ++ + +
Sbjct: 368 IDGLCKHGSLD--NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 425
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ +++V++ G+LREA + +EM +G+ PD Y SL++ C+E+ L A
Sbjct: 426 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 485
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++ D M + GC N++T+NILI+ + + I+ L LF M +GV D TY +L++G
Sbjct: 486 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 545
Query: 515 LCQETNLQAAFEVFNKSVNHDV 536
C+ L A E+F + V+ V
Sbjct: 546 FCELGKLNVAKELFQEMVSRKV 567
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 178/406 (43%), Gaps = 47/406 (11%)
Query: 130 IQGKNTQKAFSVFNEVKFNCE----DIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
+ GK + + V++ C+ GP +L V+ G A+++ +M R +
Sbjct: 303 LSGKEAEAMLLIDKMVEYGCQPNAVTYGP-----VLNVMCKSGQTALAMELLRKMEERNI 357
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEE 244
+ + + + I C++ L ++ +E+ E I ++I ++I GFC R ++
Sbjct: 358 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEM---EMKGITTNIITYNILIGGFCNAGRWDD 414
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
K+L ++ R+ P+ + + ++ + F G + E E + K+ G+AP T Y I
Sbjct: 415 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 474
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT 364
G E + +A ++ + M+ KG P
Sbjct: 475 GFCKENHLDKANQM----------------------------------VDLMVSKGCDPN 500
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
+ T + L CK N+ D+ +E+++ +S D +YN ++ C G+L A + Q
Sbjct: 501 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 560
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
EM + + P++ Y L++ C A ++++++ S ++ YNI+I
Sbjct: 561 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 620
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+++ A LF ++ KGV P TY ++ GLC++ L A +F K
Sbjct: 621 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 666
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 190/442 (42%), Gaps = 40/442 (9%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN ++Y +L + S Q +L++++ I LD+ Y II L + +
Sbjct: 323 QPN----AVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 378
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
AF++FNE++ N L+ + G D+ K+ +M R + + + F V I
Sbjct: 379 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 438
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
F + KL + + E+ R + ++ +I GFCK +++A +++D + +
Sbjct: 439 DSFVKEGKLREAEELHKEMIHR--GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 496
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C P+ + I+ + + + + +K GV T Y I G ++ AK
Sbjct: 497 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 556
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
EL F M+ + P + T L LC
Sbjct: 557 EL----------------------------------FQEMVSRKVPPNIVTYKILLDGLC 582
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+S++ +E+++ + + D+ YN+++ +C + ++ +A+ + + KG+ P V
Sbjct: 583 DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK 642
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN ++ C++ L A+ L+ +M G + + TYNILI G+ +++L +
Sbjct: 643 TYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 702
Query: 497 LEKGVAPDATTYTSLLEGLCQE 518
G + DA+T +++ L +
Sbjct: 703 KRCGFSVDASTIKMVIDMLSDD 724
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 95/211 (45%)
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
I AI F MI +PT+ S L + K + D ++ + K + ++ +
Sbjct: 164 DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 223
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
++M++ C +L A+ + ++ + G +P+ +++L+ C E + A +L D+M
Sbjct: 224 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 283
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G +L T N L++ G+ A+ L M+E G P+A TY +L +C+
Sbjct: 284 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 343
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
A E+ K ++ L S + LC+
Sbjct: 344 LAMELLRKMEERNIKLDAVKYSIIIDGLCKH 374
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 174/382 (45%), Gaps = 11/382 (2%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK-- 217
L + +A D L + +M +G+ + + I FC KL S + ++ K
Sbjct: 94 LFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG 153
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E + I S + I+G C RV EA +++D + KPD I + L G
Sbjct: 154 YEPNTITFSTL----INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKE 209
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E +++ K + G P Y + + + A EL + +D + +
Sbjct: 210 AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269
Query: 338 IGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
I + S+D +A FN M KG + T + L C + D+ ++ + +
Sbjct: 270 IDGLCKHGSLD--NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ +++V++ G+LREA + +EM +G+ PD Y SL++ C+E+ L A
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++ D M + GC N++T+NILI+ + + I+ L LF M +GV D TY +L++G
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 515 LCQETNLQAAFEVFNKSVNHDV 536
C+ L A E+F + V+ V
Sbjct: 448 FCELGKLNVAKELFQEMVSRKV 469
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/470 (21%), Positives = 206/470 (43%), Gaps = 52/470 (11%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQIN-AIDSVLKQVKVNKITLDSSVYRFI 125
A+G +PN +++ +++ L L +++ A++ V + V++ ++ +
Sbjct: 145 AMGKIIKLGYEPN----TITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLV 200
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCE----DIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
+ GK + + V++ C+ GP +L V+ G A+++ +M
Sbjct: 201 NGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP-----VLNVMCKSGQTALAMELLRKME 255
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGK 240
R ++ + + + I C++ L ++ +E+ E I ++I ++I GFC
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM---EMKGITTNIITYNILIGGFCNAG 312
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
R ++ K+L ++ R+ P+ + + ++ + F G + E E + K+ G+AP T Y
Sbjct: 313 RWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYT 372
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKG 360
I G E + +A ++ + M+ KG
Sbjct: 373 SLIDGFCKENHLDKANQM----------------------------------VDLMVSKG 398
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P + T + L CK N+ D+ +E+++ +S D +YN ++ C G+L A
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+ QEM + + P++ Y L++ C A ++++++ S ++ YNI+I
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+++ A LF ++ KGV P TY ++ GLC++ L A +F K
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 194/449 (43%), Gaps = 41/449 (9%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN ++Y +L + S Q +L++++ I LD+ Y II L + +
Sbjct: 225 QPN----AVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
AF++FNE++ N L+ + G D+ K+ +M R + + + F V I
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
F + KL + + E+ R + ++ +I GFCK +++A +++D + +
Sbjct: 341 DSFVKEGKLREAEELHKEMIHR--GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C P+ + I+ + + + + +K GV T Y I G ++ AK
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
EL F M+ + P + T L LC
Sbjct: 459 EL----------------------------------FQEMVSRKVPPNIVTYKILLDGLC 484
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+S++ +E+++ + + D+ YN+++ +C + ++ +A+ + + KG+ P V
Sbjct: 485 DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK 544
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN ++ C++ L A+ L+ +M G + + TYNILI G+ +++L +
Sbjct: 545 TYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAF 525
G + DA+T +++ L + L+ +F
Sbjct: 605 KRCGFSVDASTIKMVIDML-SDGRLKKSF 632
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 95/211 (45%)
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
I AI F MI +PT+ S L + K + D ++ + K + ++ +
Sbjct: 66 DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
++M++ C +L A+ + ++ + G +P+ +++L+ C E + A +L D+M
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G +L T N L++ G+ A+ L M+E G P+A TY +L +C+
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
A E+ K ++ L S + LC+
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 130/542 (23%), Positives = 237/542 (43%), Gaps = 75/542 (13%)
Query: 26 PARKWTPLLEQTLHQL----GLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFT 81
P R ++ L + H+ + ++SPS V+ + + L AL F +W SQ P +
Sbjct: 63 PHRLFSILSKPNWHKCPSLKSMVPAISPSHVSSLFS--LDLDPKTALNFSHWISQNPRYK 120
Query: 82 HSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKI-TLDSSVYRFIIPSLIQGKNTQKAFS 140
HS SY S+L L N V+ ++++ I + DS + L + N ++F
Sbjct: 121 HSVYSYASLLTLLI----NNGYVGVVFKIRLLMIKSCDSVADTLFVLDLCRKMNKDESFE 176
Query: 141 VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+ ++ C N+LL LA G +D +++ EM V + + + +C
Sbjct: 177 LKYKLIIGCY-------NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYC 229
Query: 201 ENAKL---GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
+ + Q +SM+ E + S+I G+C+ K ++ AFKV E+ ++ C
Sbjct: 230 KVGNVEEANQYVSMIVEAGLDPDFFTYTSLIM-----GYCQRKDLDSAFKVFKEMPLKGC 284
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
+ + +A Y I GL VERRI EA +
Sbjct: 285 RRNEVA-----------------------------------YTHLIHGLCVERRIDEAMD 309
Query: 318 LGEVIVSGKFTIDDD------VLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSN 370
L V K DDD LI ++ + +S A+ M EKG P + T +
Sbjct: 310 L---FVKMK---DDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTV 363
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L +LC + K ++ E+ + ++ +YN +++ C G + +A V++ M+ +
Sbjct: 364 LIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRN 423
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L P+ YN L++ C+ ++ + A + ++M ++ TYN LI G + A
Sbjct: 424 LRPNTRTYNELIKGYCKRNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
RL M ++G+ PD TYTS+++ LC+ ++ A ++F+ DV+ + + +
Sbjct: 483 RLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGY 542
Query: 551 CR 552
C+
Sbjct: 543 CK 544
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 186/414 (44%), Gaps = 4/414 (0%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMF 177
D Y +I Q K+ AF VF E+ L+ L + ID A+ +F
Sbjct: 252 DFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLF 311
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFC 237
+M + + V I C + + + L+++ E+ E + ++I C
Sbjct: 312 VKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEME--EKGIKPNIHTYTVLIDSLC 369
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
++E+A ++L ++ + P+ I Y + + G + + V++ + P T
Sbjct: 370 SQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTR 429
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFM 356
Y E I G +R + +A + ++ K D N+LI G S + SA + M
Sbjct: 430 TYNELIKGY-CKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
++G VP T +++ +LCK + +E +++ L D ++ Y ++ C +G++
Sbjct: 489 NDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKV 548
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
EA+ ++++M K P+ +N+L+ C + L+ A L ++M + T IL
Sbjct: 549 NEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTIL 608
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
I + + G+ + A R F ML G PDA TYT+ ++ C+E LQ A ++ K
Sbjct: 609 IHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAK 662
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/466 (22%), Positives = 197/466 (42%), Gaps = 14/466 (3%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
A P+F +Y S++ + +++ V K++ + + Y +I L +
Sbjct: 247 AGLDPDF----FTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVER 302
Query: 134 NTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+A +F VK +D P + L+ L AL + EM +G++ +
Sbjct: 303 RIDEAMDLF--VKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHT 360
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ V I C KL + +L ++ E ++ + +I+G+CK +E+A V++
Sbjct: 361 YTVLIDSLCSQCKLEKARELLGQML--EKGLMPNVITYNALINGYCKRGMIEDALDVVEL 418
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ R +P+ Y + + + +V + VL K + V P Y I G
Sbjct: 419 MESRNLRPNTRTYNELIKGY-CKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
A L ++ D ++I S+ S A F+ + +K +P + +
Sbjct: 478 FDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTA 537
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L CK K +E + + + + + + ++N ++ LCT G+L+EA + ++M +
Sbjct: 538 LIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKID 597
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L P VS L+ ++ A + + QM +SG + TY I + G ++ A
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAE 657
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+ M E GV+PD TY+SL++G +AF V + HD
Sbjct: 658 DMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRM--HDT 701
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 116/533 (21%), Positives = 217/533 (40%), Gaps = 37/533 (6%)
Query: 51 LVARVINPYLLTHHSLALGFF---NWASQQPNFTHSPL--------SYHSILKSLSLSRQ 99
+V ++P T+ SL +G+ + S F PL +Y ++ L + R+
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERR 303
Query: 100 INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--C 157
I+ + ++K + Y +I +L + +A ++ E++ + I P I
Sbjct: 304 IDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEE--KGIKPNIHTY 361
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
L+ L S ++ A ++ +M +G+ + I + I +C+ + L +++ +
Sbjct: 362 TVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMES 421
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R N N LI G+CK + V +A VL+++ R+ PD + Y + + G+
Sbjct: 422 R-NLRPNTRTYNELI-KGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+L G+ P Y I L +R+ EA +L + + + + AL
Sbjct: 479 DSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTAL 538
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G + A + M+ K +P T + L LC K E + + + D
Sbjct: 539 IDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDL 598
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ + +++ L G AY Q+M G PD Y + ++ CRE L+ A+
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAED 658
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE--- 513
+ +M +G S +L TY+ LI + ++G A + M + G P T+ SL++
Sbjct: 659 MVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLL 718
Query: 514 ------------GLCQETNLQA---AFEVFNKSVNHDVMLARSILSTFMISLC 551
G+C +N+ E+ K V H V M+ +C
Sbjct: 719 EMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGIC 771
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 110/522 (21%), Positives = 223/522 (42%), Gaps = 90/522 (17%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++K+L S + + +++K+++ I + Y +I SL +KA + ++
Sbjct: 325 TYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQM 384
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ + P + N+L+ G I++AL + + M R + +T + I +C+
Sbjct: 385 LE--KGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKR- 441
Query: 204 KLGQVLSMLDEVRKRE--------NSMINGS-----------VIAVL------------- 231
+ + + +L+++ +R+ NS+I+G +++++
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYT 501
Query: 232 -IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I CK KRVEEA + D L ++ P+ + Y + + + G V E ++L+K
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSK 561
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
P + + I GL + ++ EA L E +V ID +
Sbjct: 562 NCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVK-------------------IDLQ--- 599
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
PT+ST + L L K D ++ + ++ D +Y +
Sbjct: 600 ------------PTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C GRL++A ++ +MK G+ PD+ Y+SL++ A + +M +GC +
Sbjct: 648 CREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQ 707
Query: 471 KTYNILISKFSEV--GEIEGA----------------LRLFHNMLEKGVAPDATTYTSLL 512
T+ LI E+ G+++G + L M+E GV P+A +Y L+
Sbjct: 708 HTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLM 767
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRV 554
G+C+ NL+ A +VF+ + + ++ ++S C ++
Sbjct: 768 LGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKL 809
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 100/461 (21%), Positives = 194/461 (42%), Gaps = 64/461 (13%)
Query: 129 LIQG---KNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHR 183
LI+G +N KA V N K + P++ NSL+ G D+A ++ M+ R
Sbjct: 434 LIKGYCKRNVHKAMGVLN--KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR 491
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G+ + I C++ ++ + + D + +++ +I V+ +I G+CK +V
Sbjct: 492 GLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKD--VIPNVVMYTALIDGYCKAGKVN 549
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL------------- 290
EA +L+++ + C P+ + + + G + E ++ +K K+
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILI 609
Query: 291 ----------------------GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFT 328
G P + Y FI E R+ +A+++ + +
Sbjct: 610 HRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVS 669
Query: 329 IDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS------ 381
D ++LI + SA V M + G P+ T +L K+L +
Sbjct: 670 PDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGE 729
Query: 382 ------------DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
D +VE+ + + + + +SY ++ +C G LR A V M++K
Sbjct: 730 PGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQK 789
Query: 430 -GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
G+ P +N+L+ CC+ + A K+ D M G L++ ILI + + GE E
Sbjct: 790 EGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKER 849
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+F N+L+ G D + +++G+ ++ ++A +E+FN
Sbjct: 850 GTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFN 890
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M+E P + T + + CK +E + ++ D +Y ++ C
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L A+ V +EM KG + Y L+ C E + A L+ +M C ++TY +
Sbjct: 269 LDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTV 328
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI AL L M EKG+ P+ TYT L++ LC + L+ A E+ + +
Sbjct: 329 LIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKG 388
Query: 536 VMLARSILSTFMISLCRRVLI 556
+M + + C+R +I
Sbjct: 389 LMPNVITYNALINGYCKRGMI 409
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 159/405 (39%), Gaps = 65/405 (16%)
Query: 103 IDSVLKQVKVNK--ITLDSSVYRFIIP------SLIQGKNTQKAF--SVFNEVKFNCEDI 152
ID K KVN+ + L+ + + +P +LI G T + E K D+
Sbjct: 539 IDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDL 598
Query: 153 GPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS 210
P + L+ L DG D+A + F +M G + + FI +C +L
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAED 658
Query: 211 MLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD---FIAYRIV 267
M+ + +EN + +I G+ R AF VL + C+P F++
Sbjct: 659 MV--AKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKH 716
Query: 268 AEEFK------------LMGSVFEREVV---LKKKRKLGVAPRTNDYREFILGLIVERRI 312
E K +M ++ E ++V L+K + GV P Y + +LG I
Sbjct: 717 LLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLG------I 770
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
CE +G + V+ K VF + ++G P+ + L
Sbjct: 771 CE---IGNLRVAEK------------------------VFDHMQQKEGISPSELVFNALL 803
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
CK K +E +V + + +ES +++ L G V Q + + G
Sbjct: 804 SCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYY 863
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
D + +++ ++ L+ +L++ M +GC+ + +TY++LI
Sbjct: 864 DDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLI 908
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/509 (18%), Positives = 202/509 (39%), Gaps = 71/509 (13%)
Query: 78 PNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQK 137
P + ++ + ++ L+ + ++ + L+++++ + + + + +
Sbjct: 49 PGTGDAARAHEAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDR 108
Query: 138 AFSVFNEVKFNCEDIG------PEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
A F D+G P + N L+ L + + + ++D M GV +
Sbjct: 109 ALKTFYRAV---HDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFT 165
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKR---ENSMINGSVIAVL----------------- 231
+ + + C+N ++G MLDE+ ++ + + ++++VL
Sbjct: 166 YNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP 225
Query: 232 --------IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
I+ C+ R++E F V+ ++ R +P+ I Y + + F G + +
Sbjct: 226 PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAI 285
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
L + G P + + GL + R+ +A ++
Sbjct: 286 LARMVITGCTPNVVTFTALVRGLFDDGRVHDALDM------------------------- 320
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ +M+ +G P+ + + L + LC + + + F ++ +Y
Sbjct: 321 ---------WRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTY 371
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+ ++ +G L A + +M R G P+V Y ++++ C++ + AK L D+M
Sbjct: 372 STLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLL 431
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
C N T+N LI + + AL +FH M G P+ TY L+ GL +E N
Sbjct: 432 ENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGD 491
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCR 552
A + + +H + L+ +T + LC+
Sbjct: 492 ALHMVTEMQSHGIELSLVTYNTVVSGLCQ 520
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 181/443 (40%), Gaps = 62/443 (13%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY++I+ +L ++ + SV+ + V R + P++I AF E+
Sbjct: 230 SYNAIVLALCREFRMQEVFSVVSDM----------VGRGLQPNVITYTTIVDAFCKAGEL 279
Query: 146 KFNCEDIG--------PEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
+ C + P + +L+ L DG + +AL M+ M G ST+ + +
Sbjct: 280 RMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNIL 339
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
I C L S+L+ + ++ N + LI GF K + A + +++
Sbjct: 340 IRGLCSVGDLKGASSILNSM-EQHGCFPNVRTYSTLI-DGFSKAGDLGGAISIWNDMSRS 397
Query: 256 ECKPDFIAYRIVAEEF--KLMGSVFEREVVLKKKRKL-GVAPRTNDYREFILGLIVERRI 312
CKP+ + Y + + F KLM F + L K L P T + I R +
Sbjct: 398 GCKPNVVVYTNMVDVFCKKLM---FNQAKSLIDKMLLENCPPNTVTFNTLI------RSL 448
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
C+ + +G A+ F+ M G VP T + L
Sbjct: 449 CDCRRVGR----------------------------ALGVFHEMRRHGCVPNGRTYNELI 480
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
L + + + + + ++ + +YN +VS LC + REA + +M +G+
Sbjct: 481 HGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQ 540
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P+ +++++ A C+E +R A + M C N+ Y IL+++ ++ A+
Sbjct: 541 PNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTY 600
Query: 493 FHNMLEKGVAPDATTYTSLLEGL 515
ML +G+ P+ T+ L+ G+
Sbjct: 601 LLKMLYEGIYPNTVTWNVLVRGV 623
>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
Length = 802
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/509 (22%), Positives = 219/509 (43%), Gaps = 11/509 (2%)
Query: 30 WTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHS 89
W P E + L LR SL PS V V+ +AL FF WA +Q + H P+ Y+S
Sbjct: 157 WNPKHEGQMRNL-LR-SLKPSQVCAVLRSQ--DDERVALKFFYWADRQWRYRHDPMVYYS 212
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
+L+ LS ++ VL +K I + ++ S + + A V ++
Sbjct: 213 MLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAG 272
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ ICN+ + V ++ AL+ + M G+ + + + I +C+ ++ + +
Sbjct: 273 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 332
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RIRECKPDFIAYRIVA 268
+L+++ + + V I+ CK KR+ E ++ ++ + PD + Y +
Sbjct: 333 ELLEDMHSK--GCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLI 390
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKF 327
E LK ++ G Y + L E R+ EAK+L E+
Sbjct: 391 HMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMDCPPDV 450
Query: 328 TIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
V+N + +D A M G P + + L +C+ KS E E+
Sbjct: 451 VTYTAVVNGFC-RLGEVD--KAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM 507
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
+ + + + +Y+V++ L G+L EA V++EM KG P N L+++ CR
Sbjct: 508 MNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCR 567
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+ A+K ++ GC+ N+ + +I F + E++ AL + +M D T
Sbjct: 568 DGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFT 627
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
YT+L++ L ++ + A E+ K ++ +
Sbjct: 628 YTTLVDTLGKKGRIAEATELMKKMLHKGI 656
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 171/391 (43%), Gaps = 14/391 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ +L + D AL + +G +G+ + C+ ++ + +++E+
Sbjct: 387 NTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM-- 444
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
V +++GFC+ V++A K+L + KP+ ++Y + G
Sbjct: 445 ---DCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKS 501
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E ++ + +P + Y + GL E ++ EA ++ +V F +N L
Sbjct: 502 LEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLL 561
Query: 338 IGSVSSIDPRS--AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
+ S+ D R+ A F + KG + + + C+ ++ D + V + +
Sbjct: 562 LQSLCR-DGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLIN 620
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D+ +Y +V L GR+ EA ++++M KG+DP Y +++ C+ +
Sbjct: 621 KHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLV 680
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ ++M + + YN +I K +G++E A L +L DA T +L+EG
Sbjct: 681 AILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGY 738
Query: 516 CQETNLQAAFEV----FNKSVNHDVMLARSI 542
++ +A++V FN+++ DV + +
Sbjct: 739 LKKGVPLSAYKVACRMFNRNLIPDVKMCEKL 769
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 89/434 (20%), Positives = 176/434 (40%), Gaps = 31/434 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++++ L+ + LK + +D Y I+ +L + +A + NE
Sbjct: 384 VTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINE 443
Query: 145 VKFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ D P++ V G +D A K+ M G + +T+ + + C
Sbjct: 444 M-----DCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRT 498
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
K + M++ E+ S+ +I+HG + ++ EA V+ E+ ++ P +
Sbjct: 499 GKSLEAREMMN--MSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPV 556
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV- 321
++ + G E +++ G A ++ I G C+ EL
Sbjct: 557 EINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGF------CQNDELDAAL 610
Query: 322 -IVSGKFTIDD--DV-----LNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
++ + I+ DV L +G I A M+ KG PT T +
Sbjct: 611 SVLDDMYLINKHADVFTYTTLVDTLGKKGRI--AEATELMKKMLHKGIDPTPVTYRTVIH 668
Query: 374 NLCKRNKSDELVEVY-KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
C+ K D+LV + K++S T YN ++ LC G+L EA ++ ++ R
Sbjct: 669 RYCQMGKVDDLVAILEKMISRQKCRT---IYNQVIEKLCVLGKLEEADTLLGKVLRTASR 725
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
D +LME ++ + A K+ +MF ++K L + G+++ A +L
Sbjct: 726 SDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKL 785
Query: 493 FHNMLEKG-VAPDA 505
++E+G ++P +
Sbjct: 786 MLRLVERGHISPQS 799
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 94/240 (39%), Gaps = 20/240 (8%)
Query: 324 SGKFTIDDDV--------LNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+G+F +++D + LIG SS +P+ N L +L
Sbjct: 129 AGRFDVEEDESRHPLVREVGRLIGLRSSWNPKHEGQMRNL---------LRSLKPSQVCA 179
Query: 376 CKRNKSDELVEV---YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
R++ DE V + Y Y D Y M+ L + + + V+ MKR+G+
Sbjct: 180 VLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIY 239
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
++ +M + R LR A K+ M +G NL N I F +E ALR
Sbjct: 240 RTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRF 299
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M G+ P+ TY ++ G C ++ A E+ + + + T M LC+
Sbjct: 300 LERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCK 359
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 174/388 (44%), Gaps = 12/388 (3%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D A ++ +EM + G+ + +G+ I C+N + + ++L+E+ E N + A
Sbjct: 435 DGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMIS-EGLKPNAFMYAP 493
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
LII G K + A + L+++ PD Y + + +G + E E + +K
Sbjct: 494 LII-GHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKR 552
Query: 291 GVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSIDPRSA 349
G+ P Y I G + +A +L +++ SG D + L G S D
Sbjct: 553 GLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKV 612
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
M+ G P + +NL + + V + N D+ Y+ ++S
Sbjct: 613 SSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISG 672
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC + +A G++ EM ++GL+P + YN+L++ CR + A+ ++D + A G N
Sbjct: 673 LCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPN 732
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF---- 525
TY LI + G+I A L+ ML++G+APDA Y L G +L+ A
Sbjct: 733 CVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTE 792
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCRR 553
E+FN+ + S+ +T + C+R
Sbjct: 793 EMFNRGYAN-----VSLFNTLVHGFCKR 815
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 210/470 (44%), Gaps = 7/470 (1%)
Query: 71 FNWASQQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPS 128
F + + ++ SP +Y +++ L ++ ++L ++ + + + VY ++
Sbjct: 298 FGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDG 357
Query: 129 LIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFS 188
++ T +AF + E+ + ++L+ L G + A K+ EM G+
Sbjct: 358 FMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPD 417
Query: 189 TIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFK 247
T + + + +L+E+R NS I +V + ++I+G C+ +EA
Sbjct: 418 TFTYNPLMQGHFQQHDKDGAFELLNEMR---NSGILPNVYSYGIMINGLCQNGESKEAGN 474
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
+L+E+ KP+ Y + G++ L+K K V P Y I GL
Sbjct: 475 LLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLS 534
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
R+ EA+E + D+ + LI G + + A M+ G P
Sbjct: 535 TVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNAD 594
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T ++L + K N +++ + + + + D Y +++ L S + A+ V+ E+
Sbjct: 595 TYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEV 654
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
++ GL PD+ Y+SL+ C+ + A L D+M G + YN LI F G+I
Sbjct: 655 EKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDI 714
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
A +F ++L KG+ P+ TYT+L++G C+ ++ AF+++ + ++ +
Sbjct: 715 SRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGI 764
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 186/442 (42%), Gaps = 9/442 (2%)
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNAL 174
I D Y I + + ++ A VF E++ + N +++ L G ++ A
Sbjct: 239 ILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 298
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR---KRENSMINGSVIAVL 231
+EM G+ +G + C+ ++L + ++LDE+ + N ++ G+
Sbjct: 299 GFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGT----- 353
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
++ GF K + EAF +L E+ +P+ I Y + +G + +LK+ K+G
Sbjct: 354 LVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG 413
Query: 292 VAPRTNDYREFILGLIVERRICEAKE-LGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
+ P T Y + G + A E L E+ SG + G + + + A
Sbjct: 414 LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAG 473
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
MI +G P + L K E + ++ + D+ YN ++ L
Sbjct: 474 NLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGL 533
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
T GR+ EA +++++GL PD Y+ L+ C+ L A +L QM SG N
Sbjct: 534 STVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNA 593
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TY L+ + + + E + +ML G PD Y ++ L + N++ AF V +
Sbjct: 594 DTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE 653
Query: 531 SVNHDVMLARSILSTFMISLCR 552
+ ++ I S+ + LC+
Sbjct: 654 VEKNGLVPDLHIYSSLISGLCK 675
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 89/179 (49%)
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
FM G +P + T S + CK D +V++ + D + +YNVM+S LC S
Sbjct: 232 GFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRS 291
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G + EA+G +EM GL PD Y +LM C+ L+ AK L D+M SG N+ Y
Sbjct: 292 GAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVY 351
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
L+ F + G+ A + M+ GV P+ Y +L+ GLC+ L A ++ + +
Sbjct: 352 GTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMI 410
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 211/495 (42%), Gaps = 31/495 (6%)
Query: 38 LHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFT-----------HSPLS 86
+ QLG L ++ + P T++ L G F + F + S
Sbjct: 396 IGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYS 455
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV- 145
Y ++ L + + ++L+++ + ++ F+ LI G + + S+ E
Sbjct: 456 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNA----FMYAPLIIGHSKEGNISLACEAL 511
Query: 146 -KFNCEDIGPEI-C-NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
K ++ P++ C NSL+ L++ G ++ A + + ++ RG+ + I +C+
Sbjct: 512 EKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKT 571
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVL-IIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
L + +L R+ NS + + ++ G+ K E+ +L + KPD
Sbjct: 572 GNLEKADQLL---RQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDN 628
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE-AKELGE 320
Y IV ++ +VL + K G+ P + Y I GL +I + K +G
Sbjct: 629 HIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLC---KIADMEKAVGL 685
Query: 321 VIVSGKFTIDDDVL--NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ K ++ ++ NALI G S D A F+ ++ KG VP T + L CK
Sbjct: 686 LDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCK 745
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ ++YK + D YNV+ + + L +A + +EM +G +VS
Sbjct: 746 NGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY-ANVSL 804
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
+N+L+ C+ L+ +KL M N +T ++S+F + G++ A R+F +
Sbjct: 805 FNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQ 864
Query: 498 EKGVAPDATTYTSLL 512
+K + AT SLL
Sbjct: 865 QKKASQSATDRFSLL 879
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 1/228 (0%)
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G+ P Y FI R AK++ E + +++ N +I G S A
Sbjct: 238 GILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 297
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F M++ G P T L LCK ++ E + +S + ++ Y +V
Sbjct: 298 FGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDG 357
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
G+ EA+ +++EM G+ P+ Y++L+ C+ L A KL +M G +
Sbjct: 358 FMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPD 417
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
TYN L+ + + +GA L + M G+ P+ +Y ++ GLCQ
Sbjct: 418 TFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQ 465
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 88/206 (42%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
R+A M + G PT + L K+L + + + L ++ + D+ +Y+
Sbjct: 190 RNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTF 249
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ C + A V +EM+R+ + YN ++ CR + A ++M G
Sbjct: 250 IEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGL 309
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
S + TY L++ + ++ A L M G+ P+ Y +L++G +E AF+
Sbjct: 310 SPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFD 369
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+ + ++ V + + + LC+
Sbjct: 370 ILKEMISAGVQPNKIMYDNLIRGLCK 395
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 99/246 (40%), Gaps = 25/246 (10%)
Query: 332 DVLNALI--GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE------ 383
D +++LI G S+ P+ + FF + + P+ + L+ +LC + +
Sbjct: 80 DAVSSLIFGGRSHSLHPKLLLDFFYWSRPRIAPPSADAFARLAASLCAASLFPQANGLLH 139
Query: 384 ------------LVEVYKVLSANDYFTDMES-----YNVMVSFLCTSGRLREAYGVIQEM 426
L + + + D+ + S +V+V +G +R A V+ M
Sbjct: 140 QMILAHPHPPLVLASIQRAIQDTDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMM 199
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
GL P N L++ R D + KL M +G ++ TY+ I + +
Sbjct: 200 ADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDF 259
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
+ A ++F M + A + TY ++ GLC+ ++ AF + V++ +
Sbjct: 260 DAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGAL 319
Query: 547 MISLCR 552
M LC+
Sbjct: 320 MNGLCK 325
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 184/409 (44%), Gaps = 12/409 (2%)
Query: 153 GPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS 210
GP++ N+++A G +D A ++ +M VE + I C + L+
Sbjct: 131 GPDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALA 187
Query: 211 MLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
+L+++ +R + V +++ CK ++A K+LDE+ + C PD + Y +V
Sbjct: 188 VLEDMFRR--GCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNG 245
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
G V + LK G P T Y + GL R +A++L E + +
Sbjct: 246 ICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPN 305
Query: 331 DDVLNALIGSVSS---IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
N LI + ++P A+ M + G P + + L CK+ K + +E
Sbjct: 306 VVTFNMLISFLCRRGLVEP--AMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEF 363
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
+++ + + D+ SYN +++ LC +G + A ++ ++K KG P + YN++++ +
Sbjct: 364 VELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTK 423
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+ A +L D+M + G ++ TY+ + S IE A+R F + + G+ P A
Sbjct: 424 AGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAAL 483
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
Y ++L GLC+ A ++F ++ M S + + L L+
Sbjct: 484 YNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLV 532
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 173/381 (45%), Gaps = 3/381 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L G NAL + ++M RG + + + + C+ + Q + +LDE+
Sbjct: 170 NTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMH- 228
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ V ++++G C+ RVE+A + L L C+P+ ++Y IV +
Sbjct: 229 -DKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERW 287
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ E ++++ G P + I L + A E+ E + T + N L
Sbjct: 288 EDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPL 347
Query: 338 IGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ + A+ F M+ +G P + + + L LC+ + D +E+ L
Sbjct: 348 LHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGC 407
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ SYN ++ L +G+ +EA ++ EM KGL PD+ Y+++ CRED + A +
Sbjct: 408 SPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVR 467
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ ++ G YN ++ + E A+ LF M+ G P+ +TYT L+EGL
Sbjct: 468 TFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLA 527
Query: 517 QETNLQAAFEVFNKSVNHDVM 537
E ++ A E+F + + V+
Sbjct: 528 YEGLVKEARELFAQLCSRGVV 548
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 182/419 (43%), Gaps = 39/419 (9%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A + M+ RG + + + FC + + + +S+ ++++ + ++ V +
Sbjct: 96 AFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTL 155
Query: 233 IHGFCKGKRVEEAFKVLDELRIR-ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
++GFCK KR+ EA + + ++ +C+P+ + Y ++ + + G V E +L++ + G
Sbjct: 156 VNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREG 215
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAI 350
+ Y I E I +EL + ++ K + + + L+ + R A
Sbjct: 216 LKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREAS 275
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
M +G P + + L+ LCK ++ + ++V ++ +YNV+V+ L
Sbjct: 276 EMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGL 335
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW------------ 458
C R+ +A+GV++ M +KG PD YN+L++ C + A LW
Sbjct: 336 CKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKP 395
Query: 459 -------------------------DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
M G GN+ TYN LI + ++ AL+L+
Sbjct: 396 DVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLW 455
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+E G +P++ TY+ ++ GLC+ L A +F K + + + M SLCR
Sbjct: 456 KYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCR 514
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/482 (22%), Positives = 217/482 (45%), Gaps = 15/482 (3%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PN ++Y ++ S ++ +L++++ + D VY +I + + +
Sbjct: 182 RPNL----VTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIE 237
Query: 137 KAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+F+E+ + P + + L+ L G A +M +M+ RGV + + V
Sbjct: 238 TGRELFDEMLR--RKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTV 295
Query: 195 FIWKFCENAKLGQVLSMLD-EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
C+N + G + +LD V+K E G++ ++++G CK R+++AF V++ +
Sbjct: 296 LADGLCKNGRAGDAIKVLDLMVQKGEEP---GTLTYNVVVNGLCKEDRMDDAFGVVEMMV 352
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK--KRKLGVAPRTNDYREFILGLIVERR 311
+ KPD + Y + + G + E + K K V P I GL E R
Sbjct: 353 KKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGR 412
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
+ +A + +V + N LI G +++ A+ + + +E G P T S
Sbjct: 413 VHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSV 472
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
+ LCK ++ + + + YN +++ LC L +A + QEM+
Sbjct: 473 MINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVN 532
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+ DV +N +++ + ++ AK+L +MF + T++ILI++FS++G ++ A+
Sbjct: 533 HNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAM 592
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
L+ M+ G P + SLL+G + + + ++ + DV+L + ST + L
Sbjct: 593 GLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACL 652
Query: 551 CR 552
C
Sbjct: 653 CH 654
>gi|357161570|ref|XP_003579133.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Brachypodium distachyon]
Length = 721
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 136/555 (24%), Positives = 231/555 (41%), Gaps = 13/555 (2%)
Query: 5 PATDLATRISQAIISASNRTRPAR-KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTH 63
P DL+ ++ + R R WTP LE L L LR LSP V V+
Sbjct: 48 PEDDLSEESRSRLVRDTCRLLEQRGSWTPKLEAQLRHL-LR-VLSPPQVRAVLRAQAQGD 105
Query: 64 HSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
A FF WA +Q + H+P + +L LS +R + V++ + + +
Sbjct: 106 ARAAFEFFRWADRQWQYRHAPEVFDEMLGLLSRTRLHDPARRVVRLMIRRGVRRGPRQFA 165
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR 183
++ S + + A V ++ + ICN + VL G +D AL D M
Sbjct: 166 HLMLSYSRAGKLRSAMRVLQLMQTDGCAPDISICNVAVNVLVVAGRVDKALGFADRMRRV 225
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
GVE + + I C ++ + L M+ + K N + ++ CK KRV
Sbjct: 226 GVEPDVVTYNCLIKGLCSVRRVVEALEMIGVMLK--NGCPPDKISYYTVMSFLCKEKRVS 283
Query: 244 EAFKVLDELRIRE-CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
E +L +R D + Y ++ G E L++ Y
Sbjct: 284 EVRSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDEVGYSAV 343
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEK 359
+ + R+ EAKE+ ++S + D +A++ + ID A M +
Sbjct: 344 VHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEID--QARKMMKHMYKN 401
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME-SYNVMVSFLCTSGRLRE 418
G P + T + L LCK KS E E+ S D++T + +Y+V++ G+L+E
Sbjct: 402 GCKPNIVTHTALLNGLCKVGKSSEAWELLNK-SGEDWWTPSDITYSVVMHGFRREGKLKE 460
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
+ V+ +M +KG P N L+ A C+E AK+ +Q + GC+ N+ + +I
Sbjct: 461 SCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTVIH 520
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
FS G++E AL L ++ PD TYT ++ L ++ L+ A + K +N ++
Sbjct: 521 GFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVP 580
Query: 539 ARSILSTFMISLCRR 553
T + C +
Sbjct: 581 TLVTYRTVIHRYCEK 595
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 101/510 (19%), Positives = 208/510 (40%), Gaps = 46/510 (9%)
Query: 67 ALGFFNWASQ---QPNFTHSPLSYHSILKSL-SLSRQINAIDSVLKQVKVNKITLDSSVY 122
ALGF + + +P+ ++Y+ ++K L S+ R + A++ + +K N D Y
Sbjct: 215 ALGFADRMRRVGVEPDV----VTYNCLIKGLCSVRRVVEALEMIGVMLK-NGCPPDKISY 269
Query: 123 RFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC-NSLLAVLASDGYIDNALKMFDEMS 181
++ L + K + S+ ++ + + ++ N L+ VLA G+ D AL+ E
Sbjct: 270 YTVMSFLCKEKRVSEVRSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRESE 329
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
+ +G+ + FC N ++ + ++ E+ +E V ++ GFC+
Sbjct: 330 GKRFRVDEVGYSAVVHSFCLNGRMAEAKEIVGEMISKECH--PDVVTYSAVVDGFCRIGE 387
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+++A K++ + CKP+ + + + +G E +L K + P Y
Sbjct: 388 IDQARKMMKHMYKNGCKPNIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSV 447
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKG 360
+ G E ++ E+ ++ ++ F +N LI ++ P A F KG
Sbjct: 448 VMHGFRREGKLKESCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKG 507
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
+ + + ++ + + + L ++ D+ +Y V+V+ L GRL+EA
Sbjct: 508 CTINVVNFTTVIHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEAT 567
Query: 421 GVIQEMKRKGLDPDV---------------------------------SFYNSLMEACCR 447
G++++M +GL P + S YN ++E C
Sbjct: 568 GLVEKMLNRGLVPTLVTYRTVIHRYCEKGTVEELVDLLDKMLARQELKSVYNQVIEKLCA 627
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
L A L ++ + + +T +IL+ F G A + M ++ + PD
Sbjct: 628 FGKLNEAYGLLSKVLRTASQRDAQTCHILMESFLNRGLTIQAYNVACRMFQRNLIPDLKL 687
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ + L E QAA ++ K V ++
Sbjct: 688 CQKVDDRLVLEERKQAAGKLIVKFVERGLL 717
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 197/451 (43%), Gaps = 38/451 (8%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDE 179
Y ++ SL + T +A +F + + + P I N+++ L + +++F+E
Sbjct: 48 YNIVLQSLCRAGETARALEIFRG-EMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEE 106
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM-----INGSVIAVLIIH 234
+ RG + + I C+ L +E R+ M + V ++I+
Sbjct: 107 LVKRGHHPDVVTYNTLIDSLCKAGDL-------EEARRLHGGMSSRGCVPNVVTYSVLIN 159
Query: 235 GFCKGKRVEEAFKVLDELRIRECK--PDFIAYR----------IVAEEFKLMGSVFEREV 282
G CK R++EA +++ E+ + C P+ I Y + AE +LM S+
Sbjct: 160 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL----- 214
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+ L V+P T + I GL + EA + +++G + + NAL+ +
Sbjct: 215 ---RDGSLRVSPDTVTFSTLIDGLCKCGQTDEA--CNDDMIAGGYVPNVVTYNALVNGLC 269
Query: 343 SIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
D A M++KG P + T S L CK ++ DE +E+ +++ ++
Sbjct: 270 KADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVV 329
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
++N ++ LC S R EA+ + ++ + L PD +N L+ C+ A L+++M
Sbjct: 330 TFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEM 389
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
A ++ T+ LI + G++E A + M GV P+ TY L+ GLC+ +
Sbjct: 390 VAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRI 449
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ E + V+ + + + +LCR
Sbjct: 450 EEPCEFLEEMVSSGCVPESMTYGSLVYALCR 480
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 122/514 (23%), Positives = 212/514 (41%), Gaps = 31/514 (6%)
Query: 44 RDSLSPSLVA--RVINPYLLTHHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQ 99
RD ++P++V +IN L + L G + H P ++Y++++ SL +
Sbjct: 74 RDGVAPTIVTYNTIING-LCKSNELGAGM-ELFEELVKRGHHPDVVTYNTLIDSLCKAGD 131
Query: 100 INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC-- 157
+ + + + Y +I L + +A + E+ D+ P I
Sbjct: 132 LEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 191
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFS--TIGFGVFIWKFCENAKLGQVLSMLDEV 215
NS L L A ++ + + S T+ F I C K GQ DE
Sbjct: 192 NSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC---KCGQT----DEA 244
Query: 216 RKRENSMINGSVIAVLI-----IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
+ MI G + ++ ++G CK ++E A +++ + + PD I Y ++ +
Sbjct: 245 CN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDA 302
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
F V E +L G P + I GL R EA ++ + + D
Sbjct: 303 FCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPD 362
Query: 331 DDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
N LI G+ + + A F M+ K P + T L LCK + + ++
Sbjct: 363 KVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILD 422
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
++ ++ +YNV+V LC SGR+ E ++EM G P+ Y SL+ A CR
Sbjct: 423 LMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRAS 482
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
A +L ++ + G + TYNIL+ + G+ E A+ + M+ KG PD+ T+
Sbjct: 483 RTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFA 542
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
+ GL + NL E+ V+LA+ +L
Sbjct: 543 ACFGGLHRSGNLAGTMELLR------VVLAKGML 570
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHN-MLEKGVAPDATTYTSLLEGLCQETN 520
F S ++ YNI++ GE AL +F M GVAP TY +++ GLC+
Sbjct: 37 FVRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNE 96
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L A E+F + V +T + SLC+
Sbjct: 97 LGAGMELFEELVKRGHHPDVVTYNTLIDSLCK 128
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/510 (23%), Positives = 226/510 (44%), Gaps = 43/510 (8%)
Query: 49 PSLVARVI------NPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINA 102
PSL R + NP L H S+ FF + S QP F + +Y + + L++
Sbjct: 78 PSLSVRHVVDLINRNPLSLPHRSI-FAFFKFISSQPEFRFTVETYFVMARFLAIHEMFVE 136
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEIC--- 157
S+++ V V++ +S+ FI SL++ + T + + + D+G P++
Sbjct: 137 AQSLIELV-VSRKGKNSASSVFI--SLVEMRGTPMCDFLVDALMITYMDLGFIPDVIQCF 193
Query: 158 ------NSLLAVLASDGYIDNALKM---------FDEMSHRGVEFSTIGFGVFIWKFCEN 202
N ++ + +D +K+ + E+ G + F + + KFC+
Sbjct: 194 RLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKE 253
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ + DE+ KR + +V++ +I+G+CK ++ F++ + +PD
Sbjct: 254 GNICDAQKVFDEITKRS---LRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDV 310
Query: 262 IAY----RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
Y + +E K+ G+ + + + G+ P + I G +I KE
Sbjct: 311 FTYSALINALCKENKMDGA----HRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKE 366
Query: 318 LGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+ ++S D + N L+ G + D +A + MI +G P T + L C
Sbjct: 367 SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFC 426
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+ D +E+ K + N D ++ ++ +C GR+ +A ++EM R G+ PD
Sbjct: 427 RGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDV 486
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
Y +M+A C++ + KL +M + G N+ TYN+L++ ++G+++ A L M
Sbjct: 487 TYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAM 546
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
L GV PD TY +LLEG + N ++
Sbjct: 547 LNVGVVPDDITYNTLLEGHHRHANASKHYK 576
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 98/200 (49%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F+ + ++ PT+ + + L CK D + + + D+ +Y+ +++ LC
Sbjct: 263 FDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCK 322
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
++ A+ + EM +GL P+ + +L+ R + K+ + +M + G ++
Sbjct: 323 ENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVL 382
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YN L++ F + G++ A + M+ +G+ PD TYT+L++G C+ ++ A E+ +
Sbjct: 383 YNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMD 442
Query: 533 NHDVMLARSILSTFMISLCR 552
+ + L R S + +C+
Sbjct: 443 QNGIELDRVGFSALICGMCK 462
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 1/217 (0%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN-LCKRNKSDELVEVYKVLSAND 395
L+ + ++P + F I P + N+ N CK + +V+ ++
Sbjct: 211 LLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRS 270
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ S+N +++ C G L + + M++ PDV Y++L+ A C+E+ + A
Sbjct: 271 LRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L+ +M G N + LI S G+I+ + ML KG+ PD Y +L+ G
Sbjct: 331 RLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
C+ +L AA + + + + + +T + CR
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCR 427
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 90/182 (49%), Gaps = 4/182 (2%)
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
NL + K N + + Y + + ++ +N++++ C G + +A V E+ +
Sbjct: 209 GNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITK 268
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
+ L P V +N+L+ C+ L +L M S ++ TY+ LI+ + +++G
Sbjct: 269 RSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDG 328
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSILS 544
A RLF+ M E+G+ P+ +T+L+ G + + E + +K + D++L ++++
Sbjct: 329 AHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Query: 545 TF 546
F
Sbjct: 389 GF 390
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 200/459 (43%), Gaps = 22/459 (4%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
++ +++ +R+++ + K++ + LD+ +I L + + +A+ +F E+
Sbjct: 118 TFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEM 177
Query: 146 KFNCEDIG--PEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ ED P++ +L+ G ++ A+KM M R + + + + C+
Sbjct: 178 EMR-EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCK 236
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
L Q L + R + V +IHG C +V+ A ++DE+ C D
Sbjct: 237 AGDLDQALDLFR--RMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADT 294
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
++Y + + + +G + E + + K+ P Y + G R+ EA+ L E
Sbjct: 295 VSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLEN 354
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+ + D V +++ + S R A F MI + P T S+L LCK
Sbjct: 355 MKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG 414
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ + +EV K + D T Y +++ LC + R EA +++EM K ++P V +N
Sbjct: 415 RVNHAMEVLKNVDKPDVVT----YTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFN 470
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
S++ A CR + A KL M A G + TY L+ FS G +E A LF M K
Sbjct: 471 SVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRK 530
Query: 500 G--------VAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ P+ +++L+ GLC+ + A V +
Sbjct: 531 AKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVEE 568
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/514 (20%), Positives = 207/514 (40%), Gaps = 50/514 (9%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQ-VKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
++Y +++ +++ +L++ V + + D Y ++ L + +A +
Sbjct: 46 VTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVR 105
Query: 144 EVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
E+K + ++L+ + +D ALK++ E+ + I C
Sbjct: 106 EMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRER 165
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
++G+ + E+ RE+ V+ +I GFCK +E+A K+L + R+C P+ +
Sbjct: 166 RIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVV 225
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + G + + + ++ G P Y I GL ++ A+ L + +
Sbjct: 226 TYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEM 285
Query: 323 VSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
+ D NAL+ + A F M K +P T + L + C ++
Sbjct: 286 TATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRL 345
Query: 382 DE---LVEVYKV------------------------LSANDYFTDMESYNV--------- 405
+E L+E K + A ++ +M + NV
Sbjct: 346 EEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSS 405
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++ LC +GR+ A V++ + + PDV Y ++E C D A L ++M
Sbjct: 406 LIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKR 461
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
++ T+N +I +G+++ A +L M G+ P TYT+LLEG + ++ A+
Sbjct: 462 VEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAY 521
Query: 526 EVF-------NKSVNHDVMLARSILSTFMISLCR 552
E+F KS + ++ S + LC+
Sbjct: 522 ELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCK 555
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 158/340 (46%), Gaps = 10/340 (2%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ V + C+ + +L E+R + S+ V +I+GFCK ++ A ++L E
Sbjct: 12 YNVVVNGLCKARLTSKAYEVLKEMRDGK-SVAPDLVTYSTVINGFCKQGEMDRACEILRE 70
Query: 252 LRIRE-CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL-GVAPRTNDYREFILGLIVE 309
+ R+ PD + Y V + G +R + ++ KL GV P + I G
Sbjct: 71 MVTRDGMAPDVVTYTSVVDGLCRDGK-MDRACEMVREMKLKGVEPDKFTFSALITGWCNA 129
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNF----MIEKGR-VPT 364
R++ EA +L + I++ +D +ALI + + R + F M E G P
Sbjct: 130 RKVDEALKLYKEILTSSCRLDAVSSSALITGLCR-ERRIGEAYELFQEMEMREDGAWKPD 188
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
+ T + L CK ++ +++ V+ ++ +Y+ ++ LC +G L +A + +
Sbjct: 189 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFR 248
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
M KG P+V Y +L+ C + A+ L D+M A+ C + +YN L+ + +G
Sbjct: 249 RMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLG 308
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
IE A +LF M K PD TYT L+ G C + L+ A
Sbjct: 309 RIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEA 348
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 80/153 (52%), Gaps = 2/153 (1%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKR-KGLDPDVSFYNSLMEACCRE-DLLRPAKKLWD 459
+YNV+V+ LC + +AY V++EM+ K + PD+ Y++++ C++ ++ R + L +
Sbjct: 11 TYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 70
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+ G + ++ TY ++ G+++ A + M KGV PD T+++L+ G C
Sbjct: 71 MVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNAR 130
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ A +++ + + L S + LCR
Sbjct: 131 KVDEALKLYKEILTSSCRLDAVSSSALITGLCR 163
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 97/220 (44%), Gaps = 20/220 (9%)
Query: 56 INPYLLTHHSLALGF-----FNWASQ------QPNFTHSPLSYHSILKSLSLSRQINAID 104
I+P ++T+ + G+ F A++ N + ++Y S++ L + ++N
Sbjct: 361 IDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAM 420
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
VLK V D Y +I L T++A ++ E+ + NS++ L
Sbjct: 421 EVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGAL 476
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
G +D A K+ M+ G+E + + + F ++ + + +R++ +
Sbjct: 477 CRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSS 536
Query: 225 GSVIA-----VLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ + +I G CK + +++A V++ELR REC+P
Sbjct: 537 AANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEP 576
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/408 (20%), Positives = 153/408 (37%), Gaps = 54/408 (13%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
LG PN ++Y S+L L + ++ + +++ + Y +I
Sbjct: 212 LGVMEGRKCVPNV----VTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIH 267
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
L A + +E+ C N+LL G I+ A ++F EM+ +
Sbjct: 268 GLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLP 327
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAF 246
I + + FC ++L + +L+ ++ I+ V+ +++ G+ + KR EA
Sbjct: 328 DRITYTCLVRGFCNASRLEEARFLLENMKTAAG--IDPDVVTYSIVVAGYSRAKRFVEAA 385
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
+ + E+ R P+ + Y + + G V VLK K P Y I GL
Sbjct: 386 EFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGL 441
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS------------------SIDP-- 346
R EA L E +V+ + N++IG++ ++P
Sbjct: 442 CGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGM 501
Query: 347 --------------RSAIVFFNFMIEKGRVPTLSTLSNLS---------KNLCKRNKSDE 383
R I + F + + + S+ +NL + LCK + D+
Sbjct: 502 VTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDK 561
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
+ V + L + + E +V L +GR EA +I + + GL
Sbjct: 562 AMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLE-KGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N +TYN++++ + A + M + K VAPD TY++++ G C++ + A E+
Sbjct: 8 NERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEI 67
Query: 528 FNKSVNHDVMLARSILSTFMI-SLCR 552
+ V D M + T ++ LCR
Sbjct: 68 LREMVTRDGMAPDVVTYTSVVDGLCR 93
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/512 (21%), Positives = 230/512 (44%), Gaps = 49/512 (9%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
KW P E+ L L LR + LV ++ + ++ + FF WA+++ N+ H +Y
Sbjct: 72 KWGPDAEKALEVLMLR--VDHWLVREIMKTDIGV--NVKMQFFRWAAKRRNYEHDTSTYM 127
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKI-TLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
+++ L + Q + +++++ N I + + ++ L K KA ++F ++K
Sbjct: 128 ALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKT 187
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF-STIGFGVFIWKFCENAKLG 206
+ NS++ +L +G + ++++EMS G F T+ + I FC+ +
Sbjct: 188 RKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRD 247
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ +L+E++ +N M + I +++ F K V A + +E+R + C+PD Y
Sbjct: 248 SAIQLLNEMK--DNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYT- 304
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
E++ R LG A R ++ F + +R C
Sbjct: 305 --------------ELI----RGLGKAGRIDEAYHFFYEM--QREGCRP----------- 333
Query: 327 FTIDDDVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK-RNKSD 382
D V+N +I G +D A+ F M +P++ T + + K L + ++++
Sbjct: 334 ---DTIVMNNMINFLGKAGRLD--DAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRAS 388
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E+ ++ + + +Y++++ C + R+ +A +++EM KG P + Y SL+
Sbjct: 389 EVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLI 448
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+A + A +L+ ++ + S + + Y ++I + G ++ A+ +F M + G A
Sbjct: 449 DALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCA 508
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
PD Y +L+ GL + L A + H
Sbjct: 509 PDVYAYNALMSGLARTGMLDEALSTMRRMQEH 540
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/514 (21%), Positives = 224/514 (43%), Gaps = 55/514 (10%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL FF+ + T S S++ +L L+ + + + S+ Q++++ ++ D ++
Sbjct: 53 ALHFFHLMMRSTP-TPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILL 111
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRG 184
L ++ F+ F + P I N+L+ L + I A ++F M G
Sbjct: 112 NCLCNVNRLREGFAAFAGILR--RGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG 169
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVL----SMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
+ +G I C + L ML+++ + E + + +I+ G CK
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229
Query: 241 RVEEAFKVLDELRIRE----------CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
R +EA ++ +E++ + +PD + + ++ + G V E + +L +
Sbjct: 230 REDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES 289
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSA 349
G+ P Y I G + + A+EL + S D N LI S ++ A
Sbjct: 290 GIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEA 349
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKN----------------------------------- 374
+ +N M+ G+ P + T +L K
Sbjct: 350 MKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDG 409
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK + E ++++ L ++++ ++E+ N ++ LC +G+L A+ + +++ +G +P+
Sbjct: 410 LCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPN 469
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V Y ++ CRE + A L +M A+GC+ ++ TYN L+ F E ++E ++L H
Sbjct: 470 VVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLH 529
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
M +K V+PDA T + +++ L ++ Q +
Sbjct: 530 RMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 563
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 169/401 (42%), Gaps = 32/401 (7%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ LA + ++++M G+ + + C +L + + + +
Sbjct: 73 NHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILR 132
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R S V +I G C R+ EA ++ ++ C PD + Y + + G++
Sbjct: 133 RGYS--PNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNI 190
Query: 278 -----FEREVVLKKKR-KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
+E++ R ++ P Y + GL R EAK+L E
Sbjct: 191 NIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFE----------- 239
Query: 332 DVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
+ ++ + N M+++G P + T + L LCK K E ++ V+
Sbjct: 240 -------------EMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVM 286
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+ D+ +YN ++ C G L A + M KG +PDV YN L+ + +
Sbjct: 287 IESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKV 346
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A KL+++M G N+ TY+ L+ G+++ A +LF M G+A ++ TY
Sbjct: 347 EEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIF 406
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L+GLC+ L A ++F + + + L L+ + LC+
Sbjct: 407 LDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCK 447
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 188/409 (45%), Gaps = 23/409 (5%)
Query: 157 CNSLL-AVLASDGYIDNALKMFDEM-SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
CN +L AV G +D AL++ ++ + G + + + + C + G+V +++E
Sbjct: 191 CNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEE 250
Query: 215 VRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+ R N LI + C+ E +VL ++ C PD Y V +
Sbjct: 251 M-VRVGCPPNVVTFNTLIGY-LCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKE 308
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G + +L + G+ P Y + GL R +A+EL + +DD
Sbjct: 309 GHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTF 368
Query: 335 NALI------GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
N L+ G V + I M+E G VP + T + + CK DE V +
Sbjct: 369 NILVDFFCQNGLVYRV-----IELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLL 423
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
K ++A + SY +++ LC++ R +A ++ +M +G P+ +N+++ C++
Sbjct: 424 KSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKK 483
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
L+ A +L QM +GCS +L +Y+ +I + G+ + AL L + M+ KG++P+ Y
Sbjct: 484 GLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 543
Query: 509 TSLLEGLCQETNLQAAFEVFNK----SVNHDVMLARSILSTFMISLCRR 553
+S+ L +E + ++F+ ++ D +L +++S SLC+R
Sbjct: 544 SSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVIS----SLCKR 588
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/449 (20%), Positives = 192/449 (42%), Gaps = 42/449 (9%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY+++LK L ++++ + +++++ + + +I L + ++ V +
Sbjct: 226 VSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQ 285
Query: 145 -VKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
V C P+I ++L + +G+++ A ++ D M G++ + + + + C
Sbjct: 286 MVDHGCT---PDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCS 342
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ Q +L E+ +N V +++ FC+ V ++L+++ C PD
Sbjct: 343 AERWEQAEELLAEMF--DNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDV 400
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
I Y V F G + E ++LK G P T Y + GL R +A++L
Sbjct: 401 ITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDL--- 457
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
+ MIE+G P T + + LCK+
Sbjct: 458 -------------------------------MSQMIEQGCSPNPVTFNTVINFLCKKGLV 486
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
++ +E+ K + N D+ SY+ ++ L +G+ EA ++ M KG+ P+ Y+S+
Sbjct: 487 EQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSI 546
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
A +E + +++D + + YN +IS + G + A+ M+ G
Sbjct: 547 ASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGC 606
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNK 530
P+ +TYT L+ GL E ++ A E+ +
Sbjct: 607 MPNESTYTILIRGLASEGFVKEAQEMLTE 635
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 173/426 (40%), Gaps = 73/426 (17%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG---QVLSMLDEVRKREN 220
L + G I +AL + DEM RG + V + C G + +L ++ R
Sbjct: 125 LCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGC 184
Query: 221 SMINGSVIAVLIIHGFC-KGKRVEEAFKVLDELRIR-ECKPDFIAYRIVAEEFKLMGSVF 278
++ G+ L+++ C +G V+EA ++L +L C PD ++Y V + +
Sbjct: 185 ALDVGN--CNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWG 242
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
+ ++++ ++G P + I G + +G F VL ++
Sbjct: 243 RVQDLMEEMVRVGCPPNVVTFNTLI---------------GYLCRNGLFERVHQVLAQMV 287
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRV----------------PTLSTLSNLSKNLCKRNKSD 382
+ D R + + ++G + P + + + K LC + +
Sbjct: 288 DHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWE 347
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
+ E+ + ND D ++N++V F C +G + ++++M G PDV Y +++
Sbjct: 348 QAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVI 407
Query: 443 EACCREDLL---------------RP--------------------AKKLWDQMFASGCS 467
C+E L+ RP A+ L QM GCS
Sbjct: 408 NGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCS 467
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N T+N +I+ + G +E A+ L ML G +PD +Y+++++GL + A E+
Sbjct: 468 PNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALEL 527
Query: 528 FNKSVN 533
N VN
Sbjct: 528 LNVMVN 533
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 157/368 (42%), Gaps = 10/368 (2%)
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK---GKRVEEAFKVLDEL 252
+ C ++ LS+LDE+R+R + I + +I+ C G A +VL +L
Sbjct: 122 VRALCARGRIADALSVLDEMRRRGCAPI--PPMYHVILEAACSRGGGGGFRSAVRVLQDL 179
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK--KRKLGVAPRTNDYREFILGLIVER 310
R C D +V G + + L + G P Y + GL + +
Sbjct: 180 HGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAK 239
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGSV--SSIDPRSAIVFFNFMIEKGRVPTLSTL 368
R ++L E +V + N LIG + + + R V M++ G P +
Sbjct: 240 RWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQ-MVDHGCTPDIRMY 298
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ + +CK + E+ + + ++ YN ++ LC++ R +A ++ EM
Sbjct: 299 ATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFD 358
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
D +N L++ C+ L+ +L +QM GC ++ TY +I+ F + G I+
Sbjct: 359 NDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDE 418
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
A+ L +M G P+ +YT +L+GLC A ++ ++ + +T +
Sbjct: 419 AVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVIN 478
Query: 549 SLCRRVLI 556
LC++ L+
Sbjct: 479 FLCKKGLV 486
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE---DLLRPAKKLW 458
+Y +V LC GR+ +A V+ EM+R+G P Y+ ++EA C R A ++
Sbjct: 117 TYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVL 176
Query: 459 DQMFASGCSGNLKTYNILISKFSEV-GEIEGALRLFHNMLEK-GVAPDATTYTSLLEGLC 516
+ GC+ ++ N++++ + G ++ ALRL ++ G PD +Y ++L+GLC
Sbjct: 177 QDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLC 236
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/495 (23%), Positives = 234/495 (47%), Gaps = 24/495 (4%)
Query: 70 FFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKV-NKITLDSSVYRFIIPS 128
F A + +F + S++++ + +++ +L ++++ N++ ++ S FI+
Sbjct: 63 MFKSAPKMGSFKLGDSTLSSMIENYANLGDFASVEKLLSRIRLENRVIIERS---FIVVF 119
Query: 129 LIQGKN--TQKAFSVFNEV--KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
GK +KA +F+ + +F C+ NS+L V+ ++G L+ +D + +
Sbjct: 120 RAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSF-NSVLNVIINEGLYHRGLEFYDYVVNSN 178
Query: 185 VEFST----IGFGVFIWKFCENAKLGQVLSMLDEVRKR-ENSMINGSVIAVLIIHGFCKG 239
+ + + F + I C KLG V ++ R E + ++ G CK
Sbjct: 179 MNMNISPNGLSFNLVIKALC---KLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKE 235
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+R++EA +LDE++ C P + Y ++ + G + ++ G P Y
Sbjct: 236 ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTY 295
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDD----DVLNALIGSVSSIDPRSAIVFFNF 355
I GL ++ ++ +A L E +VS K +D ++N L+ ++D ++
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLIS--- 352
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M E+G S L L K K++E + ++K ++ ++ Y+ ++ LC G+
Sbjct: 353 MEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGK 412
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
EA ++ M G P+V Y+SLM+ + L A ++W +M +GCS N Y++
Sbjct: 413 PNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSV 472
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI VG ++ A+ ++ ML G+ PD Y+S+++GLC ++ AA +++++ + +
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQE 532
Query: 536 VMLARSILSTFMISL 550
++ + T+ I L
Sbjct: 533 EPKSQPDVVTYNILL 547
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 177/397 (44%), Gaps = 10/397 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N ++ L G++D A+++F M + + + C+ ++ + + +LDE++
Sbjct: 191 NLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQS 250
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
S VI ++I G CK + K++D + ++ C P+ + Y + L G +
Sbjct: 251 EGCS--PSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKL 308
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ +L++ P Y I GL+ +RR + L + + ++ + + L
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVL 368
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G A+ + M EKG P + S + LC+ K +E E+ + ++
Sbjct: 369 ISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGC 428
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ +Y+ ++ +G EA V +EM G + Y+ L++ C ++ A
Sbjct: 429 LPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMM 488
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML---EKGVAPDATTYTSLLE 513
+W +M G + Y+ +I +G ++ AL+L+H ML E PD TY LL+
Sbjct: 489 VWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLD 548
Query: 514 GLCQETNLQAAFEVFN----KSVNHDVMLARSILSTF 546
GLC + ++ A ++ N + + DV+ + L+T
Sbjct: 549 GLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTL 585
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 178/404 (44%), Gaps = 8/404 (1%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
+ +I +L + +A VF + + C G C +L+ L + ID A+ + DEM
Sbjct: 190 FNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYC-TLMDGLCKEERIDEAVLLLDEM 248
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
G S + + V I C+ L +V ++D + + V +IHG C
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLK--GCFPNEVTYNTLIHGLCLKG 306
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
++++A +L+ + +C P+ + Y + + +L + G + Y
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYS 366
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK 359
I GL E + EA L + + + V +A+I G P A N MI
Sbjct: 367 VLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISS 426
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G +P + T S+L K K S+E ++V++ + + Y+V++ LC GR++EA
Sbjct: 427 GCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEA 486
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS---GCSGNLKTYNIL 476
V +M G+ PD Y+S+++ C + A KL+ +M ++ TYNIL
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNIL 546
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
+ ++ A+ L + ML++G PD T + L L ++++
Sbjct: 547 LDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSD 590
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK----TYNILISKFSEVGEIEGAL 490
V +NS++ E L + +D + S + N+ ++N++I ++G ++ A+
Sbjct: 148 VKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAI 207
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
+F M EK PD TY +L++GLC+E + A + ++ + + I + + L
Sbjct: 208 EVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGL 267
Query: 551 CRR 553
C++
Sbjct: 268 CKK 270
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/527 (22%), Positives = 226/527 (42%), Gaps = 59/527 (11%)
Query: 30 WTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHS 89
W P E L L + P V V+ L + A+ +F W ++ H P SY+S
Sbjct: 48 WGPSAENALSALNFKPQ--PEFVIGVLRR--LKDVNRAIEYFRWYERRTELPHCPESYNS 103
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF-NEVKFN 148
+L ++ R +A+D +L ++ V + ++ S ++ ++ F V N KF
Sbjct: 104 LLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFK 163
Query: 149 CEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
P +L+ ++ + D L +F +M G E + F I F + ++
Sbjct: 164 ---FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVD 220
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR- 265
LS+LDE++ +S+ V+ + I F K +V+ A+K E+ KPD + Y
Sbjct: 221 SALSLLDEMKS--SSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 266 ---IVAEEFKLMGSV--FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
++ + +L +V FE L+K R++ P T Y I+G
Sbjct: 279 MIGVLCKANRLDEAVEMFEH---LEKNRRV---PCTYAYNTMIMGY-------------- 318
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
GS D A KG +P++ + + L K K
Sbjct: 319 ------------------GSAGKFD--EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 358
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
DE + V++ + D ++ +YN+++ LC +G+L A+ + M++ GL P+V N
Sbjct: 359 VDEALRVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNI 417
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+++ C+ L A +++QM C+ + T+ LI +VG ++ A +++ ML+
Sbjct: 418 MVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSD 477
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
++ YTSL++ + +++ VN + +L+T+M
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYM 524
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 199/448 (44%), Gaps = 10/448 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y S++ L + +++ + + ++ N+ + Y +I +A+S+
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV-EFSTIGFGVFIWKFCENA 203
+ N +L L G +D AL++F+EM ST + + I C
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAPNLST--YNILIDMLCRAG 391
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
KL + D ++K + +++ CK ++++EA + +++ + C PD I
Sbjct: 392 KLDCAFELRDSMQKA--GLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEIT 449
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND--YREFILGLIVERRICEAKELGEV 321
+ + + +G V + + +K L RTN Y I R + ++ +
Sbjct: 450 FCSLIDGLGKVGRVDDAYKIYEKM--LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 322 IVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+V+ + D +LN + + + +P F + + VP + S L L K
Sbjct: 508 MVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGF 567
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
++E E++ + D +YN+++ C G++ +AY +++EMK KG +P V Y S
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+++ + D L A L+++ + N+ Y+ LI F +VG I+ A + +++KG
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ P+ T+ SLL+ L + + A F
Sbjct: 688 LTPNVYTWNSLLDALVKAEEINEALVCF 715
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/493 (20%), Positives = 211/493 (42%), Gaps = 13/493 (2%)
Query: 61 LTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS 120
+ H + L F Q+ + + + ++++ + ++++ S+L ++K + + D
Sbjct: 181 VNHSDMMLTLFQ-QMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
+Y I S + A+ F+E++ N S++ VL +D A++MF+ +
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
T + I + K + S+L+ R+R I + I+ K
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE--RQRAKGSIPSVIAYNCILTCLRKMG 357
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+V+EA +V +E++ ++ P+ Y I+ + G + + +K G+ P
Sbjct: 358 KVDEALRVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVN 416
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---GSVSSIDPRSAIVFFNFMI 357
+ L +++ EA + E + T D+ +LI G V +D A + M+
Sbjct: 417 IMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVD--DAYKIYEKML 474
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+ ++L KN + ++ ++YK + + D++ N + + +G
Sbjct: 475 DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPE 534
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+ + +E+K + PD Y+ L+ + +L+ M GC + + YNI+I
Sbjct: 535 KGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVN 533
F + G++ A +L M KG P TY S+++GL + L A+ +F +K +
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654
Query: 534 HDVMLARSILSTF 546
+V++ S++ F
Sbjct: 655 LNVVIYSSLIDGF 667
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/486 (20%), Positives = 206/486 (42%), Gaps = 49/486 (10%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y++++ + + + S+L++ + Y I+ L + +A VF E+
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM 369
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
K +D P + N L+ +L G +D A ++ D M G+ + + + + C++
Sbjct: 370 K---KDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
KL + ++ +++ + + +I G K RV++A+K+ +++ +C+ + I
Sbjct: 427 KLDEACAIFEQMDYK--VCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIV 484
Query: 264 YRIVAEEF-----KLMGSVFEREVV---------------------------------LK 285
Y + + F K G +++V +K
Sbjct: 485 YTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSI 344
+R P Y I GLI E EL + +D N +I G
Sbjct: 545 SRR---FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCG 601
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
A M KG PT+ T ++ L K ++ DE +++ + ++ Y+
Sbjct: 602 KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
++ GR+ EAY +++E+ +KGL P+V +NSL++A + + + A + M
Sbjct: 662 SLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEL 721
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
C+ N TY ILI+ +V + A + M ++G+ P +YT+++ GL + N+ A
Sbjct: 722 KCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781
Query: 525 FEVFNK 530
+F++
Sbjct: 782 GALFDR 787
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/438 (19%), Positives = 189/438 (43%), Gaps = 7/438 (1%)
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
++ L S++++ ++ +Q+ T D + +I L + A+ ++ ++ +
Sbjct: 418 MVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSD 477
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ SL+ + G ++ K++ +M ++ ++ + + +
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGR 537
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+M +E++ R + + ++IHG K E +++ ++ + C D AY IV +
Sbjct: 538 AMFEEIKSRR--FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVID 595
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
F G V + +L++ + G P Y I GL R+ EA L E S + +
Sbjct: 596 GFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 655
Query: 330 DDDVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
+ + ++LI G V ID A + +++KG P + T ++L L K + +E +
Sbjct: 656 NVVIYSSLIDGFGKVGRID--EAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALV 713
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
++ + + +Y ++++ LC + +A+ QEM+++G+ P Y +++
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLA 773
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ + A L+D+ A+G + YN +I S A LF +G+
Sbjct: 774 KAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNK 833
Query: 507 TYTSLLEGLCQETNLQAA 524
T LL+ L + L+ A
Sbjct: 834 TCVVLLDTLHKNDCLEQA 851
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 144/350 (41%), Gaps = 42/350 (12%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR- 218
L+ L G+ + ++F M +G T + + I FC+ K+ + +L+E++ +
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 219 -ENSMIN-GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E +++ GSVI G K R++EA+ + +E + + + + + Y + + F +G
Sbjct: 618 FEPTVVTYGSVI-----DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGR 672
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ E ++L++ + G+ P + + L+ +A+E+ E
Sbjct: 673 IDEAYLILEELMQKGLTPNVYTWNSLLDALV------KAEEINE---------------- 710
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
A+V F M E P T L LCK K ++ ++ +
Sbjct: 711 ------------ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
SY M+S L +G + EA + K G PD + YN+++E + A
Sbjct: 759 KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFS 818
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
L+++ G + KT +L+ + +E A + + E G A A
Sbjct: 819 LFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKARHAA 868
>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 629
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 123/572 (21%), Positives = 225/572 (39%), Gaps = 100/572 (17%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQV-KVNKITLDSSVYRFI 125
AL F WAS P FTHS +Y ++++ L + + + +L ++ D ++ +
Sbjct: 55 ALQTFKWASNLPKFTHSQSTYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTV 114
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLA-------------------- 165
I L + + V + + ++ +I NS+L VL
Sbjct: 115 IRGLGRARMIPHVIKVLDLISKFGKNPSLKIFNSILDVLVKVDIDVAREFYRKQMMGSGV 174
Query: 166 -SDGY--------------IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS 210
D Y I + ++ M RGV+ + + + + C+N K+G+ S
Sbjct: 175 QGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRARS 234
Query: 211 MLDEVR---------------KREN--------------SMINGSVIAVLIIHGFCKGKR 241
++DE+ K EN + V ++ C R
Sbjct: 235 LMDEIEEPNDVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGR 294
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
V EA ++L+ + + D +AY + F +G + LK+ + G P Y
Sbjct: 295 VTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNI 354
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLN-----ALIGSVSSIDPRSAIVFFNFM 356
I G C+ SG F + D+ N + + + D +FF
Sbjct: 355 LISGF------CD---------SGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFGGR 399
Query: 357 IEK-------------GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
IE+ G +S +++ L K+N DE +E ++ F
Sbjct: 400 IEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALEF--LMKMEKLFPRAVDR 457
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
++ + C G ++ A V +M +G P++ Y+ L+ C+E LR A +L ++M
Sbjct: 458 SLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMVG 517
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G +N LI F G+ E AL+L +M+ +G PD TY+ L++ LC++ N Q
Sbjct: 518 HGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQK 577
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
A +FN+ + + S ++ +I L + ++
Sbjct: 578 ALSIFNQMIEKGITPDSSTWNSLLIRLSKEII 609
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/466 (24%), Positives = 200/466 (42%), Gaps = 24/466 (5%)
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSL 160
NA+D V Q K + L + F++ L + + S+F E+K GP N
Sbjct: 197 NAVD-VFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMK----STGPPP-NVF 250
Query: 161 LAVLASDGY---------ID--NALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ + Y ID A ++ +EM G + + + +I+ C ++G V
Sbjct: 251 TYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLC---RVGYVE 307
Query: 210 SMLDEVRK--RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
S LD VR N ++N IIHG CK ++EA KVL+E++ PD Y I+
Sbjct: 308 SALDFVRSLISANGLVNVYCYNA-IIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSIL 366
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
F G V + ++++ + + P Y GL +R + ++ + + +
Sbjct: 367 IHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGY 426
Query: 328 TIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
D + LI G D SA M+ P S +L CK +E
Sbjct: 427 KYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALE 486
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
+ ++ + + NV++ C GR+ EA ++ EM+ +G+ P++ YN+++ C
Sbjct: 487 FFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLC 546
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+E A +L+ M ++ Y+ LI F++ + AL L+ ML+ GV PD
Sbjct: 547 KERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMV 606
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
YT L+ LC + + A+ +F K + + + ++ + CR
Sbjct: 607 AYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCR 652
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 200/440 (45%), Gaps = 8/440 (1%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y++I+ L +++ VL+++K I+ D Y +I + + +K + E+K
Sbjct: 328 YNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMK 387
Query: 147 FNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ ++ P + + SL L D +L +F ++ G ++ + + I FC
Sbjct: 388 YS--NMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGD 445
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L +++E+ R N + S L+ HGFCK A + + + P
Sbjct: 446 LDSAHKLMEEM-VRNNLAPDPSNFESLV-HGFCKMGLWVNALEFFNMMLEGGILPSIATC 503
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
++ + G V E ++ + + G+ P Y I L ER+ A EL +++
Sbjct: 504 NVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLK 563
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
V + LI G + + A++ + M++ G P + + L LC R++ E
Sbjct: 564 RNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCE 623
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
++K ++ N D SY +++ C G +R+A+ + EM ++G P V Y SL++
Sbjct: 624 AYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVD 683
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C+ + + A L D+M G + ++ TYN+LI+ G ++ AL + + M E GV P
Sbjct: 684 GYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLP 743
Query: 504 DATTYTSLLEGLCQETNLQA 523
D TY +LE L + L+
Sbjct: 744 DHMTYM-MLEWLLKAKKLKT 762
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 180/418 (43%), Gaps = 42/418 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR- 216
N+++ L G +D ALK+ +EM G+ + + I FC+ + + L +++E++
Sbjct: 329 NAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKY 388
Query: 217 -KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E S+++ S + HG CK + + + + +L K D AY I+ + F + G
Sbjct: 389 SNMEPSLVSYSSL----FHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQG 444
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ ++++ + +AP +++ + G A E +++ G N
Sbjct: 445 DLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCN 504
Query: 336 ALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL--- 391
+I + A+ N M +G P L T + + LCK KS+ +E++ ++
Sbjct: 505 VIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKR 564
Query: 392 ----SANDYFT----------------------------DMESYNVMVSFLCTSGRLREA 419
S Y T DM +Y ++++ LC R+ EA
Sbjct: 565 NVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEA 624
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
Y + ++M G+ PD Y S++ CR +R A L+++M G + TY L+
Sbjct: 625 YNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDG 684
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ ++ I+ A L M KG+ PD TY L+ + NL A E+ N+ + V+
Sbjct: 685 YCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVL 742
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 220/491 (44%), Gaps = 42/491 (8%)
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQV--KVNKITLDSSVYRFIIPS 128
F+ ++ F+ S ++ +++ L+L+ + ++L+ + NK+ LD+ + P
Sbjct: 111 FSTTMKKYGFSRSIDAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVNLDAFE---LFPI 167
Query: 129 LIQG-KNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
L++ K+ ++ VF+ L+ V A++ ++NA+ +F + G+E
Sbjct: 168 LLESPKDAARSVIVFD---------------LLIKVFAANSMLENAVDVFLQAKKTGLEL 212
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE---- 243
ST F+ K A + L L E K N +++ + +CKG E
Sbjct: 213 STRSCN-FLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMM-NFYCKGNFGEADID 270
Query: 244 --EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND--- 298
+A ++L+E+ P + Y +G V E L R L A +
Sbjct: 271 TRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYV---ESALDFVRSLISANGLVNVYC 327
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMI 357
Y I GL + + EA ++ E + S + D + LI G D + M
Sbjct: 328 YNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMK 387
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
P+L + S+L LCK+ SD +++++ L A Y D +Y++++ C G L
Sbjct: 388 YSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLD 447
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
A+ +++EM R L PD S + SL+ C+ L A + ++ M G ++ T N++I
Sbjct: 448 SAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVII 507
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
G +E AL L + M +G+ P+ TY +++ LC+E + A E+F +M
Sbjct: 508 DAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELF------PLM 561
Query: 538 LARSILSTFMI 548
L R++L + ++
Sbjct: 562 LKRNVLPSVVV 572
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 192/452 (42%), Gaps = 38/452 (8%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
V+ +I + +Q + ++ F ++ + CN+LL + G++D A K++++
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
G + + + C++ KL V L E+ E + V +++ +C+
Sbjct: 216 VKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEME--EKGVYADLVTYNTLVNAYCRRG 273
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
V EAF ++D + + KP Y + GS + VL + +G+ P +
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333
Query: 301 EFILGLIVERRICEAK-----------------------------ELGEVI-----VSGK 326
++ + + EA+ ELG + + G
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393
Query: 327 FTIDDDVLNALI--GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ D V+ ++ G + D A+ N M+E+G V + T + L LC+ D+
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDA 453
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
E++K + F D + ++ C G + +A + + M + L PDV YN+LM+
Sbjct: 454 DELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDG 513
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C+ + AK+LW M + + +++ILI+ F +G + A RL+ M EKG+ P
Sbjct: 514 FCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPT 573
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
T ++++G + NL A + N ++ V
Sbjct: 574 LVTCNTIIKGYLRAGNLSKANDFLNTMISEGV 605
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 166/372 (44%), Gaps = 9/372 (2%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A ++F+EM RGV I F + F N +LG+ L+ ++++ ++ +VI ++
Sbjct: 348 AERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV--GLVPDTVIYTIL 405
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I+G+C+ V A K+ +E+ R C D + Y + + + + + K+ + GV
Sbjct: 406 INGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGV 465
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIV 351
P I G + + +A L E + D N L+ + + A
Sbjct: 466 FPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKE 525
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
+ MI + P+ + S L C E ++ + + + N ++
Sbjct: 526 LWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYL 585
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+G L +A + M +G+ PD YN+L+ + +E+ A L + M G NL
Sbjct: 586 RAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLV 645
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
TYN ++ FS G ++ A + H M++KG+ PD +TYTSL+ G + N++ AF V
Sbjct: 646 TYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRV---- 701
Query: 532 VNHDVMLARSIL 543
HD ML R +
Sbjct: 702 --HDEMLQRGFV 711
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 117/244 (47%), Gaps = 1/244 (0%)
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTL 368
R++ E E +++ F + + NAL+G++ + A + ++ G + + TL
Sbjct: 168 RKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTL 227
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ + LCK K D + + + D+ +YN +V+ C G + EA+G++ M
Sbjct: 228 NIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAG 287
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
KGL P + YN+L+ C+E AK++ D+M G N T+N ++ + ++
Sbjct: 288 KGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWE 347
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
A R+F+ ML++GV PD +++S++ + L A F K ++ I + +
Sbjct: 348 AERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILIN 407
Query: 549 SLCR 552
CR
Sbjct: 408 GYCR 411
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 176/388 (45%), Gaps = 18/388 (4%)
Query: 127 PSLIQG---KNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMS 181
P L++ ++ +A VFNE+ + P++ + S++ V + +G + AL F++M
Sbjct: 334 PMLVESCRKEDVWEAERVFNEML--QRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMK 391
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL----IIHGFC 237
G+ T+ + + I +C N + L M +E+ +R G V+ V+ +++G C
Sbjct: 392 GVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVER------GCVMDVVTYNTLLNGLC 445
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
+GK +++A ++ E+ R PDF + + G++ + + + + P
Sbjct: 446 RGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVV 505
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFM 356
Y + G + +AKEL ++S + + LI S+ S A ++ M
Sbjct: 506 TYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEM 565
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
EKG PTL T + + K + + + + + D +YN +++
Sbjct: 566 KEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENF 625
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
A+ +I M+ +GL P++ YN+++ R ++ A+ + +M G + + TY L
Sbjct: 626 DRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSL 685
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPD 504
I+ + ++ A R+ ML++G PD
Sbjct: 686 INGYVSKDNMKEAFRVHDEMLQRGFVPD 713
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 153/354 (43%), Gaps = 3/354 (0%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+S+ SI+ S + ++ + +++K + D+ +Y +I + + A + NE
Sbjct: 365 ISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNE 424
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + N+LL L +D+A ++F EM RGV I +C++
Sbjct: 425 MVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGN 484
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ + LS+ + + R S+ V ++ GFCK +E+A ++ ++ RE P +I++
Sbjct: 485 MTKALSLFETMTLR--SLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISF 542
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
I+ F +G V E + + ++ G+ P I G + + +A + ++S
Sbjct: 543 SILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMIS 602
Query: 325 GKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
D N LI S V + A N M E+G +P L T + + + + E
Sbjct: 603 EGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQE 662
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
V + D +Y +++ + ++EA+ V EM ++G PD F
Sbjct: 663 AEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPDDKF 716
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 155/324 (47%), Gaps = 2/324 (0%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+++ C R+EEA V+ ++R C P+ + Y + F G + E V+ R+
Sbjct: 15 ILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREE 74
Query: 291 GVA-PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RS 348
G A P + + GL R+ A+++ + +V D N L+ +
Sbjct: 75 GNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHE 134
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
++ F+ M ++G VP + T ++L CK ++ V + + + ++ ++
Sbjct: 135 SLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID 194
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C G L +A ++EM++ G+ P V YN+L+ C+ + A++L +M A
Sbjct: 195 GFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP 254
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TY+ +IS + +VG ++ A +L ML+KGV PDA TY+SL+ GLC+E L A E+F
Sbjct: 255 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELF 314
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
+ V +T + C+
Sbjct: 315 ENMLQLGVQPDEFTYTTLIDGHCK 338
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 168/379 (44%), Gaps = 2/379 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L + G ++ A+ + +M G + + + + FC +L ++ +R+
Sbjct: 14 NILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMRE 73
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
N+ N V +++G CK R+E A KV DE+ PD ++Y + + +G +
Sbjct: 74 EGNAKPN-LVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCL 132
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E V + + G+ P + I + +A L + +++ AL
Sbjct: 133 HESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTAL 192
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G A++ M + G P++ + L CK + D E+ + + A
Sbjct: 193 IDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRV 252
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ +Y+ ++S C G L A+ + Q+M +KG+ PD Y+SL+ C E L A +
Sbjct: 253 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 312
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L++ M G + TY LI + G +E AL L M+ KGV PD TY+ L+ GL
Sbjct: 313 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 372
Query: 517 QETNLQAAFEVFNKSVNHD 535
+ + A + K + D
Sbjct: 373 KSARTKEAHRLLFKLYHED 391
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 203/474 (42%), Gaps = 28/474 (5%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
+ +PN ++++S++ L + ++ V ++ + D Y ++ +
Sbjct: 75 GNAKPNL----VTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVG 130
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
++ +VF+E+ + P++ SL+ G ++ A+ + +M RG+ + +
Sbjct: 131 CLHESLAVFSEMTQ--RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 188
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLD 250
F I FC+ L L ++E+RK I SV+ +I+G+CK R++ A +++
Sbjct: 189 FTALIDGFCKKGFLDDALLAVEEMRK---CGIQPSVVCYNALINGYCKLGRMDLARELIR 245
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
E+ + KPD + Y + + +G++ + +K K GV P Y I GL E+
Sbjct: 246 EMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEK 305
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
R+ +A EL E ++ D+ LI G + A+ + MI KG +P + T S
Sbjct: 306 RLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS 365
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM------------VSFL---CTSG 414
L L K ++ E + L D D Y+ + V+ L C G
Sbjct: 366 VLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKG 425
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
++EA V Q M + D S Y+ L+ CR +R A QM SG S N +
Sbjct: 426 LMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTI 485
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
L+ E G + A ++L DA +L++ +E N+ A +V
Sbjct: 486 SLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVL 539
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 170/410 (41%), Gaps = 51/410 (12%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NS++ L G ++ A K+FDEM G+ + + + +C+ L + L++ E+ +
Sbjct: 85 NSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ 144
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R ++ V +IH CK +E+A ++ ++R R + + + + + + F G +
Sbjct: 145 R--GLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFL 202
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ + +++ RK G+ P Y I G R+ A+EL
Sbjct: 203 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL------------------- 243
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
M K P + T S + CK D ++ + +
Sbjct: 244 ---------------IREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVL 288
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D +Y+ ++ LC RL +A + + M + G+ PD Y +L++ C+E + A L
Sbjct: 289 PDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSL 348
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY--------- 508
D+M G ++ TY++LI+ S+ + A RL + + PD Y
Sbjct: 349 HDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSK 408
Query: 509 ------TSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+LL+G C + ++ A +V+ ++ + L S+ S + CR
Sbjct: 409 AEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCR 458
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 102/199 (51%), Gaps = 1/199 (0%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M+ G P + T + L + LC R + +E V V + + +YN +V+ C +G
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 416 LREAYGVIQEMKRKG-LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
L A V+ M+ +G P++ +NS++ C+ + A+K++D+M G + ++ +YN
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
L+S + +VG + +L +F M ++G+ PD T+TSL+ C+ NL+ A + +
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 535 DVMLARSILSTFMISLCRR 553
+ + + + C++
Sbjct: 181 GLRMNEVTFTALIDGFCKK 199
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 173/385 (44%), Gaps = 3/385 (0%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+++A +F+ M +G + + + I CE ++ + +++ ++R E+
Sbjct: 20 VNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMR--EDDCYPTVRTY 77
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+I+H + R EA + E+R R C+P+ Y ++ + E +L + +
Sbjct: 78 TVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVE 137
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRS 348
G+ P Y I G E + A+E+ +++ S ++ N LI G +
Sbjct: 138 KGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHR 197
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ + M+E P++ T ++L CK D + +++ N D +Y+V +
Sbjct: 198 AMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFID 257
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC GR+ EA + +K KG+ + Y +L++ C+ + A L D+M C
Sbjct: 258 TLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLP 317
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N TYN LI + +++ AL L +M++KG+ TYT L+ + +E + A +
Sbjct: 318 NSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRIL 377
Query: 529 NKSVNHDVMLARSILSTFMISLCRR 553
++ V+ I + F+ + C R
Sbjct: 378 DQMVSSGYQPDVYIYTAFIHAFCTR 402
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 174/408 (42%), Gaps = 9/408 (2%)
Query: 134 NTQKAFSVFNEV-KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
+ AFSVFN + K C N L+ L G +D + +F +M + +
Sbjct: 19 DVNSAFSVFNMMPKKGCRRNEVSYTN-LIHGLCEVGRVDEGINIFKKMREDDCYPTVRTY 77
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKR--ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD 250
V + E+ + + +++ E+R+R E ++ +V+ I+ CK ++EE ++LD
Sbjct: 78 TVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVM----INAMCKETKLEEGRRILD 133
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
E+ + P Y + + + G V + +L P Y E I G ++
Sbjct: 134 EMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKK 193
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLS 369
+ A L ++ + T N+LI I SA N M E G VP T S
Sbjct: 194 NVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYS 253
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
LCK+ + +E ++ L + Y ++ C +G++ +A ++ M +
Sbjct: 254 VFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTE 313
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
P+ S YN+L++ C+E ++ A L + M G + TY ILI + G+ + A
Sbjct: 314 DCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYA 373
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
R+ M+ G PD YT+ + C N++ A ++ + VM
Sbjct: 374 HRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVM 421
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 182/439 (41%), Gaps = 7/439 (1%)
Query: 95 SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGP 154
+L+ +N+ SV + + Y +I L + + ++F +++ +D P
Sbjct: 15 NLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMRE--DDCYP 72
Query: 155 EICNSLLAVLA--SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML 212
+ + V A G A+ +F EM RG E + + V I C+ KL + +L
Sbjct: 73 TVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRIL 132
Query: 213 DEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
DE+ E ++ +I G+CK VE A ++LD + C P+ Y + F
Sbjct: 133 DEMV--EKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFC 190
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
+V +L K + + P Y I G + A L ++ D
Sbjct: 191 RKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQW 250
Query: 333 VLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
+ I ++ A V FN + EKG + L CK K D+ + +
Sbjct: 251 TYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRM 310
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
D + +YN ++ LC +++EA +++ M +KGL V Y L+ A +E
Sbjct: 311 LTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDF 370
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A ++ DQM +SG ++ Y I F G I+ A + M E+GV PDA TYT +
Sbjct: 371 DYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLV 430
Query: 512 LEGLCQETNLQAAFEVFNK 530
++ L AF+V +
Sbjct: 431 IDAYGGLGLLNPAFDVLKR 449
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 180/425 (42%), Gaps = 32/425 (7%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ +G ++ A ++ D M + + I FC + + +++L ++
Sbjct: 148 NALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKML- 206
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E+ + V +IHG CK ++ A+++L+ + PD Y + + G +
Sbjct: 207 -ESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRI 265
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E V+ ++ G+ Y I G ++ +A L + +++ + NAL
Sbjct: 266 EEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNAL 325
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G + A++ MI+KG T+ T + L + K D + + ++ Y
Sbjct: 326 IDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGY 385
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ Y + CT G ++EA ++ M +G+ PD Y +++A LL PA
Sbjct: 386 QPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFD 445
Query: 457 LWDQMFASGCSGNLKTYNILISK-----------------------FSEVGEI------E 487
+ +MF +GC + TY+ LI F++V ++ E
Sbjct: 446 VLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFE 505
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
AL LF MLE G +P+ TY L+ GLC+ L A ++F+ V + +I ++ +
Sbjct: 506 TALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLL 565
Query: 548 ISLCR 552
C
Sbjct: 566 NCCCE 570
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 113/244 (46%), Gaps = 35/244 (14%)
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
D SA FN M +KG + +NL LC+ + DE + ++K + +D + + +Y
Sbjct: 19 DVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYT 78
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPD------------------------------ 434
V+V L SGR EA + EM+ +G +P+
Sbjct: 79 VIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEK 138
Query: 435 -----VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
V YN+L++ C+E ++ A+++ D M ++ C+ N +TYN LI F + A
Sbjct: 139 GLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRA 198
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
+ L MLE + P TY SL+ G C+ L +A+ + N + V+ + S F+ +
Sbjct: 199 MALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDT 258
Query: 550 LCRR 553
LC++
Sbjct: 259 LCKK 262
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/504 (21%), Positives = 201/504 (39%), Gaps = 85/504 (16%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y++++ + A +L + N + Y +I + KN +A ++ +++
Sbjct: 146 TYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKM 205
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ + P + NSL+ GY+D+A ++ + M+ GV + VFI C+
Sbjct: 206 LES--RLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKG 263
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
++ + + + ++ E + VI +I G+CK ++++A +LD + +C P+
Sbjct: 264 RIEEANVLFNSLK--EKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSST 321
Query: 264 Y----------RIVAEEFKLMGSVFEREV-------------------------VLKKKR 288
Y R V E LM S+ ++ + +L +
Sbjct: 322 YNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMV 381
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI----GSVSSI 344
G P Y FI I EA+++ ++ + + D + L+ G + +
Sbjct: 382 SSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFE-RGVMPDALTYTLVIDAYGGLGLL 440
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND-----YFTD 399
+P A M + G P+ T S L K+L K +EL + YK ++ D +F D
Sbjct: 441 NP--AFDVLKRMFDTGCDPSHHTYSCLIKHLLK----EELTKKYKNVALCDSIPNVFFAD 494
Query: 400 ----------------------------MESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
+ +Y ++ LC GRL A + M +G+
Sbjct: 495 VADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGV 554
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
P + YNSL+ CC + A +L M G L++ N+L E G E A
Sbjct: 555 SPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKV 614
Query: 492 LFHNMLEKGVAPDATTYTSLLEGL 515
+F N+L+ G D + L++GL
Sbjct: 615 VFSNLLQCGYNDDEVAWKILIDGL 638
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 94/504 (18%), Positives = 191/504 (37%), Gaps = 51/504 (10%)
Query: 12 RISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFF 71
R +I R + + LL + L L+PS V+ L H +G+
Sbjct: 180 RTYNELICGFCRKKNVHRAMALLSKMLES-----RLTPS----VVTYNSLIHGQCKIGYL 230
Query: 72 NWASQQPNFTH------SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
+ A + N + +Y + +L +I + + +K I + +Y +
Sbjct: 231 DSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTAL 290
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHR 183
I + A S+ + + ED P N+L+ L + + AL + + M +
Sbjct: 291 IDGYCKAGKMDDANSLLD--RMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQK 348
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G++ + + + I + +LD++ + I IH FC ++
Sbjct: 349 GLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVS--SGYQPDVYIYTAFIHAFCTRGNIK 406
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
EA ++ + R PD + Y +V + + +G + VLK+ G P + Y I
Sbjct: 407 EAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLI 466
Query: 304 LGLIVER--------RICEA------KELGEVIVSGKFTIDDDVLNALI--GSVSSIDPR 347
L+ E +C++ ++ +V KF ++ ++ G +I+
Sbjct: 467 KHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTY 526
Query: 348 SAIV--------------FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
+ ++ F+ M E+G P+ + ++L C+ + V + +
Sbjct: 527 AKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMME 586
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ + +ES NV+ L G +A V + + G + D + L++ + L
Sbjct: 587 HGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDG 646
Query: 454 AKKLWDQMFASGCSGNLKTYNILI 477
+L M A GC + +TY +LI
Sbjct: 647 CSELLGVMEARGCQIHPQTYRMLI 670
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 406 MVSFLCTSGRLREA---------YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
MV+ C G L EA + V M +KG + Y +L+ C +
Sbjct: 1 MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
++ +M C ++TY +++ E G A+ LF M E+G P+ TYT ++ +C
Sbjct: 61 IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+ET L+ + ++ V ++ + + + C+ ++
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMV 160
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 212/483 (43%), Gaps = 41/483 (8%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKV--NKITLDSSV-YRFIIPSLIQGKNTQKAF 139
SP S +LK + +R+ N++ + ++ + +++ S++ + F++ Q + +A
Sbjct: 118 SPKSVTQLLKEVVSTRK-NSVRDLFDELVLAHDRLQTKSTILFDFMVRFYCQLRMVDEAI 176
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
F +K D E CN +L++L+ I+NA + +M ++ + F + I
Sbjct: 177 ECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVL 236
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECK 258
C+ KL + L + E+ I +++ ++ G+ R+E A ++ E++ + +
Sbjct: 237 CKEGKLKKAKGFLGIM---ESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQ 293
Query: 259 PDFIAYRI-------------VAEEFKLMGSV------------------FEREVVLKKK 287
PD Y V E K +G V E + +
Sbjct: 294 PDLQTYNPILSWMCNEGRASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDE 353
Query: 288 R-KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSID 345
K G+ P Y I GL +E +I A+ L I +D N +I G D
Sbjct: 354 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGD 413
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
+ A + M+ G PT T ++L LC+RNK+ E E+++ + D+ N
Sbjct: 414 AKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNT 473
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++ C +G + A+ +++EM R +DPD YN LM C E A++L +M G
Sbjct: 474 LMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG 533
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+ +YN LIS +S+ G+ + A + ML G P TY +LL+GL + + + A
Sbjct: 534 IKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAE 593
Query: 526 EVF 528
E+
Sbjct: 594 ELL 596
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 3/207 (1%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+ A F M G PT+ T + L + R + + + + + + D+++YN +
Sbjct: 243 KKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPI 302
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+S++C GR E V++EMK GL PD YN L+ C L A D+M G
Sbjct: 303 LSWMCNEGRASE---VLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGM 359
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
TYN LI +IE A L + EKG+ D+ TY ++ G CQ + + AF
Sbjct: 360 VPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFA 419
Query: 527 VFNKSVNHDVMLARSILSTFMISLCRR 553
+ ++ + + + ++ + LCRR
Sbjct: 420 LHDEMMTDGIKPTQFTYTSLIYVLCRR 446
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 111/524 (21%), Positives = 208/524 (39%), Gaps = 81/524 (15%)
Query: 58 PYLLTHHSLAL---GFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNK 114
P +L H L G++ A++ +F + + S L ++ + +L+ +K ++
Sbjct: 7 PCILRHRISILSGAGYYPTAARLSSFAQTSTTTESQLPPIT-------SEVLLESIKSSQ 59
Query: 115 ITLDSSVYRFIIPSLIQG------KNTQKAFSVFNEVKFNCEDIGPE-ICNSLLAVLASD 167
V +IPSL+ K AF+ N + C D + + ++++ L+S
Sbjct: 60 WHFIEHVTDKLIPSLVSTTLLSLVKTPDLAFNFVNHIDLRCLDFQTQCLAIAVVSKLSSP 119
Query: 168 GYIDNALK------------MFDEM--SHRGVEF-STIGFGVFIWKFCENAKLGQVLSML 212
+ LK +FDE+ +H ++ STI F + +C+ L M+
Sbjct: 120 KSVTQLLKEVVSTRKNSVRDLFDELVLAHDRLQTKSTILFDFMVRFYCQ-------LRMV 172
Query: 213 DEVRK-----RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
DE + +E + I+ + R+E A+ ++ E K + + I+
Sbjct: 173 DEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIM 232
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
G + + + L G+ P Y + G + RI E +I+S
Sbjct: 233 INVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRI----EGARMIISE-- 286
Query: 328 TIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
M KG P L T + + +C ++ E++
Sbjct: 287 ----------------------------MKSKGFQPDLQTYNPILSWMCNEGRASEVLRE 318
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
K + D SYN+++ +G L A+ EM ++G+ P YN+L+
Sbjct: 319 MKGIG---LVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFM 375
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
E+ + A+ L ++ G + TYNI+I+ + + G+ + A L M+ G+ P T
Sbjct: 376 ENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFT 435
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
YTSL+ LC+ + A E+F K V + +++T M C
Sbjct: 436 YTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHC 479
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 186/400 (46%), Gaps = 9/400 (2%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK-- 217
LL+ ++ D + ++++M G+ + + + FC ++L LS L ++ K
Sbjct: 87 LLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLG 146
Query: 218 RENSMIN-GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E S++ GS +++GFC+G RV +A + D++ KP+ + Y + +
Sbjct: 147 HEPSIVTFGS-----LLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
V +L + K G+ P Y I GL R +A + + + D NA
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNA 261
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI V A F+ MI + P + T S L LC ++ DE E++ + +
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
F D+ +Y+++++ C S ++ + EM ++G+ + Y L++ CR L A+
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+++ +M G N+ TYN+L+ + G+IE AL + +M + G+ D TY ++ G+
Sbjct: 382 EIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGM 441
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
C+ + A++++ +M +T M+ L ++ L
Sbjct: 442 CKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGL 481
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 164/377 (43%), Gaps = 7/377 (1%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN LL + AL +M G E S + FG + FC ++ L M D++
Sbjct: 119 CNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV 178
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
VI II G CK K+V+ A +L+ + PD + Y + G
Sbjct: 179 GMGYK--PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ ++ K + P + I + E R+ EA+E E ++ D +
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 337 LIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
LI + S +D + F FM+ KG P + T S L CK K + ++++ +S
Sbjct: 297 LIYGLCMYSRLDEAEEM--FGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ +Y +++ C +G+L A + + M G+ P++ YN L+ C +
Sbjct: 355 RGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEK 414
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A + M +G ++ TYNI+I + GE+ A ++ ++ +G+ PD TYT+++
Sbjct: 415 ALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMML 474
Query: 514 GLCQETNLQAAFEVFNK 530
GL ++ + A +F K
Sbjct: 475 GLYKKGLRREADALFRK 491
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 157/352 (44%), Gaps = 11/352 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
SLL + +AL MFD+M G + + + + I C++ QV + LD + +
Sbjct: 155 GSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSK---QVDNALDLLNR 211
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E I V+ +I G C R +A +++ + RE PD + + + G
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
V E E ++ + + P Y I GL + R+ EA+E+ +VS D +
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G S + F M ++G V T + L + C+ K + E+++ +
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
++ +YNV++ LC +G++ +A ++ +M++ G+D D+ YN ++ C+ + A
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA- 450
Query: 456 KLWDQMFASGCSG---NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
WD + C G ++ TY ++ + G A LF M E G+ P+
Sbjct: 451 --WDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+FF+ M++ +P+++ S L + K K D ++ +++ + ++ + N++++
Sbjct: 68 LFFH-MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C +L A + +M + G +P + + SL+ CR D + A ++DQM G N+
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
YN +I + +++ AL L + M + G+ PD TY SL+ GLC
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC 232
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P ++ ++ L+ A + LW+QM G NL T NIL++ F ++ AL
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M++ G P T+ SLL G C+ + A +F++ V I +T + LC+
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/476 (23%), Positives = 201/476 (42%), Gaps = 4/476 (0%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F S S ++IL +L + + LK+ K LD + ++ SL KA
Sbjct: 190 GFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKA 249
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
S+ ++K NC N++L G +AL++ D+M G+E + + I K
Sbjct: 250 ESMLQKMK-NCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDK 308
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C+ + + +L R RE ++ +IHGF ++ A + +++ + K
Sbjct: 309 LCKLKRSARAYLLLK--RMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLK 366
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
P Y + + + G E VL + + GV P Y + G ++ A +L
Sbjct: 367 PSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDL 426
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ + S +I+ + LI + S A M+ G P + T S L +CK
Sbjct: 427 IKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCK 486
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
E E+ + + + Y +V + C +G +EA ++ R GL +
Sbjct: 487 MGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVI 546
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
+N+L+ + RE ++ A++ M S ++ ++N +I + + G + A ++ NM+
Sbjct: 547 HNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMV 606
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
G PD TY SLL GLCQ +L A E + + L+T ++ +C+
Sbjct: 607 RHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKH 662
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 196/451 (43%), Gaps = 15/451 (3%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAV 163
+LK+++ +T D Y +I A +FN++ + + P + +L+
Sbjct: 321 LLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLR--QSLKPSVATYTALIDG 378
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
+G D A ++ EM GV S + + + +C+++KLG L ++ +R R S I
Sbjct: 379 YCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSIS-I 437
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
N ++ +LI GFC+ V +A ++L + PD I Y + MG + E + +
Sbjct: 438 NRTMYTILI-DGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEI 496
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
L + +K GV P Y + EA + I + + NAL+ S
Sbjct: 497 LSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFY- 555
Query: 344 IDPRSAIV-----FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
R ++ F +M +++ + + + C+R E VY + + +
Sbjct: 556 ---REGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPP 612
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D+ +Y ++ LC G L +A + + K D N+L+ C+ L A L
Sbjct: 613 DICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLC 672
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
++M + TY IL+ F + G++ AL L MLEKG+ PD YT LL GL E
Sbjct: 673 EKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNE 732
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
++AA +F + + + + A I M++
Sbjct: 733 GQVKAASYMFQEIICKEGLYADCIAYNSMMN 763
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/496 (20%), Positives = 211/496 (42%), Gaps = 10/496 (2%)
Query: 43 LRDSLSPSLVA--RVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQI 100
LR SL PS+ +I+ Y + + Q S L+Y ++L ++
Sbjct: 361 LRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKL 420
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--N 158
++K ++ I+++ ++Y +I Q KA + + + I P++ +
Sbjct: 421 GPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCML--ADGIDPDVITYS 478
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L+ + G I ++ M GV + + + ++ FC+ + L ++ +
Sbjct: 479 ALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYR- 537
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+ ++ SVI ++ F + + EA + + + D ++ + + + G+V
Sbjct: 538 -SGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVL 596
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL- 337
E V + G P Y + GL + +AKE ++ ID+ LN L
Sbjct: 597 EAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLL 656
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
+G A+ M+ + +P T + L CKR K + + +++
Sbjct: 657 VGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLV 716
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEM-KRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D +Y +++ L G+++ A + QE+ ++GL D YNS+M + + ++
Sbjct: 717 PDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIER 776
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L M + + +YNIL+ + + G++ L L+ +M+++G+ PD TY L+ GLC
Sbjct: 777 LMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLC 836
Query: 517 QETNLQAAFEVFNKSV 532
+ ++ A + K V
Sbjct: 837 EYGLIEIAVKFLEKMV 852
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/412 (20%), Positives = 169/412 (41%), Gaps = 53/412 (12%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N ++ G + A ++D M G +G + C+ L Q + + +
Sbjct: 583 NCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLE 642
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ ++ ++ +L+ G CK ++EA + +++ R PD Y I+ + F G V
Sbjct: 643 KACAIDEKTLNTLLV--GICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKV 700
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNA 336
++L+ + G+ P T Y + GL+ E ++ A + E+I D N+
Sbjct: 701 VPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNS 760
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
++ N ++ G++ +E+ + + + N+
Sbjct: 761 MM---------------NGYLKGGQI-------------------NEIERLMRNMHENEV 786
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ SYN+++ G+L + ++M ++G+ PD Y L+ C L+ A K
Sbjct: 787 YPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVK 846
Query: 457 LWDQMFASGCSGNLKTYNILISKFSE----------------VGEIEGALRLFHNMLEKG 500
++M G + ++ILI FSE VG+I+GA L +M G
Sbjct: 847 FLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALG 906
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
V P +S++ GLC+ ++ A VF+ + ++ + +T M LC+
Sbjct: 907 VVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCK 958
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 187/465 (40%), Gaps = 61/465 (13%)
Query: 114 KITLDSSVYRFIIPSLIQGKNTQKAFSVF-NEVKFNCEDIGPEIC--------------- 157
KI+ D + + II S Q N +AFSV+ N V+ P+IC
Sbjct: 574 KISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWP---PDICTYGSLLRGLCQGGHL 630
Query: 158 ----------------------NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
N+LL + G +D AL + ++M R + T + +
Sbjct: 631 VQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTIL 690
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
+ FC+ K+ L +L + E ++ ++ +++G +V+ A + E+ +
Sbjct: 691 LDGFCKRGKVVPALILLQMML--EKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICK 748
Query: 256 E-CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
E D IAY + + G + E E +++ + V P + Y + G I + ++
Sbjct: 749 EGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSR 808
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
L +V D+ LI + A+ F M+ +G P L K
Sbjct: 809 TLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIK 868
Query: 374 NLCKRNKSDELVEVYKVL-------SANDYFTDMESYNV---------MVSFLCTSGRLR 417
+++K ++++ + A + DM++ V +V LC G++
Sbjct: 869 AFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVE 928
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
EA V + R G+ P ++ + +LM C+E + A L M + G ++ TYN+LI
Sbjct: 929 EAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLI 988
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
+ I AL L+ M KG+ P+ TTY +L + +Q
Sbjct: 989 TGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQ 1033
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 108/222 (48%), Gaps = 4/222 (1%)
Query: 331 DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
D ++NA + +D +AI F M E G +L + +N+ L NKS+ + K
Sbjct: 164 DLLVNAYVKEGKVLDAAAAIFF---MDECGFKASLFSCNNILNALVGINKSEYVWLFLKE 220
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ D+ + N++++ LCT G+L +A ++Q+MK L P+ YN+++ ++
Sbjct: 221 SLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGR 279
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ A ++ D M +G +L TYNI+I K ++ A L M E + PD +Y +
Sbjct: 280 CKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNT 339
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L+ G E + A +FN+ + + + + + + CR
Sbjct: 340 LIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCR 381
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 166/370 (44%), Gaps = 6/370 (1%)
Query: 157 CNSLLAVLASDGYIDNALKMF-DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
CN LL L A ++F DE+ + + + I + I FC+ + + +L E+
Sbjct: 72 CNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEM 131
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
++R +S V I+ C + A + E EC PD + + I+
Sbjct: 132 KERGHS--PDVVTHSSIVQALCNTGNLSRAMQYFRE--SVECAPDSVLFNILVHGLCKAN 187
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ E ++++ + G+ P Y I GL R+ EA++L E +V K + N
Sbjct: 188 QLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYN 247
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
LI G + A MI+ G P + T ++L C+++K D+ EV ++
Sbjct: 248 TLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKG 307
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ +YNV++S LC +GR EA ++ EM +G+ PD+ YNSL+ CR + A
Sbjct: 308 LCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQA 367
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++ + M G + +Y L + + A L NM + G P+ T+ SL+EG
Sbjct: 368 FQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEG 427
Query: 515 LCQETNLQAA 524
LC L A
Sbjct: 428 LCCSRRLDEA 437
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 109/498 (21%), Positives = 221/498 (44%), Gaps = 24/498 (4%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWA--SQQPNFTHSPLSYHSILKSLSLSRQINAI 103
+L P+ V RV+ ++ ++L FF W S + H+ + + +L++L +R+ +
Sbjct: 31 NLVPNTVGRVLQ--VIKDVDVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQA 88
Query: 104 -----DSVLKQ-VKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC 157
D +L Q N IT Y +I + + ++AF + E+K
Sbjct: 89 YQIFRDELLGQHCDTNHIT-----YNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTH 143
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFS--TIGFGVFIWKFCENAKLGQVLSMLDEV 215
+S++ L + G + A++ F E VE + ++ F + + C+ +L + M++E+
Sbjct: 144 SSIVQALCNTGNLSRAMQYFRE----SVECAPDSVLFNILVHGLCKANQLSEARQMIEEM 199
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+R ++ V +I G CK R+EEA ++L+ + R+ +P+ + Y + + G
Sbjct: 200 SER--GIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTG 257
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
++++ + G P + I G + +I +A E+ ++ G + N
Sbjct: 258 CTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYN 317
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
LI G + A + M +G +P + T ++L C+ + ++ ++ ++
Sbjct: 318 VLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVER 377
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D SY + L S R EA+ ++ M G P++ +NSLME C L A
Sbjct: 378 GVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEA 437
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+ L M GC TY +L++ + G ++ A + M+ +G+ P ++ +++
Sbjct: 438 RHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHT 497
Query: 515 LCQETNLQAAFEVFNKSV 532
L +E A F++ V
Sbjct: 498 LAREGKQDLALHYFDQVV 515
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 137/306 (44%), Gaps = 36/306 (11%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I GFCK +E AF++L E++ R PD + + + + G++ + + +
Sbjct: 111 LIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNL--SRAMQYFRESVE 168
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
AP + + + GL ++ EA+++ E
Sbjct: 169 CAPDSVLFNILVHGLCKANQLSEARQMIEE------------------------------ 198
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
M E+G VP + T ++L LCK + +E ++ + + ++ +YN ++ C
Sbjct: 199 ----MSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYC 254
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+G A+ +I+ M + G PDV +NSL+ C++ + A ++ M C+ NL
Sbjct: 255 KTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLV 314
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
TYN+LIS + G A L M +G+ PD TY SL+ C+ ++ AF++ N
Sbjct: 315 TYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLM 374
Query: 532 VNHDVM 537
V V+
Sbjct: 375 VERGVI 380
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 99/254 (38%), Gaps = 38/254 (14%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L++ L G + A ++ EM RG+ I + I FC N ++ Q + + + +
Sbjct: 317 NVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVE 376
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R +I + + K +R +EAF +LD + P+ + + E +
Sbjct: 377 R--GVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRL 434
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E +L R++G P + Y + GL R+ +AKE V+V
Sbjct: 435 DEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKE---VLV-------------- 477
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY-KVLSANDY 396
M+ +G P +S+ + L + K D + + +V++A
Sbjct: 478 -----------------MMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESK 520
Query: 397 FTDMESYNVMVSFL 410
D SY ++ F+
Sbjct: 521 ACD-PSYQKLLEFV 533
>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
salt-inducible-like protein from Arabidopsis thaliana
BAC gb|AL021637 [Arabidopsis thaliana]
gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 780
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 136/585 (23%), Positives = 254/585 (43%), Gaps = 63/585 (10%)
Query: 13 ISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFN 72
IS +IS + +P P LE L LS +++ VI + + L FF
Sbjct: 33 ISGEVISILAKKKPIE---PALEP------LVPFLSKNIITSVIKDEV--NRQLGFRFFI 81
Query: 73 WASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQG 132
WAS++ S S+ ++ LS + L+++K +++DS + +I + +
Sbjct: 82 WASRRER-LRSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKM 140
Query: 133 KNTQKAFSVFNEVK-FNCEDIGPEI--CNSLLAVLASDG-YIDNALKMFDEMSHRGVEFS 188
+KA F +K F+C P++ N +L V+ + + A +++EM +
Sbjct: 141 GMAEKAVESFGRMKEFDCR---PDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPN 197
Query: 189 TIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKV 248
FG+ + + + M D++ R S V ++I G C+ ++A K+
Sbjct: 198 LYTFGILMDGLYKKGRTSDAQKMFDDMTGRGIS--PNRVTYTILISGLCQRGSADDARKL 255
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
E++ PD +A+ + + F +G + E +L+ K G Y I GL
Sbjct: 256 FYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFR 315
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLST 367
RR +A EL ++ D + LI +S A+ + M KG P
Sbjct: 316 ARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYC 375
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ + K LC R +E + +S + F D ++ +++ +C +G +REA + E++
Sbjct: 376 YNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIE 435
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM-------------------------- 461
+ G P V+ +N+L++ C+ L+ A+ L +M
Sbjct: 436 KSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVES 495
Query: 462 ------------FA-SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
FA +G S ++ +YN+LI+ F G+I+GAL+L + + KG++PD+ TY
Sbjct: 496 GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTY 555
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+L+ GL + + AF++F D + ++ + M CR+
Sbjct: 556 NTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRK 598
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/474 (20%), Positives = 185/474 (39%), Gaps = 95/474 (20%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
+R +I + Q+++S N +FN I ++++LA I+ AL+
Sbjct: 7 FRSVIQFYSKPSWMQRSYSSGN-AEFN-------ISGEVISILAKKKPIEPALEPLVPFL 58
Query: 182 HRGVEFSTI--------GFGVFIWKFCENAK-----LGQVLSMLDEVRK----------- 217
+ + S I GF FIW G V+ ML E
Sbjct: 59 SKNIITSVIKDEVNRQLGFRFFIWASRRERLRSRESFGLVIDMLSEDNGCDLYWQTLEEL 118
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV------AEEF 271
+ + S ++I + K E+A + ++ +C+PD Y ++ E F
Sbjct: 119 KSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVF 178
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
++ E++ K +P + + GL + R +A+++
Sbjct: 179 FMLAFAVYNEML-----KCNCSPNLYTFGILMDGLYKKGRTSDAQKM------------- 220
Query: 332 DVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
F+ M +G P T + L LC+R +D+ +++ +
Sbjct: 221 ---------------------FDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEM 259
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+ + D ++N ++ C GR+ EA+ +++ ++ G + Y+SL++ R
Sbjct: 260 QTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRY 319
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A +L+ M ++ Y ILI S+ G+IE AL+L +M KG++PD Y ++
Sbjct: 320 TQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAV 379
Query: 512 LEGLCQETNLQ---------AAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
++ LC L+ + E F + H +++ S+CR L+
Sbjct: 380 IKALCGRGLLEEGRSLQLEMSETESFPDACTHTILIC---------SMCRNGLV 424
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 121/531 (22%), Positives = 197/531 (37%), Gaps = 125/531 (23%)
Query: 138 AFSVFNE-VKFNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
AF+V+NE +K NC P + L+ L G +A KMFD+M+ RG+ + + + +
Sbjct: 182 AFAVYNEMLKCNCS---PNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTI 238
Query: 195 FIWKFCENA--------------------------------KLGQVLSMLDEVRKRENSM 222
I C+ KLG+++ + +R E
Sbjct: 239 LISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEK-- 296
Query: 223 INGSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+G V+ + +I G + +R +AF++ + + KPD I Y I+ + G +
Sbjct: 297 -DGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIE 355
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
+ +L G++P T Y I L + E + L + + D LI
Sbjct: 356 DALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILI 415
Query: 339 GSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR------------------- 378
S+ R A F + + G P+++T + L LCK
Sbjct: 416 CSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPA 475
Query: 379 ----------NKS-DELVEVYKVLSAN---DYFTD------MESYNVMVSFLCTSGRLRE 418
N+S D +VE +L A +F D + SYNV+++ C +G +
Sbjct: 476 SLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDG 535
Query: 419 AYGVIQEMKRKGLDPDVSFYN---------------------------------SLMEAC 445
A ++ ++ KGL PD YN SLM
Sbjct: 536 ALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWS 595
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
CR+ + A LW + + +T N + F E GE E ALR ++E D
Sbjct: 596 CRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKE-GETERALR---RLIELDTRKDE 651
Query: 506 TT---YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
T YT L GLCQ A VF+ +++ + LC+R
Sbjct: 652 LTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKR 702
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 204/460 (44%), Gaps = 21/460 (4%)
Query: 82 HSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
H+P + ++ IL S + + + S+ ++++ I D +I F
Sbjct: 55 HTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
SV ++ N+L+ L G + AL D++ +G + + + +G I
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGV 174
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECK 258
C K+G + + ++K + + +V+ II CK + V EA+ + E+ ++
Sbjct: 175 C---KIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGIS 231
Query: 259 PDFIAYRIVAEEFKLMGSVFE-----REVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
D + Y + F + G + E E+VLK + P Y + L E ++
Sbjct: 232 ADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKT-----INPNVYTYNILVDALCKEGKVK 286
Query: 314 EAKELGEVIVSGKFTIDDDVLNA---LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
EAK + V++ K + DV+ + G + + A FN M G P + T +
Sbjct: 287 EAKSVLAVML--KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 344
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L CK DE + ++K + + + +Y+ ++ LC SGR+ + +I EM +G
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRG 404
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+V Y+SL++ C+ L A L+++M G N T+ IL+ + G ++ A
Sbjct: 405 QPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQ 464
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+F ++L KG + TY +++G C++ L+ A + +K
Sbjct: 465 EVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSK 504
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 150/322 (46%), Gaps = 1/322 (0%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I+ F K K A + L ++ +PD I I+ F MG + VL K K G
Sbjct: 65 ILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG 124
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAI 350
P T I GL ++ ++ +A + +++ F ++ LI V I D R+AI
Sbjct: 125 YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAI 184
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ + P + S + LCK E ++ ++ D+ +Y+ ++
Sbjct: 185 KLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGF 244
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C G+L+EA G++ EM K ++P+V YN L++A C+E ++ AK + M + ++
Sbjct: 245 CIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDV 304
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TY+ L+ + V E++ A +F+ M GV PD TYT L+ G C+ + A +F +
Sbjct: 305 ITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKE 364
Query: 531 SVNHDVMLARSILSTFMISLCR 552
+++ S+ + LC+
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCK 386
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 187/426 (43%), Gaps = 40/426 (9%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++ ++++K L L Q+ ++ L+ Y +I + + +T+ A + +
Sbjct: 130 VTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQK 189
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + ++++ L + A +F EM+ +G+ + + I+ FC K
Sbjct: 190 IDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGK 249
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIREC-KPDFI 262
L + + +L+E+ + IN +V +++ CK +V+EA VL + ++ C KPD I
Sbjct: 250 LKEAIGLLNEMVLK---TINPNVYTYNILVDALCKEGKVKEAKSVL-AVMLKACVKPDVI 305
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + + L+ V + + V +GV P + Y I G C+ K + E
Sbjct: 306 TYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF------CKNKMVDE-- 357
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
A+ F M +K VP + T S+L LCK +
Sbjct: 358 --------------------------ALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIP 391
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
+ ++ + ++ +Y+ ++ LC +G L A + +MK +G+ P+ + L+
Sbjct: 392 YVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILL 451
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+ C+ L+ A++++ + G N+ TYN++I + G +E AL + M + G
Sbjct: 452 DGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCI 511
Query: 503 PDATTY 508
PDA T+
Sbjct: 512 PDAVTF 517
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 124/265 (46%), Gaps = 3/265 (1%)
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
K A + L ++ +PD I+ F MG + +L K K G P T +
Sbjct: 940 KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIE 358
I GL ++ ++ +A + +++ F ++ LI V I D R+AI +
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
+ P + + + LCK + ++ ++ D+ +YN ++ C G+L+E
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKE 1119
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCRE--DLLRPAKKLWDQMFASGCSGNLKTYNIL 476
A G++ +M K ++P+V YN L++A C+E DLL + + +M +GC N T+ I+
Sbjct: 1120 AIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEII 1179
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGV 501
IS E E + +L H M+ +G+
Sbjct: 1180 ISALFEKDENDKVEKLLHEMIARGL 1204
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 94/173 (54%), Gaps = 5/173 (2%)
Query: 351 VFFNF-----MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
+ FNF ++++G P T + L LC + + ++ + + L A + + SY
Sbjct: 977 ITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGT 1036
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+++ +C G R A +++++ + PDV YN++++A C+ L+ A L+ +M G
Sbjct: 1037 LINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKG 1096
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
S ++ TYN LI F VG+++ A+ L + M+ K + P+ TY L++ LC+E
Sbjct: 1097 ISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKE 1149
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D+ + N++++ C G++ + ++ ++ ++G PD + +L+ C + + A
Sbjct: 960 DLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFH 1019
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
D++ A G N +Y LI+ ++G+ A++L + + PD Y ++++ LC+
Sbjct: 1020 DKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKH 1079
Query: 519 TNLQAA----FEVFNKSVNHDVMLARSILSTFMI 548
+ A FE+ K ++ DV+ +++ F I
Sbjct: 1080 QLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCI 1113
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%)
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G +L T NILI+ F +G+I + +L++G PD T+T+L+ GLC + + A
Sbjct: 956 GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015
Query: 525 FEVFNKSVNHDVMLARSILSTFMISLCR 552
+K + L + T + +C+
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCK 1043
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 110/250 (44%), Gaps = 23/250 (9%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFT---------HSP--LSYHSILKSL 94
SLS L + I P L T + L F + NF+ + P +++ +++ L
Sbjct: 947 SLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGL 1006
Query: 95 SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGP 154
L Q+N ++ L+ Y +I + + +T+ A + ++
Sbjct: 1007 CLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDV 1066
Query: 155 EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
+ N+++ L + A +F EM+ +G+ + + I+ FC KL + + +L++
Sbjct: 1067 VMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNK 1126
Query: 215 VRKRENSMINGSVIAV-LIIHGFCK-GKR-VEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
+ + IN +V +++ CK GK ++E+ +L ++ CK + + + I+
Sbjct: 1127 MVLK---TINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEII---- 1179
Query: 272 KLMGSVFERE 281
+ ++FE++
Sbjct: 1180 --ISALFEKD 1187
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 208/476 (43%), Gaps = 7/476 (1%)
Query: 82 HSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
H+P + ++ IL S + + + S+ ++++ I D +I F
Sbjct: 55 HTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
SV ++ N+L+ L G + AL D++ +G + + + + I
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGV 174
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSV-IAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C K+G + +RK + + +V + II CK + V EA+ + E+ ++
Sbjct: 175 C---KIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGIS 231
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
D + Y + F + G + E +L + + P Y + L E ++ EAK +
Sbjct: 232 ADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSV 291
Query: 319 GEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
V++ D + L+ G + + A FN M G P + T + L CK
Sbjct: 292 LAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK 351
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
DE + ++K + + + +Y+ ++ LC SGR+ + +I EM+ +G DV
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVIT 411
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
Y+SL++ C+ L A L+++M N+ T+ IL+ + G ++ A +F ++L
Sbjct: 412 YSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLL 471
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
KG + TY ++ G C++ L+ A + +K ++ + T +I+L ++
Sbjct: 472 TKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKK 527
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 110/511 (21%), Positives = 223/511 (43%), Gaps = 57/511 (11%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFT---------HSP--LSYHSILKSL 94
SLS L + I P L+T + L F + F+ + P ++ ++++K L
Sbjct: 80 SLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGL 139
Query: 95 SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGP 154
L Q+ ++ L+ Y +I + + +T+ A + ++
Sbjct: 140 CLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNV 199
Query: 155 EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
E+ ++++ L + A +F EM+ +G+ + + I+ FC KL + + +L+E
Sbjct: 200 EMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNE 259
Query: 215 VRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIREC-KPDFIAYRIVAEEFK 272
+ + IN +V +++ CK +V+EA VL + ++ C KPD I Y + + +
Sbjct: 260 MVLKT---INPNVYTYNILVDALCKEGKVKEAKSVL-AVMLKACVKPDVITYSTLMDGYF 315
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
L+ V + + V +GV P + Y I G C+ K + E
Sbjct: 316 LVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF------CKNKMVDE------------ 357
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
A+ F M +K VP + T S+L LCK + + ++ +
Sbjct: 358 ----------------ALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMR 401
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D+ +Y+ ++ LC +G L A + +MK + + P++ + L++ C+ L+
Sbjct: 402 DRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLK 461
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A++++ + G N+ TYN++I+ + G +E AL + M + G P+A T+ +++
Sbjct: 462 DAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETII 521
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
L ++ A ++ + M+AR +L
Sbjct: 522 IALFKKDENDKAEKLLRQ------MIARGLL 546
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 102/213 (47%), Gaps = 6/213 (2%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
S+ ++D A+ FN M+ P + + + + K V + L D
Sbjct: 36 SIQNVD--DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPD 93
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ + N++++ C G++ + V+ ++ ++G PD N+L++ C + ++ A D
Sbjct: 94 LITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHD 153
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
++ A G N +Y LI+ ++G+ GA++L + + P+ Y+++++ LC+
Sbjct: 154 KLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQ 213
Query: 520 NLQAAFEVFN----KSVNHDVMLARSILSTFMI 548
+ A+ +F+ K ++ DV+ +++ F I
Sbjct: 214 LVSEAYGLFSEMTVKGISADVVTYSTLIYGFCI 246
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 178/387 (45%), Gaps = 8/387 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L A+ + D M +G + + +GV + C+ +L+++
Sbjct: 190 NTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKME- 248
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + G +I II G CK K +++A + E+ + +P+ + Y + G
Sbjct: 249 -QGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--N 335
+ +L + + P + I + E ++ EA++L + +V K +ID ++ +
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV--KRSIDPSIVTYS 365
Query: 336 ALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+LI D A F FM+ K P + + S L K CK + DE +E+++ +S
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQR 425
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ +Y ++ L +G A + +EM G+ P++ YN+L++ C+ L A
Sbjct: 426 GLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+++ + S + TYNI+I + G++E LF N+ KGV PD Y +++ G
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARS 541
C++ + + A +F K + D L S
Sbjct: 546 FCRKGSKEEADALF-KEMKEDGTLPNS 571
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 196/451 (43%), Gaps = 10/451 (2%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN +++++++ L L + + +++ ++ D Y ++ L + +T
Sbjct: 183 QPN----TVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
AF + N+++ + G I +++ L + ++D+AL +F EM +G+ + + + I
Sbjct: 239 LAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIR 255
C + +L ++ +R+ IN V +I F K ++ EA K+ DE+ R
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERK---INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
P + Y + F + + E + + + P Y I G +R+ E
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEG 415
Query: 316 KELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
EL + + LI G + D A F M+ G P + T + L
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK K ++ + V++ L + + +YN+M+ +C +G++ + + + + KG+ PD
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V YN+++ CR+ A L+ +M G N YN LI G+ E + L
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
M G A DA+T L+ + + L +F
Sbjct: 596 EMRSCGFAGDAST-IGLVTNMLHDGRLDKSF 625
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 180/396 (45%), Gaps = 7/396 (1%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK-- 217
LL+ +A D + + ++M + G+ + + + I FC ++L L++L ++ K
Sbjct: 87 LLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 146
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E +++ S + ++G+C KR+ EA ++D++ + +P+ + + + L
Sbjct: 147 YEPNIVTLSSL----LNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E ++ + G P Y + GL A L + GK + +
Sbjct: 203 SEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTI 262
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G + A+ F M KG P + T S+L LC + + + +
Sbjct: 263 IDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ +++ ++ G+L EA + EM ++ +DP + Y+SL+ C D L AK+
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+++ M + C ++ +Y+ LI F + ++ + LF M ++G+ + TYT+L++GL
Sbjct: 383 MFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLF 442
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
Q + A E+F + V+ V +T + LC+
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%)
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+L +A + EM + P + ++ L+ A + + L +QM G N TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
ILI+ F ++ AL + M++ G P+ T +SLL G C + A + ++
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 206/484 (42%), Gaps = 56/484 (11%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY I+ L R+ + + +++K I D Y +I +KA +FNE
Sbjct: 459 ISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNE 518
Query: 145 VKFNCEDIG--PEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+ D+G P++ S L+ +L G + A K+ + + RG + + C
Sbjct: 519 ML----DVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLC 574
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR----- 255
++ + + +++K M N A L+ G C+ ++ A ++ +
Sbjct: 575 MKHRISKATQLFLKMQKL-GCMPNVVTCATLM-KGLCQSGNIKIALELHKNMLSDTSPYG 632
Query: 256 -ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
CKP+ I+Y I+ + G E + K+ + LGV P Y I G C
Sbjct: 633 INCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGF------CR 686
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
SGK+ + A FN M++ G P ++T S L
Sbjct: 687 ---------SGKW-------------------KDAKYLFNEMVDIGVQPDVTTFSVLIDM 718
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK K E E+ +V+ + +Y +V LC + R+ EA + +M++ G PD
Sbjct: 719 LCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 778
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFA-SGCSG-NLK----TYNILISKFSEVGEIEG 488
V Y +LM+ C+ ++ A +L +M + +G G N K +Y+I+I + G +
Sbjct: 779 VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDE 838
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
A LF M GV P+ +YTSL+ G C+ L+ A +FN+ V+ V L S +
Sbjct: 839 ARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIH 898
Query: 549 SLCR 552
C+
Sbjct: 899 GFCK 902
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 222/493 (45%), Gaps = 32/493 (6%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVN---------KITLDSSVYRFIIPSLIQGKNT 135
++Y +++K L + IN I L Q +N K TL S Y II L + +
Sbjct: 125 ITYGTLMKGLCQTGNIN-IALQLHQEMLNDTGRYGIKCKPTLIS--YSIIIDGLCKDRRE 181
Query: 136 QKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
+A +F E+K + + P++ + SL+ G + A +F+EM G++ G
Sbjct: 182 DEARELFKEMKA--QGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSG 239
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
V I FC+ K+ + +L+ + R I V +I G C R+ EA ++ ++
Sbjct: 240 VLIDMFCKEGKVIEANELLEVMVHR--GCILDIVTYSTLIKGLCMKHRISEATQLFMSMK 297
Query: 254 IRECKPDFIAY----RIVAEEFKLMGSVFEREVVLKKKRKLGVA---PRTNDYREFILGL 306
C+PD IAY + + + K+ ++ + +L + G+ P I L
Sbjct: 298 KLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDIL 357
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTL 365
E ++ EA EL EV++ +D + LI G A F M + G P
Sbjct: 358 CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 417
Query: 366 STLSNLSKNLCKRNKSDELVEVYK-VLSANDYF-----TDMESYNVMVSFLCTSGRLREA 419
T L K LC+ + +++++ +L+ + + SY++++ LC R EA
Sbjct: 418 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 477
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ +EMK +G+ PDV Y +L+ C AK L+++M G ++ T ++LI
Sbjct: 478 RELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDM 537
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ G++ A +L ++++G D T T+L++GLC + + A ++F K M
Sbjct: 538 LCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPN 597
Query: 540 RSILSTFMISLCR 552
+T M LC+
Sbjct: 598 VVTCATLMKGLCQ 610
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 130/560 (23%), Positives = 224/560 (40%), Gaps = 96/560 (17%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY I+ L R+ + + K++K + D Y +I +KA +FNE
Sbjct: 166 ISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNE 225
Query: 145 VKFNCEDIG--PEICNS--LLAVLASDGYIDNALKMFDEMSHRG-----VEFST------ 189
+ D+G P++ S L+ + +G + A ++ + M HRG V +ST
Sbjct: 226 ML----DVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLC 281
Query: 190 ------------------------IGFGVFIWKFCENAKLGQVL---------------- 209
I +G + C+ K+ L
Sbjct: 282 MKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIK 341
Query: 210 ---------SMLDEVRKRENSMIN-----------GSVIAVL----IIHGFCKGKRVEEA 245
SML ++ +E +I G ++ ++ +I G C R+ EA
Sbjct: 342 CIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEA 401
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSV-----FEREVVLKKKR-KLGVAPRTNDY 299
+ ++ C+PD I Y + + G++ +E++ R + P Y
Sbjct: 402 TWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISY 461
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIE 358
I GL +RR EA+EL E + + D LI G S A FN M++
Sbjct: 462 SIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLD 521
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
G P ++T S L LCK+ K E ++ +V+ D+ + +V LC R+ +
Sbjct: 522 VGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISK 581
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM------FASGCSGNLKT 472
A + +M++ G P+V +LM+ C+ ++ A +L M + C N +
Sbjct: 582 ATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAIS 641
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
Y+I+I + G + A LF M GV PD +YTSL+ G C+ + A +FN+ V
Sbjct: 642 YSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV 701
Query: 533 NHDVMLARSILSTFMISLCR 552
+ V + S + LC+
Sbjct: 702 DIGVQPDVTTFSVLIDMLCK 721
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 133/305 (43%), Gaps = 32/305 (10%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I CK +V EA ++L+ + R C D + Y + + + + E + +KL
Sbjct: 59 MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKL 118
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIV--SGKFTIDDDVLNALIGSVSSIDPRS 348
G P Y + GL I A +L + ++ +G++ I
Sbjct: 119 GCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCK---------------- 162
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
PTL + S + LCK + DE E++K + A D+ SY ++
Sbjct: 163 --------------PTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIH 208
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C SG+ +A + EM G+ PDV+ L++ C+E + A +L + M GC
Sbjct: 209 GFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCIL 268
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TY+ LI I A +LF +M + G PDA Y +L++GLCQ + A +
Sbjct: 269 DIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLH 328
Query: 529 NKSVN 533
+ +N
Sbjct: 329 QEMLN 333
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 6/177 (3%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P ++T S L LCK K E E+ +V+ D+ +Y+ ++ LC R+ EA +
Sbjct: 52 PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWL 111
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM------FASGCSGNLKTYNIL 476
M++ G PD Y +LM+ C+ + A +L +M + C L +Y+I+
Sbjct: 112 FMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSII 171
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
I + + A LF M +G+ PD +YTSL+ G C + A +FN+ ++
Sbjct: 172 IDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLD 228
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 6/208 (2%)
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
MI++G + + T S L K LC ++ E ++ + D +Y ++ LC
Sbjct: 76 LLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLC 135
Query: 412 TSGRLREAYGVIQEM----KRKGLD--PDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+G + A + QEM R G+ P + Y+ +++ C++ A++L+ +M A G
Sbjct: 136 QTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQG 195
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
++ +Y LI F G+ E A LF+ ML+ G+ PD TT L++ C+E + A
Sbjct: 196 MMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEAN 255
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCRR 553
E+ V+ +L ST + LC +
Sbjct: 256 ELLEVMVHRGCILDIVTYSTLIKGLCMK 283
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN---------SLMEACCR 447
F D ++N++++ LC R+ E + + R+G PD+ Y+ L++ C+
Sbjct: 7 FPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCK 66
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
E + A +L + M GC ++ TY+ LI I A LF +M + G PDA T
Sbjct: 67 EGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAIT 126
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVN 533
Y +L++GLCQ N+ A ++ + +N
Sbjct: 127 YGTLMKGLCQTGNINIALQLHQEMLN 152
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 210/504 (41%), Gaps = 28/504 (5%)
Query: 61 LTHHSLALGFFNWASQQPNF------------TH--------SPLSYHSILKSLSLSRQI 100
L H LAL F W +QP TH P + ILK LSL
Sbjct: 47 LVHGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARH--ILKELSLMSGK 104
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSL 160
++ + SVY +I ++ Q + +F + + CN++
Sbjct: 105 SSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAI 164
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
L + G + EM R + F + I C + ++ +K E
Sbjct: 165 LGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLM---QKMEK 221
Query: 221 SMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
S +++ ++H +CK R + A ++LD ++ + D Y ++ + + +
Sbjct: 222 SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 281
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
++L+ RK + P Y I G E ++ A +L ++S + + NALI
Sbjct: 282 GYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID 341
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G +S + + A+ F M KG P+ + L LCK + D Y + N
Sbjct: 342 GHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV 401
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+Y M+ LC +G L EA ++ EM + G+DPD+ Y++L+ C+ + AK++
Sbjct: 402 GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 461
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+++ G S N Y+ LI +G ++ A+R++ M+ +G D T+ L+ LC+
Sbjct: 462 CRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKA 521
Query: 519 TNLQAAFEVFNKSVNHDVMLARSI 542
+ A E F + + D +L ++
Sbjct: 522 GKVAEA-EEFMRCMTSDGILPNTV 544
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/478 (22%), Positives = 200/478 (41%), Gaps = 71/478 (14%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ + + ++Y+++L + A +L +K + D Y +I L +
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 279
Query: 136 QKAFSVF----------NEVKFNCED----------IGPEICNSLLAVLAS--------- 166
K + + NEV +N I ++ N +L+ S
Sbjct: 280 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 339
Query: 167 -DGYIDN-----ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
DG+I ALKMF M +G+ S + +GV + C+NA+ L+ +R + N
Sbjct: 340 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFD--LARGFYMRMKRN 397
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
+ G + +I G CK ++EA +L+E+ PD + Y + F +G
Sbjct: 398 GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA 457
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+ ++ + ++G++P G+I I +G +
Sbjct: 458 KEIVCRIYRVGLSPN---------GIIYSTLIYNCCRMGCL------------------- 489
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ AI + MI +G T + L +LCK K E E + ++++ +
Sbjct: 490 ------KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
S++ +++ SG +A+ V EM + G P Y SL++ C+ LR A+K
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ A + + YN L++ + G + A+ LF M+++ + PD+ TYTSL+ GLC++
Sbjct: 604 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 661
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 102/544 (18%), Positives = 221/544 (40%), Gaps = 46/544 (8%)
Query: 54 RVINPYLLTHHSLALGFFN-----WASQQPN----FTHSP--LSYHSILKSLSLSRQINA 102
R+I+P +T+++L GF N ASQ N F SP +++++++
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLA 162
+ ++ +T Y ++ L + A + +K N +G ++
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG---QVLSMLDEVRKRE 219
L +G++D A+ + +EMS G++ + + I FC+ + +++ + V
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471
Query: 220 NSMINGSVI----------------AVLIIHG--------------FCKGKRVEEAFKVL 249
N +I ++I +I+ G CK +V EA + +
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
+ P+ +++ + + G + V + K+G P Y + GL
Sbjct: 532 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTL 368
+ EA++ + + + +D + N L+ ++ S + A+ F M+++ +P T
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSA-NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
++L LC++ K+ + K A + + Y V + +G+ + ++M
Sbjct: 652 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 711
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
G PD+ N++++ R + L +M NL TYNIL+ +S+ ++
Sbjct: 712 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 771
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
+ L+ +++ G+ PD T SL+ G+C+ L+ ++ + V + R + +
Sbjct: 772 TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 831
Query: 548 ISLC 551
C
Sbjct: 832 SKCC 835
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 112/523 (21%), Positives = 207/523 (39%), Gaps = 62/523 (11%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F S + ++IL S+ S + ++ S LK++ KI D + + +I L + +K+
Sbjct: 153 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 212
Query: 139 FSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+ K P I N++L G A+++ D M +GV+ + + I
Sbjct: 213 SYLMQ--KMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLI 270
Query: 197 WKFCENAKLGQVLSMLDEVRKR--------ENSMING----------------------- 225
C + ++ + +L ++RKR N++ING
Sbjct: 271 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 330
Query: 226 --SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE------EFKLMGSV 277
V +I G +EA K+ + + P ++Y ++ + EF L
Sbjct: 331 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL---- 386
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV----SGKFTIDDDV 333
R ++ KR GV Y I GL C+ L E +V K ID D+
Sbjct: 387 -ARGFYMRMKRN-GVCVGRITYTGMIDGL------CKNGFLDEAVVLLNEMSKDGIDPDI 438
Query: 334 L--NALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
+ +ALI + ++A + G P S L N C+ E + +Y+
Sbjct: 439 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 498
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ + D ++NV+V+ LC +G++ EA ++ M G+ P+ ++ L+
Sbjct: 499 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 558
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
A ++D+M G TY L+ + G + A + ++ A D Y +
Sbjct: 559 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 618
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
LL +C+ NL A +F + V ++ ++ + LCR+
Sbjct: 619 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 661
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 118/556 (21%), Positives = 222/556 (39%), Gaps = 70/556 (12%)
Query: 45 DSLSPSLVAR--VINPYLLTHHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQI 100
D + P+ V+ +IN Y + L F+ + H P +Y S+LK L +
Sbjct: 537 DGILPNTVSFDCLINGY--GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICN 158
+ LK + +D+ +Y ++ ++ + N KA S+F E+ I P+
Sbjct: 595 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQ--RSILPDSYTYT 652
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRG------VEFSTIGFGVFIWKFCENAKLGQVLSML 212
SL++ L G A+ E RG V ++ G+F K GQ + +
Sbjct: 653 SLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMF--------KAGQWKAGI 704
Query: 213 DEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
+ +N ++ +I G+ + ++E+ +L E+ + P+ Y I+ +
Sbjct: 705 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 764
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL-----------IVERRICEAKEL-- 318
V ++ + G+ P +LG+ I++ IC E+
Sbjct: 765 SKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDR 824
Query: 319 -------------GE---------VIVSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFN 354
GE V+ S ++D D +A++ SV + + R + + +
Sbjct: 825 YTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMV-SVLNRNHRFQESRMVLH 883
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M ++G P L LC+ V + + A+ + + MV L G
Sbjct: 884 EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG 943
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ EA +++ M + L P ++ + +LM CC+ + A +L M G +L +YN
Sbjct: 944 KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1003
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG-LCQETNLQAAFEVFNKSVN 533
+LI+ G++ A L+ M G +ATTY +L+ G L +ET A +
Sbjct: 1004 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKD--- 1060
Query: 534 HDVMLARSILSTFMIS 549
+LAR +++ +S
Sbjct: 1061 ---LLARGFITSMSLS 1073
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/458 (19%), Positives = 181/458 (39%), Gaps = 39/458 (8%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
T +++ ++ SL + ++ + ++ + + I ++ + +I KAFS
Sbjct: 505 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 564
Query: 141 VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
VF+E+ SLL L G++ A K + T+ + + C
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 624
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFC-KGKRVEEAFKVLDELRIRECKP 259
++ L + +S+ E+ +R S++ S +I G C KGK V
Sbjct: 625 KSGNLAKAVSLFGEMVQR--SILPDSYTYTSLISGLCRKGKTV----------------- 665
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
IA + A+E + G+V +V+ Y F+ G+ +
Sbjct: 666 --IAI-LFAKEAEARGNVLPNKVM---------------YTCFVDGMFKAGQWKAGIYFR 707
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
E + + T D NA+I S + M + P L+T + L KR
Sbjct: 708 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 767
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+Y+ + N D + + +V +C S L +++ +G++ D +
Sbjct: 768 KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 827
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
N L+ CC + A L M + G S + T + ++S + + + + H M +
Sbjct: 828 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 887
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+G++P++ Y L+ GLC+ +++ AF V + + H +
Sbjct: 888 QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 925
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/537 (20%), Positives = 219/537 (40%), Gaps = 78/537 (14%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
S LGFF+ + F H+ +Y +++ L +++ + +L+Q+K++ I ++
Sbjct: 55 SSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFIC 114
Query: 125 IIPSLIQGKNTQKAFSVFNEV-KFNCED--------------------IGPEICNS---- 159
II + + ++A +F + +F C+ I P N
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDG 174
Query: 160 ----------LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
LL L + +D A K+F EMS++G + + + C+ K+
Sbjct: 175 LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKI---- 230
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
D+ R+ + +I G CK R+E A K+L E+ P+ ++Y +
Sbjct: 231 ---DDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
+ G+V + + G + + I G + ++ EA +L ++++
Sbjct: 288 SLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEP 347
Query: 330 DDDVLNALI------------------------------------GSVSSIDPRSAIVFF 353
+ N LI G S D A +
Sbjct: 348 NVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETW 407
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
N MI G P + T + + LCK + D+ + + ++ + ++N + LC +
Sbjct: 408 NRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGN 467
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
GR+ A +++ M+ G P+++ YN L++A R + A L+ ++ A NL TY
Sbjct: 468 GRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTY 527
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
N ++ FS G + AL+LF L +G APD+ TY +++ C++ ++ A ++ +
Sbjct: 528 NTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVER 584
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/458 (21%), Positives = 183/458 (39%), Gaps = 72/458 (15%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
F S Y++++ + +I +L ++ N + + Y II SL N + AF
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
++F ++ D L+ G + AL ++ M G E + + + I
Sbjct: 300 ALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGL 359
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
C N L + L + D++ +R + N + ++LI GF K + A + + + C+P
Sbjct: 360 CSNGSLEEALQVCDQM-QRSGCLPNVTTYSILI-DGFAKSGDLVGASETWNRMISHGCRP 417
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKL-GVAPRTNDYREFILGLIVERRICEAKEL 318
+ + Y + + S+F++ L +K L G P T + FI GL R+ A +L
Sbjct: 418 NVVTYTCMVDVL-CKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKL 476
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
E M G +P ++T + L L +
Sbjct: 477 LER----------------------------------MQGHGCLPNITTYNELLDALFRM 502
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
NK +E +++ + A + ++ +YN ++ +G + EA + + +G PD Y
Sbjct: 503 NKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITY 562
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
N+++ A C++ G +K L+ + S + E +H
Sbjct: 563 NTMIHAYCKQ-------------------GKVKIAAQLVERVSSMKE-------WH---- 592
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
PD TYTSL+ G C N++ A +K++N +
Sbjct: 593 ----PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGI 626
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 77/175 (44%)
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
RN S L + ++N + +Y VM+ L + ++Q+MK G++
Sbjct: 52 RNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDL 111
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
+ ++ R A K++ ++ GC ++ YN L+ + + L+ NM
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ G+ P+ TY LL+ LC+ + AA ++F + N +T + SLC+
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCK 226
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/215 (18%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
T + +++++ +K L + ++ +L++++ + + + Y ++ +L + ++AF
Sbjct: 451 TPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFG 510
Query: 141 VFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+F E++ ++ P + N++L + G + AL++F + RG +I + I
Sbjct: 511 LFQEIE--ARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHA 568
Query: 199 FCENAKL---GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
+C+ K+ Q++ + +++ +I + +I G C +EEA LD+ +
Sbjct: 569 YCKQGKVKIAAQLVERVSSMKEWHPDIITYTS----LIWGACNWMNIEEAMAFLDKAINQ 624
Query: 256 ECKPDFIAY----RIVAEEFKLMGSVFEREVVLKK 286
P+F + R + MG + + +L+K
Sbjct: 625 GICPNFATWNALVRCFFDSLGHMGPIHILDDILRK 659
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 183/433 (42%), Gaps = 80/433 (18%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL+ +A D + + ++M + G+ + + +FI FC ++L L++L ++ K
Sbjct: 81 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMK-- 138
Query: 220 NSMINGSVIAVL--IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ G I L +++GFC G R+ EA ++D++
Sbjct: 139 --LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV------------------------ 172
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
++G P T + + GL + EA L E +V D A+
Sbjct: 173 -----------EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 221
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN-LSKNLCKRNKSDELVEVYKVLSAND 395
I G +P A+ N M EKG++ + N + LCK D+ +++ +
Sbjct: 222 INGLCKRGEPDLALNLLNKM-EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D+ +YN ++S LC GR +A ++ +M K ++PD+ F+N+L++A +E L A+
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 456 KLWDQMFAS------------------------------------GCSGNLKTYNILISK 479
KL+D+M S G GN TY LI
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
F + + + A +F M+ GV PD TY LL+GLC N++ A VF D+ L
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460
Query: 540 RSILSTFMISLCR 552
+T + +LC+
Sbjct: 461 IVTYTTMIEALCK 473
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 160/357 (44%), Gaps = 4/357 (1%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A+ + + M +G + + +G I C+ + L++L+++ K + VI I
Sbjct: 199 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK--GKIEADVVIYNTI 256
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I G CK K +++AF + +++ + KPD Y + G + +L + +
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV-LNALI-GSVSSIDPRSAI 350
P + I + E ++ EA++L + +V K D V N LI G +
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGM 376
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
F M ++G V T + L + D V+K + ++ D+ +YN+++ L
Sbjct: 377 EVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGL 436
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C +G + A V + M+++ + D+ Y +++EA C+ + L+ + G N+
Sbjct: 437 CNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNV 496
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
TY ++S F G E A LF M E G P++ TY +L+ ++ + A+ E+
Sbjct: 497 VTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAEL 553
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/499 (20%), Positives = 204/499 (40%), Gaps = 51/499 (10%)
Query: 40 QLGLRDSLSPSLVARVINPYLLTHHSLALGFFN---------WASQQPNFTHSP--LSYH 88
QL L ++ ++ P ++T +SL GF + Q + P +++
Sbjct: 125 QLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 184
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
+++ L + + ++++++ V D Y +I L + A ++ N+++
Sbjct: 185 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG 244
Query: 149 CEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV 208
+ I N+++ L ++D+A +F++M +G++ + I C +
Sbjct: 245 KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA 304
Query: 209 LSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDEL-RIRECKPDFIAYRI 266
+L ++ ++ IN ++ +I F K ++ EA K+ DE+ + + C PD +AY
Sbjct: 305 SRLLSDMLEKN---INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ + F V E V ++ + G+ T Y I G R
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQAR---------------- 405
Query: 327 FTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
D +A + F M+ G P + T + L LC + +
Sbjct: 406 ------------------DCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALV 447
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
V++ + D D+ +Y M+ LC +G++ + + + + KG+ P+V Y ++M C
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
R+ L A L+ +M G N TYN LI G+ + L M G A DA+
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAS 567
Query: 507 TYTSLLEGLCQETNLQAAF 525
T+ L+ + + L +F
Sbjct: 568 TF-GLVTNMLHDGRLDKSF 585
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F M++ P++ S L + K NK D ++ + + + ++ +Y++ ++
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
+ C +L A ++ +M + G P + NSL+ C + + A L DQM G
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ T+ L+ + + A+ L M+ KG PD TY +++ GLC+ A +
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
NK + I +T + LC+
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCK 262
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 79/184 (42%)
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
NLS+ + + K D+ + ++ + + F + ++ ++S + + + ++M+
Sbjct: 45 NLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 104
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
G+ ++ Y+ + CR L A + +M G ++ T N L++ F I A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
+ L M+E G PD T+T+L+ GL Q A + + V +
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224
Query: 550 LCRR 553
LC+R
Sbjct: 225 LCKR 228
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 181/414 (43%), Gaps = 38/414 (9%)
Query: 155 EICNSLLAVLASDGYIDNALKMFDEMSH-RGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
+ CN+LL LA G + K+FDEM + V + + I C+ K+ +L
Sbjct: 194 KTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILS 253
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
++ G+V L++ CK RV+EA ++ + P + + I+ K
Sbjct: 254 DLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKR 313
Query: 274 MGSVFEREVVLKKKRKLGVAP-------------RTNDYREFILGL-------------- 306
E +L++ LG+ P R + E I
Sbjct: 314 SDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVT 373
Query: 307 --IVERRICEAKELG------EVIVSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFNFM 356
++ R +C+ E+ E ++S TI + N+++ + R S + + M
Sbjct: 374 YNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEM 433
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
+++G P + ++ +K LC+ + E V ++ + ++ + N ++ LC +
Sbjct: 434 VKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNM 493
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
+ A V++ M KG++ D YN +++ CC++ + A KL D M G + +N +
Sbjct: 494 KGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSI 553
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
I + ++G++E AL L M +GV PD +Y ++++G C+ ++Q A E N+
Sbjct: 554 IHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNE 607
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/475 (20%), Positives = 205/475 (43%), Gaps = 9/475 (1%)
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNK-ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
+++L++L+ + + A V +++ K +T + Y +I +L + F + +++
Sbjct: 197 NALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLI 256
Query: 147 FNC--EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ G N L+ L G +D A+++ M V S + FG+ I + +
Sbjct: 257 HAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDR 316
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
G+V ++L E+ + VI +I C+ EA ++ DE+ +E K + Y
Sbjct: 317 FGEVGALLREMEGL--GITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTY 374
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA--KELGEVI 322
++A G + E +L++ G+ + + + GL+ E+ + + E++
Sbjct: 375 NLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMV 434
Query: 323 VSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
G +D ++ A + + A+ + M+EKG ++T + L LC+
Sbjct: 435 KRG-MKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNM 493
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
EV + + D +YN+M+ C ++ EA + +M RKG PD +NS+
Sbjct: 494 KGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSI 553
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ A C + A L QM G ++ +Y +I + + +I+ A + ++ G+
Sbjct: 554 IHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGL 613
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
P+A Y +L+ G + N+ A V + + + + M +C L+
Sbjct: 614 KPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLV 668
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 190/439 (43%), Gaps = 21/439 (4%)
Query: 70 FFNWASQQPNFTH---------------SPLSYHSILKSLSLSRQINAIDSVLKQVKVNK 114
+W ++ +FT + ++Y+ I ++L ++ + +L+++
Sbjct: 342 LIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTG 401
Query: 115 ITLDSSVYRFIIPSLIQGKNT-QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNA 173
+T+ S ++ ++ L+Q + + +E+ + + L A
Sbjct: 402 MTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEA 461
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLII 233
+ ++ +M +G+ + I CE + +L + + + N + ++I
Sbjct: 462 VGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDN--ITYNIMI 519
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
G CK ++EEA K+ D++ + KPD + + + +G + E +L + + GV
Sbjct: 520 QGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQ 579
Query: 294 PRTNDYREFILGLIVERRICEAKE-LGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIV 351
P Y I G + I +A E L E++ G + + NALIG + + AI
Sbjct: 580 PDVVSYGTIIDGYCKAKDIQKANEYLNELMACG-LKPNAVIYNALIGGYGRNGNISGAIG 638
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
+ M G PT T +L +C DE +++ N + Y +M+ LC
Sbjct: 639 VLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLC 698
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
G++ EA +EM+ + + P+ Y +LM A C+ A KL+D+M +SG +
Sbjct: 699 KIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNV 758
Query: 472 TYNILISKFSEVGEIEGAL 490
+YN L++ FS+V ++ A+
Sbjct: 759 SYNTLVTGFSQVDSLDKAI 777
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/422 (20%), Positives = 179/422 (42%), Gaps = 45/422 (10%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
ICN L+ G+ A+++FDEM + ++ + + + + C+ ++ + +L+E+
Sbjct: 338 ICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEM 397
Query: 216 RKRENSMING---SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
++ +G SV+A L+ + R+E +++ E+ R KP+ ++
Sbjct: 398 LSTGMTIHSGLFNSVVAGLLQ----RTGRLESVVRLISEMVKRGMKPNDALMTACTKQL- 452
Query: 273 LMGSVFEREV-VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
G + V + K + G+ I GL + + A E+ +V+ +D+
Sbjct: 453 CQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDN 512
Query: 332 DVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE------- 383
N +I G A+ + MI KG P +++ C K +E
Sbjct: 513 ITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQ 572
Query: 384 ---------------LVEVY----KVLSANDYFTDMES---------YNVMVSFLCTSGR 415
+++ Y + AN+Y ++ + YN ++ +G
Sbjct: 573 MKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGN 632
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ A GV+ M+ G+ P Y SLM C L+ AK +++Q + + Y I
Sbjct: 633 ISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTI 692
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
+I ++G+++ A+ F M + + P+ TYT+L+ C+ N + A ++F++ V+
Sbjct: 693 MIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSG 752
Query: 536 VM 537
++
Sbjct: 753 IV 754
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR-KGLDPDVSFYNSLME 443
V+ + VLS+ +++ N ++ L +G L V EM+ K + P+ Y S+++
Sbjct: 178 VDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIK 237
Query: 444 ACCREDLLRPAKKLWDQMFASGC--SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
A C+ + K+ + +G S YN+L+ + G ++ A+RL M E V
Sbjct: 238 ALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRV 297
Query: 502 APDATTYTSLLEGL 515
AP T+ L+ GL
Sbjct: 298 APSMVTFGILINGL 311
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF-ASGCSGNLKT 472
G LR A + + P V N+L+EA R L K++D+M + N +
Sbjct: 172 GSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYS 231
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGV--APDATTYTSLLEGLCQETNLQAAFEV 527
Y +I +VG+++ ++ +++ G+ + A Y L++ LC+ + A +
Sbjct: 232 YTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRL 288
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 206/484 (42%), Gaps = 56/484 (11%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY I+ L R+ + + K++K I D Y +I +KA +FNE
Sbjct: 303 ISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNE 362
Query: 145 VKFNCEDIG--PEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+ D+G P++ S L+ +L G + A K+ + + RG + + C
Sbjct: 363 ML----DVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLC 418
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR----- 255
++ + + +++K M N A L+ G C+ ++ A ++ +
Sbjct: 419 MKHRISKATQLFLKMQKL-GCMPNVVTCATLM-KGLCQSGNIKIALELHKNMLSDTSPYG 476
Query: 256 -ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
CKP+ I+Y I+ + G E + K+ + LGV P Y I G C
Sbjct: 477 INCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGF------CR 530
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
SGK+ + A FN M++ G P ++T S L
Sbjct: 531 ---------SGKW-------------------KDAKYLFNEMVDIGVQPDVTTFSVLIDM 562
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK K E E+ +V+ + +Y +V LC + R+ EA + +M++ G PD
Sbjct: 563 LCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 622
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFA-SGCSG-NLK----TYNILISKFSEVGEIEG 488
V Y +LM+ C+ ++ A +L +M + +G G N K +Y+I+I + G +
Sbjct: 623 VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDE 682
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
A LF M GV P+ +YTSL+ G C+ L+ A +FN+ V+ V L S +
Sbjct: 683 ARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIH 742
Query: 549 SLCR 552
C+
Sbjct: 743 GFCK 746
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 127/492 (25%), Positives = 219/492 (44%), Gaps = 31/492 (6%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVN---------KITLDSSVYRFIIPSLIQGKNT 135
++Y +++K L + +IN I L Q +N K TL S Y II L + +
Sbjct: 81 IAYGTLMKGLCQTGKIN-IALHLHQEMLNDTSQYGIKCKPTLVS--YSIIIDGLCKDRRE 137
Query: 136 QKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
+A +F E+K + + P++ + SL+ G + A +F+EM G+
Sbjct: 138 DEARELFKEMKA--QGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSS 195
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
+ I C+ K+ + +L+ + +R I V +I G C R+ EA ++ ++
Sbjct: 196 MLIDILCKEGKVIEANELLEVMIQR--GCILDIVTYSTLIKGLCMKHRISEATRLFMSMQ 253
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFE----REVVLKKKRKLGVA--PRTNDYREFILGLI 307
C+PD IAY + + G++ + +L + G+ P Y I GL
Sbjct: 254 KLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLC 313
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
+RR EA+EL + + + D LI G S A FN M++ G P ++
Sbjct: 314 KDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVT 373
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T S L LCK+ K E ++ +V+ D+ + +V LC R+ +A + +M
Sbjct: 374 TSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKM 433
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM------FASGCSGNLKTYNILISKF 480
++ G P+V +LM+ C+ ++ A +L M + C N +Y+I+I
Sbjct: 434 QKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGL 493
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
+ G + A LF M GV PD +YTSL+ G C+ + A +FN+ V+ V
Sbjct: 494 CKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDV 553
Query: 541 SILSTFMISLCR 552
+ S + LC+
Sbjct: 554 TTFSVLIDMLCK 565
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 172/387 (44%), Gaps = 15/387 (3%)
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M H G++ GV I FC+ K+ + +L+ + +R I V +I G C
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQR--GCILDIVTYSTLIKGLCMK 58
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV----FEREVVLKKKRKLGVA-- 293
R+ EA ++ ++ C+PD IAY + + G + + +L + G+
Sbjct: 59 HRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCK 118
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVF 352
P Y I GL +RR EA+EL + + + D +LI G S A
Sbjct: 119 PTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCL 178
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
FN M++ G ++T S L LCK K E E+ +V+ D+ +Y+ ++ LC
Sbjct: 179 FNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 238
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM------FASGC 466
R+ EA + M++ G PD Y +LM+ C+ + A +L +M + C
Sbjct: 239 KHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKC 298
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
L +Y+I+I + + A LF M +G+ PD +YT+L+ G C + A
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 358
Query: 527 VFNKSVNHDVMLARSILSTFMISLCRR 553
+FN+ ++ + + S + LC++
Sbjct: 359 LFNEMLDVGIQPDVTTSSVLIDMLCKK 385
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 179/406 (44%), Gaps = 11/406 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL----SMLD 213
++L+ L I A ++F M G I +G + C+ K+ L ML+
Sbjct: 49 STLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLN 108
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
+ + V +II G CK +R +EA ++ E++ + PD I+Y + F
Sbjct: 109 DTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCR 168
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
G + + + + +G+ I L E ++ EA EL EV++ +D
Sbjct: 169 SGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVT 228
Query: 334 LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK-VL 391
+ LI G A F M + G P L K LC+ + +++++ +L
Sbjct: 229 YSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEML 288
Query: 392 SANDYF-----TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
+ + + SY++++ LC R EA + +EMK +G+ PDV Y +L+ C
Sbjct: 289 NDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFC 348
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
AK L+++M G ++ T ++LI + G++ A +L ++++G PD
Sbjct: 349 LSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVV 408
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
T T+L++GLC + + A ++F K M +T M LC+
Sbjct: 409 TCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQ 454
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 191/454 (42%), Gaps = 46/454 (10%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++K L + +I+ + +K D+ Y ++ L Q A + E
Sbjct: 46 VTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQE 105
Query: 145 VKFNCEDIGPEICNSLLAV------LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ + G + +L++ L D D A ++F EM +G+ I + I
Sbjct: 106 MLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHG 165
Query: 199 FCENAKLGQVLSMLDE---VRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
FC + K + + +E V R + + +I +L CK +V EA ++L+ + R
Sbjct: 166 FCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDIL-----CKEGKVIEANELLEVMIQR 220
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
C D + Y + + + + E + +KLG P Y + GL I A
Sbjct: 221 GCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTA 280
Query: 316 KELGEVIV--SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+L + ++ +G++ I PTL + S +
Sbjct: 281 LQLHQEMLNDTGRYGIKCK------------------------------PTLISYSIIID 310
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
LCK + DE E++K + A D+ SY ++ C SG+ +A + EM G+ P
Sbjct: 311 GLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQP 370
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
DV+ + L++ C++ + A KL + + GC ++ T L+ I A +LF
Sbjct: 371 DVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLF 430
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
M + G P+ T +L++GLCQ N++ A E+
Sbjct: 431 LKMQKLGCMPNVVTCATLMKGLCQSGNIKIALEL 464
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 197/444 (44%), Gaps = 12/444 (2%)
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
L R +A+ ++L+ + + D+ +Y+ +I +L+ +A + +E+
Sbjct: 190 LGRAGDAL-ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVN 248
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
N L+ L G + A ++ D M +G S + +G + C + + +ML +
Sbjct: 249 TFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRL 308
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ M+N +I G ++ A ++ + + + C PD Y I+ +G
Sbjct: 309 PEVNVVMLN------TVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLG 362
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+L + + G AP Y + +A+ + + +++ F+++ N
Sbjct: 363 RFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYN 422
Query: 336 ALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
+I ++ +D + +V M +G P + T + + +LC + +E +++ L
Sbjct: 423 GIIYALCKDGKLDQATRLV--QEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLI 480
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ +YN ++ L +GR +E + EM G DV YN L++A C+E +
Sbjct: 481 EEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVD 540
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
+ L ++M G N +YN+LI++ + G++ AL L ML +G+ PD TY +L+
Sbjct: 541 RSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI 600
Query: 513 EGLCQETNLQAAFEVFNKSVNHDV 536
GLC+ AA + K N +V
Sbjct: 601 NGLCKVGWTHAALNLLEKLPNENV 624
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 174/415 (41%), Gaps = 42/415 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N +L+ LA +AL ++ M V +T FGV C + G L++L + +
Sbjct: 146 NVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGMAR 205
Query: 218 R---ENSMINGSVIAVLI------------------------------IHGFCKGKRVEE 244
++++ +VI L+ + G C RV E
Sbjct: 206 HGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVRE 265
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN--DYREF 302
A +++D + + C P + Y F L G R+ + LG P N
Sbjct: 266 AARLVDRMMTQGCMPSVVTY-----GFLLQGLCRTRQAD-EACAMLGRLPEVNVVMLNTV 319
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGR 361
I G + E ++ A EL E++ S D + L+ + + SA+ + M EKG
Sbjct: 320 IRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGC 379
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P + T S L + C+ D+ + + A + + + YN ++ LC G+L +A
Sbjct: 380 APNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATR 439
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
++QEMK +G PD+ YN+++ C DL+ A+ ++ + G N TYN LI
Sbjct: 440 LVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALL 499
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
G + LRL ML G D +Y L++ LC+E N+ + + + V +
Sbjct: 500 RNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGI 554
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 197/454 (43%), Gaps = 65/454 (14%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQV-KVNKITLDSSVYRFIIPSLIQGKNTQKAFSV 141
S ++Y +L+ L +RQ + ++L ++ +VN + L++ +I+G T+ +
Sbjct: 281 SVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNT---------VIRGCLTEGKLAR 331
Query: 142 FNEVKFNCEDIGPEICNS-------LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
E+ E +G + C L+ L G +A++M DEM +G + + +
Sbjct: 332 ATELY---EMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYST 388
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSM----INGSVIAVLIIHGFCKGKRVEEAFKVLD 250
+ FC N +MLD++ + SM NG II+ CK ++++A +++
Sbjct: 389 LLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNG------IIYALCKDGKLDQATRLVQ 442
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
E++ + CKPD Y + + E E + + + GV Y I L+
Sbjct: 443 EMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNG 502
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
R E L ++ +D ++ +N +I
Sbjct: 503 RWQEGLRLASEMLLHGCQLD-------------------VISYNGLI------------- 530
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
K LCK D + + + + + SYN++++ LC +G++R+A + +EM +G
Sbjct: 531 --KALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG 588
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L PD+ YN+L+ C+ A L +++ ++ TYNILIS +V ++ A
Sbjct: 589 LTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAA 648
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQET-NLQA 523
L + G+ P+ T+ +++ ++T NL+
Sbjct: 649 MLLDKAISGGIVPNERTWGMMVQNFVRQTVNLEG 682
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
++ V LC GR +A +++ M R G PD Y +++ A + + A L D+M
Sbjct: 179 TFGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEM 238
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
GC+ ++ T+N L+ +G + A RL M+ +G P TY LL+GLC+
Sbjct: 239 LLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQA 298
Query: 522 QAAFEVFNKSVNHDVMLARSIL 543
A + + +V++ +++
Sbjct: 299 DEACAMLGRLPEVNVVMLNTVI 320
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 59/151 (39%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
SYNV++S L + +A + + M R + P + A CR A L M
Sbjct: 144 SYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGM 203
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
GC + Y +I G + A L ML G A D T+ L+ GLC +
Sbjct: 204 ARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRV 263
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ A + ++ + M + + LCR
Sbjct: 264 REAARLVDRMMTQGCMPSVVTYGFLLQGLCR 294
>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Brachypodium distachyon]
Length = 726
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/457 (21%), Positives = 205/457 (44%), Gaps = 13/457 (2%)
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE---ICNSL 160
D++L + K+ ++ + F++ L++ A S+F+++K + GP S+
Sbjct: 159 DALLTYTEAKKVGVELQLCNFLLKCLVERNQIIYARSLFDDMKSS----GPSPNVYSYSV 214
Query: 161 LAVLASDG---YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
L + G Y+ A ++ EM +GV+ + +G +++ ++ + L + +
Sbjct: 215 LMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQ 274
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R N AV I GFC+ +V+EA +V D ++ PD +Y I+ + G V
Sbjct: 275 RGNPCNTYCFNAV--IQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDV 332
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+L + + G+AP Y + GL ++ A EL + F D V + +
Sbjct: 333 LTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSII 392
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ G ++ +N M+ VP ++L C+ + + V++++ +
Sbjct: 393 LNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGV 452
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ + ++V + EA+ + ++++ G+ P++ Y ++ C+ +
Sbjct: 453 SPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWG 512
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
++ M G + Y+I+I F + ++ A RLFH ML++G P+ TYTSL+ GLC
Sbjct: 513 IFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLC 572
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ L +F + + R + ++ ++ C+R
Sbjct: 573 HDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKR 609
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 186/430 (43%), Gaps = 30/430 (6%)
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGP--EIC-NSLLAV 163
+K VK N T + +Y T++ S +N ++ C+ P C N+++
Sbjct: 239 MKGVKPNAATYGTYLYGL--------SRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQG 290
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
+G + A+++FD M G+ T + + + C K G VL+ D + + + I
Sbjct: 291 FCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLC---KQGDVLTGYDLLVEMARNGI 347
Query: 224 NGSVIAVL-IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV--FER 280
++++ ++HG C+ +VE AF++ L + K D I Y I+ L G
Sbjct: 348 APTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSII-----LNGCCQHLNI 402
Query: 281 EVVLKKKRKL---GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
EVV + P +Y I R + +A + E+++ + + L
Sbjct: 403 EVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTIL 462
Query: 338 I---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+ G ID A +F + + + G VP L + LCK NKSD + ++ +
Sbjct: 463 VDGFGKERMID--EAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKR 520
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
Y D Y++++ + +L EA+ + +M +G P+V Y SL+ C +D L
Sbjct: 521 GYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEV 580
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
L+ M G + + Y LI + + ++ AL +F M + G++ DA YT L+ G
Sbjct: 581 VTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGG 640
Query: 515 LCQETNLQAA 524
+ + A
Sbjct: 641 FSKVLAMDGA 650
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/442 (19%), Positives = 193/442 (43%), Gaps = 8/442 (1%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A F Q+ N ++ ++++++ Q+ V +K + D+ Y ++
Sbjct: 265 AWNFLQMLCQRGNPCNT-YCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILV 323
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRG 184
L + + + + E+ N I P + + SLL L G ++ A ++F + +G
Sbjct: 324 DGLCKQGDVLTGYDLLVEMARN--GIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQG 381
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
+ I + + + C++ + V + +++ ++ + + +I+ FC+ + + +
Sbjct: 382 FKHDHIVYSIILNGCCQHLNIEVVCDLWNDMV--HHNFVPDAYNYTSLIYAFCRHRNLTD 439
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A V + + P+ + I+ + F + E + L K R+ G+ P YR I
Sbjct: 440 ALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIIN 499
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVP 363
GL + + ++ + D V + +I S V ++ A F+ M+++G P
Sbjct: 500 GLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKP 559
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ T ++L LC ++ E+V ++K + D Y ++ C ++ A +
Sbjct: 560 NVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIF 619
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+ M + GL D Y L+ + + A+ L ++M G + ++ TY LI + ++
Sbjct: 620 RGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKI 679
Query: 484 GEIEGALRLFHNMLEKGVAPDA 505
G+ A +++ML+ G+ PDA
Sbjct: 680 GDERKANMTYNSMLQAGITPDA 701
>gi|125557435|gb|EAZ02971.1| hypothetical protein OsI_25111 [Oryza sativa Indica Group]
Length = 728
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 123/517 (23%), Positives = 233/517 (45%), Gaps = 31/517 (5%)
Query: 25 RPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP 84
R ++W P + L +L ++P LVA V++ LAL FF WA +Q F H
Sbjct: 104 RRHQRWGPPVVAELTKL---RRVAPELVAEVLSARPPPPPPLALPFFLWAGRQKGFRHCF 160
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++H++ LS + A D + ++ + + S ++ + +A
Sbjct: 161 PAFHALASLLSAAGLPAAADQLPDLMRAHGKPVSHSQLNLLVRLHTGARRPLRALHALR- 219
Query: 145 VKFNCE-DIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+F E + PE+ CN +L LA+ G++D+ LK+FDEMSH V + F + +
Sbjct: 220 -RFRHEFSVQPEVHACNRVLGALAAAGHVDDTLKLFDEMSHCSVRPMPVTFAIMVRALAR 278
Query: 202 NAKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
++L M+ +R R + + +++ ++ G +G +V +E+R
Sbjct: 279 AGMTDKLLEMIGRMRAEVCRPDVFVYTALVKTMVRWGHMEG-----CIRVWEEMRRDHVD 333
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD +AY + G V + E + + R+ G+ Y I G + R+ + +
Sbjct: 334 PDTMAYTTMIAGLCNAGMVEKAEELFGEMRRKGLLVDRMVYASLIDGYVSTGRVSDGCRV 393
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ +V + D + N LIG + I+ A F ++++ +P+ T+S L L +
Sbjct: 394 LKEMVDAGYRADLGIYNTLIGGLCEIEREDKAHKMFQIVVQEDLIPSSETVSPL---LAR 450
Query: 378 RNKSDELVEVYKVLSANDYFTDME--SYNVMVSFL----CTSGRLREAYGVIQEMKRKGL 431
E+V+ + ++ D ++ ++V FL C SG +A V +R+G
Sbjct: 451 YADKGEMVKFFGLV---DKLVELSLPIVEILVDFLKLFACKSGNELKAVEVFNAFRRRG- 506
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS-GCSGNLKTYNILISKFSEVGEIEGAL 490
V YN L+E + + A L+++M +S C + TY+ +I F + IE A
Sbjct: 507 HYSVGIYNILIENLLKIKERKKALVLFEEMQSSDDCKPDSCTYSHMIPCFVDEENIEEAC 566
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
++ M++ P + Y +L++GLC++ + AA +
Sbjct: 567 SCYNLMMKAVWIPSISAYCALVKGLCKKGEINAAISL 603
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 3/215 (1%)
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
VL AL + +D + F+ M P T + + + L + +D+L+E+ +
Sbjct: 237 VLGAL-AAAGHVD--DTLKLFDEMSHCSVRPMPVTFAIMVRALARAGMTDKLLEMIGRMR 293
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
A D+ Y +V + G + V +EM+R +DPD Y +++ C ++
Sbjct: 294 AEVCRPDVFVYTALVKTMVRWGHMEGCIRVWEEMRRDHVDPDTMAYTTMIAGLCNAGMVE 353
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A++L+ +M G + Y LI + G + R+ M++ G D Y +L+
Sbjct: 354 KAEELFGEMRRKGLLVDRMVYASLIDGYVSTGRVSDGCRVLKEMVDAGYRADLGIYNTLI 413
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
GLC+ A ++F V D++ + +S +
Sbjct: 414 GGLCEIEREDKAHKMFQIVVQEDLIPSSETVSPLL 448
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 79/171 (46%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + + L K + + + + V++ + + D +Y M++ LC +G + +A +
Sbjct: 299 PDVFVYTALVKTMVRWGHMEGCIRVWEEMRRDHVDPDTMAYTTMIAGLCNAGMVEKAEEL 358
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
EM+RKGL D Y SL++ + ++ +M +G +L YN LI E
Sbjct: 359 FGEMRRKGLLVDRMVYASLIDGYVSTGRVSDGCRVLKEMVDAGYRADLGIYNTLIGGLCE 418
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
+ + A ++F ++++ + P + T + LL + + F + +K V
Sbjct: 419 IEREDKAHKMFQIVVQEDLIPSSETVSPLLARYADKGEMVKFFGLVDKLVE 469
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 63/150 (42%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
++ +MV L +G + +I M+ + PDV Y +L++ R + ++W++M
Sbjct: 268 TFAIMVRALARAGMTDKLLEMIGRMRAEVCRPDVFVYTALVKTMVRWGHMEGCIRVWEEM 327
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ Y +I+ G +E A LF M KG+ D Y SL++G +
Sbjct: 328 RRDHVDPDTMAYTTMIAGLCNAGMVEKAEELFGEMRRKGLLVDRMVYASLIDGYVSTGRV 387
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLC 551
V + V+ I +T + LC
Sbjct: 388 SDGCRVLKEMVDAGYRADLGIYNTLIGGLC 417
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 68/149 (45%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
++ + N ++ L +G + + + EM + P + ++ A R + ++
Sbjct: 230 EVHACNRVLGALAAAGHVDDTLKLFDEMSHCSVRPMPVTFAIMVRALARAGMTDKLLEMI 289
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M A C ++ Y L+ G +EG +R++ M V PD YT+++ GLC
Sbjct: 290 GRMRAEVCRPDVFVYTALVKTMVRWGHMEGCIRVWEEMRRDHVDPDTMAYTTMIAGLCNA 349
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFM 547
++ A E+F + +++ R + ++ +
Sbjct: 350 GMVEKAEELFGEMRRKGLLVDRMVYASLI 378
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 74/421 (17%), Positives = 167/421 (39%), Gaps = 51/421 (12%)
Query: 84 PLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
P+++ ++++L+ + + + ++ +++ D VY ++ ++++ + + V+
Sbjct: 266 PVTFAIMVRALARAGMTDKLLEMIGRMRAEVCRPDVFVYTALVKTMVRWGHMEGCIRVWE 325
Query: 144 EVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
E++ + D +++A L + G ++ A ++F EM +G+ + + I +
Sbjct: 326 EMRRDHVDPDTMAYTTMIAGLCNAGMVEKAEELFGEMRRKGLLVDRMVYASLIDGYVSTG 385
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVL-----IIHGFCKGKRVEEAFKVLDELRIRE-- 256
++ +L E M++ A L +I G C+ +R ++A K+ ++ ++E
Sbjct: 386 RVSDGCRVLKE-------MVDAGYRADLGIYNTLIGGLCEIEREDKAHKMF-QIVVQEDL 437
Query: 257 ------CKPDFIAYRIVAEEFKLMGSV----------------FEREVVLKKKRKLGVAP 294
P Y E K G V F + K +L
Sbjct: 438 IPSSETVSPLLARYADKGEMVKFFGLVDKLVELSLPIVEILVDFLKLFACKSGNELKAVE 497
Query: 295 RTNDYR---EFILGL--IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP--- 346
N +R + +G+ I+ + + KE + +V + D + S + P
Sbjct: 498 VFNAFRRRGHYSVGIYNILIENLLKIKERKKALVLFEEMQSSDDCKPDSCTYSHMIPCFV 557
Query: 347 -----RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
A +N M++ +P++S L K LCK+ + + + + K N ME
Sbjct: 558 DEENIEEACSCYNLMMKAVWIPSISAYCALVKGLCKKGEINAAISLVKDCLGNVENGPME 617
Query: 402 -SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
Y + + C S + V+ EM G + Y++++ C+ A+K+
Sbjct: 618 FKYTLTILEACQSKSPEKVIKVVDEMIELGYSIEEIIYSAIIYGFCKYASSTEARKVLST 677
Query: 461 M 461
M
Sbjct: 678 M 678
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 11/153 (7%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMF 177
DS Y +IP + +N ++A S +N + +L+ L G I+ A+ +
Sbjct: 545 DSCTYSHMIPCFVDEENIEEACSCYNLMMKAVWIPSISAYCALVKGLCKKGEINAAISLV 604
Query: 178 DE----MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLII 233
+ + + +EF + + I + C++ +V+ ++DE+ + S+ +I II
Sbjct: 605 KDCLGNVENGPMEFK---YTLTILEACQSKSPEKVIKVVDEMIELGYSI--EEIIYSAII 659
Query: 234 HGFCKGKRVEEAFKVLDELRIRE--CKPDFIAY 264
+GFCK EA KVL +R R + ++I Y
Sbjct: 660 YGFCKYASSTEARKVLSTMRDRNIISEANYIVY 692
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 203/455 (44%), Gaps = 16/455 (3%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S +S++SIL L R+++ ++ + +K + +SS Y II L ++A+ +
Sbjct: 356 SVVSFNSILTCLGKKRKVDEALTLFEAMKKDA-EPNSSTYNIIIDMLCMAGKVEEAYMIR 414
Query: 143 NEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+E++ + P + N ++ L + A +MF+ S RG +++ + I
Sbjct: 415 DEMEH--AGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLI---- 468
Query: 201 ENAKLGQVLSMLDEVRKRENSMING----SVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
LG+ ++ D R EN + G V+ +I F R E+ K+ E+ R
Sbjct: 469 --DGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRG 526
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C+PD + G V + + + + G P Y I GL + E
Sbjct: 527 CQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETS 586
Query: 317 ELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ + F +D NA++ G S A M K PT++T ++ L
Sbjct: 587 SIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGL 646
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
K ++ DE +++ + ++ Y+ ++ GR+ EAY +++EM +KGL P+V
Sbjct: 647 AKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 706
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
+NSLM+A + + + A + M CS N TY+ILI+ V + A +
Sbjct: 707 YTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQE 766
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
M ++G+ P+ TYT+++ GL + N+ A +F +
Sbjct: 767 MQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFER 801
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/491 (21%), Positives = 214/491 (43%), Gaps = 11/491 (2%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
+A FF+ Q +SY S++ L + +++ + + Q++ + + Y +
Sbjct: 270 MAWKFFHELKSQ-GLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTM 328
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHR 183
I + A+ + +++K P + NS+L L +D AL +F+ M +
Sbjct: 329 IMGYGSAGQFENAYKLLDQLKE--RGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMK-K 385
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRV 242
E ++ + + I C K+ + + DE+ E++ + +++ V +++ CK K+
Sbjct: 386 DAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEM---EHAGLFPNLLTVNIMVDRLCKAKKF 442
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
E A+++ + R C P+ + Y + + G+V + + + G Y
Sbjct: 443 EPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSL 502
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGR 361
I + R + ++ + + D +LN + V + D F + G
Sbjct: 503 IRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGF 562
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
+P + + S L L K ++ E ++ + + D +YN +V C SG+L +AY
Sbjct: 563 LPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYE 622
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
V++EMK K + P V+ Y S+++ + D L A L+++ + G N+ Y+ LI F
Sbjct: 623 VLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFG 682
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
+VG I+ A + M++KG+ P+ T+ SL++ L + + A F
Sbjct: 683 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTY 742
Query: 542 ILSTFMISLCR 552
S + LCR
Sbjct: 743 TYSILINGLCR 753
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/457 (19%), Positives = 210/457 (45%), Gaps = 12/457 (2%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+P F+ +Y ++ +++ +RQ +L+Q++ + ++ ++ +L + +
Sbjct: 179 RPAFS----AYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVE 234
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
A ++ +EVK +C + + N + G +D A K F E+ +G++ + + I
Sbjct: 235 GALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMI 294
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
W C+ +L + + ++ + E ++ +I+ G+ + E A+K+LD+L+ R
Sbjct: 295 WVLCKAGRLSEAEELFGQM-ETERAVPCAYAYNTMIM-GYGSAGQFENAYKLLDQLKERG 352
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C P +++ + V E + + +K P ++ Y I L + ++ EA
Sbjct: 353 CIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK-DAEPNSSTYNIIIDMLCMAGKVEEAY 411
Query: 317 EL-GEVIVSGKFT--IDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+ E+ +G F + +++ + +P A F ++G P T +L
Sbjct: 412 MIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEP--AYEMFETASQRGCNPNSVTYCSLID 469
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
L K+ D+ +++ + + + Y ++ GR + + + +EM R+G P
Sbjct: 470 GLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQP 529
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
D++ N+ M+ + + + +++ + G ++++Y+ILI ++ G+ +F
Sbjct: 530 DLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIF 589
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
H M ++G A DA Y ++++G C+ L A+EV +
Sbjct: 590 HAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEE 626
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 171/417 (41%), Gaps = 42/417 (10%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMF 177
+S Y +I L + N A+ +F + + P + SL+ G ++ K+F
Sbjct: 460 NSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIF 519
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFC 237
EM+ RG + ++ + + + ++ ++++ + ++IHG
Sbjct: 520 KEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGY--GFLPDVRSYSILIHGLT 577
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K + E + ++ + D AY V + F G + + VL++ + V P
Sbjct: 578 KAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVA 637
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---GSVSSIDPRSAIVFFN 354
Y I GL R+ EA L E S ++ V ++LI G V ID A +
Sbjct: 638 TYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRID--EAYLILE 695
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M++KG P + T ++L L K + +E + ++ + + +Y+++++ LC
Sbjct: 696 EMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQ 755
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ +A+ QEM+++GL P+V TY
Sbjct: 756 KYNKAFVFWQEMQKQGLVPNVV-----------------------------------TYT 780
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
+I+ ++VG I A LF G PDA ++ +L+EG+ A+ VF ++
Sbjct: 781 TMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEET 837
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 1/249 (0%)
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
E VL++ LG + + L+ RR+ +A+ + + KF LIG+
Sbjct: 132 EKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGA 191
Query: 341 VSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
++ P A+ M E G + + L + L + + + + + + + D
Sbjct: 192 MAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPD 251
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ YNV + +G + A+ E+K +GL PD Y S++ C+ L A++L+
Sbjct: 252 IVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFG 311
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
QM YN +I + G+ E A +L + E+G P ++ S+L L ++
Sbjct: 312 QMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKR 371
Query: 520 NLQAAFEVF 528
+ A +F
Sbjct: 372 KVDEALTLF 380
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 79/162 (48%)
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
++L L + + D+ V + + +Y V++ + + + A ++++M+
Sbjct: 151 ADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQE 210
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
G + V + +L+ A RE + A L D++ S ++ YN+ I F + G ++
Sbjct: 211 VGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDM 270
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
A + FH + +G+ PD +YTS++ LC+ L A E+F +
Sbjct: 271 AWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQ 312
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/247 (18%), Positives = 109/247 (44%), Gaps = 2/247 (0%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
A +Q F +Y++++ S +++ VL+++KV ++ + Y II L +
Sbjct: 591 AMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKID 650
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
+A+ +F E K ++ + +SL+ G ID A + +EM +G+ + +
Sbjct: 651 RLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 710
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
+ + ++ + L +++ + S + ++I+G C+ ++ +AF E++
Sbjct: 711 SLMDALVKAEEINEALICFQSMKEMKCS--PNTYTYSILINGLCRVQKYNKAFVFWQEMQ 768
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+ P+ + Y + +G++ + + ++ + G P + I G+ R
Sbjct: 769 KQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAI 828
Query: 314 EAKELGE 320
EA + E
Sbjct: 829 EAYHVFE 835
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 215/498 (43%), Gaps = 63/498 (12%)
Query: 47 LSPSLVARVINPYLLTHH-SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDS 105
LSP+ V+ V+ L LAL FF WA +Q +TH+ Y S + L+++ ++ + S
Sbjct: 59 LSPNFVSFVLKSMELQKRPDLALKFFTWAGKQKKYTHNLQCYVSSIDVLAINGDLDNVKS 118
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLA 165
V + + ++ S NSL+
Sbjct: 119 VFCKFRGMGFLMNVSA-----------------------------------ANSLIKSFG 143
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR-----EN 220
S G ++ L ++ M GVE S +F + F N G V S+ E +R EN
Sbjct: 144 SLGMVEELLWVWRGMKENGVEPS-----LFTYNFLLN---GLVNSVFIESAERVLEVMEN 195
Query: 221 SMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE------EFKL 273
I V+ +I G+C+ + ++AF+ ++ +R PD I Y + + +F L
Sbjct: 196 GKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDL 255
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
S++ + L + P Y I GL E + E + E ++ ++ +
Sbjct: 256 CLSLYHE----MDENGLEIPPHA--YSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAI 309
Query: 334 LNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
ALI S + + A++ F M ++G P + T + +CK + DE +E +
Sbjct: 310 YTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCR 369
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
N + Y+ ++ L +GR+ EA + +EM +KG PD YN+L++A +
Sbjct: 370 VNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTD 429
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A + +M GC + TY I+I+ + E AL+++ M++KG+ P A + +L
Sbjct: 430 EALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALS 489
Query: 513 EGLCQETNLQAAFEVFNK 530
GLC + A ++ ++
Sbjct: 490 IGLCLSGKVARACKLLDE 507
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 193/432 (44%), Gaps = 9/432 (2%)
Query: 73 WASQQPNFTHSPL-SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQ 131
W + N L +Y+ +L L S I + + VL+ ++ KI D Y +I Q
Sbjct: 155 WRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQ 214
Query: 132 GKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
TQKAF F +++ ++ P+ +L+ ++G D L ++ EM G+E
Sbjct: 215 VGKTQKAFEKFRDMEL--RNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPP 272
Query: 190 IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVL 249
+ + I C+ K + ++ +++ ++ +N ++ LI K + EA +
Sbjct: 273 HAYSLVIGGLCKEGKCVEGYAVFEKMIQK-GCKVNVAIYTALIDSN-AKCGNMGEAMLLF 330
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
+ ++ +PD + Y +V G + E L+ R GVA Y I GL
Sbjct: 331 ERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKA 390
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTL 368
R+ EA++L E +V D NALI +++ A+ FF M ++G T+ T
Sbjct: 391 GRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTY 450
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ + L + +K++E ++++ ++ ++ + LC SG++ A ++ E+
Sbjct: 451 TIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAP 510
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
G+ P+ +F ++ C+ ++ A KL D G + +LI+ + G +
Sbjct: 511 MGVIPETAF-EDMLNVLCKAGRIKEACKLADGFVDRGREIPGRVRTVLINALRKAGNADL 569
Query: 489 ALRLFHNMLEKG 500
AL+L H+ + G
Sbjct: 570 ALKLMHSKIGIG 581
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 77/171 (45%)
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
D + V+ + ++ + N ++ + G + E V + MK G++P + YN L
Sbjct: 114 DNVKSVFCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFL 173
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ + A+++ + M ++ TYN +I + +VG+ + A F +M + V
Sbjct: 174 LNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNV 233
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
APD TY +L++ E + ++++ + + + S + LC+
Sbjct: 234 APDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCK 284
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 185/437 (42%), Gaps = 41/437 (9%)
Query: 155 EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
E N +L V G A K+FD M+ GV GFG + C K+ +V ++L
Sbjct: 39 ETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAA 98
Query: 215 VRKRENSMINGSVIAVL---------------------------------IIHGFCKGKR 241
+ + S+ N + V+ I G CK +
Sbjct: 99 MWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRY 158
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER--EVVLKKKRKLGVAPRTNDY 299
V++AF VL+E+ R KP+ + + + +G ER + LK + P + Y
Sbjct: 159 VKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWT-ERAFRLFLKLIKSSSYKPNVHTY 217
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS---VSSIDPRSAIVFFNFM 356
I G E ++ A+ L +V + + LIG S D A N M
Sbjct: 218 TVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFD--RAFELMNKM 275
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
++G +P + T + + CK+ K E +V ++ ++ D +Y ++++ C G +
Sbjct: 276 KQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHI 335
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
A + M G PD+ Y SL+ C++ + ++K +D+ G +TY +
Sbjct: 336 TYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSM 395
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I+ + +VG ALR+F M++ G D+ TY +L+ GLC+E+ L+ A ++ ++ +
Sbjct: 396 IAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRL 455
Query: 537 MLARSILSTFMISLCRR 553
+ T CRR
Sbjct: 456 VPCEVTRVTLTFEYCRR 472
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 168/404 (41%), Gaps = 8/404 (1%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM- 180
Y I L + + ++AF V E+ +L+ L G+ + A ++F ++
Sbjct: 146 YTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLI 205
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
+ + + V I +C KL + +L VR E + + +I G CKG
Sbjct: 206 KSSSYKPNVHTYTVMIGGYCREGKLARAEMLL--VRMVEQGLKPNTNTYTTLIGGHCKGG 263
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+ AF+++++++ P+ Y V + F G + E VL+ G+ Y
Sbjct: 264 SFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYT 323
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEK 359
I + I A +L + +V D + +LI + + FF+ +
Sbjct: 324 ILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMI 383
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G +PT T +++ CK +S + V++ + N F D +Y ++S LC RL EA
Sbjct: 384 GLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEA 443
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ + M K L P +L CR + A + D++ + T ++++ K
Sbjct: 444 KALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQ---QVHTVDVVVRK 500
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
S +G+++ A +L++ A D TYT + C E N A
Sbjct: 501 LSALGDVDAASLFLKKVLDEDYAVDHATYTGFINS-CYENNRYA 543
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 67/153 (43%)
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+E+ N ++ +G A V M R G+ P + +L+ CCRE + L
Sbjct: 38 VETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLA 97
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
M+ G S + T +++ E G + F MLE G P+ YT+ ++GLC+
Sbjct: 98 AMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRR 157
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++ AF V + V + +T + LC+
Sbjct: 158 YVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCK 190
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 211/484 (43%), Gaps = 35/484 (7%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
LAL FF + F H+PL++ +++ L++ Q++++ +L+Q+K+ ++ +
Sbjct: 57 LALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISV 116
Query: 126 IPSLIQGKNTQKAFSVFNEVK-FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
I Q ++A +F +K F C D +I N +L L + I ++ +M G
Sbjct: 117 ISVYRQVGLAERAVEMFYRIKEFGC-DPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 175
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR---ENSMINGSVIAVL---------- 231
E + + V + C+N K+ +L E+ + N++ +VI+ +
Sbjct: 176 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGR 235
Query: 232 ---------------IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+I+G CK + + +++ E+ + P+ I+Y + E G
Sbjct: 236 QLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQ 295
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL-- 334
+ +L + K G P + + G V +A ++ ++ G F + +V+
Sbjct: 296 IELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRG-FGLQPNVVAY 354
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N L+ G S + A+ F M E G P + T +L KR + V ++ +
Sbjct: 355 NTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLT 414
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ ++ Y MV LC + +EA +I+ M ++ P V +N+ ++ C L
Sbjct: 415 SGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDW 474
Query: 454 AKKLWDQMFAS-GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A+K++ QM C N+ TYN L+ ++ IE A L + +GV +TY +LL
Sbjct: 475 AEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLL 534
Query: 513 EGLC 516
G C
Sbjct: 535 HGSC 538
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 182/412 (44%), Gaps = 36/412 (8%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGV-EFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
+++L L + + AL F +++ + + + + F V I K + ++ V +L +++
Sbjct: 43 SAVLKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMK 102
Query: 217 KR-----ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE--CKPDFIAYRIVAE 269
+ E+ I SVI+V G +R E F RI+E C P Y V +
Sbjct: 103 LQGFHCSEDLFI--SVISVYRQVGL--AERAVEMF-----YRIKEFGCDPSVKIYNHVLD 153
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
+ +V + ++ G P Y + L ++ AK+L V +S K
Sbjct: 154 TLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKL-LVEMSNKGCC 212
Query: 330 DDDV-LNALIGSVSSIDPRSAIVFFNFMIEKGRV------PTLSTLSNLSKNLCKRNKSD 382
+ V +I S+ + M+++GR P +S + L LCK
Sbjct: 213 PNAVSYTTVISSMCEVG----------MVKEGRQLAERFEPVVSVYNALINGLCKERDYK 262
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
VE+ + ++ SY+ +++ L SG++ A+ ++ +M ++G P++ +SL+
Sbjct: 263 GGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLV 322
Query: 443 EACCREDLLRPAKKLWDQMFAS-GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ C A +W+QM G N+ YN L+ F G I+ A+ +F +M E G
Sbjct: 323 KGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGC 382
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+P+ TY SL+ G + +L+ A ++NK + + ++ + +LCR
Sbjct: 383 SPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRH 434
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 210/504 (41%), Gaps = 28/504 (5%)
Query: 61 LTHHSLALGFFNWASQQPNF------------TH--------SPLSYHSILKSLSLSRQI 100
L H LAL F W +QP TH P + ILK LSL
Sbjct: 47 LVHGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARH--ILKELSLMSGK 104
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSL 160
++ + SVY +I ++ Q + +F + + CN++
Sbjct: 105 SSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAI 164
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
L + G + EM R + F + I C + ++ +K E
Sbjct: 165 LGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLM---QKMEK 221
Query: 221 SMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
S +++ ++H +CK R + A ++LD ++ + D Y ++ + + +
Sbjct: 222 SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 281
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
++L+ RK + P Y I G E ++ A +L ++S + + NALI
Sbjct: 282 GYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID 341
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G +S + + A+ F M KG P+ + L LCK + D Y + N
Sbjct: 342 GHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV 401
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+Y M+ LC +G L EA ++ EM + G+DPD+ Y++L+ C+ + AK++
Sbjct: 402 GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 461
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+++ G S N Y+ LI +G ++ A+R++ M+ +G D T+ L+ LC+
Sbjct: 462 CRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKA 521
Query: 519 TNLQAAFEVFNKSVNHDVMLARSI 542
+ A E F + + D +L ++
Sbjct: 522 GKVAEA-EEFMRCMTSDGILPNTV 544
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/478 (22%), Positives = 200/478 (41%), Gaps = 71/478 (14%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ + + ++Y+++L + A +L +K + D Y +I L +
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 279
Query: 136 QKAFSVF----------NEVKFNCED----------IGPEICNSLLAVLAS--------- 166
K + + NEV +N I ++ N +L+ S
Sbjct: 280 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 339
Query: 167 -DGYIDN-----ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
DG+I ALKMF M +G+ S + +GV + C+NA+ L+ +R + N
Sbjct: 340 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFD--LARGFYMRMKRN 397
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
+ G + +I G CK ++EA +L+E+ PD + Y + F +G
Sbjct: 398 GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA 457
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+ ++ + ++G++P G+I I +G +
Sbjct: 458 KEIVCRIYRVGLSPN---------GIIYSTLIYNCCRMGCL------------------- 489
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ AI + MI +G T + L +LCK K E E + ++++ +
Sbjct: 490 ------KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
S++ +++ SG +A+ V EM + G P Y SL++ C+ LR A+K
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ A + + YN L++ + G + A+ LF M+++ + PD+ TYTSL+ GLC++
Sbjct: 604 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 661
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 112/522 (21%), Positives = 207/522 (39%), Gaps = 62/522 (11%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
F S + ++IL S+ S + ++ S LK++ KI D + + +I L + +K+
Sbjct: 154 FNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSS 213
Query: 140 SVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
+ K P I N++L G A+++ D M +GV+ + + I
Sbjct: 214 YLMQ--KMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIH 271
Query: 198 KFCENAKLGQVLSMLDEVRKR--------ENSMING------------------------ 225
C + ++ + +L ++RKR N++ING
Sbjct: 272 DLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSP 331
Query: 226 -SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE------EFKLMGSVF 278
V +I G +EA K+ + + P ++Y ++ + EF L
Sbjct: 332 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL----- 386
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV----SGKFTIDDDVL 334
R ++ KR GV Y I GL C+ L E +V K ID D++
Sbjct: 387 ARGFYMRMKRN-GVCVGRITYTGMIDGL------CKNGFLDEAVVLLNEMSKDGIDPDIV 439
Query: 335 --NALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
+ALI + ++A + G P S L N C+ E + +Y+ +
Sbjct: 440 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 499
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+ D ++NV+V+ LC +G++ EA ++ M G+ P+ ++ L+
Sbjct: 500 ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEG 559
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A ++D+M G TY L+ + G + A + ++ A D Y +L
Sbjct: 560 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 619
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
L +C+ NL A +F + V ++ ++ + LCR+
Sbjct: 620 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 661
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 102/544 (18%), Positives = 221/544 (40%), Gaps = 46/544 (8%)
Query: 54 RVINPYLLTHHSLALGFFN-----WASQQPN----FTHSP--LSYHSILKSLSLSRQINA 102
R+I+P +T+++L GF N ASQ N F SP +++++++
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLA 162
+ ++ +T Y ++ L + A + +K N +G ++
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG---QVLSMLDEVRKRE 219
L +G++D A+ + +EMS G++ + + I FC+ + +++ + V
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471
Query: 220 NSMINGSVI----------------AVLIIHG--------------FCKGKRVEEAFKVL 249
N +I ++I +I+ G CK +V EA + +
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
+ P+ +++ + + G + V + K+G P Y + GL
Sbjct: 532 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTL 368
+ EA++ + + + +D + N L+ ++ S + A+ F M+++ +P T
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSA-NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
++L LC++ K+ + K A + + Y V + +G+ + ++M
Sbjct: 652 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 711
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
G PD+ N++++ R + L +M NL TYNIL+ +S+ ++
Sbjct: 712 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 771
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
+ L+ +++ G+ PD T SL+ G+C+ L+ ++ + V + R + +
Sbjct: 772 TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 831
Query: 548 ISLC 551
C
Sbjct: 832 SKCC 835
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 118/556 (21%), Positives = 222/556 (39%), Gaps = 70/556 (12%)
Query: 45 DSLSPSLVAR--VINPYLLTHHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQI 100
D + P+ V+ +IN Y + L F+ + H P +Y S+LK L +
Sbjct: 537 DGILPNTVSFDCLINGY--GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICN 158
+ LK + +D+ +Y ++ ++ + N KA S+F E+ I P+
Sbjct: 595 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQ--RSILPDSYTYT 652
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRG------VEFSTIGFGVFIWKFCENAKLGQVLSML 212
SL++ L G A+ E RG V ++ G+F K GQ + +
Sbjct: 653 SLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMF--------KAGQWKAGI 704
Query: 213 DEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
+ +N ++ +I G+ + ++E+ +L E+ + P+ Y I+ +
Sbjct: 705 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 764
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL-----------IVERRICEAKEL-- 318
V ++ + G+ P +LG+ I++ IC E+
Sbjct: 765 SKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDR 824
Query: 319 -------------GE---------VIVSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFN 354
GE V+ S ++D D +A++ SV + + R + + +
Sbjct: 825 YTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMV-SVLNRNHRFQESRMVLH 883
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M ++G P L LC+ V + + A+ + + MV L G
Sbjct: 884 EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG 943
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ EA +++ M + L P ++ + +LM CC+ + A +L M G +L +YN
Sbjct: 944 KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1003
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG-LCQETNLQAAFEVFNKSVN 533
+LI+ G++ A L+ M G +ATTY +L+ G L +ET A +
Sbjct: 1004 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKD--- 1060
Query: 534 HDVMLARSILSTFMIS 549
+LAR +++ +S
Sbjct: 1061 ---LLARGFITSMSLS 1073
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/458 (19%), Positives = 181/458 (39%), Gaps = 39/458 (8%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
T +++ ++ SL + ++ + ++ + + I ++ + +I KAFS
Sbjct: 505 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 564
Query: 141 VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
VF+E+ SLL L G++ A K + T+ + + C
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 624
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFC-KGKRVEEAFKVLDELRIRECKP 259
++ L + +S+ E+ +R S++ S +I G C KGK V
Sbjct: 625 KSGNLAKAVSLFGEMVQR--SILPDSYTYTSLISGLCRKGKTV----------------- 665
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
IA + A+E + G+V +V+ Y F+ G+ +
Sbjct: 666 --IAI-LFAKEAEARGNVLPNKVM---------------YTCFVDGMFKAGQWKAGIYFR 707
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
E + + T D NA+I S + M + P L+T + L KR
Sbjct: 708 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 767
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+Y+ + N D + + +V +C S L +++ +G++ D +
Sbjct: 768 KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 827
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
N L+ CC + A L M + G S + T + ++S + + + + H M +
Sbjct: 828 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 887
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+G++P++ Y L+ GLC+ +++ AF V + + H +
Sbjct: 888 QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 925
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 195/454 (42%), Gaps = 39/454 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+ ++ L + + + +++K N+ +D Y +I L N A V+ E
Sbjct: 256 VTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKE 315
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + N+LL G I + +++ M + + + +FI EN K
Sbjct: 316 MVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRK 374
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ + +S+ + +R+R S + + VLI HG CK + +A K+L E + K D AY
Sbjct: 375 VEEAISVWELLRRR-GSGADSTTYGVLI-HGLCKNGHLNKALKILKEAKDGGDKLDAFAY 432
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + G V E LG+ + + Y CE
Sbjct: 433 SSIVDGLSKQGRVDE---------ALGIVHQMDKYG------------CE---------- 461
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ V N LI G V + AI FF M KG PT+ + + L LCK + +
Sbjct: 462 ----LSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSD 517
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
K + D+ DM +Y++++ LC ++ A + +++ KGL+PDV+ +N LM
Sbjct: 518 AYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMH 577
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C + A L+ M S C NL T+N L+ + E E A ++ M + G P
Sbjct: 578 GLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQP 637
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
D +Y L+GLC + +F+ ++ + ++
Sbjct: 638 DIISYNITLKGLCSCGRISDGIALFDDALKNGIL 671
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 196/467 (41%), Gaps = 74/467 (15%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL F+ AS+QP +THSP + IL+ LS + + + +++ +K K V ++
Sbjct: 26 ALALFDSASRQPGYTHSPHIFLLILRRLSDPKLVVHVTRIVELIKTQKCKCTEDVVLTVL 85
Query: 127 PSLIQGKNTQKAFSVFNEVK--FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
+ + K +A F +++ F C+ G N+LL ++ A
Sbjct: 86 KAYAKSKMPNEALDCFQKMEEIFGCKP-GIRSYNALLNAFIEANLLEKAESFL------- 137
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
F T+G +L L + N +I SV K ++ E
Sbjct: 138 AYFETVG----------------ILPNL----QTYNILIKISV----------KKRQFVE 167
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A +LD + ++ KPD +Y V G + V + + G+ P Y I
Sbjct: 168 AKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMID 227
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT 364
G + KE+ E +V G S + P +V +N MI
Sbjct: 228 GFFKRGDYVQGKEIWERLVKG----------------SCVYPN--VVTYNVMI------- 262
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
LCK + DE +E+++ + N+ D+ +Y+ ++ LC G + A V +
Sbjct: 263 --------NGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYK 314
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
EM ++ + DV YN+L+ CR ++ + +LW M C N+ +YNI I E
Sbjct: 315 EMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENR 373
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
++E A+ ++ + +G D+TTY L+ GLC+ +L A ++ ++
Sbjct: 374 KVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEA 420
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 154/369 (41%), Gaps = 41/369 (11%)
Query: 73 WASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQG 132
W H+ +SY+ ++ L +R++ SV + ++ DS+ Y +I L +
Sbjct: 348 WVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKN 407
Query: 133 KNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
+ KA + E K + + +S++ L+ G +D AL + +M G E S
Sbjct: 408 GHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVC 467
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDE 251
I F +KL + + R+ E + +V++ +I+G CK +R +A+ + E
Sbjct: 468 NPLINGFVRASKLEEAICFF---REMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKE 524
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ ++ KPD I Y ++ + GL ++
Sbjct: 525 MLEKDWKPDMITYSLLMD-----------------------------------GLCQGKK 549
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
I A L ++ D + N L+ G S+ A++ ++ M + +P L T +
Sbjct: 550 IDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNT 609
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L L K + + ++ + N + D+ SYN+ + LC+ GR+ + + + + G
Sbjct: 610 LMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNG 669
Query: 431 LDP-DVSFY 438
+ P +++Y
Sbjct: 670 ILPTSITWY 678
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 113/486 (23%), Positives = 206/486 (42%), Gaps = 36/486 (7%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S L++++++ LS ++ + +L Q+ ++ D Y +I + +N AF VF
Sbjct: 197 SLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVF 256
Query: 143 NE-VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ VK C D ++L+ L ++G +D AL M +EM +G+E + + + I C
Sbjct: 257 DRMVKEGC-DPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCA 315
Query: 202 NAKLGQVLSMLDEVRKR---------------------------------ENSMINGSVI 228
+ + ++ ++KR + ++ +V
Sbjct: 316 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVT 375
Query: 229 AVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+I+ C G R A K+ + + Y + + L G + + V+ +K
Sbjct: 376 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 435
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-R 347
K+G P Y I G + + + A L +++ D+ N L+ S
Sbjct: 436 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 495
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
SA +F M+E G P + + L K K D + + K + ++ESYN ++
Sbjct: 496 SASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVI 555
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+ L R EA + +M +GL P+V Y +L++ CR + A K++ M C
Sbjct: 556 NGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL 615
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
NL TY+ LI + G+ + A L M KG+APD T+TSL++G + AF +
Sbjct: 616 PNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLL 675
Query: 528 FNKSVN 533
+ V+
Sbjct: 676 LRRMVD 681
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 125/577 (21%), Positives = 228/577 (39%), Gaps = 86/577 (14%)
Query: 47 LSPSLVARVINPYLLTHHSL--ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAID 104
LSP L A + + H + FF W S++P + H+ + S+L L R D
Sbjct: 69 LSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPAD 128
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
+ ++ + K + R + L + FS+++ CN+LL L
Sbjct: 129 HI--RILMIKACRNEEEIRRVADFLNEISGMGFGFSLYS-------------CNTLLIQL 173
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK-------LGQVLS------- 210
A ++ A ++ +M + G++ S + F I + K L Q+
Sbjct: 174 AKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDV 233
Query: 211 ------MLDEVRKRENSMING-------------SVIAVLIIHGFCKGKRVEEAFKVLDE 251
+L R R + G SV +I+G C RV+EA +L+E
Sbjct: 234 FTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEE 293
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL----- 306
+ + +P Y + + E ++ + +K G P Y I GL
Sbjct: 294 MIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK 353
Query: 307 ---------------IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS--------- 342
+V + + E+ V G+F+ + + + G S
Sbjct: 354 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 413
Query: 343 -------SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
D A+V F M++ G +PT+ T + L + + + ++ N
Sbjct: 414 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 473
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D +YN +VS G+L A QEM GL+P+ Y +L++ ++ + A
Sbjct: 474 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIAL 533
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L +M GC+ N+++YN +I+ S+ A ++ M+E+G+ P+ TYT+L++GL
Sbjct: 534 SLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGL 593
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
C+ Q AF++F+ + S+ + LC+
Sbjct: 594 CRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ 630
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 161/386 (41%), Gaps = 8/386 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +++ LS ++ + ++ + ++ Y +I L G A +F+ +
Sbjct: 340 TYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM 399
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + + N ++ L G I+ A+ +F++M G + + + I + +
Sbjct: 400 EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNV 459
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+LD ++ EN ++ GF K ++E A E+ P+ ++Y
Sbjct: 460 NNAARLLDLMK--ENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYT 517
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + G V +LK+ ++G P Y I GL E R EA+++ + +V
Sbjct: 518 ALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQ 577
Query: 326 KFTIDDDVLNALIGSVSSIDPRSAIVF--FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ LI + + R+ F F+ M ++ +P L T S+L LC+ K+DE
Sbjct: 578 GLLPNVITYTTLIDGLCR-NGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 636
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ K + D ++ ++ GR+ A+ +++ M G P+ Y+ L++
Sbjct: 637 AEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLK 696
Query: 444 ACCREDLLRPAK--KLWDQMFASGCS 467
+E LL K L D F GC+
Sbjct: 697 GLQKECLLLEEKIFPLVDNYFL-GCN 721
>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
Length = 795
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 169/367 (46%), Gaps = 4/367 (1%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
++A+ +FD + GV +G I ++ K+ + +++ D+++ E + V
Sbjct: 381 EDAIALFDLVVDTGVP-DVFTYGCLIHWLSKHHKVHEAVNLWDKMK--EAGVKPSIVTCH 437
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++ G+C+ ++EA K+ E+ + P+ + Y + + + + + +L + +
Sbjct: 438 SLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQN 497
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
GV+ Y I GL + R+CE E+ + VS F N++I G V + SA
Sbjct: 498 GVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSA 557
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ + M EKG P + T ++ C+ N D V++ + N D+ +YN ++
Sbjct: 558 LAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINM 617
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
C G + A + + + GL P+V+ YNS + ++ A K + M + +
Sbjct: 618 FCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAAD 677
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ Y LI FS+VG + AL L+ ML PD T+T+L GLC+ ++ A + +
Sbjct: 678 TEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLD 737
Query: 530 KSVNHDV 536
DV
Sbjct: 738 DMTRLDV 744
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 146/353 (41%), Gaps = 14/353 (3%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G I AL +FDE GV + + + V I K C+ M DE K MI +
Sbjct: 308 GEIGKALDLFDEAVRDGVTPTNVTYTVLI-KGCDAE------GMTDETYKLCRQMIEQGL 360
Query: 228 IAV-----LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+ L+I G + K+ E+A + D L + PD Y + V E
Sbjct: 361 LPSTYEFNLVIKGLLRNKQWEDAIALFD-LVVDTGVPDVFTYGCLIHWLSKHHKVHEAVN 419
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSV 341
+ K ++ GV P +LG + + EA +L + F ++ L+ G +
Sbjct: 420 LWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYI 479
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
A N M + G T + L LC ++ E+ E+ K + +
Sbjct: 480 KKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTM 539
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN +++ +G + A + ++M KG+ P++ Y S ++ CR + A KL M
Sbjct: 540 TYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYM 599
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+G ++ YN I+ F + G + AL +L+ G+ P+ T Y S + G
Sbjct: 600 RCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTG 652
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 174/427 (40%), Gaps = 46/427 (10%)
Query: 131 QGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTI 190
+G + A ++F+E++ ++ + ++ +A+++FDEM+ GV+
Sbjct: 165 RGASAADALTLFDEMRCKGYYADAKMYDVVMRACVVGRMHGDAVRLFDEMAGAGVKPDER 224
Query: 191 GFGVFIWKFC---ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
+ + I C + + QVL + E + SV+ VL+ K R++EA +
Sbjct: 225 VYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVVDVLV-----KVGRMDEALR 279
Query: 248 VLDELRIRECKP-DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
+ D++ + K D + + + L G + + + + + GV P Y I G
Sbjct: 280 LKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGC 339
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTL 365
E E +L ++ N +I G + + AI F+ +++ G VP +
Sbjct: 340 DAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTG-VPDV 398
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
T L L K +K E V ++ + + + + ++ C G + EA + E
Sbjct: 399 FTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSE 458
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL--------- 476
M KG P+ Y +LM+ ++ A L ++M +G S TYNIL
Sbjct: 459 MPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDR 518
Query: 477 --------------------------ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
I+ F + G + AL ++ M EKG+ P+ TYTS
Sbjct: 519 VCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTS 578
Query: 511 LLEGLCQ 517
++G C+
Sbjct: 579 FIDGYCR 585
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 158/395 (40%), Gaps = 9/395 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALK 175
D Y +I L + +A ++++++K + P I C+SLL G +D ALK
Sbjct: 397 DVFTYGCLIHWLSKHHKVHEAVNLWDKMKE--AGVKPSIVTCHSLLLGYCEKGCMDEALK 454
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
++ EM +G + + + + + + + ++L+E+ +N + G ++I+G
Sbjct: 455 LYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMH--QNGVSCGEYTYNILING 512
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
C RV E ++L P + Y + F G + + ++ + G+ P
Sbjct: 513 LCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPN 572
Query: 296 TNDYREFILGLIVERRICE-AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFF 353
Y FI G C+ A +L + D NA I S A+ F
Sbjct: 573 IVTYTSFIDGY-CRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFL 631
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
+++ G P ++ ++ E + Y + D E Y ++
Sbjct: 632 VLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKV 691
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G + A + EM PD + +L CR + AK+L D M N TY
Sbjct: 692 GNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTY 751
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
N+LI+ G+++ A +L ML GV PD TTY
Sbjct: 752 NMLINAHIRDGKLQEAFQLHDKMLSSGVVPDDTTY 786
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 154/391 (39%), Gaps = 27/391 (6%)
Query: 56 INPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKI 115
+ P ++T HSL LG+ ++L L ++ K N++
Sbjct: 429 VKPSIVTCHSLLLGYCEKGCMD--------------EALKLYSEMPG-----KGFPPNEV 469
Query: 116 TLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALK 175
T Y ++ I+ K KA+++ NE+ N G N L+ L + +
Sbjct: 470 T-----YTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDE 524
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
M G +T+ + I F + +G L+M ++ E + V I G
Sbjct: 525 MLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMC--EKGITPNIVTYTSFIDG 582
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
+C+ + A K+L +R PD AY F G++ L K G+ P
Sbjct: 583 YCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPN 642
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFN 354
Y F+ G + + EA + ++ + D ++ LI S + + A+ ++
Sbjct: 643 VTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYS 702
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+ +P T + L+ LC+ D + ++ D + +YN++++ G
Sbjct: 703 EMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDG 762
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
+L+EA+ + +M G+ PD + YN C
Sbjct: 763 KLQEAFQLHDKMLSSGVVPDDTTYNIFPLTC 793
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 151/353 (42%), Gaps = 7/353 (1%)
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
A L++ DE+R + + + +++ G+ +A ++ DE+ KPD
Sbjct: 166 GASAADALTLFDEMRCK--GYYADAKMYDVVMRACVVGRMHGDAVRLFDEMAGAGVKPDE 223
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE- 320
Y I + VL K R+ G+ PR Y + L+ R+ EA L +
Sbjct: 224 RVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQ 283
Query: 321 -VIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
++ +GK +D + L+ G + A+ F+ + G PT T + L K
Sbjct: 284 MLLATGK-KMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAE 342
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+DE ++ + + +N+++ L + + +A + + G+ PDV Y
Sbjct: 343 GMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV-PDVFTY 401
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
L+ + + A LWD+M +G ++ T + L+ + E G ++ AL+L+ M
Sbjct: 402 GCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPG 461
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
KG P+ TYT+L++G ++ A+ + N+ + V + + LC
Sbjct: 462 KGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLC 514
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 94/201 (46%), Gaps = 4/201 (1%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
++ M+ +G VP + ++L + + + + ++ + Y+ D + Y+V++ C
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMR-ACV 199
Query: 413 SGRLR-EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
GR+ +A + EM G+ PD Y + C+ A ++ +M +G
Sbjct: 200 VGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDF 259
Query: 472 TYNILISKFSEVGEIEGALRLFHNM-LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TYN ++ +VG ++ ALRL M L G D T+L++G C + A ++F++
Sbjct: 260 TYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDE 319
Query: 531 SVNHDVMLARSILSTFMISLC 551
+V D + ++ T +I C
Sbjct: 320 AV-RDGVTPTNVTYTVLIKGC 339
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 182/398 (45%), Gaps = 7/398 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ +A D + + ++M G+ + + + I FC +++ L++L ++ K
Sbjct: 89 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E S++ S + ++G+C GKR+ +A ++D++ +PD I + + L
Sbjct: 149 LGYEPSIVTLSSL----LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E ++ + + G P Y + GL I A L + + K + + +
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 336 ALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I S+ A+ F M KG P + T S+L LC + + + +
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ ++N ++ G+L EA + EM ++ +DPD+ Y+SL+ C D L A
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K +++ M + C N+ TYN LI+ F + I+ + LF M ++G+ + TYT+L+ G
Sbjct: 385 KHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHG 444
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
Q + A VF + V+ V +T + LC+
Sbjct: 445 FFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 169/372 (45%), Gaps = 29/372 (7%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV-IAVL 231
A+ + D M RG + + + +GV + C+ + ++L+ K E + I +V I
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN---KMEAAKIEANVVIYST 265
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV----------AEEFKLMGSVFERE 281
+I CK + ++A + E+ + +P+ I Y + ++ +L+ + ER+
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIG 339
+ P + I + E ++ EA++L + ++ K +ID D+ ++LI
Sbjct: 326 I----------NPNVVTFNALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTYSSLIN 373
Query: 340 SVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
D A F MI K P + T + L CK + DE VE+++ +S
Sbjct: 374 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+ +Y ++ + A V ++M G+ P++ YN+L++ C+ L A ++
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ + S + TYNI+I + G++E LF ++ KGV PD Y +++ G C++
Sbjct: 494 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Query: 519 TNLQAAFEVFNK 530
+ A +F K
Sbjct: 554 GLKEEADALFRK 565
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 153/346 (44%), Gaps = 5/346 (1%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L G ID A + ++M +E + + + I C+ L++ E+ EN +
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM---ENKGV 291
Query: 224 NGSVIAVL-IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+VI +I C +R +A ++L ++ R+ P+ + + + + F G + E E
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSV 341
+ + K + P Y I G + R+ EAK + E+++S + N LI G
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ + F M ++G V T + L + D V+K + ++ ++
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN ++ LC +G+L +A V + ++R ++P + YN ++E C+ + L+ +
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
G ++ YN +IS F G E A LF M E G PD+ T
Sbjct: 532 SLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 156/347 (44%), Gaps = 5/347 (1%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
Y ++ L + + AF++ N+++ + I ++++ L + D+AL +F EM
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKG 239
++GV + I + I C + +L ++ +R+ IN +V+ +I F K
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK---INPNVVTFNALIDAFVKE 343
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
++ EA K+ DE+ R PD Y + F + + E + + + P Y
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIE 358
I G +RI E EL + + LI G + D +A + F M+
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
G P + T + L LCK K ++ + V++ L + + +YN+M+ +C +G++ +
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+ + + KG+ PDV YN+++ CR+ L A L+ +M G
Sbjct: 524 GWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 100/221 (45%)
Query: 332 DVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
D L + S+ AI F M++ +P++ + L + K K D ++ + + +
Sbjct: 52 DYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM 111
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
++ +YN++++ C ++ A ++ +M + G +P + +SL+ C +
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A L DQM G + T+ LI + A+ L M+++G P+ TY +
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ GLC+ ++ AF + NK + I ST + SLC+
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCK 272
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 174/385 (45%), Gaps = 40/385 (10%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D A + M +GV+ S + + V ++ C N ++ + + + + + +R ++ V
Sbjct: 211 LDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVER--GIVADEVTY 268
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+++GFC+ + +E A ++ D++ P + + + + G + + + +
Sbjct: 269 RTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGE 328
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSA 349
LG+ P I L +RR EA+ L
Sbjct: 329 LGMVPNLFACNALIDKLCKDRRFREAERL------------------------------- 357
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F M +G P T + L +LCKR D+ + ++ + + YN +++
Sbjct: 358 ---FRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLING 414
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
C +A G++ EM KGL P + Y+ L+ CR+ L A +L +M +G SGN
Sbjct: 415 YCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGN 474
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ T+ LIS F + G ++ A RLF M++ V P+ T+ ++EG C+ N++ AF++++
Sbjct: 475 VYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYD 534
Query: 530 KSVNH----DVMLARSILSTFMISL 550
+ V+ D RS++S ++L
Sbjct: 535 QMVDRGLTPDNYTYRSLISVLCLTL 559
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 200/456 (43%), Gaps = 10/456 (2%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PN + HS+ K + + D +++ I + Y +I Q N
Sbjct: 367 EPNEVTYAILIHSLCKRGMMDDALCMFD----RMREKGIRVTVYPYNSLINGYCQHDNFH 422
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+A + NE+ + L+A L G + +A+++ EM+ GV + F I
Sbjct: 423 QARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLI 482
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
FC++ + + + D++ ++S++ V ++I G+C+ V +AF++ D++ R
Sbjct: 483 SGFCKDGNMDEAARLFDKMI--DSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRG 540
Query: 257 CKPDFIAYRIVAEEFKL-MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
PD YR + L +G++ +E V + V + + G E R+ E
Sbjct: 541 LTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNC-VVLNSFSLTTLMYGFCKEGRLTET 599
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+ + + + +D ++ + + D V F M EKG P + +
Sbjct: 600 YHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDV 659
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
K + + + + A+ ++ +Y V+++ LC SG L A + +EM P+
Sbjct: 660 HSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPN 719
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
YN ++ E L AK L + GC N T+N LI F + G+I+GA+ L
Sbjct: 720 SFTYNCFLDFLANEGELEKAKVLHATIL-EGCLANTVTFNTLIKGFCKAGQIQGAIDLMQ 778
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
N E G PD +Y++++ LC+ ++ AF+++N+
Sbjct: 779 NNTESGFFPDCISYSTIINELCKVGDINKAFQLWNE 814
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 178/436 (40%), Gaps = 47/436 (10%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN+L+ L D A ++F M++RG+E + + + + I C+ + L M D +R
Sbjct: 338 CNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMR 397
Query: 217 KRENSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
++ G + V +I+G+C+ +A +L+E+ + P +Y +
Sbjct: 398 EK------GIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLC 451
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
G + + ++ + GV+ + I G + + EA L + ++ ++
Sbjct: 452 RKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEV 511
Query: 333 VLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
N +I G + R A ++ M+++G P T +L LC + + E L
Sbjct: 512 TFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDL 571
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGV----------------------------- 422
N + S ++ C GRL E Y +
Sbjct: 572 ENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDG 631
Query: 423 ------IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
+EMK KG+ PD F+ +++ +E+ + A WD+M A GCS N+ TY +L
Sbjct: 632 EKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVL 691
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I+ + G + A L ML P++ TY L+ L E L+ A +V + ++
Sbjct: 692 INHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKA-KVLHATILEGC 750
Query: 537 MLARSILSTFMISLCR 552
+ +T + C+
Sbjct: 751 LANTVTFNTLIKGFCK 766
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 157/384 (40%), Gaps = 44/384 (11%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-L 231
A +FDEM + I +CE L +L + E+ + GS + +
Sbjct: 179 ARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLT---RMESKGVKGSAVPYNV 235
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+++G C+ RV EA +V K + IVA+E
Sbjct: 236 LMYGLCRNNRVLEAVEV---------KNSMVERGIVADEVT------------------- 267
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRS 348
YR + G + A E+ + ++S F + ++ + ID
Sbjct: 268 -------YRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHID--K 318
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A + E G VP L + L LCK + E +++ ++ + +Y +++
Sbjct: 319 AFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIH 378
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G + +A + M+ KG+ V YNSL+ C+ D A+ L ++M G +
Sbjct: 379 SLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAP 438
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ +Y+ LI+ G++ A+ L M GV+ + T+T+L+ G C++ N+ A +F
Sbjct: 439 SAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLF 498
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
+K ++ V+ + + CR
Sbjct: 499 DKMIDSSVVPNEVTFNVMIEGYCR 522
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/512 (20%), Positives = 187/512 (36%), Gaps = 69/512 (13%)
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
IL +L RQ + ++ K LD VY I + + +N A + ++
Sbjct: 166 ILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKG 225
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
N L+ L + + A+++ + M RG+ + + ++ FC +L L
Sbjct: 226 VKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMAL 285
Query: 210 SMLDE-------------------VRKR--------------ENSMINGSVIAVLIIHGF 236
M D+ +RKR E M+ +I
Sbjct: 286 EMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKL 345
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
CK +R EA ++ + R +P+ + Y I+ G + + + + R+ G+
Sbjct: 346 CKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTV 405
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNF 355
Y I G +A+ L +V + LI G D SA+
Sbjct: 406 YPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHRE 465
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M G + T + L CK DE ++ + + + ++NVM+ C G
Sbjct: 466 MARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGN 525
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNS----------------------------------- 440
+R+A+ + +M +GL PD Y S
Sbjct: 526 VRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTT 585
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
LM C+E L +WD+M A G +L ++ +++ ++ + E LF M EKG
Sbjct: 586 LMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKG 645
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
V PD +T +++ +E N+ A ++K +
Sbjct: 646 VKPDNVFHTCMIDVHSKEENIVQALNCWDKMI 677
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/451 (18%), Positives = 177/451 (39%), Gaps = 33/451 (7%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y+S++ + +L ++ + ++ Y +I L + + A + E+
Sbjct: 408 YNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMA 467
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
N +L++ DG +D A ++FD+M V + + F V I +C +
Sbjct: 468 RNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVR 527
Query: 207 QVLSMLDEVRKR---ENSMINGSVIAVL------------------------------II 233
+ + D++ R ++ S+I+VL ++
Sbjct: 528 KAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLM 587
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
+GFCK R+ E + + DE+R R K D I++ ++ + + V+ ++ ++ GV
Sbjct: 588 YGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVK 647
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFF 353
P + I E I +A + +++ + + LI + S+
Sbjct: 648 PDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQIL 707
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
+ GR S N + E +V + ++N ++ C +
Sbjct: 708 CEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKA 767
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G+++ A ++Q G PD Y++++ C+ + A +LW++M G ++ Y
Sbjct: 768 GQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAY 827
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
NILI + GE + L ++ +M+ A D
Sbjct: 828 NILIRWCNIHGEFDKGLGIYSDMVNLKYADD 858
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 129/307 (42%), Gaps = 36/307 (11%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---- 338
VL+ G+A + + + LI R+ A++L + +V KF +D+ V A I
Sbjct: 147 VLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYC 206
Query: 339 ------------------GSVSSIDPRSAIVFF--------------NFMIEKGRVPTLS 366
G S P + +++ N M+E+G V
Sbjct: 207 EIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEV 266
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T L C+ + + +E+ + + + + S + MV L G + +A+ + +
Sbjct: 267 TYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHL 326
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
G+ P++ N+L++ C++ R A++L+ M G N TY ILI + G +
Sbjct: 327 GELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMM 386
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
+ AL +F M EKG+ Y SL+ G CQ N A + N+ V + + + S
Sbjct: 387 DDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPL 446
Query: 547 MISLCRR 553
+ LCR+
Sbjct: 447 IAGLCRK 453
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/537 (20%), Positives = 219/537 (40%), Gaps = 78/537 (14%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
S LGFF+ + F H+ +Y +++ L +++ + +L+Q+K++ I ++
Sbjct: 55 SSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFIC 114
Query: 125 IIPSLIQGKNTQKAFSVFNEV-KFNCED--------------------IGPEICNS---- 159
II + + ++A +F + +F C+ I P N
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDG 174
Query: 160 ----------LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
LL L + +D A K+F EMS++G + + + C+ K+
Sbjct: 175 LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKI---- 230
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
D+ R+ + +I G CK R+E A K+L E+ P+ ++Y +
Sbjct: 231 ---DDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
+ G+V + + G + + I G + ++ EA +L ++++
Sbjct: 288 SLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEP 347
Query: 330 DDDVLNALI------------------------------------GSVSSIDPRSAIVFF 353
+ N LI G S D A +
Sbjct: 348 NVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETW 407
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
N MI G P + T + + LCK + D+ + + ++ + ++N + LC +
Sbjct: 408 NRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGN 467
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
GR+ A +++ M+ G P+++ YN L++A R + A L+ ++ A NL TY
Sbjct: 468 GRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTY 527
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
N ++ FS G + AL+LF L +G APD+ TY +++ C++ ++ A ++ +
Sbjct: 528 NTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVER 584
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 97/458 (21%), Positives = 183/458 (39%), Gaps = 72/458 (15%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
F S Y++++ + +I +L ++ N + + Y II SL N + AF
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
++F ++ D L+ G + AL ++ M G E + + + I
Sbjct: 300 ALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGL 359
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
C N L + L + D++ +R + N + ++LI GF K + A + + + C+P
Sbjct: 360 CSNGSLEEALQVCDQM-QRSGCLPNVTTYSILI-DGFAKSGDLVGASETWNRMISHGCRP 417
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKL-GVAPRTNDYREFILGLIVERRICEAKEL 318
+ + Y + + S+F++ L +K L G P T + FI GL R+ A +L
Sbjct: 418 NVVTYTCMVDVL-CKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKL 476
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
E M G +P ++T + L L +
Sbjct: 477 LER----------------------------------MQGHGCLPNITTYNELLDALFRM 502
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
NK +E +++ + A + ++ +YN ++ +G + EA + + +G PD Y
Sbjct: 503 NKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITY 562
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
N+++ A C++ G +K L+ + S + E +H
Sbjct: 563 NTMIHAYCKQ-------------------GKVKIAAQLVERVSSMKE-------WH---- 592
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
PD TYTSL+ G C N++ A +K++N +
Sbjct: 593 ----PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGI 626
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 77/175 (44%)
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
RN S L + ++N + +Y VM+ L + ++Q+MK G++
Sbjct: 52 RNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDL 111
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
+ ++ R A K++ ++ GC ++ YN L+ + + L+ NM
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ G+ P+ TY LL+ LC+ + AA ++F + N +T + SLC+
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCK 226
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/215 (18%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
T + +++++ +K L + ++ +L++++ + + + Y ++ +L + ++AF
Sbjct: 451 TPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFG 510
Query: 141 VFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+F E++ ++ P + N++L + G + AL++F + RG +I + I
Sbjct: 511 LFQEIE--ARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHA 568
Query: 199 FCENAKL---GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
+C+ K+ Q++ + +++ +I + +I G C +EEA LD+ +
Sbjct: 569 YCKQGKVKIAAQLVERVSSMKEWHPDIITYTS----LIWGACNWMNIEEAMAFLDKAINQ 624
Query: 256 ECKPDFIAY----RIVAEEFKLMGSVFEREVVLKK 286
P+F + R + MG + + +L+K
Sbjct: 625 GICPNFATWNALVRCFFDSLGHMGPIHILDDILRK 659
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 194/407 (47%), Gaps = 17/407 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ + D + + +M G+ F + I FC ++ LS+L ++ K
Sbjct: 89 NRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLK 148
Query: 218 ---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+ + GS +++GFC+ RV +A ++D++ KPD +AY + +
Sbjct: 149 LGYEPDRVTIGS-----LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 203
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
V + K+ + G+ P Y + GL R +A L ++ K T +
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 263
Query: 335 NALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
+AL+ + V + A F M+ P + T S+L LC ++ DE +++ ++ +
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVS 323
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
D+ SYN +++ C + R+ + + +EM ++GL + YN+L++ + +
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A++ + QM G S ++ TYNIL+ + GE+E AL +F +M ++ + D TYT+++
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443
Query: 514 GLCQETNLQAAFEVFN----KSVNHDVMLARSILSTFMISLCRRVLI 556
G+C+ ++ A+ +F K + D++ +T M LC + L+
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIV----TYTTMMSGLCTKGLL 486
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 95/203 (46%), Gaps = 4/203 (1%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F+ M++ P++ + L + K K D ++ + K + D+ ++N++++
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C ++ A ++ +M + G +PD SL+ CR + + A L D+M G
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF--- 525
++ YN +I + + A F + KG+ P+ TYT+L+ GLC + A
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 526 -EVFNKSVNHDVMLARSILSTFM 547
++ K + +V+ ++L F+
Sbjct: 249 SDMIKKKITPNVITYSALLDAFV 271
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%)
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+L +A + +M + P + +N L+ A + L +M G +L T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
I+I+ F ++ AL + ML+ G PD T SL+ G C+ + A + +K V
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 177/382 (46%), Gaps = 7/382 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L + +A + L + +M +G+ S + I FC KL S + ++ K
Sbjct: 92 NRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMK 151
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+VI +++G C RV EA +++D + KP I + L G V
Sbjct: 152 LGYE--PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKV 209
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ V++ + + G P Y + + + A EL + +D + +
Sbjct: 210 SDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269
Query: 338 IGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
I + S+D +A FN M KG + T + L C + D+ ++ + +
Sbjct: 270 IDGLCKDGSLD--NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ +++V++ G+LREA +++EM ++G+ P+ YNSL++ C+E+ L A
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++ D M + GC ++ T+NILI+ + + I+ L LF M +GV + TY +L++G
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 515 LCQETNLQAAFEVFNKSVNHDV 536
CQ L+ A ++F + V+ V
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRV 469
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 175/375 (46%), Gaps = 5/375 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L +G + +A+ + D M G + + + +G + C K GQ ++ +RK
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMC---KSGQTALAMELLRK 253
Query: 218 RENSMIN-GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E I +V +II G CK ++ AF + +E+ I+ K D I Y + F G
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ +L+ K ++P + I + E ++ EA +L + ++ + N+
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G AI + MI KG P + T + L CK N+ D+ +E+++ +S
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ +YN +V C SG+L A + QEM + + PD+ Y L++ C L A
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL 493
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+++ ++ S ++ Y I+I +++ A LF ++ KGV DA Y ++ L
Sbjct: 494 EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISEL 553
Query: 516 CQETNLQAAFEVFNK 530
C++ +L A +F K
Sbjct: 554 CRKDSLSKADILFRK 568
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 177/390 (45%), Gaps = 15/390 (3%)
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
NEV + GP +L V+ G A+++ +M R ++ + + + I C++
Sbjct: 227 NEVTY-----GP-----VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
L ++ +E+ E +I +I GFC R ++ K+L ++ R+ P+
Sbjct: 277 GSLDNAFNLFNEM---EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ + ++ + F G + E + +LK+ + G+AP T Y I G E R+ EA ++ ++
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
++S D N LI G + + F M +G + T + L + C+ K
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+ ++++ + + D+ SY +++ LC +G L +A + ++++ ++ D+ Y
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
++ C + A L+ + G + + YNI+IS+ + A LF M E+G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
APD TY L+ + + A E+ +
Sbjct: 574 HAPDELTYNILIRAHLGDDDATTAAELIEE 603
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/496 (22%), Positives = 202/496 (40%), Gaps = 53/496 (10%)
Query: 39 HQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSR 98
L RD LS LV + ++ L F + +P + + ++ + +++ ++
Sbjct: 52 RNLSYRDKLSSGLVG------IKADDAVDL-FRDMIQSRP--LPTVIDFNRLFSAIAKTK 102
Query: 99 QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN 158
Q + ++ KQ++ I +I + + AFS ++ + I N
Sbjct: 103 QYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFN 162
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD---EV 215
+LL L + + AL++ D M G + + I + C N K+ + ++D E
Sbjct: 163 TLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVET 222
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ N + G V+ V+ CK + A ++L ++ R K D + Y I+ + G
Sbjct: 223 GFQPNEVTYGPVLNVM-----CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
S+ N + F E+ + G F D N
Sbjct: 278 SL------------------DNAFNLF----------------NEMEIKG-FKADIITYN 302
Query: 336 ALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
LIG + MI++ P + T S L + K K E ++ K +
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ +YN ++ C RL EA ++ M KG DPD+ +N L+ C+ + +
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+L+ +M G N TYN L+ F + G++E A +LF M+ + V PD +Y LL+G
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Query: 515 LCQETNLQAAFEVFNK 530
LC L+ A E+F K
Sbjct: 483 LCDNGELEKALEIFGK 498
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 219/491 (44%), Gaps = 26/491 (5%)
Query: 9 LATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLAL 68
L R+S+A+ K T + TL GL L +V + +L +
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNTLVN-GL------CLNGKVSDAVVLIDRMVET 222
Query: 69 GFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPS 128
GF QPN ++Y +L + S Q +L++++ I LD+ Y II
Sbjct: 223 GF------QPN----EVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 129 LIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFS 188
L + + AF++FNE++ N+L+ + G D+ K+ +M R + +
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 189 TIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKV 248
+ F V I F + KL + +L E+ +R + ++ +I GFCK R+EEA ++
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQR--GIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
+D + + C PD + + I+ + + + + ++ GV T Y + G
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVP-TLS 366
++ AK+L + +VS + D L+ G + + A+ F IEK ++ +
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFG-KIEKSKMELDIG 509
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
+ +C +K D+ +++ L D +YN+M+S LC L +A + ++M
Sbjct: 510 IYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM 569
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
+G PD YN L+ A +D A +L ++M +SG ++ T ++I+ S GE+
Sbjct: 570 TEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS-GEL 628
Query: 487 EGALRLFHNML 497
+ + F +ML
Sbjct: 629 DKS---FLDML 636
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 101/222 (45%), Gaps = 4/222 (1%)
Query: 331 DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
D + + L+G I A+ F MI+ +PT+ + L + K + + ++ + K
Sbjct: 58 DKLSSGLVG----IKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ + + + ++M++ C +L A+ + ++ + G +PD +N+L+ C E
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ A +L D+M G L T N L++ G++ A+ L M+E G P+ TY
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+L +C+ A E+ K ++ L S + LC+
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 210/504 (41%), Gaps = 28/504 (5%)
Query: 61 LTHHSLALGFFNWASQQPNF------------TH--------SPLSYHSILKSLSLSRQI 100
L H LAL F W +QP TH P + ILK LSL
Sbjct: 87 LVHGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARH--ILKELSLMSGK 144
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSL 160
++ + SVY +I ++ Q + +F + + CN++
Sbjct: 145 SSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAI 204
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
L + G + EM R + F + I C + ++ +K E
Sbjct: 205 LGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLM---QKMEK 261
Query: 221 SMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
S +++ ++H +CK R + A ++LD ++ + D Y ++ + + +
Sbjct: 262 SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 321
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
++L+ RK + P Y I G E ++ A +L ++S + + NALI
Sbjct: 322 GYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID 381
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G +S + + A+ F M KG P+ + L LCK + D Y + N
Sbjct: 382 GHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV 441
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+Y M+ LC +G L EA ++ EM + G+DPD+ Y++L+ C+ + AK++
Sbjct: 442 GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 501
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+++ G S N Y+ LI +G ++ A+R++ M+ +G D T+ L+ LC+
Sbjct: 502 CRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKA 561
Query: 519 TNLQAAFEVFNKSVNHDVMLARSI 542
+ A E F + + D +L ++
Sbjct: 562 GKVAEA-EEFMRCMTSDGILPNTV 584
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/478 (22%), Positives = 200/478 (41%), Gaps = 71/478 (14%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ + + ++Y+++L + A +L +K + D Y +I L +
Sbjct: 260 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 319
Query: 136 QKAFSVF----------NEVKFNCED----------IGPEICNSLLAVLAS--------- 166
K + + NEV +N I ++ N +L+ S
Sbjct: 320 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 379
Query: 167 -DGYIDN-----ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
DG+I ALKMF M +G+ S + +GV + C+NA+ L+ +R + N
Sbjct: 380 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFD--LARGFYMRMKRN 437
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
+ G + +I G CK ++EA +L+E+ PD + Y + F +G
Sbjct: 438 GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA 497
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+ ++ + ++G++P G+I I +G +
Sbjct: 498 KEIVCRIYRVGLSPN---------GIIYSTLIYNCCRMGCL------------------- 529
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ AI + MI +G T + L +LCK K E E + ++++ +
Sbjct: 530 ------KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 583
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
S++ +++ SG +A+ V EM + G P Y SL++ C+ LR A+K
Sbjct: 584 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 643
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ A + + YN L++ + G + A+ LF M+++ + PD+ TYTSL+ GLC++
Sbjct: 644 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 701
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 100/197 (50%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M + G PT+ T + + CK+ + +E+ + + D+ +YN+++ LC S R
Sbjct: 259 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 318
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ + Y ++++M+++ + P+ YN+L+ E + A +L ++M + G S N T+N
Sbjct: 319 IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 378
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI G + AL++F+ M KG+ P +Y LL+GLC+ A + + +
Sbjct: 379 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 438
Query: 536 VMLARSILSTFMISLCR 552
V + R + + LC+
Sbjct: 439 VCVGRITYTGMIDGLCK 455
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 112/523 (21%), Positives = 207/523 (39%), Gaps = 62/523 (11%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F S + ++IL S+ S + ++ S LK++ KI D + + +I L + +K+
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 252
Query: 139 FSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+ K P I N++L G A+++ D M +GV+ + + I
Sbjct: 253 SYLMQ--KMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLI 310
Query: 197 WKFCENAKLGQVLSMLDEVRKR--------ENSMING----------------------- 225
C + ++ + +L ++RKR N++ING
Sbjct: 311 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 370
Query: 226 --SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE------EFKLMGSV 277
V +I G +EA K+ + + P ++Y ++ + EF L
Sbjct: 371 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL---- 426
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV----SGKFTIDDDV 333
R ++ KR GV Y I GL C+ L E +V K ID D+
Sbjct: 427 -ARGFYMRMKRN-GVCVGRITYTGMIDGL------CKNGFLDEAVVLLNEMSKDGIDPDI 478
Query: 334 L--NALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
+ +ALI + ++A + G P S L N C+ E + +Y+
Sbjct: 479 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 538
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ + D ++NV+V+ LC +G++ EA ++ M G+ P+ ++ L+
Sbjct: 539 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 598
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
A ++D+M G TY L+ + G + A + ++ A D Y +
Sbjct: 599 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 658
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
LL +C+ NL A +F + V ++ ++ + LCR+
Sbjct: 659 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 701
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 102/544 (18%), Positives = 221/544 (40%), Gaps = 46/544 (8%)
Query: 54 RVINPYLLTHHSLALGFFN-----WASQQPN----FTHSP--LSYHSILKSLSLSRQINA 102
R+I+P +T+++L GF N ASQ N F SP +++++++
Sbjct: 332 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 391
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLA 162
+ ++ +T Y ++ L + A + +K N +G ++
Sbjct: 392 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 451
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG---QVLSMLDEVRKRE 219
L +G++D A+ + +EMS G++ + + I FC+ + +++ + V
Sbjct: 452 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 511
Query: 220 NSMINGSVI----------------AVLIIHG--------------FCKGKRVEEAFKVL 249
N +I ++I +I+ G CK +V EA + +
Sbjct: 512 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 571
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
+ P+ +++ + + G + V + K+G P Y + GL
Sbjct: 572 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 631
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTL 368
+ EA++ + + + +D + N L+ ++ S + A+ F M+++ +P T
Sbjct: 632 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 691
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSA-NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
++L LC++ K+ + K A + + Y V + +G+ + ++M
Sbjct: 692 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 751
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
G PD+ N++++ R + L +M NL TYNIL+ +S+ ++
Sbjct: 752 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 811
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
+ L+ +++ G+ PD T SL+ G+C+ L+ ++ + V + R + +
Sbjct: 812 TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 871
Query: 548 ISLC 551
C
Sbjct: 872 SKCC 875
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 118/556 (21%), Positives = 222/556 (39%), Gaps = 70/556 (12%)
Query: 45 DSLSPSLVAR--VINPYLLTHHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQI 100
D + P+ V+ +IN Y + L F+ + H P +Y S+LK L +
Sbjct: 577 DGILPNTVSFDCLINGY--GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 634
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICN 158
+ LK + +D+ +Y ++ ++ + N KA S+F E+ I P+
Sbjct: 635 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQ--RSILPDSYTYT 692
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRG------VEFSTIGFGVFIWKFCENAKLGQVLSML 212
SL++ L G A+ E RG V ++ G+F K GQ + +
Sbjct: 693 SLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMF--------KAGQWKAGI 744
Query: 213 DEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
+ +N ++ +I G+ + ++E+ +L E+ + P+ Y I+ +
Sbjct: 745 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 804
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL-----------IVERRICEAKEL-- 318
V ++ + G+ P +LG+ I++ IC E+
Sbjct: 805 SKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDR 864
Query: 319 -------------GE---------VIVSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFN 354
GE V+ S ++D D +A++ SV + + R + + +
Sbjct: 865 YTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMV-SVLNRNHRFQESRMVLH 923
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M ++G P L LC+ V + + A+ + + MV L G
Sbjct: 924 EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG 983
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ EA +++ M + L P ++ + +LM CC+ + A +L M G +L +YN
Sbjct: 984 KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1043
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG-LCQETNLQAAFEVFNKSVN 533
+LI+ G++ A L+ M G +ATTY +L+ G L +ET A +
Sbjct: 1044 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKD--- 1100
Query: 534 HDVMLARSILSTFMIS 549
+LAR +++ +S
Sbjct: 1101 ---LLARGFITSMSLS 1113
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 169/398 (42%), Gaps = 37/398 (9%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
C ++ V G + ++F M G + + + +I C+ A + Q +L+E+
Sbjct: 223 CTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMV 282
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKV-LDELRIRECKPDFIAYRIVAEEFKLMG 275
+ + +I+G CK E AF++ L ++ KP+ Y ++ + G
Sbjct: 283 AK--GLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEG 340
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ E++L + + G+AP TN Y I G E G F
Sbjct: 341 KLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKE---------------GSFNC------ 379
Query: 336 ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
A N M +G P + T + L LCK+ K E +V ++ +
Sbjct: 380 -------------AFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQG 426
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D +Y VM++ C G + A + M G PD+ Y +L+ C++ + ++
Sbjct: 427 LQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQ 486
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
KL+D+ A +TY +I+ + +VG+ ALR+F M++ G D+ TY +L+ GL
Sbjct: 487 KLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGL 546
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
C+E+ L+ A ++ ++ ++ T CRR
Sbjct: 547 CKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRR 584
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
VF + G +P + L C+ + +E+ + V+ + D + V+V
Sbjct: 171 VFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVF 230
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C GR R+ + + M G P+V Y + ++ C+ ++ A + ++M A G N+
Sbjct: 231 CQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNV 290
Query: 471 KTYNILISKFSEVGEIEGALRLF------------------------------------H 494
T+ LI+ ++G E A RLF
Sbjct: 291 YTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLG 350
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
M+E+G+AP+ TYT+L+ G C+E + AFE+ NK
Sbjct: 351 RMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNK 386
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 90/235 (38%), Gaps = 50/235 (21%)
Query: 342 SSIDPRSAIVFFNFMIEK-GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD- 399
++ P AIV + + + G L L + L R L+ +Y ++A F D
Sbjct: 54 GALAPDDAIVALSSLADSAGSAAAL----ELFRRLASRQDVRHLMRLY--VTAATTFVDR 107
Query: 400 ------MESYNVMVSFLCTSGRLREAYGVIQEMK---------------RKGLD------ 432
E+ MV+ +GRL EA ++ EM+ R GLD
Sbjct: 108 GSLPMAHEAMRRMVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAY 167
Query: 433 ---------------PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
PD + +L+ CCR+ + L M G + T +++
Sbjct: 168 ARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIV 227
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
F + G LF MLE G P+ YT+ ++GLC+ ++ AF V + V
Sbjct: 228 RVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMV 282
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 205/448 (45%), Gaps = 21/448 (4%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALK 175
D Y +I + ++ KA+S ++E+ I P++ +S++A L +D A++
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLD--RRISPDVVTYSSIIAALCKGQAMDKAME 252
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ M GV + + + + +C + + + + L ++R + + V ++
Sbjct: 253 VLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRS--DGVEPDVVTYNSLMDY 310
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
CK R EA K+ D + R +PD Y + + + G++ E +L + G+ P
Sbjct: 311 LCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPD 370
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRSAIVF 352
+ + I + ++ EA + + + A+IG + S+D A+++
Sbjct: 371 HHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVD--DAMLY 428
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLC---KRNKSDELV--EVYKVLSANDYFTDMESYNVMV 407
F MI++G P + ++L +LC K +K++EL+ + + + N F +N ++
Sbjct: 429 FEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIF-----FNSII 483
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
C GR+ E+ + M R G+ P+V Y++L++ C + A KL MF+ G
Sbjct: 484 HSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMK 543
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
+ TYN LI+ + V ++ AL LF M+ GV+P+ TY +L+GL AA E+
Sbjct: 544 PDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 603
Query: 528 FNKSVNHDVMLARSILSTFMISLCRRVL 555
+ L S + + LC+ L
Sbjct: 604 YVGITKSGTQLELSTYNIILHGLCKNNL 631
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 119/542 (21%), Positives = 233/542 (42%), Gaps = 28/542 (5%)
Query: 4 RPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTH 63
R D+A A +S NR AR + T+H G+ L+
Sbjct: 55 RALADVARHSPAAAVSRYNRM--ARAGAGKVTPTVHTYGI-------LIGCCCRA----- 100
Query: 64 HSLALGFFNWASQ-QPNFTHSPLSYHSILKSLSLS-RQINAIDSVLKQVKVNKITLDSSV 121
L LGF + + F +++ +LK L R +A+D VL+++ D
Sbjct: 101 GRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFS 160
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG----PEICN--SLLAVLASDGYIDNALK 175
++ L +Q+A + + + +D G P++ + +++ +G D A
Sbjct: 161 CTILLKGLCDENRSQEALELLHMMA---DDRGGGSAPDVVSYTTVINGFFKEGDSDKAYS 217
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ EM R + + + I C+ + + + +L + K N ++ + I+HG
Sbjct: 218 TYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVK--NGVMPNCMTYNSILHG 275
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
+C ++ +EA L ++R +PD + Y + + G E + K G+ P
Sbjct: 276 YCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFN 354
Y + G + + E L +++V D V N LI + + + A++ F+
Sbjct: 336 IATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFS 395
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M + G P + T + LCK D+ + ++ + ++ Y ++ LC
Sbjct: 396 KMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFD 455
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ +A +I EM +G+ + F+NS++ + C+E + ++KL+D M G N+ TY+
Sbjct: 456 KWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYS 515
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
LI + G+++ A +L +M G+ PD TY +L+ G C+ + + A +F + V+
Sbjct: 516 TLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS 575
Query: 535 DV 536
V
Sbjct: 576 GV 577
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/486 (20%), Positives = 209/486 (43%), Gaps = 20/486 (4%)
Query: 58 PYLLTHHSLALGFFNWASQQPNFTH---------SP--LSYHSILKSLSLSRQINAIDSV 106
P ++++ ++ GFF ++ SP ++Y SI+ +L + ++ V
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEV 253
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVL 164
L + N + + Y I+ + ++A K + + P++ NSL+ L
Sbjct: 254 LTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLK--KMRSDGVEPDVVTYNSLMDYL 311
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
+G A K+FD M+ RG+E + + + L ++ ++LD + + N +
Sbjct: 312 CKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVR--NGIHP 369
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+ ++I + K ++V+EA V ++R P+ + Y V GSV + +
Sbjct: 370 DHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYF 429
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
++ G+ P Y I L + + +A+EL ++ ++ N++I S
Sbjct: 430 EQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCK- 488
Query: 345 DPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
+ R + F+ M+ G P + T S L C K DE ++ + + D +
Sbjct: 489 EGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVT 548
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN +++ C R+ +A + +EM G+ P++ YN +++ AK+L+ +
Sbjct: 549 YNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGIT 608
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
SG L TYNI++ + + ALR+F N+ + + T+ ++ L +
Sbjct: 609 KSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 668
Query: 523 AAFEVF 528
A ++F
Sbjct: 669 EAKDLF 674
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 168/397 (42%), Gaps = 5/397 (1%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ G +D + +G I F + C + + + ++ R E
Sbjct: 93 LIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLR-RMTE 151
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL---RIRECKPDFIAYRIVAEEFKLMGS 276
S + +++ G C R +EA ++L + R PD ++Y V F G
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ + ++P Y I L + + +A E+ +V + N+
Sbjct: 212 SDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNS 271
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
++ G SS P+ AI F M G P + T ++L LCK +S E +++ ++
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRG 331
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D+ +Y ++ T G L E + ++ M R G+ PD +N L+ A +++ + A
Sbjct: 332 LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAM 391
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
++ +M G + N+ TY +I + G ++ A+ F M+++G+ P+ YTSL+ L
Sbjct: 392 LVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
C A E+ + ++ + L ++ + S C+
Sbjct: 452 CIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCK 488
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 194/435 (44%), Gaps = 10/435 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++L+ + + + ++L + N I D V+ +I + + + +A VF+++
Sbjct: 338 TYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM 397
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ + + P + +++ +L G +D+A+ F++M G+ + I + I C
Sbjct: 398 RQH--GLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFD 455
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
K + ++ E+ R + ++ IIH CK RV E+ K+ D + KP+ I
Sbjct: 456 KWDKAEELILEMLDR--GICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVIT 513
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + + L G + E +L +G+ P Y I G R+ +A L + +V
Sbjct: 514 YSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMV 573
Query: 324 SGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
S + + N ++ G + +A + + + G LST + + LCK N +D
Sbjct: 574 SSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTD 633
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E + +++ L D + ++N+M+ L GR EA + GL P+ Y +
Sbjct: 634 EALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMA 693
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
E + LL +L+ M +GC+ + N ++ + + GEI A + EK +
Sbjct: 694 ENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFS 753
Query: 503 PDATT---YTSLLEG 514
+A+T + LL G
Sbjct: 754 LEASTASLFIDLLSG 768
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/226 (19%), Positives = 93/226 (41%), Gaps = 41/226 (18%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL--SANDYFTDMESYNVMVSFL 410
F+ ++ +GR ++ L+ ++ + + + + ++ A + +Y +++
Sbjct: 38 FDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGCC 97
Query: 411 CTSGRLREAYGVIQEMKRKGLD------------------------------------PD 434
C +GRL + + + +KG PD
Sbjct: 98 CRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPD 157
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMF---ASGCSGNLKTYNILISKFSEVGEIEGALR 491
V L++ C E+ + A +L M G + ++ +Y +I+ F + G+ + A
Sbjct: 158 VFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYS 217
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+H ML++ ++PD TY+S++ LC+ + A EV V + VM
Sbjct: 218 TYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVM 263
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 8/115 (6%)
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL--WDQMFASGC---SGNLKT 472
+A V E+ R+G + N + R PA + +++M +G + + T
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADVARHS---PAAAVSRYNRMARAGAGKVTPTVHT 89
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
Y ILI G ++ N+++KG +A T+T LL+GLC + A ++
Sbjct: 90 YGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 205/448 (45%), Gaps = 21/448 (4%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALK 175
D Y +I + ++ KA+S ++E+ I P++ +S++A L +D A++
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLD--RRISPDVVTYSSIIAALCKGQAMDKAME 252
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ M GV + + + + +C + + + + L ++R + + V ++
Sbjct: 253 VLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMR--SDGVEPDVVTYNSLMDY 310
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
CK R EA K+ D + R +PD Y + + + G++ E +L + G+ P
Sbjct: 311 LCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPD 370
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRSAIVF 352
+ + I + ++ EA + + + A+IG + S+D A+++
Sbjct: 371 HHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVD--DAMLY 428
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLC---KRNKSDELV--EVYKVLSANDYFTDMESYNVMV 407
F MI++G P + ++L +LC K +K++EL+ + + + N F +N ++
Sbjct: 429 FEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIF-----FNSII 483
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
C GR+ E+ + M R G+ P+V Y++L++ C + A KL MF+ G
Sbjct: 484 HSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMK 543
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
+ TYN LI+ + V ++ AL LF M+ GV+P+ TY +L+GL AA E+
Sbjct: 544 PDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 603
Query: 528 FNKSVNHDVMLARSILSTFMISLCRRVL 555
+ L S + + LC+ L
Sbjct: 604 YVGITKSGTQLELSTYNIILHGLCKNNL 631
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 119/542 (21%), Positives = 233/542 (42%), Gaps = 28/542 (5%)
Query: 4 RPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTH 63
R D+A A +S NR AR + T+H G+ L+
Sbjct: 55 RALADVARHSPAAAVSRYNRM--ARAGAGKVTPTVHTYGI-------LIGCCCRA----- 100
Query: 64 HSLALGFFNWASQ-QPNFTHSPLSYHSILKSLSLS-RQINAIDSVLKQVKVNKITLDSSV 121
L LGF + + F +++ +LK L R +A+D VL+++ D
Sbjct: 101 GRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFS 160
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG----PEICN--SLLAVLASDGYIDNALK 175
++ L +Q+A + + + +D G P++ + +++ +G D A
Sbjct: 161 CTILLKGLCDENRSQEALELLHMMA---DDRGGGSAPDVVSYTTVINGFFKEGDSDKAYS 217
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ EM R + + + I C+ + + + +L + K N ++ + I+HG
Sbjct: 218 TYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVK--NGVMPNCMTYNSILHG 275
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
+C ++ +EA L ++R +PD + Y + + G E + K G+ P
Sbjct: 276 YCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFN 354
Y + G + + E L +++V D V N LI + + + A++ F+
Sbjct: 336 IATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFS 395
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M + G P + T + LCK D+ + ++ + ++ Y ++ LC
Sbjct: 396 KMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFD 455
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ +A +I EM +G+ + F+NS++ + C+E + ++KL+D M G N+ TY+
Sbjct: 456 KWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYS 515
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
LI + G+++ A +L +M G+ PD TY +L+ G C+ + + A +F + V+
Sbjct: 516 TLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS 575
Query: 535 DV 536
V
Sbjct: 576 GV 577
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/488 (20%), Positives = 208/488 (42%), Gaps = 24/488 (4%)
Query: 58 PYLLTHHSLALGFFNWASQQPNFTH---------SP--LSYHSILKSLSLSRQINAIDSV 106
P ++++ ++ GFF ++ SP ++Y SI+ +L + ++ V
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEV 253
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVL 164
L + N + + Y I+ + ++A K + + P++ NSL+ L
Sbjct: 254 LTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLK--KMRSDGVEPDVVTYNSLMDYL 311
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
+G A K+FD M+ RG+E + + + L ++ ++LD + + N +
Sbjct: 312 CKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVR--NGIHP 369
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+ ++I + K ++V+EA V ++R P+ + Y V GSV + +
Sbjct: 370 DHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYF 429
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS- 343
++ G+ P Y I L + + +A+EL ++ ++ N++I S
Sbjct: 430 EQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKE 489
Query: 344 ---IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
I+ F+ M+ G P + T S L C K DE ++ + + D
Sbjct: 490 GRVIESEK---LFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDC 546
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+YN +++ C R+ +A + +EM G+ P++ YN +++ AK+L+
Sbjct: 547 VTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVG 606
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
+ SG L TYNI++ + + ALR+F N+ + + T+ ++ L +
Sbjct: 607 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 666
Query: 521 LQAAFEVF 528
A ++F
Sbjct: 667 NDEAKDLF 674
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 168/397 (42%), Gaps = 5/397 (1%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ G +D + +G I F + C + + + ++ R E
Sbjct: 93 LIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLR-RMTE 151
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL---RIRECKPDFIAYRIVAEEFKLMGS 276
S + +++ G C R +EA ++L + R PD ++Y V F G
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ + ++P Y I L + + +A E+ +V + N+
Sbjct: 212 SDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNS 271
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
++ G SS P+ AI F M G P + T ++L LCK +S E +++ ++
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRG 331
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D+ +Y ++ T G L E + ++ M R G+ PD +N L+ A +++ + A
Sbjct: 332 LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAM 391
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
++ +M G + N+ TY +I + G ++ A+ F M+++G+ P+ YTSL+ L
Sbjct: 392 LVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
C A E+ + ++ + L ++ + S C+
Sbjct: 452 CIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCK 488
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 195/429 (45%), Gaps = 7/429 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++L+ + + + ++L + N I D V+ +I + + + +A VF+++
Sbjct: 338 TYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM 397
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ + + P + +++ +L G +D+A+ F++M G+ + I + I C
Sbjct: 398 RQH--GLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFD 455
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
K + ++ E+ R + ++ IIH CK RV E+ K+ D + KP+ I
Sbjct: 456 KWDKAEELILEMLDR--GICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVIT 513
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + + L G + E +L +G+ P Y I G R+ +A L + +V
Sbjct: 514 YSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMV 573
Query: 324 SGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
S + + N ++ G + +A + + + G LST + + LCK N +D
Sbjct: 574 SSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTD 633
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E + +++ L D + ++N+M+ L GR EA + + GL PDV Y+ +
Sbjct: 634 EALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMA 693
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
E + LL L+ M +GC+ N + N ++ K + G+I A + EK +
Sbjct: 694 ENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEKHFS 753
Query: 503 PDATTYTSL 511
+A+T + L
Sbjct: 754 LEASTASLL 762
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 73/177 (41%), Gaps = 39/177 (22%)
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD--------------------------- 432
+ +Y +++ C +GRL + + + +KG
Sbjct: 87 VHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVL 146
Query: 433 ---------PDVSFYNSLMEACCREDLLRPAKKLWDQMF---ASGCSGNLKTYNILISKF 480
PDV L++ C E+ + A +L M G + ++ +Y +I+ F
Sbjct: 147 RRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGF 206
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ G+ + A +H ML++ ++PD TY+S++ LC+ + A EV V + VM
Sbjct: 207 FKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVM 263
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL--WDQMFASGC---SGNLKT 472
+A V +E+ R+G + N + R PA + +++M +G + + T
Sbjct: 33 DARHVFEELLRRGRGASIYGLNRALADVARHS---PAAAVSRYNRMARAGAGKVTPTVHT 89
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
Y ILI G ++ N+++KG +A T+T LL+GLC + A ++
Sbjct: 90 YGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/481 (22%), Positives = 210/481 (43%), Gaps = 26/481 (5%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++++L +I +VL + +Y + + + + A V ++
Sbjct: 113 TYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDL 172
Query: 146 KF-NCE-DIGPEICNSLLAVLASDGYIDNALKMF-DEMSHRGVEFSTIGFGVFIWKFCEN 202
C D+G CN +L + G +D A+++ D + G E + + + C
Sbjct: 173 HGRGCALDVGN--CNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMA 230
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+ G V +++E+ N + LI H C+ E +V ++ C PD
Sbjct: 231 RRWGHVQDLMEEMVA-AGCPPNIVTFSTLIGH-LCRNGLFERVHEVHAQMAEHGCAPDVR 288
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + + +L + G++P Y + GL R EA+ L +
Sbjct: 289 MYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEM 348
Query: 323 VSGKFTIDDDVLNALI------GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+DD N L+ G V + I M+E G +P + T + + C
Sbjct: 349 FDKDCPLDDVTFNILVDFLCQNGLVDRV-----IEVLEQMLEHGCMPDVITYTTVINGFC 403
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K DE V + + ++A + SY +++ LC++ R +A ++ +M ++G P+
Sbjct: 404 KEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPV 463
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
+N+L+ C++ L+ A +L QM +GCS +L +Y+ +I + G + AL L + M
Sbjct: 464 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVM 523
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSILSTFMISLCR 552
++KG++P+ Y+S+ L E + ++F + +V D +L +++S SLC+
Sbjct: 524 VKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVIS----SLCK 579
Query: 553 R 553
R
Sbjct: 580 R 580
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/457 (19%), Positives = 195/457 (42%), Gaps = 42/457 (9%)
Query: 78 PNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
P+F P +SY+++L+ L ++R+ + +++++ + + +I L +
Sbjct: 209 PSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLF 268
Query: 136 QKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
++ V ++ + P++ +++ + + ++ A + + M G+ + + +
Sbjct: 269 ERVHEVHAQMAEH--GCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYN 326
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
+ C + + +L E+ ++ + + V +++ C+ V+ +VL+++
Sbjct: 327 TLLKGLCSADRWEEAEGLLAEMFDKDCPLDD--VTFNILVDFLCQNGLVDRVIEVLEQML 384
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
C PD I Y V F G + E ++L+ G P T Y + GL R
Sbjct: 385 EHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWV 444
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+A+EL + MI++G P T + L
Sbjct: 445 DAEEL----------------------------------MSQMIQQGCPPNPVTFNTLIN 470
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
LCK+ ++ +E+ K + N D+ SY+ ++ L +G EA ++ M +KG+ P
Sbjct: 471 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSP 530
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+ Y+S+ A E + ++++ + + + YN +IS + GE + A+
Sbjct: 531 NTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFL 590
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
M+ G P+ +TYT L+ GL E ++ A E+ +
Sbjct: 591 AYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTE 627
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 171/400 (42%), Gaps = 41/400 (10%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ L + G I +AL + D+M+ RG + + V + C + + +L ++ R
Sbjct: 117 LVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRG 176
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVL-DELRIRECKPDFIAYRIVAEEFKLMGSVF 278
++ G+ L++ C V+EA ++L D L C+PD ++Y V
Sbjct: 177 CALDVGN--CNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAV----------- 223
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
+ GL + RR ++L E +V+ + + LI
Sbjct: 224 ------------------------LRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLI 259
Query: 339 GSV--SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
G + + + R V M E G P + + + +CK + + + + +
Sbjct: 260 GHLCRNGLFERVHEVHAQ-MAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ YN ++ LC++ R EA G++ EM K D +N L++ C+ L+ +
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIE 378
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ +QM GC ++ TY +I+ F + G I+ A+ L +M G P+ +YT +L+GLC
Sbjct: 379 VLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLC 438
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
A E+ ++ + +T + LC++ L+
Sbjct: 439 SAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 478
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 1/155 (0%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y +V LC GR+ +A V+ +M R+G P Y+ +EA CR R A + +
Sbjct: 113 TYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDL 172
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK-GVAPDATTYTSLLEGLCQETN 520
GC+ ++ N+++ + G ++ A+RL ++L G PD +Y ++L GLC
Sbjct: 173 HGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARR 232
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
++ + V ST + LCR L
Sbjct: 233 WGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGL 267
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 88/225 (39%), Gaps = 36/225 (16%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P T L + LC R + + + V ++ Y+V + C + R A GV
Sbjct: 109 PNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGV 168
Query: 423 IQEMKRK------------------------------------GLDPDVSFYNSLMEACC 446
++++ + G +PDV YN+++ C
Sbjct: 169 LRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLC 228
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ L ++M A+GC N+ T++ LI G E + M E G APD
Sbjct: 229 MARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVR 288
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
Y ++++G+C+E L+ A + N+ ++ + +T + LC
Sbjct: 289 MYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLC 333
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/490 (22%), Positives = 211/490 (43%), Gaps = 36/490 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++++ + Q+ A + V V ++ Y I+ SL A +V +E
Sbjct: 77 VAYNAMIAGYCRAGQVAAARRLAAAVPVPP---NAYTYFPIVRSLCARGLIADALTVLDE 133
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ P +C+ +L G +A++ + +G + + + CE
Sbjct: 134 MPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGC 193
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDEL-RIRE------ 256
+ + + +L RK + +++ ++ G C KR ++ +++ E+ R+ E
Sbjct: 194 VDEGVELL---RKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMP 250
Query: 257 ---CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
C PD Y + + G +L + G+ P Y + GL R
Sbjct: 251 EHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWE 310
Query: 314 EAKELGEVIVSGKFTIDDDVLNALI------GSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
EA++L + +DD N L+ G V + I M+E G +P + T
Sbjct: 311 EAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRV-----IELLEQMLEHGCIPDVIT 365
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ + CK DE V + K +SA + SY +++ LC + R +A +I M
Sbjct: 366 YTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMI 425
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
++G P+ +N+L+ C++ L A +L QM +GCS +L +Y+ +I + G+ E
Sbjct: 426 QQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 485
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK----SVNHDVMLARSIL 543
AL L + M+ KG+ P+ Y+S+ L +E ++F+ +V D L +++
Sbjct: 486 EALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVI 545
Query: 544 STFMISLCRR 553
S SLC+R
Sbjct: 546 S----SLCKR 551
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/465 (21%), Positives = 193/465 (41%), Gaps = 83/465 (17%)
Query: 78 PNFTHSP--LSYHSILKSLSLSRQINAIDSV----------LKQVKVNKITLDSSVYRFI 125
P+F P +SY+++LK L ++++ + ++ + L Q+ + T D +Y I
Sbjct: 205 PSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATI 264
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
I + C+D E+ N +L+ M G+
Sbjct: 265 IDGI-------------------CKDGHHEVANDILS----------------RMPSYGL 289
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
+ + + + + C + + +L E+ + + + + V +++ FC+ V+
Sbjct: 290 KPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDD--VTFNILVDFFCQNGLVDRV 347
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
++L+++ C PD I Y V F G V E ++LK G P T Y + G
Sbjct: 348 IELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKG 407
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTL 365
L R +A+EL + MI++G +P
Sbjct: 408 LCRAERWVDAQEL----------------------------------ISHMIQQGCLPNP 433
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
T + L +CK+ +++ +E+ K + N D+ SY+ ++ L +G+ EA ++
Sbjct: 434 VTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 493
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M KG+ P+ Y+S+ A RE +++D + + + YN +IS + E
Sbjct: 494 MINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWE 553
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ A+ F M+ G P+ +TYT L+ GL E ++ A ++ ++
Sbjct: 554 TDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSE 598
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 147/361 (40%), Gaps = 26/361 (7%)
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
+ C + L++LDE+ R + + +I+ C+G A + L L
Sbjct: 114 IVRSLCARGLIADALTVLDEMPLRGCAAT--PPMCHVILEAACRGGGFRSAVRALQVLHA 171
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
+ C D +V G V E +L+K G P Y + GL + +R
Sbjct: 172 KGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRW-- 229
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
DDV ++ V + S M E G P L + +
Sbjct: 230 ----------------DDVEELMVEMVRVHEALSQ------MPEHGCTPDLRMYATIIDG 267
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
+CK + ++ + + ++ YN ++ LC++ R EA ++ EM ++ D
Sbjct: 268 ICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLD 327
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+N L++ C+ L+ +L +QM GC ++ TY +I+ F + G ++ A+ L
Sbjct: 328 DVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLK 387
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRV 554
NM G P+ +YT +L+GLC+ A E+ + + + +T + +C++
Sbjct: 388 NMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKG 447
Query: 555 L 555
L
Sbjct: 448 L 448
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 191/447 (42%), Gaps = 9/447 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+++L S ++ ++ +++ + +I L + Q+A + E+
Sbjct: 239 TYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEM 298
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ P N L+ G + AL +++EM RGV + ++ FC+ K+
Sbjct: 299 AKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKM 358
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
L ++ K+ +++ + +I+GFC+ + EAF +LDELR R + + Y
Sbjct: 359 SDARQQLSDMLKK--NLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYN 416
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKL---GVAPRTNDYREFILGLIVERRICEAKELGEVI 322
+ + +G + E LK K + G+ P Y + G + AKE + +
Sbjct: 417 TLIDGLCRLGDL---ETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEM 473
Query: 323 VSGKFTIDDDVLNA-LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
+ D A ++G + D A M+ KG P + T + LCK
Sbjct: 474 LHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNL 533
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+E E+ + + + + D +Y + +G LRE + +M +G P V Y L
Sbjct: 534 EEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVL 593
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ A L A + +M G N+ TYN+LI+ F +V +++ A + F M EKG+
Sbjct: 594 IHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGI 653
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVF 528
P+ TYT L+ C Q A ++
Sbjct: 654 FPNKYTYTILINENCNMGKWQEALRLY 680
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 125/551 (22%), Positives = 225/551 (40%), Gaps = 81/551 (14%)
Query: 49 PSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLK 108
P L+ RV+ + ++AL FF QP F S ++ +IL+ L + + + V++
Sbjct: 105 PQLLIRVLYS-IREKPTIALRFFKCVLTQPGFKTSEYAFCAILQILVDNCLMKSAYWVME 163
Query: 109 QVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLAS 166
++ + +Y I+ LI G + VF ++ N P++ CN +L +L
Sbjct: 164 RI------ISFEMYG-IVDVLIGGYLNYQCLLVFEKMMRN--RFLPDVKNCNRILKILRD 214
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE------- 219
+ AL+++ M G+ + + + FC+ ++ + L ++ ++++R
Sbjct: 215 KNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVT 274
Query: 220 -NSMING-----------SVIAVL--------------IIHGFCKGKRVEEAFKVLDELR 253
N +ING +I + +I G+CK + EA + +E+
Sbjct: 275 FNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMV 334
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
R P ++ + F G + + L K + P Y I G I
Sbjct: 335 TRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIG 394
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
EA L + + + + N LI + + D +A+ MI +G P + T + L
Sbjct: 395 EAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLV 454
Query: 373 KNLCK-------RNKSDELVEV-------------------------YKV---LSANDYF 397
CK + DE++ V +K+ + +
Sbjct: 455 NGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFP 514
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D+ +YNV V+ LC G L EA ++Q+M R G PD Y S M A LR +++
Sbjct: 515 PDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREI 574
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ M + G + + TY +LI + G ++ A+ F M EKGV P+ TY L+ G C+
Sbjct: 575 FYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCK 634
Query: 518 ETNLQAAFEVF 528
+ A + F
Sbjct: 635 VRKMDQACKFF 645
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 105/204 (51%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ + M E G PT++T + + + CK + +++ + + ++NV+++
Sbjct: 221 ALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLIN 280
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L G L++A G+IQEM + GL YN L+ C++ LL A LW++M G S
Sbjct: 281 GLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSP 340
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ ++N ++ F + G++ A + +ML+K + PD +Y +L+ G C+ N+ AF +
Sbjct: 341 TVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILL 400
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
++ ++ +T + LCR
Sbjct: 401 DELRFRNLSFNIVTYNTLIDGLCR 424
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 174/400 (43%), Gaps = 29/400 (7%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDS 105
+L +V R ++P + +H+++ GF +S +RQ D
Sbjct: 328 ALWEEMVTRGVSPTVASHNTIMYGFCKEG------------------KMSDARQ-QLSDM 368
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLA 165
+ K + + I+ ++ +Y F + N +AF + +E++F N+L+ L
Sbjct: 369 LKKNLMPDIISYNTLIYGF-----CRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLC 423
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMING 225
G ++ ALK+ ++M +RG+ + + V + C+ + DE+ +
Sbjct: 424 RLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQF 483
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
+ A ++ G K +AFK+ +E+ + PD I Y + +G++ E +L+
Sbjct: 484 AYTARIV--GELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQ 541
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID 345
K + G P Y F+ + + E +E+ ++S T LI + +++
Sbjct: 542 KMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHA-HALN 600
Query: 346 PR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
R A+ +F M EKG VP + T + L CK K D+ + + + F + +Y
Sbjct: 601 GRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTY 660
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
++++ C G+ +EA + +M K + PD + +L++
Sbjct: 661 TILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLK 700
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 106/220 (48%), Gaps = 3/220 (1%)
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
+++ LIG + ++ F M+ +P + + + K L +N + +EVY+++
Sbjct: 173 IVDVLIGGYLNY---QCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMG 229
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ +YN M+ C G ++ A ++ +M+ +G P +N L+ ++ L+
Sbjct: 230 EYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQ 289
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
AK L +M +G + TYN LI + + G + AL L+ M+ +GV+P ++ +++
Sbjct: 290 QAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIM 349
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
G C+E + A + + + ++M +T + CR
Sbjct: 350 YGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCR 389
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%)
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
V ++M R PDV N +++ ++LL A +++ M G + TYN ++ F
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
+ GE++ AL L M E+G P T+ L+ GL ++ LQ A + + + ++
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPY 308
Query: 542 ILSTFMISLCRRVLI 556
+ + C++ L+
Sbjct: 309 TYNPLICGYCKKGLL 323
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 194/407 (47%), Gaps = 17/407 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ + D + + +M G+ F + I FC ++ LS+L ++ K
Sbjct: 89 NRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLK 148
Query: 218 ---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+ + GS +++GFC+ RV +A ++D++ KPD +AY + +
Sbjct: 149 LGYEPDRVTIGS-----LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 203
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
V + K+ + G+ P Y + GL R +A L ++ K T +
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 263
Query: 335 NALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
+AL+ + V + A F M+ P + T S+L LC ++ DE +++ ++ +
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 323
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
D+ SYN +++ C + R+ + + +EM ++GL + YN+L++ + +
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A++ + QM G S ++ TYNIL+ + GE+E AL +F +M ++ + D TYT+++
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443
Query: 514 GLCQETNLQAAFEVFN----KSVNHDVMLARSILSTFMISLCRRVLI 556
G+C+ ++ A+ +F K + D++ +T M LC + L+
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIV----TYTTMMSGLCTKGLL 486
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 95/203 (46%), Gaps = 4/203 (1%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F+ M++ P++ + L + K K D ++ + K + D+ ++N++++
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C ++ A ++ +M + G +PD SL+ CR + + A L D+M G
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF--- 525
++ YN +I + + A F + KG+ P+ TYT+L+ GLC + A
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 526 -EVFNKSVNHDVMLARSILSTFM 547
++ K + +V+ ++L F+
Sbjct: 249 SDMIKKKITPNVITYSALLDAFV 271
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%)
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+L +A + +M + P + +N L+ A + L +M G +L T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
I+I+ F ++ AL + ML+ G PD T SL+ G C+ + A + +K V
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 181/400 (45%), Gaps = 11/400 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ +A D + + + M + + + + + I FC ++L L++L ++ K
Sbjct: 84 NKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK 143
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E ++ S + ++G+C KR+ +A ++D++ KPD + + + L
Sbjct: 144 LGYEPDIVTLSSL----LNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHN 199
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E ++ + + G P Y + GL I A L + + GK D + N
Sbjct: 200 KASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 259
Query: 336 ALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
+I + ID A FN M KG P + T ++L LC + + + +
Sbjct: 260 TIIDGLCKYKHID--DAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMI 317
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
++ +++ ++ G+L EA + EM ++ +DPD+ Y+SL+ C D L
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
AK +++ M + C N+ TYN LI F + +E + LF M ++G+ + TY +L+
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+GL Q + A ++F K V+ V S + LC+
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 175/375 (46%), Gaps = 9/375 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L A+ + D+M RG + + +G + C+ + LS+L +K
Sbjct: 189 NTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLL---KK 245
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E I V+ II G CK K +++AF + +++ + +PD Y + G
Sbjct: 246 MEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGR 305
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL-- 334
+ +L + + P + I + E ++ EA++L + ++ K +ID D+
Sbjct: 306 WSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTY 363
Query: 335 NALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
++LI D A F MI K P + T + L K CK + +E +E+++ +S
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ +YN ++ L +G A + ++M G+ PD+ Y+ L++ C+ L
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A +++ + S ++ TYNI+I + G++E LF ++ KGV P+ YT+++
Sbjct: 484 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 543
Query: 514 GLCQETNLQAAFEVF 528
G C++ + A +F
Sbjct: 544 GFCRKGLKEEADALF 558
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 119/505 (23%), Positives = 218/505 (43%), Gaps = 63/505 (12%)
Query: 31 TPLLEQTLHQLGLRDS--LSPSLVARVINPYLLTHHSLALGFF--NWASQ---------- 76
+ LL H + D+ L +V P +T ++L G F N AS+
Sbjct: 154 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQ 213
Query: 77 ---QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
QP+ ++Y +++ L I+ S+LK+++ KI D +Y II L + K
Sbjct: 214 RGCQPDL----VTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK 269
Query: 134 NTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+ AF++FN K + I P++ NSL++ L + G +A ++ M R + + +
Sbjct: 270 HIDDAFALFN--KMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVT 327
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-IIHGFCKGKRVEEAFKVLD 250
F I F + KL + + DE+ KR I+ + +I+GFC R++EA + +
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRS---IDPDIFTYSSLINGFCMHDRLDEAKHMFE 384
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
+ ++C P+ + Y + + F V E + ++ + G+ T Y I GL
Sbjct: 385 LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF--- 441
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
+ G+ ++ K F M+ G P + T S
Sbjct: 442 ------QAGDCDMAQKI-------------------------FKKMVSDGVPPDIITYSI 470
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LCK K ++ + V++ L + D+ +YN+M+ +C +G++ + + + + KG
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+ P+V Y +++ CR+ L A L+ +M G + YN LI G+ +
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASA 590
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGL 515
L M G DA+T + ++ L
Sbjct: 591 ELIKEMRSCGFVGDASTISMVINML 615
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 160/357 (44%), Gaps = 3/357 (0%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
AL + +M G E + + +C + ++ ++++D++ E +V +
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV--EMGYKPDTVTFNTL 191
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
IHG + EA ++D++ R C+PD + Y V G + +LKK K +
Sbjct: 192 IHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKI 251
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIV 351
Y I GL + I +A L + + D N+LI + + S A
Sbjct: 252 EADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASR 311
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
+ MIE+ P + T S L K K E ++Y + D+ +Y+ +++ C
Sbjct: 312 LLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
RL EA + + M K P+V YN+L++ C+ + +L+ +M G GN
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
TYN LI + G+ + A ++F M+ GV PD TY+ LL+GLC+ L+ A VF
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 119/547 (21%), Positives = 224/547 (40%), Gaps = 71/547 (12%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
FT + + +LK L + + +++++ ++ D Y +I L + K ++A
Sbjct: 139 GFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEA 198
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ E++ C +L+ L DG +D A+++ + M +G + + +G I
Sbjct: 199 VGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISG 258
Query: 199 FCENAKLGQVLSMLDEVR------------------------KRENSMINGS-------- 226
FC N L + + DE+ K N+++N
Sbjct: 259 FCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPD 318
Query: 227 -VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
V +I G CK R A +L+ + + +P + Y ++ G V + +L+
Sbjct: 319 VVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILR 378
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSS 343
+ G Y + GL + ++ EA +L + + ++ +V N LIG +
Sbjct: 379 MMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCK 438
Query: 344 IDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
+ A+ M++KG L T + L K K E +E++K + + + +
Sbjct: 439 EGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFT 498
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y++++ C L A G+ EM+ GL+P + YN+LM + C+E L AK L+ +M
Sbjct: 499 YSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMG 558
Query: 463 ASGC-----------SGNLK------------------------TYNILISKFSEVGEIE 487
+ C G LK T++ LI++ S++GE++
Sbjct: 559 NANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELD 618
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
A M+ G PDA Y SLL+GL + + + ++ +L R I+ST +
Sbjct: 619 EAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTIL 678
Query: 548 ISLCRRV 554
LC +
Sbjct: 679 TCLCHSI 685
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 182/413 (44%), Gaps = 13/413 (3%)
Query: 128 SLIQGKNTQ--KAFSVFNE-VKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSH 182
SL Q N+Q +A S+F+ + FN + P CN L+ LA A ++ M+H
Sbjct: 46 SLCQKPNSQFTEAVSLFHSALDFN---LLPSWATCNFLVDALARSRNYGLAFSVYRRMTH 102
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRV 242
V S I F + K ++ V KR ++ I +++ G C+ V
Sbjct: 103 VDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTV--NVFIMNIVLKGLCRNGGV 160
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
EA ++ E+ + PD ++Y + + E +L + G P +
Sbjct: 161 FEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTL 220
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGR 361
+ GL + R+ EA EL E + F D + LI G ++ + F+ M+ KG
Sbjct: 221 MDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGI 280
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
+ T S L LC+ + E V ++ + D+ +Y ++ LC GR A
Sbjct: 281 SANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMD 340
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
++ M KG +P YN L+ C+E L+ A K+ M G ++ TYN L+
Sbjct: 341 LLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLC 400
Query: 482 EVGEIEGALRLFHNML--EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
+ G+++ AL+LF++M E + P+ T+ L+ GLC+E L A ++ K V
Sbjct: 401 DKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMV 453
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 114/235 (48%), Gaps = 9/235 (3%)
Query: 327 FTIDDDVLNALIGSVSSIDPRSAIVF--FNFMIEKGR---VPTLSTLSNLSKNLCKRNKS 381
FT++ ++N ++ + R+ VF + E GR P + + + L LCK K
Sbjct: 140 FTVNVFIMNIVLKGLC----RNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKL 195
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
E V + + A F + + ++ LC GR+ EA +++ MK+KG D DV Y +L
Sbjct: 196 KEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTL 255
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ C L K+L+D+M G S N+ TY+ L+ +G+ + A + + M E G+
Sbjct: 256 ISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGI 315
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
PD TYT L++GLC++ A ++ N V + + + LC+ L+
Sbjct: 316 HPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLV 370
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%)
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
P+ ++++G + ++ + K LC+ E + + + + D+ SYN
Sbjct: 125 PQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNT 184
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+++ LC + +L+EA G++ EM+ G P+ +LM+ C++ + A +L + M G
Sbjct: 185 LINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKG 244
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
++ Y LIS F G ++ LF ML KG++ + TY+ L+ GLC+ + A
Sbjct: 245 FDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEAN 304
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCR 552
V N H + + + LC+
Sbjct: 305 TVLNAMAEHGIHPDVVTYTGLIDGLCK 331
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 96/202 (47%), Gaps = 4/202 (1%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F+ ++ +P+ +T + L L + VY+ ++ D S + ++
Sbjct: 58 AVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIE 117
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
+ + + +GV+ + ++G +V N +++ CR + A L +M S
Sbjct: 118 CFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSP 177
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ +YN LI+ + +++ A+ L M G P++ T T+L++GLC++ + A E+
Sbjct: 178 DIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELL 237
Query: 529 ----NKSVNHDVMLARSILSTF 546
K + DV+L +++S F
Sbjct: 238 EAMKKKGFDADVVLYGTLISGF 259
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 119/563 (21%), Positives = 246/563 (43%), Gaps = 59/563 (10%)
Query: 30 WTPLLEQTLHQLGLRDSLS-PSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
W P +E+ L+ D +S P ++ V+ L ++A +F W ++ H P Y+
Sbjct: 83 WGPDVEEALNVF---DEMSQPEVIVGVMKR--LKDVNVAFQYFRWVERKTQQAHCPEVYN 137
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN---EV 145
+ L ++ +R ++ ++ +L+++ V L + V ++ S ++ ++AF V +
Sbjct: 138 AFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKF 197
Query: 146 KF----------------------------NCEDIGPE----ICNSLLAVLASDGYIDNA 173
KF ++IG E + +L+ V A +G ID A
Sbjct: 198 KFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAA 257
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLII 233
L + DEM + + V I F + K+ E++ + ++ V +I
Sbjct: 258 LSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQ--GLVPDDVTYTTLI 315
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
CK +R++EA ++ +EL + P AY + + G E +L+++++ G
Sbjct: 316 GVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCI 375
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVI---VSGKFTIDDDVLNALIGSVSSIDPRSAI 350
P Y + L + ++ EA + + + + T + +++ L + + +A+
Sbjct: 376 PSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTYNILIDML---CKAGELEAAL 432
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ M E G P + T++ + LCK K DE ++ L D ++ ++ L
Sbjct: 433 KVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGL 492
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME---ACCREDLLRPAKKLWDQMFASGCS 467
GR+ +AY + ++M P+V Y SL++ C R++ K++ +M GCS
Sbjct: 493 GRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKE---DGHKIYKEMVHRGCS 549
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
+L N + + GE+E LF + +G+ PD +Y+ L+ GL + + +++
Sbjct: 550 PDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKL 609
Query: 528 F----NKSVNHDVMLARSILSTF 546
F + ++ DV+ +++ F
Sbjct: 610 FYEMKEQGLHLDVLAYNTVIDGF 632
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/471 (21%), Positives = 206/471 (43%), Gaps = 9/471 (1%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
+A FF+ Q ++Y +++ L +R+++ + +++ +N+ Y +
Sbjct: 291 MAWKFFHEMKAQ-GLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTM 349
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHR 183
I +A+S+ K + P + N +L L G ++ AL++ DEM
Sbjct: 350 IMGYGSAGKFDEAYSLLERQKR--KGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQD 407
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
T + + I C+ +L L + D ++ E + + ++I CK ++++
Sbjct: 408 AAPNLTT-YNILIDMLCKAGELEAALKVQDTMK--EAGLFPNIMTVNIMIDRLCKAQKLD 464
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
EA + L + C PD + + + G V + + +K P Y I
Sbjct: 465 EACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLI 524
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRV 362
R + ++ + +V + D +LN+ + V + + F + +G V
Sbjct: 525 QNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLV 584
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + + S L L K S E +++ + D+ +YN ++ C SG++ +AY +
Sbjct: 585 PDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQL 644
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
++EMK KGL P V Y S+++ + D L A L+++ + G N+ Y+ LI F +
Sbjct: 645 LEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGK 704
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
VG I+ A + +++KG+ P++ T+ LL+ L + + A F N
Sbjct: 705 VGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKN 755
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 102/481 (21%), Positives = 206/481 (42%), Gaps = 39/481 (8%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y++++ + + + S+L++ K Y I+ L + ++A + +E+
Sbjct: 345 AYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM 404
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ +D P + N L+ +L G ++ ALK+ D M G+ + + + I + C+
Sbjct: 405 R---QDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQ 461
Query: 204 KLGQVLS-------------------MLDEVRKR--------------ENSMINGSVIAV 230
KL + S ++D + +R ++ I V+
Sbjct: 462 KLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYT 521
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I F K R E+ K+ E+ R C PD + + G V + + ++ +
Sbjct: 522 SLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQ 581
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G+ P Y I GL+ E +L + +D N +I G S A
Sbjct: 582 GLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKA 641
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
M KG PT+ T ++ L K ++ DE +++ + ++ Y+ ++
Sbjct: 642 YQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDG 701
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
GR+ EAY +++E+ +KGL P+ +N L++A + + + A+ + M CS N
Sbjct: 702 FGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPN 761
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
TY+I+I+ + + A + M ++G+ P+ TYT+++ GL + N+ A +F+
Sbjct: 762 AMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFD 821
Query: 530 K 530
+
Sbjct: 822 R 822
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 182/410 (44%), Gaps = 7/410 (1%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMF 177
DS + +I L + A+S++ ++ + + + SL+ G ++ K++
Sbjct: 481 DSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIY 540
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFC 237
EM HRG + ++ + ++ + ++ +E++ + ++ ++IHG
Sbjct: 541 KEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQ--GLVPDVRSYSILIHGLV 598
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K E +K+ E++ + D +AY V + F G V + +L++ + G+ P
Sbjct: 599 KAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVV 658
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---GSVSSIDPRSAIVFFN 354
Y + GL R+ EA L E S ++ + ++LI G V ID A +
Sbjct: 659 TYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRID--EAYLILE 716
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
+++KG P T + L L K + DE ++ + + +Y++M++ LC
Sbjct: 717 ELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIR 776
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ +A+ QEM+++GL P+ Y +++ + + A+ L+D+ ASG + YN
Sbjct: 777 KFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYN 836
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
+I S + A +F KG ++ T LL+ L + L+ A
Sbjct: 837 AMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQA 886
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 126/564 (22%), Positives = 244/564 (43%), Gaps = 53/564 (9%)
Query: 30 WTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHS 89
W +E L +L L + P LV V+ L + A+ +F WA + + H +Y+S
Sbjct: 80 WGSSVENRLAELDLNPN--PELVIGVLRR--LKDVNNAVNYFRWAERLTDRAHCREAYNS 135
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS---VFNEVK 146
+L ++ +R+ N ++ +L+++ + ++ I+ S I+ + ++AF+ ++K
Sbjct: 136 LLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLK 195
Query: 147 F--------------------NC--------EDIG----PEICNSLLAVLASDGYIDNAL 174
F +C +++G + +L+ V A +G +D AL
Sbjct: 196 FRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAAL 255
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIH 234
+ DEM +E + + V I F + K+ E++ N ++ V +I
Sbjct: 256 SLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKA--NGLVLDDVTYTSMIG 313
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
CK R+ EA ++ + + + P AY + + + G + +L+++R+ G P
Sbjct: 314 VLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIP 373
Query: 295 RTNDYREFILGLIVERRICEA-KELGEVIVSGKFTIDD-DVLNALIGSVSSIDP-RSAIV 351
Y + L + ++ EA K+ E+ K I + N +I + +A+V
Sbjct: 374 SVVSYNCILSCLGRKGQVDEALKKFEEM---KKDAIPNLSTYNIMIDMLCKAGKLETALV 430
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
+ M + G P + T++ + LCK + D+ +++ L D +Y ++ L
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLG 490
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLME---ACCREDLLRPAKKLWDQMFASGCSG 468
GR+ EAY + ++M P+ Y SL+ C R++ K++++M GCS
Sbjct: 491 RHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKE---DGHKIYNEMLRLGCSP 547
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+L N + + GEIE LF + G PDA +YT L+ GL + A+E+F
Sbjct: 548 DLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELF 607
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
+L +T + C+
Sbjct: 608 YTMKEQGCVLDTRAYNTVIDGFCK 631
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 201/453 (44%), Gaps = 20/453 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y S++ L + ++N + + + NK + Y +I + A+S+
Sbjct: 306 VTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLER 365
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGV-EFSTIGFGVFIWKFCE 201
+ + P + N +L+ L G +D ALK F+EM + ST + + I C+
Sbjct: 366 QRR--KGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLST--YNIMIDMLCK 421
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
KL L + D ++ ++ + +VI V +++ CK +R+++A + + L + C+PD
Sbjct: 422 AGKLETALVVRDAMK---DAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPD 478
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ Y + E G V E + ++ P Y I C KE G
Sbjct: 479 AVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFK----CGRKEDGH 534
Query: 321 VIVSGKFTI----DDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
I + + D +LN + V + + F + G +P + + L L
Sbjct: 535 KIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGL 594
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
K + E E++ + D +YN ++ C SG++ +AY +++EMK KG +P V
Sbjct: 595 VKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTV 654
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y S+++ + D L A L+++ + G N+ Y+ LI F +VG I+ A +
Sbjct: 655 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEE 714
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+++KG+ P+ T+ LL+ L + + A F
Sbjct: 715 LMQKGLTPNVYTWNCLLDALVKAEEISEALVCF 747
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 200/453 (44%), Gaps = 12/453 (2%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S +SY+ IL L Q++ +++K + I + S Y +I L + + A V
Sbjct: 374 SVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALVVR 432
Query: 143 NEVKFNCEDIG--PEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ +K D G P + N ++ L +D+A +F+ + H+ + + I
Sbjct: 433 DAMK----DAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEG 488
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
+ ++ + + +++ + + I +V+ +I F K R E+ K+ +E+ C
Sbjct: 489 LGRHGRVDEAYKLYEQML--DANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCS 546
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD + + G + + + ++ + LG P Y I GL+ EA EL
Sbjct: 547 PDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYEL 606
Query: 319 GEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ +D N +I G S A M KG PT+ T ++ L K
Sbjct: 607 FYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAK 666
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
++ DE +++ + ++ Y+ ++ GR+ EAY +++E+ +KGL P+V
Sbjct: 667 IDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 726
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
+N L++A + + + A + M C+ N TY+ILI ++ + A + M
Sbjct: 727 WNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQ 786
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
++G P+ TYT+++ GL + N+ A +F K
Sbjct: 787 KQGFKPNVFTYTTMISGLAKAGNIVEADTLFEK 819
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 100/473 (21%), Positives = 203/473 (42%), Gaps = 24/473 (5%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
+ ++++ + +++A S+L ++K N + D +Y I + A+ F+E+K
Sbjct: 238 FTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMK 297
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
N + S++ VL ++ A+++F+ M + I + K
Sbjct: 298 ANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFE 357
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
S+L+ R+R I V I+ + +V+EA K +E++ ++ P+ Y I
Sbjct: 358 DAYSLLE--RQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK-KDAIPNLSTYNI 414
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV--IVS 324
+ + G + VV + G+ P + ++V+R +C+A+ L + I
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAGLFPNV-----ITVNIMVDR-LCKAQRLDDACSIFE 468
Query: 325 G---KFTIDDDV----LNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
G K D V L +G +D A + M++ ++P ++L +N K
Sbjct: 469 GLDHKTCRPDAVTYCSLIEGLGRHGRVD--EAYKLYEQMLDANQIPNAVVYTSLIRNFFK 526
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ ++ ++Y + D+ N + + +G + + + QE+K G PD
Sbjct: 527 CGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARS 586
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
Y L+ + A +L+ M GC + + YN +I F + G++ A +L M
Sbjct: 587 YTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMK 646
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSILSTF 546
KG P TY S+++GL + L A+ +F +K + +V++ S++ F
Sbjct: 647 TKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGF 699
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 182/410 (44%), Gaps = 11/410 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQ-VKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
++Y S+++ L +++ + +Q + N+I ++ VY +I + + + ++N
Sbjct: 480 VTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIP-NAVVYTSLIRNFFKCGRKEDGHKIYN 538
Query: 144 E-VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E ++ C P++ N+ + + G I+ +F E+ + G + + I
Sbjct: 539 EMLRLGCS---PDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLV 595
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + + ++ E + + +I GFCK +V +A+++L+E++ + +P
Sbjct: 596 KAGFAHEAYELFYTMK--EQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPT 653
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ Y V + + + E ++ ++ + G+ Y I G RI EA + E
Sbjct: 654 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIME 713
Query: 321 VIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
++ T + N L+ + V + + A+V F M + P T S L LCK
Sbjct: 714 ELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIR 773
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K ++ ++ + + ++ +Y M+S L +G + EA + ++ K KG D + YN
Sbjct: 774 KFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYN 833
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
+++E + A +L+++ GCS KT +L+ + IE A
Sbjct: 834 AIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 130/298 (43%), Gaps = 5/298 (1%)
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
++IHG K EA+++ ++ + C D AY V + F G V + +L++ +
Sbjct: 588 TILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKT 647
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---GSVSSIDP 346
G P Y I GL R+ EA L E S ++ + ++LI G V ID
Sbjct: 648 KGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRID- 706
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A + +++KG P + T + L L K + E + ++ + + +Y+++
Sbjct: 707 -EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSIL 765
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC + +A+ QEM+++G P+V Y +++ + + A L+++ G
Sbjct: 766 IHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGG 825
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
+ YN +I S A RLF KG + T LL+ L + ++ A
Sbjct: 826 VADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 200/457 (43%), Gaps = 37/457 (8%)
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLA 162
+DS LK+ + ++ ++ L++ TQ + N+V +N +++
Sbjct: 250 LDSFLKEGRKDEASM-----------LLKEMETQGGGCLLNDVTYNV----------VIS 288
Query: 163 VLASDGYIDNALKMFDEM--SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
LA +G+++NA K+ D M S + F+ + I E + +V ++ E+ EN
Sbjct: 289 FLAREGHLENAAKLVDSMRLSKKASSFT---YNPLITALLERGFVQKVEALQMEM---EN 342
Query: 221 SMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
I +++ IIHG K ++VE A E+R PD I Y + + G++ E
Sbjct: 343 EGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKE 402
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
+L R+ G+AP Y I G + EA+ L E +V D L+
Sbjct: 403 ALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMN 462
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR---NKSDELVEVYKVLSAND 395
GS + A FF+ M+ KG P + +C + + ++ +V+
Sbjct: 463 GSHKVRNLPMAREFFDEMLSKGLQPDCFAYNT---RICAELILGDTHKAFQLREVMMLKG 519
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ D +YNV++ LC +G L++A + +M GL PD Y L+ A C LL A+
Sbjct: 520 IYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEAR 579
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
KL + M + G ++ TY ILI G + A F ML+ G+ P+ TY L+ L
Sbjct: 580 KLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHAL 639
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
C+ A+ F++ + + + + + CR
Sbjct: 640 CRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCR 676
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 193/436 (44%), Gaps = 12/436 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+ ++ L+ + ++ ++++K S Y +I +L++ QK ++ +
Sbjct: 281 VTYNVVISFLAREGHLENAAKLVDSMRLSK-KASSFTYNPLITALLERGFVQKVEAL--Q 337
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ E I P + N+++ L ++ A F EM G+ I + + +C+
Sbjct: 338 MEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKA 397
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
L + L +L ++R+ + + +V+ +I G+C+ +EEA ++ +E+ + C PD
Sbjct: 398 GNLKEALWLLGDLRR---AGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDV 454
Query: 262 IAYRIVAE-EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
Y I+ K+ RE + K G+ P Y I ++ +A +L E
Sbjct: 455 CTYTILMNGSHKVRNLPMAREFFDEMLSK-GLQPDCFAYNTRICAELILGDTHKAFQLRE 513
Query: 321 VIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
V++ D N +I G + + + A M+ G P T + L C+R
Sbjct: 514 VMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERG 573
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
E ++ + ++ + +Y +++ C G L AYG ++M G++P+ YN
Sbjct: 574 LLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYN 633
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
L+ A CR A + +M G + N TY +LI G A+RL+ M +
Sbjct: 634 VLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQN 693
Query: 500 GVAPDATTYTSLLEGL 515
G+ PD T+ +L +G
Sbjct: 694 GIPPDYCTHNALFKGF 709
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 174/412 (42%), Gaps = 12/412 (2%)
Query: 149 CEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
C + P++ CN +L VL D+ ++ EM +E + + + + F + +
Sbjct: 201 CHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKD 260
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ +L E+ + + V ++I + +E A K++D +R+ + K Y
Sbjct: 261 EASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSK-KASSFTYNP 319
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ G V + E + + G+ P Y I GL+ ++ EA +L +
Sbjct: 320 LITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQV-EAAQLKFAEMRAM 378
Query: 327 FTIDDDV-LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ D + N+++ G + + + A+ + G PT+ T + L C+ +E
Sbjct: 379 GLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEA 438
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+ + + F D+ +Y ++++ L A EM KGL PD YN+ +
Sbjct: 439 RRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRI-- 496
Query: 445 CCREDLL---RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
C E +L A +L + M G + TYN++I + G ++ A L M+ G+
Sbjct: 497 -CAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGL 555
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
PD TYT L+ C+ L A ++ N V+ + + + + + CRR
Sbjct: 556 QPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRR 607
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 186/438 (42%), Gaps = 48/438 (10%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S +Y+ ++ +L + ++++ +++ I Y II L++ + + A F
Sbjct: 313 SSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKF 372
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E++ + P++ NS+L G + AL + ++ G+ + + + I +C
Sbjct: 373 AEMR--AMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYC 430
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIA-----VLIIHGFCKGKRVEEAFKVLDELRIR 255
L L+E R+ + M+ ++++G K + + A + DE+ +
Sbjct: 431 R-------LGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSK 483
Query: 256 ECKPDFIAY--RIVAEEFKLMGSVFE----REVVLKKKRKLGVAPRTNDYREFILGLIVE 309
+PD AY RI AE ++G + REV++ K G+ P T Y I GL
Sbjct: 484 GLQPDCFAYNTRICAE--LILGDTHKAFQLREVMMLK----GIYPDTVTYNVIIDGLCKT 537
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTL 368
+ +AK+L +VS D LI + S A N M+ G P++ T
Sbjct: 538 GNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTY 597
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDME---------SYNVMVSFLCTSGRLREA 419
+ L C+R + SA +F M +YNV++ LC +GR A
Sbjct: 598 TILIHTCCRRGN---------LYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLA 648
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
Y EM +GL P+ Y L++ CRE A +L+ +M +G + T+N L
Sbjct: 649 YHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKG 708
Query: 480 FSEVGEIEGALRLFHNML 497
F + G + A+ N++
Sbjct: 709 FDK-GHMYHAIEYLENIV 725
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 75/176 (42%), Gaps = 36/176 (20%)
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+ ++V++ + D+ N ++ L + R + V +EM + ++P + YN+L+++
Sbjct: 193 LAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDS 252
Query: 445 CCREDLLRPAKKLWDQM--FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM------ 496
+E A L +M GC N TYN++IS + G +E A +L +M
Sbjct: 253 FLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKA 312
Query: 497 ------------LEK----------------GVAPDATTYTSLLEGLCQETNLQAA 524
LE+ G+ P TY +++ GL + ++AA
Sbjct: 313 SSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAA 368
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 117/558 (20%), Positives = 235/558 (42%), Gaps = 40/558 (7%)
Query: 33 LLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILK 92
L+ ++ Q SPSL INP LTH + + A + + LS+ + +
Sbjct: 73 LVCESYQQTSFSKPSSPSLNLE-INPNSLTHEQVITVVASLAQEAGSVV--SLSFFNWVI 129
Query: 93 SLSLSRQINAIDSVLKQVKVNKITLD--SSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCE 150
S R + V +N LD + V + ++ S + ++A ++ E++ +
Sbjct: 130 GFSKFRHFMRLYIVCATTFLNNDNLDRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGL 189
Query: 151 DIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS 210
+ I N ++ V + G++D A K+FDEM R V + + + + +C ++ V
Sbjct: 190 VLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDR 249
Query: 211 MLDEVRKRENSMINGSVIAVL---------------------------------IIHGFC 237
L ++ +R ++ N + ++ +I+G C
Sbjct: 250 WLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLC 309
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER-EVVLKKKRKLGVAPRT 296
K +++AF++L+E+ + KP+ + + + G + + LK R P
Sbjct: 310 KIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNV 369
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNF 355
Y I G E ++ A+ L + + + LI G + + A +
Sbjct: 370 YTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDL 429
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M ++G P + T + + LCK+ + E ++ + + D +Y +++S C
Sbjct: 430 MGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTD 489
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
++A + M + GL PD+ YN L+ CR+ + ++KL+++ G +TY
Sbjct: 490 NKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTS 549
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
+I + G I A++ FH M + G PD+ TY +L+ GLC E+ L A +++ +++
Sbjct: 550 MICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNG 609
Query: 536 VMLARSILSTFMISLCRR 553
+ T C++
Sbjct: 610 LSPCEVTRVTLAYEYCKQ 627
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 161/377 (42%), Gaps = 6/377 (1%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE-V 215
C +++ + G+++ A F + G+ + I F I C+ + Q ML+E V
Sbjct: 266 CTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMV 325
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RIRECKPDFIAYRIVAEEFKLM 274
RK + +I G CK E+AF++ +L R KP+ Y + +
Sbjct: 326 RKGWKPNV---YTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKE 382
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
+ E++L + ++ G+ P TN Y I G A EL +++ FT +
Sbjct: 383 EKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTY 442
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
NA+I G A ++ G T + L C++ + + + ++ +
Sbjct: 443 NAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFK 502
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
DM +YNV+++ C ++ E+ + +E GL P Y S++ CR+ +
Sbjct: 503 VGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISS 562
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A K + +M GC + TY LIS +++ A +L+ M++ G++P T +L
Sbjct: 563 AIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAY 622
Query: 514 GLCQETNLQAAFEVFNK 530
C++ + A + +
Sbjct: 623 EYCKQGDSATAMIILER 639
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 120/549 (21%), Positives = 222/549 (40%), Gaps = 26/549 (4%)
Query: 8 DLATRISQAII-SASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSL 66
D AT + Q ++ S S + ++E H L L+ AR++N + +L
Sbjct: 155 DRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLK--------ARILN--FVIDVAL 204
Query: 67 ALGFFNWASQ------QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS 120
ALGF ++A + SY ++ +I+ +D LK + +D++
Sbjct: 205 ALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNA 264
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFD 178
+I + + +AF F K+ + P + N SL+ L G I A +M +
Sbjct: 265 TCTLMISTFSEKGFVNRAFWYFK--KWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLE 322
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
EM +G + + I C+ + + ++ + +N N +I +G+CK
Sbjct: 323 EMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMI-NGYCK 381
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+++ A +L ++ + P+ Y + + G+ ++ K G P
Sbjct: 382 EEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFT 441
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMI 357
Y I GL + R EA +L + D LI D + A+ F+ M
Sbjct: 442 YNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMF 501
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+ G P + T + L C++ K +E ++++ E+Y M+ C G +
Sbjct: 502 KVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHIS 561
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
A +M+ G PD Y +L+ C E L A +L++ M +G S T L
Sbjct: 562 SAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLA 621
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
++ + G+ A+ + LEK + T +L+ LC E + A F+K ++ D+
Sbjct: 622 YEYCKQGDSATAMIILER-LEKKLW--IRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLN 678
Query: 538 LARSILSTF 546
+ R L+ F
Sbjct: 679 VDRITLAAF 687
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/487 (22%), Positives = 214/487 (43%), Gaps = 25/487 (5%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR-- 123
L L FF W+ ++ ++ +L L+ S++ + + S L N+ SSV+
Sbjct: 60 LVLRFFKWSQKEYRLSYGLEPTSKVLHFLANSKRYSKVRSFLDSFVKNEKHTVSSVFHSL 119
Query: 124 ---------------FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDG 168
++ + ++ A+ F K + CN LL+ L +
Sbjct: 120 LLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKEN 179
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVI 228
I + ++ EM R + + F +FI C KL + +++++ I+ +V+
Sbjct: 180 KIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWG---ISPNVV 236
Query: 229 AV-LIIHGFCKGKRVEEAFKV---LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
++ G+CK + +K + E+ + P+ + + + + F +V +
Sbjct: 237 TYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAF 296
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSS 343
++ +K G+ P Y I GL ++ EA +L + +V + NALI G
Sbjct: 297 EEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKK 356
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ A F+ + ++ VP + T + + CK +E + + ++ +Y
Sbjct: 357 KMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTY 416
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N +++ LC L+ A ++ EM+ KGL DV YN L++ C+ D R A+KL ++MF
Sbjct: 417 NCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFN 476
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G N TYN L+ + G+++ AL + M ++ P+ TY L++G C+ L+A
Sbjct: 477 LGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEA 536
Query: 524 AFEVFNK 530
A + N+
Sbjct: 537 ANGLLNE 543
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 185/430 (43%), Gaps = 62/430 (14%)
Query: 82 HSPLSYHSI-LKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
H+ L+ +I + L + ++N + ++ +K I+ + Y ++ + + K
Sbjct: 197 HTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGK--- 253
Query: 141 VFNEVKFNCEDIGPEIC------NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
++ F E + +IC N+L+ D + A K F+EM +G++ + + +
Sbjct: 254 MYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNS 313
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
I C N KL + + + D++ + V +I+GFCK K ++EA KV D++
Sbjct: 314 LINGLCNNGKLEEAIDLWDKMVGL--GLKPNIVTYNALINGFCKKKMMKEATKVFDDVSK 371
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
+E P+ I + + + + G + E + G+ P + Y I GL ++ +
Sbjct: 372 QELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQA 431
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
AKEL + + + + +V +N +I+ L KN
Sbjct: 432 AKEL-------------------LNEMENKGLKGDVVTYNILID-----------GLCKN 461
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
RN L E++ + ++ T YN ++ C G+L+ A V M+++ P+
Sbjct: 462 DKSRNAEKLLNEMFNLGLKPNHVT----YNTLMDGYCMEGKLKAALNVRTRMEKERKQPN 517
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V YN L++ C+ + L A L ++M G + N TY+I +RL
Sbjct: 518 VVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDI--------------VRL-- 561
Query: 495 NMLEKGVAPD 504
MLEKG +PD
Sbjct: 562 EMLEKGFSPD 571
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 132/278 (47%), Gaps = 8/278 (2%)
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-- 338
E V K+ K + N + FI GL ++ +A++ E + + + + N L+
Sbjct: 185 EYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDG 244
Query: 339 ----GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
GS + A F M+ P T + L CK + ++ +
Sbjct: 245 YCKRGSAGKM--YKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQ 302
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ +YN +++ LC +G+L EA + +M GL P++ YN+L+ C++ +++ A
Sbjct: 303 GLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEA 362
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K++D + N+ T+N +I + + G +E L +ML++G+ P+ +TY L+ G
Sbjct: 363 TKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAG 422
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
LC++ +LQAA E+ N+ N + + + LC+
Sbjct: 423 LCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCK 460
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 99/197 (50%), Gaps = 3/197 (1%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEV---YKVLSANDYFTDMESYNVMVSFLCTSGRL 416
G P + T + L CKR + ++ + K + AN + ++N ++ C +
Sbjct: 230 GISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENV 289
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
A +EM+++GL P++ YNSL+ C L A LWD+M G N+ TYN L
Sbjct: 290 AAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNAL 349
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I+ F + ++ A ++F ++ ++ + P+ T+ ++++ C+E ++ F + + ++ +
Sbjct: 350 INGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGI 409
Query: 537 MLARSILSTFMISLCRR 553
+ S + + LCR+
Sbjct: 410 LPNVSTYNCLIAGLCRK 426
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 200/471 (42%), Gaps = 27/471 (5%)
Query: 64 HSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQIN---AIDSVLKQVKVNKITLDSS 120
H F+ P + S + ++ IL SL S N AI S+ ++++N IT
Sbjct: 28 HDAISSFYRMLRMNP--SPSIIEFNKILGSLVKSNNNNYPIAI-SLYHRLQLNAITPSIV 84
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
+ +I AFSV ++ +L+ L +G + AL D +
Sbjct: 85 TFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHV 144
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKG 239
RG + + +G+ I C K+G+ + L +RK + ++N +V+ II CK
Sbjct: 145 IARGFRLNEVSYGILINGLC---KMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKE 201
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
K V EA+++ ++ +++ PD + + + F ++G E + + + P +
Sbjct: 202 KLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTF 261
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
+ L E E K +VL ++ V+ ++ + FN + ++
Sbjct: 262 NILVDALCKEGSTKETK---------------NVLAVMMKEVNQVNKAKHV--FNIIGKR 304
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
P + + + + K LCK DE + ++ + D +Y+ ++ LC S R+ A
Sbjct: 305 RVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHA 364
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ ++ +M +G DV Y S + A C+ + A L ++ G N+ TYNILI
Sbjct: 365 WELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDG 424
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ G E A +F ++L KG TY ++ GLC E A + K
Sbjct: 425 LCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEK 475
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 145/361 (40%), Gaps = 53/361 (14%)
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A + L++ P + + V + +G + VL K K+G P T I
Sbjct: 67 AISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIK 126
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVP 363
GL + ++ EA + +++ F +++ LI + + + R+A+ + K
Sbjct: 127 GLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNT 186
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ S + +LCK E E+Y + D+ +++ ++ C G+ +EA+G+
Sbjct: 187 NVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLF 246
Query: 424 QEMKRKGLDPDVSFYNSLMEACCRE-----------------DLLRPAKKLWDQMFASGC 466
EM ++PDV +N L++A C+E + + AK +++ +
Sbjct: 247 HEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRV 306
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL--------------- 511
+ ++ +Y I+I + ++ ++ AL LF+ M KG+ PD TY+SL
Sbjct: 307 TPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWE 366
Query: 512 --------------------LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
L LC+ + A + K + + + + + LC
Sbjct: 367 LLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLC 426
Query: 552 R 552
+
Sbjct: 427 K 427
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 102/248 (41%), Gaps = 37/248 (14%)
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV--YKVLSANDYFTD 399
+ +D AI F M+ P++ + + +L K N ++ + + Y L N
Sbjct: 23 NHVDVHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPS 82
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ ++N +++ C G + A+ V+ ++ + G PD +L++ C + A D
Sbjct: 83 IVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHD 142
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALR---------------------------- 491
+ A G N +Y ILI+ ++GE AL+
Sbjct: 143 HVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEK 202
Query: 492 -------LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILS 544
L+ M+ K V+PD T+++L+ G C + AF +F++ V ++ +
Sbjct: 203 LVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFN 262
Query: 545 TFMISLCR 552
+ +LC+
Sbjct: 263 ILVDALCK 270
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 165/362 (45%), Gaps = 9/362 (2%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-L 231
A+ + D M RG + + + +GV + C+ + ++L+ K E + I V+
Sbjct: 133 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN---KMEAAKIEADVVIFNT 189
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
II CK + V++A + E+ + +P+ + Y + G + +L +
Sbjct: 190 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 249
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSSIDP-RS 348
+ P + I + E + EA++L + ++ K +ID D+ N+LI D
Sbjct: 250 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMI--KRSIDPDIFTYNSLINGFCMHDRLDK 307
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A F FM+ K P L T + L K CK + ++ E+++ +S D +Y ++
Sbjct: 308 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 367
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L G A V ++M G+ PD+ Y+ L++ C L A +++D M S
Sbjct: 368 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 427
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ Y +I + G+++ LF ++ KGV P+ TY +++ GLC + LQ A+ +
Sbjct: 428 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 487
Query: 529 NK 530
K
Sbjct: 488 KK 489
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 146/321 (45%), Gaps = 1/321 (0%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+++G+C GKR+ +A ++D++ +PD I + + L E ++ + + G
Sbjct: 85 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 144
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAI 350
P Y + GL I A L + + K D + N +I S+ A+
Sbjct: 145 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 204
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
F M KG P + T S+L LC + + ++ + ++ ++N ++
Sbjct: 205 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 264
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
G+ EA + +M ++ +DPD+ YNSL+ C D L AK++++ M + C +L
Sbjct: 265 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 324
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TYN LI F + +E LF M +G+ D TYT+L++GL + + A +VF +
Sbjct: 325 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 384
Query: 531 SVNHDVMLARSILSTFMISLC 551
V+ V S + LC
Sbjct: 385 MVSDGVPPDIMTYSILLDGLC 405
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 161/368 (43%), Gaps = 9/368 (2%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK---REN 220
L G ID A + ++M +E + F I C+ + L++ E+ R N
Sbjct: 159 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 218
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
+ S+I+ L +G R +A ++L ++ ++ P+ + + + + F G E
Sbjct: 219 VVTYSSLISCLCSYG-----RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 273
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-G 339
E + K + P Y I G + R+ +AK++ E +VS D D N LI G
Sbjct: 274 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 333
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
S F M +G V T + L + L D +V+K + ++ D
Sbjct: 334 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 393
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ +Y++++ LC +G+L +A V M++ + D+ Y +++E C+ + L+
Sbjct: 394 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 453
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+ G N+ TYN +IS ++ A L M E G PD+ TY +L+ ++
Sbjct: 454 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 513
Query: 520 NLQAAFEV 527
+ A+ E+
Sbjct: 514 DKAASAEL 521
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 110/506 (21%), Positives = 214/506 (42%), Gaps = 66/506 (13%)
Query: 42 GLRDSLSPSLVARVIN----PYLLTHHSLALGFF--NWASQ-------------QPNFTH 82
G R S + +LV +++ P +T +L G F N AS+ QPN
Sbjct: 92 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL-- 149
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
++Y ++ L I+ ++L +++ KI D ++ II SL + ++ A ++F
Sbjct: 150 --VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 207
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E++ + I P + +SL++ L S G +A ++ +M + + + + F I F
Sbjct: 208 KEME--TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 265
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ K + + D++ KR I+ + +I+GFC R+++A ++ + + ++C P
Sbjct: 266 KEGKFVEAEKLHDDMIKRS---IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 322
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D Y + + F V + + ++ G+ T Y I GL + A+++
Sbjct: 323 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV- 381
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
F M+ G P + T S L LC
Sbjct: 382 ---------------------------------FKQMVSDGVPPDIMTYSILLDGLCNNG 408
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K ++ +EV+ + ++ D+ Y M+ +C +G++ + + + + KG+ P+V YN
Sbjct: 409 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 468
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+++ C + LL+ A L +M G + TYN LI G+ + L M
Sbjct: 469 TMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 528
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAF 525
DA+T L+ + + L +F
Sbjct: 529 RFVGDAST-IGLVANMLHDGRLDKSF 553
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 120/271 (44%), Gaps = 1/271 (0%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+L K KLG P + G +RI +A L + +V + D LI +
Sbjct: 66 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 125
Query: 343 SIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ S A+ + M+++G P L T + LCKR D + + A D+
Sbjct: 126 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 185
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+N ++ LC + +A + +EM+ KG+ P+V Y+SL+ C A +L M
Sbjct: 186 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 245
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ NL T+N LI F + G+ A +L +M+++ + PD TY SL+ G C L
Sbjct: 246 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 305
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A ++F V+ D +T + C+
Sbjct: 306 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 336
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 139/595 (23%), Positives = 253/595 (42%), Gaps = 76/595 (12%)
Query: 15 QAIISASNR-TRPARKWTPLLEQTLHQLG----LRDSLSPSLVARVINP----YLLTHHS 65
QA+++A R +PARK L+ + + G R + S+ AR I P Y H+
Sbjct: 260 QAVVTAFERIKKPARKEYGLMVKYYARRGDMHHARQTFE-SMQARGIEPSSHVYSSLIHA 318
Query: 66 LALGFFNWAS-------QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLD 118
A+G + ++ + ++Y I+ + + +A D K+ K +L+
Sbjct: 319 YAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLN 378
Query: 119 SSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFD 178
+ Y II + Q N +A ++ E++ D +I ++++ G + L +FD
Sbjct: 379 AVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFD 438
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFC 237
+ G S I +G I + K+G+V L + + S I ++ ++I+GF
Sbjct: 439 RLKECGFSPSVISYGCLINLY---TKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFL 495
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK---------- 287
K K AF V ++ KPD + Y + F M S +R + + K+
Sbjct: 496 KLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGM-SNMDRAICMVKQMQKERYRPTT 554
Query: 288 --------------------------RKLGVAPRTNDYREFILGLIVERRICEAKE-LGE 320
R+ G P + Y ILGL+ +R++ +A L +
Sbjct: 555 RTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQ 614
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ V+G + + G S D A +F+ + +G + T L K+ CK +
Sbjct: 615 MNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGR 674
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+ V K +SA + + YN+++ G + EA ++Q+M+++G+ PD+ Y S
Sbjct: 675 MQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTS 734
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+ ACC+ ++ A ++ +M A G NLKTY LI+ ++ E AL F M
Sbjct: 735 FVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAE 794
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
+ PD Y L+ L +A F A+S + + ++S+CR ++
Sbjct: 795 LKPDKAAYHCLMTSLLS----RATF-------------AQSYVYSGLLSVCREMI 832
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 118/508 (23%), Positives = 220/508 (43%), Gaps = 20/508 (3%)
Query: 32 PLLEQTLHQLG--LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHS 89
P LE L + G +R L +++R + +L FF WAS+QP + HS Y +
Sbjct: 115 PKLELALQESGVIMRSGLPERVLSRCGDA-----GNLGYRFFVWASKQPGYRHSYEVYKA 169
Query: 90 ILKSLSLSRQINAIDSVLKQV-KVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV-KF 147
++K+L RQ A+ ++++++ K N L V+ ++ + +KA V +E+ K+
Sbjct: 170 MIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKY 229
Query: 148 NCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
CE P+ + LL L +G + A +F++M R + F ++ +C K+
Sbjct: 230 GCE---PDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPNLRHFTSLLYGWCREGKI 285
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ +L V+ +E V+ ++ G+ + ++ +AF +L E++ C P+ ++
Sbjct: 286 MEAKHVL--VQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFT 343
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE-LGEVIVS 324
I+ + F + E + + + G Y I G +A E L ++I
Sbjct: 344 ILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQK 403
Query: 325 GKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
G L ++ + + M + G VP L+ + + + +CK E
Sbjct: 404 GHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEA 463
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL--DPDVSFYNSLM 442
V ++ + A +++Y +MV + G L EA +EM +GL P L
Sbjct: 464 VRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELT 523
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
A R + L AK +W M GC N+ + I I G ++ A +M++ +
Sbjct: 524 NALLRAEKLEMAKNMWSCMTTKGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLM 583
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNK 530
P T+ L+ GL + + Q A E+ K
Sbjct: 584 PQPDTFAKLMRGLKKLFHRQLAVEITEK 611
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 161/340 (47%), Gaps = 9/340 (2%)
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ G V ++++E+RK M+ V VL+ F + V++A +VLDE+ C+PD
Sbjct: 179 QFGAVWALIEEMRKENPYMLTPEVFIVLM-RRFASVRMVKKAVEVLDEMPKYGCEPDEYV 237
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+ + + GSV E + + R + P + + G E +I EAK + I
Sbjct: 238 FGCLLDALCKNGSVKEAASLFEDMR-VRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIK 296
Query: 324 SGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRV---PTLSTLSNLSKNLCKRN 379
F D V N L+G + R A F+ + E +V P ++ + L ++ CK
Sbjct: 297 EAGFEPDIVVYNNLLGGYAQAGKMRDA---FDLLAEMKKVNCGPNAASFTILIQSFCKTE 353
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K DE + ++ + + D+ +Y ++S C G +AY ++ +M +KG DP Y
Sbjct: 354 KMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYL 413
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+M A +++ L +L ++M GC +L YN +I ++G+++ A+RL+ M
Sbjct: 414 CIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAG 473
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
G+ P TY ++ G + L A + F + V ++ A
Sbjct: 474 GLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSA 513
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 93/190 (48%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P L ++L C+ K E V + + D+ YN ++ +G++R+A+ +
Sbjct: 267 PNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDL 326
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ EMK+ P+ + + L+++ C+ + + A +++ +M SGC ++ TY LIS F +
Sbjct: 327 LAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCK 386
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
G + A + +M++KG P +Y ++ ++ L+ E+ + + +I
Sbjct: 387 WGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNI 446
Query: 543 LSTFMISLCR 552
+T + +C+
Sbjct: 447 YNTMIRLVCK 456
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 126/564 (22%), Positives = 244/564 (43%), Gaps = 53/564 (9%)
Query: 30 WTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHS 89
W +E L +L L + P LV V+ L + A+ +F WA + + H +Y+S
Sbjct: 80 WGSSVENRLAELDLNPN--PELVIGVLRR--LKDVNNAVNYFRWAERLTDRAHCREAYNS 135
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS---VFNEVK 146
+L ++ +R+ N ++ +L+++ + ++ I+ S I+ + ++AF+ ++K
Sbjct: 136 LLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLK 195
Query: 147 F--------------------NC--------EDIG----PEICNSLLAVLASDGYIDNAL 174
F +C +++G + +L+ V A +G +D AL
Sbjct: 196 FRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAAL 255
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIH 234
+ DEM +E + + V I F + K+ E++ N ++ V +I
Sbjct: 256 SLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKA--NGLVLDDVTYTSMIG 313
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
CK R+ EA ++ + + + P AY + + + G + +L+++R+ G P
Sbjct: 314 VLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIP 373
Query: 295 RTNDYREFILGLIVERRICEA-KELGEVIVSGKFTIDD-DVLNALIGSVSSIDP-RSAIV 351
Y + L + ++ EA K+ E+ K I + N +I + +A+V
Sbjct: 374 SVVSYNCILSCLGRKGQVDEALKKFEEM---KKDAIPNLSTYNIMIDMLCKAGKLETALV 430
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
+ M + G P + T++ + LCK + D+ +++ L D +Y ++ L
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLG 490
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLME---ACCREDLLRPAKKLWDQMFASGCSG 468
GR+ EAY + ++M P+ Y SL+ C R++ K++++M GCS
Sbjct: 491 RHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKE---DGHKIYNEMLRLGCSP 547
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+L N + + GEIE LF + G PDA +YT L+ GL + A+E+F
Sbjct: 548 DLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELF 607
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
+L +T + C+
Sbjct: 608 YTMKEQGCVLDTRAYNTVIDGFCK 631
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 201/453 (44%), Gaps = 20/453 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y S++ L + ++N + + + NK + Y +I + A+S+
Sbjct: 306 VTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLER 365
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGV-EFSTIGFGVFIWKFCE 201
+ + P + N +L+ L G +D ALK F+EM + ST + + I C+
Sbjct: 366 QRR--KGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLST--YNIMIDMLCK 421
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
KL L + D ++ ++ + +VI V +++ CK +R+++A + + L + C+PD
Sbjct: 422 AGKLETALVVRDAMK---DAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPD 478
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ Y + E G V E + ++ P Y I C KE G
Sbjct: 479 AVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFK----CGRKEDGH 534
Query: 321 VIVSGKFTI----DDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
I + + D +LN + V + + F + G +P + + L L
Sbjct: 535 KIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGL 594
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
K + E E++ + D +YN ++ C SG++ +AY +++EMK KG +P V
Sbjct: 595 VKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTV 654
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y S+++ + D L A L+++ + G N+ Y+ LI F +VG I+ A +
Sbjct: 655 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEE 714
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+++KG+ P+ T+ LL+ L + + A F
Sbjct: 715 LMQKGLTPNVYTWNCLLDALVKAEEISEALVCF 747
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 200/453 (44%), Gaps = 12/453 (2%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S +SY+ IL L Q++ +++K + I + S Y +I L + + A V
Sbjct: 374 SVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALVVR 432
Query: 143 NEVKFNCEDIG--PEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ +K D G P + N ++ L +D+A +F+ + H+ + + I
Sbjct: 433 DAMK----DAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEG 488
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
+ ++ + + +++ + + I +V+ +I F K R E+ K+ +E+ C
Sbjct: 489 LGRHGRVDEAYKLYEQML--DANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCS 546
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD + + G + + + ++ + LG P Y I GL+ EA EL
Sbjct: 547 PDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYEL 606
Query: 319 GEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ +D N +I G S A M KG PT+ T ++ L K
Sbjct: 607 FYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAK 666
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
++ DE +++ + ++ Y+ ++ GR+ EAY +++E+ +KGL P+V
Sbjct: 667 IDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 726
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
+N L++A + + + A + M C+ N TY+ILI ++ + A + M
Sbjct: 727 WNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQ 786
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
++G P+ TYT+++ GL + N+ A +F K
Sbjct: 787 KQGFKPNVFTYTTMISGLAKAGNIVEADTLFEK 819
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 100/473 (21%), Positives = 203/473 (42%), Gaps = 24/473 (5%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
+ ++++ + +++A S+L ++K N + D +Y I + A+ F+E+K
Sbjct: 238 FTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMK 297
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
N + S++ VL ++ A+++F+ M + I + K
Sbjct: 298 ANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFE 357
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
S+L+ R+R I V I+ + +V+EA K +E++ ++ P+ Y I
Sbjct: 358 DAYSLLE--RQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK-KDAIPNLSTYNI 414
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV--IVS 324
+ + G + VV + G+ P + ++V+R +C+A+ L + I
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAGLFPNV-----ITVNIMVDR-LCKAQRLDDACSIFE 468
Query: 325 G---KFTIDDDV----LNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
G K D V L +G +D A + M++ ++P ++L +N K
Sbjct: 469 GLDHKTCRPDAVTYCSLIEGLGRHGRVD--EAYKLYEQMLDANQIPNAVVYTSLIRNFFK 526
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ ++ ++Y + D+ N + + +G + + + QE+K G PD
Sbjct: 527 CGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARS 586
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
Y L+ + A +L+ M GC + + YN +I F + G++ A +L M
Sbjct: 587 YTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMK 646
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSILSTF 546
KG P TY S+++GL + L A+ +F +K + +V++ S++ F
Sbjct: 647 TKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGF 699
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 182/410 (44%), Gaps = 11/410 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQ-VKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
++Y S+++ L +++ + +Q + N+I ++ VY +I + + + ++N
Sbjct: 480 VTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIP-NAVVYTSLIRNFFKCGRKEDGHKIYN 538
Query: 144 E-VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E ++ C P++ N+ + + G I+ +F E+ + G + + I
Sbjct: 539 EMLRLGCS---PDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLV 595
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + + ++ E + + +I GFCK +V +A+++L+E++ + +P
Sbjct: 596 KAGFAHEAYELFYTMK--EQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPT 653
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ Y V + + + E ++ ++ + G+ Y I G RI EA + E
Sbjct: 654 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIME 713
Query: 321 VIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
++ T + N L+ + V + + A+V F M + P T S L LCK
Sbjct: 714 ELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIR 773
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K ++ ++ + + ++ +Y M+S L +G + EA + ++ K KG D + YN
Sbjct: 774 KFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYN 833
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
+++E + A +L+++ GCS KT +L+ + IE A
Sbjct: 834 AIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 130/298 (43%), Gaps = 5/298 (1%)
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
++IHG K EA+++ ++ + C D AY V + F G V + +L++ +
Sbjct: 588 TILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKT 647
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---GSVSSIDP 346
G P Y I GL R+ EA L E S ++ + ++LI G V ID
Sbjct: 648 KGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRID- 706
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A + +++KG P + T + L L K + E + ++ + + +Y+++
Sbjct: 707 -EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSIL 765
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC + +A+ QEM+++G P+V Y +++ + + A L+++ G
Sbjct: 766 IHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGG 825
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
+ YN +I S A RLF KG + T LL+ L + ++ A
Sbjct: 826 VADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883
>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Glycine max]
Length = 618
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 121/562 (21%), Positives = 245/562 (43%), Gaps = 82/562 (14%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVN-KITLDSSVYR 123
S AL +F WAS PNF HS +Y +++ L R+ + + +L ++ + ++
Sbjct: 50 SEALEYFRWASTVPNFVHSQSTYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIFI 109
Query: 124 FIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDE-MS 181
II L + + T+ V + V KF+ +I NS+L VL + ID A + + + M
Sbjct: 110 TIIRGLGRARMTRTVIKVLDLVYKFHGSP-SLKIFNSILDVLVKED-IDMAREFYRKSMM 167
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
GVE FG+ + C ++G+ +L ++ R + +V+ ++H C+ +
Sbjct: 168 ASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIKSR--GVAPNTVVYNTLLHALCRNGK 225
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
V A +++E+ P+ + + I+ + G+ + V+L+K +G P +
Sbjct: 226 VGRARNLMNEME----DPNDVTFNILISGYCKEGNSVQALVLLEKSFSMGFVPDVVSVTK 281
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKG 360
+ L R EA E+ E + S +D N LI G + + + F M KG
Sbjct: 282 VLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKG 341
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
+P + T + L + D ++++ + + + +++ ++ LC+ R+ + +
Sbjct: 342 CLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCSEERIEDGF 401
Query: 421 GVIQEMK--RKGLDPDVSFYNSLMEAC--------------------------------- 445
+++ M+ ++G +S YNS++
Sbjct: 402 SILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKMGNLFPRAVDRSLMILEH 461
Query: 446 CREDLLRPAKKLWDQMFASG---------C-------SGNLK------------------ 471
C++ + AK+++DQM G C GN++
Sbjct: 462 CKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIP 521
Query: 472 -TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
T+N +I+ F G++E AL+L ++ +G P+ TY+ L++ LC+ +LQ A +VF +
Sbjct: 522 STFNAVITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQ 581
Query: 531 SVNHDVMLARSILSTFMISLCR 552
V+ ++ I ++ ++SL +
Sbjct: 582 MVDKGILPDLFIWNSLLLSLSQ 603
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 80/186 (43%), Gaps = 4/186 (2%)
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL--ASDGYIDNALKMFDEMSHRGV 185
S+I G + F E ++ P + L +L G I++A +++D+M G
Sbjct: 423 SIIYGLLKKNGFDESAEFLTKMGNLFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGG 482
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
S + + + F + + + + +++E+ I + AV I GFC+ +VE A
Sbjct: 483 IPSILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAV--ITGFCRQGKVESA 540
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
K+++++ R C P+ Y + + G + + V + G+ P + +L
Sbjct: 541 LKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGILPDLFIWNSLLLS 600
Query: 306 LIVERR 311
L ER
Sbjct: 601 LSQERH 606
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/442 (22%), Positives = 188/442 (42%), Gaps = 42/442 (9%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMF 177
D Y +I Q N ++A + ++ + + + + LL+ L G +D AL++
Sbjct: 290 DLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLL 349
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV---RKRENSMINGSVIAVLIIH 234
EM ++ + + + I C+ K+ Q + + E+ R NS + I+
Sbjct: 350 YEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSG-----ILK 404
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
G C+ + +A D L + +PD Y I+ + + +G V E + K+ R + P
Sbjct: 405 GLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITP 464
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFN 354
+ I G R++ EA+ L E I
Sbjct: 465 SIVTFNSLIYGFCKNRKVVEARRLLESIKL------------------------------ 494
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
G P+ T + L C+ ++L E+ ++ D + +Y V++ LC
Sbjct: 495 ----HGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQR 550
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+L E+ ++++M+ KGL PD YN++++ C+ +R A +L D M TYN
Sbjct: 551 KLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYN 610
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
+LI G++E A R+ ++ ++ + YT++++ C + + Q A +VF++ V
Sbjct: 611 VLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEK 670
Query: 535 DVMLARSILSTFMISLCRRVLI 556
++ S + LC+R LI
Sbjct: 671 GFEVSIKDYSAVINRLCKRCLI 692
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/509 (21%), Positives = 221/509 (43%), Gaps = 72/509 (14%)
Query: 70 FFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQ------------------VK 111
F++ + + F HS +S + L+ R+ + VL Q VK
Sbjct: 49 FYHLSRNEFGFQHSRVSRFLVSHVLARKRRFKDLRLVLDQMLQEEVASRMVHDALFVLVK 108
Query: 112 VNKITLDSSV--YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGY 169
+ + L S+ Y ++ +L ++T + V+N++K + + ++ L
Sbjct: 109 MKEQNLRPSIQTYNSLLYNL---RHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSR 165
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR------ENSMI 223
+A+ + + S + F + ++C KLG L +V K + ++
Sbjct: 166 FRDAVLFLRQNDGKEFAPSVVSFNTIMSRYC---KLG-----LADVAKSFFCMMLKYGIL 217
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF-EREV 282
+ ++IHG +EEA ++ +++ + +PD + Y+IVA+ F L+G + RE+
Sbjct: 218 PDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREI 277
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+ K G+ P Y I G I EA L ++S F LN ++ SV
Sbjct: 278 IQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQ-----LNVILYSV- 331
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
L +LCKR + DE +++ + AN+ D+ +
Sbjct: 332 ----------------------------LLSSLCKRGQVDEALQLLYEMEANNLQPDLVT 363
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y++++ LC G++++A + +EM + P+ ++ +++ C + +L A+ +D +
Sbjct: 364 YSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLI 423
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
S ++ YNI+I + ++G++E A+RL+ + +K + P T+ SL+ G C+ +
Sbjct: 424 MSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVV 483
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLC 551
A + H + + +T M + C
Sbjct: 484 EARRLLESIKLHGLEPSAVTYTTLMNAYC 512
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 104/499 (20%), Positives = 208/499 (41%), Gaps = 24/499 (4%)
Query: 25 RPARKWTPLLEQTLHQLGL----RDSLSPSLVARVINPYLLTHHSLALGFFNWASQQ--- 77
+P ++ + H LGL R+ + L + P L+T+ L G + +
Sbjct: 252 QPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEAL 311
Query: 78 --------PNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSL 129
F + + Y +L SL Q++ +L +++ N + D Y +I L
Sbjct: 312 RLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGL 371
Query: 130 IQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
+ Q+A ++ E+ FN I P + +L L G + +A FD + +
Sbjct: 372 CKQGKVQQAIQLYKEMCFN--RIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRP 429
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAF 246
+ + I + KLG V + ++ + I S++ +I+GFCK ++V EA
Sbjct: 430 DVTLYNIMIDGY---VKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEAR 486
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
++L+ +++ +P + Y + + G++ + +L + + P Y I GL
Sbjct: 487 RLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGL 546
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTL 365
+R++ E+ +L E + + D N +I + D R A + M+ PT
Sbjct: 547 CKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTP 606
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
+T + L LC+ ++ V L + +Y M+ C G + A V +
Sbjct: 607 ATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQ 666
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M KG + + Y++++ C+ L+ AK + M + G S + + + ++++ F G
Sbjct: 667 MVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGH 726
Query: 486 IEGALRLFHNMLEKGVAPD 504
+ L M++ G+ D
Sbjct: 727 VHSVFELLAVMIKFGLLHD 745
>gi|356528212|ref|XP_003532699.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Glycine max]
Length = 738
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 128/545 (23%), Positives = 246/545 (45%), Gaps = 27/545 (4%)
Query: 28 RKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSY 87
R WT L+ ++ L PSLV V++ H AL F+ W + FTH+P +
Sbjct: 67 RAWTTRLQNSIRSL--VPEFDPSLVYNVLHGAASPEH--ALQFYRWVERAGLFTHTPETT 122
Query: 88 HSILKSLSLSRQINAIDSVL---KQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
I++ L ++N +L + ++ T+ + +I S + Q++ +F +
Sbjct: 123 LKIVQILGRYSKLNHARCILFDDTRGGASRATVTEDAFVSLIDSYGRAGIVQESVKLFKK 182
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+K D + ++L V+ G A + ++ M + VE + + + +W + +
Sbjct: 183 MKELGVDRTVKSYDALFKVILRRGRYMMAKRYYNAMLNESVEPTRHTYNILLWGMFLSLR 242
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + ++++ R ++ V +I+G+ + K+VEEA K+ E++ R+ P+ I++
Sbjct: 243 LDTAVRFYEDMKSR--GILPDVVTYNTLINGYFRFKKVEEAEKLFVEMKGRDIVPNVISF 300
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE-LGEVIV 323
+ + + G + + V ++ + GV P + + GL ++ EA++ LGE++
Sbjct: 301 TTMLKGYVAAGQIDDALKVFEEMKGCGVKPNAVTFSTLLPGLCDAEKMAEARDVLGEMVE 360
Query: 324 SGKFTIDDDVLNALIG-SVSSIDPRSAIVFFNFMIEKGRVPT-LSTLSNLSKNLCKRNKS 381
D+ V L+ + D +A MI + +PT L +N CK N
Sbjct: 361 RYIAPKDNAVFMKLMSCQCKAGDLDAAGDVLKAMI-RLSIPTEAGHYGVLIENFCKANLY 419
Query: 382 -------DELVEVYKVL-SANDYFTDM-----ESYNVMVSFLCTSGRLREAYGVIQEMKR 428
D+++E VL N Y T++ +YN+M+ +LC GR +A +++ +
Sbjct: 420 DKAEKLLDKMIEKEIVLRQKNAYETELFEMEPSAYNLMIGYLCEHGRTGKAETFFRQLMK 479
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
KG+ VSF N+L+ +E A ++ M G + + +Y +LI + GE
Sbjct: 480 KGVQDSVSF-NNLICGHSKEGNPDSAFEIIKIMGRRGVARDADSYRLLIESYLRKGEPAD 538
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
A MLE G P+++ Y S++E L + +Q A V V V ++S +
Sbjct: 539 AKTALDGMLESGHLPESSLYRSVMESLFDDGRVQTASRVMKSMVEKGVKENMDLVSKVLE 598
Query: 549 SLCRR 553
+L R
Sbjct: 599 ALLMR 603
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 108/479 (22%), Positives = 202/479 (42%), Gaps = 54/479 (11%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+ +L + LS +++ + +K I D Y +I + K ++A +F E+
Sbjct: 229 TYNILLWGMFLSLRLDTAVRFYEDMKSRGILPDVVTYNTLINGYFRFKKVEEAEKLFVEM 288
Query: 146 KFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
K DI P + + ++L + G ID+ALK+F+EM GV+ + + F + C+
Sbjct: 289 K--GRDIVPNVISFTTMLKGYVAAGQIDDALKVFEEMKGCGVKPNAVTFSTLLPGLCDAE 346
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
K+ + +L E+ +R + + +V L+ CK ++ A VL + IR P
Sbjct: 347 KMAEARDVLGEMVERYIAPKDNAVFMKLM-SCQCKAGDLDAAGDVLKAM-IRLSIPTEAG 404
Query: 264 -YRIVAEEF----------KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
Y ++ E F KL+ + E+E+VL++K N Y +
Sbjct: 405 HYGVLIENFCKANLYDKAEKLLDKMIEKEIVLRQK---------NAYETEL--------- 446
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNL 371
F ++ N +IG + A FF +++KG ++S +NL
Sbjct: 447 --------------FEMEPSAYNLMIGYLCEHGRTGKAETFFRQLMKKGVQDSVS-FNNL 491
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
K D E+ K++ D +SY +++ G +A + M G
Sbjct: 492 ICGHSKEGNPDSAFEIIKIMGRRGVARDADSYRLLIESYLRKGEPADAKTALDGMLESGH 551
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
P+ S Y S+ME+ + ++ A ++ M G N+ + ++ G +E AL
Sbjct: 552 LPESSLYRSVMESLFDDGRVQTASRVMKSMVEKGVKENMDLVSKVLEALLMRGHVEEALG 611
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
H ++ G PD + LL LC++ AA ++ + + D ++ SI + +L
Sbjct: 612 RIHLLMLNGCEPD---FDHLLSVLCEKEKTIAALKLLDFVLERDCIIDFSIYDKVLDAL 667
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 85/462 (18%), Positives = 183/462 (39%), Gaps = 77/462 (16%)
Query: 53 ARVINPYLLTHHSLALGFFNWASQQP-----------NFTHSPLSYHSILKSLSLSRQIN 101
+R I P ++T+++L G+F + + + + +S+ ++LK + QI+
Sbjct: 255 SRGILPDVVTYNTLINGYFRFKKVEEAEKLFVEMKGRDIVPNVISFTTMLKGYVAAGQID 314
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK--------------- 146
V +++K + ++ + ++P L + +A V E+
Sbjct: 315 DALKVFEEMKGCGVKPNAVTFSTLLPGLCDAEKMAEARDVLGEMVERYIAPKDNAVFMKL 374
Query: 147 FNCE------DIGPEICNSL--LAVLASDGYI-------------DNALKMFDEMSHRGV 185
+C+ D ++ ++ L++ G+ D A K+ D+M + +
Sbjct: 375 MSCQCKAGDLDAAGDVLKAMIRLSIPTEAGHYGVLIENFCKANLYDKAEKLLDKMIEKEI 434
Query: 186 -------------EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
E + + I CE+ + G+ + ++ K+ + SV +
Sbjct: 435 VLRQKNAYETELFEMEPSAYNLMIGYLCEHGRTGKAETFFRQLMKKG---VQDSVSFNNL 491
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I G K + AF+++ + R D +YR++ E + G + + L + G
Sbjct: 492 ICGHSKEGNPDSAFEIIKIMGRRGVARDADSYRLLIESYLRKGEPADAKTALDGMLESGH 551
Query: 293 APRTNDYREFILGLIVERRICEA----KELGEVIVSGKFTIDDDVLNALI--GSVSSIDP 346
P ++ YR + L + R+ A K + E V + VL AL+ G V
Sbjct: 552 LPESSLYRSVMESLFDDGRVQTASRVMKSMVEKGVKENMDLVSKVLEALLMRGHVEEALG 611
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
R ++ N G P L ++ LC++ K+ +++ + D D Y+ +
Sbjct: 612 RIHLLMLN-----GCEPDFDHLLSV---LCEKEKTIAALKLLDFVLERDCIIDFSIYDKV 663
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+ L +G+ AY ++ ++ KG D S + L+++ +E
Sbjct: 664 LDALLAAGKTLNAYSILCKILEKGGSTDWSSRDELIKSLNQE 705
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 119/507 (23%), Positives = 223/507 (43%), Gaps = 67/507 (13%)
Query: 31 TPLLEQTLHQLGLRDSLSPSLVARVI----NPYLLTHHSLALGFF--NWASQ-------- 76
+ LL H G R S + +LV +++ P +T ++L G F N AS+
Sbjct: 155 SSLLNGYCH--GKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRM 212
Query: 77 -----QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQ 131
QP+ +Y +++ L I+ S+LK+++ KI + +Y II L +
Sbjct: 213 VARGCQPDL----FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCK 268
Query: 132 GKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
K+ AF +FN K + I P++ NSL++ L + G +A ++ +M R + +
Sbjct: 269 YKHMDDAFDLFN--KMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 190 IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKV 248
+ F I F + KL + + DE+ +R I+ +++ +I+GFC R++EA ++
Sbjct: 327 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRS---IDPNIVTYNSLINGFCMHDRLDEAQQI 383
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
+ ++C PD + Y + + F V E + ++ + G+ T Y I GL
Sbjct: 384 FTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF- 442
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTL 368
+ G+ ++ K F M+ G P + T
Sbjct: 443 --------QAGDCDMAQKI-------------------------FKKMVSDGVPPDIITY 469
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
S L LCK K ++ + V++ L + ++ +YN+M+ +C +G++ + + + +
Sbjct: 470 SILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
KG+ P+V Y +++ CR+ L A L+ +M G + YN LI G+
Sbjct: 530 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAA 589
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ L M G DA+T + ++ L
Sbjct: 590 SAELIKEMRSCGFVGDASTISMVINML 616
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 181/398 (45%), Gaps = 7/398 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
+ LL+ +A D + + ++M + G+ + + + + FC ++L L++L ++ K
Sbjct: 85 SKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMK 144
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E ++ S + ++G+C GKR+ EA ++D++ KPD + + + L
Sbjct: 145 LGYEPDIVTLSSL----LNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHN 200
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E ++ + G P Y + GL I A L + + GK + + N
Sbjct: 201 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYN 260
Query: 336 ALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I + A FN M KG P + T ++L LC + + + +
Sbjct: 261 TIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIER 320
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ ++N ++ G+L EA + EM ++ +DP++ YNSL+ C D L A
Sbjct: 321 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 380
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++++ M + C ++ TYN LI F + +E + LF M ++G+ + TY +L++G
Sbjct: 381 QQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 440
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L Q + A ++F K V+ V S + LC+
Sbjct: 441 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 478
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 175/375 (46%), Gaps = 9/375 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L A+ + D M RG + +G + C+ + LS+L +K
Sbjct: 190 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL---KK 246
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E I +V+ II G CK K +++AF + +++ + KPD Y + G
Sbjct: 247 MEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGR 306
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL-- 334
+ +L + + P + I E ++ EA++L + ++ + +ID +++
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI--QRSIDPNIVTY 364
Query: 335 NALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N+LI D A F M+ K +P + T + L K CK + +E +E+++ +S
Sbjct: 365 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQ 424
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ +YN ++ L +G A + ++M G+ PD+ Y+ L++ C+ L
Sbjct: 425 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 484
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A +++ + S N+ TYNI+I + G++E LF ++ KGV P+ YT+++
Sbjct: 485 ALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 544
Query: 514 GLCQETNLQAAFEVF 528
G C++ + A +F
Sbjct: 545 GFCRKGLKEEADALF 559
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 159/357 (44%), Gaps = 3/357 (0%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
AL + +M G E + + +C ++ + ++++D++ E +V +
Sbjct: 135 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMV--EMGYKPDTVTFNTL 192
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
IHG + EA ++D + R C+PD Y V G + +LKK K +
Sbjct: 193 IHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 252
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIV 351
Y I GL + + +A +L + + D N+LI + + S A
Sbjct: 253 EANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASR 312
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
+ MIE+ P + T ++L K K E +++ + ++ +YN +++ C
Sbjct: 313 LLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 372
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
RL EA + M K PDV YN+L++ C+ + +L+ +M G GN
Sbjct: 373 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 432
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
TYN LI + G+ + A ++F M+ GV PD TY+ LL+GLC+ L+ A VF
Sbjct: 433 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 489
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 80/214 (37%), Gaps = 35/214 (16%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+S + A+ F M++ P++ S L + K NK D ++ + + + +
Sbjct: 56 GLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHN 115
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+Y+++++ C +L A V+ +M + G +PD+ +SL+ C + A L D
Sbjct: 116 HYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 175
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
QM +E G PD T+ +L+ GL
Sbjct: 176 QM-----------------------------------VEMGYKPDTVTFNTLIHGLFLHN 200
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
A + ++ V T + LC+R
Sbjct: 201 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 234
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 119/531 (22%), Positives = 219/531 (41%), Gaps = 43/531 (8%)
Query: 66 LALGFFNWASQ-QPNFTHSPLSYHSILKSLSLSRQI-NAIDSVLKQVKVNKITLDSSVYR 123
L LGF + + F +++ +LK L ++ +A+D VL+++ + Y
Sbjct: 103 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYN 162
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLAS---DGYIDNALKMFDEM 180
++ L +Q+A + + + + P S V+ +G D A + EM
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
RG+ + + I C+ + + + +L+ + K N ++ + I+HG+C
Sbjct: 223 LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK--NGVMPDCMTYNSILHGYCSSG 280
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+ +EA L ++R +PD + Y ++ + G E + K G+ P Y
Sbjct: 281 QPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYG 340
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---------------------- 338
+ G + + E L +++V D V + LI
Sbjct: 341 TLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQ 400
Query: 339 ---------GSVSSIDPRS-----AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
G+V I +S A+++F MI++G P ++L LC NK +
Sbjct: 401 GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 460
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
E+ + + +N ++ C GR+ E+ + + M R G+ P+V YN+L+
Sbjct: 461 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLING 520
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C + A KL M + G N TY+ LI+ + ++ +E AL LF M GV+PD
Sbjct: 521 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPD 580
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
TY +L+GL Q AA E++ + + S + + LC+ L
Sbjct: 581 IITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKL 631
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 183/426 (42%), Gaps = 50/426 (11%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
++A +FDE+ RG S G + ++ V R + +
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER------EVVL 284
++I C+ R++ F L + + + D IA+ + L G ++ ++VL
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPL-----LKGLCADKRTSDAMDIVL 146
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS--GKFTIDDDVLNALI--GS 340
++ +LG P Y + GL E R EA EL ++ G + D V + G
Sbjct: 147 RRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGF 206
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
D A ++ M+++G +P + T +++ LCK D+ +EV + N D
Sbjct: 207 FKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDC 266
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+YN ++ C+SG+ +EA G +++M+ G++PDV Y+ LM+ C+ A+K++D
Sbjct: 267 MTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDS 326
Query: 461 MFASGCSGNLKTY-----------------------------------NILISKFSEVGE 485
M G + TY +ILI ++ G+
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGK 386
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
++ A+ +F M ++G+ P+A TY +++ LC+ ++ A F + ++ + + ++
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 546 FMISLC 551
+ LC
Sbjct: 447 LIHGLC 452
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 177/422 (41%), Gaps = 8/422 (1%)
Query: 138 AFSVFNEV-KFNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
A S +N + + +++ P++C L+ G +D + +G I F
Sbjct: 68 AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP 127
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-- 252
+ C + + + ++ R E I +++ G C R +EA ++L +
Sbjct: 128 LLKGLCADKRTSDAMDIVLR-RMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMAD 186
Query: 253 -RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
R PD ++Y V F G + + G+ P Y I L +
Sbjct: 187 DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQA 246
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
+ +A E+ +V D N+++ G SS P+ AI F M G P + T S
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LCK + E +++ ++ ++ +Y ++ T G L E +G++ M R G
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+ PD ++ L+ A + + A ++ +M G + N TY +I + G +E A+
Sbjct: 367 IHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
F M+++G++P Y SL+ GLC + A E+ + ++ + L ++ + S
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH 486
Query: 551 CR 552
C+
Sbjct: 487 CK 488
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 97/486 (19%), Positives = 210/486 (43%), Gaps = 20/486 (4%)
Query: 58 PYLLTHHSLALGFFNWASQQPNFT--HSPL---------SYHSILKSLSLSRQINAIDSV 106
P ++++ ++ GFF ++ H L +Y+SI+ +L ++ ++ V
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEV 253
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS--LLAVL 164
L + N + D Y I+ ++A K + + P++ L+ L
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLK--KMRSDGVEPDVVTYSLLMDYL 311
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
+G A K+FD M+ RG++ +G + + L ++ +LD + + N +
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR--NGIHP 369
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+ ++I + +V++A V ++R + P+ + Y V G V + +
Sbjct: 370 DHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 429
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
++ G++P Y I GL + A+EL ++ ++ N++I S
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK- 488
Query: 345 DPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
+ R + F M+ G P + T + L C K DE +++ + + + +
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y+ +++ C R+ +A + +EM+ G+ PD+ YN +++ + AK+L+ ++
Sbjct: 549 YSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 608
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
SG L TYNI++ + + AL++F N+ + +A T+ +++ L +
Sbjct: 609 ESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRND 668
Query: 523 AAFEVF 528
A ++F
Sbjct: 669 EAKDLF 674
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 193/454 (42%), Gaps = 21/454 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+SIL S Q LK+++ + + D Y ++ L + +A +F+
Sbjct: 267 MTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDS 326
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ + PEI +LL A+ G + + D M G+ F + I +
Sbjct: 327 MTK--RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQ 384
Query: 203 AKLGQVLSMLDEVRKR---ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
K+ Q + + ++R++ N++ G+VI +L CK RVE+A +++ P
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL-----CKSGRVEDAMLYFEQMIDEGLSP 439
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
I Y + E ++ + G+ T + I E R+ E+++L
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499
Query: 320 EVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
E++V + N LI G + A+ + M+ G P T S L CK
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKI 559
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
++ ++ + ++K + ++ D+ +YN+++ L + R A + + G ++S Y
Sbjct: 560 SRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY 619
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLK----TYNILISKFSEVGEIEGALRLFH 494
N ++ C+ L A QMF + C +LK T+NI+I +VG + A LF
Sbjct: 620 NIILHGLCKNKLTDDAL----QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV 675
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
G+ P+ TY + E + + L+ ++F
Sbjct: 676 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLF 709
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 187/434 (43%), Gaps = 8/434 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++L+ + + + +L + N I D V+ +I + +A VF+++
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKM 397
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + +++ +L G +++A+ F++M G+ I + I C K
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR-ECKPDFIAY 264
+ ++ E+ R + ++ II CK RV E+ K+ EL +R KP+ I Y
Sbjct: 458 ERAEELILEMLDR--GICLNTIFFNSIIDSHCKEGRVIESEKLF-ELMVRIGVKPNVITY 514
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + L G + E +L +G+ P T Y I G R+ +A L + + S
Sbjct: 515 NTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMES 574
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ D N ++ G + +A + + E G LST + + LCK +D+
Sbjct: 575 SGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDD 634
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+++++ L D + ++N+M+ L GR EA + GL P+ Y + E
Sbjct: 635 ALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 694
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+ LL +L+ M +GC+ + N ++ + + GEI A + EK +
Sbjct: 695 NIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSL 754
Query: 504 DATT---YTSLLEG 514
+A+T + LL G
Sbjct: 755 EASTASLFIDLLSG 768
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 119/531 (22%), Positives = 219/531 (41%), Gaps = 43/531 (8%)
Query: 66 LALGFFNWASQ-QPNFTHSPLSYHSILKSLSLSRQI-NAIDSVLKQVKVNKITLDSSVYR 123
L LGF + + F +++ +LK L ++ +A+D VL+++ + Y
Sbjct: 103 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYN 162
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLAS---DGYIDNALKMFDEM 180
++ L +Q+A + + + + P S V+ +G D A + EM
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
RG+ + + I C+ + + + +L+ + K N ++ + I+HG+C
Sbjct: 223 LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK--NGVMPDCMTYNSILHGYCSSG 280
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+ +EA L ++R +PD + Y ++ + G E + K G+ P Y
Sbjct: 281 QPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYG 340
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---------------------- 338
+ G + + E L +++V D V + LI
Sbjct: 341 TLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 400
Query: 339 ---------GSVSSIDPRS-----AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
G+V I +S A+++F MI++G P ++L LC NK +
Sbjct: 401 GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 460
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
E+ + + +N ++ C GR+ E+ + + M R G+ P+V YN+L+
Sbjct: 461 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLING 520
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C + A KL M + G N TY+ LI+ + ++ +E AL LF M GV+PD
Sbjct: 521 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPD 580
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
TY +L+GL Q AA E++ + + S + + LC+ L
Sbjct: 581 IITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKL 631
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 178/422 (42%), Gaps = 8/422 (1%)
Query: 138 AFSVFNEV-KFNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
A S +N + + +++ P++C L+ G +D + +G I F
Sbjct: 68 AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP 127
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-- 252
+ C + + + ++ R E I +++ G C R +EA ++L +
Sbjct: 128 LLKGLCADKRTSDAMDIVLR-RMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMAD 186
Query: 253 -RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
R PD ++Y V F G + + G+ P Y I L +
Sbjct: 187 DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQA 246
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
+ +A E+ +V D N+++ G SS P+ AI F M G P + T S
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LCK + E +++ ++ ++ +Y ++ T G L E +G++ M R G
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+ PD ++ L+ A ++ + A ++ +M G + N TY +I + G +E A+
Sbjct: 367 IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
F M+++G++P Y SL+ GLC + A E+ + ++ + L ++ + S
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH 486
Query: 551 CR 552
C+
Sbjct: 487 CK 488
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 184/426 (43%), Gaps = 50/426 (11%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
++A +FDE+ RG S G + ++ V R + +
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER------EVVL 284
++I C+ R++ F L + + + D IA+ + L G ++ ++VL
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPL-----LKGLCADKRTSDAMDIVL 146
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS--GKFTIDDDVLNALI--GS 340
++ +LG P Y + GL E R EA EL ++ G + D V + G
Sbjct: 147 RRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGF 206
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
D A ++ M+++G +P + T +++ LCK D+ +EV + N D
Sbjct: 207 FKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDC 266
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+YN ++ C+SG+ +EA G +++M+ G++PDV Y+ LM+ C+ A+K++D
Sbjct: 267 MTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDS 326
Query: 461 MFASGCSGNLKTY-----------------------------------NILISKFSEVGE 485
M G + TY +ILI +++ G+
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK 386
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
++ A+ +F M ++G+ P+A TY +++ LC+ ++ A F + ++ + + ++
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 546 FMISLC 551
+ LC
Sbjct: 447 LIHGLC 452
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/486 (20%), Positives = 211/486 (43%), Gaps = 20/486 (4%)
Query: 58 PYLLTHHSLALGFFNWASQQPNFT--HSPL---------SYHSILKSLSLSRQINAIDSV 106
P ++++ ++ GFF ++ H L +Y+SI+ +L ++ ++ V
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEV 253
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS--LLAVL 164
L + N + D Y I+ ++A K + + P++ L+ L
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLK--KMRSDGVEPDVVTYSLLMDYL 311
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
+G A K+FD M+ RG++ +G + + L ++ +LD + + N +
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR--NGIHP 369
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+ ++I + K +V++A V ++R + P+ + Y V G V + +
Sbjct: 370 DHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 429
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
++ G++P Y I GL + A+EL ++ ++ N++I S
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK- 488
Query: 345 DPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
+ R + F M+ G P + T + L C K DE +++ + + + +
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y+ +++ C R+ +A + +EM+ G+ PD+ YN +++ + AK+L+ ++
Sbjct: 549 YSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 608
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
SG L TYNI++ + + AL++F N+ + +A T+ +++ L +
Sbjct: 609 ESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRND 668
Query: 523 AAFEVF 528
A ++F
Sbjct: 669 EAKDLF 674
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 194/454 (42%), Gaps = 21/454 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+SIL S Q LK+++ + + D Y ++ L + +A +F+
Sbjct: 267 MTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDS 326
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ + PEI +LL A+ G + + D M G+ F + I + +
Sbjct: 327 MTK--RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384
Query: 203 AKLGQVLSMLDEVRKR---ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
K+ Q + + ++R++ N++ G+VI +L CK RVE+A +++ P
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL-----CKSGRVEDAMLYFEQMIDEGLSP 439
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
I Y + E ++ + G+ T + I E R+ E+++L
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499
Query: 320 EVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
E++V + N LI G + A+ + M+ G P T S L CK
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKI 559
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
++ ++ + ++K + ++ D+ +YN+++ L + R A + + G ++S Y
Sbjct: 560 SRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY 619
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLK----TYNILISKFSEVGEIEGALRLFH 494
N ++ C+ L A QMF + C +LK T+NI+I +VG + A LF
Sbjct: 620 NIILHGLCKNKLTDDAL----QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV 675
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
G+ P+ TY + E + + L+ ++F
Sbjct: 676 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLF 709
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 188/434 (43%), Gaps = 8/434 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++L+ + + + +L + N I D V+ +I + + +A VF+++
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + +++ +L G +++A+ F++M G+ I + I C K
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR-ECKPDFIAY 264
+ ++ E+ R + ++ II CK RV E+ K+ EL +R KP+ I Y
Sbjct: 458 ERAEELILEMLDR--GICLNTIFFNSIIDSHCKEGRVIESEKLF-ELMVRIGVKPNVITY 514
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + L G + E +L +G+ P T Y I G R+ +A L + + S
Sbjct: 515 NTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMES 574
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ D N ++ G + +A + + E G LST + + LCK +D+
Sbjct: 575 SGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDD 634
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+++++ L D + ++N+M+ L GR EA + GL P+ Y + E
Sbjct: 635 ALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 694
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+ LL +L+ M +GC+ + N ++ + + GEI A + EK +
Sbjct: 695 NIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSL 754
Query: 504 DATT---YTSLLEG 514
+A+T + LL G
Sbjct: 755 EASTASLFIDLLSG 768
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 211/484 (43%), Gaps = 21/484 (4%)
Query: 50 SLVARVINPY-----LLTHHSLALGFFNWA----SQQPNFTHSP--LSYHSILKSLSLSR 98
SL+A ++P LL H + G A S+ F SP ++Y+++L +
Sbjct: 199 SLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKG 258
Query: 99 QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEIC 157
+ ++L ++K I + Y ++ + + ++A V + F E P++
Sbjct: 259 MLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFE---PDLW 315
Query: 158 --NSLLAVLASDGYIDNALKMFDEMSHRG-VEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
N L A L G +D A K+ DEM G V + + + + + L++L+E
Sbjct: 316 TYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEE 375
Query: 215 VRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+R E + + V +I+ G C+ ++EEA L+ + PD I Y + +
Sbjct: 376 MR--EKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKA 433
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G+V + V++ + + G+ T + L E+R EA+EL F D+
Sbjct: 434 GNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSY 493
Query: 335 NALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
++ + P A+ ++ MI++ P++ST + L K L K E ++ L
Sbjct: 494 GTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELME 553
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
D +YN+++ C G L +A+ +M PDV N+LM C L
Sbjct: 554 MGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEK 613
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A KL++ G ++ TYN LI + +++ ALR F +M +G+ PD TY LL
Sbjct: 614 AMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLS 673
Query: 514 GLCQ 517
L +
Sbjct: 674 ALSE 677
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 170/401 (42%), Gaps = 14/401 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ S G + +AL +M G+ + + + C LG+ ++L R
Sbjct: 213 NLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLL--ARM 270
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ ++ ++ + + +++A V++ + +PD Y ++A G V
Sbjct: 271 KKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKV 330
Query: 278 FEREVVLKKKRKLG-VAPRTNDYREFILGLIVERRICEA----KELGEVIVSGKFTIDDD 332
E + + +LG V+P Y + +R +A +E+ E V +
Sbjct: 331 DEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNI 390
Query: 333 VLNALI--GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
++ L G + A+ M E+G P + T + L CK + +
Sbjct: 391 IVKGLCREGQL-----EEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDE 445
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ + D + N ++ LC R EA +++ ++G PD Y ++M A +E
Sbjct: 446 MVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYK 505
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
PA LWD+M + ++ TYN LI S +G++ A+ + ++E G+ PD TTY
Sbjct: 506 PEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNI 565
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
++ C+E +L+ AF+ NK V + +T M LC
Sbjct: 566 IIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLC 606
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 158/377 (41%), Gaps = 6/377 (1%)
Query: 150 EDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
E + P++ N+L+ G + A + DEM G++ T ++ C+ + +
Sbjct: 414 EGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEE 473
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
+L +R + V ++ + K + E A + DE+ R+ P Y +
Sbjct: 474 AEELLRAPPQR--GFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTL 531
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
+ MG + E L + ++G+ P Y I E + +A + +V F
Sbjct: 532 IKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSF 591
Query: 328 TIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
D N L+ + A+ F +EKG+ + T + L + LCK N D +
Sbjct: 592 KPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALR 651
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC- 445
+ + D+ +YNV++S L +GR EA ++ ++ G FY S+ +
Sbjct: 652 FFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVE 711
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
E P K + + + ++YN I + G+++ A + M++KG++ D
Sbjct: 712 AVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDN 771
Query: 506 TTYTSLLEGLCQETNLQ 522
+TY +L+EGL + Q
Sbjct: 772 STYITLMEGLIKRQKRQ 788
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
++N++V C+ G L +A + +M+ GL PD YN+L+ A CR+ +L A+ L +M
Sbjct: 211 TFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARM 270
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G TYN L+S ++ +G I+ A + M G PD TY L GLCQ +
Sbjct: 271 KKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKV 330
Query: 522 QAAFEV 527
AF++
Sbjct: 331 DEAFKL 336
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 4/191 (2%)
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
VL+AL S S+ P++++ F+ +I P T + L C + + + +
Sbjct: 178 VLSALARSPST-SPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQ 236
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D +YN +++ C G L EA ++ MK++G+ P + YN+L+ A R ++
Sbjct: 237 GFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIK 296
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG-VAPDATTYTSL 511
A + + M A G +L TYN+L + + G+++ A +L M + G V+PD TY +L
Sbjct: 297 QATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTL 356
Query: 512 LEGL--CQETN 520
++ CQ ++
Sbjct: 357 VDACFKCQRSS 367
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 118/508 (23%), Positives = 220/508 (43%), Gaps = 20/508 (3%)
Query: 32 PLLEQTLHQLG--LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHS 89
P LE L + G +R L +++R + +L FF WAS+QP + HS Y +
Sbjct: 92 PKLELALQESGVIMRSGLPERVLSRCGDA-----GNLGYRFFVWASKQPGYRHSYEVYKA 146
Query: 90 ILKSLSLSRQINAIDSVLKQV-KVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV-KF 147
++K+L RQ A+ ++++++ K N L V+ ++ + +KA V +E+ K+
Sbjct: 147 MIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKY 206
Query: 148 NCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
CE P+ + LL L +G + A +F++M R + F ++ +C K+
Sbjct: 207 GCE---PDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPNLRHFTSLLYGWCREGKI 262
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ +L V+ +E V+ ++ G+ + ++ +AF +L E++ C P+ ++
Sbjct: 263 MEAKHVL--VQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFT 320
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE-LGEVIVS 324
I+ + F + E + + + G Y I G +A E L ++I
Sbjct: 321 ILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQK 380
Query: 325 GKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
G L ++ + + M + G VP L+ + + + +CK E
Sbjct: 381 GHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEA 440
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL--DPDVSFYNSLM 442
V ++ + A +++Y +MV + G L EA +EM +GL P L
Sbjct: 441 VRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELT 500
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
A R + L AK +W M GC N+ + I I G ++ A +M++ +
Sbjct: 501 NALLRAEKLEMAKNMWSCMTTKGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLM 560
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNK 530
P T+ L+ GL + + Q A E+ K
Sbjct: 561 PQPDTFAKLMRGLKKLFHRQLAVEITEK 588
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 161/340 (47%), Gaps = 9/340 (2%)
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ G V ++++E+RK M+ V VL+ F + V++A +VLDE+ C+PD
Sbjct: 156 QFGAVWALIEEMRKENPYMLTPEVFIVLM-RRFASVRMVKKAVEVLDEMPKYGCEPDEYV 214
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+ + + GSV E + + R + P + + G E +I EAK + I
Sbjct: 215 FGCLLDALCKNGSVKEAASLFEDMR-VRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIK 273
Query: 324 SGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRV---PTLSTLSNLSKNLCKRN 379
F D V N L+G + R A F+ + E +V P ++ + L ++ CK
Sbjct: 274 EAGFEPDIVVYNNLLGGYAQAGKMRDA---FDLLAEMKKVNCGPNAASFTILIQSFCKTE 330
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K DE + ++ + + D+ +Y ++S C G +AY ++ +M +KG DP Y
Sbjct: 331 KMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYL 390
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+M A +++ L +L ++M GC +L YN +I ++G+++ A+RL+ M
Sbjct: 391 CIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAG 450
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
G+ P TY ++ G + L A + F + V ++ A
Sbjct: 451 GLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSA 490
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 93/190 (48%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P L ++L C+ K E V + + D+ YN ++ +G++R+A+ +
Sbjct: 244 PNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDL 303
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ EMK+ P+ + + L+++ C+ + + A +++ +M SGC ++ TY LIS F +
Sbjct: 304 LAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCK 363
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
G + A + +M++KG P +Y ++ ++ L+ E+ + + +I
Sbjct: 364 WGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNI 423
Query: 543 LSTFMISLCR 552
+T + +C+
Sbjct: 424 YNTMIRLVCK 433
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 178/423 (42%), Gaps = 41/423 (9%)
Query: 135 TQKAFSVFNEVKFNCED-IGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
++ A S FN + C D + P +C L+ G++++ F + G I
Sbjct: 68 SELAVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIA 127
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ C ++G+ + +L + R E + +V +++ G C KR EEA ++L
Sbjct: 128 INQLLKGLCHGKRVGEAMDVLLQ-RMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHM 186
Query: 252 L---RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
+ R C P+ ++Y IV F G V + + + G+ P Y I GL
Sbjct: 187 MADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGL-- 244
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTL 368
C+A+ L + F MI+ G P T
Sbjct: 245 ----CKAQ--------------------LFDRAEGV--------FQQMIDNGFKPNNYTY 272
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ L K E+V++ + +SA D +Y ++++LC +GR REA M R
Sbjct: 273 NCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIR 332
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
KG+ P VS Y L+ + L D M +G S + +NI S +++ G I+
Sbjct: 333 KGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDK 392
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
A+ +F+ M + G++P+ Y +L++ LC+ + A FN+ +N V + ++ +
Sbjct: 393 AMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVY 452
Query: 549 SLC 551
LC
Sbjct: 453 GLC 455
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 117/502 (23%), Positives = 203/502 (40%), Gaps = 68/502 (13%)
Query: 85 LSYHSILKSLSLSRQIN-AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
++ + +LK L +++ A+D +L+++ D+ Y ++ L K ++A + +
Sbjct: 126 IAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLH 185
Query: 144 EVKFNCEDIG----PEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
+ +D G P + + + + ++G +D +F EM RG+ + + I
Sbjct: 186 MMA---DDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVID 242
Query: 198 KFCENAKL-----GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
C+ A+L G M+D K N N +IHG+ + +E ++L+E+
Sbjct: 243 GLCK-AQLFDRAEGVFQQMIDNGFKPNNYTYN------CLIHGYLSIGKWKEVVQMLEEM 295
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
R KPD Y + G E + G+ P+ + Y I G + +
Sbjct: 296 SARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGAL 355
Query: 313 CEAKELGEVIVSGKFTIDDDVLN-----------------------------------AL 337
E +++V + D + N AL
Sbjct: 356 SEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGAL 415
Query: 338 IGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE-VYKVLS--- 392
I ++ + A V FN MI +G P + ++L LC +K + E VY++L
Sbjct: 416 IDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGI 475
Query: 393 -ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
N F +N ++ LC GR+ E +I M+ G+ PD Y L+ C
Sbjct: 476 CPNAVF-----FNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRT 530
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A+K++D M + G S TYN L+ + I+ A LF ML KGV P TY ++
Sbjct: 531 DEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTI 590
Query: 512 LEGLCQETNLQAAFEVFNKSVN 533
L GL Q A E++ +N
Sbjct: 591 LHGLFQTKRFSEAKELYLNMIN 612
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 187/447 (41%), Gaps = 7/447 (1%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY ++ Q++ ++ ++ I D Y +I L + + +A VF +
Sbjct: 200 VSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQ 259
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ N N L+ S G ++M +EMS RG++ +G + C+N +
Sbjct: 260 MIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGR 319
Query: 205 LGQVLSMLDE-VRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ D +RK ++ I +IHG+ + E LD + PD
Sbjct: 320 CREARFFFDSMIRKGIKPKVSTYGI---LIHGYATKGALSEMHSFLDLMVENGLSPDHHI 376
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+ I + G + + + K R+ G++P +Y I L R+ +A+ ++
Sbjct: 377 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI 436
Query: 324 SGKFTIDDDVLNALIGSVSSIDP--RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
+ T + V N+L+ + ++D R+ + + M+++G P + L NLC +
Sbjct: 437 NEGVTPNIVVFNSLVYGLCTVDKWERAEELVYE-MLDQGICPNAVFFNTLICNLCNVGRV 495
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
E + ++ D SY ++S C +GR EA V M GL P YN+L
Sbjct: 496 MEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTL 555
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ C + A L+ +M G + + TYN ++ + A L+ NM+ G
Sbjct: 556 LHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT 615
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVF 528
D TY +L GLC+ + AF++F
Sbjct: 616 KCDIYTYNIILNGLCKSNCVDEAFKMF 642
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/453 (20%), Positives = 199/453 (43%), Gaps = 19/453 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++ L ++ + + V +Q+ N ++ Y +I + ++ + E
Sbjct: 235 VTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEE 294
Query: 145 -----VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+K +C G SLL L +G A FD M +G++ +G+ I +
Sbjct: 295 MSARGLKPDCYTYG-----SLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGY 349
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
L ++ S LD + EN + I + + K +++A + +++R P
Sbjct: 350 ATKGALSEMHSFLDLMV--ENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSP 407
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
+ + Y + + +G V + EV + GV P + + GL + A+EL
Sbjct: 408 NVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELV 467
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSI----DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
++ + N LI ++ ++ + R I + M G P + + L
Sbjct: 468 YEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLI---DLMEHVGVRPDAFSYTPLISGY 524
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C ++DE +V+ + + +YN ++ C++ R+ +AY + +EM RKG+ P V
Sbjct: 525 CLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGV 584
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YN+++ + AK+L+ M SG ++ TYNI+++ + ++ A ++F +
Sbjct: 585 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQS 644
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ KG+ + T+T ++ L + + A ++F
Sbjct: 645 LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLF 677
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 191/430 (44%), Gaps = 23/430 (5%)
Query: 117 LDSSVYRFIIPS------LIQGKNTQKAFSVFNE-VKFNCED-IGPE--ICNSLLAVLAS 166
DS + + I P LI G T+ A S + + E+ + P+ I N + A
Sbjct: 327 FDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAK 386
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
G ID A+ +F++M G+ + + +G I C KLG+V D+ + N MIN
Sbjct: 387 CGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALC---KLGRV----DDAEVKFNQMINEG 439
Query: 227 VIAVLII-----HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
V +++ +G C + E A +++ E+ + P+ + + + +G V E
Sbjct: 440 VTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGR 499
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GS 340
++ +GV P Y I G + R EA+++ + +VS + + N L+ G
Sbjct: 500 RLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGY 559
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
S+ A F M+ KG P + T + + L + + E E+Y + + D+
Sbjct: 560 CSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDI 619
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+YN++++ LC S + EA+ + Q + KGL ++ + ++ A + A L+
Sbjct: 620 YTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAA 679
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
+ A+G N+ TY ++ E G +E LF M + G AP++ +L+ L +
Sbjct: 680 IPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGD 739
Query: 521 LQAAFEVFNK 530
+ A +K
Sbjct: 740 ISRAGAYLSK 749
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 79/446 (17%), Positives = 166/446 (37%), Gaps = 73/446 (16%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++ + ++ + S L + N ++ D ++ + + KA +FN++
Sbjct: 341 TYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKM 400
Query: 146 KFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ + + P + N +L+ L G +D+A F++M + GV + + F ++ C
Sbjct: 401 RQH--GLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVD 458
Query: 204 KLGQVLSMLDEVRKR---ENSMINGSVIAVL----------------------------- 231
K + ++ E+ + N++ ++I L
Sbjct: 459 KWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYT 518
Query: 232 -IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I G+C R +EA KV D + P + Y + + + + + ++ +
Sbjct: 519 PLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRK 578
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID----DDVLNAL--------- 337
GV P Y + GL +R EAKEL +++ D + +LN L
Sbjct: 579 GVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEA 638
Query: 338 ---IGSVSSIDPRSAIVFFNFMI--------------------EKGRVPTLSTLSNLSKN 374
S+ S + I+ F MI G VP + T +++N
Sbjct: 639 FKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAEN 698
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
L + +E ++ + N + + N +V L G + A + ++ + +
Sbjct: 699 LIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVE 758
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQ 460
S + LM ++ AK L ++
Sbjct: 759 ASTTSLLMSIFTSDEYQHHAKSLPEK 784
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 112/486 (23%), Positives = 206/486 (42%), Gaps = 36/486 (7%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S L++++++ LS ++ + +L Q+ ++ D Y +I + +N AF VF
Sbjct: 239 SLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVF 298
Query: 143 NE-VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ VK C D ++L+ L ++G +D AL M +EM +G+E + + + I C
Sbjct: 299 DRMVKEGC-DPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCA 357
Query: 202 NAKLGQVLSMLDEVRKR---------------------------------ENSMINGSVI 228
+ + ++ ++KR + ++ +V
Sbjct: 358 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVT 417
Query: 229 AVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+I+ C G R A K+ + + Y + + L G + + V+ +K
Sbjct: 418 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 477
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-R 347
K+G P Y I G + + + A L +++ D+ N L+ S
Sbjct: 478 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 537
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
SA +F M+E G P + + L K K D + + + + ++ESYN ++
Sbjct: 538 SASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVI 597
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+ L R EA + +M +GL P+V Y +L++ CR + A K++ M C
Sbjct: 598 NGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL 657
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
NL TY+ LI + G+ + A L M KG+APD T+TSL++G + AF +
Sbjct: 658 PNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLL 717
Query: 528 FNKSVN 533
+ V+
Sbjct: 718 LRRMVD 723
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 125/577 (21%), Positives = 228/577 (39%), Gaps = 86/577 (14%)
Query: 47 LSPSLVARVINPYLLTHHSL--ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAID 104
LSP L A + + H + FF W S++P + H+ + S+L L R D
Sbjct: 111 LSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPAD 170
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
+ ++ + K + R + L + FS+++ CN+LL L
Sbjct: 171 HI--RILMIKACRNEEEIRRVADFLNEISGMGFGFSLYS-------------CNTLLIQL 215
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK-------LGQVLS------- 210
A ++ A ++ +M + G++ S + F I + K L Q+
Sbjct: 216 AKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDV 275
Query: 211 ------MLDEVRKRENSMING-------------SVIAVLIIHGFCKGKRVEEAFKVLDE 251
+L R R + G SV +I+G C RV+EA +L+E
Sbjct: 276 FTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEE 335
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL----- 306
+ + +P Y + + E ++ + +K G P Y I GL
Sbjct: 336 MIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK 395
Query: 307 ---------------IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS--------- 342
+V + + E+ V G+F+ + + + G S
Sbjct: 396 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 455
Query: 343 -------SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
D A+V F M++ G +PT+ T + L + + + ++ N
Sbjct: 456 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 515
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D +YN +VS G+L A QEM GL+P+ Y +L++ ++ + A
Sbjct: 516 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIAL 575
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L ++M GC+ N+++YN +I+ S+ A ++ M E+G+ P+ TYT+L++GL
Sbjct: 576 SLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGL 635
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
C+ Q AF++F+ + S+ + LC+
Sbjct: 636 CRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ 672
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/473 (22%), Positives = 197/473 (41%), Gaps = 34/473 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++++ +N +L +K N D Y ++ + + A F E
Sbjct: 486 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 545
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + P +L+ + DG +D AL + + M G + + I + +
Sbjct: 546 MVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENR 605
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ + D++ E ++ + +I G C+ R + AFK+ ++ R+C P+ Y
Sbjct: 606 FSEAEKICDKMA--EQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTY 663
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA----KELGE 320
+ G E E++LK+ + G+AP + I G +V RI A + + +
Sbjct: 664 SSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVD 723
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRSAI---VFFNFMIEKGRVPTLSTLSNLSKNLCK 377
V + +L L ++ + A+ ++F + V +SNL + +
Sbjct: 724 VGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDV-NFEIVSNLLARMSE 782
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
L ++Y+ +VS LC GR EA ++++MK +G PD
Sbjct: 783 IGCEPTL----------------DTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREI 826
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
Y SL+ A C+ + A K++ + A G +L Y LI + G++E A LF NML
Sbjct: 827 YYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNML 886
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEV--------FNKSVNHDVMLARSI 542
EK D +T L++GL +E L ++ F ++ V+L R +
Sbjct: 887 EKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGREL 939
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/493 (20%), Positives = 199/493 (40%), Gaps = 29/493 (5%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +++ LS ++ + ++ + ++ Y +I L G A +F+ +
Sbjct: 382 TYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM 441
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + + N ++ L G I+ A+ +F++M G + + + I + +
Sbjct: 442 EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNV 501
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+LD ++ EN ++ GF K ++E A E+ P+ ++Y
Sbjct: 502 NNAARLLDLMK--ENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYT 559
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + G V +L++ ++G P Y I GL E R EA+++ + +
Sbjct: 560 TLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQ 619
Query: 326 KFTIDDDVLNALIGSVSSIDPRSAIVF--FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ LI + + R+ F F+ M ++ +P L T S+L LC+ K+DE
Sbjct: 620 GLLPNVITYTTLIDGLCR-NGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 678
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ K + D ++ ++ GR+ A+ +++ M G P+ Y+ L++
Sbjct: 679 AEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLK 738
Query: 444 ACCREDLL---------------RPAKK---------LWDQMFASGCSGNLKTYNILISK 479
+E LL P +K L +M GC L TY+ L+S
Sbjct: 739 GLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSG 798
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
G A +L +M E+G PD Y SLL C+ + A ++F+ L
Sbjct: 799 LCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLH 858
Query: 540 RSILSTFMISLCR 552
SI + +LC+
Sbjct: 859 LSIYRALICALCK 871
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 193/475 (40%), Gaps = 84/475 (17%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
L FF+W S + F+H S+ +L+ L +R +N V R +
Sbjct: 84 GLRFFDWVSNK-GFSHKEQSFFLMLEFLGRARNLN-------------------VARNFL 123
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVE 186
S+ + N C + NSL+ + G ++K+F M G+
Sbjct: 124 FSIERRSN-------------GCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGIS 170
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
S + F + + + G + DE+R R + S +I+GFCK V+EAF
Sbjct: 171 PSVLTFNSLLSILLKRGRTGMAHDLFDEMR-RTYGVTPDSYTFNTLINGFCKNSMVDEAF 229
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK--KRKLGVAPRTNDYREFIL 304
++ ++ + C PD + Y + + G V VL K+ V P Y +
Sbjct: 230 RIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVR 289
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT 364
G C +E+ E A++ F+ M+ +G P
Sbjct: 290 G------YCMKQEIDE----------------------------AVLVFHDMLSRGLKPN 315
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT----DMESYNVMVSFLCTSGRLREAY 420
T + L K L + ++ DE+ ++ ++ ND FT D ++N+++ C +G L A
Sbjct: 316 AVTYNTLIKGLSEAHRYDEIKDI--LIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAM 373
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF-------ASGCSGNLKTY 473
V QEM L PD + Y+ L+ C + A+ L++++F C Y
Sbjct: 374 KVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAY 433
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N + G+ + A ++F ++++GV D +Y +L+ G C+E + A+E+
Sbjct: 434 NPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELL 487
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 39/220 (17%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P T + L CK + DE ++K + D+ +YN ++ LC +G+++ A
Sbjct: 204 GVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIA 263
Query: 420 YGVIQEMKRKGLD--PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+ V+ M +K D P+V Y +L+ C + + A ++ M + G N TYN LI
Sbjct: 264 HNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI 323
Query: 478 SKFSEV-------------------------------------GEIEGALRLFHNMLEKG 500
SE G ++ A+++F ML
Sbjct: 324 KGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMK 383
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
+ PD+ +Y+ L+ LC A +FN+ +V+L +
Sbjct: 384 LHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGK 423
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 100/541 (18%), Positives = 204/541 (37%), Gaps = 54/541 (9%)
Query: 34 LEQTLHQLGLRDSLSPSLVARVINPYLLTHHSL------------ALGFFNWASQQPNFT 81
L QT+ Q+G I+P +LT +SL A F+ + T
Sbjct: 160 LFQTMKQMG-------------ISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVT 206
Query: 82 HSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSV 141
++++++ + ++ + K +++ D Y II L + + A +V
Sbjct: 207 PDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNV 266
Query: 142 FNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+ + D+ P + + +L+ ID A+ +F +M RG++ + + + I
Sbjct: 267 LSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGL 326
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
E + ++ +L + + ++I C ++ A KV E+ + P
Sbjct: 327 SEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHP 386
Query: 260 DFIAYRIVAE------EFK----LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
D +Y ++ EF L +FE+EV+L K +A N E+ L
Sbjct: 387 DSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEY---LCAN 443
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
+ +A+++ ++ + G + A M+ + VP L T
Sbjct: 444 GKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYE 503
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK-- 427
L L K ++ + + + + Y +++ +++ L E++ ++ M
Sbjct: 504 LLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEK 563
Query: 428 --RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
R+ +D L + +E + L+D +G L L+ E +
Sbjct: 564 RIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYD-------NGYLVKMEELLGYLCENRK 616
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV---NHDVMLARSI 542
+ A L LEK D T +++EGLC+ AF ++N+ V NH + +
Sbjct: 617 LLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVV 676
Query: 543 L 543
L
Sbjct: 677 L 677
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 95/475 (20%), Positives = 184/475 (38%), Gaps = 101/475 (21%)
Query: 64 HSLALGFFNWASQ-QPNFTHSPLSYHSILKSLSLSRQINAI-----DSVLKQVKVNKITL 117
H++ G A+ PN +SY ++++ + ++I+ D + + +K N +T
Sbjct: 264 HNVLSGMLKKATDVHPNV----VSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTY 319
Query: 118 D------SSVYRFI-IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDG 168
+ S +R+ I ++ G N AF+ F P+ C N L+ G
Sbjct: 320 NTLIKGLSEAHRYDEIKDILIGGN--DAFTTF----------APDACTFNILIKAHCDAG 367
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVI 228
++D A+K+F EM + + + + V I C + + ++ +E+ ++E
Sbjct: 368 HLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKE--------- 418
Query: 229 AVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
VL+ GK ECKP AY + E G + E V ++
Sbjct: 419 -VLL------GKD--------------ECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLM 457
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPR 347
K GV + Y+ I G E + A EL +++ +F D + LI + I +
Sbjct: 458 KRGVQDPPS-YKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEAL 516
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE-------LVE-------------- 386
A M+ +P +T ++ L KR ++E ++E
Sbjct: 517 LAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVV 576
Query: 387 --------------VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
+ ++L N Y ME ++ +LC + +L +A+ ++ K
Sbjct: 577 RLLFSSAQKEKAFLIVRLLYDNGYLVKMEE---LLGYLCENRKLLDAHTLVLFCLEKSQM 633
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
D+ N+++E C+ A L++++ G L + +L + G+ E
Sbjct: 634 VDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWE 688
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 175/371 (47%), Gaps = 8/371 (2%)
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLII 233
+ + D M +G + + +GV + C+ ++L+++ + + G +I II
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME--QGKLEPGVLIYNTII 58
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
G CK K +++A + E+ + +P+ + Y + G + +L + +
Sbjct: 59 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 118
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSSIDP-RSAI 350
P + I + E ++ EA++L + +V K +ID ++ ++LI D A
Sbjct: 119 PDVFTFSALIDAFVKEGKLVEAEKLYDEMV--KRSIDPSIVTYSSLINGFCMHDRLDEAK 176
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
F FM+ K P + T + L K CK + +E +EV++ +S + +YN+++ L
Sbjct: 177 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 236
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
+G A + +EM G+ P++ YN+L++ C+ L A +++ + S +
Sbjct: 237 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 296
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TYNI+I + G++E LF N+ KGV PD Y +++ G C++ + + A +F K
Sbjct: 297 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF-K 355
Query: 531 SVNHDVMLARS 541
+ D L S
Sbjct: 356 EMKEDGTLPNS 366
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 179/410 (43%), Gaps = 6/410 (1%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMF 177
D Y ++ L + +T AF++ N+++ + G I N+++ L ++D+AL +F
Sbjct: 15 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 74
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGF 236
EM +G+ + + + I C + +L ++ +R+ IN V +I F
Sbjct: 75 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK---INPDVFTFSALIDAF 131
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
K ++ EA K+ DE+ R P + Y + F + + E + + + P
Sbjct: 132 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV 191
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNF 355
Y I G +R+ E E+ + + N LI G + D A F
Sbjct: 192 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 251
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M+ G P + T + L LCK K ++ + V++ L + + +YN+M+ +C +G+
Sbjct: 252 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 311
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ + + + + KG+ PDV YN+++ CR+ A L+ +M G N YN
Sbjct: 312 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 371
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
LI G+ E + L M G A DA+T L+ + + L +F
Sbjct: 372 LIRARLRDGDREASAELIKEMRSCGFAGDAST-IGLVTNMLHDGRLDKSF 420
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 129/305 (42%), Gaps = 34/305 (11%)
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
++D + + C+PD + Y +V G +L K + + P Y I GL
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL- 61
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
C+ K + DD LN F M KG P + T
Sbjct: 62 -----CKYKHM------------DDALN----------------LFKEMETKGIRPNVVT 88
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
S+L LC + + + + D+ +++ ++ G+L EA + EM
Sbjct: 89 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 148
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
++ +DP + Y+SL+ C D L AK++++ M + C ++ TYN LI F + +E
Sbjct: 149 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 208
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
+ +F M ++G+ + TY L++GL Q + A E+F + V+ V +T +
Sbjct: 209 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 268
Query: 548 ISLCR 552
LC+
Sbjct: 269 DGLCK 273
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 162/420 (38%), Gaps = 84/420 (20%)
Query: 63 HHSLALGFFNWASQQ---PNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDS 119
H AL F + PN ++Y S++ L + + +L + KI D
Sbjct: 66 HMDDALNLFKEMETKGIRPNV----VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121
Query: 120 SVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKM 176
+ +I + ++ +A +++E VK I P I +SL+ +D A +M
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVK---RSIDPSIVTYSSLINGFCMHDRLDEAKQM 178
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
F+ M + K C V++ N++I G F
Sbjct: 179 FEFM---------------VSKHC----FPDVVTY--------NTLIKG----------F 201
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
CK KRVEE +V E+ R + + Y I+ + G + + K+ GV P
Sbjct: 202 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 261
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFM 356
Y + GL C+ +L A+V F ++
Sbjct: 262 MTYNTLLDGL------CKNGKL----------------------------EKAMVVFEYL 287
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
PT+ T + + + +CK K ++ +++ LS D+ +YN M+S C G
Sbjct: 288 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 347
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
EA + +EMK G P+ YN+L+ A R+ + +L +M + G +G+ T ++
Sbjct: 348 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 407
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 185/412 (44%), Gaps = 40/412 (9%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L+ L + I A K+F M G + + +G I C + L E+
Sbjct: 166 TLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLND 225
Query: 219 ENSMI---NGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+ + +VI+ +II G CK EEA + +E+ + +P+ + + ++ +
Sbjct: 226 TSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKE 285
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G V + + +L+ ++G+ P Y I G + + AKEL + S + D
Sbjct: 286 GQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISY 345
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV--- 390
N LI G ++ A+ FN M+ G P + T L K L K D+ E+++V
Sbjct: 346 NMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKP 405
Query: 391 ----------------LSANDY-------FTDMESYNV---------MVSFLCTSGRLRE 418
L N Y F ++ESYN+ ++ LC +G+L
Sbjct: 406 YAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLET 465
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A+ + +++ +G+ PD Y+S++ C++ + A L+ +M +GCS +L TY+IL+
Sbjct: 466 AWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMR 525
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
F E ++E ++L H M+EK V PD Y + + +C++ + ++ +
Sbjct: 526 GFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQR 577
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 165/395 (41%), Gaps = 30/395 (7%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LLA LA + ++ +M G+ + + I C ++ + L+ + + +
Sbjct: 95 NRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMR 154
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R I V +I G C R+ EA K+ ++ C P+ + Y + + +G++
Sbjct: 155 R--GYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNI 212
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ LK +++ ND ++ C ++S ID
Sbjct: 213 ---NIALKWHQEM-----LNDTSPYVFN-------CRPN-----VISYSIIID------- 245
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
G + AI FN M+++G P + T S L LCK + + ++ +++
Sbjct: 246 -GLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIV 304
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
++ +Y ++ C G L A + M KG +PDV YN L+ C+ + A KL
Sbjct: 305 PNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKL 364
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+++M G ++KT +L+ G+++ A LF + + D L+GLC+
Sbjct: 365 FNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCK 424
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ A ++FN+ ++++ L + LC+
Sbjct: 425 NGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCK 459
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 149/348 (42%), Gaps = 11/348 (3%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDE 179
Y II L + N ++A +FNE+ + + P + + L+ +L +G + A K+ +
Sbjct: 240 YSIIIDGLCKVGNWEEAICLFNEMVD--QGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEM 297
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR--ENSMINGSVIAVLIIHGFC 237
M G+ + + I FC L + + + E +I+ + ++I+G+C
Sbjct: 298 MIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYN----MLINGYC 353
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K +VEEA K+ +E+ PD ++ + L G V + + + + + +
Sbjct: 354 KTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLC 413
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFM 356
F+ GL I EA +L + S +D + LI G + +A F +
Sbjct: 414 ICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKL 473
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
E+G P S++ CK+ + D+ +++ + N D+ +Y++++ S +L
Sbjct: 474 YEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKL 533
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
+ ++ M K + PD Y + + C+++ + L + F
Sbjct: 534 EKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRFFVQ 581
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 166/365 (45%), Gaps = 5/365 (1%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D+AL F+ M H ST+ F + AK+ ++L + ++ I V
Sbjct: 93 LDDALSSFNRMLHMHPPPSTVDFTKLLTSI---AKMKHYSTVLSLSTQMDSFGIPPDVYT 149
Query: 230 V-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+ ++I+ FC +R+ AF VL +L C+PD + + + G + E + K
Sbjct: 150 LNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 209
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPR 347
G P Y + GL A L +V + N +I S+
Sbjct: 210 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVT 269
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A F+ MI KG P + T ++L LC + + + + + ++ ++ +V
Sbjct: 270 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 329
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
LC G + A+ V+ M ++G++PDV Y +LM+ C + A K++D M GC
Sbjct: 330 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 389
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N+++YNILI+ + ++ ++ A+ L M +G+ D TY +L+ GLC LQ A +
Sbjct: 390 PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIAL 449
Query: 528 FNKSV 532
F++ V
Sbjct: 450 FHEMV 454
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 177/423 (41%), Gaps = 7/423 (1%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S + + +L S++ + + + S+ Q+ I D +I S + AFSV
Sbjct: 111 STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVL 170
Query: 143 NEV-KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
++ K C+ N+L+ L +G I AL +FD+ G + + +G + C
Sbjct: 171 AKLLKLGCQPDNTTF-NTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLC- 228
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
K+G + + +R +VIA II CK ++V EAF + E+ + PD
Sbjct: 229 --KVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPD 286
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
Y + + +L + + P + + L E I A ++ +
Sbjct: 287 IFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVD 346
Query: 321 VIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+++ D AL+ G + A+ F+ M+ KG VP + + + L C+
Sbjct: 347 MMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQ 406
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ D+ + + + +S D +YN ++ LC GRL+ A + EM G PD+ Y
Sbjct: 407 RMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYR 466
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
L++ C+ L A L + S ++ YNI I GE+E A LF N+ +
Sbjct: 467 ILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQ 526
Query: 500 GVA 502
G A
Sbjct: 527 GFA 529
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 1/221 (0%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEK-GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
L+ S++ + S ++ + ++ G P + TL+ L + C + V L
Sbjct: 118 LLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLG 177
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D ++N ++ LC G++ EA + + +G PDV Y +LM C+ A
Sbjct: 178 CQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAI 237
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L M C N+ YN +I + ++ A LF M+ KG++PD TY SL+ L
Sbjct: 238 RLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHAL 297
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
C + + N+ VN +M + ST + +LC+ +I
Sbjct: 298 CNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMI 338
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 102/207 (49%), Gaps = 5/207 (2%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ FN M+ P+ + L ++ K ++ + + + D+ + N++++
Sbjct: 96 ALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILIN 155
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C RL A+ V+ ++ + G PD + +N+L+ C E + A L+D+ G
Sbjct: 156 SFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQP 215
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TY L++ +VG A+RL +M++K P+ Y ++++ LC++ + AF +F
Sbjct: 216 DVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLF 275
Query: 529 N----KSVNHDVMLARSILSTFMISLC 551
+ K ++ D+ S++ + +LC
Sbjct: 276 SEMITKGISPDIFTYNSLIHA-LCNLC 301
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 108/245 (44%), Gaps = 38/245 (15%)
Query: 327 FTIDDDV--LNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
F I DV LN LI S + A +++ G P +T + L + LC K E
Sbjct: 141 FGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGE 200
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ ++ + D+ +Y +++ LC G A +++ M +K P+V YN++++
Sbjct: 201 ALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIID 260
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI----------------- 486
+ C++ + A L+ +M G S ++ TYN LI + E
Sbjct: 261 SLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMP 320
Query: 487 --------------EGALRLFHN----MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
EG + + H+ M+++GV PD TYT+L++G C + + A +VF
Sbjct: 321 NVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVF 380
Query: 529 NKSVN 533
+ V+
Sbjct: 381 DTMVH 385
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 142/353 (40%), Gaps = 40/353 (11%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
F ++Y +++ L +A +L+ + + Y II SL + + +AF
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272
Query: 140 SVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
++F+E+ + I P+I NSL+ L + + + +EM + + + + F +
Sbjct: 273 NLFSEMI--TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 330
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
C+ + ++D + KR + V ++ G C ++EA KV D + + C
Sbjct: 331 ALCKEGMIAIAHDVVDMMIKR--GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 388
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
P+ +Y I+ + + + + +L++ G+ T Y I GL C
Sbjct: 389 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL------CHVGR 442
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
L + AI F+ M+ G++P L T L LCK
Sbjct: 443 L----------------------------QHAIALFHEMVASGQIPDLVTYRILLDYLCK 474
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
+ E + + K + ++ D+ YN+ + +C +G L A + + +G
Sbjct: 475 NHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQG 527
>gi|414888175|tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea mays]
Length = 667
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/522 (22%), Positives = 222/522 (42%), Gaps = 18/522 (3%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINA 102
L L P +V RV+ ++ +A+ F+ WA +P F H+ + ++ L +
Sbjct: 87 LHVDLDPFVVNRVLRS--ISDSEMAVRFYWWAESRPGFDHTQFAIAYVVSLLFVDSNFFL 144
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEICNSLL 161
+ L++V+ + L S+YR ++ ++ F+E V C + G + N +
Sbjct: 145 LSEFLERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDY-NRFI 203
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
VL + D K + +G ++ + +I C++ ++ V +L ++ K
Sbjct: 204 GVLVKNCCFDLVEKYYSVALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKF--G 261
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
+ + CK R+ +A K L+ + IR PD + Y V E
Sbjct: 262 CFPDIWACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAV 321
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GS 340
+ ++ + G+ P I GL ++ EA EL ++S ++ + NALI G
Sbjct: 322 ELWEEMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGF 381
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN---KSDELVEVYKVLSANDYF 397
+ S A + M G P + T + + C ++++L+E ++ +
Sbjct: 382 LRSGSINKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVN-- 439
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D SYN M+ LC + +L A+G + + G D+ N L++A C+ + A KL
Sbjct: 440 PDRYSYNQMLKGLCKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKL 499
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ +M G + TY LI+ VG A +F ML+ V P+ Y +L LC+
Sbjct: 500 FKEMGYKGIQADAVTYGTLINGLYGVGYYYLAEEIFEQMLKARVVPNVNLYNIMLHNLCK 559
Query: 518 ETNLQAAFEVF----NKSVNHDVMLARSILSTFMISLCRRVL 555
+ A ++F K V+ D++ +++ + + C R +
Sbjct: 560 AGQFEQAQKIFLQMIQKEVSPDIITFNTLI--YWLGKCSRAI 599
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/465 (19%), Positives = 191/465 (41%), Gaps = 37/465 (7%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F + +Y + +L S +I ++ +L + D + L + A
Sbjct: 226 GFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPDIWACNIYVDCLCKHNRLHDA 285
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ + +++ L + A+++++EM RG++ + GV I+
Sbjct: 286 LKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACGVLIFG 345
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C++ K+ + + +R ++ I +I GF + + +AFK++ +R C+
Sbjct: 346 LCKSDKVDEAFEL--ALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRTNGCE 403
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA-PRTNDYREFILGLIVERRICEAKE 317
PD + Y I + G + E E ++++ G+ P Y + + GL C+A +
Sbjct: 404 PDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGL------CKAHQ 457
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
L A F + +E G + + + L CK
Sbjct: 458 LDR----------------------------AFGFVSDHMEVGGFCDIVSCNILIDAFCK 489
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
K ++++K + D +Y +++ L G A + ++M + + P+V+
Sbjct: 490 AKKVSSALKLFKEMGYKGIQADAVTYGTLINGLYGVGYYYLAEEIFEQMLKARVVPNVNL 549
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
YN ++ C+ A+K++ QM S ++ T+N LI + A+ LF +M
Sbjct: 550 YNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLIYWLGKCSRAIEAIDLFRDMT 609
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
+G+ PD+ T+ L+ GL +E A+EV+ + + ++L R +
Sbjct: 610 ARGIEPDSLTFRYLISGLLEEGKATQAYEVWEYMLENGIILDRDV 654
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 176/395 (44%), Gaps = 39/395 (9%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ G I+ AL++ D H V + + + C+ KL Q + +LD R+
Sbjct: 143 NVLINAYCKSGEIEEALRVLD---HTSVAPNAATYDAVLCSLCDRGKLKQAMQVLD--RQ 197
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ V ++I CK V +A K+ +E+R + CKPD + Y ++ + F G +
Sbjct: 198 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRL 257
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E + LKK P + I ++ R +C SG +D
Sbjct: 258 DEAIIFLKK------LPSYGCQSDVISHNMILRSLC----------SGGRWMD------- 294
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
A+ M+ KG P++ T + L LC++ + + V +++ + +
Sbjct: 295 -----------AMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHT 343
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
+ S+N ++ C + A ++ M +G PD+ YN L+ A C++ + A +
Sbjct: 344 PNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVI 403
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
Q+ + GCS +L +YN +I +VG+ E A+ L M KG+ PD T TS++ GL +
Sbjct: 404 LSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSR 463
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
E + A + F+ + I ++ M+ LC+
Sbjct: 464 EGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCK 498
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 177/406 (43%), Gaps = 15/406 (3%)
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN-EVKFNCEDIGPEI--CNS 159
I+ L+ + + +++ Y ++ SL ++A V + +++ C P++ C
Sbjct: 155 IEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCY---PDVVTCTV 211
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ + + A+K+F+EM +G + + + V I FC+ +L + + L +K
Sbjct: 212 LIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFL---KKLP 268
Query: 220 NSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+ VI+ +I+ C G R +A K+L + + C P + + I+ G +
Sbjct: 269 SYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLG 328
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
+ VL+ K G P + + I G + I A E E++VS D N L+
Sbjct: 329 KALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILL 388
Query: 339 GSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
++ +D A+V + + KG P+L + + + L K K++ VE+ + +
Sbjct: 389 TALCKDGKVD--DAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKG 446
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D+ + +V L G++ EA +K G+ P+ YNS+M C+ A
Sbjct: 447 LKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAI 506
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
M A+GC +Y LI + G E A +L + + +G+
Sbjct: 507 DFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGL 552
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 3/179 (1%)
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F +M KG++P + + L + CK ++ + +L + D SYNV+++ C
Sbjct: 91 FLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYC 150
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
SG + EA V+ + P+ + Y++++ + C L+ A ++ D+ S C ++
Sbjct: 151 KSGEIEEALRVLDHTS---VAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVV 207
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
T +LI + + A++LF+ M KG PD TY L++G C+E L A K
Sbjct: 208 TCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKK 266
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
+G L E ++ M KG PDV +L+ C+ + A ++ + SG + +
Sbjct: 82 NGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANS 141
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YN+LI+ + + GEIE ALR+ + VAP+A TY ++L LC L+ A +V ++ +
Sbjct: 142 YNVLINAYCKSGEIEEALRVLDHT---SVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQL 198
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 218/504 (43%), Gaps = 12/504 (2%)
Query: 32 PLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSIL 91
P LE L + G+ ++ L RV+N +L FF WAS+QP + HS Y +++
Sbjct: 73 PKLELALQESGV--AVRSGLTERVLNR-CGDAGNLGYRFFVWASKQPGYRHSYEVYKAMI 129
Query: 92 KSLSLSRQINAIDSVLKQVK-VNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV-KFNC 149
K L RQ A+ +++++++ N + V+ ++ + +KA V +E+ K+ C
Sbjct: 130 KILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPKYGC 189
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
E + LL L +G + A +F++M R + F ++ +C KL +
Sbjct: 190 EP-DEHVFGCLLDALCKNGSVKEAASLFEDMRIRFTP-TLKHFTSLLYGWCREGKLMEAK 247
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+L V+ RE V+ ++ G+ ++ +A+ +L E+R +EC+P+ +++ + +
Sbjct: 248 YVL--VQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQ 305
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFT 328
+ E V + + G Y I G +I + EL +I G
Sbjct: 306 ALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIP 365
Query: 329 IDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
L+ + + I M + G P L+ + + + CK + E V V+
Sbjct: 366 NPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVW 425
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL--DPDVSFYNSLMEACC 446
+ A ++++ +M+ + L EA +EM +GL P L+ +
Sbjct: 426 NEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLL 485
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
R + L +K +W + GC N+ + I I G ++ A +M++ GV P
Sbjct: 486 RAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPD 545
Query: 507 TYTSLLEGLCQETNLQAAFEVFNK 530
T+ L+ GL + N Q A E+ K
Sbjct: 546 TFAKLMRGLRKLYNRQIAAEITEK 569
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 162/343 (47%), Gaps = 9/343 (2%)
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ G V ++++E+R REN + V+++ F + V++A +VLDE+ C+PD
Sbjct: 137 QFGAVWALIEEMR-RENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHV 195
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+ + + GSV E + + R + P + + G E ++ EAK + I
Sbjct: 196 FGCLLDALCKNGSVKEAASLFEDMR-IRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIR 254
Query: 324 SGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
F D V N L+ G ++ A M K P + + + L + LC + K +
Sbjct: 255 EAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKME 314
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E + V+ + + D +Y ++S C G++ + Y ++ M ++G P+ Y +M
Sbjct: 315 EAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIM 374
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
A +++ L +L ++M GC+ +L YNI+I ++GEI+ +R+++ M G++
Sbjct: 375 AAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLS 434
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
P T+ ++ G + L A E F + M+ R +LS
Sbjct: 435 PGLDTFVIMIHGFLSQRCLVEACEFFKE------MVGRGLLSA 471
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/509 (23%), Positives = 216/509 (42%), Gaps = 42/509 (8%)
Query: 63 HHSLALGFFNWASQQPNF------------TH--------SPLSYHSILKSLSL-----S 97
H LAL F W +QP TH P + ILK LSL S
Sbjct: 49 HGKLALKFLKWVVKQPGLDTDHIVQLFCITTHILVRARMYDPARH--ILKELSLMSGKSS 106
Query: 98 RQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI- 156
A+ + + N D + ++ +IQ ++ + F + FN P +
Sbjct: 107 FVFGALMATYRLCNSNPSVFDILIRVYLREGMIQ--DSLEIFRLMGLYGFN-----PSVY 159
Query: 157 -CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
CN++L + + EM R + F + I C + ++
Sbjct: 160 TCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLM--- 216
Query: 216 RKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+K E S +++ ++H +CK R + A ++LD + ++ D Y ++ +
Sbjct: 217 QKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRS 276
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
+ ++L+ RK + P Y + G E ++ A++L +++ + +
Sbjct: 277 NRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTF 336
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
NALI G +S + + A+ F+ M KG + T + L LCK + D Y +
Sbjct: 337 NALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKR 396
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
N +Y M+ LC +G L EA ++ EM + G+DPD+ Y++L+ CR L+
Sbjct: 397 NGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKT 456
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
AK++ +++ G S N Y+ LI +G ++ +R++ M+ +G PD T+ L+
Sbjct: 457 AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVT 516
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSI 542
LC+ + A E F + + D +L ++
Sbjct: 517 SLCKAGKVAEA-EEFMRCMTSDGILPNAV 544
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/550 (18%), Positives = 219/550 (39%), Gaps = 58/550 (10%)
Query: 54 RVINPYLLTHHSLALGFFNWA---------SQQPNFTHSP--LSYHSILKSLSLSRQINA 102
R+I+P +T+++L GF N ++ F SP +++++++
Sbjct: 292 RMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKE 351
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLA 162
+ ++ + Y ++ L + A + +K N +G ++
Sbjct: 352 ALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
L +G++D A+ M +EMS G++ + + I FC +L ++ + R
Sbjct: 412 GLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIY-RVGLS 470
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
NG + + LI + C+ ++E ++ + + + PD + ++ G V E E
Sbjct: 471 PNGIIYSTLI-YNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEE 529
Query: 283 VLKKKRKLGVAPRT-------NDYRE-----------------------FILGLIVERRI 312
++ G+ P N Y F G ++ + +
Sbjct: 530 FMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL-KGL 588
Query: 313 CEAKELGEVIVSGKF---------TIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRV 362
C+ G +I + KF +D + N LI ++ S + A+ F M+++ +
Sbjct: 589 CKG---GHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSIL 645
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSA-NDYFTDMESYNVMVSFLCTSGRLREAYG 421
P T ++L LC++ K+ + K A + + Y V + +G+ + +
Sbjct: 646 PDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFY 705
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
Q+M + GL DV N++++ R + L +M NL TYNIL+ +S
Sbjct: 706 FRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYS 765
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
+ + + L+ +M+ G+ PD T S++ G+C+ L+ ++ + V + R
Sbjct: 766 KRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRH 825
Query: 542 ILSTFMISLC 551
+ + C
Sbjct: 826 TFNMLISKCC 835
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 98/197 (49%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M + G PT+ T + + CK+ + +E+ ++ D+ +YN+++ LC S R
Sbjct: 219 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNR 278
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ Y ++++M+++ + P+ YN+L+ E + A++L ++M G S N T+N
Sbjct: 279 SAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNA 338
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI G + AL++FH M KG+ +Y LL+GLC+ A + + +
Sbjct: 339 LIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 398
Query: 536 VMLARSILSTFMISLCR 552
V + R + + LC+
Sbjct: 399 VCVGRITYTGMIDGLCK 415
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/398 (20%), Positives = 161/398 (40%), Gaps = 18/398 (4%)
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
N V F+C L+ S G A +FDEM+ G + +G + C+
Sbjct: 542 NAVSFDC----------LINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L L ++ ++ +V+ +I CK +++A + E+ R PD
Sbjct: 592 GHLIAAEKFLKSLQNVPAAV--DTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSF 649
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLG-VAPRTNDYREFILGLIVERRICEAKELGEV 321
Y + G + K+ G + P Y F+ G+ + +
Sbjct: 650 TYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQ 709
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDP--RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+ T D NA+I S + ++ + F M + + P L+T + L KR
Sbjct: 710 MDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFE-MGNQNQGPNLTTYNILLHGYSKRK 768
Query: 380 KSDELVEVYKVLSANDYFTD-MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+Y+ + + D + Y++++ +C S L +++ +G++ D +
Sbjct: 769 HVSTSFMLYRSMILSGILPDKLTCYSIILG-ICESNMLEIGLKILKAFICRGVEVDRHTF 827
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
N L+ CC + A + + M + G S + T + ++S + + + + H M +
Sbjct: 828 NMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSK 887
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+G++P++ Y LL GLC+ +++ AF V + + H +
Sbjct: 888 QGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKI 925
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/409 (18%), Positives = 153/409 (37%), Gaps = 37/409 (9%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+CN+L+ + G +D A+ +F EM R + + + I C K + E
Sbjct: 615 MCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEA 674
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
R N ++ V+ + G K + + F ++ D + + + + MG
Sbjct: 675 EARGN-LVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMG 733
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVL 334
+ + +L + P Y + G + + + L +I+SG
Sbjct: 734 KIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCY 793
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+ ++G S + I +G T + L C + + ++ V+++
Sbjct: 794 SIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSL 853
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D + + +VS L + R +E+ V+ EM ++G+ P+ Y L+ CR ++ A
Sbjct: 854 GISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTA 913
Query: 455 KKLWDQMFASG-CSGN----------------------------------LKTYNILISK 479
+ ++M A C N + ++ L+
Sbjct: 914 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHL 973
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
F + G + AL L M G+ D +Y L+ GLC + ++ AFE+F
Sbjct: 974 FCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELF 1022
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 119/287 (41%), Gaps = 38/287 (13%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
C S++ + ++ LK+ RGVE F + I K C N ++ M++ +
Sbjct: 792 CYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMT 851
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
S+ + A++ + + R +E+ VL E+
Sbjct: 852 SLGISLDKNTCDAIVSV--LNRNHRFQESRMVLHEMS----------------------- 886
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
K G++P + Y + GL I A + E +++ K + +A
Sbjct: 887 ------------KQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESA 934
Query: 337 LIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
++ +++ A + M++ VPT+++ + L CK E +E+ V+S
Sbjct: 935 MVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCG 994
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
D+ SYNV+++ LC G + A+ + +EMKR G +V+ Y +L+
Sbjct: 995 LKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALV 1041
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 171/376 (45%), Gaps = 9/376 (2%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+ N L+ L G D+A ++ G + + +G +C +LG ++ +
Sbjct: 105 LANRLVRDLCRRGRPDDAERVVGAC---GPAATVVAYGALTDGYCRAGRLGDARRVVGGM 161
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ N+ +IH C+ +V +A VLD++ R C PD + Y I+ E
Sbjct: 162 PVQPNAYTYNP-----LIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGR 216
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ ++ R G P Y + G+ E + +A EL + S N
Sbjct: 217 GYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYN 276
Query: 336 ALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
++ + S + A M+ + P +T + + +LC++ + +++ + +S +
Sbjct: 277 TVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKH 336
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ +YN +++ LC + A G++ +MK G PD+ YN+L++ C A
Sbjct: 337 GCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDA 396
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++L D M +GC + T+N LI + G + A+ +F M +KG P++ TY++++ G
Sbjct: 397 EELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISG 456
Query: 515 LCQETNLQAAFEVFNK 530
L + T L A E+FN+
Sbjct: 457 LAKATKLDQALELFNE 472
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 179/393 (45%), Gaps = 12/393 (3%)
Query: 166 SDGY-----IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
+DGY + +A ++ M V+ + + I CE ++ LS+LD++ R
Sbjct: 142 TDGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCR-- 196
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
V +++ CKG+ +A +++D +R C P+ + Y ++ + G V +
Sbjct: 197 GCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDA 256
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+L+ G P T +Y + GL R +A EL ++ ++ N +I S
Sbjct: 257 LELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYS 316
Query: 341 VSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ + AI M + G + T + + LC++ D + + + + D
Sbjct: 317 LCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPD 376
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ +YN ++ LC++ + +A ++ M + G PD +N+L+ C++ L+ A +++
Sbjct: 377 IVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFK 436
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
QM GC+ N TY+ +IS ++ +++ AL LF+ M KG PD Y L E L +
Sbjct: 437 QMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDD 495
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++ A + K + + + + ++ LCR
Sbjct: 496 TIEEAIQTVRKLQDSGISPHTVLYNAILLGLCR 528
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 199/475 (41%), Gaps = 47/475 (9%)
Query: 77 QPN-FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
QPN +T++PL + +L Q+ SVL + D Y ++ + +G+
Sbjct: 164 QPNAYTYNPL-----IHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGY 218
Query: 136 QKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
++A + + ++ E P N L+ + +G +D+AL++ + G + ST+ +
Sbjct: 219 RQAMELIDLMRA--EGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYN 276
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
+ C + G ++ E+ REN N + V +I+ C+ +++A ++L+++
Sbjct: 277 TVLKGLCSAERWGDADELVTEML-RENCPPNEATFNV-VIYSLCRKGLLQQAIQLLEKMS 334
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
C + + Y + +V +L K + G P Y + GL +
Sbjct: 335 KHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWV 394
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+A+EL + M + G +P T + L
Sbjct: 395 DAEEL----------------------------------MDNMTQNGCLPDNVTFNTLIG 420
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
LC++ + +EV+K + + +Y+ ++S L + +L +A + EM KG +P
Sbjct: 421 FLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNP 480
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
D Y L E +D + A + ++ SG S + YN ++ G+ E A+ +
Sbjct: 481 D-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIM 539
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
M+ G PD TY L+EGL E L A E+ K + DV++ I S ++
Sbjct: 540 AYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSLIKSEALL 594
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 152/334 (45%), Gaps = 11/334 (3%)
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP--DFIAYRIVAEEFKLMGSVFEREVV 283
+ +A ++ C+ R ++A +V + C P +AY + + + G + + V
Sbjct: 103 AALANRLVRDLCRRGRPDDAERV-----VGACGPAATVVAYGALTDGYCRAGRLGDARRV 157
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVS 342
+ + V P Y I L ++ +A + + ++ D N L+ +
Sbjct: 158 VGG---MPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCK 214
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
R A+ + M +G P T + L +C D+ +E+ + L ++ +
Sbjct: 215 GRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVN 274
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN ++ LC++ R +A ++ EM R+ P+ + +N ++ + CR+ LL+ A +L ++M
Sbjct: 275 YNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS 334
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
GC+ N+ TYN +I+ E ++GA+ L M G PD TY +LL+GLC
Sbjct: 335 KHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWV 394
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
A E+ + + + +T + LC++ L+
Sbjct: 395 DAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLM 428
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 74/176 (42%), Gaps = 10/176 (5%)
Query: 100 INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS 159
++AI+ V KQ+ T +S Y II L + +A +FNE+ + P+
Sbjct: 429 VDAIE-VFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGH--KGFNPDKIYQ 485
Query: 160 LLA-VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
LLA L D I+ A++ ++ G+ T+ + + C N K + ++
Sbjct: 486 LLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIM--AYMV 543
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+ + + V++I G + EA EL I+ C D + ++ E L+
Sbjct: 544 SSGCMPDDLTYVILIEGLAYEGYLNEAR----ELLIKLCSRDVLVNSLIKSEALLL 595
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 201/470 (42%), Gaps = 49/470 (10%)
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN---TQKAFSVFNEVK 146
I+K S + + + +++ V + DS YR ++ + N K SV E
Sbjct: 176 IIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERG 235
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
F ++ + +++ + GY AL F + G+E + I F I C+ +
Sbjct: 236 FVVDNATFTL---IISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIK 292
Query: 207 QVLSMLDEVRKR---ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RIRECKPDFI 262
Q ML+E+ + N + S +I G CK E+AF++ +L R KP+ +
Sbjct: 293 QAFEMLEEMVGKGWKPNVYTHTS-----LIDGLCKKGWTEKAFRLFLKLVRSENHKPNVL 347
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + + E++L + ++ G+ P TN Y I G C+A
Sbjct: 348 TYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGH------CKA------- 394
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
G F D++N M +G P L T + + LCKR +
Sbjct: 395 --GNFERAYDLMN-------------------LMSSEGFSPNLCTYNAIVNGLCKRGRVQ 433
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E ++ + N D +YN+++S C +R+A + +M + G+ PD+ Y +L+
Sbjct: 434 EAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLI 493
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
CRE+ ++ ++ +++ G KTY +I + G + A++ FH + + G A
Sbjct: 494 AVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCA 553
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
PD+ TY +++ GLC+++ A +++ + ++ T C+
Sbjct: 554 PDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 214/495 (43%), Gaps = 29/495 (5%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
+ L FF+WA P F H Y I+ ++SL N+ + V R +
Sbjct: 97 VTLSFFHWAIGYPKFRHFMRLY--IVCAMSLIGNRNSEKAC-------------EVMRCM 141
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
+ S + ++A + E+ N ++ V + G ++ A +F+EM RGV
Sbjct: 142 VESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGV 201
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA-----VLIIHGFCKGK 240
+ +I + V + +C K+G +L E K + M+ + LII F
Sbjct: 202 QPDSISYRVMVVMYC---KIGNIL----EADKWLSVMLERGFVVDNATFTLIISRFSGKG 254
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
A L +P+ I + + E GS+ + +L++ G P +
Sbjct: 255 YTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHT 314
Query: 301 EFILGLIVERRICEAKELG-EVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIE 358
I GL + +A L +++ S + A+I D A + + M E
Sbjct: 315 SLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKE 374
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
+G VP +T + L CK + ++ ++S+ + ++ +YN +V+ LC GR++E
Sbjct: 375 QGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQE 434
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
AY ++++ + GL PD YN LM C+++ +R A L+++M G ++ +Y LI+
Sbjct: 435 AYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIA 494
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
F ++ + F + G+ P TYTS++ G C+E NL A + F++ +H
Sbjct: 495 VFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAP 554
Query: 539 ARSILSTFMISLCRR 553
+ LC++
Sbjct: 555 DSITYGAIISGLCKQ 569
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 218/504 (43%), Gaps = 12/504 (2%)
Query: 32 PLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSIL 91
P LE L + G+ ++ L RV+N +L FF WAS+QP + HS Y +++
Sbjct: 106 PKLELALQESGV--AVRSGLTERVLN-RCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMI 162
Query: 92 KSLSLSRQINAIDSVLKQVK-VNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV-KFNC 149
K L RQ A+ +++++++ N + V+ ++ + +KA V +E+ K+ C
Sbjct: 163 KILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPKYGC 222
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
E + LL L +G + A +F++M R + F ++ +C KL +
Sbjct: 223 EP-DEHVFGCLLDALCKNGSVKEAASLFEDMRIRFTP-TLKHFTSLLYGWCREGKLMEAK 280
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+L V+ RE V+ ++ G+ ++ +A+ +L E+R +EC+P+ +++ + +
Sbjct: 281 YVL--VQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQ 338
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFT 328
+ E V + + G Y I G +I + EL +I G
Sbjct: 339 ALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIP 398
Query: 329 IDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
L+ + + I M + G P L+ + + + CK + E V V+
Sbjct: 399 NPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVW 458
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL--DPDVSFYNSLMEACC 446
+ A ++++ +M+ + L EA +EM +GL P L+ +
Sbjct: 459 NEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLL 518
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
R + L +K +W + GC N+ + I I G ++ A +M++ GV P
Sbjct: 519 RAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPD 578
Query: 507 TYTSLLEGLCQETNLQAAFEVFNK 530
T+ L+ GL + N Q A E+ K
Sbjct: 579 TFAKLMRGLRKLYNRQIAAEITEK 602
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 160/337 (47%), Gaps = 3/337 (0%)
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ G V ++++E+R REN + V+++ F + V++A +VLDE+ C+PD
Sbjct: 170 QFGAVWALIEEMR-RENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHV 228
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+ + + GSV E + + R + P + + G E ++ EAK + I
Sbjct: 229 FGCLLDALCKNGSVKEAASLFEDMR-IRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIR 287
Query: 324 SGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
F D V N L+ G ++ A M K P + + + L + LC + K +
Sbjct: 288 EAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKME 347
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E + V+ + + D +Y ++S C G++ + Y ++ M ++G P+ Y +M
Sbjct: 348 EAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIM 407
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
A +++ L +L ++M GC+ +L YNI+I ++GEI+ +R+++ M G++
Sbjct: 408 AAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLS 467
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
P T+ ++ G + L A E F + V ++ A
Sbjct: 468 PGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSA 504
>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 209/457 (45%), Gaps = 13/457 (2%)
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE---ICNSL 160
D+++ V+ K+ ++ V F++ L++G A S+F+++K + GP S+
Sbjct: 161 DALVTYVEAKKVGVELQVCNFLLKRLVEGNQIMYARSLFDDMKSS----GPSPNVYSYSV 216
Query: 161 LAVLASDG---YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
L + + G ++ AL++ EM GV + + +++ C ++ + L + +
Sbjct: 217 LMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQ 276
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R N AV IHGFC +V +A +V D ++ PD +Y I+ + G V
Sbjct: 277 RGYPCNNYCFNAV--IHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDV 334
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+L + + G+ P Y + GL R+ A EL + + F D V + +
Sbjct: 335 LTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIV 394
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ G +D +N M+ VP S+L C+ + E +EV++++ ++
Sbjct: 395 LHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGI 454
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ + ++V G + EA+ + ++++ G+ P + Y ++ C+ +
Sbjct: 455 CPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWG 514
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
++ M G + Y+I+I F + +++ A RL++ M+++G P+ TYTSL+ GLC
Sbjct: 515 IFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLC 574
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ L +F + + R + ++ + C+R
Sbjct: 575 HDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKR 611
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/435 (20%), Positives = 199/435 (45%), Gaps = 13/435 (2%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
Q + + +++++ Q++ V +K D Y ++ L + +
Sbjct: 276 QRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVL 335
Query: 137 KAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+ + E+ N I P + + SLL L G ++ A ++F + +G + I + +
Sbjct: 336 TGYYMLVEMARN--GITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSI 393
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
+ C++ L + +++ ++ + + +I+ +C+ ++++EA +V + +
Sbjct: 394 VLHGCCQHLDLEICYDLWNDMV--HHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVS 451
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
P+ + I+ F G + E + L K R+ GV P YR I GL ++ +
Sbjct: 452 DGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLC---KVNK 508
Query: 315 AKELGEVIVS--GKFTIDDDVLNALI--GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
++ + + + D VL ++I G V ++D + A + M+++G P + T ++
Sbjct: 509 PNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTS 568
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LC +K E++ ++K + D Y +++ C ++ A + +EM+ +G
Sbjct: 569 LINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEG 628
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L D Y L+ + + A+ ++M G + + TY LI + ++G+ + A+
Sbjct: 629 LSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAM 688
Query: 491 RLFHNMLEKGVAPDA 505
++++ML+ G+APDA
Sbjct: 689 AMYNSMLQAGIAPDA 703
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 183/422 (43%), Gaps = 19/422 (4%)
Query: 112 VNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGP--EIC-NSLLAVLASDG 168
V + +++ Y + L K + A+ N ++ C+ P C N+++ DG
Sbjct: 241 VEGVRPNAATYATYLYGLCHAKQVKSAW---NFLQMLCQRGYPCNNYCFNAVIHGFCHDG 297
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVI 228
+ A+++FD M G + + + C+ + ML E+ + N + V
Sbjct: 298 QVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMAR--NGITPNLVS 355
Query: 229 AVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV--FEREVVLKK 286
++HG C+ RVE AF++ L+ + K D I Y IV L G + E+
Sbjct: 356 YSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIV-----LHGCCQHLDLEICYDL 410
Query: 287 KRKL---GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
+ P +Y I R++ EA E+ E++VS + L+ S+
Sbjct: 411 WNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSN 470
Query: 344 ID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
A +F + + + G VP+L T + LCK NK +++ ++ + Y D
Sbjct: 471 EGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVL 530
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y++++ + L+EA+ + +M +G P++ Y SL+ C +D L L+ M
Sbjct: 531 YSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMI 590
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G + + Y LI+ + + ++ AL +F M +G++ D+ YT L+ G + +
Sbjct: 591 GEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMD 650
Query: 523 AA 524
A
Sbjct: 651 GA 652
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/524 (21%), Positives = 225/524 (42%), Gaps = 53/524 (10%)
Query: 30 WTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHS 89
W P E TL L + P V V+ L + A+ +F W ++ H P SY+S
Sbjct: 48 WGPSAENTLSALSFKPQ--PEFVIGVLRR--LKDVNRAIEYFRWYERRTELPHCPESYNS 103
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
+L ++ R +A+D +L ++ V + ++ ++ ++ + V ++
Sbjct: 104 LLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFK 163
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+L+ ++ + D L +F +M G E + F I F + ++ L
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR---- 265
S+LDE+ + +S+ V+ + I F K +V+ A+K E+ KPD + Y
Sbjct: 224 SLLDEM--KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIG 281
Query: 266 IVAEEFKLMGSV--FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
++ + +L +V FE L+K R++ P T Y I+G
Sbjct: 282 VLCKANRLDEAVEMFEH---LEKNRRV---PCTYAYNTMIMGY----------------- 318
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
GS D A KG +P++ + + L K K DE
Sbjct: 319 ---------------GSAGKFD--EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
++V++ + D ++ +YN+++ LC +G+L A+ + M++ GL P+V N +++
Sbjct: 362 ALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C+ L A ++++M C+ + T+ LI +VG ++ A +++ ML+
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
++ YTSL++ + +++ +N + +L+T+M
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYM 524
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 199/448 (44%), Gaps = 10/448 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y S++ L + +++ + + ++ N+ + Y +I +A+S+
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV-EFSTIGFGVFIWKFCENA 203
+ N +L L G +D ALK+F+EM ST + + I C
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLST--YNILIDMLCRAG 391
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
KL + D ++K + +++ CK ++++EA + +E+ + C PD I
Sbjct: 392 KLDTAFELRDSMQKA--GLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEIT 449
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND--YREFILGLIVERRICEAKELGEV 321
+ + + +G V + V +K L RTN Y I R + ++ +
Sbjct: 450 FCSLIDGLGKVGRVDDAYKVYEKM--LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 322 IVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+++ + D +LN + + + +P F + + VP + S L L K
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
++E E++ + D +YN+++ C G++ +AY +++EMK KG +P V Y S
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+++ + D L A L+++ + N+ Y+ LI F +VG I+ A + +++KG
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ P+ T+ SLL+ L + + A F
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCF 715
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 100/493 (20%), Positives = 211/493 (42%), Gaps = 13/493 (2%)
Query: 61 LTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS 120
+ H + L F Q+ + + + ++++ + ++++ S+L ++K + + D
Sbjct: 181 VNHSDMMLTLFQ-QMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
+Y I S + A+ F+E++ N S++ VL +D A++MF+ +
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
T + I + K + S+L+ R+R I + I+ K
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE--RQRAKGSIPSVIAYNCILTCLRKMG 357
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+V+EA KV +E++ ++ P+ Y I+ + G + + +K G+ P
Sbjct: 358 KVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVN 416
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---GSVSSIDPRSAIVFFNFMI 357
+ L +++ EA + E + T D+ +LI G V +D A + M+
Sbjct: 417 IMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVD--DAYKVYEKML 474
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+ ++L KN + ++ ++YK + + D++ N + + +G
Sbjct: 475 DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPE 534
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+ + +E+K + PD Y+ L+ + +L+ M GC + + YNI+I
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVN 533
F + G++ A +L M KG P TY S+++GL + L A+ +F +K +
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654
Query: 534 HDVMLARSILSTF 546
+V++ S++ F
Sbjct: 655 LNVVIYSSLIDGF 667
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/485 (21%), Positives = 203/485 (41%), Gaps = 47/485 (9%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y++++ + + + S+L++ + Y I+ L + +A VF E+
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
K +D P + N L+ +L G +D A ++ D M G+ + + + + C++
Sbjct: 370 K---KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
KL + +M +E+ + + +I G K RV++A+KV +++ +C+ + I
Sbjct: 427 KLDEACAMFEEMDYK--VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIV 484
Query: 264 YRIVAEEFKLMGSVFEREVVLK-------------------------------------K 286
Y + + F G + + K K
Sbjct: 485 YTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSID 345
R+ P Y I GLI E EL + +D N +I G
Sbjct: 545 ARRF--VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
A M KG PT+ T ++ L K ++ DE +++ + ++ Y+
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++ GR+ EAY +++E+ +KGL P++ +NSL++A + + + A + M
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
C+ N TY ILI+ +V + A + M ++G+ P +YT+++ GL + N+ A
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 526 EVFNK 530
+F++
Sbjct: 783 ALFDR 787
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 142/318 (44%), Gaps = 7/318 (2%)
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+M +E++ R + + ++IHG K E +++ ++ + C D AY IV +
Sbjct: 538 AMFEEIKARR--FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVID 595
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
F G V + +L++ + G P Y I GL R+ EA L E S + +
Sbjct: 596 GFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 655
Query: 330 DDDVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
+ + ++LI G V ID A + +++KG P L T ++L L K + +E +
Sbjct: 656 NVVIYSSLIDGFGKVGRID--EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALV 713
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
++ + + +Y ++++ LC + +A+ QEM+++G+ P Y +++
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLA 773
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ + A L+D+ A+G + YN +I S A LF +G+
Sbjct: 774 KAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNK 833
Query: 507 TYTSLLEGLCQETNLQAA 524
T LL+ L + L+ A
Sbjct: 834 TCVVLLDTLHKNDCLEQA 851
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/429 (19%), Positives = 177/429 (41%), Gaps = 7/429 (1%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
T +++ S++ L +++ V +++ + +S VY +I + +
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 141 VFNE-VKFNCE-DIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
++ + + NC D+ ++ N+ + + G + MF+E+ R + + I
Sbjct: 504 IYKDMINQNCSPDL--QLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
+ + + ++ E + + ++I GFCK +V +A+++L+E++ + +
Sbjct: 562 LIKAGFANETYELFYSMK--EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
P + Y V + + + E ++ ++ + + Y I G RI EA +
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 319 GEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
E ++ T + N+L+ + V + + A+V F M E P T L LCK
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
K ++ ++ + SY M+S L +G + EA + K G PD +
Sbjct: 740 VRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSAC 799
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
YN+++E + A L+++ G + KT +L+ + +E A + +
Sbjct: 800 YNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLR 859
Query: 498 EKGVAPDAT 506
E G A A
Sbjct: 860 ETGKARHAA 868
>gi|224111048|ref|XP_002315730.1| predicted protein [Populus trichocarpa]
gi|222864770|gb|EEF01901.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 121/537 (22%), Positives = 243/537 (45%), Gaps = 24/537 (4%)
Query: 28 RKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSY 87
R WT L+ ++ L SLV V++ H AL FF W + H ++
Sbjct: 96 RDWTTRLQNSIR--ALVPEFDHSLVYNVLHGARKPDH--ALQFFRWVERAGLIQHDRETH 151
Query: 88 HSILKSLSLSRQINAIDS-VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
I++ L +N VL+ + LD ++ +I S + Q++ +F+++K
Sbjct: 152 MKIIQILGRYSMLNHARCIVLEDMPKKGFELDEDMFVLLIDSYGKAGIVQESVKMFSKMK 211
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
+ + N+L V+ G A + F++M G+ + + V IW F + +L
Sbjct: 212 ELGVERSVKSYNALFKVIVRKGRYMMAKRFFNKMLDEGIGPTRHTYNVLIWGFFLSMRLR 271
Query: 207 QVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ ++++ R I+ V+ +I+G+ + KR+EEA K+ E++ ++ P I+Y
Sbjct: 272 TAVRFYEDMKVRG---ISPDVVTYNTMINGYYRHKRMEEAEKLFAEMKAKDIAPTVISYT 328
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + + + + + +L++ + +G+ P Y + L ++ EAK++ + +V
Sbjct: 329 TMIKGYFAVDRINDGLRLLEEMKSVGIKPNNVTYTTLLPDLCDAGKMTEAKDILKEMVRR 388
Query: 326 KFTIDDD--VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ D+ L L + D ++A+ + MI+ L +N CK + D+
Sbjct: 389 RIAPKDNSIFLKLLNSQCKAGDLKAAVDVLDGMIKLSIPSEAGHYGVLIENFCKAEEYDQ 448
Query: 384 LVEVYKVLSANDYFT------DMES--YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
V+ L ND +MES YN ++ +LC+ G+ +A + +++ +KG++ +
Sbjct: 449 AVKFVDKLIENDIILRPQSTLEMESGAYNPVIQYLCSHGQTGKAEILFRQLLKKGVEDPL 508
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
+F N+L+ +E A ++ M G + Y +LI + GE A +
Sbjct: 509 AF-NNLICGHAKEGTPDSAFEILKIMGRKGIPRDADAYRLLIESYLRKGEPADAKTALDS 567
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN----KSVNHDVMLARSILSTFMI 548
M+E G PD++ + S++E L ++ +Q A V K V ++ L IL ++
Sbjct: 568 MIEDGHLPDSSVFRSVMESLYEDGRVQTASRVMKSMVEKGVKENMDLVAKILEALLM 624
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 104/502 (20%), Positives = 201/502 (40%), Gaps = 66/502 (13%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+ ++ LS ++ + +KV I+ D Y +I + K ++A +F E+
Sbjct: 256 TYNVLIWGFFLSMRLRTAVRFYEDMKVRGISPDVVTYNTMINGYYRHKRMEEAEKLFAEM 315
Query: 146 KFNCEDIGPEICNSLLAVLASDGY-----IDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
K +DI P + + + GY I++ L++ +EM G++ + + + + C
Sbjct: 316 K--AKDIAPTVISYTTMI---KGYFAVDRINDGLRLLEEMKSVGIKPNNVTYTTLLPDLC 370
Query: 201 ENAKLGQVLSMLDE-VRKR----ENS------------------------MINGSVIAV- 230
+ K+ + +L E VR+R +NS MI S+ +
Sbjct: 371 DAGKMTEAKDILKEMVRRRIAPKDNSIFLKLLNSQCKAGDLKAAVDVLDGMIKLSIPSEA 430
Query: 231 ----LIIHGFCKGKRVEEAFKVLDELRIRECKPDFI------------AYRIVAEEFKLM 274
++I FCK + ++A K +D+L + D I AY V +
Sbjct: 431 GHYGVLIENFCKAEEYDQAVKFVDKL----IENDIILRPQSTLEMESGAYNPVIQYLCSH 486
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G + E++ ++ K GV + I G E A E+ +++ D D
Sbjct: 487 GQTGKAEILFRQLLKKGVEDPLA-FNNLICGHAKEGTPDSAFEILKIMGRKGIPRDADAY 545
Query: 335 NALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
LI S + +P A + MIE G +P S ++ ++L + + V K +
Sbjct: 546 RLLIESYLRKGEPADAKTALDSMIEDGHLPDSSVFRSVMESLYEDGRVQTASRVMKSMVE 605
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+M+ ++ L G EA G I + + + ++SL+ +
Sbjct: 606 KGVKENMDLVAKILEALLMRGHEEEALGRIDLLMSSQCNVN---FDSLLSILSEKGKTIA 662
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A KL D C + K+Y+ ++ G+ A + ++EKG +Y L++
Sbjct: 663 ALKLLDFGLQRDCDIDFKSYDKVLDALLAAGKTLNAYSILCKIMEKGGVTSWRSYEDLIK 722
Query: 514 GLCQETNLQAAFEVFNKSVNHD 535
L QE N + A ++ ++ + D
Sbjct: 723 SLNQEGNTKQA-DILSRMIKGD 743
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/480 (22%), Positives = 205/480 (42%), Gaps = 39/480 (8%)
Query: 109 QVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDG 168
++K + + D Y ++ L + +A +F +++ + N+++ S
Sbjct: 271 ELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAE 330
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVI 228
D+A K+ + + RG S + F + + K+ + L++ D ++K I+ I
Sbjct: 331 RFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNISTYNI 390
Query: 229 AVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
II C RV EA+K+ DE+ + P+ ++ I+ + + E + +
Sbjct: 391 ---IIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESAS 447
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---------- 338
+ G P + Y I GL + +I +A L E ++ + + +LI
Sbjct: 448 ERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKE 507
Query: 339 ---------------GSVSSIDPRSAIVFFNFMIEKGR-----------VPTLSTLSNLS 372
++ ++ VF +EKGR +P + + S L
Sbjct: 508 DGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILI 567
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
L K ++ E +++ +S + D +YN +V LC SG++ +AY V++EMK K +
Sbjct: 568 HGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVH 627
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P V+ Y S+++ + D L A L+++ + G N+ Y+ LI F +VG I+ A +
Sbjct: 628 PTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLI 687
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M++KG+ P+ T+ SL++ L + + A F S + LCR
Sbjct: 688 LEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCR 747
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/517 (21%), Positives = 233/517 (45%), Gaps = 34/517 (6%)
Query: 33 LLEQTLH-QLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSIL 91
+LE+ H GL + +LVA ++ L +G +P F+ +Y ++
Sbjct: 128 VLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFS----AYTVLI 183
Query: 92 KSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCED 151
+L+ +RQ +L+Q++ + ++ ++ +L + + A ++ +EVK +C +
Sbjct: 184 GALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLE 243
Query: 152 IGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM 211
+ N + G +D A K F E+ G+ + + +W C+ +LG+ +
Sbjct: 244 PDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEEL 303
Query: 212 LDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY------- 264
++ + + + +I G+ +R ++A+K+L+ LR R C P +++
Sbjct: 304 FGQMEAERD--VPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCL 361
Query: 265 ---RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GE 320
R V E L V+KK K P + Y I L + R+ EA ++ E
Sbjct: 362 GKKRKVDEALTLFD-------VMKKDAK----PNISTYNIIIDMLCMAGRVNEAYKIRDE 410
Query: 321 VIVSGKFT--IDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ ++G F + +++ + + ++ I F E+G P T +L L K+
Sbjct: 411 MELAGLFPNLLSVNIMVDRLCKANQLEEAHRI--FESASERGCNPNSVTYCSLIDGLGKK 468
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
K D+ +++ + + + Y ++ GR + + + +EM R+G PD++
Sbjct: 469 GKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLL 528
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
N+ M+ + + + +++ M + G ++++Y+ILI ++ G+ +F M +
Sbjct: 529 NTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQ 588
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNK-SVNH 534
+G A DA Y ++++GLC+ + A+EV + V H
Sbjct: 589 QGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKH 625
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 200/458 (43%), Gaps = 22/458 (4%)
Query: 83 SPLSYHSILKSLSLSRQINA----IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
S +S++SIL L R+++ D + K K N S Y II L +A
Sbjct: 350 SVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPN-----ISTYNIIIDMLCMAGRVNEA 404
Query: 139 FSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+ + +E++ + P + N ++ L ++ A ++F+ S RG +++ + I
Sbjct: 405 YKIRDEMEL--AGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLI 462
Query: 197 WKFCENAKLGQVLSMLD---EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
+ K+ + + + N +I S+I +HG R E+ K+ E+
Sbjct: 463 DGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHG-----RKEDGHKIYKEMI 517
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
R +PD + G V + + + + G P Y I GL +
Sbjct: 518 RRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQAR 577
Query: 314 EAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
E + + + F +D NA++ G S A M K PT++T ++
Sbjct: 578 ETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIV 637
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
L K ++ DE +++ + ++ Y+ ++ GR+ EAY +++EM +KGL
Sbjct: 638 DGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 697
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P+V +NSLM+A + + + A + M CS N TY+ILI+ V + A
Sbjct: 698 PNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVF 757
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ M ++G+ P+ TYT+++ GL + N+ A+ +F +
Sbjct: 758 WQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFER 795
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 178/459 (38%), Gaps = 60/459 (13%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
LS + ++ L + Q+ + + +S Y +I L + A+ +F +
Sbjct: 421 LSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEK 480
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF---IWKFCE 201
+ D P I SL+ G ++ K++ EM RG + ++K E
Sbjct: 481 MLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGE 540
Query: 202 NAKLGQVL------SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
K + L +VR ++IHG K + E + + +
Sbjct: 541 VEKGRAIFEDMKSFGFLPDVRSYS-----------ILIHGLTKAGQARETSNIFQAMSQQ 589
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
D AY V + G V + VL++ + V P Y + GL R+ EA
Sbjct: 590 GFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEA 649
Query: 316 KELGEVIVSGKFTIDDDVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
L E S ++ + ++LI G V ID A + M++KG P + T ++L
Sbjct: 650 YMLFEEAKSKGIELNVILYSSLIDGFGKVGRID--EAYLILEEMMKKGLTPNVYTWNSLM 707
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
L K + DE + ++ + + +Y+++++ LC + +A+ QEM+++GL
Sbjct: 708 DALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLI 767
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P N+ TY +IS ++VG I A L
Sbjct: 768 P-----------------------------------NVVTYTTMISGLAKVGNITDAYSL 792
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
F G PD+ ++ +L+EG+ A++VF ++
Sbjct: 793 FERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEET 831
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 104/250 (41%), Gaps = 1/250 (0%)
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
E VL++ LG + L+ RR+ +A + + KF LIG+
Sbjct: 126 EKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGA 185
Query: 341 VSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
++ P A+ M + G ++ + L + L + + + + + + + D
Sbjct: 186 LAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPD 245
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ YNV + +G + A+ E+K GL PD Y S++ C+ L A++L+
Sbjct: 246 IVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFG 305
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
QM A YN +I + + A +L + E+G P ++ S+L L ++
Sbjct: 306 QMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKR 365
Query: 520 NLQAAFEVFN 529
+ A +F+
Sbjct: 366 KVDEALTLFD 375
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 112/250 (44%), Gaps = 3/250 (1%)
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
F SQQ F +Y++++ L S +++ VL+++KV + + Y I+ L
Sbjct: 583 FQAMSQQ-GFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLA 641
Query: 131 QGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTI 190
+ +A+ +F E K ++ + +SL+ G ID A + +EM +G+ +
Sbjct: 642 KIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY 701
Query: 191 GFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD 250
+ + + ++ + L +++ + S + ++I+G C+ ++ +AF
Sbjct: 702 TWNSLMDALVKTEEIDEALICFQSMKEMKCS--PNTYTYSILINGLCRVQKYNKAFVFWQ 759
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
E++ + P+ + Y + +G++ + + ++ + G P + + I G+
Sbjct: 760 EMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNAN 819
Query: 311 RICEAKELGE 320
R EA ++ E
Sbjct: 820 RPMEAYQVFE 829
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 198/468 (42%), Gaps = 73/468 (15%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
LG + QPN +Y++I+ SL RQ+ ++ ++ I+ D Y +I
Sbjct: 189 LGSMVQKNCQPNV----FAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIH 244
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGV 185
+L + ++ NE+ + I P++ N+++ L +G + A + D+M RGV
Sbjct: 245 ALCNLCEWKHVATLLNEMVDS--KIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGV 302
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI-----IHGFCKGK 240
E + + + + C +LS +DE K ++M+ + +I I+G+CK +
Sbjct: 303 EPNVVTYTALMDGHC-------LLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQ 355
Query: 241 RVE-------------------EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
R++ EA KV D + + C P+ I+Y + + + + +
Sbjct: 356 RIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAM 415
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
+ + + + P T Y I GL C + L
Sbjct: 416 YLFGEMCRQELIPDTVTYSTLIHGL------CHVERL----------------------- 446
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ AI F+ M+ ++P L T L LCK E + + K + ++ D++
Sbjct: 447 -----QDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQ 501
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
N+ + +C +G L A + + KGL PDV Y+ ++ CR LL A KL+ +M
Sbjct: 502 VNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 561
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
+GC+ N YN + F E A++L M+ +G + DA+T T
Sbjct: 562 DENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMT 609
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 115/515 (22%), Positives = 217/515 (42%), Gaps = 36/515 (6%)
Query: 46 SLSPSLVARVINPYLLTHHSLA--------LGF-FNWASQQPNFTHSP--LSYHSILKSL 94
SLS + + I P + T H L +GF F+ ++ H P ++ ++++ +
Sbjct: 82 SLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGI 141
Query: 95 SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIG 153
+ +I + ++ D Y +I L + NT A + V+ NC+
Sbjct: 142 CVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQ--- 198
Query: 154 PEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM 211
P + N+++ L D + A +F EM +G+ + I C + V ++
Sbjct: 199 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATL 258
Query: 212 LDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
L+E+ +S I V++ ++ CK +V EA V+D++ R +P+ + Y + +
Sbjct: 259 LNEMV---DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDG 315
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
L+ + E V G P Y I G +RI +A ++ ++
Sbjct: 316 HCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLN 375
Query: 331 DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
D A+ F+ M+ KG +P + + + L CK + D+ + ++
Sbjct: 376 MD---------------EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGE 420
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ + D +Y+ ++ LC RL++A + EM P++ Y L++ C+
Sbjct: 421 MCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRY 480
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
L A L + S +++ NI I GE+E A LF N+ KG+ PD TY+
Sbjct: 481 LAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSI 540
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
++ GLC+ L A ++F + + L I +T
Sbjct: 541 MINGLCRRGLLDEASKLFREMDENGCTLNGCIYNT 575
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 169/414 (40%), Gaps = 55/414 (13%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL +A + L + +M G+ + + I FC ++G S+L ++ K
Sbjct: 65 NKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILK 124
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + +I G C ++ EA + D++ +PD + Y + +G+
Sbjct: 125 LGHQPDTATFTT--LIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNT 182
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+L + P Y I L +R++ EA L
Sbjct: 183 SAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNL------------------- 223
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
F+ M+ KG P + T ++L LC + + + + +
Sbjct: 224 ---------------FSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIM 268
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D+ S+N +V LC G++ EA+ V+ +M ++G++P+V Y +LM+ C + A K+
Sbjct: 269 PDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKV 328
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGAL-------------------RLFHNMLE 498
+D M GC N+ +YN LI+ + ++ I+ A+ ++F M+
Sbjct: 329 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVC 388
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
KG P+ +Y +L+ G C+ + A +F + +++ ST + LC
Sbjct: 389 KGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCH 442
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 102/207 (49%), Gaps = 5/207 (2%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI FN M+ P+ + L ++ K L+ + + + ++ + +++++
Sbjct: 45 AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C R+ A+ V+ ++ + G PD + + +L+ C E + A L+D+M G
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRP 164
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TY LI+ +VG A+RL +M++K P+ Y ++++ LC++ + AF +F
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224
Query: 529 N----KSVNHDVMLARSILSTFMISLC 551
+ K ++ D+ S++ + +LC
Sbjct: 225 SEMVTKGISPDIFTYNSLIHA-LCNLC 250
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 56/134 (41%)
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A M R P +N L+ + + L QM + G N+ T +ILI+
Sbjct: 45 AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
F + + A + +L+ G PD T+T+L+ G+C E + A +F+K +
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRP 164
Query: 539 ARSILSTFMISLCR 552
T + LC+
Sbjct: 165 DVVTYGTLINGLCK 178
>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 660
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/520 (22%), Positives = 217/520 (41%), Gaps = 44/520 (8%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSV 106
L P +V V+ L+ A+ F+ WA +P F HS + I+ L + +
Sbjct: 85 LDPFVVNLVVRG--LSDSETAVRFYWWAESRPGFDHSQFAIAYIVSLLFVDGNFALLSEF 142
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEICNSLLAVLA 165
L V+ + L S+YR ++ ++ F+E V C + G + N + VL
Sbjct: 143 LGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDY-NRYIGVLI 201
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMING 225
+ D K + +G+ + + +I C++ ++ V +L ++ + S
Sbjct: 202 KNCCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFS---P 258
Query: 226 SVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+ A + I CK R+ +A ++++++R + PD + Y V E +
Sbjct: 259 DIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLW 318
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS---V 341
++ K+G+ P I GL ++ EA EL ++S + + NALI
Sbjct: 319 EEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRA 378
Query: 342 SSIDPRSAIVFFN----------------------FMIEK-----------GRVPTLSTL 368
SID I+ F M+EK G P +
Sbjct: 379 GSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSY 438
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ L K LCK ++ D+ F D+ S N+++ C +++ A + +EM
Sbjct: 439 NQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDY 498
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
KG+ D Y +L+ A++L++QM + N+ YNI++ +VG+++
Sbjct: 499 KGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKR 558
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
A ++F +M++K + PD TY +L+ L + + A ++F
Sbjct: 559 AQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLF 598
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/464 (21%), Positives = 199/464 (42%), Gaps = 44/464 (9%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
+P +Y + +L S +I ++ +L + + D I L + A +
Sbjct: 224 TPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMV 283
Query: 143 NEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
K + P++ +++ L ++ A+ +++EM G++ + G I+ C
Sbjct: 284 E--KMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLC 341
Query: 201 ENAKLGQVLSMLDEVRKRENSM-INGSV-IAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
+N+K+ + E+ R S+ I SV I +I GF + +++A+ ++ +R C+
Sbjct: 342 KNSKVEEAF----ELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCE 397
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
P + Y I+ + +G + + E ++ K GV P Y + + GL C+ +L
Sbjct: 398 PGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGL------CKTHQL 451
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ A F + +E G + + + L CK
Sbjct: 452 DK----------------------------AFAFVSDHMEVGGFCDIVSCNILIDAFCKV 483
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
K +E++K + D +Y +++ L + G A + ++M + +DP+V+ Y
Sbjct: 484 KKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLY 543
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
N ++ C+ L+ A+K++ M ++ TYN LI + AL LF +M
Sbjct: 544 NIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRT 603
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
KGV PD+ T+ L+ GL E A+EV+ + + ++L R +
Sbjct: 604 KGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYMMENGIILDREV 647
>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 701
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/479 (21%), Positives = 199/479 (41%), Gaps = 37/479 (7%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
Q T S ++ + +L+ I ++V ++ V + DSS Y+ ++ +
Sbjct: 174 QNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKI 233
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
Q+A + C +L L +G ++ A+ F +M G + + I F
Sbjct: 234 QEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSL 293
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RI 254
I C+ + Q ML+E+ + N +I G CK E+AF++ +L R
Sbjct: 294 IDGLCKKGSIKQAFEMLEEMVR--NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
KP+ Y + + + E++ + ++ G+ P N Y I G C+
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGH------CK 405
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
A G A N M ++G +P + T + +
Sbjct: 406 AGSFGR----------------------------AYELMNLMGDEGFMPNIYTYNAAIDS 437
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK++++ E E+ + D +Y +++ C + +A M + G + D
Sbjct: 438 LCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEAD 497
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+ N L+ A CR+ ++ +++L+ + + G +TY +IS + + G+I+ AL+ FH
Sbjct: 498 MRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFH 557
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
NM G PD+ TY SL+ GLC+++ + A +++ ++ + T C+R
Sbjct: 558 NMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKR 616
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 177/401 (44%), Gaps = 4/401 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N +L + G I+ A +FDEMS RGV + + + + + K+ + L + +
Sbjct: 186 NCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQ 245
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R I + LI+ C+ V A ++ KP+ I + + + GS+
Sbjct: 246 R--GFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSI 303
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG-EVIVSGKFTIDDDVLNA 336
+ +L++ + G P + I GL +A L +++ S + + +
Sbjct: 304 KQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTS 363
Query: 337 LIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
+IG D A + F+ M E+G P ++T + L CK E+ ++
Sbjct: 364 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEG 423
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ ++ +YN + LC R EAY ++ + GL+ D Y L++ C+++ + A
Sbjct: 424 FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQAL 483
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ +M +G +++ NILI+ F +++ + RLF ++ G+ P TYTS++
Sbjct: 484 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCY 543
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
C+E ++ A + F+ H + + + LC++ ++
Sbjct: 544 CKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMV 584
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 165/377 (43%), Gaps = 7/377 (1%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN LL + AL +M G E + FG + FC ++ L M D R
Sbjct: 119 CNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFD--R 176
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E VI II G CK K+V+ A +L+ + + +PD + Y + G
Sbjct: 177 MVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGR 236
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ ++ K + P + I + E RI EA+EL E ++ D +
Sbjct: 237 WDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSL 296
Query: 337 LIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
LI + S +D A F FM+ KG P + T S L CK K + ++++ +S
Sbjct: 297 LIYGLCMYSRLD--EAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ +Y V++ C +G+L A + + M G+ P++ YN L+ C +
Sbjct: 355 RGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEK 414
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A + M SG ++ TYNI+I + GE+ A L+ ++ KG+ PD TYT+++
Sbjct: 415 ALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMML 474
Query: 514 GLCQETNLQAAFEVFNK 530
GL ++ A +F K
Sbjct: 475 GLYKKGLRGEADALFRK 491
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 199/450 (44%), Gaps = 12/450 (2%)
Query: 59 YLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLD 118
Y+ SL L FF+ +P S + +L ++S ++ + + + +Q+++ I +
Sbjct: 59 YMKLDDSLDL-FFHMVQCRP--LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHN 115
Query: 119 SSVYRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEIC--NSLLAVLASDGYIDNALK 175
++ + A S ++ K E P+I SLL I +AL
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMMKLGHE---PDIVTFGSLLNGFCRGDRIYDALY 172
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
MFD M G E + + + I C++ ++ L +L+ R + + +V +I G
Sbjct: 173 MFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLN--RMEVDGIRPDAVTYNSLISG 230
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
C R ++A +++ + RE PD + + + G + E E + ++ + + P
Sbjct: 231 LCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPD 290
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFN 354
Y I GL + R+ EA+++ +VS D + LI G S + F
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M ++G V T + L + C+ K + E++K + ++ +YNV++ LC +G
Sbjct: 351 EMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNG 410
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
++ +A ++ +M++ G+D D+ YN ++ C+ + A L+ + G + ++ TY
Sbjct: 411 KIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYT 470
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
++ + G A LF M E G+ P+
Sbjct: 471 AMMLGLYKKGLRGEADALFRKMKEDGILPN 500
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 104/204 (50%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F+ M+E G P + + + LCK + D +++ + + D +YN ++S
Sbjct: 170 ALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLIS 229
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC SGR +A ++ M ++ + PDV +N+L++AC +E + A++L+++M
Sbjct: 230 GLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDP 289
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TY++LI ++ A ++F M+ KG PD TY+ L+ G C+ ++ ++F
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
+ V+ + + CR
Sbjct: 350 CEMSQRGVVRNTVTYTVLIQGYCR 373
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 89/174 (51%), Gaps = 1/174 (0%)
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+FF+ M++ +P+++ S L + K K D ++ +++ + ++ + N++++
Sbjct: 68 LFFH-MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C +L A + +M + G +PD+ + SL+ CR D + A ++D+M G N+
Sbjct: 127 CRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNV 186
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
YN +I + +++ AL L + M G+ PDA TY SL+ GLC A
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDA 240
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 67/134 (50%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D+ ++ +++ C R+ +A + M G +P+V YN++++ C+ + A L
Sbjct: 150 DIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLL 209
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
++M G + TYN LIS G + A R+ M ++ + PD T+ +L++ +E
Sbjct: 210 NRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKE 269
Query: 519 TNLQAAFEVFNKSV 532
+ A E++ + +
Sbjct: 270 GRISEAEELYEEMI 283
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 178/395 (45%), Gaps = 39/395 (9%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L++ G I+ AL++ D M GV + + + C+ KL Q + +L R+
Sbjct: 153 NVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLG--RQ 207
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ V ++I CK V +A K+ +E+R + CKPD + Y ++ + F G +
Sbjct: 208 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRL 267
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E LKK G P + I ++ R +C SG +D
Sbjct: 268 DEAIRFLKKLPSYGCQP------DVISHNMILRSLC----------SGGRWMD------- 304
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
A+ M+ KG +P++ T + L LC++ + + V +++ + +
Sbjct: 305 -----------AMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHT 353
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
+ S+N ++ C + A ++ M +G PD+ YN L+ A C++ + A +
Sbjct: 354 PNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVI 413
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
Q+ + GCS +L +YN +I +VG+ E A+ L M KG+ PD T TS++ GL +
Sbjct: 414 LSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSR 473
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
E ++ A + F+ + I ++ + LC+
Sbjct: 474 EGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCK 508
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 182/418 (43%), Gaps = 12/418 (2%)
Query: 117 LDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNAL 174
+D + Y +I + ++A V + + + P +++L L G + A+
Sbjct: 147 IDVTSYNVLISGYCKSGEIEEALRVLDRM-----GVSPNAATYDAVLCSLCDRGKLKQAM 201
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LII 233
++ + V I C+ + +GQ + + +E+R N V+ ++I
Sbjct: 202 QVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMR---NKGCKPDVVTYNVLI 258
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
GFCKG R++EA + L +L C+PD I++ ++ G + +L + G
Sbjct: 259 KGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCL 318
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVF 352
P + I L + + +A + E++ T + N LI G + AI +
Sbjct: 319 PSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEY 378
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
M+ +G P + T + L LCK K D+ V + LS+ + SYN ++ L
Sbjct: 379 LEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLK 438
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G+ A +++EM KGL PD+ S++ RE +R A K + + N
Sbjct: 439 VGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFI 498
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
YN +I+ + + A+ +M+ KG P TYT+L++G+ E + A ++ N+
Sbjct: 499 YNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNE 556
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 185/423 (43%), Gaps = 18/423 (4%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN-E 144
SY+ ++ S +I VL ++ V+ +++ Y ++ SL ++A V +
Sbjct: 151 SYNVLISGYCKSGEIEEALRVLDRMGVSP---NAATYDAVLCSLCDRGKLKQAMQVLGRQ 207
Query: 145 VKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ C P++ C L+ + + A+K+F+EM ++G + + + V I FC+
Sbjct: 208 LQSKCY---PDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKG 264
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+L + + L +K + VI+ +I+ C G R +A K+L + + C P
Sbjct: 265 GRLDEAIRFL---KKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSV 321
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ + I+ G + + VL+ K G P + + I G + I A E E+
Sbjct: 322 VTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEI 381
Query: 322 IVSGKFTIDDDVLNALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+VS D N L+ ++ +D A+V + + KG P+L + + + L K
Sbjct: 382 MVSRGCYPDIVTYNILLTALCKDGKVD--DAVVILSQLSSKGCSPSLISYNTVIDGLLKV 439
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
K++ VE+ + + D+ + +V L G++REA +KR + P+ Y
Sbjct: 440 GKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIY 499
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
NS++ C+ A M A GC TY LI + G E A +L + +
Sbjct: 500 NSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYS 559
Query: 499 KGV 501
+G+
Sbjct: 560 RGL 562
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 3/179 (1%)
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F +M KG+ P + + L + CK ++ ++ +L + D+ SYNV++S C
Sbjct: 101 FLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYC 160
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
SG + EA V+ M G+ P+ + Y++++ + C L+ A ++ + S C ++
Sbjct: 161 KSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVV 217
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
T +LI + + A++LF+ M KG PD TY L++G C+ L A K
Sbjct: 218 TCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKK 276
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 136/322 (42%), Gaps = 33/322 (10%)
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEF----------KLMGSVFEREVV-------- 283
+EE + L+ + + PD IA + EF ++MG + E V
Sbjct: 95 LEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNV 154
Query: 284 --------------LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
L+ ++GV+P Y + L ++ +A ++ + K
Sbjct: 155 LISGYCKSGEIEEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYP 214
Query: 330 DDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
D LI + A+ FN M KG P + T + L K CK + DE +
Sbjct: 215 DVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFL 274
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
K L + D+ S+N+++ LC+ GR +A ++ M RKG P V +N L+ C++
Sbjct: 275 KKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQK 334
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
LL A + + M G + N +++N LI F I+ A+ M+ +G PD TY
Sbjct: 335 GLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTY 394
Query: 509 TSLLEGLCQETNLQAAFEVFNK 530
LL LC++ + A + ++
Sbjct: 395 NILLTALCKDGKVDDAVVILSQ 416
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
+G L E ++ M KG PDV +L+ C+ + A ++ + SG ++ +
Sbjct: 92 NGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTS 151
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YN+LIS + + GEIE ALR+ M GV+P+A TY ++L LC L+ A +V + +
Sbjct: 152 YNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQL 208
Query: 533 N 533
Sbjct: 209 Q 209
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 183/403 (45%), Gaps = 15/403 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ + +G + AL D + G + + I C K+G+ + L ++K
Sbjct: 133 NTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLC---KIGETRAALQMLKK 189
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E ++N V+ +II+ CK K V +A+++ E+ + PD + + + F ++G
Sbjct: 190 IEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQ 249
Query: 277 VFE-----REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
+ E E+VLK + P + + L + I AK + V++ D
Sbjct: 250 LKEAFGLFHEMVLKN-----INPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDV 304
Query: 332 DVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
++L+ ++ A F+ M G P + + + L K DE + ++K
Sbjct: 305 VTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKE 364
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ D +YN ++ LC GR+ A+ ++ EM G+ D+ YNSL++ C+
Sbjct: 365 MCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHH 424
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ A L ++ G ++ TYNILI + G ++ A +F ++L KG + +A TY
Sbjct: 425 IDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNI 484
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
++ GLC+E A + +K N+ ++ T + +L R+
Sbjct: 485 MINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRK 527
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 111/521 (21%), Positives = 221/521 (42%), Gaps = 51/521 (9%)
Query: 1 MTMRPATDLA--TRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVAR--VI 56
+ MRP + +I +I+ A+N +T + + HQL L+ ++P++V ++
Sbjct: 49 LRMRPTPSIVEFNKILGSIVKANNN-----HYTTAISLS-HQLELK-GITPTIVTFNILV 101
Query: 57 NPYL-LTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKI 115
N Y L + A F + + + +++++++ + L+ ++ V
Sbjct: 102 NCYCHLGEMTFAFSIF-AKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGF 160
Query: 116 TLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALK 175
LD YR +I L + T+ A + +++ + + N ++ L D + +A +
Sbjct: 161 HLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQ 220
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIH 234
++ EM + + + F I FC +L + + E+ + IN V +++
Sbjct: 221 LYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKN---INPDVYTFSILVD 277
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
CK + A +L + + PD + Y + + + L+ V + + V +LGVAP
Sbjct: 278 ALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAP 337
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFN 354
+ Y I GL G + +D A+ F
Sbjct: 338 HAHSYNIMINGL--------------------------------GKIKMVD--EALSLFK 363
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M KG P T ++L LCK + ++ + N D+ +YN ++ LC +
Sbjct: 364 EMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNH 423
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ +A +++++K +G+ P + YN L++ C+ L+ A+ ++ + G S N TYN
Sbjct: 424 HIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYN 483
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
I+I+ + G A L M G+ PDA TY +++ L
Sbjct: 484 IMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRAL 524
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 151/348 (43%), Gaps = 44/348 (12%)
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A + +L ++ P + + I+ + +G + + K KLG P T + I
Sbjct: 78 AISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLIN 137
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT 364
G+ + ++ EA + +++ F +D LI + I A + IE V T
Sbjct: 138 GICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNT 197
Query: 365 LSTLSNLSKN-LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ N+ N LCK + ++Y + D+ ++N ++ C G+L+EA+G+
Sbjct: 198 DVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLF 257
Query: 424 QEM-----------------------------------KRKGLDPDVSFYNSLMEACCRE 448
EM ++G+ PDV Y+SLM+ C
Sbjct: 258 HEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLV 317
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
+ + AK ++ M G + + +YNI+I+ ++ ++ AL LF M KG+APD TY
Sbjct: 318 NEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTY 377
Query: 509 TSLLEGLCQETNLQAAF----EVFNKSVNHDVMLARSILSTFMISLCR 552
SL++GLC+ + A+ E+ N + D++ S++ LC+
Sbjct: 378 NSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDV----LCK 421
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/501 (22%), Positives = 207/501 (41%), Gaps = 21/501 (4%)
Query: 72 NWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLK----------QVKVNKITLDSSV 121
NW S P F H+ SY ++ LS + S+++ V LD++
Sbjct: 89 NWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAG 148
Query: 122 YR---FIIPSLI----QGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNAL 174
R F+ +L+ A F V+ + I C LL + +
Sbjct: 149 TRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIW 208
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIH 234
+ E+ G + + I KFC+ + + +E+RKR + +V +I+
Sbjct: 209 TFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKR--GLRPTTVSFNTLIN 266
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
G CK + ++E F++ + PD Y ++ G + E + + ++ G+ P
Sbjct: 267 GLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRP 326
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFF 353
+ I G RRI A +++ D + N L+ + + D A
Sbjct: 327 NGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLV 386
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
+ M G P T + L CK + +E+ K ++ D ++ ++S C
Sbjct: 387 DEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRD 446
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
GR+R+A ++EM G+ PD + Y +++ C++ ++ KL +M +G + TY
Sbjct: 447 GRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITY 506
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN-KSV 532
N+L++ + G+++ A L ML GV PD TY LLEG C+ + ++ N K +
Sbjct: 507 NVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGL 566
Query: 533 NHDVMLARSILSTFMISLCRR 553
D S++S + SL R
Sbjct: 567 IVDYAYYTSLVSEYNKSLKDR 587
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/479 (21%), Positives = 199/479 (41%), Gaps = 37/479 (7%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
Q T S ++ + +L+ I ++V ++ V + DSS Y+ ++ +
Sbjct: 775 QNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKI 834
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
Q+A + C +L L +G ++ A+ F +M G + + I F
Sbjct: 835 QEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSL 894
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RI 254
I C+ + Q ML+E+ + N +I G CK E+AF++ +L R
Sbjct: 895 IDGLCKKGSIKQAFEMLEEMVR--NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 952
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
KP+ Y + + + E++ + ++ G+ P N Y I G C+
Sbjct: 953 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGH------CK 1006
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
A G A N M ++G +P + T + +
Sbjct: 1007 AGSFGR----------------------------AYELMNLMGDEGFMPNIYTYNAAIDS 1038
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK++++ E E+ + D +Y +++ C + +A M + G + D
Sbjct: 1039 LCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEAD 1098
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+ N L+ A CR+ ++ +++L+ + + G +TY +IS + + G+I+ AL+ FH
Sbjct: 1099 MRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFH 1158
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
NM G PD+ TY SL+ GLC+++ + A +++ ++ + T C+R
Sbjct: 1159 NMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKR 1217
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 177/401 (44%), Gaps = 4/401 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N +L + G I+ A +FDEMS RGV + + + + + K+ + L + +
Sbjct: 787 NCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQ 846
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R I + LI+ C+ V A ++ KP+ I + + + GS+
Sbjct: 847 R--GFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSI 904
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG-EVIVSGKFTIDDDVLNA 336
+ +L++ + G P + I GL +A L +++ S + + +
Sbjct: 905 KQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTS 964
Query: 337 LIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
+IG D A + F+ M E+G P ++T + L CK E+ ++
Sbjct: 965 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEG 1024
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ ++ +YN + LC R EAY ++ + GL+ D Y L++ C+++ + A
Sbjct: 1025 FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQAL 1084
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ +M +G +++ NILI+ F +++ + RLF ++ G+ P TYTS++
Sbjct: 1085 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCY 1144
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
C+E ++ A + F+ H + + + LC++ ++
Sbjct: 1145 CKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMV 1185
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/540 (22%), Positives = 236/540 (43%), Gaps = 25/540 (4%)
Query: 2 TMRPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLR-DSLSPSLVARVINPYL 60
+ R + RI + + + + + W+ +L+ +R +SP + R+ +
Sbjct: 20 SFRSHLPITPRIKKLVSDTVSILKTQQNWSQILDDCFADEEVRFVDISPFVFDRIQDV-- 77
Query: 61 LTHHSLALGFFNWAS--QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLD 118
+ + F+W S ++ F + + S LK L+ R N I+ VL ++ + L
Sbjct: 78 ----EIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLT 133
Query: 119 SSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKM 176
++ + + + KA +++ V D P++ CNSLL++L + +A K+
Sbjct: 134 HEALSHVLHAYAESGSLSKAVEIYDYV-VELYDSVPDVIACNSLLSLLVKSRRLGDARKV 192
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
+DEM RG + + C K+ +V L E R + + N V II G+
Sbjct: 193 YDEMCDRGDSVDNYSTCILVKGMCNEGKV-EVGRKLIEGRWGKGCIPN-IVFYNTIIGGY 250
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
CK +E A+ V EL+++ P + + F G + +L + ++ G+ R
Sbjct: 251 CKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGL--RV 308
Query: 297 NDYREFILGLIVER-----RICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AI 350
+ + F+ +I + ++ A+ +G I++ D N LI + + A+
Sbjct: 309 SVW--FLNNIIDAKYRHGYKVDPAESIG-WIIANDCKPDVATYNILINRLCKEGKKEVAV 365
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
F + +KG +P + + L + CK + D ++ ++ D+ +Y +++ L
Sbjct: 366 GFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGL 425
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
SG + +A + ++ +G+ PD + YN LM C+ PAK L+ +M +
Sbjct: 426 VVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDA 485
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
Y LI F G+ + A ++F +EKGV D + ++++G C+ L A N+
Sbjct: 486 YVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNR 545
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 137/329 (41%), Gaps = 36/329 (10%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ + I + C+ K + LDE K+ +I ++ +I +CK K + A K+L +
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKK--GLIPNNLSYAPLIQAYCKSKEYDIASKLLLQ 405
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ R CKPD + Y I+ + G + + + K GV+P Y + GL R
Sbjct: 406 MAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGR 465
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
AK + F+ M+++ +P + L
Sbjct: 466 FLPAK----------------------------------LLFSEMLDRNILPDAYVYATL 491
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
+ DE +V+ + D+ +N M+ C SG L EA + M + L
Sbjct: 492 IDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL 551
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
PD Y+++++ ++ + A K++ M + C N+ TY LI+ F G+ + A
Sbjct: 552 VPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEE 611
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETN 520
F M + + P+ TYT+L+ L +E++
Sbjct: 612 TFKEMQLRDLVPNVVTYTTLIRSLAKESS 640
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 165/402 (41%), Gaps = 15/402 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++ G I+NA +F E+ +G + FG I FC+ +L EV++
Sbjct: 244 NTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKE 303
Query: 218 RE---NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
R + ++I HG+ +V+ A + + + +CKPD Y I+
Sbjct: 304 RGLRVSVWFLNNIIDAKYRHGY----KVDPA-ESIGWIIANDCKPDVATYNILINRLCKE 358
Query: 275 GSVFEREVV---LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
G ++EV L + K G+ P Y I + A +L + D
Sbjct: 359 G---KKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDI 415
Query: 332 DVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
LI G V S A+ +I++G P + + L LCK + ++
Sbjct: 416 VTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSE 475
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ + D Y ++ SG EA V KG+ DV +N++++ CR +
Sbjct: 476 MLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGM 535
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
L A ++M + TY+ +I + + ++ A+++F M + P+ TYTS
Sbjct: 536 LDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTS 595
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L+ G C + + + A E F + D++ +T + SL +
Sbjct: 596 LINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAK 637
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 87/434 (20%), Positives = 164/434 (37%), Gaps = 66/434 (15%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKV--NKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
++Y ++ L +S ++ D+V +VK+ ++ D+++Y ++ L + A +F
Sbjct: 416 VTYGILIHGLVVSGHMD--DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLF 473
Query: 143 NEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+E+ +I P+ + +L+ G D A K+F +GV+ + I FC
Sbjct: 474 SEMLD--RNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC 531
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ L + L+ ++ R E ++ II G+ K + + A K+ + +CKP+
Sbjct: 532 RSGMLDEALACMN--RMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPN 589
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ Y + F G E K+ + + P Y I L E E
Sbjct: 590 VVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLE------ 643
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
A+ ++ M+ VP T + L + K+
Sbjct: 644 ---------------------------KAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTS 676
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
KVL+ D +S ++ F MK G + YNS
Sbjct: 677 G-------KVLAEPDGSNHGQS-SLFSEFF-------------HRMKSDGWSDHAAAYNS 715
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL-FHNMLEK 499
+ C +++ A D+M G S + ++ ++ F VG + + F N+ EK
Sbjct: 716 ALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEK 775
Query: 500 GVAPDATTYTSLLE 513
G+ A Y+ +LE
Sbjct: 776 GLEV-AVRYSQVLE 788
>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 529
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 194/445 (43%), Gaps = 26/445 (5%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
N T S + IL SL + + + S+ +Q++ N + + +I Q
Sbjct: 4 HHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQN 63
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
+FSVF + +L+ L G I AL D++ +G + + + +G
Sbjct: 64 ALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTL 123
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRI 254
I C K+GQ + L+ +R+ + ++ V+ II G CK K V +AF + E+
Sbjct: 124 INGLC---KVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVA 180
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
+ P + Y + +M + + +L K + P + I E ++ E
Sbjct: 181 KRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKE 240
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSK 373
AK + V++ + N+L+ ++ + A FN MI+
Sbjct: 241 AKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKM-------------- 286
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
DE + +++ + + DM YN ++ LC SGR A I EM +G P
Sbjct: 287 -------VDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPP 339
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
D+ YNSL++A C+ + A +L ++ G ++ TYNILI+ + G ++ A ++F
Sbjct: 340 DIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVF 399
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQE 518
++L KG D TY ++++G C++
Sbjct: 400 EDLLVKGYNTDVYTYNAMIKGFCKK 424
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 96/186 (51%), Gaps = 1/186 (0%)
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
VF N +++KG T + L K LC + + + + + + A + + SY +++ L
Sbjct: 69 VFAN-ILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGL 127
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C G+ R A ++ + K + PDV YN++++ C++ L+ A L+ +M A ++
Sbjct: 128 CKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSV 187
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TYN LI + +++ A+ L H M+ + + P T++ L++ C+E ++ A VF
Sbjct: 188 VTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAV 247
Query: 531 SVNHDV 536
+ DV
Sbjct: 248 MMKEDV 253
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 95/211 (45%), Gaps = 14/211 (6%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M+ K P++ T + L LC + + + + + D + ++++++ C G+
Sbjct: 178 MVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGK 237
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK--------------KLWDQM 461
++EA V M ++ + P++ YNSLM+ ++++ AK L+++M
Sbjct: 238 MKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEM 297
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
++ YN LI + G AL+ M +G PD TY SLL+ LC+ ++
Sbjct: 298 HFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHV 357
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A E+ K + + + + + LC+
Sbjct: 358 DKAIELLTKLKDQGIQPSVCTYNILINGLCK 388
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 90/194 (46%)
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
K P++ + +L K N +V +++ + N +++ + +++++ G+
Sbjct: 5 HKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNA 64
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
++ V + +KG D + +L++ C + + A D++ A G N +Y LI
Sbjct: 65 LSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLI 124
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ +VG+ AL + K V PD Y ++++GLC++ + AF ++ + V +
Sbjct: 125 NGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRIC 184
Query: 538 LARSILSTFMISLC 551
+ +T + LC
Sbjct: 185 PSVVTYNTLICGLC 198
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 8/197 (4%)
Query: 133 KNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTI 190
K +A ++F E+ F + I P+ I NSL+ L G ALK EM +RG
Sbjct: 285 KMVDEAMNLFEEMHF--KQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIF 342
Query: 191 GFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVL 249
+ + C+N + + + +L +++ + I SV ++I+G CK R+++A KV
Sbjct: 343 TYNSLLDALCKNYHVDKAIELLTKLKDQG---IQPSVCTYNILINGLCKSGRLKDAEKVF 399
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
++L ++ D Y + + F G E ++ K + G +P + I L +
Sbjct: 400 EDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDK 459
Query: 310 RRICEAKELGEVIVSGK 326
+A + E+IV GK
Sbjct: 460 GENDKAGKFREMIVRGK 476
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 64/127 (50%)
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
+ K P + + ++ + + + L QM +G + NL T +ILI+ +S++G+
Sbjct: 3 LHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQ 62
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
+ +F N+L+KG DA T+T+L++GLC + + A +K V L + T
Sbjct: 63 NALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGT 122
Query: 546 FMISLCR 552
+ LC+
Sbjct: 123 LINGLCK 129
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 133/522 (25%), Positives = 217/522 (41%), Gaps = 78/522 (14%)
Query: 46 SLSPSLVARVINPYLLTHHSLA-LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAID 104
S P+L + P+L SL L + +P+ T LS +S LKSLSL ++
Sbjct: 32 SADPALSPLAVLPHLAATPSLPHLLLTASVAGRPHTTS--LSLYSRLKSLSLPIPTASLH 89
Query: 105 SVLKQVK-VNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAV 163
+L + L + ++R +P + FN +L
Sbjct: 90 PLLSSLPPAPAFVLFADIFRLRLP--------------LSTTTFNI----------MLRH 125
Query: 164 LASDGYIDNALKMFDEM-SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
L + G AL++ +M S V ++T+ I FC ++ + ++ E+R+R
Sbjct: 126 LCTAGKPVRALELLRQMPSPNAVTYNTV-----IAGFCARGRVQAGIEIMREMRERGGIA 180
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR-ECKPDFIAYRIVAEEFKLMGSVFERE 281
+ A +I G+CK +VE+A KV DE+ + +P+ + Y + + G++ E
Sbjct: 181 PDKYTYAT-VISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNL---E 236
Query: 282 VVLKKKRKL---GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
V L+ + ++ GV+ Y F+ L +E R EA L E + D N LI
Sbjct: 237 VALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILI 296
Query: 339 -GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL---------------------- 375
G + A+ F M+ KG T+ T ++L L
Sbjct: 297 NGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIR 356
Query: 376 -------------CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
C D E+ + D +YN ++ LC GRL EA G+
Sbjct: 357 PDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGL 416
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
I+EM ++G+ PD+ YN+L+ + ++ A K+ D+M G + L TYN +I
Sbjct: 417 IEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCL 476
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G+ A L M+ G+ PD +TY SL+EGL E AA
Sbjct: 477 NGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTEDERLAA 518
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 170/434 (39%), Gaps = 81/434 (18%)
Query: 120 SVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDE 179
S+ ++ + + G+ + S+++ +K I + LL+ L A +F +
Sbjct: 51 SLPHLLLTASVAGRPHTTSLSLYSRLKSLSLPIPTASLHPLLSSLPPA----PAFVLFAD 106
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
+ + ST F + + C K + L +L ++ N++ +VIA GFC
Sbjct: 107 IFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQM-PSPNAVTYNTVIA-----GFCAR 160
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
RV+ +++ E+R R G+AP Y
Sbjct: 161 GRVQAGIEIMREMRERG----------------------------------GIAPDKYTY 186
Query: 300 REFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMI 357
I G ++ +A K E++ GK + + NALIG + A+ + M+
Sbjct: 187 ATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMV 246
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
++G T++T YN+ V L GR
Sbjct: 247 DRGVSMTVAT-----------------------------------YNLFVHTLFMEGRAA 271
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
EA+ +++EM KGL PD YN L+ C+E + A K+++ M G + TY LI
Sbjct: 272 EAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLI 331
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
S G ++ RLF++ + +G+ PD Y +L+ C ++ AFE+ + +
Sbjct: 332 HALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRIT 391
Query: 538 LARSILSTFMISLC 551
+T M LC
Sbjct: 392 PDDVTYNTLMRGLC 405
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 208/476 (43%), Gaps = 10/476 (2%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A+ FN N T ++ IL SL S +Q+++ I + + +I
Sbjct: 36 AVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILI 95
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVE 186
AFS+ ++ N+LL L +G + AL D + +
Sbjct: 96 NCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFH 155
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI--NGSVIAVLIIHGFCKGKRVEE 244
+ +G I C K G+ + L +RK E ++ ++ II FCK K V +
Sbjct: 156 LDQVSYGTLINGLC---KSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVID 212
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A+ + E+ +++ P+ + + + F ++G + E +L + V P + I
Sbjct: 213 AYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILID 272
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVL---NALIGSVSSIDPRSAIVFFNFMIEKGR 361
GL E + +A + V++ K ++ +V+ + + G + A FN + +G
Sbjct: 273 GLCKEGEVKKATSVLSVMI--KQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGV 330
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P + + S + LCK DE V+++K + + + +Y+ ++ LC SGR+ + +
Sbjct: 331 TPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWD 390
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+I E+ +G ++ YNSL+ C+ + A L +M G ++ TY L+
Sbjct: 391 LIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLC 450
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ G ++ A R++ ++L KG + YT ++ GLC+E A + ++ ++ M
Sbjct: 451 KNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCM 506
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/515 (20%), Positives = 226/515 (43%), Gaps = 54/515 (10%)
Query: 17 IISASNRTRPARKWTPLLEQ--TLHQLGLRDSLSPSLVARVINPYLLT--------HHSL 66
I+ +N T P ++ +L ++ + S S + + I P + T H
Sbjct: 43 ILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLC 102
Query: 67 ALGF-FNWASQQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
L F F+ ++ + P ++ +++L+ L L+ ++ + V + LD Y
Sbjct: 103 QLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYG 162
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMS 181
+I L + T+ A + +++ + P++ +++ D + +A ++ EM
Sbjct: 163 TLINGLCKSGETRAALQLLRKIE-GLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMI 221
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGK 240
+ + + + F I+ FC +L + + +L+E+ +N +V ++I G CK
Sbjct: 222 VKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNN---VNPNVYTFNILIDGLCKEG 278
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
V++A VL + + +P+ + Y + + + L+ V + + V GV P + Y
Sbjct: 279 EVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYS 338
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKG 360
I GL C+ K + E A+ F M K
Sbjct: 339 VMINGL------CKNKMVDE----------------------------AVKLFKEMHLKN 364
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P T S+L LCK + ++ ++ ++ ++ +YN +++ LC + ++ +A
Sbjct: 365 MTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAI 424
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
++ +MK +G+ PD+S Y +L++ C+ L+ A++++ + G N++ Y ++I+
Sbjct: 425 ALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGL 484
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ G + AL L M + G PDA TY +L+ L
Sbjct: 485 CKEGFFDEALSLLSQMEDNGCMPDAVTYETLISAL 519
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 5/173 (2%)
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
N D + +L N++ + +N ++S L + A Q+M+ KG+ P++ +
Sbjct: 32 NLDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTF 91
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
N L+ L A + ++ G + T N L+ G+++ AL +++
Sbjct: 92 NILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIR 151
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS-----VNHDVMLARSILSTF 546
K D +Y +L+ GLC+ +AA ++ K V DV++ +I+ +F
Sbjct: 152 KRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSF 204
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 62/135 (45%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+S+L L + Q++ ++L ++K I D S Y ++ L + + A ++ +
Sbjct: 405 ITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQD 464
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + + ++ L +G+ D AL + +M G + + I +N K
Sbjct: 465 LLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNK 524
Query: 205 LGQVLSMLDEVRKRE 219
G+ + +L E+ RE
Sbjct: 525 NGKAVKLLREMIARE 539
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/509 (23%), Positives = 221/509 (43%), Gaps = 45/509 (8%)
Query: 50 SLVARVINPY-----LLTHHSLALGFFNWA----SQQPNFTHSP--LSYHSILKSLSLSR 98
SL+A ++P LL H + G A S F SP ++Y+++LK+
Sbjct: 200 SLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKG 259
Query: 99 QINAIDSVLKQVKVNKITLDSSVYRFIIPS------LIQGKNTQKAFSVFNEVKFNCEDI 152
+ ++L ++K I + Y ++ + + Q N +A + F
Sbjct: 260 MLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFG--------F 311
Query: 153 GPEIC--NSLLAVLASDGYIDNALKMFDEMSHRG------VEFSTIGFGVFIWKFCENAK 204
P++ N L A L G +D A K+ DEM H V ++T+ F ++ +A
Sbjct: 312 EPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDA- 370
Query: 205 LGQVLSMLDEVRKR--ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L++L+E+R + ++S++ +++ + G C+ ++EEA L + PD I
Sbjct: 371 ----LNLLEEMRDKGVKSSLVTHNIV----VKGLCREGQLEEALGRLKMMTEEGLAPDVI 422
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + + +V + V++ + + G+ T + L E+R EA+EL
Sbjct: 423 TYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSP 482
Query: 323 VSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
F D+ ++ + P A+ ++ M ++ P++ T + L K LC K
Sbjct: 483 PQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKL 542
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
E ++ L D +YN+++ C G L +A+ +M PDV N+L
Sbjct: 543 TEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTL 602
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
M C L A KL++ G ++ TYN LI + G+++ AL F +M +G+
Sbjct: 603 MNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGL 662
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNK 530
PDA TY +L L + + A + +K
Sbjct: 663 QPDAFTYNVVLSALSEAGRSEEAQNMLHK 691
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 181/418 (43%), Gaps = 6/418 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y++++ + + I +V++ + D Y + L Q +AF + +E+
Sbjct: 282 TYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEM 341
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ + + P++ N+L+ +AL + +EM +GV+ S + + + C
Sbjct: 342 E-HLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREG 400
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+L + L L + E + + +I +CK + V +AF ++DE+ K D
Sbjct: 401 QLEEALGRLKMMT--EEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFT 458
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+ E E +L+ + G P Y + E + A L + +
Sbjct: 459 LNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMS 518
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
K T N LI + +I + AI N +++KG VP +T + + CK +
Sbjct: 519 KRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLE 578
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
+ + + + N + D+ + N +++ LC G+L +A + + KG DV YN+L+
Sbjct: 579 KAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLI 638
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+A C++ + A + M A G + TYN+++S SE G E A + H + E G
Sbjct: 639 QALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESG 696
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 173/405 (42%), Gaps = 22/405 (5%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ S G + +AL M G+ + + + C LG+ ++L R
Sbjct: 214 NLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLL--ARM 271
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ + ++ + + +++A V++ + +PD Y ++A G V
Sbjct: 272 KKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKV 331
Query: 278 FEREVVLKKKRKLG-VAPRTNDYREFILGLIVERRICEA----KELGEVIVSGKFTIDDD 332
E + + L V+P Y + +R +A +E+ + V +
Sbjct: 332 DEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNI 391
Query: 333 VLNALI--GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK-RNKSDELVEVYK 389
V+ L G + A+ M E+G P + T + L CK RN + V + +
Sbjct: 392 VVKGLCREGQL-----EEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDE 446
Query: 390 VLSAN---DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
++ + D FT N ++ LC R EA +++ ++G PD Y ++M A
Sbjct: 447 MVRSGLKMDTFT----LNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYF 502
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+E+ PA LWD+M + ++ TYN LI +G++ A+ + +++KG+ PD T
Sbjct: 503 KENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDT 562
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
TY ++ C+E +L+ AF+ NK + + +T M LC
Sbjct: 563 TYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLC 607
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 1/198 (0%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M ++G PT +T + L + + V + ++A + D+ +YNV+ + LC +G+
Sbjct: 271 MKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGK 330
Query: 416 LREAYGVIQEMKRKGL-DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ EA+ + EM+ + PDV YN+L++AC + A L ++M G +L T+N
Sbjct: 331 VDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHN 390
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
I++ G++E AL M E+G+APD TY +L++ C+ N+ AF + ++ V
Sbjct: 391 IVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRS 450
Query: 535 DVMLARSILSTFMISLCR 552
+ + L+T + +LC+
Sbjct: 451 GLKMDTFTLNTLLYNLCK 468
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 190/450 (42%), Gaps = 49/450 (10%)
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNAL 174
++ D Y ++ + + + + A ++ E++ N ++ L +G ++ AL
Sbjct: 347 VSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEAL 406
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIH 234
M+ G+ I + I +C+ + + ++DE+ + M ++ +L +
Sbjct: 407 GRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLL--Y 464
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVA----EEFKLMGSVFEREVVLKKKRKL 290
CK KR EEA ++L R PD ++Y V +E K +++ + + K+K
Sbjct: 465 NLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRK--- 521
Query: 291 GVAPRTNDYREFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALIGS-VSSIDPRS 348
+ P Y I GL ++ EA +L E++ G DD N +I + D
Sbjct: 522 -LTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKG-LVPDDTTYNIIIHAYCKEGDLEK 579
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A F N M+E P + T + L LC K ++ +++++ + D+ +YN ++
Sbjct: 580 AFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQ 639
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG--- 465
LC G + A +M+ +GL PD YN ++ A A+ + ++ SG
Sbjct: 640 ALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLS 699
Query: 466 --------------------------C-------SGNLKTYNILISKFSEVGEIEGALRL 492
C G+ ++YN + + G+++ A +
Sbjct: 700 ERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAV 759
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
M++KG++ D++TY +L+EGL + Q
Sbjct: 760 LDEMMQKGMSVDSSTYITLMEGLIKRQKRQ 789
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 77/143 (53%)
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
++V++ L A + ++N++V C+ G L +A + M+ GL PDV YN+L++A
Sbjct: 195 LDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKA 254
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
CR+ +L A+ L +M G + TYN L+S ++ +G I+ A + M G PD
Sbjct: 255 HCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPD 314
Query: 505 ATTYTSLLEGLCQETNLQAAFEV 527
TY L GLCQ + AF++
Sbjct: 315 LWTYNVLAAGLCQAGKVDEAFKL 337
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 2/183 (1%)
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
VL+AL S S+ P++++ F +I P T + L C + + + +
Sbjct: 179 VLSALARSPST-SPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQ 237
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D+ +YN ++ C G L EA ++ MK++G+ P + YN+L+ A R ++
Sbjct: 238 GFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIK 297
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG-VAPDATTYTSL 511
A + + M A G +L TYN+L + + G+++ A +L M V+PD TY +L
Sbjct: 298 QATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTL 357
Query: 512 LEG 514
++
Sbjct: 358 VDA 360
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 202/471 (42%), Gaps = 12/471 (2%)
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
+++L L +R+ + + K+V ++ Y +I +G +A SVF+++K
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
+ N+LL L G + +ALK+F EM ++ + + F ++
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFC----KGKRVEEAFKVLDELRIRECKPDFIA 263
L+ L ++RK +S+ G+ L++ G C R+E+A + E++ +PD +
Sbjct: 121 ALAHLQDMRKSSSSVATGTY--NLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLES 178
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y I+ G + E + + +P Y + G + EA+ L + I+
Sbjct: 179 YHILLSALSDSGRMAEAHALFSA---MTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEIL 235
Query: 324 SGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+ + + +I +D A F MIE VP T + L CK +
Sbjct: 236 KAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLE 295
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTS-GRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+ ++++ + + +YN ++ LC G + A + +++ GL P + YNSL
Sbjct: 296 DAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSL 355
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
++ C L A + +D+M C+ N+ TY+ILI +V ++ A + +M G
Sbjct: 356 IQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGY 414
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
P TY L+ G C+ L++A F K I +T + LC+
Sbjct: 415 TPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCK 465
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/490 (22%), Positives = 201/490 (41%), Gaps = 63/490 (12%)
Query: 58 PYLLTHHSLALGFFNWASQQPNFTH-----------SPLSYHSILKSLSL-SRQINAIDS 105
P +H+ L GFF + H + +Y+ +LK L ++ N ++
Sbjct: 100 PTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQ 159
Query: 106 VL---KQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSL 160
+ K++K + + D Y ++ +L +A ++F+ + P+I N L
Sbjct: 160 AMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT-----CSPDIMTYNVL 214
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
+ G A + E+ G E + + + I +C+ K+ + + ++ E+
Sbjct: 215 MDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVF--MKMIES 272
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF-KLMGSVFE 279
+ + +V +I GFCK +E+A K+ E+ CK + Y + + K G V+
Sbjct: 273 NCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYT 332
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+ K G+ P Y I G C+A+ L E
Sbjct: 333 AVDLFNKLEGAGLTPTIVTYNSLIQGF------CDARRLSE------------------- 367
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
A+ +F+ M E P + T S L LCK + E + + + A+ Y
Sbjct: 368 ---------AMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPT 417
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ +Y +++ C G L+ A ++MK G P+ +N+L++ C+ + +L
Sbjct: 418 VVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLC 477
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
M A GC ++ TYN LIS +E A RLF M AP+ TT+ L+ GLC +
Sbjct: 478 HMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQK 534
Query: 520 NLQAAFEVFN 529
++ A + +
Sbjct: 535 KVEEARNILD 544
>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 738
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 189/441 (42%), Gaps = 35/441 (7%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE- 144
+Y ++++ +++ +SV +++ + D VY ++ +N KA +V+
Sbjct: 297 AYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSM 356
Query: 145 ----VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+K NC I + +L L G + MF+E G+ + + C
Sbjct: 357 ISRGIKTNCV-----IFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALC 411
Query: 201 ENAKLGQVLSMLDEVR--------KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
+ K+ + MLDE++ K ++ING F +GK +E A + E+
Sbjct: 412 KLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGY---------FLQGKPIE-AQSLFKEM 461
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
R KPD +AY ++A F + FE +L GV P + ++ I GL ++
Sbjct: 462 EERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKV 521
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSV-------SSIDPRSAIVFFNFMIEKGRVPTL 365
EA+E + I ++ AL+ S + + A + M+E P+
Sbjct: 522 EEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSK 581
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
S + LC + ++ + + D +Y +M++ C + L EA+ + ++
Sbjct: 582 VMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKD 641
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
MK +G+ PD Y ++ C+ + LR A +L+ M G ++ Y ++I G
Sbjct: 642 MKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGH 701
Query: 486 IEGALRLFHNMLEKGVAPDAT 506
E A +L++ M++ G+ P AT
Sbjct: 702 TEIAFQLYNEMIDMGMTPGAT 722
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 119/537 (22%), Positives = 208/537 (38%), Gaps = 62/537 (11%)
Query: 46 SLSPSLVARVINPYLLTHH-SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAID 104
S P+ + YL ++ SLA +F Q F+H+ +Y SI++ L +D
Sbjct: 56 SFEPNTFKILQKLYLYQNNPSLAYSYFTQLKNQHGFSHNIQTYTSIIRILCYYNLDRKLD 115
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNT----QKAFSVFNEVKFNCED--------- 151
S+ + + + SL +G N F+ FN C
Sbjct: 116 SLFLDIIDHSKQDPCFEINVLFDSLFEGVNDVNEDHYLFNAFNGFVKACVSQNMFVEAID 175
Query: 152 ----------IGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
I P I N L+ L +D AL +F G+ F+ + + I
Sbjct: 176 FLLQTRKNVVILPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKAL 235
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
C+ V+ + DE++ E + + S I G CK R + + VL + R R
Sbjct: 236 CKKGDWENVVRVFDEMK--EAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHV 293
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
AY V F + E E V + K G+ P Y + G C ++
Sbjct: 294 HKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGY------CNSRNFD 347
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+ A+ + MI +G S + L +
Sbjct: 348 K----------------------------ALAVYKSMISRGIKTNCVIFSCILHCLDEMG 379
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
++ E+V++++ + F D ++YN++ LC G++ +A G++ E+K LD D+ Y
Sbjct: 380 RALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYT 439
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+L+ + A+ L+ +M G ++ YN+L + F A+ L + M +
Sbjct: 440 TLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQ 499
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
GV P++TT+ ++EGLC ++ A E FN V ++ I + + C LI
Sbjct: 500 GVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALI 556
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/362 (19%), Positives = 143/362 (39%), Gaps = 14/362 (3%)
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
+ R + +D + ++ K + + +D Y + +L + A + +E+K D+ +
Sbjct: 378 MGRALEVVD-MFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMK 436
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+L+ G A +F EM RG + + + V F N + + +L+ +
Sbjct: 437 HYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYM 496
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ + S +II G C +VEEA + + L+ + Y + +
Sbjct: 497 ESQ--GVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGY-CEA 553
Query: 276 SVFERE-------VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFT 328
++ E+ ++L+ ++ + P Y + L + A L + + FT
Sbjct: 554 ALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFT 613
Query: 329 IDDDVLNALIGSVSSID--PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
D +I + P + +F + M E+G P T + + CK N E E
Sbjct: 614 PDAVTYTIMINGYCKTNCLPEAHELFKD-MKERGITPDAVTYTIMINGYCKMNCLREAHE 672
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
++K + D+ +Y V++ L SG A+ + EM G+ P + + +A
Sbjct: 673 LFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGMTPGATLKRCIQKANK 732
Query: 447 RE 448
R+
Sbjct: 733 RQ 734
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/478 (21%), Positives = 199/478 (41%), Gaps = 46/478 (9%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +++ L +I +VL ++ +Y II S + A V +
Sbjct: 118 TYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEAL 177
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ CN ++ + G +D L+M ++ G E + + + C +
Sbjct: 178 HAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRW 237
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
G V ++DE+ K V EA L ++ C PD Y
Sbjct: 238 GDVEELMDEMVK------------------------VHEA---LSQMAQHGCTPDIRMYA 270
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + G +L + G+ P Y + G+ R +A+EL +
Sbjct: 271 TIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQK 330
Query: 326 KFTIDDDVLNALI------GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+DD N L+ G V + I M+E G +P + T + + CK
Sbjct: 331 NCPLDDVTFNILVDFFCQNGLVDRV-----IELLEQMLEHGCMPDVITYTTVINGFCKEG 385
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
DE V + K + + + SY +++ LC++ R +A ++ M ++G P+ +N
Sbjct: 386 LIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFN 445
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+++ C++ L+ A +L QM +GC+ +L +Y+ +I + G+ E AL L + M+ K
Sbjct: 446 TIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINK 505
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNK----SVNHDVMLARSILSTFMISLCRR 553
G+ P+ TY+S+ L +E + ++F+ ++ D +L +++S SLC+R
Sbjct: 506 GITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVIS----SLCKR 559
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 161/367 (43%), Gaps = 36/367 (9%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
+ +G+ + A ++ M G++ + + + + C + + +L E+ ++ +
Sbjct: 276 ICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLD 335
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
+ V +++ FC+ V+ ++L+++ C PD I Y V F G + E ++
Sbjct: 336 D--VTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVML 393
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
LK G P T Y + GL R +A+EL
Sbjct: 394 LKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEEL------------------------- 428
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ MI++G +P T + + LCK+ ++ +E+ K + N D+ SY
Sbjct: 429 ---------MSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISY 479
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+ ++ L +G+ EA ++ M KG+ P+V Y+S+ A RE + +++D +
Sbjct: 480 STVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQD 539
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
+ + YN +IS + E + A+ M+ G P+ +TYT+L++GL E L
Sbjct: 540 ATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCE 599
Query: 524 AFEVFNK 530
A ++ ++
Sbjct: 600 AQDLLSE 606
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/393 (20%), Positives = 163/393 (41%), Gaps = 61/393 (15%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L G I +AL + DEM+ R + V I C + L +L+ + + +++
Sbjct: 126 LCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLD 185
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
G+ L+I+ C V+E ++L +L + C+ D ++Y V
Sbjct: 186 TGN--CNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVL--------------- 228
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
+ +C AK G+V +++++ ++ +
Sbjct: 229 --------------------------KGLCAAKRWGDV---------EELMDEMVKVHEA 253
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ + M + G P + + + +CK + E+ + + ++ Y
Sbjct: 254 L---------SQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCY 304
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N ++ +C++ R +A ++ EM +K D +N L++ C+ L+ +L +QM
Sbjct: 305 NTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLE 364
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
GC ++ TY +I+ F + G I+ A+ L NM G P+ +YT +L+GLC
Sbjct: 365 HGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVD 424
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
A E+ ++ + + +T + LC++ L+
Sbjct: 425 AEELMSRMIQQGCLPNPVTFNTIINFLCKKGLV 457
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 179/395 (45%), Gaps = 27/395 (6%)
Query: 85 LSYHSILKSLSLSRQINAIDSV----------LKQVKVNKITLDSSVYRFIIPSLIQGKN 134
+SY+++LK L +++ ++ + L Q+ + T D +Y ++I G
Sbjct: 222 VSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYA----TIIDGIC 277
Query: 135 TQKAFSVFNEVKFNCEDIGPE---IC-NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTI 190
+ V NE+ G + +C N++L + S + A ++ EM + +
Sbjct: 278 KEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDV 337
Query: 191 GFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD 250
F + + FC+N + +V+ +L+++ E+ + + +I+GFCK ++EA +L
Sbjct: 338 TFNILVDFFCQNGLVDRVIELLEQML--EHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 395
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
+ CKP+ I+Y IV + + E ++ + + G P + I L +
Sbjct: 396 NMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKG 455
Query: 311 RICEAKEL-GEVIVSGKFTIDDDVLN---ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
+ +A EL +++V+G + D+++ + G + A+ N MI KG P +
Sbjct: 456 LVEQAIELLKQMLVNG---CNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVI 512
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T S+++ L + + D++++++ + +D YN ++S LC A + M
Sbjct: 513 TYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYM 572
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
G P+ S Y +L++ E LL A+ L ++
Sbjct: 573 VSNGCMPNESTYTALIKGLASEGLLCEAQDLLSEL 607
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 80/178 (44%), Gaps = 10/178 (5%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P T + + LC R + + + V +++ Y+V++ C SG A V
Sbjct: 114 PNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRV 173
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI----- 477
++ + KG D N ++ A C + + ++ ++ GC ++ +YN ++
Sbjct: 174 LEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCA 233
Query: 478 -SKFSEVGEIEGALRLFH----NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
++ +V E+ + H M + G PD Y ++++G+C+E + + A E+ ++
Sbjct: 234 AKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSR 291
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
A+G + + YN +++ + VG++E A RL + V P+A TY ++ GLC +
Sbjct: 77 AAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAV---PVPPNAYTYFPVVRGLCGRGRIA 133
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A V ++ + + + + S CR
Sbjct: 134 DALAVLDEMTSRSCVPIPPMYHVIIESACR 163
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/536 (21%), Positives = 220/536 (41%), Gaps = 71/536 (13%)
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
+LK L + + +++++ ++ D Y +I L + K ++A + E++
Sbjct: 4 VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
C +L+ L DG +D A+++ + M +G + + +G I FC N L +
Sbjct: 64 CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123
Query: 210 SMLDEVR------------------------KRENSMINGS---------VIAVLIIHGF 236
+ DE+ K N+++N V +I G
Sbjct: 124 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 183
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
CK R A +L+ + + +P + Y ++ G V + +L+ + G
Sbjct: 184 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADV 243
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSSIDPRS-AIVFF 353
Y + GL + ++ EA +L + + ++ +V N LIG + + A+
Sbjct: 244 VTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH 303
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
M++KG L T + L K K E +E++K + + + +Y++++ C
Sbjct: 304 RKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKM 363
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC------- 466
L A G+ EM+ GL+P + YN+LM + C+E L AK L+ +M + C
Sbjct: 364 RMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISF 423
Query: 467 ----SGNLK------------------------TYNILISKFSEVGEIEGALRLFHNMLE 498
G LK T++ LI++ S++GE++ A M+
Sbjct: 424 NTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVA 483
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRV 554
G PDA Y SLL+GL + + + ++ +L R I+ST + LC +
Sbjct: 484 SGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSI 539
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 139/305 (45%), Gaps = 3/305 (0%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+++ G C+ V EA ++ E+ + PD ++Y + + E +L +
Sbjct: 3 IVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAA 62
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G P + + GL + R+ EA EL E + F D + LI G ++ +
Sbjct: 63 GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRG 122
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F+ M+ KG + T S L LC+ + E V ++ + D+ +Y ++
Sbjct: 123 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 182
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC GR A ++ M KG +P YN L+ C+E L+ A K+ M G +
Sbjct: 183 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKAD 242
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNML--EKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
+ TYN L+ + G+++ AL+LF++M E + P+ T+ L+ GLC+E L A ++
Sbjct: 243 VVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKI 302
Query: 528 FNKSV 532
K V
Sbjct: 303 HRKMV 307
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 98/201 (48%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M K P + + + L LCK K E V + + A F + + ++ LC GR
Sbjct: 24 MGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGR 83
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ EA +++ MK+KG D DV Y +L+ C L K+L+D+M G S N+ TY+
Sbjct: 84 MDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSC 143
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
L+ +G+ + A + + M E G+ PD TYT L++GLC++ A ++ N V
Sbjct: 144 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 203
Query: 536 VMLARSILSTFMISLCRRVLI 556
+ + + LC+ L+
Sbjct: 204 EEPSNVTYNVLLSGLCKEGLV 224
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 76/149 (51%)
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N+++ LC +G + EA G+I+EM RK + PD+ YN+L+ C+ L+ A L +M A
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
+GC N T L+ + G ++ A+ L M +KG D Y +L+ G C NL
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCR 552
E+F++ + + S + LCR
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCR 150
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 188/437 (43%), Gaps = 48/437 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL L G ++ AL+ ++M + GVE + + + F ++L ++ K
Sbjct: 309 NILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGF-------RILGLISGAWK 361
Query: 218 RENSMI-NGS----VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
M+ NG V ++I G C+ +EE+FK+ +++ + K + Y ++
Sbjct: 362 VVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLC 421
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
G + E ++L + +G+ P Y I GL + EA EL E + S + +
Sbjct: 422 KSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSF 481
Query: 333 VLNALIG----------------SVSSIDPRSAIVFFNFMI------------------- 357
V +A+I SV+ D I+ +N MI
Sbjct: 482 VCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQI 541
Query: 358 -EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
EKG PT+ T ++L CK+ K E V++ + + +Y +++ C G +
Sbjct: 542 IEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDM 601
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
+ ++ EM+ K + P Y +++ C+E L + +L M+A G + TYN +
Sbjct: 602 HSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTV 661
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I F + +++ A +L + ML+ + P TY L+ GLC NL+ A + + +
Sbjct: 662 IQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSI 721
Query: 537 MLARSILSTFMISLCRR 553
L + +T + + C +
Sbjct: 722 RLTKVAYTTIIKAHCAK 738
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 188/399 (47%), Gaps = 21/399 (5%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE--VRKRENSMING 225
G I+ + K+ ++M +G++ S + + V + C++ ++ + + +L E V + ++
Sbjct: 389 GNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTY 448
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD-FIAYRIVAEEFKLMGSVFEREVVL 284
SV+ IHG CK VEEA ++ +E+ + P+ F+ I++ F+ G++ E ++
Sbjct: 449 SVL----IHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFE-KGAISEAQMYF 503
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV------LNALI 338
K VA E IL I+ + +GE + S K I+ + N+LI
Sbjct: 504 DSVTKSDVA------EEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLI 557
Query: 339 -GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
G A+ + + G VPT T + L C+ + ++ + A
Sbjct: 558 YGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIK 617
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
+Y V+V LC GRL E+ +++ M +GL PD YN+++++ C+ L+ A +L
Sbjct: 618 PTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQL 677
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+QM + TYN+LI+ G ++ A RL + ++ + YT++++ C
Sbjct: 678 HNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCA 737
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+ ++Q A F++ V ++ S + LC+R LI
Sbjct: 738 KGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLI 776
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 186/435 (42%), Gaps = 9/435 (2%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLA 165
V++++ +N + D Y +I Q N +++F + ++ + LL+ L
Sbjct: 362 VVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLC 421
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV---RKRENSM 222
G ID A+ + EM G++ + + V I C+ + + + + +E+ R NS
Sbjct: 422 KSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSF 481
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+ ++I+ L F KG + EA D + + + I Y I+ + + +G++ E
Sbjct: 482 VCSAIISGL----FEKGA-ISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVR 536
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI-VSGKFTIDDDVLNALIGSV 341
K+ + G++P + I G + ++ EA +L + I V G + G
Sbjct: 537 SYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYC 596
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
D S + M K PT T + + K LCK + E V++ K + A F D
Sbjct: 597 EEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQI 656
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN ++ C + L++A+ + +M + L P YN L+ C L+ A +L +
Sbjct: 657 TYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTL 716
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
Y +I G+++ AL FH M+E+G Y++++ LC+ +
Sbjct: 717 QDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLI 776
Query: 522 QAAFEVFNKSVNHDV 536
A F + H +
Sbjct: 777 TDAKFFFCMMLTHGI 791
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/488 (19%), Positives = 205/488 (42%), Gaps = 55/488 (11%)
Query: 56 INPYLLTHHSLALGFFNWASQQPNFTH-----------SPLSYHSILKSLSLSRQINAID 104
+NP L+T+ L G + + +F S ++Y +L SL S +I+
Sbjct: 371 LNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAV 430
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCED-IGPE--ICNSLL 161
+L +++V + D Y +I L + ++A ++ E+ C I P +C++++
Sbjct: 431 ILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEM---CSKRIYPNSFVCSAII 487
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
+ L G I A FD ++ V I + + I + AKLG + + ++
Sbjct: 488 SGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGY---AKLGNIGEAVRSYKQIIEK 544
Query: 222 MINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
I+ +++ +I+GFCK ++ EA K+LD +++ P + Y + + G +
Sbjct: 545 GISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSM 604
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+L + + P Y + GL E R+ E+ +L
Sbjct: 605 FDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQL---------------------- 642
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+M +G P T + + ++ CK + + +++ + +
Sbjct: 643 ------------LKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSP 690
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+YNV+++ LC G L++A ++ ++ + + Y ++++A C + ++ A + Q
Sbjct: 691 VTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQ 750
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M G +++ Y+ +I++ + I A F ML G+ PD +L + +
Sbjct: 751 MVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGD 810
Query: 521 LQAAFEVF 528
+ FE+F
Sbjct: 811 PNSVFEIF 818
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 151/319 (47%), Gaps = 30/319 (9%)
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
+V+ ++ + + + V +A VL ++++ + Y + + +++ V
Sbjct: 168 NVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWD---VYN 224
Query: 286 KKRKLGVAPRTNDYREFIL--GLIVERRICEA---------KELGEVIVSGKFTIDDDVL 334
+ + GV P+ N+Y IL GL + R+ +A +E G +VS
Sbjct: 225 EIKASGV-PQ-NEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVS---------F 273
Query: 335 NALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
NAL+ + S+D + FF MI+ G +P + + + L LC +E +E +
Sbjct: 274 NALMSGFCKMGSVDVAKS--FFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDM 331
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+ D+ +YN++ + G + A+ V+Q M GL+PD+ Y L+ C+ +
Sbjct: 332 ENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNI 391
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
+ KL ++M + G ++ TY +L+S + G I+ A+ L H M G+ PD TY+ L
Sbjct: 392 EESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVL 451
Query: 512 LEGLCQETNLQAAFEVFNK 530
+ GLC+ ++ A E++ +
Sbjct: 452 IHGLCKRGAVEEAIELYEE 470
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%)
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LC++++ + V + ++ + S+N ++S C G + A M + G
Sbjct: 241 LIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYG 300
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L PDV YN L+ C + A + + M G ++ TYNIL + F +G I GA
Sbjct: 301 LLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAW 360
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
++ ML G+ PD TYT L+ G CQ N++ +F++ K ++ + L+ + + SL
Sbjct: 361 KVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSL 420
Query: 551 CR 552
C+
Sbjct: 421 CK 422
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 154/387 (39%), Gaps = 42/387 (10%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
L+Y ++ L + + +++ +I +S V II L + +A F+
Sbjct: 446 LTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDS 505
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
V + D+ EI N ++ A G I A++ + ++ +G+ + + F I+ FC+
Sbjct: 506 VTKS--DVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKK 563
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
KL + + +LD ++ + ++ SV +++G+C+ + F +L E+ + KP I
Sbjct: 564 GKLAEAVKLLDTIKV--HGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI 621
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y +V + G + E +LK G+ P Y I + +A +L +
Sbjct: 622 TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQM 681
Query: 323 VSGKFTIDDDVLNALIGSV------------------------------------SSIDP 346
+ N LI + + D
Sbjct: 682 LQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDV 741
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
++A+VFF+ M+E+G ++ S + LCKRN + + ++ + D + VM
Sbjct: 742 QNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVM 801
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDP 433
++ SG + + M + GL P
Sbjct: 802 LNAFHRSGDPNSVFEIFAMMIKCGLLP 828
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 420 YGVIQEMKRKGLDPDVSFYNS-LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
+ V E+K G+ P + N L++ CR+ L+ A + ++ ++N L+S
Sbjct: 220 WDVYNEIKASGV-PQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMS 278
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
F ++G ++ A F M++ G+ PD +Y LL GLC +++ A E N NH V
Sbjct: 279 GFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGV 336
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 13/148 (8%)
Query: 397 FTDMESYNVMVSFL-CTSGR---LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
F D + NV+ L C R + +A V+ +MK L ++ YNSL+ LR
Sbjct: 161 FRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYN------LR 214
Query: 453 PAKKLWD---QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
+WD ++ ASG N T ILI ++ A+ + P ++
Sbjct: 215 HTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFN 274
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+L+ G C+ ++ A F + + ++
Sbjct: 275 ALMSGFCKMGSVDVAKSFFCMMIKYGLL 302
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 201/457 (43%), Gaps = 18/457 (3%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVK--VNKITLDSSV-YRFIIPSLIQGKNTQ 136
F+H P IL S N ID + +N L S + + II S+++ K+
Sbjct: 48 FSHCPKQNAKILSSF------NGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCP 101
Query: 137 KAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
A S+ ++ F + + P I + + G + A + + RG + + I
Sbjct: 102 VAISLLKQMVF--KGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTT 159
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
+ C N ++ + + D V + M+ V +I+G CK R +AF++L E+
Sbjct: 160 VMKGLCINGEVQKAMDFHDNVAAQ--GMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEG 217
Query: 255 RECKPDFIAYRIVAEEF-KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+ KP+ + Y ++ + F K + R++ LK +G+ P Y I G +
Sbjct: 218 QVVKPNIVIYNMIIDSFCKDELTCKARDLYLKI-VDMGIDPDILTYTSLIRGFCRTGQWG 276
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR-SAIVFFNFMIEKGRVPTLSTLSNLS 372
E K+L +V+ + N LI + A FN M+++G+ P + T + L
Sbjct: 277 EVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLI 336
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
C E +++ + D+ SY +++ C R+ EA + EM+ K +
Sbjct: 337 SGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMV 396
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
D+ Y+SL++ C+ + A +L+ + G N+ TYNILI F ++ +I+ + L
Sbjct: 397 LDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIEL 456
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
F M KG+ P TY L+ G C+ ++ A + +
Sbjct: 457 FKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLS 493
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 180/412 (43%), Gaps = 9/412 (2%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN ++ +++K L ++ ++ V + LD Y +I L + +
Sbjct: 151 QPN----NITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSI 206
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
AF + E++ I N ++ D A ++ ++ G++ + + I
Sbjct: 207 DAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLI 266
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIR 255
FC + G+V ++ E+ N IN +V ++I FC+ ++ EA + + + R
Sbjct: 267 RGFCRTGQWGEVKQLMCEM---VNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKR 323
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
+PD + + + L G+V E + + G+ P Y I+G +RI EA
Sbjct: 324 GQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEA 383
Query: 316 KELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
L + +D + ++LI G S A F+ + G P + T + L
Sbjct: 384 VSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDA 443
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
CK D +E++K++ + +YN++++ C S R+REA ++ M+ K L PD
Sbjct: 444 FCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPD 503
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
YNSL + C+ + A +L+ M G ++ TYN+L+ F + ++
Sbjct: 504 SITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 159/359 (44%), Gaps = 8/359 (2%)
Query: 201 ENAKLGQVLSMLDEVRKRENSMIN----GSVIAV-LIIHGFCKGKRVEEAFKVLDELRIR 255
+NAK+ + +D+ N +IN SVI II K K A +L ++ +
Sbjct: 54 QNAKILSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFK 113
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
P I + +G + VL K G P + GL + + +A
Sbjct: 114 GVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKA 173
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRV--PTLSTLSNLSK 373
+ + + + +D+ LI + I RS F +G+V P + + +
Sbjct: 174 MDFHDNVAAQGMLLDEVCYGTLINGLCKIG-RSIDAFQLLQEMEGQVVKPNIVIYNMIID 232
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
+ CK + + ++Y + D+ +Y ++ C +G+ E ++ EM K ++P
Sbjct: 233 SFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINP 292
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+V +N L++A CR+ + A+ +++ M G ++ T+N LIS G + A +LF
Sbjct: 293 NVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLF 352
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ E+G+ PD +YT L+ G C+ + A +FN+ +++L + S+ + LC+
Sbjct: 353 DTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCK 411
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 92/209 (44%), Gaps = 43/209 (20%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A ++++G P TL+ + K LC + + ++ + ++A D Y +++
Sbjct: 138 AFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLIN 197
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC GR +A+ ++QEM+ + + P++ YN ++++ C+++L A+
Sbjct: 198 GLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARD------------ 245
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL----QAA 524
L+ +++ G+ PD TYTSL+ G C+ Q
Sbjct: 246 -----------------------LYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLM 282
Query: 525 FEVFNKSVNHDVMLARSILSTFMISLCRR 553
E+ NK++N +V ++ F CR+
Sbjct: 283 CEMVNKNINPNVYTFNVLIDAF----CRK 307
>gi|357484175|ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513709|gb|AES95332.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/552 (21%), Positives = 237/552 (42%), Gaps = 82/552 (14%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVN-KITLDSSVYR 123
S AL F WAS FTHS +Y +++ L + R+ + + +L ++ + ++
Sbjct: 52 SEALQTFRWASTFSKFTHSQSTYRTLIHKLCIFRRFDTVKQLLDEMPTSIGANPGEDIFI 111
Query: 124 FIIPSLIQGKNTQKAFSVFN-EVKFNCEDIGPEICNSLLAVLASDGYIDNALKMF-DEMS 181
I+ L + T++ +V + KF+ +I NS+L VL + ID A + + M
Sbjct: 112 TIVRGLSRAGMTRRVITVLDLAYKFHGTP-SLKIFNSILDVLVKED-IDMAREFYRKSMM 169
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
GV FG+ + C ++G+ +L ++ N + +VI ++H C+ +
Sbjct: 170 ESGVRGDDYTFGILMKGLCLTNRIGEGFKLLQLIKN--NGVTPNTVIYNTLLHALCRNGK 227
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
V A +++E+ P+ + + I+ + ++ + V+L+K L + P +
Sbjct: 228 VGRARSLMNEM----VDPNEVTFNILISSYYKEENLVQALVLLEKCFALSLVPDVVTVTK 283
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKG 360
+ L R+ EA E+ E + S ++D N LI + + + F M KG
Sbjct: 284 VVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFLKQMENKG 343
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
+P + T + L C+ D ++++ + + + +++ M+ LC+ GR+ + +
Sbjct: 344 YLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTMIRGLCSEGRIEDGF 403
Query: 421 GVIQEMK--RKGLDPDVSFYNSLM----------EAC----------------------- 445
+++ M+ ++G +S YNS++ EA
Sbjct: 404 SILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAKMGKLFPRAVDRSMTIIQK 463
Query: 446 CREDLLRPAKKLWDQMFASG-----------------------------------CSGNL 470
C+E + AK ++D+M G C
Sbjct: 464 CKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINEMISNNCFPIA 523
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
T+N +I++F E G+IE AL+ ++ +G P+ TY+ L++ LC++ ++Q A +VF +
Sbjct: 524 STFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDVLCRKGDIQKALQVFLE 583
Query: 531 SVNHDVMLARSI 542
V ++ + I
Sbjct: 584 MVEKGILPDQCI 595
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 84/189 (44%), Gaps = 4/189 (2%)
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES-YNVMVSFLCTSGRLREAYGVIQE 425
T +L + + + S E ++ ++ S FT +S Y ++ LC R ++ E
Sbjct: 37 TQDHLCQLILDQKTSSEALQTFRWASTFSKFTHSQSTYRTLIHKLCIFRRFDTVKQLLDE 96
Query: 426 MKRK-GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
M G +P + +++ R + R + D + + +LK +N ++ +
Sbjct: 97 MPTSIGANPGEDIFITIVRGLSRAGMTRRVITVLDLAYKFHGTPSLKIFNSILDVLVK-E 155
Query: 485 EIEGALRLFH-NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
+I+ A + +M+E GV D T+ L++GLC + F++ N+ V I
Sbjct: 156 DIDMAREFYRKSMMESGVRGDDYTFGILMKGLCLTNRIGEGFKLLQLIKNNGVTPNTVIY 215
Query: 544 STFMISLCR 552
+T + +LCR
Sbjct: 216 NTLLHALCR 224
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 165/377 (43%), Gaps = 11/377 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+A + +D+AL++F +S G + + + I + ++ + + DE
Sbjct: 303 NILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL- 361
Query: 218 RENSMINGSVIA-VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
VI+ +I G KR++EA ++ ++L+ C P+ +AY V + G
Sbjct: 362 --------DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGR 413
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ + + P Y I GL + + +A ++ E +V D
Sbjct: 414 IEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTT 473
Query: 337 LIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI S A + M+ KG PT T ++ CK + +E EV +
Sbjct: 474 LIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERG 533
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ + ++S+ + GR EAY V+ EM +G PDV Y SL++ + A+
Sbjct: 534 CEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEAR 593
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
++D M GC+ + TY +I FS++G +E A + M + GV PD Y SL++G
Sbjct: 594 HVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGY 653
Query: 516 CQETNLQAAFEVFNKSV 532
+ + AF V+++ V
Sbjct: 654 VKLERVDQAFGVYDRMV 670
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 191/482 (39%), Gaps = 72/482 (14%)
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEIC--NSLLAV 163
LK++ + D ++ L + + KA +F E+ CE P I N++++
Sbjct: 8 LKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCE---PTIVSYNTVISG 64
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
LAS +D A K F+ M G E I F I FC+ + +L++ KR +
Sbjct: 65 LASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDV 124
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
+ +IHG+CK ++ FK+L+E+ C PD AY ++ + +G V E +
Sbjct: 125 ---FLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYEL 181
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
++ RK G + I L ++ EA EL
Sbjct: 182 FERMRKSGCLGDYVTFMTLIEALSNHGKLDEACEL------------------------- 216
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ MIE+G P L +L LCK K DE E+Y+ + A T +Y
Sbjct: 217 ---------YREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAY 267
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N ++ C GR+ + ++ +M PD+ YN L+ R + L A +L+ + +
Sbjct: 268 NSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSS 327
Query: 464 SGCSGNLKTYNILISKF-----------------------------SEVGEIEGALRLFH 494
GC N TY +I ++ I+ A LF
Sbjct: 328 YGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFE 387
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRV 554
+ G +P+ YT++++GL + ++ + F + R+ + + LC+
Sbjct: 388 KLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQ 447
Query: 555 LI 556
++
Sbjct: 448 ML 449
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 210/498 (42%), Gaps = 62/498 (12%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY +++K L+ S++I+ + +++K + + Y +I L++ + F
Sbjct: 364 ISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNF-- 421
Query: 145 VKFNCEDIGPEIC-------NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
ED+ C ++ L + +A K+F++M +G TI + I
Sbjct: 422 -----EDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLID 476
Query: 198 KFCENAKLGQVLSMLDEVRKR---ENSMINGSVIAVLIIHGFCK---------------- 238
F + +K+ + +LD + + ++ GS I+HGFCK
Sbjct: 477 GFSKASKMDEARKLLDVMLTKGPEPTAVTYGS-----IVHGFCKLDMINEAKEVIAQMRE 531
Query: 239 -------------------GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
R EEA++VL E+ R C PD I Y + + G V E
Sbjct: 532 RGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPE 591
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
V + G AP Y I + A E+ E++ D N+L+
Sbjct: 592 ARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMD 651
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK-VLSANDYF 397
G V A ++ M+ G P T + L L K K+D ++K +L ++
Sbjct: 652 GYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVP 711
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
+ SY +++ L +GR+ EA+ QEM +G+ P+ Y SL+ + + + AKKL
Sbjct: 712 PTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKL 771
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL-- 515
+ M G + +++ Y+ LI+ + ++ A +F M+++G AP+ TY L G
Sbjct: 772 VEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRA 831
Query: 516 -CQETNLQAAFEVFNKSV 532
+ +L+A + F++ V
Sbjct: 832 AGRALDLEAVKQHFSQGV 849
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 136/300 (45%), Gaps = 1/300 (0%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I+ CK KR+++A ++E+ R KPD Y V V E ++ +K K
Sbjct: 15 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 74
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAI 350
+ P Y I GL RI A EL + + + + N LI G D +A
Sbjct: 75 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 134
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
F+ M+ VP + T + L L K K EV + ++ +Y+ ++
Sbjct: 135 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 194
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C R+ EA+ ++++M +G+ P V YN L+ + CR D L A KL+ M C +
Sbjct: 195 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 254
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TYN L+ +++GA RL+ M+ KG PDA TY +L GL + + A E+ K
Sbjct: 255 VTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEK 314
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 143/328 (43%), Gaps = 38/328 (11%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
ID+AL +EM+ RG++ + + C+ K+ + + +++ K+ IN +V+
Sbjct: 25 IDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR---INPNVVT 81
Query: 230 V-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+I+G CK R+E A+++ E+ + P ++Y + + F + + V K
Sbjct: 82 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 141
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS 348
+ P Y I GL SGK +VL+
Sbjct: 142 RSNCVPNVVTYTTLIDGLSK---------------SGKVQAAAEVLDG------------ 174
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
M++KG P ++T S L CK + DE ++ + + + +YN++++
Sbjct: 175 -------MVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLN 227
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC + +L +A+ + + M ++ P V YN+L+ A C L A +L+ +M A GC
Sbjct: 228 SLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPP 287
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNM 496
+ TY+ L + G++ A L M
Sbjct: 288 DAITYDTLAWGLTRAGKVHEAQELMEKM 315
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 118/248 (47%), Gaps = 29/248 (11%)
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT 364
G IVER +C+ K IDD + + I P + I +NF++
Sbjct: 13 GPIVER-LCKTKR-----------IDDALATVEEMATRGIKPDAFI--YNFVLS------ 52
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
LC+ K +E +++ + ++ +YN +++ LC + R+ AY + +
Sbjct: 53 ---------GLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFK 103
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
EM KG P YN+L++ C++ L AK ++D+M S C N+ TY LI S+ G
Sbjct: 104 EMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSG 163
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILS 544
+++ A + M++KGV P+ TY+ L++G C+ + A ++ + V + +
Sbjct: 164 KVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYN 223
Query: 545 TFMISLCR 552
+ SLCR
Sbjct: 224 ILLNSLCR 231
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 148/352 (42%), Gaps = 42/352 (11%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
L+Y I++ L +++I+ + ++++ I D+ +Y F++ L Q + ++A +F
Sbjct: 10 LTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFE- 68
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
K + I P + N+L+ L I+ A ++F EM+ +G + + +
Sbjct: 69 -KMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSY---------- 117
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
N++I+G FCK K + A V D++ C P+ +
Sbjct: 118 -----------------NTLIDG----------FCKKKDLVAAKDVFDKMVRSNCVPNVV 150
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + G V VL K GV P Y I G RR+ EA +L E +
Sbjct: 151 TYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQM 210
Query: 323 VSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
V+ N L+ S+ D A F M ++ PT+ T + L + LC +
Sbjct: 211 VTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQL 270
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
D +Y + A D +Y+ + L +G++ EA ++++MK +P
Sbjct: 271 DGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 322
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 2/194 (1%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P T + + LCK + D+ + + ++ D YN ++S LC ++ EA +
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
++M ++ ++P+V YN+L+ C+ + A +L+ +M G +YN LI F +
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
++ A +F M+ P+ TYT+L++GL + +QAA EV + V V +
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186
Query: 543 LSTFMISLC--RRV 554
S + C RRV
Sbjct: 187 YSCLIDGFCKVRRV 200
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/523 (22%), Positives = 224/523 (42%), Gaps = 13/523 (2%)
Query: 30 WTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHS 89
W LE + L LR L P LV V+ + +AL FF W+ +Q + H P+ Y
Sbjct: 33 WNHKLEGKMRHL-LR-GLKPRLVCAVLLSQ--SDERVALDFFFWSDRQWRYRHDPIVYCV 88
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
+L LS ++ VL+ + I + ++ S + + A V ++
Sbjct: 89 MLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMMQKAG 148
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ +CN+ + VL ++ AL+ + M G+ + + + I +C+ ++ +
Sbjct: 149 IEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAM 208
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGF-CKGKRVEEAFKVLDELRIRECKPDFIAYRIVA 268
++ E+ + S S V+ GF CK +R+ E V++++ + D + Y +
Sbjct: 209 ELISEMPLKGCSPDKVSYYTVM---GFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLI 265
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFT 328
E L++ +K G Y + E R+ +AKE+ + +
Sbjct: 266 HMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCI 325
Query: 329 IDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
D A+I S + A M + G P + + K LC++ S E E+
Sbjct: 326 PDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREM 385
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
K + + +Y+V++ G+L +A V++EM KG P N L+++ CR
Sbjct: 386 MKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCR 445
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+ AKK ++ GC+ N + +I +F + +IE AL L +M PDA T
Sbjct: 446 IGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVT 505
Query: 508 YTSLLEGLCQETNLQAAFEV----FNKSVNHDVMLARSILSTF 546
YT++++ L ++ ++ A E+ K ++ + R+++ +
Sbjct: 506 YTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRY 548
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 162/378 (42%), Gaps = 15/378 (3%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+++ L + I + + ++M + + + I C++ + L L E +KR
Sbjct: 228 TVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKR 287
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+ A I+ +CK R+++A ++++E+ R C PD + Y + F G V
Sbjct: 288 GFQVDKVGYSA--IVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVG 345
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
+ +L++ K G P T Y F+ GL + EA+E+ + +T NA+
Sbjct: 346 QARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTP-----NAIT 400
Query: 339 GSVSSIDPR------SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
SV R A MI KG PT ++ L ++LC+ + DE + +
Sbjct: 401 YSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECL 460
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ ++ ++ C + A ++ +M PD Y ++++A ++ +
Sbjct: 461 NMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIE 520
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A +L +M G TY +I ++ ++G +E L L ML + T + ++
Sbjct: 521 EATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQEC--RTAFNQVI 578
Query: 513 EGLCQETNLQAAFEVFNK 530
E LC NL+AA ++ K
Sbjct: 579 EKLCTFGNLEAADKLLGK 596
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 156/396 (39%), Gaps = 42/396 (10%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG---QVLSMLDEVR 216
+L VL+ A ++ M RG++ + F + + KL QVL+M+ +
Sbjct: 89 MLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMMQKAG 148
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
N ++ + I VL++ +E+A + L+ +++ P+ + Y + + + +
Sbjct: 149 IEPNLLVCNTAIHVLVMANM-----LEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHR 203
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
V + ++ + G +P Y + L RRI E ++ E + K D N
Sbjct: 204 VEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNT 263
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
LI LCK +DE ++ + +
Sbjct: 264 LI----------------------------------HMLCKHQHADEALQFLREAQKRGF 289
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D Y+ +V C GR+ +A ++ EM +G PDV Y +++ + + A+K
Sbjct: 290 QVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARK 349
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ QM+ GC N +Y + + G A + E+ P+A TY+ ++ G
Sbjct: 350 MLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFR 409
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+E L A +V + + ++ + SLCR
Sbjct: 410 REGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCR 445
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 103/498 (20%), Positives = 208/498 (41%), Gaps = 63/498 (12%)
Query: 56 INPYLLTHHSLALGFFNWA---------SQQPNFTHSP--LSYHSILKSLSLSRQINAID 104
I P ++T++ L G+ + S+ P SP +SY++++ L +R+I +
Sbjct: 184 IMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVM 243
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK---FNCEDIGPEICNSLL 161
V+++++ K+ D Y +I L + ++ +A E + F + +G ++++
Sbjct: 244 DVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGY---SAIV 300
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
+G +D A ++ +EM RG + + I F + ++GQ ML ++ K +
Sbjct: 301 DSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYK--HG 358
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
+V + G C+ EA +++ + P+ I Y +V F+ G + +
Sbjct: 359 CKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDAC 418
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE--------------VIVSGKF 327
V+++ G P + + L R+ EAK+ E V +F
Sbjct: 419 DVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRF 478
Query: 328 TIDDDVLNAL------------------------IGSVSSIDPRSAIVFFNFMIEKGRVP 363
DD+ AL +G I+ + + M++KG P
Sbjct: 479 CQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLK--MLKKGIDP 536
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVY-KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
T T + + + ++L+ + K+L+ + T ++N ++ LCT G L A +
Sbjct: 537 TPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQECRT---AFNQVIEKLCTFGNLEAADKL 593
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ ++ R D + + LME+ R+ + A K+ +MF+ +LK + K +
Sbjct: 594 LGKVLRTASRIDANTCHVLMESYLRKGIPLSAYKVACRMFSRSLIPDLKLCEKVCKKLMQ 653
Query: 483 VGEIEGALRLFHNMLEKG 500
G+ E A LF +E+G
Sbjct: 654 EGKSEEADNLFLRFVERG 671
>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
Length = 845
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/503 (21%), Positives = 216/503 (42%), Gaps = 36/503 (7%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+++++L + +L + + I D Y +I ++ AF +F +
Sbjct: 220 TFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSRDAFKMFEGM 279
Query: 146 -KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ CE P + N L+ VL +G + A ++FDEM+ G++ +TI F V I + ++
Sbjct: 280 HRSGCE---PTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDGYAKS 336
Query: 203 AKLGQVLSMLDEVRKR---------------------------ENSMINGSVIAV---LI 232
++ Q + E++ R ++ M + + A ++
Sbjct: 337 GQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHDHDMFSSHMSADGLDML 396
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
+ C R+++A+++L + + + + G E + + KLG+
Sbjct: 397 VCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYRIMNKLGL 456
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVF 352
AP ++ + I+GL + R+ EA+ L E +VS + + L + A+
Sbjct: 457 APSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDAYFRDGNAVGALKC 516
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
++ M G S LC+ + +E + + +++ + +YN ++S LC
Sbjct: 517 WDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCK 576
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
+G + EA ++Q M++ GL PD+ N L++ CRE L+ L M ++G + + T
Sbjct: 577 AGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVT 636
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YN +I+ + ++ A+ + ML G PD TY + LC+ L A ++ ++ V
Sbjct: 637 YNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQAGKLLDELV 696
Query: 533 NHDVMLARSILSTFMISLCRRVL 555
D +T M +C VL
Sbjct: 697 AVDCSPNSVTYNTLMDGICSDVL 719
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
R+A F M +G P+L+T + + C R + ++ + D+ SYN++
Sbjct: 200 RAAWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNIL 259
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ C G R+A+ + + M R G +P V YN L++ C E + A++L+D+M G
Sbjct: 260 IKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGI 319
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
N T+N+LI +++ G+++ A + M +G+ PD+ T+
Sbjct: 320 QVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTF 361
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 91/424 (21%), Positives = 166/424 (39%), Gaps = 73/424 (17%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G + A +F+EM+ G S F + FC + +L + K S I V
Sbjct: 197 GEVRAAWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGK---SGIAPDV 253
Query: 228 IAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
+ ++I G C +AFK+ + + C+P + Y I+ + G + E + +
Sbjct: 254 CSYNILIKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDE 313
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEA----KEL---GEVIVSGKFTI---------- 329
++G+ T + I G ++ +A +E+ G V S F I
Sbjct: 314 MAQVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGY 373
Query: 330 ------DDDVLNALIGSVSSIDPRSAIVFFNF-----------MIEKGRVPTLSTLSNLS 372
D D+ ++ + S +D + ++ IE+G ++ + L
Sbjct: 374 AAQLVHDHDMFSSHM-SADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALI 432
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK--- 429
K +E E+Y++++ ++N ++ LC GRL EA +++ M K
Sbjct: 433 AAYSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYC 492
Query: 430 -------------------------------GLDPDVSFYNSLMEACCREDLLRPAKKLW 458
GL D +++ + CR D + A + +
Sbjct: 493 LSTSFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAF 552
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M + G N TYN +IS + G + AL+L NM + G+ PD T L++GLC+E
Sbjct: 553 AEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCRE 612
Query: 519 TNLQ 522
L+
Sbjct: 613 GKLK 616
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%)
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
V++ ++A + ++N M+ C G +R A G++ M + G+ PDV YN L++ C
Sbjct: 205 VFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHC 264
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
R A K+++ M SGC + TYNIL+ G + A RLF M + G+ +
Sbjct: 265 VFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTI 324
Query: 507 TYTSLLEGLCQETNLQAAFEVFNK 530
T+ L++G + + A + +
Sbjct: 325 TFNVLIDGYAKSGQMDQASAAYRE 348
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 133/352 (37%), Gaps = 42/352 (11%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L + G +D A + + M +G ST F + + + + L D++
Sbjct: 464 NYLIMGLCNQGRLDEAQLLLEHMVSKGYCLST-SFTICLDAYFRDGNAVGALKCWDDM-- 520
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
N + IA I+G C+ V EA++ E+ R P+ I Y + G+
Sbjct: 521 -GNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGN 579
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ E +++ R+ G+ P I GL E ++ L + S T D N
Sbjct: 580 MTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNT 639
Query: 337 LIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
+I + + D SA+ F N M+ G P D
Sbjct: 640 IINAYCRAQDMNSAMNFMNKMLVAGCEP-------------------------------D 668
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
FT YN+ + LC + L +A ++ E+ P+ YN+LM+ C D+L A
Sbjct: 669 IFT----YNIWMHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGIC-SDVLDRAM 723
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
L ++ N T N+ +S F + G AL + E D T
Sbjct: 724 ILTGRLIKMAFKPNTITLNVFLSHFCKQGFGNRALMWAEKLREDSFVFDGAT 775
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 113/279 (40%), Gaps = 4/279 (1%)
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ A R+ F G E VL + R+ G P + + L + A + E
Sbjct: 148 YCALRLALHAFLAAGMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFE 207
Query: 321 VIVSGKFTIDDDVLNA-LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+ + NA L+G R A M + G P + + + L K C
Sbjct: 208 EMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFG 267
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
S + ++++ + + + +YN++V LC GR+ EA + EM + G+ + +N
Sbjct: 268 WSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFN 327
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
L++ + + A + +M A G + T+NI+ ++ + G L H+M
Sbjct: 328 VLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFG-YAAQLVHDHDMFSS 386
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
++ D L+ LC + L A+E+ ++ V L
Sbjct: 387 HMSADGLDM--LVCRLCWDHRLDDAWELLLGAIEQGVPL 423
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 179/399 (44%), Gaps = 7/399 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N ++A + G +A+++FDEM+ R V + I + I + L S+ D++
Sbjct: 200 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVC 259
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + ++ +++ G C+ R+ E +LDE+ ++ PD Y I+ + G
Sbjct: 260 --HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 317
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFIL--GLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ K K GV DY IL GL + ++ A+E+ + +V+ + N
Sbjct: 318 KAMLSLFGKSLKNGVT--IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYN 375
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
LI G + + A F M + P T + L LCK + ++ + N
Sbjct: 376 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 435
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+E++N ++ +G+L + + V+ EM+ GL P+V Y S++ A C+ + A
Sbjct: 436 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 495
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+ D MF N + YN +I + E G + A L M G++P TY L++G
Sbjct: 496 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 555
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
LC ++ + A E+ N NH ++ +T + + C R
Sbjct: 556 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYR 594
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/461 (20%), Positives = 195/461 (42%), Gaps = 14/461 (3%)
Query: 51 LVARVINPYLLTHHSLALGFFNWASQQPNFT-----------HSPLSYHSILKSLSLSRQ 99
+ R + P +T++++ G + F+ + ++Y+ +L L + +
Sbjct: 222 MTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGR 281
Query: 100 INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS 159
+ ++L ++ K+ D Y + L + +++ S+F + N IG C+
Sbjct: 282 MGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSI 341
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL L DG + A ++ + + G+ + + + I +C+ +L S +++ R
Sbjct: 342 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 401
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+ + +I+G CK +R+ A +L E++ P + + + + G + +
Sbjct: 402 --IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 459
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+VL + ++ G+ P Y + +I EA + + + + V NA+I
Sbjct: 460 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 519
Query: 340 SVSSIDPR-SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
+ P A + M G P++ T + L K LC +++ E E+ LS +
Sbjct: 520 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 579
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D SYN ++S C G + +A + Q M + G+ V Y+ L+ L + L+
Sbjct: 580 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLY 639
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+M + + +NI++ +S+ G A L ML+K
Sbjct: 640 QKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 680
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 171/425 (40%), Gaps = 7/425 (1%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFD 178
Y +I I+G + + FS+ +++ C + P N LL+ L G + + D
Sbjct: 233 TYNTMIDGHIKGGDLEAGFSLRDQMV--CHGLKPNAITYNVLLSGLCRAGRMGETSALLD 290
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
EM+ + + + + N +LS+ + K N + G ++++G CK
Sbjct: 291 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLK--NGVTIGDYTCSILLNGLCK 348
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+V A +VL L P + Y + + G + + + + P
Sbjct: 349 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHIT 408
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMI 357
Y I GL RI A++L + + N LI + + + M
Sbjct: 409 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 468
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
E G P + + ++ CK K E V + + D + + YN ++ G
Sbjct: 469 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPND 528
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+A+ ++++MK G+ P + YN L++ C + + A+++ + + + +YN LI
Sbjct: 529 QAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 588
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
S G I+ AL L M + G+ TY L+ GL L ++ K + ++V+
Sbjct: 589 SACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVV 648
Query: 538 LARSI 542
+ +I
Sbjct: 649 PSNAI 653
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
SYNV+++ + +GR +A V EM + + P+ YN++++ + L L DQM
Sbjct: 198 SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQM 257
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G N TYN+L+S G + L M + + PD TY+ L +GL + +
Sbjct: 258 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 317
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+A +F KS+ + V + S + LC+
Sbjct: 318 KAMLSLFGKSLKNGVTIGDYTCSILLNGLCK 348
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 3/175 (1%)
Query: 346 PRSAIVFFNFMIEKGR--VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
P A+ + + ++ R +P+LS+ + L + L + ++ + +L++ D ++
Sbjct: 104 PDGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAW 163
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF-YNSLMEACCREDLLRPAKKLWDQMF 462
N V +G L EA G+++ M R G P +F YN ++ R A +++D+M
Sbjct: 164 NKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMT 223
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
N TYN +I + G++E L M+ G+ P+A TY LL GLC+
Sbjct: 224 ERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCR 278
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 125/577 (21%), Positives = 228/577 (39%), Gaps = 86/577 (14%)
Query: 47 LSPSLVARVINPYLLTHHSL--ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAID 104
LSP L A + + H + FF W S++P + H+ + S+L L R D
Sbjct: 69 LSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPAD 128
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
+ ++ + K + R + L + FS+++ CN+LL L
Sbjct: 129 HI--RILMIKACRNEEEIRRVADFLNEISGMGFGFSLYS-------------CNTLLIQL 173
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK-------LGQVLS------- 210
A ++ A ++ +M + G++ S + F I + K L Q+
Sbjct: 174 AKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDV 233
Query: 211 ------MLDEVRKRENSMING-------------SVIAVLIIHGFCKGKRVEEAFKVLDE 251
+L R R + G SV +I+G C RV+EA +L+E
Sbjct: 234 FTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEE 293
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL----- 306
+ + +P Y + + E ++ + +K G P Y I GL
Sbjct: 294 MIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK 353
Query: 307 ---------------IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS--------- 342
+V + + E+ V G+F+ + + + G S
Sbjct: 354 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 413
Query: 343 -------SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
D A+V F M++ G +PT+ T + L + + + ++ N
Sbjct: 414 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 473
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D +YN +VS G+L A QEM GL+P+ Y +L++ ++ + A
Sbjct: 474 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIAL 533
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L +M GC+ N+++YN +I+ S+ A ++ M+E+G+ P+ TYT+L++GL
Sbjct: 534 SLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGL 593
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
C+ Q AF++F+ + S+ + LC+
Sbjct: 594 CRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ 630
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 206/467 (44%), Gaps = 17/467 (3%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +++ LS ++ + ++ + ++ Y +I L G A +F+ +
Sbjct: 340 TYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM 399
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + + N ++ L G I+ A+ +F++M G + + + I + +
Sbjct: 400 EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNV 459
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+LD ++ EN ++ GF K ++E A E+ P+ ++Y
Sbjct: 460 NNAARLLDLMK--ENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYT 517
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + G V +LK+ ++G P Y I GL E R EA+++ + +V
Sbjct: 518 ALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQ 577
Query: 326 KFTIDDDVLNALIGSVSSIDPRSAIVF--FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ LI + + R+ F F+ M ++ +P L T S+L LC+ K+DE
Sbjct: 578 GLLPNVITYTTLIDGLCR-NGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 636
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ ++ +++Y+ +VS LC GR EA ++++MK +G PD Y SL+
Sbjct: 637 AERMSEIGCE----PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLI 692
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
A C+ + A K++ + A G +L Y LI + G++E A LF NMLEK
Sbjct: 693 AHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNA 752
Query: 504 DATTYTSLLEGLCQETNLQAAFEV--------FNKSVNHDVMLARSI 542
D +T L++GL +E L ++ F ++ V+L R +
Sbjct: 753 DEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGREL 799
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/536 (21%), Positives = 213/536 (39%), Gaps = 67/536 (12%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S L++++++ LS ++ + +L Q+ ++ D Y +I + +N AF VF
Sbjct: 197 SLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVF 256
Query: 143 NE-VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ VK C D ++L+ L ++G +D AL M +EM +G+E + + + I C
Sbjct: 257 DRMVKEGC-DPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCA 315
Query: 202 NAKLGQVLSMLDEVRKR---------------------------------ENSMINGSVI 228
+ + ++ ++KR + ++ +V
Sbjct: 316 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVT 375
Query: 229 AVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+I+ C G R A K+ + + Y + + L G + + V+ +K
Sbjct: 376 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 435
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-R 347
K+G P Y I G + + + A L +++ D+ N L+ S
Sbjct: 436 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 495
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
SA +F M+E G P + + L K K D + + K + ++ESYN ++
Sbjct: 496 SASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVI 555
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM------ 461
+ L R EA + +M +GL P+V Y +L++ CR + A K++ M
Sbjct: 556 NGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL 615
Query: 462 -----FAS--------------------GCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
++S GC L TY+ L+S G A +L +M
Sbjct: 616 PNLYTYSSLIYGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDM 675
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
E+G PD Y SLL C+ + A ++F+ L SI + +LC+
Sbjct: 676 KERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCK 731
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/401 (19%), Positives = 154/401 (38%), Gaps = 40/401 (9%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++++ +N +L +K N D Y ++ + + A F E
Sbjct: 444 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 503
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + P +L+ + DG +D AL + M G + + I + +
Sbjct: 504 MVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENR 563
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ + D++ E ++ + +I G C+ R + AFK+ ++ R+C P+ Y
Sbjct: 564 FSEAEKICDKMV--EQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTY 621
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ G E E + ++G P + Y + GL + R EA++L
Sbjct: 622 SSLIYGLCQEGKADEAE----RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQL------ 671
Query: 325 GKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ D M E+G P +L CK + D
Sbjct: 672 ----VKD------------------------MKERGFCPDREIYYSLLIAHCKNLEVDHA 703
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
++++ + A + + Y ++ LC +G++ EA + M K + D + L++
Sbjct: 704 LKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDG 763
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
+E L KL M + + N++TY IL + S +G+
Sbjct: 764 LLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGK 804
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 200/487 (41%), Gaps = 75/487 (15%)
Query: 47 LSPSLVARVIN-----PYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQIN 101
L+PS+ A + P + AL FF W +++P F H+ S+ ++L+ L+ R
Sbjct: 46 LAPSVTAAHVADLFRAPVAPLDPATALAFFEWVARRPGFRHTAASHAALLQLLARRRA-- 103
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLL 161
+ Y ++ S++ +T ED+ E +++
Sbjct: 104 -----------------PANYDKLVVSMVSCSDTA-------------EDM-REAVDAIQ 132
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
A+ G + A + M G + + + I CE + + L +L V ++
Sbjct: 133 AIRRVGGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLL--VMMVQDG 190
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
L+I G CK R+ A +VL+E+ +R P Y + + + G
Sbjct: 191 CSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSG------ 244
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
+ K LG+ ++ER C DD N LI +
Sbjct: 245 ---RMKDALGIKA------------LMERNGCNP--------------DDWTYNILIYGL 275
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
P A N I +G PT+ T +N+ CK + D+ + V + +++ D++
Sbjct: 276 CGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQ 335
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y V+++ L R +EA + EM GL P+V Y S+++ C+ + A +++ M
Sbjct: 336 AYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLM 395
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
GC N TY+ LI + ++ A+ L M E G+ P TYT+L++G C++
Sbjct: 396 EHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEF 455
Query: 522 QAAFEVF 528
AF +F
Sbjct: 456 DNAFRLF 462
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/490 (21%), Positives = 199/490 (40%), Gaps = 23/490 (4%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
FT + +++ +I+ + +I+ V + + LD Y +I LI+ ++A
Sbjct: 294 GFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEA 353
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+E+ N I S++ G + AL++F M H G + + I+
Sbjct: 354 KETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYG 413
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
++ KL + ++++ + +E+ + G + +I G CK + AF++ + +
Sbjct: 414 LIQDQKLHKAMALI--TKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLT 471
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD AY ++ G E L +K GV Y + G A L
Sbjct: 472 PDEQAYNVLTHALCKSGRAEEAYSFLVRK---GVVLTKVTYTSLVDGFSKAGNTDFAAVL 528
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
E +V+ D + L+ ++ A+ + M G + + + + K
Sbjct: 529 IEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIK 588
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
K D ++ + ++ + +Y V +S C G++ EA +I EM+R G+ PDV
Sbjct: 589 EGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVT 648
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG------------- 484
YN + C + A +M + C N TY IL+ F ++
Sbjct: 649 YNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMW 708
Query: 485 ---EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
E++ +L M++ G+ P A TY+S++ G C+ T L+ A +F+ D+
Sbjct: 709 NWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEE 768
Query: 542 ILSTFMISLC 551
I T +I C
Sbjct: 769 IY-TMLIKCC 777
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 185/476 (38%), Gaps = 56/476 (11%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y SI+ ++ A V + ++ ++ Y +I LIQ + KA ++ +++
Sbjct: 372 YTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQ 431
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
+ G +L+ DNA ++F+ M G+ + V C++ +
Sbjct: 432 EDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAE 491
Query: 207 QVLSMLDEVRK-------RENSMING-------SVIAVLI------------------IH 234
+ S L VRK S+++G AVLI +
Sbjct: 492 EAYSFL--VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQ 549
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
CK K++ EA +LD++ + K + +AY I+ E G + + + G P
Sbjct: 550 ALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKP 609
Query: 295 RTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFF 353
Y FI +I EA+ L GE+ G + DV+ + VF
Sbjct: 610 SATTYTVFISSYCKIGQIEEAEHLIGEMERDG---VAPDVV-------------TYNVFI 653
Query: 354 NFMIEKGRVP-TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
N G + STL + C+ N + + L + ++++ V S +
Sbjct: 654 NGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLK----MSLVDAHYVDTSGMWN 709
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
L + +++ M + GL+P Y+S++ C+ L A L+D M S N +
Sbjct: 710 WIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEI 769
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
Y +LI ++ A+ +M+E G P +Y L+ GLC E + A +F
Sbjct: 770 YTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLF 825
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 204/474 (43%), Gaps = 19/474 (4%)
Query: 88 HSILKSLSLSRQI-NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
+ +LK L ++++ A+D ++K++ T D Y ++ K ++A + + +
Sbjct: 133 NQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMA 192
Query: 147 FNCEDIGPEICNSLLAVLA---SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ P S V+ ++G +D A +F EM RG++ + + + I C+
Sbjct: 193 DSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQ 252
Query: 204 KL----GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ G M+D+ K +N N +IHG+ + +E ++L+E+ KP
Sbjct: 253 VVDRAEGVFQQMIDKGVKPDNDTYN------CLIHGYLSIGKWKEVVRMLEEMSAHGLKP 306
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D Y + G E + G+ P Y I G + + E +L
Sbjct: 307 DCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLL 366
Query: 320 EVIVSGKFTIDDDVLNALIGSVSS---IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
++V + D + N + + + ID A+ FN M ++G P + L LC
Sbjct: 367 NLMVENGLSPDHHIFNIIFTAYAKKAMID--EAMHIFNKMKQQGLSPDVVNFGALIDALC 424
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K + D+ V + + ++ +N +V LCT + +A EM +G+ PDV
Sbjct: 425 KLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVV 484
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
F+N+++ C + + A++L D M G ++ +Y LI VG I+ A + M
Sbjct: 485 FFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVM 544
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
L G+ PD TY +LL G C+ + A+ VF + + + + ST + L
Sbjct: 545 LSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGL 598
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 179/418 (42%), Gaps = 41/418 (9%)
Query: 140 SVFNEVKFNCE-DIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
S+FN + C + P++C L+ G +++ F + G + I +
Sbjct: 77 SLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLL 136
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL---R 253
C+ +L + + +L + R E V ++ GFC KR EEA ++L + +
Sbjct: 137 KGLCDAKRLREAMDILIK-RMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQ 195
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
R C P+ ++Y V F G V + + + G+ P Y I GL C
Sbjct: 196 GRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGL------C 249
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+A+ +D + F MI+KG P T + L
Sbjct: 250 KAQ--------------------------VVDRAEGV--FQQMIDKGVKPDNDTYNCLIH 281
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
K E+V + + +SA+ D +Y ++++LC +GR REA M RKG+ P
Sbjct: 282 GYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKP 341
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+V+ Y L+ + L L + M +G S + +NI+ + +++ I+ A+ +F
Sbjct: 342 NVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIF 401
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+ M ++G++PD + +L++ LC+ + A FN+ +N V + ++ + LC
Sbjct: 402 NKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLC 459
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/458 (20%), Positives = 201/458 (43%), Gaps = 17/458 (3%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN ++Y +++ L ++ ++ + V +Q+ + D+ Y +I + +
Sbjct: 235 QPNV----VTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWK 290
Query: 137 KAFSVFNE-----VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+ + E +K +C G SLL L ++G A FD M +G++ +
Sbjct: 291 EVVRMLEEMSAHGLKPDCYTYG-----SLLNYLCNNGRCREARFFFDSMIRKGIKPNVAI 345
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+G+ I + L ++ +L+ + EN + I +I + K ++EA + ++
Sbjct: 346 YGILIHGYATKGALSEMHDLLNLMV--ENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNK 403
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
++ + PD + + + + +G V + + + GVAP + + GL +
Sbjct: 404 MKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSN 370
+AKE +++ D N ++ ++ + A + M G P + + +
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTT 523
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L C + DE + V+ + D +YN ++ C +GR+ +AYGV +EM R G
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+ P V Y++++ AK+L+ M SG N+ YNI+++ S+ ++ A
Sbjct: 584 ITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAF 643
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+LF ++ K + TT+ ++ L + + A +F
Sbjct: 644 KLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLF 681
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/486 (20%), Positives = 203/486 (41%), Gaps = 28/486 (5%)
Query: 75 SQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN 134
SQ + + +SY +++ Q++ ++ ++ I + Y +I L + +
Sbjct: 194 SQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQV 253
Query: 135 TQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+A VF ++ + N L+ S G ++M +EMS G++ +G
Sbjct: 254 VDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGS 313
Query: 195 FIWKFCENAKLGQVLSMLDE-VRK--RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ C N + + D +RK + N I G ++IHG+ + E +L+
Sbjct: 314 LLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYG-----ILIHGYATKGALSEMHDLLNL 368
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ PD + I+ + + E + K ++ G++P ++ I L R
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGR 428
Query: 312 ICEA-----KELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTL 365
+ +A + + E + F V N+L+ + ++D A F+ M+ +G P +
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIF-----VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDV 483
Query: 366 STLSNLSKNLCKRN---KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
+ + NLC + K+ L+++ + + D+ SY ++ C GR+ EA
Sbjct: 484 VFFNTILCNLCTKGQVMKAQRLIDLMERVGTR---PDVISYTTLIGGHCLVGRIDEAAKS 540
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ M GL PD YN+L+ CR + A ++ +M +G + + TY+ ++
Sbjct: 541 LDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFT 600
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
A L+ NM+ G + Y +L GL + + AF++F + D L
Sbjct: 601 TRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLE--- 657
Query: 543 LSTFMI 548
++TF I
Sbjct: 658 ITTFNI 663
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 110/487 (22%), Positives = 197/487 (40%), Gaps = 79/487 (16%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y ++ + ++ + +L + N ++ D ++ I + + +A +FN++K
Sbjct: 346 YGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMK 405
Query: 147 FNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC---- 200
+ + P++ N +L+ L G +D+A+ F++M + GV + F ++ C
Sbjct: 406 Q--QGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463
Query: 201 -ENAK---------------------------LGQVLSMLDEVRKRENSMINGSVIA-VL 231
E AK GQV+ + E VI+
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTT 523
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I G C R++EA K LD + KPD Y + + G + + V ++ + G
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583
Query: 292 VAPRTNDYREFILGLIVERRICEAKELG-EVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
+ P Y + GL RR EAKEL +I SGK + I
Sbjct: 584 ITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK--------------------QWNI 623
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+N + L+ LSKN C DE ++++ L + D+ ++ ++N+M+ L
Sbjct: 624 WIYNII-----------LNGLSKNNC----VDEAFKLFQSLCSKDFQLEITTFNIMIGAL 668
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
SGR +A + + GL PDV Y + E E L L+ M SG + N
Sbjct: 669 FKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNS 728
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE------TNLQAA 524
+ N L+ + G+I A + EK + +A+T L+ L ++ T+L
Sbjct: 729 RMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEK 788
Query: 525 FEVFNKS 531
+ V N++
Sbjct: 789 YRVLNEA 795
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/276 (19%), Positives = 121/276 (43%), Gaps = 40/276 (14%)
Query: 321 VIVSGKFTIDDDVLNALI-GSVSSIDPRSAI-VFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+I+ + +++ V+N L+ G + R A+ + M E G P + + + L K C
Sbjct: 119 LILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNE 178
Query: 379 NKSDELVEVYKVLSANDYFT---DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
+++E +E+ +++ + + ++ SY +++ T G++ +AY + EM +G+ P+V
Sbjct: 179 KRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNV 238
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL--- 492
Y ++++ C+ ++ A+ ++ QM G + TYN LI + +G+ + +R+
Sbjct: 239 VTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEE 298
Query: 493 --------------------------------FHNMLEKGVAPDATTYTSLLEGLCQETN 520
F +M+ KG+ P+ Y L+ G +
Sbjct: 299 MSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGA 358
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
L ++ N V + + I + + ++ +I
Sbjct: 359 LSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMI 394
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 171/406 (42%), Gaps = 64/406 (15%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L G + +AL +FD+M HRG S + + + + C+ + Q + +LDE+R
Sbjct: 164 NPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRS 223
Query: 218 RE--------NSMIN--------GSVIAVL-----------------IIHGFCKGKRVEE 244
+ N +IN G + VL ++ C +R EE
Sbjct: 224 KGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEE 283
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A K+L ++ +C PD + + V G V VL + + G P Y +
Sbjct: 284 ADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMD 343
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT 364
GL ERR+ EA +L L L+ M+ K +P
Sbjct: 344 GLCKERRVDEAIKL---------------LKELLAE---------------MVSKNCIPD 373
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV-SFLCTSGRLREAYGVI 423
T + + +LC++ D ++V +S + D+ +YN +V FLC S + EA ++
Sbjct: 374 QVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLL 433
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
M GL PD + Y SL RED + A ++ ++ A G S + YN ++ +
Sbjct: 434 NLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKK 493
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ A+ F M+ G PD +TY L+EG+ E L+ A E+
Sbjct: 494 WRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLG 539
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 182/447 (40%), Gaps = 41/447 (9%)
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
L+Q A + + + + +D CN L+ L +DG + +A ++ + + G
Sbjct: 70 GLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL---GPSA 126
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF----------- 236
+ I + + +C + M+D V ++ +I L + G
Sbjct: 127 TIITYNTMVNGYCRAGNIDAARRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDM 186
Query: 237 -------------------CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
CK ++A +LDE+R + C+PD + Y ++ G V
Sbjct: 187 LHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDV 246
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E VL G P Y + L R EA +L + S D+ NA+
Sbjct: 247 GEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAV 306
Query: 338 IGSVS--SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA-- 393
I S+ R+ V M E G P + T S++ LCK + DE +++ K L A
Sbjct: 307 ITSLCQKGFVGRATKVLAQ-MSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEM 365
Query: 394 --NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA-CCREDL 450
+ D ++N +++ LC G A V+ EM G PD++ YN +++ C+
Sbjct: 366 VSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCK 425
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
A L + M ++G + TY L S E+E A+ +F + G++PD Y +
Sbjct: 426 TEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNA 485
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVM 537
+L GLC++ A + F V++ M
Sbjct: 486 ILLGLCKKWRTDLAIDFFAYMVSNGCM 512
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 154/331 (46%), Gaps = 17/331 (5%)
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
+ G + ++ A +++ + P I I+ ++ G V + E V++ LG
Sbjct: 68 LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEA---LGP 124
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS----IDPRS 348
+ Y + G I A+ + I S F D N LI ++ +D
Sbjct: 125 SATIITYNTMVNGYCRAGNIDAARRM---IDSVPFAPDTFTYNPLIRALCVRGCVLD--- 178
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F+ M+ +G P++ T S L CK + + V + + + D+ +YNV+++
Sbjct: 179 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLIN 238
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
+C+ G + EA V+ + G PD Y ++++ C + A KL +MF++ C+
Sbjct: 239 AMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAP 298
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF--- 525
+ T+N +I+ + G + A ++ M E G PD TY+S+++GLC+E + A
Sbjct: 299 DEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLL 358
Query: 526 -EVFNKSVNHDVMLARSILSTFMISLCRRVL 555
E+ + V+ + + + +T + SLC++ L
Sbjct: 359 KELLAEMVSKNCIPDQVTFNTIITSLCQKGL 389
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 153/318 (48%), Gaps = 12/318 (3%)
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRE--CKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+IA ++ GFC+ KR +EA +L R E C PD +Y I+ + G + + +L
Sbjct: 147 IIANHLLKGFCEAKRTDEALDILLH-RTPELGCVPDVFSYSILLKSLCDQGKSGQADDLL 205
Query: 285 KKKRKLGV--APRTNDYREFILGLIVERRICEA----KELGEVIVSGKFTIDDDVLNALI 338
+ + G +P Y I G E + +A KE+ + + F V++AL
Sbjct: 206 RMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALC 265
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
++D A F M+ KG +P T +NL + E V V+K +
Sbjct: 266 -KARAMDKAEA--FLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILP 322
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D+ ++N+++ LC G+++EA V M KG +PDV YN ++ + L L+
Sbjct: 323 DVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF 382
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
D M G + + T+N+LI ++ G ++ A+ +F+ M + GV P+ TYT+++ LC+
Sbjct: 383 DLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRI 442
Query: 519 TNLQAAFEVFNKSVNHDV 536
+ A E FN+ ++ V
Sbjct: 443 GKMDDAMEKFNQMIDQGV 460
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/536 (20%), Positives = 224/536 (41%), Gaps = 21/536 (3%)
Query: 13 ISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPS--LVARVINPYLLTHH-SLALG 69
I++A SA+ R+ PA G R LSP+ A +++ H LAL
Sbjct: 74 IARAPSSAACRSGPALAVALFNRAASRAQGPR-VLSPTSHTYAILMDCCTRAHRPELALA 132
Query: 70 FFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSL 129
FF + ++ H + R A+D +L + D Y ++ SL
Sbjct: 133 FFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSL 192
Query: 130 I-QGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVE 186
QGK+ Q A + + P++ N+++ +G ++ A +F EM RG+
Sbjct: 193 CDQGKSGQ-ADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP 251
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-----IIHGFCKGKR 241
+ + + C+ + + + L + M+N V+ +I+G+ +
Sbjct: 252 PDFVTYSSVVHALCKARAMDKAEAFLRQ-------MVNKGVLPNNWTYNNLIYGYSSTGQ 304
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+EA +V E+R + PD + + ++ G + E V G P Y
Sbjct: 305 WKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 364
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKG 360
+ G + + + +L ++++ N LI + ++ A++ FN M + G
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P + T + + LC+ K D+ +E + + D +Y+ ++ CT G L +A
Sbjct: 425 VKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAK 484
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+I E+ G+ D+ ++S++ C+ + A+ ++D G Y++L+ +
Sbjct: 485 ELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGY 544
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
VG++E ALR+F M+ G+ P+ Y +L+ G C+ + +F + + +
Sbjct: 545 CLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 600
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 200/461 (43%), Gaps = 25/461 (5%)
Query: 78 PNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS-VYRFIIPSLIQGKNTQ 136
P+F ++Y S++ +L +R ++ ++ L+Q+ VNK L ++ Y +I +
Sbjct: 252 PDF----VTYSSVVHALCKARAMDKAEAFLRQM-VNKGVLPNNWTYNNLIYGYSSTGQWK 306
Query: 137 KAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+A VF E++ + I P++ N L+ L G I A +FD M+ +G + +
Sbjct: 307 EAVRVFKEMRR--QSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 364
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI------IHGFCKGKRVEEAFKV 248
+ + L + + D ++ G IA +I I + +++A +
Sbjct: 365 MLNGYATKGCLVDMTDLFD--------LMLGDGIAPVICTFNVLIKAYANCGMLDKAMII 416
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
+E+R KP+ + Y V +G + + + GVAP Y I G
Sbjct: 417 FNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCT 476
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLST 367
+ +AKEL I++ +D + +++I ++ + A F+ + G PT
Sbjct: 477 HGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVV 536
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
S L C K ++ + V+ + + + Y +V+ C GR+ E + +EM
Sbjct: 537 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREML 596
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
+KG+ P YN +++ PAK + +M SG + N TY+I++ + +
Sbjct: 597 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD 656
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
A+ LF + V D T +++ G+ Q ++ A ++F
Sbjct: 657 EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 697
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 187/439 (42%), Gaps = 15/439 (3%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV--YRFIIPSLIQGKNTQKAFSVF 142
SY +LKSL + D +L+ + V Y +I + + KA +F
Sbjct: 183 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLF 242
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E+ I P+ +S++ L +D A +M ++GV + + I+ +
Sbjct: 243 KEMVQ--RGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYS 300
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + + + E+R++ S++ V +++ CK +++EA V D + ++ PD
Sbjct: 301 STGQWKEAVRVFKEMRRQ--SILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 358
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL----IVERRICEAK 316
+Y I+ + G + + + G+AP + I ++++ +
Sbjct: 359 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFN 418
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
E+ + V V+ AL + +D A+ FN MI++G P L + C
Sbjct: 419 EMRDHGVKPNVLTYTTVIAALC-RIGKMD--DAMEKFNQMIDQGVAPDKYAYHCLIQGFC 475
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+ E+ + N D+ ++ +++ LC GR+ +A + GL P
Sbjct: 476 THGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAV 535
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
Y+ LM+ C + A +++D M ++G N Y L++ + ++G I+ L LF M
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM 595
Query: 497 LEKGVAPDATTYTSLLEGL 515
L+KG+ P Y +++GL
Sbjct: 596 LQKGIKPSTILYNIIIDGL 614
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 115/569 (20%), Positives = 215/569 (37%), Gaps = 88/569 (15%)
Query: 28 RKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWAS---QQPNFTHSP 84
R+ TP+LE+ L+ + +PS A P +LA+ FN A+ Q P SP
Sbjct: 57 RRGTPVLERDLNGFLAAIARAPSSAACRSGP------ALAVALFNRAASRAQGPRVL-SP 109
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
S+ Y ++ + + A + F +
Sbjct: 110 TSH---------------------------------TYAILMDCCTRAHRPELALAFFGQ 136
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTI----GFGVFIWKFC 200
+ + I N LL D AL D + HR E + + + + C
Sbjct: 137 LLRTGLRVDIIIANHLLKGFCEAKRTDEAL---DILLHRTPELGCVPDVFSYSILLKSLC 193
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ K GQ +L + ++ + V+A +I GF K V +A + E+ R P
Sbjct: 194 DQGKSGQADDLL-RMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPP 252
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA---- 315
DF+ Y V ++ + E L++ GV P Y I G + EA
Sbjct: 253 DFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVF 312
Query: 316 KEL----------------GEVIVSGKFTIDDDVLNALIGSVSSID------------PR 347
KE+ G + GK DV + + + D +
Sbjct: 313 KEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATK 372
Query: 348 SAIV----FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+V F+ M+ G P + T + L K D+ + ++ + + ++ +Y
Sbjct: 373 GCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTY 432
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+++ LC G++ +A +M +G+ PD Y+ L++ C L AK+L ++
Sbjct: 433 TTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMN 492
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
+G ++ ++ +I+ ++G + A +F + G+ P A Y+ L++G C ++
Sbjct: 493 NGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEK 552
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCR 552
A VF+ V+ + + T + C+
Sbjct: 553 ALRVFDAMVSAGIEPNDVVYGTLVNGYCK 581
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 169/391 (43%), Gaps = 12/391 (3%)
Query: 136 QKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
KA +FNE++ + + P + +++A L G +D+A++ F++M +GV +
Sbjct: 411 DKAMIIFNEMRDH--GVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
I FC + L + ++ E+ N M V+ II+ CK RV +A + D
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMN--NGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTV 526
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
P + Y ++ + + L+G + + V G+ P Y + G RI
Sbjct: 527 NVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRID 586
Query: 314 EAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
E L ++ + N +I G + A V F+ M E G T S +
Sbjct: 587 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 646
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
+ L K DE + ++K L A + D+ + N M++ + + R+ EA + + R GL
Sbjct: 647 RGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV 706
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P V Y+ ++ +E L+ A+ ++ M +GC + + N ++ + + EI A
Sbjct: 707 PCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAY 766
Query: 493 FHNMLEKGVAPDATTYTSLLE-----GLCQE 518
+ E+ + + T L++ G C+E
Sbjct: 767 LSKIDERNFSLEHLTTMLLVDLFSSKGTCRE 797
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 170/400 (42%), Gaps = 37/400 (9%)
Query: 150 EDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
+ I P IC N L+ A+ G +D A+ +F+EM GV+ + + + I C K+
Sbjct: 388 DGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKM-- 445
Query: 208 VLSMLDEVRKRENSMINGSVIA-----VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
D+ ++ N MI+ V +I GFC + +A +++ E+ D +
Sbjct: 446 -----DDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 500
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
+ + +G V + + + +G+ P Y + G + ++ +A + + +
Sbjct: 501 LFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAM 560
Query: 323 VSGKFTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
VS +D V L+ + ID + F M++KG P+ + L N+
Sbjct: 561 VSAGIEPNDVVYGTLVNGYCKIGRID--EGLSLFREMLQKGIKPS-TILYNII------- 610
Query: 380 KSDELVEVYKVLSANDYFTDME---------SYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
D L E + + A F +M +Y++++ L + EA + +E++
Sbjct: 611 -IDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMN 669
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+ D+ N+++ + + AK L+ + SG + TY+I+I+ + G +E A
Sbjct: 670 VKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAE 729
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+F +M G PD+ ++ L ++ + A +K
Sbjct: 730 DMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSK 769
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 205/455 (45%), Gaps = 17/455 (3%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
S + +L LS S + S K + V ++ Y +I L + + + A S+F E+
Sbjct: 218 SCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEM 277
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
K + + P+I NSL+ G + A+ +F+EM G E I + I FC+
Sbjct: 278 K--AKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFE 335
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
++ Q L +++R + V +I FCK + EA K ++ +P+
Sbjct: 336 RIPQAFEYLHGMKQR--GLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFT 393
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + +G + E + + ++ GV Y + GL + R+ EA+EL ++
Sbjct: 394 YTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALL 453
Query: 324 SGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+T++ + +L G + + A+ M +K P L LC++N+ +
Sbjct: 454 KAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIE 513
Query: 383 ELVEVYKV-----LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ + V + L+AN Y Y ++ G+ EA ++QEM+ G+ V
Sbjct: 514 DSMAVIREMMDCGLTANSYI-----YTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVT 568
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
Y L++ C+ L++ A + +D M +G N+ Y LI + +E A LF+ ML
Sbjct: 569 YGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEML 628
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
+KG++PD YTSL++G + N A + N+ V
Sbjct: 629 DKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMV 663
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 167/396 (42%), Gaps = 38/396 (9%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N ++ LA +G ++ A +F+EM +G+ + + I + + L +S+ +E++
Sbjct: 255 NMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMK- 313
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
++ VI +I+ FCK +R+ +AF+ L ++ R +P+ + Y + + F G
Sbjct: 314 --DAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGM 371
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ E ++G+ P Y I C+ +L E F ++ +
Sbjct: 372 LLEANKFFVDMIRVGLQPNEFTYTSLI------DANCKIGDLNEA-----FKLESE---- 416
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
M + G + T + L LC+ + E E++ L +
Sbjct: 417 -------------------MQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGW 457
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ + Y + + + +A +++EM +K L PD+ Y + + CR++ + +
Sbjct: 458 TLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMA 517
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ +M G + N Y LI + +VG+ A+ L M + G+ TY L++GLC
Sbjct: 518 VIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLC 577
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ +Q A F+ + + I + + LC+
Sbjct: 578 KIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCK 613
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 131/291 (45%), Gaps = 1/291 (0%)
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C+P F + + +G + E K K V P+ E + L + A
Sbjct: 177 CRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLAL 236
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ +V + N +IG ++ D +A F M KG P + T ++L
Sbjct: 237 SFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGY 296
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
K V V++ + D+ +YN +++ C R+ +A+ + MK++GL P+V
Sbjct: 297 GKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNV 356
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y++L++A C+ +L A K + M G N TY LI ++G++ A +L
Sbjct: 357 VTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESE 416
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
M + GV + TYT+LL+GLC++ ++ A E+F + L + I ++
Sbjct: 417 MQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSL 467
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ FF M+ G P++ T + + L + + +++ + A D+ +YN ++
Sbjct: 235 ALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLID 294
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
G L A V +EMK G +PDV YNSL+ C+ + + A + M G
Sbjct: 295 GYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQP 354
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ TY+ LI F + G + A + F +M+ G+ P+ TYTSL++ C+ +L AF++
Sbjct: 355 NVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLE 414
Query: 529 NKSVNHDVMLARSILSTFMISLC 551
++ V L + + LC
Sbjct: 415 SEMQQAGVNLNIVTYTALLDGLC 437
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 115/264 (43%), Gaps = 1/264 (0%)
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-A 349
G++P Y I L E + A+ L E + + D N+LI + + A
Sbjct: 246 GLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGA 305
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ F M + G P + T ++L CK + + E + ++ +Y+ ++
Sbjct: 306 VSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDA 365
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
C +G L EA +M R GL P+ Y SL++A C+ L A KL +M +G + N
Sbjct: 366 FCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLN 425
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ TY L+ E G + A LF +L+ G + YTSL G + ++ A ++
Sbjct: 426 IVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILE 485
Query: 530 KSVNHDVMLARSILSTFMISLCRR 553
+ ++ + T + LCR+
Sbjct: 486 EMNKKNLKPDLLLYGTKIWGLCRQ 509
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/557 (21%), Positives = 240/557 (43%), Gaps = 48/557 (8%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
KW E+ + L L+ + LV +V++ + + FF WA ++ +F H +Y
Sbjct: 73 KWGSDAEKAIEVLKLK--VDHRLVHQVLD--IDVEIRAKIQFFKWAGKRQHFQHDSTTYM 128
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
++++ L S ++ + ++ + + ++ + + I+ L + K KA SVF ++K
Sbjct: 129 ALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVFYQIKGR 188
Query: 149 CEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG-VEFSTIGFGVFIWKFCENAKLGQ 207
+ + N+L+ +L +G+ + ++++E+ G TI + I F + +
Sbjct: 189 KCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDF 248
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
+ DE++ EN + I I+ + K +VE A ++++E++ + C P Y +
Sbjct: 249 AFRLFDEMK--ENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTEL 306
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
+ +G V + + K G P I L R+ +A +L + S +
Sbjct: 307 IKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQC 366
Query: 328 TIDDDVLNALIGSV--SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS---- 381
+ N +I ++ S A ++F M G P+ T + L CK N+
Sbjct: 367 APNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKAL 426
Query: 382 ----------------------DELVEVYKVLSANDYFTDMES---------YNVMVSFL 410
D L + +AN+ F +++ Y VM+
Sbjct: 427 LLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHF 486
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
GRL +A + E ++ G PDV YN+LM R ++ A L M +GC+ ++
Sbjct: 487 GNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDI 546
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN- 529
K++NI+++ ++ G + A+ +F M E + PDA +Y ++L L + + A ++
Sbjct: 547 KSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMRE 606
Query: 530 ---KSVNHDVMLARSIL 543
K +D + SIL
Sbjct: 607 MKLKGFEYDSITYSSIL 623
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 138/638 (21%), Positives = 250/638 (39%), Gaps = 114/638 (17%)
Query: 5 PATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLR--DSLSPSLVARVINPYLLT 62
P +L RI++ +I RP Q+LH L + D L+ SL+ R L
Sbjct: 38 PHPELLDRITRLLI----LNRP---------QSLHNLTFKYSDHLTDSLLRR-----LRL 79
Query: 63 HHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVK----------- 111
H S L FF+ A+Q ++ LSY +L L+ +R +VL+Q+
Sbjct: 80 HPSACLSFFHLATQNSHYRPHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAY 139
Query: 112 ---------VNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLA 162
+ S V+ ++ + + T+ A VF+E+ G C+ LL
Sbjct: 140 AVCNHVFSVYKEFGFCSGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLG 199
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE--- 219
L G A+ +FD++ G+ + + C+ ++ + +L+++ K
Sbjct: 200 KLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEP 259
Query: 220 -----NSMINGS-------------------------VIAVLIIHGFCKGKRVEEAFKVL 249
N ++NG V +++ G+CK +++EA K+L
Sbjct: 260 NVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLL 319
Query: 250 ------------------------------DELRIRE------CKPDFIAYRIVAEEFKL 273
D +RIR+ K + + + + +
Sbjct: 320 REVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCK 379
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
+G V E E V + P Y + G E ++ +A L E ++ T
Sbjct: 380 LGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVT 439
Query: 334 LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
N +I G V A+ ++ M+E+G P + + K SD + ++K +
Sbjct: 440 YNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEIL 499
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ ++N M+S LC G+L EA V MK GL PD Y +L + C+ ++
Sbjct: 500 GRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQ 559
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A ++ M S +++ YN LI ++ ++ L M +G++P+ TY +L+
Sbjct: 560 EAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLI 619
Query: 513 EGLCQETNLQAA----FEVFNKSVNHDVMLARSILSTF 546
G C E L A FE+ + +V++ I+S+
Sbjct: 620 SGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSL 657
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 204/461 (44%), Gaps = 14/461 (3%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
+G +W N SY+++L +++ + +++ + IT Y +I
Sbjct: 391 VGMVDW-----NLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIK 445
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
L+ + A +++ + C ++L G D A+ ++ E+ RG
Sbjct: 446 GLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTK 505
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
ST+ F I C+ KL + ++ D R +E + + + G+CK V+EAF+
Sbjct: 506 STVAFNTMISGLCKMGKLMEAGAVFD--RMKELGLSPDEITYRTLSDGYCKNGNVQEAFQ 563
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
+ + + Y + + + + + +L + + G++P Y I G
Sbjct: 564 IKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWC 623
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLS 366
E+++ +A L ++ FT + V + ++ S+ D S A V + M++ L+
Sbjct: 624 DEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLD---FDILA 680
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES---YNVMVSFLCTSGRLREAYGVI 423
+ S L K + + E ++ L +D + + YN+ + LC SG+L EA V+
Sbjct: 681 VHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVL 740
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+ +G PD Y +L+ AC + A KL D+M G N+ YN LI+ ++
Sbjct: 741 SVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKL 800
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G I+ A RLF+ + +KG+ P+A TY L+ C+ +L A
Sbjct: 801 GNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKA 841
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 175/416 (42%), Gaps = 37/416 (8%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ G + ++ MS RGV + + + + +C+ K+ + +L EV +
Sbjct: 265 NGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEE 324
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E +++ V VL+ G+C+ R+E+A ++ DE+ K + + + + + +G V
Sbjct: 325 DELLVVDERVYGVLV-DGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQV 383
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E E V + P Y + G E ++ +A L E ++ T N +
Sbjct: 384 CEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTV 443
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G V A+ ++ M+E+G P + + K SD + ++K + +
Sbjct: 444 IKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGF 503
Query: 397 FTDMESYNVMVSFLCTSGR-----------------------------------LREAYG 421
++N M+S LC G+ ++EA+
Sbjct: 504 TKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQ 563
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+ M+R+ + + YNSL++ + L L +M G S N+ TY LIS +
Sbjct: 564 IKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWC 623
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ +++ A L+ M+E+G P+ + ++ L ++ + A + +K ++ D++
Sbjct: 624 DEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDIL 679
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/402 (19%), Positives = 167/402 (41%), Gaps = 15/402 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+LL +G + A + +EM G+ + + + I + L + + +
Sbjct: 406 NTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVE 465
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R + + ++ F K + A + E+ R +A+ + MG +
Sbjct: 466 R--GVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKL 523
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E V + ++LG++P YR G + EA ++ V+ + ++ N+L
Sbjct: 524 MEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSL 583
Query: 338 IGSVSSIDPRSAIVFFNFMIE---KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
I + I + + + ++E +G P + T L C K D+ +Y +
Sbjct: 584 IDGLFKIRKLNDVT--DLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIER 641
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV-SFYNSLMEACCREDLLRP 453
+ ++ + +VS L R+ EA ++ +M LD D+ + +N + + DL
Sbjct: 642 GFTPNVVVCSKIVSSLYRDDRISEATVILDKM----LDFDILAVHNKCSDKLVKNDLTLE 697
Query: 454 AKKLWDQMFASGCSGNLK---TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
A+K+ D + S +L YNI I + G+++ A + ++ +G PD TY +
Sbjct: 698 AQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCT 757
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L+ N+ AF++ ++ + ++ +I + + LC+
Sbjct: 758 LIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCK 799
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 164/399 (41%), Gaps = 56/399 (14%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
FT S +++++++ L ++ +V ++K ++ D YR + + N Q+A
Sbjct: 502 GFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEA 561
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
F + ++ E+ NSL+ L +++ + EM RG+ + + +G I
Sbjct: 562 FQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISG 621
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
+C+ KL + + E+ +R V+ I+ + R+ EA +LD++
Sbjct: 622 WCDEQKLDKAFHLYFEMIER--GFTPNVVVCSKIVSSLYRDDRISEATVILDKM------ 673
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND---------YREFILGLIVE 309
+ + I+A K + + ++ L+ ++ +++ Y I GL
Sbjct: 674 ---LDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKS 730
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTL 368
++ EA+ + V++S F D+ LI + S S + A + M+EKG +P ++
Sbjct: 731 GKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITI- 789
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
YN +++ LC G + A + ++ +
Sbjct: 790 ----------------------------------YNALINGLCKLGNIDRAQRLFYKLYQ 815
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
KGL P+ YN L+ CR L A +L ++M G S
Sbjct: 816 KGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGIS 854
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 98/207 (47%), Gaps = 1/207 (0%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+ A+ F+ M GRVP L + S L L ++ + V V+ + D+ +++
Sbjct: 173 KHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIV 232
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
V+ C GR+ A V+++M ++GL+P+V YN L+ +++ M G
Sbjct: 233 VNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGV 292
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG-VAPDATTYTSLLEGLCQETNLQAAF 525
S N+ T +L+ + + G+++ A +L + E + D Y L++G CQ ++ A
Sbjct: 293 SRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAV 352
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCR 552
+ ++ + + + I +T + C+
Sbjct: 353 RIRDEMLRVGLKVNMVICNTLIKGYCK 379
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/505 (23%), Positives = 223/505 (44%), Gaps = 45/505 (8%)
Query: 49 PSL-VARVINPYLLTHHSLAL------GFFNWASQQPNFTHSPLSYHSILKSLSLSRQIN 101
PSL V V++ L+ H+ L+L FF + S QP F + +Y + + L++
Sbjct: 78 PSLSVHHVVD--LINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFLAVHEMFT 135
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEI--- 156
S+++ V V++ +S+ FI SL++ + T + + + D+G P+
Sbjct: 136 EAQSLIELV-VSRKGKNSASSVFI--SLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQC 192
Query: 157 ---------------CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
C +LL + + E+ G + F + + KFC+
Sbjct: 193 FRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCK 252
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + DE+ KR + +V++ +I+G+CK ++E F++ ++ +PD
Sbjct: 253 EGNISDAQKVFDEITKRS---LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPD 309
Query: 261 FIAY----RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
Y + +E K+ G+ + + K G+ P + I G I K
Sbjct: 310 VFTYSALINALCKENKMDGA----HGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMK 365
Query: 317 ELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
E + ++S D + N L+ G + D +A + MI +G P T + L
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C+ + +E+ K + N D ++ +V +C GR+ +A ++EM R G+ PD
Sbjct: 426 CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDD 485
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y +M+A C++ + KL +M + G ++ TYN+L++ ++G+++ A L
Sbjct: 486 VTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDA 545
Query: 496 MLEKGVAPDATTYTSLLEGLCQETN 520
ML GV PD TY +LLEG + N
Sbjct: 546 MLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 102/200 (51%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F+ + ++ PT+ + + L CK DE + + + D+ +Y+ +++ LC
Sbjct: 263 FDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCK 322
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
++ A+G+ EM ++GL P+ + +L+ R + K+ + +M + G ++
Sbjct: 323 ENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVL 382
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YN L++ F + G++ A + M+ +G+ PD TYT+L++G C+ +++ A E+ +
Sbjct: 383 YNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMD 442
Query: 533 NHDVMLARSILSTFMISLCR 552
+ + L R S + +C+
Sbjct: 443 QNGIELDRVGFSALVCGMCK 462
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 1/217 (0%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN-LCKRNKSDELVEVYKVLSAND 395
L+ + ++P I F I P + N+ N CK + +V+ ++
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ S+N +++ C G L E + + +M++ PDV Y++L+ A C+E+ + A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L+D+M G N + LI S GEI+ + ML KG+ PD Y +L+ G
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
C+ +L AA + + + + + +T + CR
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR 427
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 89/182 (48%), Gaps = 4/182 (2%)
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
NL + K N + + Y + + ++ +N++++ C G + +A V E+ +
Sbjct: 209 GNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITK 268
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
+ L P V +N+L+ C+ L +L QM S ++ TY+ LI+ + +++G
Sbjct: 269 RSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDG 328
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSILS 544
A LF M ++G+ P+ +T+L+ G + + E + +K + D++L ++++
Sbjct: 329 AHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Query: 545 TF 546
F
Sbjct: 389 GF 390
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 206/474 (43%), Gaps = 51/474 (10%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+SI+ +L +R ++ + VL+Q+ + D Y II + +++ +F
Sbjct: 300 VTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFR- 358
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
K + + P I NS ++ L G +A ++F M+ +G + + + + +
Sbjct: 359 -KMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATE 417
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-----LIIHGFCKGKRVEEAFKVLDELRIREC 257
+ + ++ +SM + ++A ++I K ++EA V E++ +
Sbjct: 418 GRFADMNNLF-------HSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGV 470
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
+PD + Y + F MG + + + +G+ P T Y I G + + +AKE
Sbjct: 471 RPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKE 530
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
L ++S PR IVFF+ +I +LC
Sbjct: 531 LVSEMMSKGI------------------PRPNIVFFSSIIH---------------SLCN 557
Query: 378 RNKSDELVEVYK-VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+ + +V+ V+ D T + ++N ++ C G++ +A+GV+ M G++PDV
Sbjct: 558 EGRVMDAHDVFNLVIHIGDRPT-IVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVV 616
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN+L+ C+ + L+ +M TY+I++ G A ++FH M
Sbjct: 617 TYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEM 676
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
++ G A D TY LL+GLC+ A +F+K D +IL+T + +L
Sbjct: 677 IDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINAL 730
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 167/376 (44%), Gaps = 5/376 (1%)
Query: 158 NSLLAVLASDGYIDNALK-MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
N+ L L D A+ + MS G + I + I C +++ + L M+ +
Sbjct: 195 NTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMA 254
Query: 217 KRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
K E + V++ +IHGF K V +A +++E+ + +PD + Y + +
Sbjct: 255 K-EGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKAR 313
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
++ + E+VL++ GV P Y I G E+ ++ + S N
Sbjct: 314 AMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFN 373
Query: 336 ALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+ + S+ + A F +M KG +P L + S L + ++ ++ ++
Sbjct: 374 SFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADK 433
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ +N+++S G + EA V EM+ +G+ PDV Y++L+ A CR L A
Sbjct: 434 GIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADA 493
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA-PDATTYTSLLE 513
+ + QM + G N Y+ LI F G++ A L M+ KG+ P+ ++S++
Sbjct: 494 MEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIH 553
Query: 514 GLCQETNLQAAFEVFN 529
LC E + A +VFN
Sbjct: 554 SLCNEGRVMDAHDVFN 569
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 105/480 (21%), Positives = 208/480 (43%), Gaps = 16/480 (3%)
Query: 85 LSYHSILKSL-SLSRQINAIDSVLKQVK-VNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
+SY++++KSL SR A+D V + K + + D + +I + KA ++
Sbjct: 228 ISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLI 287
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
NE+ + + P++ NS++ L +D A + +M +GVE + + I +
Sbjct: 288 NEMVQ--KGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYS 345
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + M ++ + +I G V + CK R ++A ++ + + PD
Sbjct: 346 CSGHWKESAKMFRKMTSK--GLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPD 403
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
++Y I+ + G + + G+ + + ++ +R + + L
Sbjct: 404 LVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCF-NILISAHAKRGMMDEAMLVF 462
Query: 321 VIVSGKFTIDDDV-LNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ G+ D V + LI + + + A+ F+ MI G P +L C
Sbjct: 463 TEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMH 522
Query: 379 N---KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
K+ ELV +++S ++ ++ ++ LC GR+ +A+ V + G P +
Sbjct: 523 GDLVKAKELVS--EMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTI 580
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
+NSL++ C + A + D M + G ++ TYN L+S + + G+I+ L LF
Sbjct: 581 VTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFRE 640
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
ML K V P TY+ +L+GL AA ++F++ ++ + + LCR L
Sbjct: 641 MLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDL 700
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 191/442 (43%), Gaps = 15/442 (3%)
Query: 82 HSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
H P +SY +L + + ++++ + I + + +I + + +A
Sbjct: 400 HMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAM 459
Query: 140 SVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
VF E++ + + P++ ++L++ G + +A++ F +M G+E +T+ + I
Sbjct: 460 LVFTEMQ--GQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIH 517
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
FC + L + ++ E+ + N V IIH C RV +A V + +
Sbjct: 518 GFCMHGDLVKAKELVSEMMSKGIPRPN-IVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGD 576
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-- 315
+P + + + + + L+G + + VL +G+ P Y + G +I +
Sbjct: 577 RPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLI 636
Query: 316 --KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+E+ V VL+ L + + +A F+ MI+ G + T L K
Sbjct: 637 LFREMLHKKVKPTTVTYSIVLDGLFHAGRT---SAAKKMFHEMIDSGTAVDIDTYKILLK 693
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
LC+ + +DE + ++ L A D D+ N +++ L R EA + + GL P
Sbjct: 694 GLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVP 753
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+VS Y ++ +E + A ++ M SGC+ + + N +I + G+I A
Sbjct: 754 NVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYM 813
Query: 494 HNMLEKGVAPDATTYTSLLEGL 515
+ ++ +A+T TSLL L
Sbjct: 814 SKVDGTIISLEAST-TSLLMSL 834
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 3/275 (1%)
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV--SGKFTIDDDVLNALI 338
+V+L + LG P Y I L + R EA ++ + + G+ + D N +I
Sbjct: 212 DVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVI 271
Query: 339 -GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
G + A N M++KG P + T +++ LCK D+ V + +
Sbjct: 272 HGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVE 331
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D +Y ++ SG +E+ + ++M KGL P + +NS M + C+ + A+++
Sbjct: 332 PDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEI 391
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ M G +L +Y+IL+ ++ G LFH+M +KG+ + + L+ +
Sbjct: 392 FQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAK 451
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ A VF + V ST + + CR
Sbjct: 452 RGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCR 486
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/515 (22%), Positives = 212/515 (41%), Gaps = 63/515 (12%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
F S + +++ L I + ++ +VK + VY +I S+ + +A
Sbjct: 316 FVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAE 375
Query: 140 SVFNEVKFNC---EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
S+FN + D+ I L+ G +D AL +M+ G++ + + I
Sbjct: 376 SLFNNMGHKGLFPNDVTYSI---LIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLI 432
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C+ KL S+ DE+ N + VI +I G+CK + AF++ E+ +
Sbjct: 433 SGHCKLGKLRAAKSLFDEMIA--NGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKG 490
Query: 257 CKPDFIAYRIV----------AEEFKLMGSVFEREVV----------------------- 283
P+ + + AE KL G + E V+
Sbjct: 491 ISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAF 550
Query: 284 --LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
L + + G+ P T YR I GL R+ EA+E + LN + G +
Sbjct: 551 ELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREF-----MNDLQGEQQKLNEIEGCL 605
Query: 342 SSIDPRSAIV--------------FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
++ +A++ M+ +P +T + L ++ +++
Sbjct: 606 PNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL 665
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
+ VL + + +YN+++ C GR++EA V+ M G+ PD Y++++ CR
Sbjct: 666 HDVL-LEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCR 724
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
L+ A KLW+ M G + + YN LI GE+ A L +M+ +GV P+ T
Sbjct: 725 RGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRAT 784
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
Y SL+ G C +++ + + F+ +N +L+ S+
Sbjct: 785 YNSLIHGTCLMSSVSSTADYFSCKLNWCFLLSCSL 819
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 138/556 (24%), Positives = 237/556 (42%), Gaps = 74/556 (13%)
Query: 7 TDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSL 66
T A+ SQ + ++ R + W L + + +L P V +V+ L L
Sbjct: 21 TFCASPDSQFVACLTDIVRGNQSWRVALNNSF----ISQTLKPHHVEKVL-IQTLDDSRL 75
Query: 67 ALGFFNWASQQPNFTHSPLSY----HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV- 121
AL FFN+ NF HS S+ H++++S +L +++ L +N L S
Sbjct: 76 ALRFFNFLGLHKNFDHSTTSFCILIHALVQS-NLYWPASSLLQTLLLRGLNPEGLFESFL 134
Query: 122 --YR-----------FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDG 168
YR +I + +Q + V + +C I P+I +L VL +G
Sbjct: 135 DSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVV-RLMMDC-GILPQI-RTLSGVL--NG 189
Query: 169 YID-----NALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
I AL +FDE+ G+ + + CE L + + + + E+S
Sbjct: 190 LIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCE---LKDFIRAREVIGRMESSGC 246
Query: 224 NGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+ SV + I G CK +RV EA ++ + ++Y+
Sbjct: 247 DLSVATYNVFIRGLCKNQRVWEAVEI----------KNLLSYK----------------- 279
Query: 283 VLKKKRKLGVAPRTNDYREFILGLI-VERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
G+ Y +LGL VE + + E+I G + V N + G
Sbjct: 280 --------GLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLR 331
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ SA N + + G P+L + L ++CK K DE ++ + F +
Sbjct: 332 KKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDV 391
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y++++ C G+L A + +M G+ V Y+SL+ C+ LR AK L+D+M
Sbjct: 392 TYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEM 451
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
A+G N+ Y LIS + + GE+ A RL+H M KG++P+ T+T+L+ GLC +
Sbjct: 452 IANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRM 511
Query: 522 QAAFEVFNKSVNHDVM 537
A ++F + V +V+
Sbjct: 512 AEANKLFGEMVEWNVI 527
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 185/442 (41%), Gaps = 55/442 (12%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVK-FNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMS 181
++ L + N AF + N+VK F + P + N+L+ + DG +D A +F+ M
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVKKFG---VAPSLFVYNALINSMCKDGKLDEAESLFNNMG 382
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-IIHGFCKGK 240
H+G+ + + + + I FC+ KL L L K I +V +I G CK
Sbjct: 383 HKGLFPNDVTYSILIDSFCKRGKLDVALHFLG---KMTEVGIKATVYPYSSLISGHCKLG 439
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
++ A + DE+ KP+ + Y + + G + + + G++P T +
Sbjct: 440 KLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFT 499
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK 359
I GL R+ EA +L +V ++ N LI G + A + M+EK
Sbjct: 500 ALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEK 559
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G VP D +Y ++S LC++GR+ EA
Sbjct: 560 GLVP-----------------------------------DTYTYRPLISGLCSTGRVSEA 584
Query: 420 YGVIQEMKRK--------GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+ +++ + G P+V Y +L+ C+ L+ A+ L +M AS N
Sbjct: 585 REFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQN 644
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
TY + + G IE A++L H++L +G + TY L+ G C+ +Q A EV
Sbjct: 645 TYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNM 703
Query: 532 VNHDVMLARSILSTFMISLCRR 553
++ + ST + CRR
Sbjct: 704 IDSGISPDCISYSTIIYEYCRR 725
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 160/378 (42%), Gaps = 12/378 (3%)
Query: 181 SHRGVEFST-IGFGVFIWKFCENAK----LGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
S+R FST +GF + I + +N + L V M+D + ++G +++G
Sbjct: 136 SYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSG------VLNG 189
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
+ ++ A + DE+ +PD Y V + V+ + G
Sbjct: 190 LIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLS 249
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFN 354
Y FI GL +R+ EA E+ ++ D L+ + ++ + N
Sbjct: 250 VATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMN 309
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
MIE G VP+ + +SNL L K+ ++ + + YN +++ +C G
Sbjct: 310 EMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDG 369
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+L EA + M KGL P+ Y+ L+++ C+ L A +M G + Y+
Sbjct: 370 KLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYS 429
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
LIS ++G++ A LF M+ G+ P+ YTSL+ G C+E L AF ++++
Sbjct: 430 SLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGK 489
Query: 535 DVMLARSILSTFMISLCR 552
+ + + LC
Sbjct: 490 GISPNTYTFTALISGLCH 507
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 97/208 (46%), Gaps = 2/208 (0%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
R A+ F+ ++ G P + + + ++LC+ EV + ++ + +YNV
Sbjct: 197 RMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVF 256
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC + R+ EA + + KGL DV Y +L+ C+ + +++ ++M G
Sbjct: 257 IRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGF 316
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ + L+ + G I A L + + + GVAP Y +L+ +C++ L A
Sbjct: 317 VPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAES 376
Query: 527 VFNKSVNHDVMLARSILSTFMI-SLCRR 553
+FN ++ H + + + +I S C+R
Sbjct: 377 LFN-NMGHKGLFPNDVTYSILIDSFCKR 403
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 171/380 (45%), Gaps = 3/380 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N ++ VL +G + A + M GV+ + + + I C K + + ++
Sbjct: 220 NIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKD 279
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + I G CK R+EEA ++ ++ P+ + Y + + + G +
Sbjct: 280 K--GLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDL 337
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ + G+ Y FI L +E R+ +A + + + D N L
Sbjct: 338 DKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNIL 397
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G D + A + M+ KG PTL T ++L L KRN+ E ++ +
Sbjct: 398 INGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGL 457
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ +N ++ C +G + A+ +++EM + PD YN+LM+ CRE + A++
Sbjct: 458 LPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQ 517
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L D+M G + +YN LIS +S+ G+++ A R+ M+ G P TY +L++GLC
Sbjct: 518 LLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLC 577
Query: 517 QETNLQAAFEVFNKSVNHDV 536
+ + A E+ + V+ +
Sbjct: 578 KNQEGEHAEELLKEMVSKGI 597
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 159/354 (44%), Gaps = 13/354 (3%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G A +F M +G+E + FI C+ +L + ++ + E ++ +V
Sbjct: 265 GKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLI--CKMLEGGLVPNAV 322
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+I G+C +++A+ DE+ + + Y + + G + + + ++K+
Sbjct: 323 TYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEM 382
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKE----LGEVIVSG--KFTIDDDVLNALIGSV 341
R+ G+ P + I G R +AK L E++ G + L ++G
Sbjct: 383 REKGMMPDAVTHNILINGYC---RCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKR 439
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ + + A F+ + ++G +P + + L C D ++ K + D
Sbjct: 440 NRM--KEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEI 497
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN ++ C G++ EA ++ EMKR+G+ PD YN+L+ + ++ A ++ D+M
Sbjct: 498 TYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEM 557
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+G + TYN LI + E E A L M+ KG+ PD +TY S++E +
Sbjct: 558 MTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 136/323 (42%), Gaps = 36/323 (11%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I+ CK ++++A + + + KP+ + Y + L G V+ + +
Sbjct: 221 IMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDK 280
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G+ P Y FI GL E R+ EA L ++ G + NALI G + D A
Sbjct: 281 GLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKA 340
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ + MI KG + +L T YN+ +
Sbjct: 341 YAYRDEMISKGIMASLVT-----------------------------------YNLFIHA 365
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
L GR+ +A +I+EM+ KG+ PD +N L+ CR + A L D+M G
Sbjct: 366 LFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPT 425
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
L TY LI + ++ A LF + ++G+ PD + +L++G C N+ AF++
Sbjct: 426 LVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLK 485
Query: 530 KSVNHDVMLARSILSTFMISLCR 552
+ N V+ +T M CR
Sbjct: 486 EMDNMKVLPDEITYNTLMQGYCR 508
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 105/205 (51%)
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
P A+ F + EKG VP + T + + K N++ +Y + + + + ++N+
Sbjct: 162 PNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNI 221
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
M++ LC G+L++A I M+ G+ P+V YN+++ C + A+ ++ M G
Sbjct: 222 MINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKG 281
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+ TYN IS + G +E A L MLE G+ P+A TY +L++G C + +L A+
Sbjct: 282 LEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAY 341
Query: 526 EVFNKSVNHDVMLARSILSTFMISL 550
++ ++ +M + + F+ +L
Sbjct: 342 AYRDEMISKGIMASLVTYNLFIHAL 366
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 140/332 (42%), Gaps = 38/332 (11%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ + G +D A DEM +G+ S + + +FI ++G +M+ E+R
Sbjct: 325 NALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMR- 383
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E M+ +V ++I+G+C+ + AF +LDE+ + +P + Y +
Sbjct: 384 -EKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLI--------- 433
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
++LG R+ EA L I D V NAL
Sbjct: 434 ------------------------YVLG--KRNRMKEADALFSKIQQEGLLPDIIVFNAL 467
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G ++ + A M +P T + L + C+ K +E ++ +
Sbjct: 468 IDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGI 527
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D SYN ++S G +++A+ V EM G DP + YN+L++ C+ A++
Sbjct: 528 KPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEE 587
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
L +M + G + + TY +I V ++EG
Sbjct: 588 LLKEMVSKGITPDDSTYLSIIEAMETVDDLEG 619
>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
Length = 792
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 162/347 (46%), Gaps = 5/347 (1%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-IIHGFCKGKRVEEAFKVLD 250
+G I C++ KL + +++ D++++ + + S++ ++ G+C+ R++EA K+
Sbjct: 398 YGCLIHWLCKHQKLHEAVNLWDKMKE---AGVKPSIVTYHSLLLGYCEKGRMDEALKLYS 454
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
E+ + P+ + Y + + + + +L + R+ GV+ Y I GL +
Sbjct: 455 EMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVN 514
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
R+CE E+ + +S F N++I G V + SA + M +KG P + T +
Sbjct: 515 RVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYT 574
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
+ C+ N D V++ + + D+ +YN + C G + A + + +
Sbjct: 575 SFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKD 634
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
GL PDV+ YNS + ++ A K + M + + Y LI FS+VG + A
Sbjct: 635 GLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFA 694
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
L L+ M+ V PD T+T+L GLC+ ++ A + + DV
Sbjct: 695 LELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDV 741
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 173/413 (41%), Gaps = 17/413 (4%)
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVL 164
L ++ V+ D Y +I L + + +A ++++++K + P I +SLL
Sbjct: 383 LLELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKE--AGVKPSIVTYHSLLLGY 440
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
G +D ALK++ EM +G + + + + + + ++L+E+R +N +
Sbjct: 441 CEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMR--QNGVSC 498
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF---KLMGSVFERE 281
G ++I+G RV E ++L P + Y + F +MGS F
Sbjct: 499 GDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFG-- 556
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV--LNALIG 339
+ ++ RK G+ P Y FI G R C + +I + I D+ NA I
Sbjct: 557 -MYRQMRKKGITPNIVTYTSFIDGYC--RTNCCDLAVKLLIYVRRDGIQPDIAAYNAFID 613
Query: 340 SVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
+ S A+ F +++ G P ++ ++ E + Y +
Sbjct: 614 TFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVA 673
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D E Y ++ G + A + EM + PD + +L CR + AK+L
Sbjct: 674 DTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLL 733
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
D M S N+ TYN+LI+ G+++ A +L ML GV PD TTY L
Sbjct: 734 DDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/460 (18%), Positives = 197/460 (42%), Gaps = 9/460 (1%)
Query: 94 LSLSRQINAID--SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCED 151
++ +R +A D ++ +++ D+ +Y +I + ++G A +F+E+
Sbjct: 158 VTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVK 217
Query: 152 IGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM 211
+ ++ L D AL++ +M G E + + + + ++ + L +
Sbjct: 218 PDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRL 277
Query: 212 LDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
D++ ++ V+A +++HG+C V +A + DE+ P + Y ++ +
Sbjct: 278 KDQMLLATGKKMD-VVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGC 336
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
G E + ++ + G+ T ++ I GL+ ++R +A L E++V D
Sbjct: 337 DAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGVP-DV 395
Query: 332 DVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
LI + A+ ++ M E G P++ T +L C++ + DE +++Y
Sbjct: 396 FTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSE 455
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ + + +Y ++ AY ++ EM++ G+ YN L+ +
Sbjct: 456 MPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNR 515
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ ++ + + G TYN +I+ F + G + A ++ M +KG+ P+ TYTS
Sbjct: 516 VCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTS 575
Query: 511 LLEGLCQETNLQAAFEVF----NKSVNHDVMLARSILSTF 546
++G C+ A ++ + D+ + + TF
Sbjct: 576 FIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTF 615
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 162/391 (41%), Gaps = 35/391 (8%)
Query: 56 INPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKI 115
+ P ++T+HSL LG+ ++L L ++ K N++
Sbjct: 426 VKPSIVTYHSLLLGYCEKGRMD--------------EALKLYSEMPD-----KGFPPNEV 466
Query: 116 TLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALK 175
T Y ++ I+ K A+++ NE++ N G N L+ L Y+ N +
Sbjct: 467 T-----YTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGL----YMVNRVC 517
Query: 176 MFDEMSHR----GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL 231
DEM R G +T+ + I F + +G M ++RK+ + V
Sbjct: 518 EVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKK--GITPNIVTYTS 575
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I G+C+ + A K+L +R +PD AY + F G++ L K G
Sbjct: 576 FIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDG 635
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AI 350
+ P Y F+ G + + EA + ++ + D ++ LI S + + A+
Sbjct: 636 LTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFAL 695
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
++ M+ +P T + L+ LC+ D + + D ++ +YN++++
Sbjct: 696 ELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINAC 755
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
G+L+EA+ + EM G+ PD + Y+ L
Sbjct: 756 VRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 46/105 (43%)
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M +G+ PD L+ R A L+D+M GC + K Y+++I G
Sbjct: 141 MVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGM 200
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
A+RLF M GV PD Y + GLC+ + A +V K
Sbjct: 201 HCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGK 245
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 1/185 (0%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
++ M+ +G VP + ++L + + + + ++ + + D + Y+V++
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G +A + EM G+ PD Y + C+ A ++ +M +G T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257
Query: 473 YNILISKFSEVGEIEGALRLFHNM-LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
Y+ ++ +VG ++ ALRL M L G D T L+ G C + A ++F++
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEV 317
Query: 532 VNHDV 536
V+ V
Sbjct: 318 VSDGV 322
>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
Length = 792
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 162/347 (46%), Gaps = 5/347 (1%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-IIHGFCKGKRVEEAFKVLD 250
+G I C++ KL + +++ D++++ + + S++ ++ G+C+ R++EA K+
Sbjct: 398 YGCLIHWLCKHQKLHEAVNLWDKMKE---AGVKPSIVTYHSLLLGYCEKGRMDEALKLYS 454
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
E+ + P+ + Y + + + + +L + R+ GV+ Y I GL +
Sbjct: 455 EMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVN 514
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
R+CE E+ + +S F N++I G V + SA + M +KG P + T +
Sbjct: 515 RVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYT 574
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
+ C+ N D V++ + + D+ +YN + C G + A + + +
Sbjct: 575 SFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKD 634
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
GL PDV+ YNS + ++ A K + M + + Y LI FS+VG + A
Sbjct: 635 GLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFA 694
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
L L+ M+ V PD T+T+L GLC+ ++ A + + DV
Sbjct: 695 LELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDV 741
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 181/426 (42%), Gaps = 11/426 (2%)
Query: 132 GKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
G + A ++F+E++ ++ + ++ G +A+++FDEM+ GV+
Sbjct: 163 GASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERV 222
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKV 248
+ + I C+ + L +L ++R+ + SV+ VL+ K +R++EA ++
Sbjct: 223 YAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLV-----KVRRMDEALRL 277
Query: 249 LDELRIRECKP-DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
D++ + K D + ++ + L G V + + + GV P Y I G
Sbjct: 278 KDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCD 337
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
E E +L ++ N +I G + + AI +++ G VP +
Sbjct: 338 AEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTG-VPDVF 396
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T L LCK K E V ++ + + +Y+ ++ C GR+ EA + EM
Sbjct: 397 TYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEM 456
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
KG P+ Y +LM+ ++ A L ++M +G S TYNILI+ V +
Sbjct: 457 PDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRV 516
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
+ L +G P TY S++ G + + +AF ++ + + ++F
Sbjct: 517 CEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSF 576
Query: 547 MISLCR 552
+ CR
Sbjct: 577 IDGYCR 582
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 183/437 (41%), Gaps = 18/437 (4%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S ++ ++K L ++ +LK V V+ D Y +I L + + +A +++
Sbjct: 360 STYEFNLVIKGLLRDKRWKDAIGLLKLV-VDTGVPDVFTYGCLIHWLCKHQKLHEAVNLW 418
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+++K + P I +SLL G +D ALK++ EM +G + + + + +
Sbjct: 419 DKMKE--AGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYI 476
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ ++L+E+R +N + G ++I+G RV E ++L P
Sbjct: 477 KKKAFDNAYALLNEMR--QNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPT 534
Query: 261 FIAYRIVAEEF---KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
+ Y + F +MGS F + ++ RK G+ P Y FI G R C
Sbjct: 535 TMTYNSIINGFVKAGMMGSAFG---MYRQMRKKGITPNIVTYTSFIDGYC--RTNCCDLA 589
Query: 318 LGEVIVSGKFTIDDDV--LNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKN 374
+ +I + I D+ NA I + S A+ F +++ G P ++ ++
Sbjct: 590 VKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTG 649
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
E + Y + D E Y ++ G + A + EM + PD
Sbjct: 650 YKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPD 709
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+ +L CR + AK+L D M S N+ TYN+LI+ G+++ A +L
Sbjct: 710 DKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHD 769
Query: 495 NMLEKGVAPDATTYTSL 511
ML GV PD TTY L
Sbjct: 770 EMLSSGVVPDDTTYDIL 786
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 162/391 (41%), Gaps = 35/391 (8%)
Query: 56 INPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKI 115
+ P ++T+HSL LG+ ++L L ++ K N++
Sbjct: 426 VKPSIVTYHSLLLGYCEKGRMD--------------EALKLYSEMPD-----KGFPPNEV 466
Query: 116 TLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALK 175
T Y ++ I+ K A+++ NE++ N G N L+ L Y+ N +
Sbjct: 467 T-----YTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGL----YMVNRVC 517
Query: 176 MFDEMSHR----GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL 231
DEM R G +T+ + I F + +G M ++RK+ + V
Sbjct: 518 EVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKK--GITPNIVTYTS 575
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I G+C+ + A K+L +R +PD AY + F G++ L K G
Sbjct: 576 FIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDG 635
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AI 350
+ P Y F+ G + + EA + ++ + D ++ LI S + + A+
Sbjct: 636 LTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFAL 695
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
++ M+ +P T + L+ LC+ D + + D ++ +YN++++
Sbjct: 696 ELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINAC 755
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
G+L+EA+ + EM G+ PD + Y+ L
Sbjct: 756 VRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 3/243 (1%)
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNL 371
C+A L + + D+ V I + + D A+ M E G P T S++
Sbjct: 202 CDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSV 261
Query: 372 SKNLCKRNKSDELVEVY-KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L K + DE + + ++L A D+ +++ C +G + +A + E+ G
Sbjct: 262 VDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDG 321
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+ P Y L++ C E + KL QM G + +N++I + A+
Sbjct: 322 VTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAI 381
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
L +++ GV PD TY L+ LC+ L A +++K V + + ++
Sbjct: 382 GLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGY 440
Query: 551 CRR 553
C +
Sbjct: 441 CEK 443
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 45/105 (42%)
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M +G+ PD L+ A L+D+M GC + K Y+++I G
Sbjct: 141 MVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGM 200
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
A+RLF M GV PD Y + GLC+ + A +V K
Sbjct: 201 HCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGK 245
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 79/185 (42%), Gaps = 1/185 (0%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
++ M+ +G VP + ++L + + + ++ + + D + Y+V++
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G +A + EM G+ PD Y + C+ A ++ +M +G T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257
Query: 473 YNILISKFSEVGEIEGALRLFHNM-LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
Y+ ++ +V ++ ALRL M L G D T L+ G C + A ++F++
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEV 317
Query: 532 VNHDV 536
V+ V
Sbjct: 318 VSDGV 322
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 118/523 (22%), Positives = 226/523 (43%), Gaps = 82/523 (15%)
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
+S++ +I+ + V+ ++ + DS Y ++ + +T +AF++ + K
Sbjct: 371 NSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCD--KM 428
Query: 148 NCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
E I P + N+LL L G D+AL+++ M RGV +G+ + +
Sbjct: 429 LQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENF 488
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
++ ++ R + +I G CK ++ EA ++ D+++ C PD I YR
Sbjct: 489 EGASTLWKDILAR--GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 546
Query: 266 I----------VAEEFKLMGSVFEREVV-------------LKKKRKL------------ 290
V + FK+ G++ ERE + L K R+L
Sbjct: 547 TLIDGYCKASNVGQAFKVKGAM-EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGI 605
Query: 291 -GVAPRTNDYREFILGLIVERRICEAK----ELGEVIVSGKFTIDDDVLNALIGSVSSID 345
G+ P Y I G E + +A E+ E +S I +++ L + ID
Sbjct: 606 RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLY-RLGRID 664
Query: 346 PRSAIVFFNFMIEKGRVP---------------------------TLSTLSNLSKN---- 374
A + M++ G P T +N+ N
Sbjct: 665 --EANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIA 722
Query: 375 -LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
LCK K D+ + +LS + D +Y ++ +G + EA+ + EM R+GL P
Sbjct: 723 GLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVP 782
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
++ YN+L+ C+ + + A++L+ ++ G N+ TYN LI + ++G ++ A +L
Sbjct: 783 NIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLK 842
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
M+E+G++P TY++L+ GLC+ +++ + ++ N+ + V
Sbjct: 843 DKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGV 885
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 115/487 (23%), Positives = 200/487 (41%), Gaps = 53/487 (10%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQ-VKVNKITLDSSVYRFI 125
+LGFF + S+Q NF + SY ++ LS R + + L Q V + K +V I
Sbjct: 85 SLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNV---I 141
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
L+ V+ E F+ P + + +L V G NAL +FD M G
Sbjct: 142 WDELV---------GVYREFAFS-----PTVFDMILKVYVEKGLTKNALYVFDNMGKCGR 187
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
S + +N + + ++ + ++ + ++++ FCK +V+EA
Sbjct: 188 IPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRV--GIVPDVFMVSIMVNAFCKDGKVDEA 245
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
+ ++ +P+ + Y + + +G V + VLK + GV+ Y I G
Sbjct: 246 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 305
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTL 365
+ ++ EA++ V E VP
Sbjct: 306 YCKQCKMDEAEK---------------------------------VLRGMQEEAALVPDE 332
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
L C+ K D+ V + + T++ N +++ C G + EA GVI
Sbjct: 333 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 392
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M L PD YN+L++ CRE A L D+M G + TYN L+ VG
Sbjct: 393 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 452
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
+ AL+++H M+++GVAPD Y++LL+GL + N + A ++ + +R +T
Sbjct: 453 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 512
Query: 546 FMISLCR 552
+ LC+
Sbjct: 513 MISGLCK 519
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/432 (21%), Positives = 188/432 (43%), Gaps = 10/432 (2%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
FT S +++++++ L ++ + + ++K + D YR +I + N +AF
Sbjct: 503 FTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAF 562
Query: 140 SVFNEVKFNCEDIGP--EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
V ++ E I P E+ NSL++ L + + EM RG+ + + +G I
Sbjct: 563 KVKGAMER--EPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALID 620
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
+C+ L + S E+ EN + +I ++ G + R++EA ++ ++
Sbjct: 621 GWCKEGMLDKAFSSYFEMT--ENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 678
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
PD + + + + + L + K + P Y I GL ++ +A+
Sbjct: 679 FPDHECFLKSDIRYAAIQKIADS---LDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARR 735
Query: 318 LGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
++ F D+ LI G ++ + A + M+ +G VP + T + L LC
Sbjct: 736 FFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLC 795
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K D ++ L F ++ +YN ++ C G + A+ + +M +G+ P V
Sbjct: 796 KSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVV 855
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
Y++L+ C+ + + KL +QM +G L Y L+ + GE++ +L+ M
Sbjct: 856 TYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMM 915
Query: 497 LEKGVAPDATTY 508
+ ++ A ++
Sbjct: 916 HIRCLSTTAISH 927
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 122/250 (48%), Gaps = 8/250 (3%)
Query: 312 ICEAKELGEVI------VSGKFTIDDDVLNALIG-SVSSIDPRSAIVFFNFMIEKGRVPT 364
+C+ K+ G VI V +F V + ++ V ++A+ F+ M + GR+P+
Sbjct: 131 LCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPS 190
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
L + ++L NL K ++ VY+ + D+ ++MV+ C G++ EA G ++
Sbjct: 191 LRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVK 250
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
+M+ G++P++ Y+SL+ + AK + M G S N+ TY +LI + +
Sbjct: 251 KMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQC 310
Query: 485 EIEGALRLFHNMLEKG-VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
+++ A ++ M E+ + PD Y L++G C+ + A + ++ + + I
Sbjct: 311 KMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFIC 370
Query: 544 STFMISLCRR 553
++ + C+R
Sbjct: 371 NSLINGYCKR 380
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 190/435 (43%), Gaps = 46/435 (10%)
Query: 155 EICNSLLAVLASDGYIDNALKMFDEMSH-RGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
+ CN+ L L G +D A ++FDEM R V + + I C+ K+ ML
Sbjct: 186 KTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLA 245
Query: 214 EVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
E+ + + + +V+ +++ CK RVEEAF++ + P + + I+
Sbjct: 246 ELWR---AGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLA 302
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFI------------LGL-------------- 306
E +VL++ +LGV+P Y E I L L
Sbjct: 303 RGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAV 362
Query: 307 ---IVERRICEAKELG------EVIVSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFNF 355
++ + +C+ E+ E ++S T+ + N ++ + R S + N
Sbjct: 363 TYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNE 422
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M+ +G P ++ + LCK K E V ++ ++ + N ++ LC
Sbjct: 423 MVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKY 482
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
++EA VIQ M KG++ D YN ++ CC++ + A KL M G +L T+N
Sbjct: 483 MKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNT 542
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA----FEVFNKS 531
L+ + +G++E L M +G+ PD +Y ++++G C+ +++ A E+ ++
Sbjct: 543 LLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRG 602
Query: 532 VNHDVMLARSILSTF 546
+ +V + +++ +
Sbjct: 603 LKPNVFIYNALIGGY 617
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/501 (20%), Positives = 217/501 (43%), Gaps = 45/501 (8%)
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNK-ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
++ L++L + Q++A V +++ ++ + L+ Y +I +L + F + E+
Sbjct: 189 NAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELW 248
Query: 147 FNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ P + N L+ L G ++ A ++ M G+ S + FG+ I +
Sbjct: 249 R--AGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGER 306
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
G+V +L E+ + S VI +I C+ +A ++ DE+ +++ KP + Y
Sbjct: 307 FGEVGIVLQEMEQLGVS--PNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTY 364
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE--------------- 309
++A+ G + E +L+ +G+ + + L+
Sbjct: 365 NLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMV 424
Query: 310 ---------------RRICEAKELGEVI------VSGKFTIDDDVLNALI-GSVSSIDPR 347
R +C+ + E + ++ ++ NALI G +
Sbjct: 425 TRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMK 484
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A M+ KG T + + + CK +K +E ++++ ++ + D+ ++N ++
Sbjct: 485 EATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLL 544
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
C G++ E + ++ +MK +GL PD+ Y ++++ C+ +R AK+ ++ G
Sbjct: 545 HAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLK 604
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N+ YN LI + G+I GA+ M G+ P TY SL+ +C ++ A +
Sbjct: 605 PNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTI 664
Query: 528 FNKSVNHDVMLARSILSTFMI 548
F+++ ++V L I T MI
Sbjct: 665 FSQARENNVDLG-VIGYTIMI 684
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 188/447 (42%), Gaps = 18/447 (4%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQ-GKNTQKAFSV 141
+ ++Y+ I K+L ++ + +L+ + +T+ ++ ++ L+Q + + S+
Sbjct: 360 TAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSI 419
Query: 142 FNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
NE+ + + + L G A+ ++ + ++G+ + I CE
Sbjct: 420 TNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCE 479
Query: 202 NAKLGQVLSMLDEVRKRENSMIN-----GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
+ E K +M+N S+ ++I G CK ++EEA K+ ++ R
Sbjct: 480 G-------KYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRG 532
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
KPD + + + +G + E +L + + G+ P Y I G + I +AK
Sbjct: 533 FKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAK 592
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
E ++ + + NALIG + D AI M G PT T +L +
Sbjct: 593 EYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWM 652
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C +E ++ N+ + Y +M+ C G++ EA +EM+ +G+ P+
Sbjct: 653 CHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNK 712
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y +LM A + A KL+D+M SG + TY LI++ SEV ++ +
Sbjct: 713 LTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAE 772
Query: 496 MLEKGVAPDATTYTSLLEGL----CQE 518
+ + D Y L G+ CQ+
Sbjct: 773 LSSGALTKDDRMYNILSNGINAPWCQK 799
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 102/522 (19%), Positives = 209/522 (40%), Gaps = 49/522 (9%)
Query: 73 W-ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQ 131
W A QP ++Y+ ++ +L S ++ + +++ +T + +I L +
Sbjct: 248 WRAGLQPTV----VTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLAR 303
Query: 132 GKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
G+ + V E++ I N L+ G+ AL++FDEM + ++ + +
Sbjct: 304 GERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVT 363
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMING---SVIAVLIIHGFCKGKRVEEAFKV 248
+ + C+ ++ + +L+++ ++ G +V+A L+ + +R+E +
Sbjct: 364 YNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQ----RTRRLESVVSI 419
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
+E+ R +P+ E G E + K G+ I GL
Sbjct: 420 TNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCE 479
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
+ + EA ++ + +++ +D N +I G AI M +G P L T
Sbjct: 480 GKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFT 539
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ L C K +E + + D+ SY ++ C + +R+A + E+
Sbjct: 540 FNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELM 599
Query: 428 RKGLDPDVSFYN-----------------------------------SLMEACCREDLLR 452
+GL P+V YN SLM C L+
Sbjct: 600 DRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVE 659
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
AK ++ Q + + Y I+I + ++G++ A+ F M +G++P+ TYT+L+
Sbjct: 660 EAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLM 719
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRV 554
+ N + A ++F++ V V + +I +I+ C V
Sbjct: 720 YAYSKSGNSEEASKLFDEMVGSGV-IPDNITYGTLIARCSEV 760
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%)
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
K LCK K D E+ L + +YNV++ LC SGR+ EA+ + M++ G+
Sbjct: 229 KALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMT 288
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P V + L+ R + + +M G S N YN LI G ALRL
Sbjct: 289 PSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRL 348
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
F M+ K + P A TY + + LC+E ++ A + ++ + + + +T + L +
Sbjct: 349 FDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQ 408
Query: 553 RV 554
R
Sbjct: 409 RT 410
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS-GCSGNLKT 472
G L A + + +G P + N+ +EA R L A++++D+M S + N +
Sbjct: 164 GSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYS 223
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
Y +I + G+++ + + G+ P TY L++ LC+ ++ AF +
Sbjct: 224 YTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRL 278
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/474 (22%), Positives = 204/474 (43%), Gaps = 19/474 (4%)
Query: 88 HSILKSLSLSRQI-NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV- 145
+ +LK L ++++ A+D ++K++ T D Y ++ K ++A + + +
Sbjct: 133 NQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMA 192
Query: 146 KFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
P + + + + ++G +D A +F EM RG++ + + + I C+
Sbjct: 193 DSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQ 252
Query: 204 KL----GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ G M+D+ K +N N +IHG+ + +E ++L+E+ KP
Sbjct: 253 VVDRAEGVFQQMIDKGVKPDNDTYN------CLIHGYLSIGKWKEVVRMLEEMSAHGLKP 306
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D Y + G E + + G+ P Y I G + + E +L
Sbjct: 307 DCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLL 366
Query: 320 EVIVSGKFTIDDDVLNALIGSVSS---IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
++V + D + N + + + ID A+ FN M ++G P + L LC
Sbjct: 367 NLMVENGLSPDHHIFNIIFTAYAKKAMID--EAMHIFNKMKQQGLSPDVVNYGALIDALC 424
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K + D+ V + + ++ +N +V LCT + +A EM +G+ PDV
Sbjct: 425 KLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVV 484
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
F+N+++ C + + A++L D M G + +Y LI VG I+ A + M
Sbjct: 485 FFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVM 544
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
L G+ PD TY +LL G C+ + A+ VF + + + + ST + L
Sbjct: 545 LSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGL 598
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 179/415 (43%), Gaps = 12/415 (2%)
Query: 140 SVFNEVKFNCE-DIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
S+FN + C + P+ C L+ G +++ F + G + I +
Sbjct: 77 SLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLL 136
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL---R 253
C+ +L + + +L + R E V ++ GFC KR EEA ++L + +
Sbjct: 137 KGLCDAKRLCEAMDILVK-RMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQ 195
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
R C P+ ++Y IV F G V + + + G+ P Y I GL + +
Sbjct: 196 GRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVD 255
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLS 372
A+ + + ++ D+D N LI SI +V M G P T +L
Sbjct: 256 RAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLL 315
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
LC + E ++ + ++ Y +++ T G L E + ++ M GL
Sbjct: 316 NYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLS 375
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
PD +N + A ++ ++ A ++++M G S ++ Y LI ++G ++ A+
Sbjct: 376 PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLK 435
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAA----FEVFNKSVNHDVMLARSIL 543
F+ M+ +GVAP+ + SL+ GLC + A FE+ N+ + DV+ +IL
Sbjct: 436 FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTIL 490
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/458 (21%), Positives = 202/458 (44%), Gaps = 17/458 (3%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN ++Y +++ L ++ ++ + V +Q+ + D+ Y +I + +
Sbjct: 235 QPNV----VTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWK 290
Query: 137 KAFSVFNE-----VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+ + E +K +C G SLL L ++G A +FD M +G++ +
Sbjct: 291 EVVRMLEEMSAHGLKPDCYTYG-----SLLNYLCNNGRCREARFLFDSMIRKGIKPNVAI 345
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+G+ I + L ++ +L+ + EN + I +I + K ++EA + ++
Sbjct: 346 YGILIHGYATKGALSEMHDLLNLMV--ENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNK 403
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
++ + PD + Y + + +G V + + + GVAP + + GL +
Sbjct: 404 MKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSN 370
+AKE +++ D N ++ ++ + A + M G P + + +
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTT 523
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L C + DE + V+ + D +YN ++ C +GR+ +AYGV +EM R G
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+ P V Y++++ AK+L+ M SG N+ YNI+++ S+ ++ A
Sbjct: 584 ITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAF 643
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+LF ++ K + TT+ ++ L + + A +F
Sbjct: 644 KLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLF 681
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/486 (20%), Positives = 202/486 (41%), Gaps = 28/486 (5%)
Query: 75 SQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN 134
SQ + + +SY ++ Q++ ++ ++ I + Y +I L + +
Sbjct: 194 SQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQV 253
Query: 135 TQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+A VF ++ + N L+ S G ++M +EMS G++ +G
Sbjct: 254 VDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGS 313
Query: 195 FIWKFCENAKLGQVLSMLDE-VRK--RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ C N + + + D +RK + N I G ++IHG+ + E +L+
Sbjct: 314 LLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYG-----ILIHGYATKGALSEMHDLLNL 368
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ PD + I+ + + E + K ++ G++P +Y I L R
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGR 428
Query: 312 ICEA-----KELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTL 365
+ +A + + E + F V N+L+ + ++D A F+ M+ +G P +
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIF-----VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDV 483
Query: 366 STLSNLSKNLCKRN---KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
+ + NLC + K+ L+++ + + + SY ++ C GR+ EA
Sbjct: 484 VFFNTILCNLCTKGQVMKAQRLIDLMERVGTR---PGVISYTTLIGGHCLVGRIDEAAKS 540
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ M GL PD YN+L+ CR + A ++ +M +G + + TY+ ++
Sbjct: 541 LDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFT 600
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
A L+ NM+ G + Y +L GL + + AF++F + D L
Sbjct: 601 TRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLE--- 657
Query: 543 LSTFMI 548
++TF I
Sbjct: 658 ITTFNI 663
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 110/487 (22%), Positives = 197/487 (40%), Gaps = 79/487 (16%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y ++ + ++ + +L + N ++ D ++ I + + +A +FN++K
Sbjct: 346 YGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMK 405
Query: 147 FNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC---- 200
+ + P++ N +L+ L G +D+A+ F++M + GV + F ++ C
Sbjct: 406 Q--QGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463
Query: 201 -ENAK---------------------------LGQVLSMLDEVRKRENSMINGSVIA-VL 231
E AK GQV+ + E VI+
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTT 523
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I G C R++EA K LD + KPD Y + + G + + V ++ + G
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583
Query: 292 VAPRTNDYREFILGLIVERRICEAKELG-EVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
+ P Y + GL RR EAKEL +I SGK + I
Sbjct: 584 ITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK--------------------QWNI 623
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+N + L+ LSKN C DE ++++ L + D+ ++ ++N+M+ L
Sbjct: 624 WIYNII-----------LNGLSKNNC----VDEAFKLFQSLCSKDFQLEITTFNIMIGAL 668
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
SGR +A + + GL PDV Y + E E L L+ M SG + N
Sbjct: 669 FKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNS 728
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE------TNLQAA 524
+ N L+ + G+I A + EK + +A+T L+ L ++ T+L
Sbjct: 729 RMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEK 788
Query: 525 FEVFNKS 531
+ V N++
Sbjct: 789 YRVLNEA 795
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/429 (18%), Positives = 155/429 (36%), Gaps = 106/429 (24%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D+ALK+FD + S I F +L+ + V R +S ++
Sbjct: 30 LDDALKLFDGLLTHARPASVIAFN-------------HLLTAVSRVSGRRSSTTESELVV 76
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECK----PDFIAYRIVAEEFKLMGSVFEREVVLK 285
L IREC PD Y I+ F MG +
Sbjct: 77 SLF------------------NRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFG 118
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID 345
K G + + GL +R+CEA +
Sbjct: 119 LILKSGWRVNNIVINQLLKGLCDAKRLCEAMD---------------------------- 150
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT---DMES 402
+ M E G P + + + L K C +++E +E+ +++ + + ++ S
Sbjct: 151 -----ILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVS 205
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y ++++ T G++ +AY + EM +G+ P+V Y ++++ C+ ++ A+ ++ QM
Sbjct: 206 YAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMI 265
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALR------------------------------- 491
G + TYN LI + +G+ + +R
Sbjct: 266 DKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCR 325
Query: 492 ----LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
LF +M+ KG+ P+ Y L+ G + L ++ N V + + I +
Sbjct: 326 EARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIF 385
Query: 548 ISLCRRVLI 556
+ ++ +I
Sbjct: 386 TAYAKKAMI 394
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/469 (20%), Positives = 207/469 (44%), Gaps = 14/469 (2%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N+ H+ + Y++I+ + + + ++++ ++ + +Y ++ + + K
Sbjct: 292 NWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKC 351
Query: 139 FSVFNEVKFNCE-DIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
+VF +K E + P + + L+ + + G +D AL++ +EM +G++ + + +
Sbjct: 352 LNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMI 411
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRI 254
I + + S+ +++ N+ I I ++++ FCK ++ A ++L +
Sbjct: 412 IDGYVQLGDTANAFSVFEDM---SNAGIKPDGITYNILMNAFCKNGQMNRALELLARMES 468
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
+C P Y I+ + F +G + ++ + G P Y + GL ++
Sbjct: 469 GDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDR 528
Query: 315 AKEL-GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
A + E++V+G + + G D A +FN + E G P + ++L K
Sbjct: 529 AASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLK 588
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
CK + + + ++A + YN+++ G + EA ++Q+M+ +GL P
Sbjct: 589 ACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTP 648
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
D+ Y S + ACC+ + A + +QM G NL+ Y LI ++ E AL +
Sbjct: 649 DIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICY 708
Query: 494 HNMLEKGVAPDATTY----TSLLE--GLCQETNLQAAFEVFNKSVNHDV 536
M G+ PD Y TSLL + +ET V ++ V+ +
Sbjct: 709 DEMKSAGMIPDKPLYHCIMTSLLSRAAVARETVFDGVLRVTSEMVDQGI 757
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 165/392 (42%), Gaps = 18/392 (4%)
Query: 172 NALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK--RENSMINGSVIA 229
A+ +EM GV + + V I + +LG V + ++ EN N VI
Sbjct: 245 GAIACVEEMEAEGVSPNAATYSVIISGY---GRLGDVEAAERWFQRALSENWHHN-DVIY 300
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF-------KLMGSVFEREV 282
IIH +CK +E A ++ + + + Y ++ + + K + +VF R
Sbjct: 301 NNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCL-NVFRR-- 357
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSV 341
LK + + G++P Y I ++ +A ++ + + + +I G V
Sbjct: 358 -LKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYV 416
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
D +A F M G P T + L CK + + +E+ + + D +
Sbjct: 417 QLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLR 476
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y +++ G LR A+ +++MK G P + YN +M + + A + D+M
Sbjct: 477 TYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEM 536
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+G N ++Y LI ++ +G++ A + F+ + E G+ PD Y SLL+ C+ +
Sbjct: 537 VVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRM 596
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
Q+ + + V + I + + +R
Sbjct: 597 QSTLAITAEMAAAGVPMNNYIYNILLDGWAQR 628
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 61/122 (50%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+ ++V++ G A + M+ G++P+V Y +L+ A LR A ++M
Sbjct: 195 HTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEME 254
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
A G S N TY+++IS + +G++E A R F L + + Y +++ C+ N++
Sbjct: 255 AEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNME 314
Query: 523 AA 524
A
Sbjct: 315 RA 316
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 53/99 (53%)
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A+ ++ M A+G N+ +Y LI ++ ++ GA+ M +GV+P+A TY+ ++
Sbjct: 211 ARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIIS 270
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
G + +++AA F ++++ + I + + + C+
Sbjct: 271 GYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCK 309
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/154 (19%), Positives = 65/154 (42%)
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
KR ++ + A ++ SY ++ + LR A ++EM+ +G+ P+ +
Sbjct: 204 KRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAA 263
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
Y+ ++ R + A++ + + + N YN +I + + G +E A + M
Sbjct: 264 TYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAM 323
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
E+G+ Y L++G + VF +
Sbjct: 324 EEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRR 357
>gi|296081308|emb|CBI17752.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 132/577 (22%), Positives = 239/577 (41%), Gaps = 96/577 (16%)
Query: 8 DLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLA 67
D+A +S + R R W P + L++L ++P LVA V+ + T +
Sbjct: 81 DIAKNLSPIARYICDSFRKHRNWGPPVVADLNKL---RRVTPVLVAEVLK--VQTDPVIC 135
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
FF+WA +Q + H+ SY++ L+ S Q A D V + + + + +I
Sbjct: 136 SKFFHWAGKQKGYKHNFASYNAFAYCLNRSNQFRAADQVPELMNMQGKPPSEKQFEILIR 195
Query: 128 SLIQGKNTQKAFSVFNEVK-FNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRG 184
I + + V+ ++K F I P + N ++ L G++D A+ ++++
Sbjct: 196 MHIDANRGLRVYYVYEKMKKFG---IKPRVFLYNRIMDGLVKTGHLDLAMSVYEDF---- 248
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
+E+ ++ SV ++++ G CK R++E
Sbjct: 249 ---------------------------------KEDGLVEESVTYMILVKGLCKAGRIDE 275
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
++LD +R CKPD AY + + G++ V ++ RK V P Y +
Sbjct: 276 VLELLDRMRGNLCKPDVFAYTAMVKVLVAEGNLDGCLRVWEEMRKDKVEPDVMAYTTLVA 335
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVP 363
L R+ E EL + + K+ ID + +LI G V + SA +++ G
Sbjct: 336 ALCNGNRVGEGFELFKEMKQKKYLIDRAIYGSLIEGFVVNERVGSACDLLKDLMDSGYRA 395
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKV-----LSAN------------------DY---- 396
L+ ++L + +C + D+ ++++V L N D+
Sbjct: 396 DLAIYNSLIEGMCNVKQVDKAYKLFQVTVHESLEPNFLTVKPMLVSYAEMKRMDDFCSLL 455
Query: 397 -------FTDMESYNVMVSFLCTSG-RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
F ++ + S + G RL+ A V + +K KG +S YN LMEA R
Sbjct: 456 GQMQKLGFPVIDDLSKFFSVMIEKGERLKLALEVFEHLKAKGY-CSISIYNILMEAIHRT 514
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
++ A L+D + S + TY+ I F EVG+++ A ++ ++E P Y
Sbjct: 515 GEVKKALSLFDDIKDSNFKPDSSTYSNAIICFVEVGDVQEACACYNKIIEMCQLPSVAAY 574
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
SL++GLC+ + AA +ML R L+
Sbjct: 575 RSLVKGLCKSEEIDAA-----------IMLVRDCLAN 600
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN ++ L +G L A V ++ K GL + Y L++ C+ + +L D+M
Sbjct: 225 YNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTYMILVKGLCKAGRIDEVLELLDRMR 284
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
+ C ++ Y ++ G ++G LR++ M + V PD YT+L+ LC +
Sbjct: 285 GNLCKPDVFAYTAMVKVLVAEGNLDGCLRVWEEMRKDKVEPDVMAYTTLVAALCNGNRVG 344
Query: 523 AAFEVFNKSVNHDVMLARSILSTFM 547
FE+F + ++ R+I + +
Sbjct: 345 EGFELFKEMKQKKYLIDRAIYGSLI 369
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 90/212 (42%), Gaps = 9/212 (4%)
Query: 345 DPRSAIVFFNFM-IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
DP FF++ +KG ++ + + L + N+ +V ++++ + +
Sbjct: 131 DPVICSKFFHWAGKQKGYKHNFASYNAFAYCLNRSNQFRAADQVPELMNMQGKPPSEKQF 190
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+++ + R Y V ++MK+ G+ P V YN +M+ + L A +++
Sbjct: 191 EILIRMHIDANRGLRVYYVYEKMKKFGIKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKE 250
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G TY IL+ + G I+ L L M PD YT++++ L E NL
Sbjct: 251 DGLVEESVTYMILVKGLCKAGRIDEVLELLDRMRGNLCKPDVFAYTAMVKVLVAEGNLDG 310
Query: 524 AFEVFNK----SVNHDVMLARSILSTFMISLC 551
V+ + V DVM +T + +LC
Sbjct: 311 CLRVWEEMRKDKVEPDVM----AYTTLVAALC 338
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 79/192 (41%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P + + + L K D + VY+ + + +Y ++V LC +GR+ E
Sbjct: 217 GIKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTYMILVKGLCKAGRIDEV 276
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
++ M+ PDV Y ++++ E L ++W++M ++ Y L++
Sbjct: 277 LELLDRMRGNLCKPDVFAYTAMVKVLVAEGNLDGCLRVWEEMRKDKVEPDVMAYTTLVAA 336
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ LF M +K D Y SL+EG + +A ++ ++
Sbjct: 337 LCNGNRVGEGFELFKEMKQKKYLIDRAIYGSLIEGFVVNERVGSACDLLKDLMDSGYRAD 396
Query: 540 RSILSTFMISLC 551
+I ++ + +C
Sbjct: 397 LAIYNSLIEGMC 408
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 132/546 (24%), Positives = 238/546 (43%), Gaps = 55/546 (10%)
Query: 15 QAIISASNRTRPAR----KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGF 70
Q +IS S R +P+ W HQ G + P L RV++ + T +AL
Sbjct: 50 QDVISKSIREKPSNFSNYYWLS------HQFG-PVIVDPDLFVRVLSSFR-TSPRMALRL 101
Query: 71 FNWASQQPNFTHSPLSYHSILKSLS-----------LSRQINA-----IDSVLKQVKVNK 114
F WA QP F S + +IL+ L+ + R INA +D ++ ++
Sbjct: 102 FRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSE 161
Query: 115 IT---LDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGY 169
++ LD ++ + S++ ++ SVF+ K + P++ CN +L +L
Sbjct: 162 VSVKILDLLIWVYSKKSMV-----EQCLSVFD--KMIKSRLSPDVKNCNRILRILRDKDL 214
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+ A++++ M G++ + + + + +C+ K+ Q L +L E+++R V
Sbjct: 215 MSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRR--GCAPNDVTY 272
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE-----REVVL 284
++I+G K E+A ++ E+ K Y + + G + E E+VL
Sbjct: 273 NVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVL 332
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSS 343
K G +P Y FI GL R+ +A + +++ D N LI G
Sbjct: 333 K-----GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRL 387
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT-DMES 402
+ A + F+ + PT+ T + L LC++ + E+ + KV N+ D+ +
Sbjct: 388 GNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGEL-EVAQQLKVEMINEGIAPDIVT 446
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y ++V+ C G L A EM +GL+ D Y + + + A L ++M
Sbjct: 447 YTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEML 506
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
A G +L YN+++ ++G +E A L M+ GV PD TYTS++ + L+
Sbjct: 507 AKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLR 566
Query: 523 AAFEVF 528
E+F
Sbjct: 567 KGREIF 572
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 192/420 (45%), Gaps = 11/420 (2%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
Y ++ S +G Q+ + +E++ N L+ L+ G + A + EM
Sbjct: 237 YNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEML 296
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
G++ S + I+ + L + LS+ +E+ + S + + I+G CK R
Sbjct: 297 KTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS--FIYGLCKLGR 354
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+ +A + L ++ PD ++Y + + +G++ + ++ + R + + P Y
Sbjct: 355 MSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNT 414
Query: 302 FILGLIVERRICEAKELG-EVIVSGKFTIDDDVLNALI---GSVSSIDPRSAIVFFNFMI 357
+ GL + + A++L E+I G I D++ I GS A FF+ M+
Sbjct: 415 LLDGLCRQGELEVAQQLKVEMINEG---IAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 471
Query: 358 EKG-RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
+G + + + + + L K + + + + A + D+ YNV+V LC G L
Sbjct: 472 HEGLELDSYAYATRIVGEL-KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNL 530
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
EA ++Q+M G+ PD Y S++ A LR ++++ +M + G + ++ TY +L
Sbjct: 531 EEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVL 590
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I + G +E A F M EKG+ P+ TY SL+ GLC+ + A+ F + V +
Sbjct: 591 IHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGI 650
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 196/456 (42%), Gaps = 9/456 (1%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+++L S ++ +L +++ + Y +I L + ++A + E
Sbjct: 235 VTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGE 294
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + N L+ + G + AL + +EM +G + + FI+ C+ +
Sbjct: 295 MLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGR 354
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ + L ++ N+++ V +I+G+C+ + +AF + DELR P + Y
Sbjct: 355 MSDAMQQLSDMLA--NNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTY 412
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKL---GVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ + G E EV + K ++ G+AP Y + G + A+E +
Sbjct: 413 NTLLDGLCRQG---ELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDE 469
Query: 322 IVSGKFTIDDDVLNA-LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
++ +D ++G + D A M+ KG P L + + LCK
Sbjct: 470 MLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGN 529
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+E E+ + + ++ D +Y ++ +GRLR+ + EM KGL P V Y
Sbjct: 530 LEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTV 589
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L+ + L A + +M G N+ TYN LI+ +V ++ A F M+EKG
Sbjct: 590 LIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKG 649
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+ P+ +YT L+ C N Q A ++ + ++ V
Sbjct: 650 IFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGV 685
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 180/411 (43%), Gaps = 20/411 (4%)
Query: 62 THHSLALGFFNWA------SQQPNFT---HSPL--SYHSILKSL-SLSRQINAIDSVLKQ 109
T++ L G+FN S Q SP +Y+S + L L R +A+ L
Sbjct: 306 TYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQ-LSD 364
Query: 110 VKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASD 167
+ N + D Y +I + N KAF +F+E++ + P I N+LL L
Sbjct: 365 MLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELR--SIYLFPTIVTYNTLLDGLCRQ 422
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G ++ A ++ EM + G+ + + + + C+ L DE+ E ++
Sbjct: 423 GELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML-HEGLELDSYA 481
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
A I+ G K AF + +E+ + PD I Y +V + +G++ E +L+K
Sbjct: 482 YATRIV-GELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKM 540
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDP 346
GV P Y I + R+ + +E+ ++S T LI G
Sbjct: 541 VSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRL 600
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A ++F+ M EKG +P + T ++L LCK + D+ + + F + SY ++
Sbjct: 601 ERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTIL 660
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
++ C G +EA + ++M +G+ PD +++L++ ++ L+ ++L
Sbjct: 661 INENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQL 711
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 98/205 (47%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ + M E G PT+ T + L + CK K + +++ + + +YNV+++
Sbjct: 218 AVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLIN 277
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L G +A G+I EM + GL YN L+ + +L A L ++M G S
Sbjct: 278 GLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASP 337
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ TYN I ++G + A++ +ML + PD +Y +L+ G C+ NL AF +F
Sbjct: 338 TVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLF 397
Query: 529 NKSVNHDVMLARSILSTFMISLCRR 553
++ + + +T + LCR+
Sbjct: 398 DELRSIYLFPTIVTYNTLLDGLCRQ 422
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 95/200 (47%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F+ MI+ P + + + + L ++ + VEVY+ + + +YN ++ C
Sbjct: 187 FDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCK 246
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G++++ ++ EM+R+G P+ YN L+ ++ AK L +M +G + T
Sbjct: 247 GGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYT 306
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YN LI + G + AL L M+ KG +P TY S + GLC+ + A + + +
Sbjct: 307 YNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDML 366
Query: 533 NHDVMLARSILSTFMISLCR 552
++++ +T + CR
Sbjct: 367 ANNLLPDVVSYNTLIYGYCR 386
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 85/176 (48%)
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K++ ++ + V+ + + D+++ N ++ L + +A V + M G+ P +
Sbjct: 176 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN+L+++ C+ ++ L +M GC+ N TYN+LI+ S+ GE E A L M
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L+ G+ A TY L+ G + L A + + V + ++F+ LC+
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCK 351
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 200/433 (46%), Gaps = 12/433 (2%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSH 182
++ SL++ QK F+ V C+ + P++ + + G ++ A+K+F +M
Sbjct: 245 LLTSLVRANEFQKCCEAFDVV---CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 301
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR--ENSMINGSVIAVLIIHGFCKGK 240
GV + + F I + + +++ +R E ++I S++ + G + K
Sbjct: 302 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL----VKGLTRAK 357
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
R+ +A+ VL E+ + P+ I Y + + F GS+ + + G++ ++ Y
Sbjct: 358 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 417
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS-IDPRSAIVFFNFMIEK 359
I G + A+ L + ++S F ++ ++I + S + SA+ F M+ +
Sbjct: 418 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 477
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
P L+ L LCK K + +E++ + D + N ++ LC +G+L EA
Sbjct: 478 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 537
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ + +E+ +G D YN+L+ CC + L A D+M G + TY+ILI
Sbjct: 538 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 597
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ ++E A++ + + G+ PD TY+ +++G C+ + E F++ ++ +V
Sbjct: 598 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 657
Query: 540 RSILSTFMISLCR 552
+ + + + CR
Sbjct: 658 TVVYNHLIRAYCR 670
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/477 (20%), Positives = 194/477 (40%), Gaps = 36/477 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++K L+ +++I VLK++ + VY +I S I+ + KA + +
Sbjct: 344 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL 403
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + N+L+ +G DNA ++ EM G + F I C +
Sbjct: 404 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM 463
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLI-------------------------------- 232
L + E+ R N G ++ LI
Sbjct: 464 FDSALRFVGEMLLR-NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 522
Query: 233 --IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+HG C+ +++EAF++ E+ R C D ++Y + + E + L + K
Sbjct: 523 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 582
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G+ P Y I GL ++ EA + + D + +I G +
Sbjct: 583 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 642
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
FF+ M+ K P ++L + C+ + +E+ + + + +Y ++
Sbjct: 643 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 702
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
+ R+ EA + +EM+ +GL+P+V Y +L++ + + + L +M + N
Sbjct: 703 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 762
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
TY ++I ++ G + A RL + M EKG+ PD+ TY + G ++ + AF+
Sbjct: 763 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 93/197 (47%)
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
KG P + + CK K +E V+++ + ++ ++N ++ L GR E
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 326
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A+ ++M +G++P + Y+ L++ R + A + +M G N+ YN LI
Sbjct: 327 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 386
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
F E G + A+ + M+ KG++ ++TY +L++G C+ A + + ++ +
Sbjct: 387 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 446
Query: 539 ARSILSTFMISLCRRVL 555
+ ++ + LC ++
Sbjct: 447 NQGSFTSVICLLCSHLM 463
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN + Y+ ++++ S +++ + + +K I+ +S+ Y +I + +
Sbjct: 655 QPN----TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 710
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALK---MFDEMSHRGVEFSTIGFG 193
+A +F E++ E + P + + A++ G + +K + EM + V + I +
Sbjct: 711 EAKLLFEEMRM--EGLEPNVFH-YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 767
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
V I + + + + +L+E+R E ++ S+ I+G+ K V EAFK DE
Sbjct: 768 VMIGGYARDGNVTEASRLLNEMR--EKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 178/382 (46%), Gaps = 19/382 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L+ G ++ A ++ EM G+E S + I +CE +L DE +
Sbjct: 229 NVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQL-------DEASR 281
Query: 218 RENSMINGSVIAVL-----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
M++ + L I++G CK RV +A K+LD + + PD ++Y + +
Sbjct: 282 LGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYT 341
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
+G++ E ++ + R G+ P Y I GL + A L + ++ K D D
Sbjct: 342 RLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMI--KHGPDPD 399
Query: 333 VLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPT-LSTLSNLSKNLCKRNKSDELVEVY 388
V I G + A F+ M+ +G P + ++ + L K + +
Sbjct: 400 VFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGEL-KLGDPSKAFGMQ 458
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+ + A + D+ +YNV + L G L+EA ++++M GL PD Y S++ A
Sbjct: 459 EEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMA 518
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
LR A+ ++ +M + G ++ TY +LI ++ G ++ A+ F M EKGV P+ TY
Sbjct: 519 GHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITY 578
Query: 509 TSLLEGLCQETNLQAAFEVFNK 530
+L+ GLC+ + A++ F +
Sbjct: 579 NALINGLCKVRKMDQAYKFFTE 600
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 118/500 (23%), Positives = 211/500 (42%), Gaps = 88/500 (17%)
Query: 49 PSLVARVINPYLLTHH-SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVL 107
P L+ RV+N + H ++AL FF WA +Q F S L+Y IL L+ + + + V+
Sbjct: 47 PQLLVRVLNT--VRHRPAVALRFFRWAERQTGFKRSELTYAVILDILARNGLMRSAYCVM 104
Query: 108 -KQVKVNKITLDSSVYRFIIPSLIQGKNT--QKAFSVFNEVKFNCEDIGPEI--CNSLLA 162
K V V V + I K + +K VF K + + P++ CN +L
Sbjct: 105 EKVVSVKMENGVVDVLILDLLLWIYAKKSMLEKCLLVF--YKMVSKGMLPDLKNCNRVLR 162
Query: 163 VLAS-DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
+L D ID A ++++ M G+ + + + + FC+ K
Sbjct: 163 LLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGK----------------- 205
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
V+EA ++L +++ C P+ + Y ++ G + + +
Sbjct: 206 --------------------VQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAK 245
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
++++ +LG+ Y I G + ++ EA LGE ++S
Sbjct: 246 ELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLS----------------- 288
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+G VPTL T + + LCK + + ++ V+ + D+
Sbjct: 289 -----------------RGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLV 331
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
SYN ++ G + EA+ + E++ +GL P V YN+L++ CR L A +L D+M
Sbjct: 332 SYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEM 391
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G ++ T+ IL+ F ++G + A LF ML +G+ PD Y + + G + +
Sbjct: 392 IKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDP 451
Query: 522 QAAFEVFNKSVNHDVMLARS 541
AF + + MLAR
Sbjct: 452 SKAFGM------QEEMLARG 465
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 2/220 (0%)
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
VL L SSID + +N M+E G PT+ T + + + CK+ K E +++ +
Sbjct: 160 VLRLLRDRDSSIDVAREV--YNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQ 217
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ +YNV+V+ L SG L +A +IQEM R GL+ Y+ L+ C + L
Sbjct: 218 KMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLD 277
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A +L ++M + G L TYN ++ + G + A +L M+ K + PD +Y +L+
Sbjct: 278 EASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLI 337
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
G + N+ AF +F + ++ + +T + LCR
Sbjct: 338 YGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCR 377
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 154/364 (42%), Gaps = 42/364 (11%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ G I A +F E+ RG+ S + + I C L + + DE+ K
Sbjct: 334 NTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIK 393
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY--RIVAEEFKLMG 275
+++ GFCK + A ++ DE+ R +PD AY RIV E KL G
Sbjct: 394 HGPD--PDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGE-LKL-G 449
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ + ++ G P Y FI GL + EA EL + ++ D
Sbjct: 450 DPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYT 509
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
++I + + R A F M+ KG P++ T + L + R + + + +
Sbjct: 510 SIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEK 569
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ +YN +++ LC ++ +AY EM+ KG+ P
Sbjct: 570 GVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISP--------------------- 608
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
N TY ILI++ +G + ALRL+ +ML++ + PD+ T+++LL+
Sbjct: 609 --------------NKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKH 654
Query: 515 LCQE 518
L ++
Sbjct: 655 LNKD 658
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 165/362 (45%), Gaps = 9/362 (2%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-L 231
A+ + D M RG + + + +GV + C+ L++L+ K E + I V+
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLN---KMEAAKIEADVVIFNT 265
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
II CK + V++A + E+ + +P+ + Y + G + +L +
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSSIDP-RS 348
+ P + I + E + EA++L + ++ K +ID D+ N+L+ D
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMI--KRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A F FM+ K P + T + L K CK + ++ E+++ +S D +Y ++
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L G A V ++M G+ PD+ Y+ L++ C L A +++D M S
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ Y +I + G+++ LF ++ KGV P+ TY +++ GLC + LQ A+ +
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 529 NK 530
K
Sbjct: 564 KK 565
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 185/433 (42%), Gaps = 42/433 (9%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ +A D + + ++M + + + I FC +++ L++L ++ K
Sbjct: 89 NKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E S++ S + ++G+C GKR+ +A ++D++ +PD I + + L
Sbjct: 149 LGYEPSIVTLSSL----LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E ++ + + G P Y + GL A L + + K D + N
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
Query: 336 ALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I S+ A+ F M KG P + T S+L LC + + ++ +
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ ++N ++ G+ EA + +M ++ +DPD+ YNSL+ C D L A
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEV------------------------------- 483
K++++ M + C ++ TYN LI F +
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Query: 484 ----GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
G+ + A ++F M+ GV PD TY+ LL+GLC L+ A EVF+ ++ L
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 504
Query: 540 RSILSTFMISLCR 552
I +T + +C+
Sbjct: 505 IYIYTTMIEGMCK 517
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 113/517 (21%), Positives = 217/517 (41%), Gaps = 68/517 (13%)
Query: 31 TPLLEQTLHQLGLRDSLSPSLVARVIN----PYLLTHHSLALGFF--NWASQ-------- 76
+ LL H G R S + +LV +++ P +T +L G F N AS+
Sbjct: 159 SSLLNGYCH--GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 77 -----QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQ 131
QPN ++Y ++ L + ++L +++ KI D ++ II SL +
Sbjct: 217 VQRGCQPNL----VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 272
Query: 132 GKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
++ A ++F E++ + I P + +SL++ L S G +A ++ +M + + +
Sbjct: 273 YRHVDDALNLFKEME--TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 190 IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKV 248
+ F I F + K + + D++ KR I+ + +++GFC R+++A ++
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRS---IDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
+ + ++C PD + Y + + F V + + ++ G+ T Y I GL
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTL 368
+ D +A F M+ G P + T
Sbjct: 448 DG----------------------------------DCDNAQKVFKQMVSDGVPPDIMTY 473
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
S L LC K ++ +EV+ + ++ D+ Y M+ +C +G++ + + + +
Sbjct: 474 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 533
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
KG+ P+V YN+++ C + LL+ A L +M G N TYN LI G+
Sbjct: 534 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAA 593
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+ L M DA+T L+ + + L +F
Sbjct: 594 SAELIREMRSCRFVGDAST-IGLVANMLHDGRLDKSF 629
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 200/470 (42%), Gaps = 16/470 (3%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
SLAL + + S ++ S+L ++I+ +++ Q+ D+ +
Sbjct: 137 SLALALLG-KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 125 IIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMS 181
+I L +A ++ + V+ C+ P + + V L G D AL + ++M
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQ---PNLVTYGVVVNGLCKRGDTDLALNLLNKME 252
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCK 238
+E + F I C+ + L++ E+ R N + S+I+ L +G
Sbjct: 253 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG--- 309
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
R +A ++L ++ ++ P+ + + + + F G E E + K + P
Sbjct: 310 --RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMI 357
Y + G + R+ +AK++ E +VS D N LI G S F M
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+G V T + L + L D +V+K + ++ D+ +Y++++ LC +G+L
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 487
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+A V M++ + D+ Y +++E C+ + L+ + G N+ TYN +I
Sbjct: 488 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
S ++ A L M E G P++ TY +L+ ++ + A+ E+
Sbjct: 548 SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAEL 597
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 93/204 (45%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F M++ +P++ + L + K K D ++ + + + + + +YN++++
Sbjct: 69 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 128
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C ++ A ++ +M + G +P + +SL+ C + A L DQM G
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ T+ LI + A+ L M+++G P+ TY ++ GLC+ + A +
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 248
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
NK + I +T + SLC+
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCK 272
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 16/170 (9%)
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+VE K+LSA M+ ++V++S RL +G+ YN L+
Sbjct: 85 IVEFNKLLSA---IAKMKKFDVVISLGEKMQRLEIVHGLYT-------------YNILIN 128
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
CR + A L +M G ++ T + L++ + I A+ L M+E G P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
D T+T+L+ GL A + ++ V + LC+R
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%)
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+L +A G+ M + P + +N L+ A + L ++M L TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
ILI+ F +I AL L M++ G P T +SLL G C + A + ++ V
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 189/435 (43%), Gaps = 15/435 (3%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+++S++ ++Q++ + ++ + + D+ Y +I + +A +F E
Sbjct: 165 FTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRE 224
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ P++ +L+ L + L M +M G +T + + +C
Sbjct: 225 LE------QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCRE 278
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
K + ML+E+ +N ++ +V +++ +C+ R+ A +V + ++++ C+P+
Sbjct: 279 QKAEEAEKMLNEMF--DNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVW 336
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + F +G V++ +L + R+ GV P Y I G ++ I A L ++
Sbjct: 337 TYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLM 396
Query: 323 VSGKFTIDDDVLNALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
D N LI ++ +D A F+ + +G P T + + LCK
Sbjct: 397 EGNGLAADQYTYNVLIDALCKTGKVD--EACSLFDGLEYRGIRPNSVTFNTVINGLCKGG 454
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K D + + + D +Y+ + LC + RE I EM +K + P Y
Sbjct: 455 KFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYT 514
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+++ +E A ++W QM + GCS ++ TY + + G + A + M +
Sbjct: 515 IVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKG 574
Query: 500 GVAPDATTYTSLLEG 514
G+ DA Y +L++G
Sbjct: 575 GIIVDAMAYNTLIDG 589
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 164/395 (41%), Gaps = 40/395 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L + +A + M G F I +C +L + D++
Sbjct: 133 NALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPL 192
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R S +V +I GFC+ RV+EA ++ EL +PD + + +
Sbjct: 193 RGFS--QDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAALVKGLCDARRG 246
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E +L+K ++LG P T Y + E++ EA+++
Sbjct: 247 EEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKM------------------- 287
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
N M + G VP T + + C+ + V V++ +
Sbjct: 288 ---------------LNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCE 332
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
++ +YN MV C G++ +A ++ +M+ G++PDV YN L+ C + + A +L
Sbjct: 333 PNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRL 392
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
M +G + + TYN+LI + G+++ A LF + +G+ P++ T+ +++ GLC+
Sbjct: 393 LRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCK 452
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A K V+ S F+ +LC+
Sbjct: 453 GGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCK 487
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 158/377 (41%), Gaps = 7/377 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NSL+ +D A +FD+M RG + + I FCE ++ + L + E+ +
Sbjct: 168 NSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ 227
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ ++ G C +R EE +L +++ +P AY + + +
Sbjct: 228 PD------MYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKA 281
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E E +L + G+ P + E R+ A + E + + NA+
Sbjct: 282 EEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAM 341
Query: 338 IGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ ++ A+ + M E G P + T + L + C + + +++ N
Sbjct: 342 VQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGL 401
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D +YNV++ LC +G++ EA + ++ +G+ P+ +N+++ C+ A
Sbjct: 402 AADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACT 461
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
++M ++GC+ + TY+ I + L ML+K V P YT +++ L
Sbjct: 462 FLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLF 521
Query: 517 QETNLQAAFEVFNKSVN 533
+E N A ++ + V+
Sbjct: 522 KERNYGLATRIWGQMVS 538
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/524 (18%), Positives = 194/524 (37%), Gaps = 67/524 (12%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL F Q +TH+ +++K L +R+ +L+++K + Y ++
Sbjct: 218 ALELFRELEQPDMYTHA-----ALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALV 272
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVE 186
+ + ++A + NE+ N C +++ +G + A+++F+ M +G E
Sbjct: 273 DLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCE 332
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRK--------RENSMINGSVIAV-------- 230
+ + + FC K+ + +++LD++R+ N +I G I
Sbjct: 333 PNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRL 392
Query: 231 -----------------LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
++I CK +V+EA + D L R +P+ + + V
Sbjct: 393 LRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCK 452
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
G L+K G AP T Y FI +C+ K E + + DV
Sbjct: 453 GGKFDVACTFLEKMVSAGCAPDTYTYSPFI------ENLCKTKGSREGLSFIDEMLQKDV 506
Query: 334 LNALIGSVSSID----PRS---AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
+ + ID R+ A + M+ G P + T + + C + E
Sbjct: 507 KPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAEN 566
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD-VSFY---NSLM 442
V + D +YN ++ + G+ A +++ M P+ +F+ L+
Sbjct: 567 VVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLL 626
Query: 443 EACCREDLLRPAKKLW------------DQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+ ED+ +W + M + + + Y ++ FSE ++
Sbjct: 627 QRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVT 686
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
L +M E + + YTSL+ C+ A+ + + H
Sbjct: 687 SLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGH 730
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/381 (17%), Positives = 148/381 (38%), Gaps = 29/381 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+++++++ L + + + L+++ D+ Y I +L + K +++ S +E
Sbjct: 441 VTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDE 500
Query: 145 VKFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ +D+ P N + + L + A +++ +M G + + + +C
Sbjct: 501 MLQ--KDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNE 558
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+L + +++ E++K +I ++ +I G + + A +L + P+
Sbjct: 559 GRLHEAENVVMEMKK--GGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHF 616
Query: 263 AYRIV---------AEEFKL----------MGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
+ I+ AE+ L + VFE ++KK V Y +
Sbjct: 617 TFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKN---SVPSSARAYLAIL 673
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRV 362
G ERR+ E L + +++D+ +L+ + A MI G +
Sbjct: 674 EGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFL 733
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P L + L ++D E+++ L +Y TD + +++ L G + +
Sbjct: 734 PNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDM 793
Query: 423 IQEMKRKGLDPDVSFYNSLME 443
I +++ P Y L E
Sbjct: 794 ISILEQMKCKPSDETYAMLTE 814
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/522 (21%), Positives = 218/522 (41%), Gaps = 54/522 (10%)
Query: 45 DSLSPSLVARVINPYLLTHHSLALGF--FNWASQQPNFTHSPLSYHSILKSLSLSRQINA 102
+ L+P L + ++N + LGF F W +++ +F S ++++ ++ L+ +
Sbjct: 56 EKLAPFLSSEIVNDVMREQRRPELGFRFFIWTTRRRSF-RSWVTHNLVIDMLAKDDGFDT 114
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK-FNCEDIGPEI--CNS 159
+L+++K + I + + +I + + +KA F ++K F C+ P++ NS
Sbjct: 115 YWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCK---PDVFTYNS 171
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
+L V+ AL ++++M + F + + C+N K L M DE+ ++
Sbjct: 172 ILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQK- 230
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+ ++I +I+ G C+ KR ++ ++L+ +++ C PD I + + F +G + E
Sbjct: 231 -GIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDE 289
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+L+ K G Y I GL +R E +E
Sbjct: 290 AFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQE---------------------- 327
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ M + G P + + L + C+ D + + ++ D
Sbjct: 328 ------------WCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPD 375
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
YN ++ C G L +A + E+ + P Y L+ CR LL A+++++
Sbjct: 376 TYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFN 435
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD--------ATTYTSL 511
QM GCS ++ T+N LI + GE+E A LF+ M E G P A
Sbjct: 436 QMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDT 494
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
G + + AF V ++ V + + ++ M CR+
Sbjct: 495 ANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRK 536
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 148/343 (43%), Gaps = 35/343 (10%)
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
E K N I +VLI + K E+A + +++ CKPD Y +
Sbjct: 120 EELKNSNIQIPPPTFSVLIA-AYAKSGMAEKAVESFGKMKDFGCKPDVFTYN------SI 172
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
+ + ++EV F+L L V ++ + L F I +
Sbjct: 173 LHVMVQKEV-------------------FLLALAVYNQMLK---LNYNPNRATFVI---L 207
Query: 334 LNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
LN L + + D A+ F+ M +KG P + + LC+ ++D++ + +
Sbjct: 208 LNGLCKNGKTDD---ALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKV 264
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ D + N ++ C G++ EA+ ++Q +++G + Y+SL++ R
Sbjct: 265 SGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDE 324
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
++ +MF +G ++ Y ILI F EVG ++ AL + ++M ++G++PD Y +L++
Sbjct: 325 VQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIK 384
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
G C L A + + +D + + +CR L+
Sbjct: 385 GFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLL 427
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 91/492 (18%), Positives = 192/492 (39%), Gaps = 47/492 (9%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL F+ +Q+ + + Y IL L +++ + + +L +KV+ DS ++
Sbjct: 220 ALKMFDEMTQK-GIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALL 278
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVE 186
+ +AF++ + +G + +SL+ L D + +M G+E
Sbjct: 279 DGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIE 338
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
+ + + I FCE + L+ML+++ +R + + +I GFC +++A
Sbjct: 339 PDVVLYTILIRGFCEVGMVDYALNMLNDMTQR--GLSPDTYCYNALIKGFCDVGLLDKAR 396
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
+ E+ +C P Y I+ G + E + + LG +P + I GL
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGL 456
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTL- 365
C+A EL E + +F+ +E G+ P+L
Sbjct: 457 ------CKAGELEE---------------------------ARHLFYK--MEIGKNPSLF 481
Query: 366 -------STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
+ + + + ++ ++ V + N Y ++++ C G+L
Sbjct: 482 LRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSV 541
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A+ + + R + E + +L + + L + F + + Y I +
Sbjct: 542 AFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLN-NFEIAPYTIWLI 600
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+ E AL++F + E + + + L+ GLC++ NL+ A ++F ++ ML
Sbjct: 601 GLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFML 660
Query: 539 ARSILSTFMISL 550
I + + SL
Sbjct: 661 MPRICNQLLRSL 672
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/484 (21%), Positives = 209/484 (43%), Gaps = 32/484 (6%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVN----KITLDSSVYRFIIPSLIQGKNTQKAFSV 141
S++++L + +R+ + D+ + +I + Y I+ SL + +A S+
Sbjct: 121 SHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSL 180
Query: 142 FNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
F+ ++ + P+ ++L++ LA +DNAL + DEM + GV+ + + +
Sbjct: 181 FSSLRR--RGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGC 238
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ + + +++ + + N + V++ G CK R +EA +V + +
Sbjct: 239 FRTGMFEKAMKVWEQLVRDPGASPNLATYKVML-DGLCKLGRFKEAGEVWSRMMANNHQA 297
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D + Y I+ G V V K G+ + Y I G CE G
Sbjct: 298 DTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGF------CEVGRTG 351
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGR------------VPTLST 367
E + KF D + I +++ + + + + M+ + P T
Sbjct: 352 E---AWKFW--DSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVT 406
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
L LC+ ++ E+ + + D+ SY+ M++ C GR +A V + M
Sbjct: 407 FGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMV 466
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
+ G P+ YN+L+ CR + A K++ +M ++GC + TYN LI + + +
Sbjct: 467 KDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQ 526
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
A L MLE+G PD TY SL+ GLC++ + A ++++ ++ + + + + +
Sbjct: 527 EASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILI 586
Query: 548 ISLC 551
LC
Sbjct: 587 HGLC 590
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/496 (21%), Positives = 210/496 (42%), Gaps = 51/496 (10%)
Query: 85 LSYHSILKSLSLSRQI-NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
++Y +++ L+ Q+ NA+D +L ++ + D+ Y ++ + +KA V+
Sbjct: 194 VTYSTLMSGLAKHDQLDNALD-LLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWE 252
Query: 144 EVKFNCEDIG--PEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
++ D G P + +L L G A +++ M + T+ +G+ I
Sbjct: 253 QL---VRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGL 309
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
C + + + ++ K +++ SV LI GFC+ R EA+K D +
Sbjct: 310 CRSGDVDSAARVYSDMVK-AGLVLDVSVYNSLI-KGFCEVGRTGEAWKFWDSTGFSGIR- 366
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKK-KRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
Y I+ + G V E +LK+ + +P + I GL A E+
Sbjct: 367 QITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEI 426
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRS--AIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
E + +D +++I D R+ A + M++ G P + L C
Sbjct: 427 LEDARNSGEELDVFSYSSMINRFCK-DGRTHDANEVYKNMVKDGCKPNSHVYNALINGFC 485
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+ +K ++ +++Y +++N + +YN ++ LC + + +EA + +EM +G PD+
Sbjct: 486 RVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIR 545
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASG------------------------------- 465
Y SL+ CR+ + A ++WD++ +G
Sbjct: 546 TYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEM 605
Query: 466 ----CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
CS NL TYN L+ F E+G I+ A L+ +L+ G+ PD TY + ++GLC
Sbjct: 606 KEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRT 665
Query: 522 QAAFEVFNKSVNHDVM 537
+ N+ + +M
Sbjct: 666 PEGVLLLNEVLATGIM 681
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/448 (20%), Positives = 185/448 (41%), Gaps = 3/448 (0%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
+ P + + +Y +L L + V ++ N D+ Y +I L + +
Sbjct: 256 RDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDV 315
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
A V++++ + + NSL+ G A K +D G+ T + +
Sbjct: 316 DSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITT-YNIM 374
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
++ + + +L ++ + + S V +IHG C+ AF++L++ R
Sbjct: 375 TKGLLDSGMVSEATELLKQL-ENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNS 433
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
+ D +Y + F G + V K K G P ++ Y I G +I +A
Sbjct: 434 GEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDA 493
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
++ + S N LI + + + A M+E+G P + T ++L +
Sbjct: 494 IKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRG 553
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LC+ K D + ++ + D+ +N+++ LC++G++ EA+ + EMK K P+
Sbjct: 554 LCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPN 613
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+ YN+LM+ + A LW + +G ++ TYN I + L +
Sbjct: 614 LVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLN 673
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQ 522
+L G+ P T++ L+ + + +Q
Sbjct: 674 EVLATGIMPTVITWSILVRAVIKYGPIQ 701
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 178/405 (43%), Gaps = 16/405 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSH----RGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
N+LL +A F +SH R + + + + + C + + +S+
Sbjct: 123 NTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFS 182
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
+R+R + V ++ G K +++ A +LDE+ + D + Y +
Sbjct: 183 SLRRR--GVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFR 240
Query: 274 MGSVFEREVVLKKK--RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
G +FE+ + + ++ R G +P Y+ + GL R EA E+ +++ D
Sbjct: 241 TG-MFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADT 299
Query: 332 DVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
LI G S D SA ++ M++ G V +S ++L K C+ ++ E +K
Sbjct: 300 VTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGE---AWKF 356
Query: 391 LSANDY--FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG-LDPDVSFYNSLMEACCR 447
+ + + +YN+M L SG + EA ++++++ PD + +L+ C
Sbjct: 357 WDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCE 416
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
A ++ + SG ++ +Y+ +I++F + G A ++ NM++ G P++
Sbjct: 417 NGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHV 476
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
Y +L+ G C+ + + A +++ + ++ +T + LC+
Sbjct: 477 YNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCK 521
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 13/133 (9%)
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG--------NLKTYNILISKFS 481
G +P V +N+L++A R A D FAS G NL+TYNI++
Sbjct: 114 GCNPGVRSHNTLLDAFVRARRYSDA----DAFFASLSHGAFGRRIAPNLQTYNIILRSLC 169
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
G+++ A+ LF ++ +GVAPD TY++L+ GL + L A ++ ++ N+ V A +
Sbjct: 170 ARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQ-ADA 228
Query: 542 ILSTFMISLCRRV 554
+ ++S C R
Sbjct: 229 VCYNALLSGCFRT 241
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 232/500 (46%), Gaps = 31/500 (6%)
Query: 64 HSLALGFFNWASQQ---PNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS 120
HS +++ Q+ P+F + + I++SL S++ + + + K++ D
Sbjct: 12 HSQVSELYDFMRQEGRLPSFGYVRM----IVESLVESKKFDNVLDLFKEMVGLGFRPDKL 67
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFD 178
VY + + ++ + + A +F +K + P + N L+ L + I +A K+F
Sbjct: 68 VYGRAMLAAVKLGDLKLAMELFETMKR--RKVVPNVFVYNVLIGGLCKEKRIRDAEKLFG 125
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFC 237
EMS R + + + F I +C+ ++ + + + ++K + + S+I ++ G C
Sbjct: 126 EMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEK---VEPSIITFNSLLSGLC 182
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK-LGVAPRT 296
K +R+EEA +L+E++ PD Y I+ + L+ S L R+ +G +
Sbjct: 183 KARRIEEARCMLNEIKCNGFVPDGFTYSIIFD--GLLKSDDGAGAALDLYREAIGKGVKI 240
Query: 297 NDYREFIL--GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFF 353
++Y IL GL E ++ +A+E+ + +V + + N ++ I D AI+
Sbjct: 241 DNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTI 300
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF---L 410
M +G P +++ C+ D+ E K + +E+YN+++ L
Sbjct: 301 EQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRL 360
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C R + +++EM+ G P+V Y SL+ C++ + A+ + M G N
Sbjct: 361 CVFSR---CFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNA 417
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN- 529
YN+LI VG++ ALR F M + G+ TY SL++GLC+ L+ A E+F
Sbjct: 418 NIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFL 477
Query: 530 -KSVNH--DVMLARSILSTF 546
S H DV+ S++S +
Sbjct: 478 ITSTGHCPDVITYNSLISGY 497
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/472 (21%), Positives = 213/472 (45%), Gaps = 42/472 (8%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N + +++++++ + +++ + +++K K+ + ++ L + + ++A
Sbjct: 131 NLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEA 190
Query: 139 FSVFNEVKFNCEDIGPE-ICNSLL--AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
+ NE+K C P+ S++ +L SD AL ++ E +GV+ +
Sbjct: 191 RCMLNEIK--CNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSIL 248
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
+ C+ K+ + +L + E+ ++ G VI I++G+C+ ++ A ++++ R
Sbjct: 249 LNGLCKEGKVEKAEEVLKSLV--EHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESR 306
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
+P+ IA+ V ++F M + + E +KK G+AP Y I G R+C
Sbjct: 307 GLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGY---GRLC-- 361
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ S F I ++ M E G P + + +L L
Sbjct: 362 ------VFSRCFQILEE-----------------------MEENGEKPNVISYGSLINCL 392
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
CK K E V + + + YN+++ CT G+LREA EM + G+ +
Sbjct: 393 CKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATI 452
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YNSL++ C+ L+ A++++ + ++G ++ TYN LIS +S G + L L+
Sbjct: 453 VTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYET 512
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
M + G+ P T+ L+ G C + ++ +FN+ + ++ R + + +
Sbjct: 513 MKKLGLKPTINTFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMI 563
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 177/389 (45%), Gaps = 16/389 (4%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
DN L +F EM G + +G + + L + + + +++R+ ++ +
Sbjct: 48 DNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRK--VVPNVFVYN 105
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I G CK KR+ +A K+ E+ +R P+ + + + + + G V + ++ +K
Sbjct: 106 VLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKE 165
Query: 291 GVAPRTNDYREFILGLIVERRICEAK-ELGEVIVSG----KFT---IDDDVLNALIGSVS 342
V P + + GL RRI EA+ L E+ +G FT I D +L + G+ +
Sbjct: 166 KVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGA 225
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
++D + I KG T S L LCK K ++ EV K L +
Sbjct: 226 ALD------LYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVI 279
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN +V+ C G + A I++M+ +GL P+ +NS+++ C ++ A++ +M
Sbjct: 280 YNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMV 339
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G + +++TYNILI + + ++ M E G P+ +Y SL+ LC++ +
Sbjct: 340 GKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKIL 399
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLC 551
A V V V+ +I + + C
Sbjct: 400 EAEMVLRDMVGRGVLPNANIYNMLIDGSC 428
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 117/519 (22%), Positives = 201/519 (38%), Gaps = 85/519 (16%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN-TQKAFSV 141
S ++++S+L L +R+I +L ++K N D Y I L++ + A +
Sbjct: 170 SIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDL 229
Query: 142 FNEV--------KFNC----------------EDI-----------GPEICNSLLAVLAS 166
+ E + C E++ G I N+++
Sbjct: 230 YREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQ 289
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
G +D A+ ++M RG+ + I F I KFCE + M+D+ + M+
Sbjct: 290 IGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCE-------MQMIDKAEEWVKKMVGKG 342
Query: 227 VIAV-----LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
+ ++I G+ + F++L+E+ KP+ I+Y + G + E E
Sbjct: 343 IAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAE 402
Query: 282 VVLKKKRKLGVAPRTN-----------------------------------DYREFILGL 306
+VL+ GV P N Y I GL
Sbjct: 403 MVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGL 462
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTL 365
++ EA+E+ +I S D N+LI S+ + + + + M + G PT+
Sbjct: 463 CKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTI 522
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
+T L K + ++L N D YN M+ +G +++A+ + +E
Sbjct: 523 NTFHPLISGCSKEGIKLKETLFNEMLQMN-LSPDRVVYNAMIHCYQETGHVQKAFSLQKE 581
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M G+ PD YNSL+ +E L K L D M A G TY++LI ++ +
Sbjct: 582 MVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKD 641
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
GA + MLE G P+ L GL ++ LQ A
Sbjct: 642 FNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEA 680
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 153/396 (38%), Gaps = 54/396 (13%)
Query: 51 LVARVINPYLLTHHSLALGF---------FNWASQQPNFTHSP--LSYHSILKSLSLSRQ 99
+V + I P + T++ L G+ F + P +SY S++ L +
Sbjct: 338 MVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGK 397
Query: 100 INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC-- 157
I + VL+ + + ++++Y +I ++A F+E+ N IG I
Sbjct: 398 ILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKN--GIGATIVTY 455
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NSL+ L G + A +MF ++ G I + I + NA Q L E K
Sbjct: 456 NSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGY-SNAGNSQKCLELYETMK 514
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + LI +G +++E + +E+ PD + Y + ++ G V
Sbjct: 515 KLGLKPTINTFHPLISGCSKEGIKLKET--LFNEMLQMNLSPDRVVYNAMIHCYQETGHV 572
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ + K+ +GV P Y ILG + E ++ E K+L + + + + D + L
Sbjct: 573 QKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLL 632
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G D A V++ M+E G +P + + LS L K
Sbjct: 633 IQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRK------------------- 673
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
GRL+EA + EM G+D
Sbjct: 674 ----------------DGRLQEAQSICSEMIANGMD 693
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 81/201 (40%), Gaps = 35/201 (17%)
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
++FM ++GR+P+ + + ++L + K D +++++K
Sbjct: 18 LYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFK---------------------- 55
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
EM G PD Y M A + L+ A +L++ M N+
Sbjct: 56 -------------EMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVF 102
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
YN+LI + I A +LF M + + P+ T+ +L++G C+ + A + +
Sbjct: 103 VYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERM 162
Query: 532 VNHDVMLARSILSTFMISLCR 552
V + ++ + LC+
Sbjct: 163 KKEKVEPSIITFNSLLSGLCK 183
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 110/504 (21%), Positives = 217/504 (43%), Gaps = 41/504 (8%)
Query: 86 SYHSILKSLSLSRQINAIDSVL-KQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++ +L+ L S ++ + +L +++ ++ D I+ L ++T A ++F++
Sbjct: 12 TFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDK 71
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + +L+ L +D A+ + +M RG+ T+ V I C +
Sbjct: 72 MA-ELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGR 130
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L L + R+ ++ + ++HG K R+ +A +VL E+ PD
Sbjct: 131 LRHALGVY---RQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTL 187
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL--GEV- 321
+V + L V + ++++ G+A Y + GL R+ EA L GEV
Sbjct: 188 TVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVT 247
Query: 322 -------IVSGKFTIDD-----------DVL------------NALIGS-VSSIDPRSAI 350
IV+ ID D+ N+LIG + D AI
Sbjct: 248 RRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAI 307
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
M++ P + T + L CK + D+ E+++ + AN D+ ++ +V L
Sbjct: 308 RLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGL 367
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C GR+ +A +++E+ R+G P + YN +++ C+ + +R A++L + G N
Sbjct: 368 CGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNT 427
Query: 471 KTYNILISKFSEVGEIEGALRLFHNM-LEKGVAPDATT-YTSLLEGLCQETNLQAAFEVF 528
TYNIL++ G + AL+ + E G P + Y +L+ LC++ A + +
Sbjct: 428 VTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFY 487
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
+ + + A + +T + +LC+
Sbjct: 488 EEMIQRGYVPAAATFATVVFALCK 511
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/507 (20%), Positives = 220/507 (43%), Gaps = 34/507 (6%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
+ A+ F+ ++ H+ +Y++++ L +R ++ +L +K + + ++
Sbjct: 63 TTAMALFDKMAELGAVNHT--TYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNV 120
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE---ICNSLLAVLASDGYIDNALKMFDEM- 180
+I L + + A V+ ++ D P L+ L+ G + +A+++ EM
Sbjct: 121 VIGGLCRAGRLRHALGVYRQMN----DAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMV 176
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
S R V +T V + C ++ +++E+ R M ++ ++ G CK +
Sbjct: 177 SARHVPDNTT-LTVVVQSLCLGDRVDDARELVEEMLHR--GMAANAITYSALVDGLCKCE 233
Query: 241 RVEEAFKVL-DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
R++EA +L E+ R PD + Y V + G + + + ++ + AP Y
Sbjct: 234 RLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE---MSCAPTAITY 290
Query: 300 REFILGLIVERRICEAKELGEVI-VSGKFTIDDDVLNALIGSVSSIDP-------RSAIV 351
I G C A ++ E I + GK +DD+ +I + + A
Sbjct: 291 NSLIGG------YCRAGDMDEAIRLLGKM-VDDNCAPDVITYTTLMSAFCKMGRLDDAYE 343
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F M+ P + T ++L LC + ++ +E+ + ++ + +YN +V C
Sbjct: 344 LFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYC 403
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG--CSGN 469
S ++R+A ++ + + +G P+ YN L+ CCR A + DQ+ + G C +
Sbjct: 404 KSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTS 463
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ Y I++ G + A++ + M+++G P A T+ +++ LC+ Q A E+
Sbjct: 464 VAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLE 523
Query: 530 KSVNHDVMLARSILSTFMISLCRRVLI 556
+ + + + + CR +I
Sbjct: 524 EMIKYGHTPGPGTCDAVVSAYCRAGMI 550
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/467 (20%), Positives = 197/467 (42%), Gaps = 33/467 (7%)
Query: 53 ARVINPYLLTHHSL------------ALGFFNWASQQPNFTHSP--LSYHSILKSLSLSR 98
+R +NP L H+ + ALG + +Q N H P L+Y ++ LS +
Sbjct: 108 SRGMNPGTLLHNVVIGGLCRAGRLRHALGVY----RQMNDAHPPDFLTYTKLVHGLSKAG 163
Query: 99 QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN 158
++ VL+++ + D++ ++ SL G A + E+ +
Sbjct: 164 RLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYS 223
Query: 159 SLLAVLASDGYIDNALKMF-DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
+L+ L +D A+ + E++ RG + + I C+ +L + + +E+
Sbjct: 224 ALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSC 283
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ S+I G+C+ ++EA ++L ++ C PD I Y + F MG +
Sbjct: 284 APTAITYNSLIG-----GYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRL 338
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ + ++ ++P + + GL E R+ +A EL E I N +
Sbjct: 339 DDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCV 398
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA--N 394
+ G S R A +G VP T + L C+ ++D+ ++ L++
Sbjct: 399 VDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGG 458
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
T + Y +++ LC GR +A +EM ++G P + + +++ A C+ + A
Sbjct: 459 PCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQA 518
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA------LRLFHN 495
+L ++M G + T + ++S + G I+ A LRL+ +
Sbjct: 519 HELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRLYTD 565
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/501 (22%), Positives = 207/501 (41%), Gaps = 21/501 (4%)
Query: 72 NWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLK----------QVKVNKITLDSSV 121
NW S P F H+ SY ++ LS + S+++ V LD++
Sbjct: 89 NWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAG 148
Query: 122 YR---FIIPSLI----QGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNAL 174
R F+ +L+ A F V+ + I C LL + +
Sbjct: 149 TRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIW 208
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIH 234
+ E+ G + + I KFC+ + + +E+RKR + +V +I+
Sbjct: 209 TFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKR--GLRPTTVSFNTLIN 266
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
G CK + ++E F++ + PD Y ++ G + E + + ++ G+ P
Sbjct: 267 GLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRP 326
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFF 353
+ I G RR+ A +++ D + N L+ + + D A
Sbjct: 327 NGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLV 386
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
+ M G P T + L CK + +E+ K ++ D ++ ++S C
Sbjct: 387 DEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRD 446
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
GR+R+A ++EM G+ PD + Y +++ C++ ++ KL +M +G + TY
Sbjct: 447 GRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITY 506
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN-KSV 532
N+L++ + G+++ A L ML GV PD TY LLEG C+ + ++ N K +
Sbjct: 507 NVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGL 566
Query: 533 NHDVMLARSILSTFMISLCRR 553
D S++S + SL R
Sbjct: 567 IVDYAYYTSLVSEYNKSLKDR 587
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 200/433 (46%), Gaps = 12/433 (2%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSH 182
++ SL++ QK F+ V C+ + P++ + + G ++ A+K+F +M
Sbjct: 232 LLTSLVRANEFQKCCEAFDVV---CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 288
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR--ENSMINGSVIAVLIIHGFCKGK 240
GV + + F I + + +++ +R E ++I S++ + G + K
Sbjct: 289 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL----VKGLTRAK 344
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
R+ +A+ VL E+ + P+ I Y + + F GS+ + + G++ ++ Y
Sbjct: 345 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 404
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS-IDPRSAIVFFNFMIEK 359
I G + A+ L + ++S F ++ ++I + S + SA+ F M+ +
Sbjct: 405 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 464
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
P L+ L LCK K + +E++ + D + N ++ LC +G+L EA
Sbjct: 465 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ + +E+ +G D YN+L+ CC + L A D+M G + TY+ILI
Sbjct: 525 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 584
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ ++E A++ + + G+ PD TY+ +++G C+ + E F++ ++ +V
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 540 RSILSTFMISLCR 552
+ + + + CR
Sbjct: 645 TVVYNHLIRAYCR 657
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/477 (20%), Positives = 194/477 (40%), Gaps = 36/477 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++K L+ +++I VLK++ + VY +I S I+ + KA + +
Sbjct: 331 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL 390
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + N+L+ +G DNA ++ EM G + F I C +
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM 450
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLI-------------------------------- 232
L + E+ R N G ++ LI
Sbjct: 451 FDSALRFVGEMLLR-NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509
Query: 233 --IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+HG C+ +++EAF++ E+ R C D ++Y + + E + L + K
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G+ P Y I GL ++ EA + + D + +I G +
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
FF+ M+ K P ++L + C+ + +E+ + + + +Y ++
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
+ R+ EA + +EM+ +GL+P+V Y +L++ + + + L +M + N
Sbjct: 690 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
TY ++I ++ G + A RL + M EKG+ PD+ TY + G ++ + AF+
Sbjct: 750 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 93/197 (47%)
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
KG P + + CK K +E V+++ + ++ ++N ++ L GR E
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A+ ++M +G++P + Y+ L++ R + A + +M G N+ YN LI
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
F E G + A+ + M+ KG++ ++TY +L++G C+ A + + ++ +
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 539 ARSILSTFMISLCRRVL 555
+ ++ + LC ++
Sbjct: 434 NQGSFTSVICLLCSHLM 450
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN + Y+ ++++ S +++ + + +K I+ +S+ Y +I + +
Sbjct: 642 QPN----TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALK---MFDEMSHRGVEFSTIGFG 193
+A +F E++ E + P + + A++ G + +K + EM + V + I +
Sbjct: 698 EAKLLFEEMRM--EGLEPNVFH-YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 754
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
V I + + + + +L+E+R E ++ S+ I+G+ K V EAFK DE
Sbjct: 755 VMIGGYARDGNVTEASRLLNEMR--EKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>gi|147790305|emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
Length = 722
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 194/467 (41%), Gaps = 73/467 (15%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+++L+ G A +F + +G + +W C+ + L++L ++K
Sbjct: 192 NLLISMLSKAGMAREAHFVFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLKK 251
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ + +++GF K EEAF +LDE++I CKP+ I Y ++ + G +
Sbjct: 252 M--GAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRI 309
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ +L K K G P Y + L + R E EL +VI + + D AL
Sbjct: 310 GDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAAL 369
Query: 338 IGSV--------------------SSIDPRSAIVFFNF----------------MIEKGR 361
G + ++D ++F+ M+EKG
Sbjct: 370 TGGLLKRGQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGL 429
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS------------- 408
VPT + + + C+ N DE ++++ + D+ S+N ++S
Sbjct: 430 VPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRR 489
Query: 409 ----------------------FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
+ C G++ E +++ M R GL+P V +N L++ C
Sbjct: 490 VLYRMEYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLC 549
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ LL A +++ + +G N +YNILI G +L +M + PDA
Sbjct: 550 KNGLLGTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAV 609
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
TY S ++GLC+E + A ++ ++ + + +I +T + ++ +R
Sbjct: 610 TYGSFIKGLCKEGKISVAIQLRDQMLESGLTPTVTIYNTILAAMFQR 656
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 135/353 (38%), Gaps = 44/353 (12%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L L G + A K+ + G + ++ C K G+ LS+L +
Sbjct: 368 ALTGGLLKRGQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMV-- 425
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR-IVAEEFKLMGSV 277
E ++ +V I++GFC+ ++EA ++ D PD +++ I++ K S
Sbjct: 426 EKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSS 485
Query: 278 FEREVVLKKKR---KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
R V+ + + KL V T + F
Sbjct: 486 MIRRVLYRMEYEGVKLNVVSSTCLIQYF-------------------------------- 513
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
IG +S + MI G PT+ T + L LCK +++
Sbjct: 514 -CAIGKISE-----CLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNT 567
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
YF + SYN+++ G ++++M L PD Y S ++ C+E + A
Sbjct: 568 GYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEGKISVA 627
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+L DQM SG + + YN +++ + G+ + L +M G P+A +
Sbjct: 628 IQLRDQMLESGLTPTVTIYNTILAAMFQRGKFWDIVSLLKDMTMDGCEPNAVS 680
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 3/189 (1%)
Query: 327 FTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
FT +L +G S +D S F FM+ PT TL+ L L K + E
Sbjct: 153 FTSLLKILKKWLGLGSLVDSMSV---FEFMLRLEYFPTEPTLNLLISMLSKAGMAREAHF 209
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
V++VL SYN ++ LC G+ A ++ +K+ G + + Y +L+
Sbjct: 210 VFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFS 269
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+E L A + D+M GC N+ TY +++ + G I AL + M ++G PD
Sbjct: 270 KEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIV 329
Query: 507 TYTSLLEGL 515
TY +L L
Sbjct: 330 TYNVILREL 338
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 8/244 (3%)
Query: 294 PRTNDYREFILGLI--VERRICEAKELGEVIVS----GKFTIDDDVLNALI-GSVSSIDP 346
P NDY + + R + EL +V G + + N L+ G S+ +
Sbjct: 76 PSVNDYNALLYHYLKSSSRHLIVLDELVQVYFGMKRLGPYP-NASTFNILLDGMTSTGNL 134
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
R+A F M G +P+ ++L + K + + V++ + +YF + N++
Sbjct: 135 RAAFFFAEEMWRSGFLPSFTSLLKILKKWLGLGSLVDSMSVFEFMLRLEYFPTEPTLNLL 194
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+S L +G REA+ V + + KG YN ++ A C+ A L + G
Sbjct: 195 ISMLSKAGMAREAHFVFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLKKMGA 254
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
N +Y L+ FS+ G E A + M G P+ TYT +++ LC E + A +
Sbjct: 255 VHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALD 314
Query: 527 VFNK 530
+ K
Sbjct: 315 ILGK 318
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 172/371 (46%), Gaps = 16/371 (4%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G + AL++F E + + S++ + V I FC + L S+L E+ E N
Sbjct: 5 GSHNQALQLFRENPCQ-LPASSVTYNVLIRGFCNASDLDAAFSLLREM-DVEGMQCNDRT 62
Query: 228 IAVLIIHGFCKGKRVEEAFKVLD-ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
++ I+ G C+ RV +A + D L + +PD ++Y + +G V +
Sbjct: 63 TSI-ILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRV---DAAFDL 118
Query: 287 KRKL----GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV- 341
RK+ G P Y + GL + R+ A+ + F D N L+ ++
Sbjct: 119 FRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALF 178
Query: 342 --SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+D A+ F M E+G VPTL + + + LC+ + + +EV+ + D+ +
Sbjct: 179 QLGRVD--EALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPN 236
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ +Y+V++ LC S +L EA ++ M +G PD+ Y L+ L A L
Sbjct: 237 LVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLR 296
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M + GC ++ TY ++I K +VG ++ A +F ++ +P+ TY++L+ G C+ +
Sbjct: 297 RMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRAS 356
Query: 520 NLQAAFEVFNK 530
+ +V +
Sbjct: 357 RVDEGGKVMRE 367
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 169/413 (40%), Gaps = 24/413 (5%)
Query: 114 KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNA 173
++ S Y +I + AFS+ E+ + +L L G + A
Sbjct: 20 QLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQA 79
Query: 174 LKMFD---EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK-------RENSMI 223
L+ FD E++H + + + I C KLG+V + D RK R N+
Sbjct: 80 LEHFDASLELAH--AQPDVVSYTTLINGLC---KLGRVDAAFDLFRKMVAAGGCRPNAFT 134
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
+ ++ G CK R++ A V+ E R R+ PD + Y + +G V E
Sbjct: 135 YNA-----LVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALAT 189
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
+ + G P + I GL RR+ +A E+ ++ F + + +I +
Sbjct: 190 FTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCK 249
Query: 344 IDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
D A + M+ +G P L + L + D + + + + + D+ +
Sbjct: 250 SDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVT 309
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y V++ LC GR+ +A+ + +E+ P+V Y++L+ CR + K+ +M
Sbjct: 310 YTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM- 368
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
C N+ TYN +I S V E A +F M E G PDA TY L L
Sbjct: 369 --ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 3/221 (1%)
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV-LS 392
N LI G ++ D +A M +G T S + + LC+ + + +E + L
Sbjct: 29 NVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLE 88
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM-KRKGLDPDVSFYNSLMEACCREDLL 451
D+ SY +++ LC GR+ A+ + ++M G P+ YN+L++ C++D L
Sbjct: 89 LAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRL 148
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A+ + + + ++ TYN L++ ++G ++ AL F M E+G P ++ ++
Sbjct: 149 DAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAI 208
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ GLC+ L A EVFN+ ++ D S + LC+
Sbjct: 209 ITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCK 249
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 135/339 (39%), Gaps = 38/339 (11%)
Query: 218 REN--SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
REN + SV ++I GFC ++ AF +L E+ + + + I+ + G
Sbjct: 15 RENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCG 74
Query: 276 SVFEREVVLKKKRKLGVA-PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
V + +L A P Y I GL +LG V
Sbjct: 75 RVAQALEHFDASLELAHAQPDVVSYTTLINGLC---------KLGRV------------- 112
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRV-PTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
+A F M+ G P T + L LCK+++ D V
Sbjct: 113 ------------DAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARK 160
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
D+ D+ +YN +++ L GR+ EA +M +G P + +N+++ CR L
Sbjct: 161 RDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLAD 220
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A +++++M NL TY+++I + +++ A +L M+ +G PD YT L+
Sbjct: 221 ALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVL 280
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
G L +A + + V+ + + + LC+
Sbjct: 281 GFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCK 319
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 200/433 (46%), Gaps = 12/433 (2%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSH 182
++ SL++ QK F+ V C+ + P++ + + G ++ A+K+F +M
Sbjct: 221 LLTSLVRANEFQKCCEAFDVV---CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 277
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR--ENSMINGSVIAVLIIHGFCKGK 240
GV + + F I + + +++ +R E ++I S++ + G + K
Sbjct: 278 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL----VKGLTRAK 333
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
R+ +A+ VL E+ + P+ I Y + + F GS+ + + G++ ++ Y
Sbjct: 334 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 393
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS-IDPRSAIVFFNFMIEK 359
I G + A+ L + ++S F ++ ++I + S + SA+ F M+ +
Sbjct: 394 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 453
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
P L+ L LCK K + +E++ + D + N ++ LC +G+L EA
Sbjct: 454 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 513
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ + +E+ +G D YN+L+ CC + L A D+M G + TY+ILI
Sbjct: 514 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 573
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ ++E A++ + + G+ PD TY+ +++G C+ + E F++ ++ +V
Sbjct: 574 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 633
Query: 540 RSILSTFMISLCR 552
+ + + + CR
Sbjct: 634 TVVYNHLIRAYCR 646
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/477 (20%), Positives = 194/477 (40%), Gaps = 36/477 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++K L+ +++I VLK++ + VY +I S I+ + KA + +
Sbjct: 320 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL 379
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + N+L+ +G DNA ++ EM G + F I C +
Sbjct: 380 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM 439
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLI-------------------------------- 232
L + E+ R N G ++ LI
Sbjct: 440 FDSALRFVGEMLLR-NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 498
Query: 233 --IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+HG C+ +++EAF++ E+ R C D ++Y + + E + L + K
Sbjct: 499 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 558
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G+ P Y I GL ++ EA + + D + +I G +
Sbjct: 559 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 618
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
FF+ M+ K P ++L + C+ + +E+ + + + +Y ++
Sbjct: 619 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 678
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
+ R+ EA + +EM+ +GL+P+V Y +L++ + + + L +M + N
Sbjct: 679 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 738
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
TY ++I ++ G + A RL + M EKG+ PD+ TY + G ++ + AF+
Sbjct: 739 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 795
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 93/197 (47%)
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
KG P + + CK K +E V+++ + ++ ++N ++ L GR E
Sbjct: 243 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 302
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A+ ++M +G++P + Y+ L++ R + A + +M G N+ YN LI
Sbjct: 303 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 362
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
F E G + A+ + M+ KG++ ++TY +L++G C+ A + + ++ +
Sbjct: 363 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 422
Query: 539 ARSILSTFMISLCRRVL 555
+ ++ + LC ++
Sbjct: 423 NQGSFTSVICLLCSHLM 439
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN + Y+ ++++ S +++ + + +K I+ +S+ Y +I + +
Sbjct: 631 QPN----TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 686
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALK---MFDEMSHRGVEFSTIGFG 193
+A +F E++ E + P + + A++ G + +K + EM + V + I +
Sbjct: 687 EAKLLFEEMRM--EGLEPNVFH-YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 743
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
V I + + + + +L+E+R E ++ S+ I+G+ K V EAFK DE
Sbjct: 744 VMIGGYARDGNVTEASRLLNEMR--EKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 799
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 202/460 (43%), Gaps = 52/460 (11%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+S++ L ++ +++ VL+++ N + Y ++ + + +A + E
Sbjct: 81 VTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIRE 140
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMF-------DEMSHRGVEFSTIGFGVFIW 197
+ +CN ++ + G+ + + DEM G + + FI
Sbjct: 141 MILR-----GSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYNTFIS 195
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
C+ KL + L ML+E+ + + V II G CK R+++AF+V + R C
Sbjct: 196 GLCKAGKLDKGLEMLEEMDR--GGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGC 253
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLK--KKRKLGVAPRTNDYREFILGLIVERRICEA 315
PD + Y I+ + + + VL+ + K G + FI
Sbjct: 254 VPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFI------------ 301
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
G + SGKF + N L+G MIE G +P L + + + L
Sbjct: 302 ---GALCRSGKFPL---AKNILLG----------------MIESGSLPNLLSYNFVIDGL 339
Query: 376 CKRNKSDELVEVY-KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD-P 433
CK D+ ++ K+L + D+ +N ++S C +GRL +A+ ++ EMK K + P
Sbjct: 340 CKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVP 399
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
DV YN+L++ + L+ AK L +M A GC N+ TY LI+ +++ G E A LF
Sbjct: 400 DVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLF 459
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
M KG PD TY ++L + + A V+ + N
Sbjct: 460 DEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKN 499
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 171/377 (45%), Gaps = 12/377 (3%)
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M+ G + S + + I C++ L ++L ++ + V +I G CK
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA--DAGCAPNVVTYTALIDGLCKA 58
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+R +A + + + C+PD + Y + + + + +VL++ + G AP Y
Sbjct: 59 RRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITY 118
Query: 300 REFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIG--SVSSIDPRSAIVFFNFM 356
++ RR+ +A+ L E+I+ G ++ + G R + M
Sbjct: 119 STLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEM 178
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
IE GR+P + T + LCK K D+ +E+ + + D+ ++ ++S LC + R+
Sbjct: 179 IESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRI 238
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA--SGCSGNLKTYN 474
+A+ V + M +G PD Y+ +++ R + L ++ + M A +GC + T+N
Sbjct: 239 DDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHN 298
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
I G+ A + M+E G P+ +Y +++GLC+ N+ A+++ K ++
Sbjct: 299 AFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDS 358
Query: 535 -----DVMLARSILSTF 546
DV+ +++S F
Sbjct: 359 GCCKPDVIFFNTLISGF 375
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 172/407 (42%), Gaps = 18/407 (4%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALK 175
D Y I L + K + E+ I P++ S+++ L ID+A +
Sbjct: 186 DVVTYNTFISGLCKAGKLDKGLEMLEEMDRG--GIPPDVVTFCSIISGLCKANRIDDAFQ 243
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+F M RG ++ + + + +N L +DEV + +M G V+ V +
Sbjct: 244 VFKGMLERGCVPDSLTYSIML----DNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNA 299
Query: 236 F----CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
F C+ + A +L + P+ ++Y V + G+V + + +K G
Sbjct: 300 FIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSG 359
Query: 292 VA-PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV-LNALIGSVSSIDP-RS 348
P + I G R+ +A +L + + + D V N LI S +
Sbjct: 360 CCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQ 419
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A + M G P + T + L K +E ++ +SA F D+ +YN ++S
Sbjct: 420 AKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLS 479
Query: 409 FLCTSGRLREAYGVIQEMKRKG--LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+G + +A GV Q++K K PD Y L++ CR + L +M A G
Sbjct: 480 AFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGW 539
Query: 467 SGNLKTYNILISKFSEVGEIEG-ALRLFHNMLEKGVAPDATTYTSLL 512
S + TYN+LI+K +E E+ AL ++ ML++ P A+ + SL+
Sbjct: 540 SCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLV 586
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 126/330 (38%), Gaps = 73/330 (22%)
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ Y + + G + + +L+K G AP Y I GL RR
Sbjct: 11 VTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR---------- 60
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
P AI M+ G P L T ++L LC N+
Sbjct: 61 ------------------------PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRM 96
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG--------LD- 432
D+ V + L N + + +Y+ +V + C RL +A G+I+EM +G +D
Sbjct: 97 DDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDC 156
Query: 433 ----------------------------PDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
PDV YN+ + C+ L ++ ++M
Sbjct: 157 IFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 216
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G ++ T+ +IS + I+ A ++F MLE+G PD+ TY+ +L+ L + L
Sbjct: 217 GIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTV 276
Query: 525 FEVFN--KSVNHDVMLARSILSTFMISLCR 552
EV +++ ++ + F+ +LCR
Sbjct: 277 DEVLEHMQAMKAGCVMEVYTHNAFIGALCR 306
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%)
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M G D V Y +L++ C+ L A+ L +M +GC+ N+ TY LI +
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
A++ ML G PD TY SL+ GLC + A V + V + ST
Sbjct: 61 PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120
Query: 546 FMISLCRR 553
+I CRR
Sbjct: 121 LVIWNCRR 128
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 214/470 (45%), Gaps = 24/470 (5%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKV---NKITLDSSVYRFIIPSLIQGK 133
Q + L+Y+++LK L ++ A D L+ + + D Y ++ L + +
Sbjct: 430 QEGIEPTVLTYNTLLKGLC---RVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKME 486
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
N + A +++ ++ N++++ L G + A ++FD+M G I +
Sbjct: 487 NFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 546
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV-IAVLIIHGFCKGKRVEEAFKVLDEL 252
I +C+ + +GQ + + E I+ S+ + +I G K +R+ E +L E+
Sbjct: 547 TLIDGYCKASNVGQAFKVKGAM---EREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEM 603
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
IR P+ + Y + + + G + + + + G++ + GL RI
Sbjct: 604 GIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRI 663
Query: 313 CEAKELGEVIVSGKFTID------DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
EA L + +V F D D+ A I ++ S F +P
Sbjct: 664 DEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFL--------LPNNI 715
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
+ LCK K D+ + +LS + D +Y ++ +G + EA+ + EM
Sbjct: 716 VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEM 775
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
R+GL P++ YN+L+ C+ + + A++L+ ++ G N+ TYN LI + ++G +
Sbjct: 776 LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNM 835
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+ A +L M+E+G++P TY++L+ GLC+ +++ + ++ N+ + V
Sbjct: 836 DAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGV 885
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 200/489 (40%), Gaps = 53/489 (10%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQ-VKVNKITLDSSVYR 123
+ +LGFF + S+Q NF + SY ++ LS R + + L Q V + K +V
Sbjct: 83 TASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNV-- 140
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR 183
I L+ V+ E F+ P + + +L V G NAL +FD M
Sbjct: 141 -IWDELV---------GVYREFAFS-----PTVFDMILKVYVEKGLTKNALYVFDNMGKC 185
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G S + +N + + ++ + ++ + ++++ FCK +V+
Sbjct: 186 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRV--GIVPDVFMVSIMVNAFCKDGKVD 243
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
EA + ++ +P+ + Y + + +G V + VLK + GV+ Y I
Sbjct: 244 EAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLI 303
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVP 363
G + ++ EA++ V E VP
Sbjct: 304 KGYCKQCKMDEAEK---------------------------------VLRGMQEEAALVP 330
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
L C+ K D+ V + + T++ N +++ C G + EA GVI
Sbjct: 331 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 390
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
M L PD YN+L++ CRE A L D+M G + TYN L+ V
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 450
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
G + AL+++H M++ GVAPD Y++LL+GL + N + A ++ + +R
Sbjct: 451 GAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 510
Query: 544 STFMISLCR 552
+T + LC+
Sbjct: 511 NTMISGLCK 519
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/502 (22%), Positives = 211/502 (42%), Gaps = 41/502 (8%)
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
+S++ +I+ + V+ ++ + DS Y ++ + +T +AF++ + K
Sbjct: 371 NSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCD--KM 428
Query: 148 NCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
E I P + N+LL L G D+AL+++ M GV +G+ + +
Sbjct: 429 LQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENF 488
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
++ ++ R + +I G CK ++ EA ++ D+++ C PD I YR
Sbjct: 489 EGASTLWKDILAR--GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 546
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVS 324
+ + + +V + V + ++P Y I GL RR+ E +L E+ +
Sbjct: 547 TLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIR 606
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
G T + ALI G A + M E G + S + L + + DE
Sbjct: 607 G-LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDE 665
Query: 384 LVEVYKVLSANDYFTDMES--------------------------------YNVMVSFLC 411
+ + + + +F D E YN+ ++ LC
Sbjct: 666 ANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLC 725
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+G++ +A + KG PD Y +L+ + A +L D+M G N+
Sbjct: 726 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIV 785
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
TYN LI+ + ++ A RLFH + +KG+ P+ TY +L++G C+ N+ AAF++ +K
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845
Query: 532 VNHDVMLARSILSTFMISLCRR 553
+ + + S + LC+
Sbjct: 846 IEEGISPSVVTYSALINGLCKH 867
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 188/443 (42%), Gaps = 43/443 (9%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
FT S +++++++ L ++ + + ++K + D YR +I + N +AF
Sbjct: 503 FTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAF 562
Query: 140 SVFNEVKFNCEDIGP--EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
V ++ E I P E+ NSL++ L + + EM RG+ + + +G I
Sbjct: 563 KVKGAMER--EXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALID 620
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
+C+ L + S E+ EN + +I ++ G + R++EA ++ ++
Sbjct: 621 GWCKEGMLDKAFSSYFEMT--ENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 678
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
PD + + + + + L + K + P Y I GL ++ +A+
Sbjct: 679 FPDHECFLKSDIRYAAIQKIADS---LDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARR 735
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
FF+ + KG VP T L
Sbjct: 736 ----------------------------------FFSMLSLKGFVPDNFTYCTLIHGYSA 761
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
DE + + ++ +YN +++ LC S + A + ++ +KGL P+V
Sbjct: 762 AGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVT 821
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
YN+L++ C+ + A KL D+M G S ++ TY+ LI+ + G+IE +++L + M+
Sbjct: 822 YNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMI 881
Query: 498 EKGVAPDATTYTSLLEGLCQETN 520
+ GV Y +L++G + +N
Sbjct: 882 KAGVDSKLIEYCTLVQGGFKTSN 904
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 122/250 (48%), Gaps = 8/250 (3%)
Query: 312 ICEAKELGEVI------VSGKFTIDDDVLNALIG-SVSSIDPRSAIVFFNFMIEKGRVPT 364
+C+ K+ G VI V +F V + ++ V ++A+ F+ M + GR+P+
Sbjct: 131 LCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPS 190
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
L + ++L NL K ++ VY+ + D+ ++MV+ C G++ EA G ++
Sbjct: 191 LRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVK 250
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
+M+ G++P++ Y+SL+ + AK + M G S N+ TY +LI + +
Sbjct: 251 KMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQC 310
Query: 485 EIEGALRLFHNMLEKG-VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
+++ A ++ M E+ + PD Y L++G C+ + A + ++ + + I
Sbjct: 311 KMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFIC 370
Query: 544 STFMISLCRR 553
++ + C+R
Sbjct: 371 NSLINGYCKR 380
>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/492 (22%), Positives = 214/492 (43%), Gaps = 10/492 (2%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL FF WA + + H Y +L+ LS ++ +L+ + +I L + F++
Sbjct: 229 ALRFFYWADRLWRYRHDSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVM 288
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVE 186
S + + A V ++ + ICN+ + +L + AL+ + M G+
Sbjct: 289 VSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIA 348
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
+ + + I +C ++ Q + ++D++ + S S V+ + C+ KR+ E
Sbjct: 349 PNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGL--LCRDKRLNEIR 406
Query: 247 KVLDELRI-RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
+++ +++ + PD + Y + + G E +L++ KL +Y +
Sbjct: 407 ELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHA 466
Query: 306 LIVERRICEAKEL-GEVIVSGKFTIDDDVL---NALIGSVSSIDPRSAIVFFNFMIEKGR 361
E +I +AKEL E+ G D DV+ + L G A M +
Sbjct: 467 YCKEGKIQKAKELVSEMFSKG---CDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHC 523
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P T + LC+ KS E ++ + + + +Y+V+V L G+L EA
Sbjct: 524 KPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACD 583
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
V++EM KG P+ N L+ + CR+ R A +L + GC+ N+ + +I F
Sbjct: 584 VVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFC 643
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
+ ++E AL L +M PD TYT+L++ L + ++ A E+ K + ++ +
Sbjct: 644 QKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPV 703
Query: 542 ILSTFMISLCRR 553
+ + CR+
Sbjct: 704 TYRSVIHQYCRK 715
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/504 (19%), Positives = 201/504 (39%), Gaps = 56/504 (11%)
Query: 56 INPYLLTHHSLALGFFN---------WASQQPNFTHSP--LSYHSILKSLSLSRQINAID 104
I P ++T++ L G+ N Q P+ SP +SY++++ L +++N I
Sbjct: 347 IAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIR 406
Query: 105 SVLKQVKVN-KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAV 163
++K+++ + K+ D Y NSL+ +
Sbjct: 407 ELIKKMQTDSKLLPDHVTY-----------------------------------NSLIQM 431
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L+ G+ D AL++ E + + + + +C+ K+ + ++ E+ +
Sbjct: 432 LSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSK--GCD 489
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
V ++ GFC+ ++++A K++ ++ CKP+ + Y G E +
Sbjct: 490 PDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKM 549
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS- 342
+ + P Y + GL E ++ EA ++ ++ F + +N L+ S+
Sbjct: 550 MNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCR 609
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
PR A + KG + + + C+++ + + + + + D +
Sbjct: 610 DGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVT 669
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y ++ L + R+ EA + +M R+GL P Y S++ CR+ R L
Sbjct: 670 YTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKG--RVEDLLKLLKK 727
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
S YN++I K + G +E A L +L DA T L+E
Sbjct: 728 MLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVGIPM 787
Query: 523 AAFEV----FNKSVNHDVMLARSI 542
+A++V FN+++ D+ L +
Sbjct: 788 SAYKVACRMFNRNLIPDLKLCEKV 811
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 211/470 (44%), Gaps = 17/470 (3%)
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
F+ + +F +++S++++ + S N+++ VL ++++ + + +
Sbjct: 59 FSSPPKMGSFKVGDSTFYSLIENYAYSSDFNSLEKVLNRMRLENRVFSEKSFFVMFKAYG 118
Query: 131 QGKNTQKAFSVFNEVKFN--CEDIGPEICNSLLAVLASDGYIDNALKMFDEM---SHRGV 185
+ KA +F + F C+ NS+L V+ G+ D AL+ ++ + +
Sbjct: 119 KAHLPNKAIELFYRMSFEFYCKPTVKSF-NSVLNVIIQAGFHDRALEFYNHVVGAKDMNI 177
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
+ + F + I C+ + + + E+ R+ + + ++ G CK R++EA
Sbjct: 178 LPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRK--CVPDAYTYCTLMDGLCKVDRIDEA 235
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL-GVAPRTNDYREFIL 304
+LDE++I C P + ++ G F R L L G P Y I
Sbjct: 236 VSLLDEMQIEGCFPSPATFNVLINGLCKKGD-FTRVTKLVDNMFLKGCVPNEVTYNTLIH 294
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDD----DVLNALIGSVSSIDPRSAIVFFNFMIEKG 360
GL ++ ++ +A L + +VS K ++ ++N L+ ++D +V M E+G
Sbjct: 295 GLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVL---MEERG 351
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
+ S L L K KS+E + ++K + Y+ +V LC + EA
Sbjct: 352 YIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAM 411
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
++ EM KG P+ ++SLM+ A ++W M C+ N Y++LI
Sbjct: 412 KILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGL 471
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ G++ A+ ++ ML G PD Y+S+++GLC +++ A +++N+
Sbjct: 472 CKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNE 521
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 172/398 (43%), Gaps = 7/398 (1%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKF-NCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
+ II S+ + A +F E+ C C +L+ L ID A+ + DEM
Sbjct: 184 FNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYC-TLMDGLCKVDRIDEAVSLLDEM 242
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
G S F V I C+ +V ++D + + + V +IHG C
Sbjct: 243 QIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLK--GCVPNEVTYNTLIHGLCLKG 300
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
++++A +LD + +C P+ + Y + G + VL + G Y
Sbjct: 301 KLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYS 360
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK 359
+ GL E + EA L + + ++ + +AL+ G P A+ + M +K
Sbjct: 361 VLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDK 420
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P T S+L K + S + +EV+K ++ + + Y+V++ LC G++ EA
Sbjct: 421 GCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEA 480
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA--SGCSGNLKTYNILI 477
V +M G PDV Y+S+++ C + A KL+++M ++ TYNIL
Sbjct: 481 MMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILF 540
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ + I A+ L ++ML++G PD T L L
Sbjct: 541 NALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRML 578
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 201/490 (41%), Gaps = 30/490 (6%)
Query: 64 HSLALGFFNW--ASQQPNFTHSPLSYHSILKSL-SLSRQINAIDSVLKQVKVNKITLDSS 120
H AL F+N ++ N + LS++ I+KS+ L NAI+ + +++ V K D+
Sbjct: 159 HDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIE-LFREMPVRKCVPDAY 217
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
Y ++ L + +A S+ +E++ P N L+ L G K+ D M
Sbjct: 218 TYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNM 277
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
+G + + + I C KL + LS+LD R + + V II+G K
Sbjct: 278 FLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLD--RMVSSKCVPNEVTYGTIINGLVKQG 335
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
R + +VL + R + Y ++ G E + K+ G T Y
Sbjct: 336 RALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYS 395
Query: 301 EFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
+ GL +R+ EA K L E+ G + + G + AI + M +
Sbjct: 396 ALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKI 455
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
S L LCK K E + V+ + A D+ +Y+ M+ LC +G + EA
Sbjct: 456 NCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEA 515
Query: 420 YGVIQEMKRKGLD--PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+ EM D PDV YN L A C++ + A L + M GC +L T NI +
Sbjct: 516 LKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFL 575
Query: 478 SKFSE-----------VGEIE----------GALRLFHNMLEKGVAPDATTYTSLLEGLC 516
E + E+ GA ++ ML+K ++P A+T+ ++ LC
Sbjct: 576 RMLREKLDPPQDGAKFLDELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELC 635
Query: 517 QETNLQAAFE 526
Q +QA +
Sbjct: 636 QPKKIQAVID 645
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 4/192 (2%)
Query: 346 PRSAI-VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK-VLSANDY--FTDME 401
P AI +F+ E PT+ + +++ + + D +E Y V+ A D ++
Sbjct: 123 PNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVL 182
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
S+N+++ +C G + A + +EM + PD Y +LM+ C+ D + A L D+M
Sbjct: 183 SFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEM 242
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
GC + T+N+LI+ + G+ +L NM KG P+ TY +L+ GLC + L
Sbjct: 243 QIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 302
Query: 522 QAAFEVFNKSVN 533
A + ++ V+
Sbjct: 303 DKALSLLDRMVS 314
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%)
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
+AI F M + VP T L LCK ++ DE V + + F ++NV++
Sbjct: 199 NAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLI 258
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+ LC G ++ M KG P+ YN+L+ C + L A L D+M +S C
Sbjct: 259 NGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCV 318
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N TY +I+ + G R+ M E+G + Y+ L+ GL +E + A +
Sbjct: 319 PNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRL 378
Query: 528 FNKSVNHDVMLARSILSTFMISLCR 552
F +S++ L + S + LCR
Sbjct: 379 FKESMDKGCKLNTVLYSALVDGLCR 403
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 45/85 (52%)
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ ++N++I ++G ++ A+ LF M + PDA TY +L++GLC+ + A +
Sbjct: 180 NVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLL 239
Query: 529 NKSVNHDVMLARSILSTFMISLCRR 553
++ + + + + LC++
Sbjct: 240 DEMQIEGCFPSPATFNVLINGLCKK 264
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 121/515 (23%), Positives = 219/515 (42%), Gaps = 64/515 (12%)
Query: 31 TPLLEQTLHQLGLRDS--LSPSLVARVINPYLLTHHSLALGFF--NWASQ---------- 76
+ LL H + D+ L +V P T +L G F N AS+
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 77 ---QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
QP+ ++Y +++ L I+ S+LK+++ KI D +Y II L + K
Sbjct: 217 RGCQPDL----VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK 272
Query: 134 NTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+ A ++F E+ + + I P++ +SL++ L + G +A ++ +M R + + +
Sbjct: 273 HMDDALNLFTEM--DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-IIHGFCKGKRVEEAFKVLD 250
F I F + KL + + DE+ KR I+ + +I+GFC R++EA + +
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRS---IDPDIFTYSSLINGFCMHDRLDEAKHMFE 387
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
+ ++C P+ + Y + + F V E + ++ + G+ T Y I G R
Sbjct: 388 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
D +A + F M+ G P + T +
Sbjct: 448 ----------------------------------DCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LCK K + + V++ L + D+ +YN+M+ +C +G++ + + + + KG
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+ P+V YN+++ CR+ A L +M G N TYN LI G+ E +
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 593
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
L M G A DA+T L+ + + L +F
Sbjct: 594 ELIKEMRSCGFAGDAST-IGLVTNMLHDGRLDKSF 627
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 181/401 (45%), Gaps = 13/401 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ +A + + + ++M G+ + +FI FC ++L L++L ++ K
Sbjct: 87 NKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK 146
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E ++ S + ++G+C KR+ +A ++D++ KPD + + L
Sbjct: 147 LGYEPDIVTLSSL----LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E ++ + + G P Y + GL I A L + + GK D + N
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 336 ALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I + A+ F M KG P + T S+L LC + + + +
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ +++ ++ G+L EA + EM ++ +DPD+ Y+SL+ C D L A
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K +++ M + C N+ TY+ LI F + +E + LF M ++G+ + TYT+L+ G
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 515 LCQETNLQAAFEVFNKSVN---HDVMLARSILSTFMISLCR 552
Q + A VF + V+ H +L +IL + LC+
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNIL---LDGLCK 480
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 166/362 (45%), Gaps = 9/362 (2%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-L 231
A+ + D+M RG + + +G + C+ + LS+L +K E I V+
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL---KKMEKGKIEADVVIYNT 263
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
II G CK K +++A + E+ + +PD Y + G + +L +
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSSIDP-RS 348
+ P + I + E ++ EA++L + ++ K +ID D+ ++LI D
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A F MI K P + T S L K CK + +E +E+++ +S + +Y ++
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
+ A V ++M G+ P++ YN L++ C+ L A +++ + S
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TYNI+I + G++E LF N+ KGV+P+ Y +++ G C++ + + A +
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 529 NK 530
K
Sbjct: 562 KK 563
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 93/204 (45%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F M++ P++ + L + K NK + ++ + + + D+ +Y++ ++
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C +L A V+ +M + G +PD+ +SL+ C + A L DQM G
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ T+ LI + A+ L M+++G PD TY +++ GLC+ ++ A +
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
K + I +T + LC+
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCK 270
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 84/215 (39%), Gaps = 21/215 (9%)
Query: 360 GRVPTLSTLSNLSKNLCKRNK------------SDELVEVYKVLSANDYFTDME------ 401
G PT+ + NL + C + L ++ KV A D F DM
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFP 81
Query: 402 ---SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+N ++S + + + ++M+ G+ D+ Y+ + CR L A +
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M G ++ T + L++ + I A+ L M+E G PD T+T+L+ GL
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
A + ++ V T + LC+R
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 115/487 (23%), Positives = 200/487 (41%), Gaps = 53/487 (10%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQ-VKVNKITLDSSVYRFI 125
+LGFF + S+Q NF + SY ++ LS R + + L Q V + K +V I
Sbjct: 51 SLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNV---I 107
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
L+ V+ E F+ P + + +L V G NAL +FD M G
Sbjct: 108 WDELV---------GVYREFAFS-----PTVFDMILKVYVEKGLTKNALYVFDNMGKCGR 153
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
S + +N + + ++ + ++ + ++++ FCK +V+EA
Sbjct: 154 IPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRV--GIVPDVFMVSIMVNAFCKDGKVDEA 211
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
+ ++ +P+ + Y + + +G V + VLK + GV+ Y I G
Sbjct: 212 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 271
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTL 365
+ ++ EA++ V E VP
Sbjct: 272 YCKQCKMDEAEK---------------------------------VLRGMQEEAALVPDE 298
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
L C+ K D+ V + + T++ N +++ C G + EA GVI
Sbjct: 299 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 358
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M L PD YN+L++ CRE A L D+M G + TYN L+ VG
Sbjct: 359 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 418
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
+ AL+++H M+++GVAPD Y++LL+GL + N + A ++ + +R +T
Sbjct: 419 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 478
Query: 546 FMISLCR 552
+ LC+
Sbjct: 479 MISGLCK 485
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 206/485 (42%), Gaps = 41/485 (8%)
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
+S++ +I+ + V+ ++ + DS Y ++ + +T +AF++ + K
Sbjct: 337 NSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCD--KM 394
Query: 148 NCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
E I P + N+LL L G D+AL+++ M RGV +G+ + +
Sbjct: 395 LQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENF 454
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
++ ++ R + +I G CK ++ EA ++ D+++ C PD I YR
Sbjct: 455 EGASTLWKDILAR--GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 512
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVS 324
+ + + +V + V + ++P Y I GL RR+ E +L E+ +
Sbjct: 513 TLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIR 572
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
G T + ALI G A + M E G + S + L + + DE
Sbjct: 573 G-LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDE 631
Query: 384 LVEVYKVLSANDYFTDMES--------------------------------YNVMVSFLC 411
+ + + + +F D E YN+ ++ LC
Sbjct: 632 ANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLC 691
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+G++ +A + KG PD Y +L+ + A +L D+M G N+
Sbjct: 692 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIV 751
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
TYN LI+ + ++ A RLFH + +KG+ P+ TY +L++G C+ N+ AAF++ +K
Sbjct: 752 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 811
Query: 532 VNHDV 536
+ +
Sbjct: 812 IEEGI 816
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 122/250 (48%), Gaps = 8/250 (3%)
Query: 312 ICEAKELGEVI------VSGKFTIDDDVLNALIG-SVSSIDPRSAIVFFNFMIEKGRVPT 364
+C+ K+ G VI V +F V + ++ V ++A+ F+ M + GR+P+
Sbjct: 97 LCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPS 156
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
L + ++L NL K ++ VY+ + D+ ++MV+ C G++ EA G ++
Sbjct: 157 LRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVK 216
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
+M+ G++P++ Y+SL+ + AK + M G S N+ TY +LI + +
Sbjct: 217 KMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQC 276
Query: 485 EIEGALRLFHNMLEKG-VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
+++ A ++ M E+ + PD Y L++G C+ + A + ++ + + I
Sbjct: 277 KMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFIC 336
Query: 544 STFMISLCRR 553
++ + C+R
Sbjct: 337 NSLINGYCKR 346
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/394 (20%), Positives = 159/394 (40%), Gaps = 43/394 (10%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
FT S +++++++ L ++ + + ++K + D YR +I + N +AF
Sbjct: 469 FTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAF 528
Query: 140 SVFNEVKFNCEDIGP--EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
V ++ E I P E+ NSL++ L + + EM RG+ + + +G I
Sbjct: 529 KVKGAMER--EPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALID 586
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
+C+ L + S E+ EN + +I ++ G + R++EA ++ ++
Sbjct: 587 GWCKEGMLDKAFSSYFEMT--ENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 644
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
PD + + + + + L + K + P Y I GL ++ +A+
Sbjct: 645 FPDHECFLKSDIRYAAIQKIADS---LDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARR 701
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
FF+ + KG VP T L
Sbjct: 702 ----------------------------------FFSMLSLKGFVPDNFTYCTLIHGYSA 727
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
DE + + ++ +YN +++ LC S + A + ++ +KGL P+V
Sbjct: 728 AGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVT 787
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
YN+L++ C+ + A KL D+M G S +++
Sbjct: 788 YNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSIQ 821
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 165/362 (45%), Gaps = 9/362 (2%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-L 231
A+ + D M RG + + + +GV + C+ L++L+ K E + I V+
Sbjct: 171 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLN---KMEAAKIEADVVIFNT 227
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
II CK + V++A + E+ + +P+ + Y + G + +L +
Sbjct: 228 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 287
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSSIDP-RS 348
+ P + I + E + EA++L + ++ K +ID D+ N+L+ D
Sbjct: 288 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMI--KRSIDPDIFTYNSLVNGFCMHDRLDK 345
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A F FM+ K P + T + L K CK + ++ E+++ +S D +Y ++
Sbjct: 346 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 405
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L G A V ++M G+ PD+ Y+ L++ C L A +++D M S
Sbjct: 406 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 465
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ Y +I + G+++ LF ++ KGV P+ TY +++ GLC + LQ A+ +
Sbjct: 466 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 525
Query: 529 NK 530
K
Sbjct: 526 KK 527
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 185/433 (42%), Gaps = 42/433 (9%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ +A D + + ++M + + + I FC +++ L++L ++ K
Sbjct: 51 NKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMK 110
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E S++ S + ++G+C GKR+ +A ++D++ +PD I + + L
Sbjct: 111 LGYEPSIVTLSSL----LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 166
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E ++ + + G P Y + GL A L + + K D + N
Sbjct: 167 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 226
Query: 336 ALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I S+ A+ F M KG P + T S+L LC + + ++ +
Sbjct: 227 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 286
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ ++N ++ G+ EA + +M ++ +DPD+ YNSL+ C D L A
Sbjct: 287 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 346
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEV------------------------------- 483
K++++ M + C ++ TYN LI F +
Sbjct: 347 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 406
Query: 484 ----GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
G+ + A ++F M+ GV PD TY+ LL+GLC L+ A EVF+ ++ L
Sbjct: 407 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 466
Query: 540 RSILSTFMISLCR 552
I +T + +C+
Sbjct: 467 IYIYTTMIEGMCK 479
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 113/517 (21%), Positives = 217/517 (41%), Gaps = 68/517 (13%)
Query: 31 TPLLEQTLHQLGLRDSLSPSLVARVIN----PYLLTHHSLALGFF--NWASQ-------- 76
+ LL H G R S + +LV +++ P +T +L G F N AS+
Sbjct: 121 SSLLNGYCH--GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 178
Query: 77 -----QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQ 131
QPN ++Y ++ L + ++L +++ KI D ++ II SL +
Sbjct: 179 VQRGCQPNL----VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 234
Query: 132 GKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
++ A ++F E++ + I P + +SL++ L S G +A ++ +M + + +
Sbjct: 235 YRHVDDALNLFKEME--TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 292
Query: 190 IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKV 248
+ F I F + K + + D++ KR I+ + +++GFC R+++A ++
Sbjct: 293 VTFNALIDAFVKEGKFVEAEKLYDDMIKRS---IDPDIFTYNSLVNGFCMHDRLDKAKQM 349
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
+ + ++C PD + Y + + F V + + ++ G+ T Y I GL
Sbjct: 350 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 409
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTL 368
+ D +A F M+ G P + T
Sbjct: 410 DG----------------------------------DCDNAQKVFKQMVSDGVPPDIMTY 435
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
S L LC K ++ +EV+ + ++ D+ Y M+ +C +G++ + + + +
Sbjct: 436 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 495
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
KG+ P+V YN+++ C + LL+ A L +M G N TYN LI G+
Sbjct: 496 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAA 555
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+ L M DA+T L+ + + L +F
Sbjct: 556 SAELIREMRSCRFVGDAST-IGLVANMLHDGRLDKSF 591
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 200/470 (42%), Gaps = 16/470 (3%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
SLAL + + S ++ S+L ++I+ +++ Q+ D+ +
Sbjct: 99 SLALALLG-KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 157
Query: 125 IIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMS 181
+I L +A ++ + V+ C+ P + + V L G D AL + ++M
Sbjct: 158 LIHGLFLHNKASEAVALVDRMVQRGCQ---PNLVTYGVVVNGLCKRGDTDLALNLLNKME 214
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCK 238
+E + F I C+ + L++ E+ R N + S+I+ L +G
Sbjct: 215 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG--- 271
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
R +A ++L ++ ++ P+ + + + + F G E E + K + P
Sbjct: 272 --RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 329
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMI 357
Y + G + R+ +AK++ E +VS D N LI G S F M
Sbjct: 330 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 389
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+G V T + L + L D +V+K + ++ D+ +Y++++ LC +G+L
Sbjct: 390 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 449
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+A V M++ + D+ Y +++E C+ + L+ + G N+ TYN +I
Sbjct: 450 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 509
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
S ++ A L M E G P++ TY +L+ ++ + A+ E+
Sbjct: 510 SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAEL 559
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 93/204 (45%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F M++ +P++ + L + K K D ++ + + + + + +YN++++
Sbjct: 31 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 90
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C ++ A ++ +M + G +P + +SL+ C + A L DQM G
Sbjct: 91 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 150
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ T+ LI + A+ L M+++G P+ TY ++ GLC+ + A +
Sbjct: 151 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 210
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
NK + I +T + SLC+
Sbjct: 211 NKMEAAKIEADVVIFNTIIDSLCK 234
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 16/170 (9%)
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+VE K+LSA M+ ++V++S RL +G+ YN L+
Sbjct: 47 IVEFNKLLSA---IAKMKKFDVVISLGEKMQRLEIVHGLYT-------------YNILIN 90
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
CR + A L +M G ++ T + L++ + I A+ L M+E G P
Sbjct: 91 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 150
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
D T+T+L+ GL A + ++ V + LC+R
Sbjct: 151 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 200
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%)
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+L +A G+ M + P + +N L+ A + L ++M L TYN
Sbjct: 27 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
ILI+ F +I AL L M++ G P T +SLL G C + A + ++ V
Sbjct: 87 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 144
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 164/380 (43%), Gaps = 36/380 (9%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L G+ AL + +M G + + + + + FC ++ + ++D +R
Sbjct: 161 NILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMR- 219
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E + V +++G CK R+E+A KV DE+ PD ++Y + + +G
Sbjct: 220 -EGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCS 278
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E V + + G+ P + I +C+A L
Sbjct: 279 HEALSVFAEMTRKGIMPDVVTFTSLI------HVMCKAGNL------------------- 313
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
A+ M E+G T + L CK+ D+ + + +
Sbjct: 314 ---------ERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQ 364
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
+ YN +++ C GR+ EA +++EM+ KG+ PDV Y++++ A C+ A +L
Sbjct: 365 PSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQL 424
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
QM +G + TY+ LI E + A LF NM+ G+ PD TYTSL++G C+
Sbjct: 425 NQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCK 484
Query: 518 ETNLQAAFEVFNKSVNHDVM 537
E N++ A + ++ V V+
Sbjct: 485 EGNVERALSLHDEMVKAGVL 504
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 202/475 (42%), Gaps = 61/475 (12%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PN ++++S++ + + ++ V ++ + D Y ++ + +
Sbjct: 224 KPNL----VTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSH 279
Query: 137 KAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+A SVF E+ + I P++ SL+ V+ G ++ A+ + EM RG++ + I F
Sbjct: 280 EALSVFAEMTR--KGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTA 337
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELR 253
I FC+ L L + E+R+ I SV+ +I+G+C R++EA +++ E+
Sbjct: 338 LIDGFCKKGFLDDALLAVREMRQ---CRIQPSVVCYNALINGYCMVGRMDEARELVREME 394
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+ KPD + Y + + G + ++ + GV P Y I R +C
Sbjct: 395 AKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLI------RVLC 448
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
E K LG+ A V F MI G P T ++L
Sbjct: 449 EEKRLGD----------------------------AHVLFKNMISLGLQPDEVTYTSLID 480
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
CK + + ++ + D+ +Y+V+++ L S R +EA ++ ++ + P
Sbjct: 481 GHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVP 540
Query: 434 DVSFYNSLMEAC---------------CREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
Y++LM C C + L+ A K++ + + + Y++LI
Sbjct: 541 ANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIH 600
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
G + AL ML+ G AP++T+ SL+ GL ++ + A +V + +N
Sbjct: 601 GHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLN 655
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%)
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
NA++ ++S SA FF+ M+ G P + T + L + LC R E + V + +
Sbjct: 127 NAVLLALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGA 186
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ +YN +V+ C +G + A ++ M+ GL P++ +NS++ C+ + A
Sbjct: 187 GCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDA 246
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+K++D+M G + + +YN L+ + +VG AL +F M KG+ PD T+TSL+
Sbjct: 247 RKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHV 306
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+C+ NL+ A + + + + + + C++
Sbjct: 307 MCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKK 345
>gi|224084127|ref|XP_002307219.1| predicted protein [Populus trichocarpa]
gi|222856668|gb|EEE94215.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 126/543 (23%), Positives = 230/543 (42%), Gaps = 80/543 (14%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQV-KVNKITLDSSVYRFI 125
AL F WAS+ PNFTHS +Y +++ L R+ + + +L ++ K + D S++ I
Sbjct: 31 ALQTFEWASKLPNFTHSQSTYRALIHKLLTFRRFHTVQHLLDEMPKSIGLPPDESIFLTI 90
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMF-DEMSHRG 184
I L + + + V + V ++ +I NS+L VL + ID A K + +M G
Sbjct: 91 IRGLGRARMIRDVIKVLDLVTRYGKNPSLKIFNSILDVLVKED-IDLARKFYRKKMMGAG 149
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
++ +G+ + C ++G+ +L ++ R + VI ++H C +V
Sbjct: 150 IQGDDYTYGILMKGLCLTNRIGEGFKLLQVIKSR--GLKPNVVIYNTLLHALCNNGKVGR 207
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A +++E++ +P+ + + ++ + + + V+L+K LG P + +
Sbjct: 208 ARSLMNEIK----EPNDVTFNVLICGYCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVE 263
Query: 305 GLIVERRICEAKELGEVIVSGKFTID---------------------------------- 330
L R+ EA E+ E + S +D
Sbjct: 264 ILCNVGRVTEAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLP 323
Query: 331 -DDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD------ 382
D NALI G S SA+ FN M G T L K L R +++
Sbjct: 324 NADTYNALISGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKIL 383
Query: 383 ELVE----------------VYKVLSAN------DYFTDMESY-------NVMVSFLCTS 413
EL+E +Y + N ++ ME+ ++ + C
Sbjct: 384 ELMEETRGVCGGSISPYNSVLYGLYRKNMLNEALEFLMKMENLFPRAVDRSLRILGFCEE 443
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G ++EA V +M +G P Y+ L+ C+E +R A +L ++M G T+
Sbjct: 444 GAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFLGYFPVASTF 503
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
N LIS F +G+ AL+L +M+ +G PD +Y+ L++ LC++ + Q A + + V
Sbjct: 504 NALISGFCRLGKDGSALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASLLLQMVE 563
Query: 534 HDV 536
+ +
Sbjct: 564 NGI 566
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 196/453 (43%), Gaps = 7/453 (1%)
Query: 82 HSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
H+P + ++ IL S + + + S+ ++++ I D +I F
Sbjct: 55 HTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
SV ++ +L+ L G ++ AL D++ +G++F + +G I
Sbjct: 115 SVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGV 174
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSV-IAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C K+G + VRK + + +V + II CK + V EA+ + E+ +
Sbjct: 175 C---KIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGIS 231
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
D + Y + F + + E +L + + P Y + L E ++ EAK +
Sbjct: 232 ADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNV 291
Query: 319 GEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
V++ D + L+ G + + A FN M G P + + + L CK
Sbjct: 292 LAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCK 351
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
DE + ++K + + + +Y+ ++ LC SGR+ + +I EM+ +G+ +V
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVIT 411
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
YNSL++ C+ L A L+++M G T+ IL+ + G ++ A F ++L
Sbjct: 412 YNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLL 471
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
KG D Y ++ G C++ L+ A + +K
Sbjct: 472 TKGYHLDVYKYNVMINGHCKQGLLEEALTMLSK 504
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/483 (22%), Positives = 209/483 (43%), Gaps = 51/483 (10%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFT---------HSP--LSYHSILKSL 94
SLS L + I P L+T + L F + F+ + P +++ +++K L
Sbjct: 80 SLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGL 139
Query: 95 SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGP 154
L Q+N ++ I D Y +I + + +T+ A + ++
Sbjct: 140 CLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNV 199
Query: 155 EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
E+ N+++ L + A +F EM+ +G+ + + I+ FC +KL + + +L+E
Sbjct: 200 EMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNE 259
Query: 215 VRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIREC-KPDFIAYRIVAEEFK 272
+ + IN +V +++ CK +V+EA VL + ++ C KPD I Y + + +
Sbjct: 260 MVLKT---INPNVYTYNILVDALCKEGKVKEAKNVL-AVMLKACVKPDVITYSTLMDGYF 315
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
L+ + + + V +GV P + Y I G C+ K + E
Sbjct: 316 LVYELKKAQHVFNAMSLMGVTPDVHSYTILINGF------CKNKMVDE------------ 357
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
A+ F M +K VP + T S+L LCK + + ++ +
Sbjct: 358 ----------------ALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMR 401
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
++ +YN ++ LC +G L A + +MK +G+ P + L++ C+ L+
Sbjct: 402 DRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLK 461
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A++ + + G ++ YN++I+ + G +E AL + M E G P+A T+ ++
Sbjct: 462 DAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIII 521
Query: 513 EGL 515
L
Sbjct: 522 NAL 524
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 148/322 (45%), Gaps = 1/322 (0%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I+ F K K A + L ++ +PD I I+ F MG + VL K K G
Sbjct: 65 ILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG 124
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAI 350
P T + I GL ++ ++ +A + +++ D LI V I D R AI
Sbjct: 125 YQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAI 184
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ + P + + + LCK E ++ ++A D+ +Y ++
Sbjct: 185 KLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGF 244
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C + +L+EA G++ EM K ++P+V YN L++A C+E ++ AK + M + ++
Sbjct: 245 CIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDV 304
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TY+ L+ + V E++ A +F+ M GV PD +YT L+ G C+ + A +F +
Sbjct: 305 ITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKE 364
Query: 531 SVNHDVMLARSILSTFMISLCR 552
+++ S+ + LC+
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCK 386
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 195/463 (42%), Gaps = 56/463 (12%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNK--------ITLDSSVYRFIIPSLIQ 131
F+ + +SY ++ L + ++N ++L+ ++ K + + +Y +I L +
Sbjct: 138 FSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCR 197
Query: 132 GKNTQKAFSVFNEVKFNCEDIGPEIC------NSLLAVLASDGYIDNALKMFDEMSHRGV 185
+ F +NE+ +G +C SL+ L G + DEM RG+
Sbjct: 198 NGFVDEGFEFYNEM------MGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGL 251
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
+ S F V I C+N L + M DE+ R V ++ G+C V+ A
Sbjct: 252 DVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYE--PNIVTCTALMGGYCLKGNVDMA 309
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
++ D + K D Y + + +G V + V + + GV P Y I
Sbjct: 310 RELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDC 369
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTL 365
L C+A E VSG + I M G P +
Sbjct: 370 L------CKAGE-----VSGAWEI-----------------------VKTMHRSGLTPDI 395
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
T L LCK + D+ + ++ L + D+ SY +++ CTS R+ EA ++++
Sbjct: 396 VTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRD 455
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M K L P + Y+ L++ CR + A +L ++M G + TY+IL+ +
Sbjct: 456 MHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQH 515
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ A+ LF+ M+++G+ PD YT +++G C+ + A +F
Sbjct: 516 LDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLF 558
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 184/437 (42%), Gaps = 42/437 (9%)
Query: 138 AFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
+FS+F ++ + N++L L +G + AL+ DE+ + G + + +G+ I
Sbjct: 91 SFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILIN 150
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMING------SVIAVLIIHGFCKGKRVEEAFKVLDE 251
CEN ++ + +++L + K + +G V+ ++I C+ V+E F+ +E
Sbjct: 151 GLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNE 210
Query: 252 LRIRECKPDFIAYRIVA----------EEFKLMGSVFEREV------------------V 283
+ P+ Y + E F L+ + R + +
Sbjct: 211 MMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGM 270
Query: 284 LKKKRKL-------GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
L + R++ G P + G ++ + A+EL + I F D N
Sbjct: 271 LVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNV 330
Query: 337 LIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
I + R A+ F+ M +G VP + T ++L LCK + E+ K + +
Sbjct: 331 FIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSG 390
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D+ + +++ LC S RL +A + ++ GL PDV Y L+ CC + A
Sbjct: 391 LTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAM 450
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L M ++ TY+ LI G I A RL + M KG PD TY+ LL+ L
Sbjct: 451 NLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDAL 510
Query: 516 CQETNLQAAFEVFNKSV 532
++ +L A +FN+ +
Sbjct: 511 WKKQHLDEAVFLFNQMI 527
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/204 (18%), Positives = 86/204 (42%), Gaps = 27/204 (13%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F ++++G L+ + K LC + +E + + N + + SY ++++ LC
Sbjct: 95 FGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCE 154
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
+GR+ EA +++ ++++ F+ GN+
Sbjct: 155 NGRVNEAVNLLRMIEKEKEKEKDGFF---------------------------VKGNVVM 187
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
Y+I+I G ++ ++ M+ GV P+ TY SL+ GLC F + ++ +
Sbjct: 188 YSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMI 247
Query: 533 NHDVMLARSILSTFMISLCRRVLI 556
+ ++ + + + LC+ ++
Sbjct: 248 RRGLDVSVYVFTVLIDGLCKNGML 271
>gi|356512321|ref|XP_003524868.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Glycine max]
Length = 733
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 120/524 (22%), Positives = 238/524 (45%), Gaps = 32/524 (6%)
Query: 28 RKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSY 87
R WT L+ ++ L PSLV V++ H AL F+ W + FTH+P +
Sbjct: 67 RAWTTRLQNSIRSL--VPEFDPSLVYNVLHGAASPEH--ALQFYRWVERAGLFTHTPETT 122
Query: 88 HSILKSLSLSRQINAIDSVL---KQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
I++ L ++N +L + V++ + + +I S + Q++ +F +
Sbjct: 123 LKIVQILGRYSKLNHARCILFNDTRGGVSRAAVTEDAFVSLIDSYGRAGIVQESVKLFKK 182
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+K D + ++L V+ G A + ++ M GV+ + F + +W + +
Sbjct: 183 MKELGLDRTVKSYDALFKVILRRGRYMMAKRYYNAMLLEGVDPTRHTFNILLWGMFLSLR 242
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + ++++ R ++ V +I+G+ + K+V+EA K+ E++ R+ P+ I++
Sbjct: 243 LDTAVRFYEDMKSR--GILPDVVTYNTLINGYFRFKKVDEAEKLFVEMKGRDIVPNVISF 300
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE-LGEVIV 323
+ + + G + + V ++ + GV P + + GL ++ EA++ LGE++
Sbjct: 301 TTMLKGYVAAGRIDDALKVFEEMKGCGVKPNVVTFSTLLPGLCDAEKMAEARDVLGEMVE 360
Query: 324 SGKFTIDDDVLNALI------GSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
D+ + ++ G + ++ D A+V + E G L ++ C
Sbjct: 361 RYIAPKDNALFMKMMSCQCKAGDLDAAADVLKAMVRLSIPTEAGHYGV------LIESFC 414
Query: 377 KRNKS-------DELVEVYKVL-SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
K N D+L+E VL ND + +YN+M+ +LC GR +A +++ +
Sbjct: 415 KANVYDKAEKLLDKLIEKEIVLRPQNDSEMEPSAYNLMIGYLCEHGRTGKAETFFRQLLK 474
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
KG+ V+F N+L+ +E A ++ M G + ++ +Y +LI + GE
Sbjct: 475 KGVQDSVAF-NNLIRGHSKEGNPDSAFEIMKIMGRRGVARDVDSYRLLIESYLRKGEPAD 533
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
A MLE G P+++ Y S++E L + +Q A V V
Sbjct: 534 AKTALDGMLESGHLPESSLYRSVMESLFDDGRVQTASRVMKSMV 577
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 76/169 (44%)
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E V+++K + ++SY+ + + GR A M +G+DP +N L+
Sbjct: 175 ESVKLFKKMKELGLDRTVKSYDALFKVILRRGRYMMAKRYYNAMLLEGVDPTRHTFNILL 234
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
L A + ++ M + G ++ TYN LI+ + +++ A +LF M + +
Sbjct: 235 WGMFLSLRLDTAVRFYEDMKSRGILPDVVTYNTLINGYFRFKKVDEAEKLFVEMKGRDIV 294
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
P+ ++T++L+G + A +VF + V ST + LC
Sbjct: 295 PNVISFTTMLKGYVAAGRIDDALKVFEEMKGCGVKPNVVTFSTLLPGLC 343
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 79/452 (17%), Positives = 181/452 (40%), Gaps = 62/452 (13%)
Query: 53 ARVINPYLLTHHSLALGFFNWAS-----------QQPNFTHSPLSYHSILKSLSLSRQIN 101
+R I P ++T+++L G+F + + + + +S+ ++LK + +I+
Sbjct: 255 SRGILPDVVTYNTLINGYFRFKKVDEAEKLFVEMKGRDIVPNVISFTTMLKGYVAAGRID 314
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV---------------K 146
V +++K + + + ++P L + +A V E+
Sbjct: 315 DALKVFEEMKGCGVKPNVVTFSTLLPGLCDAEKMAEARDVLGEMVERYIAPKDNALFMKM 374
Query: 147 FNCE------DIGPEICNSL--LAVLASDGYI-------------DNALKMFDEMSHRGV 185
+C+ D ++ ++ L++ G+ D A K+ D++ + +
Sbjct: 375 MSCQCKAGDLDAAADVLKAMVRLSIPTEAGHYGVLIESFCKANVYDKAEKLLDKLIEKEI 434
Query: 186 --------EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFC 237
E + + I CE+ + G+ + ++ K+ + SV +I G
Sbjct: 435 VLRPQNDSEMEPSAYNLMIGYLCEHGRTGKAETFFRQLLKKG---VQDSVAFNNLIRGHS 491
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K + AF+++ + R D +YR++ E + G + + L + G P ++
Sbjct: 492 KEGNPDSAFEIMKIMGRRGVARDVDSYRLLIESYLRKGEPADAKTALDGMLESGHLPESS 551
Query: 298 DYREFILGLIVERRICEAKELGEVIVS-GKFTIDDDVLNALIGSVSSIDPRSAIVFFNFM 356
YR + L + R+ A + + +V G D VL L + A+ + +
Sbjct: 552 LYRSVMESLFDDGRVQTASRVMKSMVEKGAKENMDLVLKILEALLLRGHVEEALGRIDLL 611
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
+ G P L ++ LC++ K+ +++ + D D Y+ ++ L +G+
Sbjct: 612 MHNGCEPDFDHLLSV---LCEKEKTIAALKLLDFVLERDCIIDFSIYDKVLDALLAAGKT 668
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
AY ++ ++ KG D S + L+++ +E
Sbjct: 669 LNAYSILCKILEKGGSTDWSSRDELIKSLNQE 700
>gi|359476071|ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 629
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 194/467 (41%), Gaps = 73/467 (15%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+++L+ G A +F + +G + +W C+ + L++L ++K
Sbjct: 84 NLLISMLSKAGMAREAHFVFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLKK 143
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ + +++GF K EEAF +LDE++I CKP+ I Y ++ + G +
Sbjct: 144 M--GAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRI 201
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ +L K K G P Y + L + R E EL +VI + + D AL
Sbjct: 202 GDALDILGKMGKEGCDPDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAAL 261
Query: 338 IGSV--------------------SSIDPRSAIVFFNF----------------MIEKGR 361
G + ++D ++F+ M+EKG
Sbjct: 262 TGGLLKRDQVRVANKLLLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGL 321
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS------------- 408
VPT + + + C+ N DE ++++ + D+ S+N ++S
Sbjct: 322 VPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRR 381
Query: 409 ----------------------FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
+ C G++ E +++ M R GL+P V +N L++ C
Sbjct: 382 VLYRMEYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLC 441
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ LL A +++ + +G N +YNILI G +L +M + PDA
Sbjct: 442 KNGLLGTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAV 501
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
TY S ++GLC+E + A ++ ++ + + +I +T + ++ +R
Sbjct: 502 TYGSFIKGLCKEGKISVAIQLRDQMLESGLTPTITIYNTILAAMFQR 548
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 125/320 (39%), Gaps = 44/320 (13%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ ++ C K G+ LS+L + E ++ +V I++GFC+ ++EA ++ D
Sbjct: 293 YNIYFHCLCRENKSGEALSLLQSMV--EKGLVPTNVSYNTILNGFCRENHIDEALQLFDH 350
Query: 252 LRIRECKPDFIAYR-IVAEEFKLMGSVFEREVVLKKKR---KLGVAPRTNDYREFILGLI 307
PD +++ I++ K S R V+ + + KL V T + F
Sbjct: 351 FEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYF----- 405
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
IG +S + MI G PT+ T
Sbjct: 406 ----------------------------CAIGKISE-----CLELLESMIRNGLNPTVVT 432
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ L LCK +++ YF + SYN+++ G ++++M
Sbjct: 433 FNMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMY 492
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
L PD Y S ++ C+E + A +L DQM SG + + YN +++ + G+
Sbjct: 493 SWRLKPDAVTYGSFIKGLCKEGKISVAIQLRDQMLESGLTPTITIYNTILAAMFQRGKFW 552
Query: 488 GALRLFHNMLEKGVAPDATT 507
+ L +M G P+A +
Sbjct: 553 DIVSLLKDMTMDGCEPNAVS 572
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 3/192 (1%)
Query: 327 FTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
FT +L +G S +D S F FM+ PT TL+ L L K + E
Sbjct: 45 FTSLLKILKKWLGLGSLVDSMSV---FEFMLRLEYFPTEPTLNLLISMLSKAGMAREAHF 101
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
V++VL SYN ++ LC G+ A ++ +K+ G + + Y +L+
Sbjct: 102 VFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFS 161
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+E L A + D+M GC N+ TY +++ + G I AL + M ++G PD
Sbjct: 162 KEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIV 221
Query: 507 TYTSLLEGLCQE 518
TY +L L +
Sbjct: 222 TYNVILRELFHQ 233
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 87/194 (44%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
L G S+ + R+A F M G +P+ ++L + K + + V++ + +Y
Sbjct: 17 LDGMTSTGNLRAAFFFAEEMWRSGFLPSFTSLLKILKKWLGLGSLVDSMSVFEFMLRLEY 76
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
F + N+++S L +G REA+ V + + KG YN ++ A C+ A
Sbjct: 77 FPTEPTLNLLISMLSKAGMAREAHFVFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALA 136
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L + G N +Y L+ FS+ G E A + M G P+ TYT +++ LC
Sbjct: 137 LLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLC 196
Query: 517 QETNLQAAFEVFNK 530
E + A ++ K
Sbjct: 197 DEGRIGDALDILGK 210
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 65/164 (39%), Gaps = 35/164 (21%)
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS-------------------- 436
+ + ++N+++ + ++G LR A+ +EM R G P +
Sbjct: 7 YPNASTFNILLDGMTSTGNLRAAFFFAEEMWRSGFLPSFTSLLKILKKWLGLGSLVDSMS 66
Query: 437 ---------------FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
N L+ + + R A ++ + GC +YN ++
Sbjct: 67 VFEFMLRLEYFPTEPTLNLLISMLSKAGMAREAHFVFRVLLGKGCLKCAHSYNPILWALC 126
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+ G+ AL L +++ + G +A +YT+L+ G +E + AF
Sbjct: 127 KCGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAF 170
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 121/513 (23%), Positives = 205/513 (39%), Gaps = 87/513 (16%)
Query: 27 ARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYL--LTHHSLALGFFNWASQQPNFTHSP 84
++ W+ LE +L SLSPS+ L + A FFNWAS+ F H
Sbjct: 7 SKPWSTELESSLF------SLSPSISKTTFFQVLRFIASPPKAFEFFNWASRN-GFAHDS 59
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
SY +L L + +N + L F I G SV E
Sbjct: 60 RSYFMMLDILGRNGNLNIARNFL----------------FSIERRSNG-------SVKIE 96
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+F CN+LL + G + A+K+F M GV S I F + + +
Sbjct: 97 DRF---------CNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGR 147
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
S+ DE+ + +L I GFCK V+E F+ E+ C+PD + Y
Sbjct: 148 TNMAHSVFDEMCGTYGVTPDTYTFNIL-IRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTY 206
Query: 265 RIVAEEFKLMGSVFEREVVLKK--KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
+ + G V V+K K+ ++P Y + G +++ I E
Sbjct: 207 NTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDE-------- 258
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
A+V F M+ +G P T + L K LC+ K D
Sbjct: 259 --------------------------ALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFD 292
Query: 383 ELVEVY-KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
++ E+ + + D +YN +++ C +G EA + ++MK + PD + Y+ L
Sbjct: 293 KIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVL 352
Query: 442 MEACCREDLLRPAKKLWDQMF-------ASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+ C+ A++L+D++ GC+ + YN + + G+ A R+F
Sbjct: 353 IRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFR 412
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
+++KG D +Y +L+ G C+E +A +++
Sbjct: 413 QLMKKGTQ-DPPSYKTLIIGHCKEGTFEAGYKL 444
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 38/217 (17%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P T + L + CK + DE +K +S + D+ +YN +V LC +G++R A
Sbjct: 163 GVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIA 222
Query: 420 YGVIQEM--KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+ V++ M K K L PDV Y +L+ C + + A ++++M + G N TYN LI
Sbjct: 223 HNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLI 282
Query: 478 ------SKFSEVGEIEG------------------------------ALRLFHNMLEKGV 501
KF ++ EI G AL++F M E V
Sbjct: 283 KGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKV 342
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
PD+ TY+ L+ LCQ + + A ++F+K + D++L
Sbjct: 343 QPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILL 379
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 83/173 (47%), Gaps = 3/173 (1%)
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM-KRKGLDPDVSFYNS 440
+E ++++ ++ ++ + ++N ++ L GR A+ V EM G+ PD +N
Sbjct: 114 NEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNI 173
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK- 499
L+ C+ ++ + + +M C ++ TYN L+ G++ A + M++K
Sbjct: 174 LIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKM 233
Query: 500 -GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
++PD TYT+L+ G C + + A VF + V+ + +T + LC
Sbjct: 234 KDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLC 286
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 68/387 (17%), Positives = 157/387 (40%), Gaps = 35/387 (9%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++++ + ++I+ V +++ + + Y +I L + + K +
Sbjct: 241 VTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGG 300
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
P+ C N+L+ G D ALKMF +M V+ + + V I C+
Sbjct: 301 A-VGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQR 359
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVL-----IIHGFCKGKRVEEAFKVLDELRIREC 257
+ + D++ + + + ++ I CK + +A +V +L +++
Sbjct: 360 GDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQL-MKKG 418
Query: 258 KPDFIAYRIV----------AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
D +Y+ + +KL+ + R+ V P Y I G +
Sbjct: 419 TQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYV----------PDFETYVLLINGFL 468
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLS 366
+ A + E ++ + V ++++ + D R + F MI++ ++
Sbjct: 469 QKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNIN 528
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
++ + L + ++ ++L N Y DME ++ F+C +G+L +A ++
Sbjct: 529 LSTHTMRLLFGSGLRIKAFQIVELLYDNGYMVDMEE---LIGFICQNGKLLDAQKMLSFC 585
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRP 453
KG + D++ N ++E C+ + RP
Sbjct: 586 LEKGHNVDINVCNVVIEGLCK--MKRP 610
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 69/353 (19%), Positives = 138/353 (39%), Gaps = 27/353 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLK-QVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
++Y++++K L ++ + I +L V D+ Y ++ + N +A +F
Sbjct: 276 ITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFK 335
Query: 144 EVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF---- 199
++K + L+ L G + A ++FD++S + G + +
Sbjct: 336 KMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIF 395
Query: 200 ---CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C+N K + + ++ K+ + LII G CK E +K+L + R+
Sbjct: 396 DFLCKNGKTHKAERVFRQLMKKGTQ--DPPSYKTLII-GHCKEGTFEAGYKLLLFMLRRD 452
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
PDF Y ++ F G L++ K P+T+ + + L+ E+
Sbjct: 453 YVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLKNDFARESA 512
Query: 317 ELGEVIVSGKF----TIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
+++ K + + L GS I A + + G + + L
Sbjct: 513 SFVVLMIDRKIRQNINLSTHTMRLLFGSGLRI---KAFQIVELLYDNGYMVDMEELIGF- 568
Query: 373 KNLCKRNKSDELVEVYKVLS---ANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
+C+ K L++ K+LS + D+ NV++ LC R EA+G+
Sbjct: 569 --ICQNGK---LLDAQKMLSFCLEKGHNVDINVCNVVIEGLCKMKRPLEAFGL 616
>gi|297804088|ref|XP_002869928.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315764|gb|EFH46187.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 731
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 113/550 (20%), Positives = 239/550 (43%), Gaps = 50/550 (9%)
Query: 6 ATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHS 65
A++ + I++ ++ A + R W P + L++L ++PS+VA V+ L +
Sbjct: 91 ASERLSPIARFVLDAFRKNR--NHWGPSVVSELNKL---RRVTPSIVAEVLK--LGNDAT 143
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
A FF+WA +Q + H +Y++ L+ + A D + + + + +
Sbjct: 144 AAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEIL 203
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
I + + + V+ ++K + N ++ L +GY D AL ++++
Sbjct: 204 IRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDF----- 258
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
+E+ ++ S ++++ G CK R+EE
Sbjct: 259 --------------------------------KEDGLVEESTTFMILVKGLCKAGRIEEM 286
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
++L +R CKPD AY + + G++ V + ++ + P Y ++G
Sbjct: 287 LEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMKRDEIKPDVMAYGTLVVG 346
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPT 364
L + RI EL + + ID ++ LI G V+ RSA + +++ G +
Sbjct: 347 LCKDGRIERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACDLWKDLVDSGYIAD 406
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN-VMVSFLCTSGRLREAYGVI 423
L + + K LC N+ D+ +++V + D E+ + +MV+++ + RL + ++
Sbjct: 407 LGIYNAVIKGLCSVNQVDKAYNLFQVAIEEELEPDFETLSPIMVAYVVMN-RLSDFSNLL 465
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRP-AKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ + G P + + C ++ R A ++D + G G++ YNIL+ +
Sbjct: 466 ERIGELGY-PVTDYLTQFFKLLCADEEKRTMALDVFDILKTKG-HGSVSVYNILMEVLYK 523
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
+G+I+ +L LF+ M E G PD+++Y+ L + ++Q A K + + +++
Sbjct: 524 MGDIQKSLSLFYEMKEFGFEPDSSSYSIALCCFVDKGDVQEACSCHEKIIEMSRVPSKAA 583
Query: 543 LSTFMISLCR 552
+ LC+
Sbjct: 584 YLSLTKGLCQ 593
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 203/484 (41%), Gaps = 48/484 (9%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S ++Y I+ S + A D + K TL++S+Y II + Q N ++A ++
Sbjct: 376 SLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALV 435
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYI-----DNALKMFDEMSHRGVEFSTIGFGVFIW 197
E++ D I ++++ DGY L +F + G + + +G I
Sbjct: 436 REMEEEGIDAPIAIYHTMM-----DGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLIN 490
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
+ + K+ + L + V K E N + ++I+GF K K AF V +++
Sbjct: 491 LYTKVGKISKALE-VSRVMKEEGVKHNLKTYS-MMINGFVKLKDWANAFAVFEDMVKEGM 548
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL--------------------------- 290
KPD I Y + F MG++ +K+ +KL
Sbjct: 549 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 608
Query: 291 --------GVAPRTNDYREFILGLIVERRICEAKE-LGEVIVSGKFTIDDDVLNALIGSV 341
G P + + I GL+ +R++ +A E L E+ ++G + + G
Sbjct: 609 VFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYA 668
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
S D A +F + +G + T L K CK + + V K +SA + +
Sbjct: 669 SVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 728
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
YN+++ G + EA +IQ+MK++G+ PD+ Y S + AC + + A + ++M
Sbjct: 729 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM 788
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
A G N+KTY LI ++ E AL + M G+ PD Y LL L ++
Sbjct: 789 EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASI 848
Query: 522 QAAF 525
A+
Sbjct: 849 AEAY 852
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 155/373 (41%), Gaps = 3/373 (0%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
I SL+ A +D AL +M G+E S + + V + F + DE
Sbjct: 344 IYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEA 403
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
KR + +N S+ II+ C+ +E A ++ E+ Y + + + ++
Sbjct: 404 -KRIHKTLNASIYGK-IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVA 461
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ VV K+ ++ G P Y I +I +A E+ V+ + +
Sbjct: 462 DEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYS 521
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I G V D +A F M+++G P + +N+ C D ++ K +
Sbjct: 522 MMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL 581
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ ++ ++ SG +R + V M+R G P V +N L+ + + A
Sbjct: 582 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKA 641
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++ D+M +G S N TY ++ ++ VG+ A F + +G+ D TY +LL+
Sbjct: 642 VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKA 701
Query: 515 LCQETNLQAAFEV 527
C+ +Q+A V
Sbjct: 702 CCKSGRMQSALAV 714
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/381 (19%), Positives = 153/381 (40%), Gaps = 44/381 (11%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
FG+ + + + + + +R R + S I +IH + G+ ++EA + +
Sbjct: 310 FGLMVKFYGRRGDMHRARETFERMRAR--GITPTSRIYTSLIHAYAVGRDMDEALSCVRK 367
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI---- 307
++ + + Y ++ F G + + +++ + Y + I
Sbjct: 368 MKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCN 427
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
+ER +E+ E + I +++ G D + +V F + E G PT+ T
Sbjct: 428 MERAEALVREMEEEGIDAPIAIYHTMMD---GYTMVADEKKGLVVFKRLKECGFTPTVVT 484
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
L K K + +EV +V+ ++++Y++M++ A+ V ++M
Sbjct: 485 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 544
Query: 428 RKGLDPDVSFYNSLMEACC-----------------------------------REDLLR 452
++G+ PDV YN+++ A C + +R
Sbjct: 545 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 604
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
+ +++D M GC + T+N LI+ E ++E A+ + M GV+ + TYT ++
Sbjct: 605 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 664
Query: 513 EGLCQETNLQAAFEVFNKSVN 533
+G + AFE F + N
Sbjct: 665 QGYASVGDTGKAFEYFTRLQN 685
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/317 (18%), Positives = 123/317 (38%), Gaps = 14/317 (4%)
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
H KS + R + D + + V + + +I L++ + +KA + +E+
Sbjct: 595 HGYAKSGDMRRSLEVFDMMRRCGCVPTV----HTFNGLINGLVEKRQMEKAVEILDEMTL 650
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
++ AS G A + F + + G++ + + C++ ++
Sbjct: 651 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 710
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
L++ E+ R ++ S + ++I G+ + V EA ++ +++ KPD Y
Sbjct: 711 ALAVTKEMSAR--NIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSF 768
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL----IVERRICEAKELGEVIV 323
G + +++ LGV P Y I G + E+ + +E+ + +
Sbjct: 769 ISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 828
Query: 324 SGKFTIDDDVLNALIGSVSSIDP---RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ +L +L+ S + + M+E G + + T + SK LCK
Sbjct: 829 KPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEA 888
Query: 381 S-DELVEVYKVLSANDY 396
S EL E + D+
Sbjct: 889 SGGELTETLQKTFPPDW 905
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/469 (21%), Positives = 216/469 (46%), Gaps = 37/469 (7%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
L L +++W + + + S +L SL+ +++ + I S L
Sbjct: 83 LCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLD----------------- 125
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNA-----LKMFDEM 180
++ + + S+F+ + C+++ NS++A + Y +N+ + F
Sbjct: 126 --GFVRNGSDHQVHSIFHAISM-CDNV---CVNSIIADMLVLAYANNSRFELGFEAFKRS 179
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKG 239
+ G + S + + + + V + E+ +R+ I +V ++I+ CK
Sbjct: 180 GYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRK---IQPNVFTFNVVINALCKT 236
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS---VFEREVVLKKKRKLGVAPRT 296
++ +A V++++++ C P+ ++Y + + + +G +++ + VLK+ + V+P
Sbjct: 237 GKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNL 296
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNF 355
+ I G + + + ++ + ++ + N+LI + + S AI +
Sbjct: 297 TTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDK 356
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M+ G P L T + L CK + E ++++ + YN+++ C G+
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ + + + +EM+R+G+ PDV YN L+ CR + AKKL+DQ+ + G +L T++I
Sbjct: 417 IDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHI 475
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
L+ + GE A L M + G+ P TY +++G C+E NL+AA
Sbjct: 476 LMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 177/394 (44%), Gaps = 24/394 (6%)
Query: 151 DIGPEICNSLLAVLASDGYIDNALKMFDEMSH---RGVEFSTIGFGVFIWKFCENAKLGQ 207
++ P++C + L + I +L++ ++ H +S I F+ F N Q
Sbjct: 78 ELDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIR--SFLDGFVRNGSDHQ 135
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD-------ELRIRECKPD 260
V S+ + +N +N S+IA +++ + R E F+ +L CKP
Sbjct: 136 VHSIFHAISMCDNVCVN-SIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPL 194
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
IA ++ E + E V K+ + + P + I L ++ +A+++ E
Sbjct: 195 MIA--LLKEN-----RSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVME 247
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRS----AIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+ + + N LI + A M+E P L+T + L
Sbjct: 248 DMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFW 307
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K + ++V+K + D ++ SYN +++ LC G++ EA + +M G+ P++
Sbjct: 308 KDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLI 367
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN+L+ C+ D+L+ A ++ + G + YN+LI + ++G+I+ L M
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+G+ PD TY L+ GLC+ N++AA ++F++
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 182/428 (42%), Gaps = 62/428 (14%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQ-GKNT 135
QPN +++ ++ +L + ++N V++ +KV + + Y +I + G N
Sbjct: 220 QPNV----FTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNG 275
Query: 136 Q--KAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+ KA +V E+ N D+ P + N L+ D + ++K+F EM + V+ + I
Sbjct: 276 KMYKADAVLKEMVEN--DVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI-----IHGFCKGKRVEEAF 246
+ I C K+ + +SM D+ M++ V LI I+GFCK ++EA
Sbjct: 334 YNSLINGLCNGGKISEAISMRDK-------MVSAGVQPNLITYNALINGFCKNDMLKEAL 386
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
+ ++ + P Y ++ + + +G + + + ++ + G+ P Y I GL
Sbjct: 387 DMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
I AK+L F+ + KG +P L
Sbjct: 447 CRNGNIEAAKKL----------------------------------FDQLTSKG-LPDLV 471
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T L + C++ +S + + K +S +YN+++ C G L+ A + +M
Sbjct: 472 TFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM 531
Query: 427 -KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG- 484
K + L +V+ YN L++ ++ L A L ++M G N TY I+ + + G
Sbjct: 532 EKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGF 591
Query: 485 --EIEGAL 490
+IEG L
Sbjct: 592 VPDIEGHL 599
>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
Length = 1161
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 113/496 (22%), Positives = 213/496 (42%), Gaps = 42/496 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++IL + A VL+ ++ + + D Y +I L + K + +AF +
Sbjct: 261 VTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKR 320
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ +D+ P+ C N+L+ +G I++A +F+ M + + S + I +C N
Sbjct: 321 MRK--DDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRN 378
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
++ + LS+L E++ ++ + +++G+CK + A ++++L+ R +
Sbjct: 379 RRIDKALSILSEMQI--TGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKT 436
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
I+ + F +G + + + +LK + G+ P Y I G+ ++ E KE+ +
Sbjct: 437 MRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRM 496
Query: 323 VSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
+D + LI + A+ F + +G V + L +
Sbjct: 497 QKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMI 556
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY--- 438
E + +S + D S+N ++ C G + A+ V +M R G P+V Y
Sbjct: 557 TEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNL 616
Query: 439 --------------------------------NSLMEACCREDLLRPAKKLWDQMFASGC 466
N+L+ CR L A L ++M + C
Sbjct: 617 LRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNC 676
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
++ TY IL+S F G+I AL + MLEKGV PD YT LL GL E ++AA
Sbjct: 677 LPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASY 736
Query: 527 VFNKSVNHDVMLARSI 542
VF++ + + + A I
Sbjct: 737 VFHEIICKEGLYADCI 752
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/474 (21%), Positives = 197/474 (41%), Gaps = 4/474 (0%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
F SP+S ++IL +L + + L++ K L + ++ SL +KA
Sbjct: 187 FKASPVSCNTILNALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAE 246
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+ ++K +C N++L G AL + ++M V+ + + I K
Sbjct: 247 DMLQKMK-SCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKL 305
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
C + + +L +RK + + +I+GF + ++ A V + + + P
Sbjct: 306 CRIKRSTRAFLLLKRMRK--DDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVP 363
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
Y + + + + + +L + + GV P Y + G + A L
Sbjct: 364 SVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLM 423
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
E + S TI+ + LI + S A M E G P + T S L +C+
Sbjct: 424 EDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRM 483
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
K E E+ + + + Y ++ + C +G ++EA ++ R+GL + +
Sbjct: 484 AKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIH 543
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
N+L+ A RE ++ A+ M S + ++N +I + G I GA ++ +M+
Sbjct: 544 NALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVR 603
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
G +P+ TY +LL GLCQ +L A + + ++ + + ++ +CR
Sbjct: 604 YGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICR 657
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/539 (19%), Positives = 206/539 (38%), Gaps = 72/539 (13%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++ + +++ +L +++ + I + +Y +I + ++A F +
Sbjct: 471 ITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVD 530
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ P I N+LL +G I A MS + F ++ F I +C
Sbjct: 531 IYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGN 590
Query: 205 LGQVLSMLDEVRKRENS----------------------------------MINGSVIAV 230
+ S+ D++ + S I+
Sbjct: 591 IVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNA 650
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
L++ G C+ ++EA + +++ C PD Y I+ F G + V+L+ +
Sbjct: 651 LLL-GICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEK 709
Query: 291 GVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIG------SVSS 343
GV P T Y + GLI E ++ A + E+I D N+L+ +V++
Sbjct: 710 GVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNT 769
Query: 344 ID------------PRSA------------------IVFFNFMIEKGRVPTLSTLSNLSK 373
I P SA + + +M+ KG P T L
Sbjct: 770 IKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLIL 829
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
L + D V+ + + F D ++++++ ++ A V MK + P
Sbjct: 830 GLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSP 889
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+++++ R+ L + K+ +M G N Y L++ VGEI+ A RL
Sbjct: 890 SSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLK 949
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M G+ P +S++ GLC+ L+ A VF+ + ++ + +T M SLC+
Sbjct: 950 EEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCK 1008
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/488 (20%), Positives = 200/488 (40%), Gaps = 51/488 (10%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
+P+ ++++L + I + + + I+ DS + II S N AFSV+
Sbjct: 539 NPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVY 598
Query: 143 NE-VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
++ V++ P +C +LL L G++ A + + F +
Sbjct: 599 DDMVRYG---YSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGI 655
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
C L + L + +++ K N+ + +++ GFC+ ++ A +L + + P
Sbjct: 656 CRYGTLDEALDLCEKMIK--NNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVP 713
Query: 260 DFIAYR------IVAEEFKLMGSVFEREVVLKK-------------------------KR 288
D +AY I + K VF E++ K+ KR
Sbjct: 714 DTVAYTCLLNGLINEGQVKAASYVFH-EIICKEGLYADCIAYNSLMNGYLKSRNVNTIKR 772
Query: 289 KLG------VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+ V P + Y + G + + ++ L + +V D+ LI +S
Sbjct: 773 MMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLS 832
Query: 343 S---IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
ID A+ F M+ +G P L +++K ++V+ +
Sbjct: 833 ECGLID--IAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPS 890
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
++++ M++ L G L ++ V+ EM + GL P+ + Y +L+ A CR + A +L +
Sbjct: 891 SKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKE 950
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M A G + +I G++E A+ +F +M+ G+ P T+T+L+ LC+E+
Sbjct: 951 EMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKES 1010
Query: 520 NLQAAFEV 527
+ A +
Sbjct: 1011 KIADALHL 1018
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 109/518 (21%), Positives = 206/518 (39%), Gaps = 51/518 (9%)
Query: 54 RVINPYLLTHHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVK 111
R+I+ Y H +G F+ + +SP +Y ++L+ L + + +
Sbjct: 580 RIIDSY--CHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLL 637
Query: 112 VNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEICNS--LLAVLASDG 168
+D + ++ + + +A + + +K NC P+I LL+ G
Sbjct: 638 DIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCL---PDIHTYTILLSGFCRKG 694
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVI 228
I AL + M +GV T+ + + ++ + E+ +E + I
Sbjct: 695 KILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEG--LYADCI 752
Query: 229 AV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
A +++G+ K + V +++ ++ E P+ +Y I+ + G + + K
Sbjct: 753 AYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYM 812
Query: 288 RKLGVAPRTNDYREFILGLIVERRI-CEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP 346
+ G+ P YR ILGL I K L ++++ G F D V + LI + S
Sbjct: 813 VRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFP-DRLVFDILITAFSEKSK 871
Query: 347 -RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD-------ELVEVYKVLSANDYFT 398
+A+ FN M P+ T S + L ++ D E+++V + Y
Sbjct: 872 MHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIA 931
Query: 399 -------------------DMESYNV---------MVSFLCTSGRLREAYGVIQEMKRKG 430
+M++ + ++ LC G+L EA V M R G
Sbjct: 932 LVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSG 991
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+ P V+ + +LM + C+E + A L M ++ +YN+LI+ + I AL
Sbjct: 992 MVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDAL 1051
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
L+ M KG+ P+ TTY +L + +Q E+
Sbjct: 1052 DLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELL 1089
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 177/404 (43%), Gaps = 42/404 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N +L L + L + +M RG++ + + + I FC+ + S+L ++ K
Sbjct: 66 NKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILK 125
Query: 218 ---RENSMINGSVIAVLIIHG-----FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+ N++ ++I L ++G C ++++A + +++ + PD + I+ +
Sbjct: 126 MGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVD 185
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
F G V E + VL G+ P Y + G + +++ +AK +
Sbjct: 186 GFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSI----------- 234
Query: 330 DDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
FN M + G P + + S L CK DE +E+ K
Sbjct: 235 -----------------------FNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLK 271
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+ ++ +Y+ ++ LC SG++ A ++ EM +G P++ Y+S+++A C+
Sbjct: 272 EMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNH 331
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
+ A L QM G N+ TY ILI + G++E A ++F ++L KG + TYT
Sbjct: 332 QVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYT 391
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+++G C + A + +K ++ + ++SL ++
Sbjct: 392 VMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKK 435
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 172/394 (43%), Gaps = 46/394 (11%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSH 182
I+ SL++ K+ + +++F I P + CN L+ G+I +A + ++
Sbjct: 68 ILGSLVKSKHYHTVLYLSQKMEF--RGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILK 125
Query: 183 RGVEFSTIGFGVFIWKFCENAKL-------GQVLSMLDEVRKRENSMINGSVIA-VLIIH 234
G + +TI I C N K+ G++ +D K IN V +++
Sbjct: 126 MGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVD 185
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
GFCK RV+EA VL + I+ KP + Y + + + L+ V + + + +LGV+P
Sbjct: 186 GFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSP 245
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFN 354
Y I G C+ K + E A+
Sbjct: 246 DIQSYSILINGF------CKIKMMDE----------------------------AMELLK 271
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M K +P + T S+L LCK K +++ + ++ +Y+ ++ LC +
Sbjct: 272 EMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNH 331
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
++ A ++ +MK +G+ P++ Y L++ C+ L A+K+++ + G + N+ TY
Sbjct: 332 QVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYT 391
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
++I F + G + AL L M + G P+A TY
Sbjct: 392 VMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTY 425
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 88/195 (45%), Gaps = 10/195 (5%)
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
D A+ FN ++++ P + + +L K ++ + + + ++ + N
Sbjct: 42 DVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 101
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE----------DLLRPA 454
++++ C G + A+ V+ ++ + G P+ N+L++ C L+ A
Sbjct: 102 ILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDA 161
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
L+++M + ++ T+ IL+ F + G ++ A + M+ +G+ P TY SL++G
Sbjct: 162 VDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDG 221
Query: 515 LCQETNLQAAFEVFN 529
+ A +FN
Sbjct: 222 YFLVKQVNKAKSIFN 236
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 209/496 (42%), Gaps = 12/496 (2%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL F + + ++Y++I+ L S + A + +++ D Y +I
Sbjct: 20 ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLI 79
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRG 184
SL + + ++A + + + P + + L+ L G ID A ++ EM+ +
Sbjct: 80 DSLCKAGDLEEARRLHGD--MSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKS 137
Query: 185 VEF--STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRV 242
+ + I + F+ C+ + + ++ +R + +V +I G CK ++
Sbjct: 138 CDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQI 197
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
+EA V D++ P+ I Y + + +++ GV P Y
Sbjct: 198 DEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVL 257
Query: 303 ILGLIVERRICEAKELGEVIVSGKFT----IDDDV-LNALI-GSVSSIDPRSAIVFFNFM 356
+ R+ EA EL + S T + D V N LI G+ + + A F M
Sbjct: 258 VDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEM 317
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
+ K P + T L LCK + + ++ ++ ++ +YN +V LC SGR+
Sbjct: 318 VAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRI 377
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
EA ++EM G PD Y SL+ A CR A +L ++ + G + TYNIL
Sbjct: 378 EEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNIL 437
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+ + G+ E A+ + M+ KG PD+ T+ + GL + NL E+ + +
Sbjct: 438 VDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGM 497
Query: 537 MLARSILSTFMISLCR 552
+ + S+ + +CR
Sbjct: 498 LPDATTCSSILDWVCR 513
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 43/243 (17%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
R+ +F M G PT+ T + + LCK N +E+++ L + D+ +YN +
Sbjct: 19 RALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTL 78
Query: 407 VSFLCTSGRLREA------------------YGV-----------------IQEMKRKGL 431
+ LC +G L EA Y V IQEM RK
Sbjct: 79 IDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSC 138
Query: 432 D--PDVSFYNSLMEACCREDLLRPAKKLWDQMFASG--CSGNLKTYNILISKFSEVGEIE 487
D P++ YNS ++ C++ + A +L + S + T++ LI + G+I+
Sbjct: 139 DVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQID 198
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSIL 543
A +F +M+ G P+ TY +L+ GLC+ ++ A + +K V DV+ ++
Sbjct: 199 EACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLV 258
Query: 544 STF 546
F
Sbjct: 259 DAF 261
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 160/379 (42%), Gaps = 6/379 (1%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVN--KITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
++Y+S L L +++ ++ +++ D+ + +I L + +A SVF
Sbjct: 145 ITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVF 204
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+++ N+L+ L ++ A M + M +GV I + V + FC+
Sbjct: 205 DDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKA 264
Query: 203 AKLGQVLSMLDEVRKR---ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+++ + L +L + R N ++ V ++I G CK E+A + +E+ + +P
Sbjct: 265 SRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQP 324
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D + + + + G V +L LGV P Y + GL RI EA +
Sbjct: 325 DVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFL 384
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
E +VS D +L+ ++ A+ + + G P T + L L K
Sbjct: 385 EEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKS 444
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
K+++ + V + + + D ++ S L SG L +++ + KG+ PD +
Sbjct: 445 GKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTC 504
Query: 439 NSLMEACCREDLLRPAKKL 457
+S+++ CR L K +
Sbjct: 505 SSILDWVCRSGKLDDVKAM 523
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 435 VSFYNSLMEACCRE-DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
V+ YN ++++ CR D R + +M G + + TYN +I+ + ++ + LF
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
++E+G PD TY +L++ LC+ +L+ A
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEA 91
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 128/514 (24%), Positives = 211/514 (41%), Gaps = 73/514 (14%)
Query: 26 PARKWTPLLEQTLHQLGLRDSLSPSLVARVI-----NPYLLTHHSLALGFFNWASQQPNF 80
P++ +T LL+ + ++L PSL + NP L H AL FF W Q F
Sbjct: 42 PSQIFTILLQPQWRKNPSFNTLIPSLTPTHLSSLFNNPNL--HPLTALNFFKWIHYQHGF 99
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
H+ SY +L L + + A ++V + K + S RF++ L T FS
Sbjct: 100 IHTVHSYQPLLFILVRNGFLRAAENVRNSMI--KSCVSSHEARFVLNLL-----THHEFS 152
Query: 141 VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+ N L VL+ G ID +F +M + GVE + I F + C
Sbjct: 153 -----------LSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHC 201
Query: 201 ENAKLGQVLSMLDEVRKR------ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
K+G V+ V K + S +I G+CK + +A+KV + +
Sbjct: 202 ---KIGNVV-----VAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQ 253
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
C + ++Y + F +G + E + + ++ G P Y + CE
Sbjct: 254 EGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAF------CE 307
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
GK T A+ FF M+E G P + T + L
Sbjct: 308 V---------GKET-------------------EALKFFEEMVENGIEPNVYTYTVLIDY 339
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
CK K DE +E+ + + + +N ++ C G + +A V+ MK + P+
Sbjct: 340 FCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPN 399
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
YN L+ CR+ + A L ++M+ + S NL TYN LI + ++ A RL H
Sbjct: 400 SRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHH 459
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
M++ G PD T+ + ++ LC+ ++ A +VF
Sbjct: 460 LMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVF 493
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 155/369 (42%), Gaps = 3/369 (0%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+A G ALK F+EM G+E + + V I FC+ K+ + + ML + E
Sbjct: 301 LVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTML--E 358
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+++ V +I G+CK +E+A VLD +++ + P+ Y + F S+
Sbjct: 359 KGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDR 418
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+L K + ++P Y I GL R + A L +++ F D A I
Sbjct: 419 AMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFID 478
Query: 340 SVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
+ + A F + EK + L CK K + ++K + F
Sbjct: 479 CLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFP 538
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+ ++NV++ L G++ +A ++ M + P V Y L+E RE A
Sbjct: 539 NSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFL 598
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
DQM +SGC N+ TY I + G + A + + E+G+ D+ Y L+
Sbjct: 599 DQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCI 658
Query: 519 TNLQAAFEV 527
L +AF V
Sbjct: 659 GQLDSAFGV 667
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/451 (20%), Positives = 189/451 (41%), Gaps = 53/451 (11%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAV 163
VL +K+NK+ +S Y +I + K+ +A ++ N++ N + P + N+L+
Sbjct: 387 VLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYEN--KLSPNLVTYNTLIHG 444
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L +D+A ++ M G F FI C+ K+ Q + + ++++
Sbjct: 445 LCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEA- 503
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
+ +I G+CK ++ +A + + C P+ I + ++ + + G V + +
Sbjct: 504 -NEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSL 562
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
+ K P + Y +++E + E+
Sbjct: 563 VDVMGKFDAKPTVHTYT-----ILIEEILRES---------------------------- 589
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
D A +F + MI G P + T + K C++ + E E+ + D Y
Sbjct: 590 -DFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIY 648
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+V+V+ G+L A+GV+ M G +P Y+ L++ ++++
Sbjct: 649 DVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLK-----------HLIFEKYNK 697
Query: 464 SGCSGNLKTYNILI--SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G +L + NI + + ++ + E LF M+E+G P+ TY+ L++GLC+ +L
Sbjct: 698 EGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHL 757
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
AF +FN + + +I ++ + S C+
Sbjct: 758 SLAFRLFNHMKESGISPSENIHNSLLSSCCK 788
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 134/298 (44%), Gaps = 5/298 (1%)
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
+P+ I++ + +G+V + K G + Y ILG + +A +
Sbjct: 187 EPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYK 246
Query: 318 LGEVIVS-GKFTIDDDVLNALIG--SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+ E++ G + N + G V ID A+ F M E G P + T + L
Sbjct: 247 VFEIMPQEGCLRNEVSYTNLIHGFCEVGKID--EALELFFQMKEDGCFPDVPTYTVLVAA 304
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
C+ K E ++ ++ + N ++ +Y V++ + C G++ E ++ M KGL
Sbjct: 305 FCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSS 364
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V +N+L++ C+ ++ A + D M + N +TYN LI F ++ A+ L +
Sbjct: 365 VVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLN 424
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M E ++P+ TY +L+ GLC+ + +A+ + + + + + F+ LC+
Sbjct: 425 KMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCK 482
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 96/205 (46%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A +F +++ G T ++L CK ++ + +V++++ + SY ++
Sbjct: 209 AKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIH 268
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C G++ EA + +MK G PDV Y L+ A C A K +++M +G
Sbjct: 269 GFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEP 328
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ TY +LI F +VG+++ + + MLEKG+ + +L++G C+ ++ A V
Sbjct: 329 NVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVL 388
Query: 529 NKSVNHDVMLARSILSTFMISLCRR 553
+ + V + + CR+
Sbjct: 389 DSMKLNKVCPNSRTYNELICGFCRK 413
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 131/311 (42%), Gaps = 20/311 (6%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D A D+M G + + + + FI +C +L + M+ ++ K E +++ + V
Sbjct: 592 DRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKI-KEEGILLDSFIYDV 650
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
L+ C G+ ++ AF VL + C+P Y S+ + ++ +K K
Sbjct: 651 LVNAYGCIGQ-LDSAFGVLIRMFDTGCEPSRQTY-----------SILLKHLIFEKYNKE 698
Query: 291 GVAPRTNDYREFI----LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP 346
G+ N + + I + I L E +V + + + LI + ++
Sbjct: 699 GMGLDLNSTNISVDNANIWKIADFEIITM--LFEKMVEQGCVPNVNTYSKLIKGLCKVEH 756
Query: 347 RS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
S A FN M E G P+ + ++L + CK +E + + + ++ +ESY +
Sbjct: 757 LSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKL 816
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+V L G +A + + + G + D + L++ R+ + +L D M +G
Sbjct: 817 LVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTG 876
Query: 466 CSGNLKTYNIL 476
C + T+ +L
Sbjct: 877 CRLHSDTHTML 887
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 182/433 (42%), Gaps = 56/433 (12%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G +D A ++ DEM RGV+ + I C ++ + L K + +V
Sbjct: 13 GQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQF----KSMGEECSPNV 68
Query: 228 IAV-LIIHGFCKGKRVEEAFKVLDELRIR-----ECKPDFIAYRIVAEEFKLMGSVFERE 281
I +++G CK R++E ++ D++ R C+PD I+Y V + V +
Sbjct: 69 ITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAY 128
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-----GEVIVSGKFTIDDDVLNA 336
K+ R +G AP Y I GL R+ EA L GE +V NA
Sbjct: 129 EYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAM-----YYNA 183
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
++ G P + M EKG + + + L K ++ ++ + ++ L +
Sbjct: 184 VVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSG 243
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR-------E 448
++ +YNV V LC +G++ EAY ++ EM + PDV Y+S+++ C+ +
Sbjct: 244 KKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKAD 303
Query: 449 DLL----------------------------RPAKKLWDQMFASGCSGNLKTYNILISKF 480
D+ R A ++ + M +G L+TYN+L+
Sbjct: 304 DVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCV 363
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
+E AL ++H M K PDA TY L++ LC+ + A E + +V+
Sbjct: 364 CGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNG 423
Query: 541 SILSTFMISLCRR 553
+I + LC++
Sbjct: 424 AICHALVEVLCKQ 436
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 195/452 (43%), Gaps = 32/452 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY +++ +L +++++ K+++ + Y +I L + +A+S+ +
Sbjct: 109 ISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQ 168
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI---WKF 199
+K ED+ P N+++ G L++ M +G + I F + WK
Sbjct: 169 LKG--EDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKN 226
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
E K Q L + K+ N V + +HG CK +V+EA+++L E+ + P
Sbjct: 227 DEQEKACQFFERLLKSGKKPNV-----VTYNVAVHGLCKAGKVDEAYRILLEMVESKVTP 281
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D I Y + + F G + + + V + P + + G ++ EA +
Sbjct: 282 DVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVH 341
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
E +V+ F N L+ V D SA+ ++ M K R P +T + L + LC+
Sbjct: 342 EDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRA 401
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV---------------- 422
+ DE E V+ A++ + + +V LC G + EA V
Sbjct: 402 RRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEA 461
Query: 423 ---IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
I++M KG+ PD + Y +++ + C D + A +++M + GC+ L TY +LI +
Sbjct: 462 VEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGE 521
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
+ A R+F M+ G P A T +L
Sbjct: 522 ACSADMADDAFRIFEAMVAAGFTPQAQTMRTL 553
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 150/315 (47%), Gaps = 13/315 (4%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I+GFCK +V++AF++LDE++ R K D + + + + G + E L++ + +G
Sbjct: 5 VINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDE---ALEQFKSMG 61
Query: 292 --VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP--- 346
+P Y + GL RI E EL + + ++ +I + ID
Sbjct: 62 EECSPNVITYNTVVNGLCKANRIDEGLELFDDM-EKRYEASHGCEPDVISYSTVIDALCK 120
Query: 347 ----RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
A +F M G P + T S+L LCK ++ DE + L D
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN +V+ G+ E ++ MK KG ++ +N+++ A + D A + ++++
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
SG N+ TYN+ + + G+++ A R+ M+E V PD TY+S+++G C+ +
Sbjct: 241 KSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMD 300
Query: 523 AAFEVFNKSVNHDVM 537
A +VF + + H+ +
Sbjct: 301 KADDVFTRMMVHECI 315
>gi|297741611|emb|CBI32743.3| unnamed protein product [Vitis vinifera]
Length = 772
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 129/554 (23%), Positives = 246/554 (44%), Gaps = 49/554 (8%)
Query: 23 RTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTH 82
R R WT L+ ++ L SLV V++ + H AL FF W + F H
Sbjct: 95 RMMANRAWTTRLQNSIRSL--VPQFDHSLVWNVLHGSRNSDH--ALQFFRWVERAGLFRH 150
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
++ I++ L + ++N +L + + D ++ +I S + Q++ VF
Sbjct: 151 DRDTHLKIIEILGRASKLNHARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVF 210
Query: 143 NEVKFNCEDIGPEIC----NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
++K ++G E ++L V+ G A + F+ M + GV + + + IW
Sbjct: 211 QKMK----ELGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWG 266
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIREC 257
F + K+ +E+++R I+ V+ +I+G+ + K++EEA K E++ R
Sbjct: 267 FFLSLKVETANRFFEEMKERR---ISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNI 323
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-- 315
+P I+Y + + + +G V + + ++ + G+ P Y + GL ++ EA
Sbjct: 324 EPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQN 383
Query: 316 --KELGEVIVSGKFTIDDDVLNALI------GSV-SSIDPRSAIVFFNFMIEKGRVPTLS 366
KE+ E ++ K D+ + LI G + ++ D A++ + E G L
Sbjct: 384 VVKEMVERYIAPK---DNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLI 440
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFT------DMES--YNVMVSFLCTSGRLRE 418
+N CK D V++ L + +MES YN+++ +LC SG+ +
Sbjct: 441 ------ENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSK 494
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A + +++ +KG+ ++F N+L+ +E A ++ M Y +LI
Sbjct: 495 AETLFRQLMKKGVQDPIAF-NNLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIE 553
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN----KSVNH 534
F + GE A M+E G PD++ + S++E L ++ +Q A V N K V
Sbjct: 554 SFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKE 613
Query: 535 DVMLARSILSTFMI 548
++ L IL ++
Sbjct: 614 NMDLVAKILEALLL 627
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 90/455 (19%), Positives = 178/455 (39%), Gaps = 70/455 (15%)
Query: 54 RVINPYLLTHHSLALGFFNWASQQP-----------NFTHSPLSYHSILKSLSLSRQINA 102
R I+P ++T++++ G++ + N + +SY +++K +++
Sbjct: 286 RRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDD 345
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE---ICNS 159
+ +++K I ++ Y ++P L G+ +A +V E+ I P+ I
Sbjct: 346 GLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERY--IAPKDNSIFMR 403
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ G +D A + M + +GV I FC++ + + +LD++ ++E
Sbjct: 404 LITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKE 463
Query: 220 ------NSMINGSVIAVLIIHGFCKGKRV------------------------------- 242
NS+ S LII C +
Sbjct: 464 IILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQDPIAFNNLIRGHSKE 523
Query: 243 ---EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
E AF++L + RE + AYR++ E F G + + L + G P ++ +
Sbjct: 524 GAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLF 583
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDD----VLNALI--GSVSSIDPRSAIVFF 353
R + L + RI A + +V + D +L AL+ G V A+
Sbjct: 584 RSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEE-----ALGRI 638
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
+ ++ G P L ++ LC + K+ +++ DY SY ++ L T+
Sbjct: 639 DLLMNNGCEPDFDGLLSV---LCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTA 695
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
G+ AY ++ ++ +KG D S L+ + E
Sbjct: 696 GKTLNAYSILCKIMQKGGATDWSSCKDLIRSLNEE 730
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/169 (19%), Positives = 73/169 (43%)
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E V+V++ + ++SY+ + + GR A M +G+ P YN ++
Sbjct: 205 ESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMI 264
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+ A + +++M S ++ TYN +I+ + + ++E A + F M + +
Sbjct: 265 WGFFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIE 324
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
P +YT++++G + +F + + + ST + LC
Sbjct: 325 PTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLC 373
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 120/506 (23%), Positives = 216/506 (42%), Gaps = 32/506 (6%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
S ALGFF + +PN + S++ +L+ + ++++L+++K IT + + +
Sbjct: 14 SDALGFFQSSISEPNVS----SFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGV 69
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASD--------------GYI 170
I+ +L ++ KA S FN E C A+ A D G
Sbjct: 70 ILSALCARRDLDKAVSYFNSRT-------EEACRLFEAIEAPDSVTYTAIVDGLFKAGNY 122
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE-VRKRENSMINGSVIA 229
D L+ +++M E + + + V + C+ K+ + + +E +RK I +
Sbjct: 123 DAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDI---IAY 179
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+I G K RV+EA K++D + R P +AY + G + E +++ R+
Sbjct: 180 SSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRR 239
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS- 348
+ PR + Y + G I ++ EA + E + D I ++ SI R
Sbjct: 240 RRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREE 299
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A F M+EKG P + T + N CK V +++ + Y +++
Sbjct: 300 AEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMD 359
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM--FASGC 466
S RL EA + Q + + G+ P YN+++ A C+ + A +L +M
Sbjct: 360 GFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEEL 419
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
++ TY+++I +VG E A L M++ GV PD TYTSL++ L + A E
Sbjct: 420 EPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAME 479
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+ + + + T + LCR
Sbjct: 480 LLEEMLKAGIFPDDHTYGTLVQILCR 505
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 129/578 (22%), Positives = 239/578 (41%), Gaps = 63/578 (10%)
Query: 4 RPATDLATRISQAIISASNR-TRPARKWTPLLEQTLHQLG----LRDSLSPSLVARVINP 58
R D QA++SA R +P+R+ L+ + G R + S+ AR I+P
Sbjct: 269 RKVLDTQPENWQAVVSAFERIKKPSRREFGLMVGYYARRGDMHRARQTFE-SMRARGIDP 327
Query: 59 ----YLLTHHSLALGFFNWAS-------QQPNFTHSPLSYHSILKSLSLSRQINAIDSVL 107
Y H+ A+G + + S ++Y ++ + A D
Sbjct: 328 SSHVYTSLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWF 387
Query: 108 KQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASD 167
K+ K L++ +Y II + Q N +A ++ E++ D +I ++++ D
Sbjct: 388 KKAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMM-----D 442
Query: 168 GYI-----DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS---MLDEVRKRE 219
GY + L +F + G S I +G I + + K+ + L M+ V +
Sbjct: 443 GYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKH 502
Query: 220 NS-----MING--------SVIAVL-----------------IIHGFCKGKRVEEAFKVL 249
N +ING + AV II FC ++ A ++
Sbjct: 503 NMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMV 562
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
E++ C+P + + F G + + R+ G P + + +LGL+ +
Sbjct: 563 KEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEK 622
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTL 368
R++ +A E+ + + + D+ ++ +++ D A +F M +G + T
Sbjct: 623 RKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTY 682
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
L K CK + + V + ++A + YN+++ G + EA ++Q+M +
Sbjct: 683 EALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQ 742
Query: 429 KGLDPDVSFYNSLMEACCRE-DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
+G+ PD+ Y S + ACC+ D+LR A K ++M A+G N+KTY LI ++ E
Sbjct: 743 EGVQPDIHTYTSFINACCKAGDMLR-ATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPE 801
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
AL F + G+ PD Y L+ L + A+
Sbjct: 802 KALSCFEELKLAGLKPDKAVYHCLMTSLLSRATVAEAY 839
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 165/407 (40%), Gaps = 58/407 (14%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
FG+ + + + + + +R R + S + +IH + G+ +EEA + +
Sbjct: 297 FGLMVGYYARRGDMHRARQTFESMRAR--GIDPSSHVYTSLIHAYAVGRDMEEALSCVRK 354
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ + + Y IV F G+ + KK ++ R + +I G I+
Sbjct: 355 MNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKE-----RHTNLNAYIYGNII-YA 408
Query: 312 ICEA----------KELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKG 360
C+A +E+ E + D+ + ++ + I + ++ F + E G
Sbjct: 409 YCQACNMDRAEALVREMEEEGIDAPL----DIYHTMMDGYTMIRNEEKCLIVFKRLKECG 464
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P++ T L K K + +EV K++ + +M++Y+++++ A+
Sbjct: 465 FAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAF 524
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACC---------------------------------- 446
V +++ + GL PDV YN++++A C
Sbjct: 525 AVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGF 584
Query: 447 -REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
R +R A +++D M SGC + T+N L+ E ++E A+ + M GV+PD
Sbjct: 585 ARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDE 644
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
TYT+++ G + AFE F K N + L + + C+
Sbjct: 645 HTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCK 691
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/395 (19%), Positives = 167/395 (42%), Gaps = 3/395 (0%)
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
+ +A F ++ D + SL+ A ++ AL +M+ G+E S + +
Sbjct: 309 DMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYS 368
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
+ + F + + ++R ++ + I II+ +C+ ++ A ++ E+
Sbjct: 369 IVVGGFAKFGNAEAADCWFKKAKERHTNL--NAYIYGNIIYAYCQACNMDRAEALVREME 426
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
Y + + + ++ + + +V K+ ++ G AP Y I ++
Sbjct: 427 EEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVS 486
Query: 314 EAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
+A E+ +++ S + + LI G + D +A F +I+ G P + +N+
Sbjct: 487 KALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNII 546
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
K C D + + K + ++ ++ +G +R A + M+R G
Sbjct: 547 KAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCI 606
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P V +N+L+ + + A ++ D+M +G S + TY ++ ++ +G+ A
Sbjct: 607 PTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEY 666
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
F M +G+ D TY +LL+ C+ +Q+A V
Sbjct: 667 FTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAV 701
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 118/542 (21%), Positives = 208/542 (38%), Gaps = 108/542 (19%)
Query: 31 TPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSI 90
+ L T+HQ+ L L P+ + H FF WA P++THS S S+
Sbjct: 37 STLTSTTIHQVILH------LKQHRYEPFFIFH------FFKWAQSIPHYTHSLHSSWSM 84
Query: 91 LKSLSLSRQINAIDSVLKQVKVNKI-----------------TLDSSVYRFIIPSLIQGK 133
+ L+ R VL ++ +I ++S V +I+ + K
Sbjct: 85 IHMLTKHRHFKTAQQVLDKMAQREILSSPSVLTSLVRIHDDPEVNSHVLSWIVIHYAKSK 144
Query: 134 NTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
T A VF ++ C ++ P + C L+ L DG K++ M GV
Sbjct: 145 MTHDAVQVFEQMSL-C-NLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQDGV------ 196
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ + +IH K + VE A +L+E
Sbjct: 197 -------------------------------VPNIYVYNCLIHACSKSRDVERAEFILNE 225
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ ++ PD Y + + G +E V K + G+ Y I G E +
Sbjct: 226 MEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGK 285
Query: 312 ICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
+ EA + GE+ K +P T +
Sbjct: 286 MREAMRMFGEI-------------------------------------KDAIPNHVTYTT 308
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L CK N+ +E + + +++ A + + +YN ++ LC+ GR+R+A ++ EM +
Sbjct: 309 LIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERK 368
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+ D N+L+ A C+ L A K +M +G + N TY LI F + E+E A
Sbjct: 369 VQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAK 428
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
L ML+ G +P+ TY+ +++ C++ N A + ++ ++ L S+ + L
Sbjct: 429 ELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRL 488
Query: 551 CR 552
C+
Sbjct: 489 CK 490
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 184/409 (44%), Gaps = 10/409 (2%)
Query: 150 EDIGPEICNSLLAVLASDGY-----IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
E GPE + L DGY +++A ++ M S I CE +
Sbjct: 120 EACGPEATAATYGALV-DGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGR 178
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ L +LD + R V +++ CKG+ +A +++D +R C+P+ + Y
Sbjct: 179 VADALVVLDGMLCR--GCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTY 236
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
++ + G V + +L G P T +Y + G R +A E+ + +V
Sbjct: 237 NVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVR 296
Query: 325 GKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
++ LN +I ++ + ++ M + G + T + + +C++ D
Sbjct: 297 ENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDS 356
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+E+ + + D+ +YN ++ LC++ R +A ++ +M + PD S +N+++
Sbjct: 357 ALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIIS 416
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C++ L+ A +++ QM GC+ N TY+ +I ++ G++E AL L + M KG
Sbjct: 417 FWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNT 476
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
D Y L E L +E ++ +V +K + + + +T ++ LCR
Sbjct: 477 D-KMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCR 524
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
R A+ +FM +G P T + + +C+ D+ E+ L + + +YN +
Sbjct: 215 RQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTV 274
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ C+ R +A ++ EM R+ P+ + N ++ CR+ LL+ ++M GC
Sbjct: 275 LKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGC 334
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ N+ TYN +IS E G ++ AL L NM G PD TY ++L+GLC + A E
Sbjct: 335 TANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEE 394
Query: 527 VFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+ K +D + S +T + C++ LI
Sbjct: 395 LMIKMSQNDRLPDNSTFNTIISFWCQKGLI 424
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G T +T L C+ ++ V + A+ + ++N ++ LC GR+ +A
Sbjct: 123 GPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADA 182
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
V+ M +G PDV YN L++A C+ R A +L D M A GC N TYN++I
Sbjct: 183 LVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDA 242
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
G+++ A L +++ +G P+ Y ++L+G C A E+ ++ V +
Sbjct: 243 MCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPN 302
Query: 540 RSILSTFMISLCRRVLI 556
+ L+ + +LCR+ L+
Sbjct: 303 EATLNVIINTLCRKGLL 319
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 90/186 (48%), Gaps = 5/186 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+++LK L + + + ++ ++ N D+S + II Q +AF VF +
Sbjct: 374 VTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQ 433
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + ++++ L G ++ AL++ +EM+++G + + V + K
Sbjct: 434 MPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDK 492
Query: 205 LGQVLSMLDEVRKRENSMING-SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ +V+ + V K ++S I+ +V+ ++ G C+ + + A VL ++ C PD
Sbjct: 493 IEEVVQV---VHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDEST 549
Query: 264 YRIVAE 269
Y I+ E
Sbjct: 550 YIILIE 555
>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 127/537 (23%), Positives = 220/537 (40%), Gaps = 72/537 (13%)
Query: 26 PARKWTPLLEQTLHQLGLRDSLSPSLV----ARVINPY--LLTHHSLALGFFNWASQQPN 79
PA ++ EQ ++ +DS+ + +RV+ + L +LA FF ++
Sbjct: 34 PAAQYPIAEEQAVYTYS-KDSVGDRFIDLNTSRVVEIFYNLKNEPNLAWSFFTQL-KESG 91
Query: 80 FTHSPLSYHSILKSLS----------------------LSRQINAIDSVLKQVKVNKITL 117
F H+ +Y ++++ L L I A+ VL++
Sbjct: 92 FQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITALFDVLREGGGEVEGE 151
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEI--CNSLLAVLASDGYIDNA 173
SSV ++ L++ F + F + G P I CN L+ L G ID A
Sbjct: 152 HSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMA 211
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN-GSVIAVLI 232
+ ++ + G+ + +G+FI C G +D R+ E + +N +V
Sbjct: 212 VAIYRHLKRLGLNPNDYTYGIFIKALCRK---GNFEEAVDVFREMEEAGVNPNAVTCSTY 268
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I G C KR + ++ L LR D AY V F + E E V G+
Sbjct: 269 IEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGI 328
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVF 352
AP +I G ++ C+A L + A+
Sbjct: 329 APDG-----YIYGALIHA-YCKAGNLLQ----------------------------AVAL 354
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
N M+ G +S++ + LC+ + E+V+ +K + F D YN++V LC
Sbjct: 355 HNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCK 414
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G++ EA ++ EMK + + DV Y +L+ C + L AK ++++M G ++ T
Sbjct: 415 LGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVT 474
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
YNIL+ FS G + AL L + +G+ P++ T+ ++EGLC ++ A N
Sbjct: 475 YNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLN 531
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/514 (20%), Positives = 218/514 (42%), Gaps = 29/514 (5%)
Query: 60 LLTHHSLALGFFNW-ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLD 118
L +H LG+ A + N+ +Y ++++ ++ + V + I D
Sbjct: 272 LCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPD 331
Query: 119 SSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFD 178
+Y +I + + N +A ++ N++ N I +S+L L G + F
Sbjct: 332 GYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFK 391
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
E G+ + + + + C+ K+ + + +L+E++ R S+ V +I G+C
Sbjct: 392 EFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSL--DVVHYTTLIAGYCL 449
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
++ +A + +E++ R +PD + Y I+ F G E +L G+ P +
Sbjct: 450 QGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSAT 509
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL---NALI-GSVSSIDPRSAIVFFN 354
+ I GL + ++ EA+ T++D L +A++ G + R A F+
Sbjct: 510 HNRIIEGLCMAGKVKEAEAFLN-------TLEDKCLENYSAMVDGYCKANFTRKAYELFS 562
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
+ ++G + + L +LC + D+ + + + + A D + Y ++ C G
Sbjct: 563 RLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDG 622
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
++ A V + +G+ PDV Y ++ CR + LR A+ +++ M G ++ TY
Sbjct: 623 DMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYT 682
Query: 475 ILISKFSEVG---------------EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+++ S+V E A + M E G+ PD YT L++ C+
Sbjct: 683 VVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTN 742
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
NLQ A ++++ + + + + S C R
Sbjct: 743 NLQDAINLYDEMIARGLQPDIVTYTALLSSCCSR 776
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/461 (22%), Positives = 199/461 (43%), Gaps = 44/461 (9%)
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
SIL+ L + + K+ + + I LD +Y ++ +L + ++A + NE+K
Sbjct: 372 SILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGR 431
Query: 149 CEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV 208
+ +L+A G + +A MF+EM RG+E + + + + F N +
Sbjct: 432 RMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEA 491
Query: 209 LSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR-----------EC 257
L +LD + + + S II G C +V+EA L+ L + C
Sbjct: 492 LELLDCIGTQ--GLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYC 549
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
K +F + ++L + ++ +++KKK + E+ LI+ R+
Sbjct: 550 KANF-----TRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDV 604
Query: 318 LGEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
I+ GK LIG+ D + A + F+ ++E+G P + T + + C
Sbjct: 605 EPNQIMYGK----------LIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYC 654
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMV------------SFLCTSGRLRE---AYG 421
+ N E +++ + D+ +Y V++ S + G E A
Sbjct: 655 RVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASP 714
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
EMK G+ PDV Y L+++ C+ + L+ A L+D+M A G ++ TY L+S
Sbjct: 715 FWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCC 774
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G+++ A+ L + M KG+ PD+ + L G+ + +Q
Sbjct: 775 SRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARKVQ 815
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F M E G P T S + LC +SD E + L A ++ D +Y ++
Sbjct: 246 AVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIR 305
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C+ +L+EA V +M +G+ PD Y +L+ A C+ L A L + M ++G
Sbjct: 306 GFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKT 365
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N + ++ E+G + F + G+ D Y +++ LC+ ++ A E+
Sbjct: 366 NCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELL 425
Query: 529 NKSVNHDVMLARSILSTFMISLC 551
N+ + L +T + C
Sbjct: 426 NEMKGRRMSLDVVHYTTLIAGYC 448
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
N L+++ E G+I+ A+ ++ ++ G+ P+ TY ++ LC++ N + A +VF +
Sbjct: 196 NFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEE 255
Query: 534 HDVMLARSILSTFMISLC 551
V ST++ LC
Sbjct: 256 AGVNPNAVTCSTYIEGLC 273
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 125/542 (23%), Positives = 224/542 (41%), Gaps = 37/542 (6%)
Query: 3 MRPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVIN--PYL 60
M P T IS + + P + L++ L SL+P+ + +IN P+
Sbjct: 27 MTPPTSHCHDPILTTISEAIKVSPTKPLHSSLKRIL------PSLTPNHLIDLINLNPHS 80
Query: 61 LTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS 120
L+ SL L FF W S Q +F S SY ++ L + ++ S+L+ V K +S
Sbjct: 81 LSPPSL-LSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSAS 139
Query: 121 VYRFIIPSLIQGKNTQKA---FSV-----------------FNEVKFNCEDIGPEICNSL 160
+ S+++ + T ++ FSV F V+ + I C L
Sbjct: 140 S---VFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYL 196
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
L A ++E+ G F V + + C+ K+ + + E+ KR
Sbjct: 197 FDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG- 255
Query: 221 SMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+ +V++ +I+G+CK +++ F++ + PD Y ++ G + +
Sbjct: 256 --LRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDD 313
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+ + G+ P + I G V R E+ + ++ D N LI
Sbjct: 314 ANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLIN 373
Query: 340 SVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
+ + D R A M ++G P T + L CK + +E+ K +
Sbjct: 374 GLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIEL 433
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D ++ ++S C G++ EA ++EM G+ PD + Y ++ C++ ++ KL
Sbjct: 434 DNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLL 493
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M G + TYN+L++ + G+++ A L ML GV PD TY LLEG C+
Sbjct: 494 KEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKH 553
Query: 519 TN 520
N
Sbjct: 554 GN 555
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 6/207 (2%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A + F + ++G PT+ + + L CK D+ + + + N F D+ +Y+V+++
Sbjct: 244 AQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLIN 303
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC---REDLLRPAKKLWDQMFASG 465
LC G+L +A + EM +GL P+ + +L+ C R DL +++ QM G
Sbjct: 304 GLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADL---GMEIYQQMLRKG 360
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
++ TYN LI+ +VG++ A +L M ++G+ PD TYT L++G C+E +L++A
Sbjct: 361 VKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESAL 420
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCR 552
E+ + V + L + + CR
Sbjct: 421 EIRKEMVKEGIELDNVAFTALISGFCR 447
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 87/178 (48%)
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
L K N + Y+ + Y D+ +NV++ LC ++ EA + E+ ++GL P
Sbjct: 200 LMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPT 259
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V +N+L+ C+ L +L M + ++ TY++LI+ + G+++ A +LF
Sbjct: 260 VVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFL 319
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M ++G+ P+ T+T+L+ G C E++ + + V +T + LC+
Sbjct: 320 EMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCK 377
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 76/197 (38%), Gaps = 53/197 (26%)
Query: 384 LVEVYKVLSANDYFT-DMESYNVMVSFLCTSGRLREAYGVIQ-EMKRKGLDPDVSFYNS- 440
L+ +K LS +F + SY M FLCT L EA ++Q + RKG + S + S
Sbjct: 86 LLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSV 145
Query: 441 ---------------LMEA------------CCRE-----------------------DL 450
LM A C R +L
Sbjct: 146 LEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNL 205
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
PA ++++ G ++ +N+L+ + + +I A LF + ++G+ P ++ +
Sbjct: 206 TSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNT 265
Query: 511 LLEGLCQETNLQAAFEV 527
L+ G C+ NL F +
Sbjct: 266 LINGYCKSGNLDQGFRL 282
>gi|255580313|ref|XP_002530985.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529437|gb|EEF31397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 753
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 120/543 (22%), Positives = 243/543 (44%), Gaps = 25/543 (4%)
Query: 22 NRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFT 81
+R R WT L+ ++ L SLV V++ + H AL FF W + F
Sbjct: 84 SRMMANRPWTTRLQNSIRNL--VPHFDHSLVYNVLHAARNSEH--ALQFFRWVERAGLFK 139
Query: 82 HSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSV 141
+ ++ I++ L + ++N +L + + D ++ +I S + Q+A +
Sbjct: 140 NDRDTHMKIIEILGRASKLNHARCILLDMPKKGVEWDEYMFVVLIESYGKAGIVQEAVKI 199
Query: 142 FNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
FN++ + + ++L V+ G A ++F++M + G++ + + + +W F
Sbjct: 200 FNKMNELGVERSIKSYDALFKVILRRGRYMMAKRVFNKMLNDGIQPTRHTYNIMLWGFFL 259
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ +L + D+++ R I+ V+ +I+GF + K++EEA K+ E++ + P
Sbjct: 260 SLRLETAMRFYDDMKNRG---ISPDVVTYNTMINGFYRFKKMEEAEKLFVEMKGKNIAPT 316
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
I+Y + + + + V + +L++ + + P + Y + GL ++ EAK++
Sbjct: 317 VISYTTMIKGYVAVDRVDDGLRLLEEMKSFNIKPNVHTYSTLLPGLCDAWKMTEAKDILI 376
Query: 321 VIVSGKFTIDDD--VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT-LSTLSNLSKNLCK 377
+V+ D+ L L + D R+A N M+ + +PT L +N CK
Sbjct: 377 EMVARHLAPKDNSIFLRLLSCQCKAGDLRAAEDVLNTMM-RLHIPTEAGHYGVLIENFCK 435
Query: 378 RNKSDELVEVYKVLSANDYFTDMES--------YNVMVSFLCTSGRLREAYGVIQEMKRK 429
+ D V+ L + +S YN M+ +LC+ G+ +A +++ +K
Sbjct: 436 AEEYDRAVKYLDKLIEKEIILRPQSTLEIESNAYNPMIQYLCSHGQTGKAEIFFRQLMKK 495
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
G+ ++F N+L+ +E A +++ M G + Y ++I + GE A
Sbjct: 496 GVQDPLAF-NNLICGHAKEGYPDSAFEIFKIMGKRGVPRDADAYRLIIESYLRKGEPADA 554
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN----KSVNHDVMLARSILST 545
MLE G PD + + S++E L ++ +Q A V K V ++ L IL
Sbjct: 555 KTALDGMLEDGHVPDPSVFRSVMESLFEDGRVQTASRVMKSMVEKGVKENMDLVGKILEA 614
Query: 546 FMI 548
++
Sbjct: 615 LLM 617
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 91/484 (18%), Positives = 188/484 (38%), Gaps = 51/484 (10%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+ +L LS ++ +K I+ D Y +I + K ++A +F E+
Sbjct: 249 TYNIMLWGFFLSLRLETAMRFYDDMKNRGISPDVVTYNTMINGFYRFKKMEEAEKLFVEM 308
Query: 146 KFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
K ++I P + + +++ + +D+ L++ +EM ++ + + + C+
Sbjct: 309 K--GKNIAPTVISYTTMIKGYVAVDRVDDGLRLLEEMKSFNIKPNVHTYSTLLPGLCDAW 366
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLI------------------------------- 232
K+ + +L E+ R + + S+ L+
Sbjct: 367 KMTEAKDILIEMVARHLAPKDNSIFLRLLSCQCKAGDLRAAEDVLNTMMRLHIPTEAGHY 426
Query: 233 ---IHGFCKGKRVEEAFKVLDELRIREC--KPDFI------AYRIVAEEFKLMGSVFERE 281
I FCK + + A K LD+L +E +P AY + + G + E
Sbjct: 427 GVLIENFCKAEEYDRAVKYLDKLIEKEIILRPQSTLEIESNAYNPMIQYLCSHGQTGKAE 486
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS- 340
+ ++ K GV + I G E A E+ +++ D D +I S
Sbjct: 487 IFFRQLMKKGVQDPLA-FNNLICGHAKEGYPDSAFEIFKIMGKRGVPRDADAYRLIIESY 545
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ +P A + M+E G VP S ++ ++L + + V K + +M
Sbjct: 546 LRKGEPADAKTALDGMLEDGHVPDPSVFRSVMESLFEDGRVQTASRVMKSMVEKGVKENM 605
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+ ++ L G + EA G I+ + + G + ++ L+ + A KL D
Sbjct: 606 DLVGKILEALLMRGHVEEALGRIELLMQSGFHVN---FDDLLSVLSEKGKTIAALKLLDF 662
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
+ + K+Y+ ++ G+ A + +++KG D ++ L++ L QE N
Sbjct: 663 ALERDFNLDFKSYDKVLDALLAAGKTLNAYSILCKIMQKGGVSDWSSSKDLIKSLNQEGN 722
Query: 521 LQAA 524
+ A
Sbjct: 723 TKQA 726
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 123/512 (24%), Positives = 216/512 (42%), Gaps = 42/512 (8%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ F S S + +L++L SR +V V + D+ Y + + + K+
Sbjct: 114 RKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDL 173
Query: 136 QKAFSVFNE-VKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
K F + VK + +GP + N +L L I +A K+FDEM R + +T+ +
Sbjct: 174 DKGFELMKSMVK---DGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTY 230
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
I +C+ + + L + R +E ++ V +++G C RV++A +VL E+
Sbjct: 231 NTLIDGYCKVGGIEEALGFKE--RMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEM 288
Query: 253 RI----------------------------RECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+E + D Y I+ +G + + E VL
Sbjct: 289 EGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVL 348
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS-VSS 343
K + GV P Y + E + +A E + + N +I +
Sbjct: 349 AKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCET 408
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ A + M+EKG PT+ T ++L ++ E + ++ SY
Sbjct: 409 GEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISY 468
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+++ LC +L +A V+ +M +G+ P+ YN L+EA C L+ A + +D+M
Sbjct: 469 GSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQ 528
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
SG L TYN LI+ G ++ A LF M KG PD TY SL+ G + N Q
Sbjct: 529 SGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQK 588
Query: 524 AFEVFNKSVNHDVMLARSILSTF--MISLCRR 553
E+++K ++ + + TF +I CR+
Sbjct: 589 CLELYDK---MKILGIKPTVGTFHPLIYACRK 617
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 150/360 (41%), Gaps = 34/360 (9%)
Query: 205 LGQVLSMLDEVRK-----RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
L V MLDE R++ + + ++ + E+ V ++ +P
Sbjct: 96 LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRP 155
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D +AY + ++ + + ++K K G+ P Y + GL RRI +A++L
Sbjct: 156 DAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLF 215
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ ++ + N LI + A+ F M E+ L T ++L LC
Sbjct: 216 DEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGS 275
Query: 379 NKSDELVEVYKVLSANDYF----------------------------TDMESYNVMVSFL 410
+ D+ EV + + + D +Y ++++ L
Sbjct: 276 GRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGL 335
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C GR+ +A V+ ++ G+ P YN L+ A C+E ++ A +QM G N
Sbjct: 336 CRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNR 395
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
T+N +ISKF E GE++ A M+EKGV+P TY SL+ G Q+ + FE ++
Sbjct: 396 ITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDE 455
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 191/443 (43%), Gaps = 10/443 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +L L +I + VL ++ N +T Y ++ + Q + +KA ++
Sbjct: 327 TYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQM 386
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + N++++ G +D+A M +GV + + I + +
Sbjct: 387 EERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHF 446
Query: 206 GQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+ LDE+ K + N + GS+I L CK +++ +A VL ++ R P+
Sbjct: 447 VRCFEFLDEMDKAGIKPNVISYGSLINCL-----CKDRKLIDAEIVLADMIGRGVSPNAE 501
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y ++ E + + + + + G+ Y I GL R+ +A++L +
Sbjct: 502 IYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQM 561
Query: 323 VSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
D N+LI G S++ + + ++ M G PT+ T L C++
Sbjct: 562 AGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIY-ACRKEGV 620
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+ ++++ + D D YN M+ G + +A + Q+M +G+D D YNSL
Sbjct: 621 VTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSL 680
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ A R+ + K L D M A G + TYNILI ++ + GA + M+E+G+
Sbjct: 681 ILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGL 740
Query: 502 APDATTYTSLLEGLCQETNLQAA 524
+ + L+ GL +E L+ A
Sbjct: 741 LLNVSMCYQLISGLREEGMLREA 763
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 106/511 (20%), Positives = 205/511 (40%), Gaps = 56/511 (10%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S +Y+ +L L R+I + ++ + ++ Y +I + ++A
Sbjct: 191 SVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFK 250
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+K + NSLL L G +D+A ++ EM G F GF F++ N
Sbjct: 251 ERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSG--FLPGGFLSFVFDDHSN 308
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L E+R E + ++++G C+ R+E+A +VL +L P I
Sbjct: 309 GAGDDGLFDGKEIRIDERTY-------CILLNGLCRVGRIEKAEEVLAKLVENGVTPSKI 361
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV- 321
+Y I+ + G V + + ++ + G+ P + I + CE E+
Sbjct: 362 SYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVI------SKFCETGEVDHAE 415
Query: 322 -----IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+V + + N+LI G F + M + G P + + +L L
Sbjct: 416 TWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCL 475
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
CK K + V + + E YN+++ C+ +L++A+ EM + G+D +
Sbjct: 476 CKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATL 535
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE------------- 482
YN+L+ R ++ A+ L+ QM GC+ ++ TYN LIS +++
Sbjct: 536 VTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDK 595
Query: 483 ---------VGEI---------EGAL---RLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
VG EG + ++F ML+ + PD Y ++ ++ N+
Sbjct: 596 MKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNV 655
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A + + V+ V + ++ +++ R
Sbjct: 656 MKAMSLHQQMVDQGVDCDKVTYNSLILAYLR 686
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 106/544 (19%), Positives = 220/544 (40%), Gaps = 59/544 (10%)
Query: 47 LSPSLVARVINPYLLTHHSL------------ALGFFNWASQQPNFTHSPLSYHSILKSL 94
L ++ R + P +T+++L ALGF +Q N + ++Y+S+L L
Sbjct: 214 LFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQ-NVECNLVTYNSLLNGL 272
Query: 95 SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGP 154
S +++ VL +++ + L F+ G F E++ I
Sbjct: 273 CGSGRVDDAREVLLEMEGSGF-LPGGFLSFVFDDHSNGAGDDGLFD-GKEIR-----IDE 325
Query: 155 EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
LL L G I+ A ++ ++ GV S I + + + +C+ + + + ++
Sbjct: 326 RTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQ 385
Query: 215 VRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+ +R + + +I FC+ V+ A + + + P Y + +
Sbjct: 386 MEER--GLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQK 443
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G L + K G+ P Y I L +R++ +A+ + ++ + + ++
Sbjct: 444 GHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIY 503
Query: 335 NALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N LI + S+ + A FF+ MI+ G TL T + L L + + + +++ ++
Sbjct: 504 NMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAG 563
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
D+ +YN ++S S ++ + +MK G+ P V ++ L+ AC +E ++
Sbjct: 564 KGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVV-T 622
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL- 512
K++ +M + YN +I ++E G + A+ L M+++GV D TY SL+
Sbjct: 623 MDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLIL 682
Query: 513 ----------------------------------EGLCQETNLQAAFEVFNKSVNHDVML 538
+GLC + A+ + + V ++L
Sbjct: 683 AYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLL 742
Query: 539 ARSI 542
S+
Sbjct: 743 NVSM 746
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/389 (19%), Positives = 160/389 (41%), Gaps = 18/389 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+++++++ + +++ ++ ++++ ++ Y +I Q + + F +E
Sbjct: 396 ITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDE 455
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ + I P + + SL+ L D + +A + +M RGV + + + I C
Sbjct: 456 M--DKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSL 513
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLI-----IHGFCKGKRVEEAFKVLDELRIREC 257
+KL DE MI + A L+ I+G + RV++A + ++ + C
Sbjct: 514 SKLKDAFRFFDE-------MIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGC 566
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
PD I Y + + + + + K + LG+ P + I E + K
Sbjct: 567 NPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKM 626
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
E++ D V N +I S + + A+ M+++G T ++L
Sbjct: 627 FQEML-QMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYL 685
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+ + E+ + + A +++YN+++ LC AY +EM +GL +VS
Sbjct: 686 RDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVS 745
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASG 465
L+ E +LR A+ + ++ G
Sbjct: 746 MCYQLISGLREEGMLREAQIVSSELSIGG 774
>gi|225440005|ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
[Vitis vinifera]
Length = 763
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 129/554 (23%), Positives = 246/554 (44%), Gaps = 49/554 (8%)
Query: 23 RTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTH 82
R R WT L+ ++ L SLV V++ + H AL FF W + F H
Sbjct: 95 RMMANRAWTTRLQNSIRSL--VPQFDHSLVWNVLHGSRNSDH--ALQFFRWVERAGLFRH 150
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
++ I++ L + ++N +L + + D ++ +I S + Q++ VF
Sbjct: 151 DRDTHLKIIEILGRASKLNHARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVF 210
Query: 143 NEVKFNCEDIGPEIC----NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
++K ++G E ++L V+ G A + F+ M + GV + + + IW
Sbjct: 211 QKMK----ELGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWG 266
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIREC 257
F + K+ +E+++R I+ V+ +I+G+ + K++EEA K E++ R
Sbjct: 267 FFLSLKVETANRFFEEMKERR---ISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNI 323
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-- 315
+P I+Y + + + +G V + + ++ + G+ P Y + GL ++ EA
Sbjct: 324 EPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQN 383
Query: 316 --KELGEVIVSGKFTIDDDVLNALI------GSV-SSIDPRSAIVFFNFMIEKGRVPTLS 366
KE+ E ++ K D+ + LI G + ++ D A++ + E G L
Sbjct: 384 VVKEMVERYIAPK---DNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLI 440
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFT------DMES--YNVMVSFLCTSGRLRE 418
+N CK D V++ L + +MES YN+++ +LC SG+ +
Sbjct: 441 ------ENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSK 494
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A + +++ +KG+ ++F N+L+ +E A ++ M Y +LI
Sbjct: 495 AETLFRQLMKKGVQDPIAF-NNLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIE 553
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN----KSVNH 534
F + GE A M+E G PD++ + S++E L ++ +Q A V N K V
Sbjct: 554 SFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKE 613
Query: 535 DVMLARSILSTFMI 548
++ L IL ++
Sbjct: 614 NMDLVAKILEALLL 627
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 90/455 (19%), Positives = 178/455 (39%), Gaps = 70/455 (15%)
Query: 54 RVINPYLLTHHSLALGFFNWASQQP-----------NFTHSPLSYHSILKSLSLSRQINA 102
R I+P ++T++++ G++ + N + +SY +++K +++
Sbjct: 286 RRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDD 345
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE---ICNS 159
+ +++K I ++ Y ++P L G+ +A +V E+ I P+ I
Sbjct: 346 GLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERY--IAPKDNSIFMR 403
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ G +D A + M + +GV I FC++ + + +LD++ ++E
Sbjct: 404 LITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKE 463
Query: 220 ------NSMINGSVIAVLIIHGFCKGKRV------------------------------- 242
NS+ S LII C +
Sbjct: 464 IILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQDPIAFNNLIRGHSKE 523
Query: 243 ---EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
E AF++L + RE + AYR++ E F G + + L + G P ++ +
Sbjct: 524 GAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLF 583
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDD----VLNALI--GSVSSIDPRSAIVFF 353
R + L + RI A + +V + D +L AL+ G V A+
Sbjct: 584 RSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEE-----ALGRI 638
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
+ ++ G P L ++ LC + K+ +++ DY SY ++ L T+
Sbjct: 639 DLLMNNGCEPDFDGLLSV---LCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTA 695
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
G+ AY ++ ++ +KG D S L+ + E
Sbjct: 696 GKTLNAYSILCKIMQKGGATDWSSCKDLIRSLNEE 730
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/169 (19%), Positives = 73/169 (43%)
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E V+V++ + ++SY+ + + GR A M +G+ P YN ++
Sbjct: 205 ESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMI 264
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+ A + +++M S ++ TYN +I+ + + ++E A + F M + +
Sbjct: 265 WGFFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIE 324
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
P +YT++++G + +F + + + ST + LC
Sbjct: 325 PTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLC 373
>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 102/479 (21%), Positives = 204/479 (42%), Gaps = 37/479 (7%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
Q + S ++ + +L+ S I+ ++V ++ V + DSS ++ ++ +
Sbjct: 197 QNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKI 256
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
Q+A + + C +L+ L +G ++ A+ F +M G + + I F
Sbjct: 257 QEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSL 316
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RI 254
I C+ + Q ML+E+ + N +I G CK E+AF++ +L R
Sbjct: 317 IDGLCKKGSIKQAFEMLEEMVR--NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 374
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
KP+ Y + + + E++ + ++ G+ P N Y I G C+
Sbjct: 375 DIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGH------CK 428
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
A G F A N M ++G P + T + + +
Sbjct: 429 A---------GNFD-------------------RAYELMNLMDDEGFRPNIYTYNAVIDS 460
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK++++ E E+ + D +Y +++ C +++A M + G + D
Sbjct: 461 LCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEAD 520
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+ N L+ A CR+ ++ +++L+ + + G +TY +IS + + G+ + AL+ FH
Sbjct: 521 MRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFH 580
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
NM G PD+ TY SL+ GLC+++ + A +++ ++ + T C+R
Sbjct: 581 NMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKR 639
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/458 (22%), Positives = 195/458 (42%), Gaps = 24/458 (5%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG------------------PE--ICNSL 160
+Y SLI N QKA V + N +IG P N +
Sbjct: 152 LYLVTADSLIANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCV 211
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
L + G ID A +FDEMS RGV + F + + + K+ + L + +R
Sbjct: 212 LEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQR-- 269
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
I + LI+ C+ V A ++ KP+ I + + + GS+ +
Sbjct: 270 GFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQA 329
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG-EVIVSGKFTIDDDVLNALIG 339
+L++ + G P + I GL +A L +++ S + + ++IG
Sbjct: 330 FEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIG 389
Query: 340 SVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
D A + F+ M E+G P ++T + L CK D E+ ++ +
Sbjct: 390 GYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRP 449
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
++ +YN ++ LC R EAY ++ + GL+ D Y L++ C++ ++ A +
Sbjct: 450 NIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFF 509
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M +G +++ NILI+ F +++ + RLF ++ G+ P TYTS++ G C+E
Sbjct: 510 CRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKE 569
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+ A + F+ H + + + LC++ ++
Sbjct: 570 GDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMV 607
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 112/490 (22%), Positives = 218/490 (44%), Gaps = 36/490 (7%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
F + +++ +LK L + + S+L++++ N + D Y +I +GK +KA
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKAL 197
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+ NE+K + L+ G +D A+ EM G+E + + I F
Sbjct: 198 ELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGF 257
Query: 200 CENAKLGQVLSMLDEVRKRE--------NSMING-----------SVIAVLI-------- 232
C+ +L + ++ DEV +R N++I G + +I
Sbjct: 258 CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNV 317
Query: 233 ------IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
I G C + +EA ++L+ + ++ +P+ + Y I+ + G V + +++
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVEL 377
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALI-GSVSS 343
+K P Y + GL + + EA +L +++ D DV+ NALI G
Sbjct: 378 MKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKE 437
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
A+ ++ ++EK T + L + K ++ +E++K +S + + ++Y
Sbjct: 438 NRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY 497
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
M+ C +G L A G++ +M+ L P V YN L+ + C+E L A +L+++M
Sbjct: 498 TAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQR 557
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
++ ++NI+I + G+I+ A L M G++PD TY+ L+ + L
Sbjct: 558 DNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDE 617
Query: 524 AFEVFNKSVN 533
A F+K V+
Sbjct: 618 AISFFDKMVD 627
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 175/389 (44%), Gaps = 52/389 (13%)
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M RG F+ + + C N + G+ +S+L E+R+ NS++ +I GFC+G
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRR--NSLMPDVFSYNTVIRGFCEG 190
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
K +E+A ++ +E++ C + + I+ + F G + E LK+ + +G+ Y
Sbjct: 191 KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVY 250
Query: 300 REFILGLIVERRICEAKEL--GEVIVSGKFTIDDD----VLNALIGSVSSIDP-RSAIVF 352
I G C+ EL G+ + D N LI + + A
Sbjct: 251 TSLIRGF------CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F FMIE+G P + T + L LC K+ E +++ ++ D + +YN++++ LC
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 413 SGRLREAYGVIQEMKRK--------------GL-----------------------DPDV 435
G + +A +++ MK++ GL DPDV
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDV 424
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YN+L+ C+E+ L A ++D + +G+ T NIL++ + G++ A+ L+
Sbjct: 425 ISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAA 524
+ + + ++ TYT++++G C+ L A
Sbjct: 485 ISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 102/199 (51%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
L G +++ A+ M +P + + + + + C+ + ++ +E+ + +
Sbjct: 149 LKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC 208
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ ++ +++ C +G++ EA G ++EMK GL+ D+ Y SL+ C L K
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKA 268
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L+D++ G S TYN LI F ++G+++ A +F M+E+GV P+ TYT L++GLC
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 517 QETNLQAAFEVFNKSVNHD 535
+ A ++ N + D
Sbjct: 329 GVGKTKEALQLLNLMIEKD 347
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 103/509 (20%), Positives = 208/509 (40%), Gaps = 75/509 (14%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
+ S +++ ++ + + +++ LK++K + D VY +I + +
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKA 268
Query: 141 VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+F+EV + N+L+ G + A ++F+ M RGV + + I C
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
K + L +L+ + +++ +V +II+ CK V +A ++++ ++ R +PD
Sbjct: 329 GVGKTKEALQLLNLMIEKDEE--PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD 386
Query: 261 FIAYRIVAEEFKLMGSVFE--REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
I Y I+ G + E + + L K P Y I GL E R+ +A ++
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDI 446
Query: 319 GEVIVSGKFTIDDDVLNALIGS----------------------VSSIDPRSAIV----- 351
+++V D N L+ S V + D +A++
Sbjct: 447 YDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCK 506
Query: 352 --FFNF---MIEKGRV----PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
N ++ K RV P++ + L +LCK D+ +++ + ++ F D+ S
Sbjct: 507 TGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVS 566
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+N+M+ +G ++ A ++ M R GL PD+ Y+
Sbjct: 567 FNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSK---------------------- 604
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
LI++F ++G ++ A+ F M++ G PDA S+L+ +
Sbjct: 605 -------------LINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETD 651
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLC 551
E+ K V+ D++L + + T M +C
Sbjct: 652 KLTELVKKLVDKDIVLDKELTCTVMDYMC 680
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 95/196 (48%)
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
N + V S + A F+ M+E +LS L + + K+ V ++
Sbjct: 77 NLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKR 136
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ ++ ++N+++ LC + +A +++EM+R L PDV YN+++ C L A
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+L ++M SGCS +L T+ ILI F + G+++ A+ M G+ D YTSL+ G
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 515 LCQETNLQAAFEVFNK 530
C L +F++
Sbjct: 257 FCDCGELDRGKALFDE 272
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%)
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+++G + + L K LC+ + + V + + + N D+ SYN ++ C
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
L +A + EMK G + + L++A C+ + A +M G +L Y
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
LI F + GE++ LF +LE+G +P A TY +L+ G C+ L+ A E+F
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 126/546 (23%), Positives = 227/546 (41%), Gaps = 95/546 (17%)
Query: 3 MRPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVIN--PYL 60
M P T IS + + P + L++ L SL+P+ + +IN P+
Sbjct: 27 MTPPTSHCHDPILTTISEAIKVSPTKPLHSSLKRIL------PSLTPNHLIDLINLNPHS 80
Query: 61 LTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS 120
L+ SL L FF W S Q +F S SY ++ L + ++ S+L+ V K +S
Sbjct: 81 LSPPSL-LSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSAS 139
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
+ S+++ + T ++ VF+ L+ GY +A++ F +
Sbjct: 140 S---VFTSVLEARGTHQSNLVFS---------------VLMNAYTDSGYFSDAIQCFRLV 181
Query: 181 SHRGVE--FSTIGFGVF-----------IWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
++ F + G+ +F W F E +LD + N
Sbjct: 182 RKHNLQIPFHSCGY-LFDRLMKLNLTSPAWAFYE--------EILDCGYPPDVCKFN--- 229
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV---FEREVVL 284
+++H CK ++ EA + E+ R +P +++ + + G++ F + +
Sbjct: 230 ---VLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFM 286
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
+ R V P Y I GL E ++ +A +L
Sbjct: 287 MENR---VFPDVFTYSVLINGLCKEGQLDDANKL-------------------------- 317
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
F M ++G VP T + L C ++D +E+Y+ + D+ +YN
Sbjct: 318 --------FLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYN 369
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
+++ LC G LREA ++ EM ++GL PD Y L++ CC+E L A ++ +M
Sbjct: 370 TLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKE 429
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G + + LIS F G++ A R MLE G+ PD TYT ++ G C++ +++
Sbjct: 430 GIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTG 489
Query: 525 FEVFNK 530
F++ +
Sbjct: 490 FKLLKE 495
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 6/207 (2%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A + F + ++G PT+ + + L CK D+ + + + N F D+ +Y+V+++
Sbjct: 244 AQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLIN 303
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC---REDLLRPAKKLWDQMFASG 465
LC G+L +A + EM +GL P+ + +L+ C R DL +++ QM G
Sbjct: 304 GLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADL---GMEIYQQMLRKG 360
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
++ TYN LI+ +VG++ A +L M ++G+ PD TYT L++G C+E +L++A
Sbjct: 361 VKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESAL 420
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCR 552
E+ + V + L + + CR
Sbjct: 421 EIRKEMVKEGIELDNVAFTALISGFCR 447
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 87/178 (48%)
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
L K N + Y+ + Y D+ +NV++ LC ++ EA + E+ ++GL P
Sbjct: 200 LMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPT 259
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V +N+L+ C+ L +L M + ++ TY++LI+ + G+++ A +LF
Sbjct: 260 VVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFL 319
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M ++G+ P+ T+T+L+ G C E++ + + V +T + LC+
Sbjct: 320 EMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCK 377
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 114/498 (22%), Positives = 217/498 (43%), Gaps = 18/498 (3%)
Query: 63 HHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS 120
HH A S +P+ P +SY ++++L R + +L+ ++ + D
Sbjct: 92 HHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVV 151
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCED-IGPEIC--NSLLAVLASDGYIDNALKMF 177
Y +I L KA + E+ CE I P + +SLL G ++ K+F
Sbjct: 152 TYGTLIRGLCDAAEVDKAVELMGEM---CESGIEPNVVVYSSLLQGYCKSGRWEDVGKVF 208
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR--ENSMINGSVIAVLIIHG 235
EMS +G+E + + I C+ K + ++D + +R E +++ +V+ I+
Sbjct: 209 VEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVL----INC 264
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK--KRKLGVA 293
CK V+EA VL ++ + PD + Y + + + + E +L++ + K V
Sbjct: 265 MCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVK 324
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVF 352
P + I GL R+ +A ++ ++ ++ N LIG + + R A+
Sbjct: 325 PNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMEL 384
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
+ M G P T S L K CK + D ++ + ++ Y ++ +C
Sbjct: 385 MDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCE 444
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G + A + EM DV Y++++ C+ L+ AK+L + G + + T
Sbjct: 445 QGMMERARNLFNEMDNN-FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVT 503
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
Y+I+I+ F++ G++E A + M G PD + SL++G + + E+ + +
Sbjct: 504 YSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMI 563
Query: 533 NHDVMLARSILSTFMISL 550
++ L I+ST SL
Sbjct: 564 TKNIALDSKIISTLSTSL 581
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 11/176 (6%)
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK---RKGLDPDVSFYNS 440
L E +L A D SYN +++ LC G A +++ M P+ Y
Sbjct: 61 LGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTV 120
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
LM A C + L A L M ++G ++ TY LI + E++ A+ L M E G
Sbjct: 121 LMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG 180
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSILSTFMISLCR 552
+ P+ Y+SLL+G C+ + +VF K + DV++ ++ SLC+
Sbjct: 181 IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLID----SLCK 232
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 153/378 (40%), Gaps = 59/378 (15%)
Query: 51 LVARVINPYLLTHHSL------------ALGFFNWASQQPNFTHSPLSYHSILKSLSLSR 98
+V R + P ++T++ L A+G S++ ++Y++++K LS
Sbjct: 246 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEK-GVAPDVVTYNTLIKGLSDVL 304
Query: 99 QINAIDSVLKQVKVNKITLDSSVYRF--IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI 156
+++ +L+++ K + +V F +I L ++AF +V+ E+ G +
Sbjct: 305 EMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAF----QVRAMMEETGCMV 360
Query: 157 ----CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML 212
N L+ L + A+++ DEM+ G+E + + + I FC+ ++ + +L
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLL 420
Query: 213 DEVRKRE----------------------------NSMINGSVIAVL----IIHGFCKGK 240
+R R N M N + V+ +IHG CK
Sbjct: 421 STMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAG 480
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
++ A ++L + PD + Y IV F G + VLK+ G P +
Sbjct: 481 DLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFD 540
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVF----FNFM 356
I G + I + EL +++ +D +++ L S+ + + A++ F+
Sbjct: 541 SLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPDFSAE 600
Query: 357 IEKGRVPTLSTLSNLSKN 374
I KG + + L + N
Sbjct: 601 ISKGNINSPQELMKVLHN 618
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 143/302 (47%), Gaps = 2/302 (0%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I F + +R ++A + ++ + CKPD + I+ + G + V + +
Sbjct: 159 ILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAM 218
Query: 291 G-VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRS 348
G V P + + L+ +R+ EA+E+ + F D N +I G + +
Sbjct: 219 GFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQE 278
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ + M+ K VPT T L +LCK + E+++V++A+ + + Y ++
Sbjct: 279 ALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIH 338
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
SGR++EA + EM G PDV + +++ C+ A K +++M GC
Sbjct: 339 GFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKP 398
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ TY +I S++G + A R+ M+ G PD+ TY LL+G C+ L A ++
Sbjct: 399 NVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLL 458
Query: 529 NK 530
++
Sbjct: 459 DE 460
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 109/498 (21%), Positives = 194/498 (38%), Gaps = 42/498 (8%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ F ++Y++++ L+ + VL + Y ++ SL +
Sbjct: 252 EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTL 311
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
++A +F + + I SL+ A G + A +FDEM G I V
Sbjct: 312 ERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVM 371
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
I C++ Q +E+ + V II G K RV AF+++ +
Sbjct: 372 IDGLCKSGNFEQAAKSFEEMMR--GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAH 429
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF------------- 302
C PD + Y + + F +G + E +L + K +P Y
Sbjct: 430 GCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKT 489
Query: 303 -----------------------ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
I+GL R+ EA + + +VS D N LI
Sbjct: 490 LDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILIN 549
Query: 339 GSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
G S + R A + + + G +P T + L LCK + D V++ + S+ +
Sbjct: 550 GLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGW 609
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ +Y + + LC G++ A + QEM R+G PD + Y ++ + L A K
Sbjct: 610 NADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACK 669
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG-VAPDATTYTSLLEGL 515
+D+M G + TY L+ G ++ A F +ML +G + Y +L+ G
Sbjct: 670 FFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGF 729
Query: 516 CQETNLQAAFEVFNKSVN 533
C+ + AA ++F ++
Sbjct: 730 CKALKVDAALKLFEDMIS 747
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 122/532 (22%), Positives = 216/532 (40%), Gaps = 36/532 (6%)
Query: 43 LRDSLSP-------SLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLS 95
+R+ L P S VA V+ +T A+ FF WA +Q F H +Y+ ++ L
Sbjct: 73 IRNVLGPVHGQVLGSHVAAVLRSLKVT--GTAISFFRWAGEQAGFQHDVFTYNCLMNLLV 130
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN-CEDIGP 154
+ + ++ +++ I ++ + +I S + + A + F +K C+ P
Sbjct: 131 AEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCK---P 187
Query: 155 EICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML 212
++ L+ V L G + A ++F EM G + + AK +V
Sbjct: 188 DLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAK--RVKEAR 245
Query: 213 DEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
+ + E IA +I G K +EA KVLD + + C P + Y I+
Sbjct: 246 EVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSL 305
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
G++ E + + G P + Y I G R+ EA L + +V + D
Sbjct: 306 CKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDV 365
Query: 332 DVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
+I G S + A F M+ G P + T + + + L K + + K
Sbjct: 366 ITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKG 425
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR--- 447
+ A+ F D +Y ++ C GRL EA ++ E+ + P++ Y+SL+ C
Sbjct: 426 MIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGS 485
Query: 448 -----EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+DL +K + + C +I + G ++ A R+F M+ +G
Sbjct: 486 VEKTLDDLFEQSKAAAETLDPGLCCS-------IIVGLCKTGRLDEACRIFQRMVSEGCK 538
Query: 503 PDATTYTSLLEGLC--QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
PDATTY L+ GLC +E ++ AF + + + + I LC+
Sbjct: 539 PDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCK 590
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/440 (20%), Positives = 166/440 (37%), Gaps = 87/440 (19%)
Query: 50 SLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQ 109
S + RV N + + +A G F P+ ++Y +L +++ +L +
Sbjct: 411 SKIGRVANAFRIMKGMIAHGCF------PD----SVTYICLLDGFCKLGRLDEAAQLLDE 460
Query: 110 VKVNKITLDSSVYRFIIPSLIQGKNTQKAFS-VFNEVKFNCEDIGPEICNSLLAVLASDG 168
+ + + +Y ++ L G + +K +F + K E + P +C S++ L G
Sbjct: 461 LDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTG 520
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC---ENAKLGQVLSMLDEVRKRENSMING 225
+D A ++F M G + + + I C EN ++ + ++L ++ K +
Sbjct: 521 RLDEACRIFQRMVSEGCKPDATTYNILINGLCRSREN-RVERAFALLHDLEKV--GYLPD 577
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
+V + G CK V+ A K+L+E R D +AY + G V + +
Sbjct: 578 AVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQ 637
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID 345
+ + G AP Y I GLI +++
Sbjct: 638 EMVRQGGAPDAAAYCCIINGLIKVKKL--------------------------------- 664
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE---------------------- 383
A FF+ MI KG+ PT++T + L + LC DE
Sbjct: 665 -EDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYD 723
Query: 384 -----LVEVYKVLSANDYFTDMESY-NVMVSF--------LCTSGRLREAYGVIQEMKRK 429
+ KV +A F DM S NV + L SG+ +A ++QEM
Sbjct: 724 ALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAG 783
Query: 430 GLDPDVSFYNSLMEACCRED 449
G P + + ++++ + D
Sbjct: 784 GSPPHAATFTAILDGLRKSD 803
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 192/421 (45%), Gaps = 11/421 (2%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
Y ++ S +G Q+ + +E++ N L+ L+ G + A + EM
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
G++ S + I+ + L + LS+ +E+ + S + + I+G CK
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS--FIYGLCKLG 353
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
R+ +A + L ++ PD ++Y + + +G++ + ++ + R + + P Y
Sbjct: 354 RMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYN 413
Query: 301 EFILGLIVERRICEAKELG-EVIVSGKFTIDDDVLNALI---GSVSSIDPRSAIVFFNFM 356
+ GL + + A++L E+I G I D++ I GS A FF+ M
Sbjct: 414 TLLDGLCRQGELEVAQQLKVEMINEG---IAPDIVTYTILVNGSCKMGSLSMAQEFFDEM 470
Query: 357 IEKG-RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
+ +G + + + + + L K + + + + A + D+ YNV+V LC G
Sbjct: 471 LHEGLELDSYAYATRIVGEL-KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGN 529
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L EA ++Q+M G+ PD Y S++ A LR ++++ +M + G + ++ TY +
Sbjct: 530 LEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTV 589
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI + G +E A F M EKG+ P+ TY SL+ GLC+ + A+ F + V
Sbjct: 590 LIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKG 649
Query: 536 V 536
+
Sbjct: 650 I 650
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 132/546 (24%), Positives = 238/546 (43%), Gaps = 55/546 (10%)
Query: 15 QAIISASNRTRPAR----KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGF 70
Q +IS S R +P+ W HQ G + P L RV++ + T +AL
Sbjct: 50 QDVISKSIREKPSNFSNYYWLS------HQFG-PVIVDPDLFVRVLSSFR-TSPRMALRL 101
Query: 71 FNWASQQPNFTHSPLSYHSILKSLS-----------LSRQINA-----IDSVLKQVKVNK 114
F WA QP F S + +IL+ L+ + R INA +D ++ ++
Sbjct: 102 FRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSE 161
Query: 115 IT---LDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGY 169
++ LD ++ + S++ ++ SVF+ K + P++ CN +L +L
Sbjct: 162 VSVKILDLLIWVYSKKSMV-----EQCLSVFD--KMIKSRLSPDVKNCNRILRILRDKDL 214
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+ A++++ M G++ + + + + +C+ K+ Q L +L E+++R V
Sbjct: 215 MSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRR--GCAPNDVTY 272
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE-----REVVL 284
++I+G K E+A ++ E+ K Y + + G + E E+VL
Sbjct: 273 NVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVL 332
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSS 343
K G +P Y FI GL R+ +A + +++ D N LI G
Sbjct: 333 K-----GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRL 387
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT-DMES 402
+ A + F+ + PT+ T + L LC++ + E+ + KV N+ D+ +
Sbjct: 388 GNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGEL-EVAQQLKVEMINEGIAPDIVT 446
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y ++V+ C G L A EM +GL+ D Y + + + A L ++M
Sbjct: 447 YTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEML 506
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
A G +L YN+++ ++G +E A L M+ GV PD TYTS++ + L+
Sbjct: 507 AKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLR 566
Query: 523 AAFEVF 528
E+F
Sbjct: 567 KGREIF 572
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 196/456 (42%), Gaps = 9/456 (1%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+++L S ++ +L +++ + Y +I L + ++A + E
Sbjct: 235 VTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGE 294
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + N L+ + G + AL + +EM +G + + FI+ C+ +
Sbjct: 295 MLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGR 354
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ + L ++ N+++ V +I+G+C+ + +AF + DELR P + Y
Sbjct: 355 MSDAMQQLSDMLA--NNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTY 412
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKL---GVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ + G E EV + K ++ G+AP Y + G + A+E +
Sbjct: 413 NTLLDGLCRQG---ELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDE 469
Query: 322 IVSGKFTIDDDVLNA-LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
++ +D ++G + D A M+ KG P L + + LCK
Sbjct: 470 MLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGN 529
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+E E+ + + ++ D +Y ++ +GRLR+ + EM KGL P V Y
Sbjct: 530 LEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTV 589
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L+ + L A + +M G N+ TYN LI+ +V ++ A F M+EKG
Sbjct: 590 LIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKG 649
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+ P+ +YT L+ C N Q A ++ + ++ V
Sbjct: 650 IFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGV 685
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 4/207 (1%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ + M E G PT+ T + L + CK K + +++ + + +YNV+++
Sbjct: 218 AVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLIN 277
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L G +A G+I EM + GL YN L+ + +L A L ++M G S
Sbjct: 278 GLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASP 337
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ TYN I ++G + A++ +ML + PD +Y +L+ G C+ NL AF +F
Sbjct: 338 TVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLF 397
Query: 529 NKSVNHDVMLARSILS--TFMISLCRR 553
++ + L +I++ T + LCR+
Sbjct: 398 DEL--RSIYLFPTIVTYNTLLDGLCRQ 422
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 95/200 (47%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F+ MI+ P + + + + L ++ + VEVY+ + + +YN ++ C
Sbjct: 187 FDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCK 246
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G++++ ++ EM+R+G P+ YN L+ ++ AK L +M +G + T
Sbjct: 247 GGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYT 306
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YN LI + G + AL L M+ KG +P TY S + GLC+ + A + + +
Sbjct: 307 YNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDML 366
Query: 533 NHDVMLARSILSTFMISLCR 552
++++ +T + CR
Sbjct: 367 ANNLLPDVVSYNTLIYGYCR 386
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 85/176 (48%)
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K++ ++ + V+ + + D+++ N ++ L + +A V + M G+ P +
Sbjct: 176 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN+L+++ C+ ++ L +M GC+ N TYN+LI+ S+ GE E A L M
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L+ G+ A TY L+ G + L A + + V + ++F+ LC+
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCK 351
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 128/329 (38%), Gaps = 48/329 (14%)
Query: 128 SLIQGKNTQKAFSVFNEVKFNC--EDIGPEICNSLLAVLAS--DGYIDNALKMFDEMSHR 183
+L+ G Q V ++K E I P+I + V S G + A + FDEM H
Sbjct: 414 TLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHE 473
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G+E + + I + + S+ +E+ + +I +++ G CK +E
Sbjct: 474 GLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAK--GFPPDLIIYNVVVDGLCKLGNLE 531
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
EA ++L ++ PD++ Y + G + + + + G+ P Y I
Sbjct: 532 EASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLI 591
Query: 304 LGLI----VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
G +ER E+ E + + ++N L V +D A FF M+EK
Sbjct: 592 HGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLC-KVRRMD--QAYNFFAEMVEK 648
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P N Y SY ++++ C G +EA
Sbjct: 649 GIFP------------------------------NKY-----SYTILINENCNMGNWQEA 673
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+ ++M +G+ PD +++L++ ++
Sbjct: 674 LSLYKQMLDRGVQPDSCTHSALLKQLGKD 702
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/527 (21%), Positives = 214/527 (40%), Gaps = 61/527 (11%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSV----- 141
Y ++++SL + N ++ ++ N+ L VY +I L + + +A +
Sbjct: 134 YSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLM 193
Query: 142 --------------FNEVKFNCEDIGPE-ICNS------LLAVLASDGYIDNALKMFDEM 180
FNE + +++G + +C + L+ G +DNA+ D+M
Sbjct: 194 QKGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKM 253
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE--------NSMING------- 225
+ +EF+ + I +C+ DE+ + S+I+G
Sbjct: 254 TKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEW 313
Query: 226 ------------------SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
+ II G C+ + EA ++ E++ R+ P + Y ++
Sbjct: 314 HKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVM 373
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
E G++ E +L + G P T YR I GL R+ EAKE + +
Sbjct: 374 IEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHH 433
Query: 328 TIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
+++ +AL+ G + A+ M+E+G L + L + + + L
Sbjct: 434 KLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFG 493
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
+ K + + D Y M+ +G L+EA+G+ M +G P+V Y +L+ C
Sbjct: 494 LLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLC 553
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ L+ A+ L + S + N TY + + G +E A++L H ML KG
Sbjct: 554 KAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAML-KGFLATTV 612
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+Y L+ G C+ ++ A ++ + ++D++ ST + C+R
Sbjct: 613 SYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKR 659
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 167/408 (40%), Gaps = 63/408 (15%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
++ L +FD++ V+ + + CE + M+ + + + V+
Sbjct: 113 NDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKL--SIVVYN 170
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++IHG CK +R+ EA ++ + L + + + + Y G E E++ K+ +
Sbjct: 171 VLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY---------YGKFNEAELLFKEMGEK 221
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVI--------VSGKFTIDDDVLNALIGSVS 342
G+ Y I+ C E+ I S +FT+ N+LI
Sbjct: 222 GLCANHITYS------ILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYP--YNSLINGYC 273
Query: 343 SIDPRSAI-VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY-----KVLSANDY 396
+ SA +F+ MI+KG PT+ T ++L C + + +VY K +S N Y
Sbjct: 274 KLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTY 333
Query: 397 ---------------------FTDME---------SYNVMVSFLCTSGRLREAYGVIQEM 426
F +M+ +YNVM+ C SG + EA+ ++ EM
Sbjct: 334 TFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEM 393
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
KG PD Y L+ C + AK+ D + N Y+ L+ + + G
Sbjct: 394 VGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRF 453
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
+ A+ M+E+GVA D Y L++G +E + +A F + + NH
Sbjct: 454 KDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNH 501
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/473 (22%), Positives = 190/473 (40%), Gaps = 82/473 (17%)
Query: 111 KVNKITLDSSVYRFIIPSLIQG----KNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVL 164
K+ K +++ +VY + SLI G N A F+E+ + + P + SL++
Sbjct: 252 KMTKASIEFTVYPY--NSLINGYCKLGNASAAKYYFDEMID--KGLTPTVVTYTSLISGY 307
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
++G A K+++EM+ +G+ +T F I C + + + + E+++R+ ++
Sbjct: 308 CNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERK--IMP 365
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
V ++I G C+ + EAF +LDE+ + PD YR + +G V E + +
Sbjct: 366 SEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFV 425
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSS 343
K Y + G E R +A V+V +D LI G+
Sbjct: 426 DDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTARE 485
Query: 344 IDPRS----------------AIVFFNF-------------------MIEKGRVPTLSTL 368
D R+ A+++ N M+++G +P + T
Sbjct: 486 HDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTY 545
Query: 369 SNLSKNLCKRNKSD--ELVEVYKVLSAN-----------DYFT---DME----------- 401
+ L LCK D EL+ ++S D+ T +ME
Sbjct: 546 TALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK 605
Query: 402 -------SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
SYN+++ C G++ EA ++ M + PD Y++++ C+ L+ A
Sbjct: 606 GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEA 665
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
KLW M G + Y+ L+ GE+E A L M+ +G+ + T
Sbjct: 666 IKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 92/252 (36%), Gaps = 61/252 (24%)
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
+P + TLS L L + + ++++ ++ + + + D+ Y+ +V LC +A
Sbjct: 93 MPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKE 152
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLL--------------------------RPAK 455
+I M+ + YN L+ C+ + A+
Sbjct: 153 MIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAE 212
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL----------------------- 492
L+ +M G N TY+ILI F GE++ A+
Sbjct: 213 LLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGY 272
Query: 493 ------------FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
F M++KG+ P TYTSL+ G C E AF+V+N+ +
Sbjct: 273 CKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNT 332
Query: 541 SILSTFMISLCR 552
+ + LCR
Sbjct: 333 YTFTAIISGLCR 344
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 188/424 (44%), Gaps = 44/424 (10%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSL-IQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLL 161
SVL +V D++ + +I L ++ K ++ V V+ C+ P + NS++
Sbjct: 121 SVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQ---PNVVTYNSIV 177
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
+ G AL + +M R V+ + I C + + +S+ E+ E
Sbjct: 178 NGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM---ETK 234
Query: 222 MINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
I S++ ++ G CK + + ++L ++ R+ P+ I + ++ + F G + E
Sbjct: 235 GIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEA 294
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+ K+ G++P T Y + G ++ R+ EA +
Sbjct: 295 NELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNM---------------------- 332
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ M+ P + T ++L K CK + DE +++++ +S +
Sbjct: 333 ------------LDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANT 380
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+Y+++V C SG+L A + QEM G+ PDV Y L++ C L A ++++
Sbjct: 381 VTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFED 440
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
+ S + ++ Y I+I + G++E A LF ++ KGV P+ TYT ++ GLC++ +
Sbjct: 441 LQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 500
Query: 521 LQAA 524
L A
Sbjct: 501 LSEA 504
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 181/385 (47%), Gaps = 9/385 (2%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D+A+ +F EM S + F F F A Q +LD +K E + I ++ +
Sbjct: 47 DDAIDLFQEMIRSRPLPSLVDFSRF---FSGVASTKQFNLVLDFCKKMELNGIAHNIYTL 103
Query: 231 -LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
++I+ FC+ + A+ VL ++ +PD + + L V E V++ + +
Sbjct: 104 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVE 163
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDP 346
G P Y + G+ A +L + D + +I S+ ID
Sbjct: 164 NGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCID- 222
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+AI F M KG +L T ++L LCK K ++ V++ K +++ ++ ++NV+
Sbjct: 223 -AAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVL 281
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ G+L+EA + +EM KG+ P+ YNSLM+ C ++ L A + D M + C
Sbjct: 282 IDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNC 341
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
S ++ T+ LI + +V ++ ++LF + ++G+ + TY+ L++G CQ L+ A E
Sbjct: 342 SPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEE 401
Query: 527 VFNKSVNHDVMLARSILSTFMISLC 551
+F + V+ V+ + LC
Sbjct: 402 LFQEMVSLGVLPDVMTYGILLDGLC 426
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/439 (22%), Positives = 187/439 (42%), Gaps = 40/439 (9%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN ++Y+SI+ + S + +L+++ + D Y II SL +
Sbjct: 167 QPNV----VTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCID 222
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
A S+F E++ NSL+ L G ++ +++ +M+ R + + I F V I
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLI 282
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
F + KL + + E+ + S ++ ++ G+C R+ EA +LD +
Sbjct: 283 DVFVKEGKLQEANELYKEMITKGIS--PNTITYNSLMDGYCMQNRLSEANNMLDLMVRNN 340
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C PD + + + + + + V E + +K K G+ T Y + G C+
Sbjct: 341 CSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGF------CQ-- 392
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
SGK I +++ F M+ G +P + T L LC
Sbjct: 393 -------SGKLEIAEEL-------------------FQEMVSLGVLPDVMTYGILLDGLC 426
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K ++ +E+++ L + D+ Y +++ +C G++ +A+ + + KG+ P+V
Sbjct: 427 DNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 486
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
Y ++ C++ L A L +M G N TYN LI G++ + +L M
Sbjct: 487 TYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEM 546
Query: 497 LEKGVAPDATTYTSLLEGL 515
G + DA++ +++ L
Sbjct: 547 KSCGFSADASSIKMVIDML 565
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 191/448 (42%), Gaps = 55/448 (12%)
Query: 51 LVARVI----NPYLLTHHSLALGFFNWAS-----------QQPNFTHSPLSYHSILKSLS 95
LVAR++ P ++T++S+ G + N +Y +I+ SL
Sbjct: 157 LVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLC 216
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
I+A S+ K+++ I Y ++ L + + ++ I P
Sbjct: 217 RDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDM--TSRKIIPN 274
Query: 156 IC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
+ N L+ V +G + A +++ EM +G+ +TI + + +C +L + +MLD
Sbjct: 275 VITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLD 334
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
+ + N+ V +I G+CK KRV+E K+ ++ R + + Y I+ + F
Sbjct: 335 LMVR--NNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQ 392
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
G + E + ++ LGV P Y + GL ++ +A E+ E + K +D
Sbjct: 393 SGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLD--- 449
Query: 334 LNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
IV + +IE +CK K ++ ++ L
Sbjct: 450 ----------------IVMYTIIIE---------------GMCKGGKVEDAWNLFCSLPC 478
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
++ +Y VM+S LC G L EA ++++M+ G +P+ YN+L+ A R+ L
Sbjct: 479 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTA 538
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFS 481
+ KL ++M + G S + + ++I S
Sbjct: 539 SAKLIEEMKSCGFSADASSIKMVIDMLS 566
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 165/376 (43%), Gaps = 13/376 (3%)
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G E T F I C +K+ + + ++ R EN V I++G CK
Sbjct: 130 GYEPDTTTFNTLINGLCLESKVSEAVVLV--ARMVENGCQPNVVTYNSIVNGICKSGDTS 187
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
A +L ++ R K D Y + + G + + K+ G+ Y +
Sbjct: 188 LALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLV 247
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRV 362
GL + + +L + + S K + N LI V + A + MI KG
Sbjct: 248 GGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGIS 307
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P T ++L C +N+ E + ++ N+ D+ ++ ++ C R+ E +
Sbjct: 308 PNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKL 367
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+++ ++GL + Y+ L++ C+ L A++L+ +M + G ++ TY IL+ +
Sbjct: 368 FRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCD 427
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVML 538
G++E AL +F ++ + + D YT ++EG+C+ ++ A+ +F K V +VM
Sbjct: 428 NGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 487
Query: 539 ARSILSTFMIS-LCRR 553
T MIS LC++
Sbjct: 488 Y-----TVMISGLCKK 498
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 102/213 (47%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ I AI F MI +P+L S + + + +++ K + N +
Sbjct: 40 GIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHN 99
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ + N+M++ C + AY V+ ++ + G +PD + +N+L+ C E + A L
Sbjct: 100 IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVA 159
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M +GC N+ TYN +++ + G+ AL L M E+ V D TY+++++ LC++
Sbjct: 160 RMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDG 219
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ AA +F + + + ++ + LC+
Sbjct: 220 CIDAAISLFKEMETKGIKSSLVTYNSLVGGLCK 252
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 138/307 (44%), Gaps = 8/307 (2%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQ------QPNFTHSPLSYHSILKSLSL 96
L+D S ++ VI +L + G A++ + + ++Y+S++ +
Sbjct: 263 LKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCM 322
Query: 97 SRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI 156
+++ +++L + N + D + +I + K + +F ++
Sbjct: 323 QNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVT 382
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
+ L+ G ++ A ++F EM GV + +G+ + C+N KL + L + ++++
Sbjct: 383 YSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 442
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
K + ++ V+ +II G CKG +VE+A+ + L + KP+ + Y ++ GS
Sbjct: 443 KSKMNL--DIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 500
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ E ++L+K + G P Y I + + + + +L E + S F+ D +
Sbjct: 501 LSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKM 560
Query: 337 LIGSVSS 343
+I +SS
Sbjct: 561 VIDMLSS 567
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/498 (22%), Positives = 217/498 (43%), Gaps = 18/498 (3%)
Query: 63 HHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS 120
HH A S +P+ P +SY ++++L R + +L+ ++ + D
Sbjct: 92 HHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVV 151
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCED-IGPEIC--NSLLAVLASDGYIDNALKMF 177
Y +I L KA + E+ CE I P + +SLL G ++ K+F
Sbjct: 152 TYGTLIRGLCDAAEVDKAVELMGEM---CESGIEPNVVVYSSLLQGYCKSGRWEDVGKVF 208
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR--ENSMINGSVIAVLIIHG 235
EMS +G+E + + I C+ K + ++D + +R E +++ +V+ I+
Sbjct: 209 VEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVL----INC 264
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK--KRKLGVA 293
CK V+EA VL ++ + PD + Y + + + + E +L++ + K V
Sbjct: 265 MCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVK 324
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVF 352
P + I GL R+ +A ++ ++ ++ N LIG + + R A+
Sbjct: 325 PNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMEL 384
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
+ M G P T S L K CK + D ++ + ++ Y ++ +C
Sbjct: 385 MDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCE 444
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G + A + EM DV Y++++ C+ L+ AK+L + G + + T
Sbjct: 445 QGMMERARNLFNEMDNN-FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVT 503
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
Y+I+I+ F++ G++E A + M G PD + SL++G + + E+ + +
Sbjct: 504 YSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMI 563
Query: 533 NHDVMLARSILSTFMISL 550
++ L I+ST SL
Sbjct: 564 TKNIALDSKIISTLSTSL 581
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 11/176 (6%)
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK---RKGLDPDVSFYNS 440
L E +L A D SYN +++ LC G A +++ M P+ Y
Sbjct: 61 LGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTV 120
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
LM A C + L A L M ++G ++ TY LI + E++ A+ L M E G
Sbjct: 121 LMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG 180
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSILSTFMISLCR 552
+ P+ Y+SLL+G C+ + +VF K + DV++ ++ SLC+
Sbjct: 181 IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLID----SLCK 232
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 77/383 (20%), Positives = 156/383 (40%), Gaps = 59/383 (15%)
Query: 51 LVARVINPYLLTHHSL------------ALGFFNWASQQPNFTHSPLSYHSILKSLSLSR 98
+V R + P ++T++ L A+G S++ ++Y++++K LS
Sbjct: 246 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEK-GVAPDVVTYNTLIKGLSDVL 304
Query: 99 QINAIDSVLKQVKVNKITLDSSVYRF--IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI 156
+++ +L+++ K + +V F +I L ++AF +V+ E+ G +
Sbjct: 305 EMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAF----QVRAMMEETGCMV 360
Query: 157 ----CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML 212
N L+ L + A+++ DEM+ G+E + + + I FC+ ++ + +L
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLL 420
Query: 213 DEVRKRE----------------------------NSMINGSVIAVL----IIHGFCKGK 240
+R R N M N + V+ +IHG CK
Sbjct: 421 STMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAG 480
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
++ A ++L + PD + Y IV F G + VLK+ G P +
Sbjct: 481 DLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFD 540
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVF----FNFM 356
I G + I + EL +++ +D +++ L S+ + + A++ F+
Sbjct: 541 SLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPDFSAE 600
Query: 357 IEKGRVPTLSTLSNLSKNLCKRN 379
I KG + + L + N+C +
Sbjct: 601 ISKGNINSPQELMKVLHNVCPQT 623
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 143/302 (47%), Gaps = 2/302 (0%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I F + +R ++A + ++ + CKPD + I+ + G + V + +
Sbjct: 159 ILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAM 218
Query: 291 G-VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRS 348
G V P + + L+ +R+ EA+E+ + F D N +I G + +
Sbjct: 219 GFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQE 278
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ + M+ K VPT T L +LCK + E+++V++A+ + + Y ++
Sbjct: 279 ALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIH 338
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
SGR++EA + EM G PDV + +++ C+ A K +++M GC
Sbjct: 339 GFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKP 398
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ TY +I S++G + A R+ M+ G PD+ TY LL+G C+ L A ++
Sbjct: 399 NVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLL 458
Query: 529 NK 530
++
Sbjct: 459 DE 460
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 119/509 (23%), Positives = 211/509 (41%), Gaps = 36/509 (7%)
Query: 43 LRDSLSP-------SLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLS 95
+R+ L P S VA V+ +T A+ FF WA +Q F H +Y+ ++ L
Sbjct: 73 IRNVLGPVHGQVLGSHVAAVLRSLKVT--GTAISFFRWAGEQAGFQHDVFTYNCLMNLLV 130
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN-CEDIGP 154
+ + ++ +++ I ++ + +I S + + A + F +K C+ P
Sbjct: 131 AEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCK---P 187
Query: 155 EICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML 212
++ L+ V L G + A ++F EM G + + AK +V
Sbjct: 188 DLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAK--RVKEAR 245
Query: 213 DEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
+ + E IA +I G K +EA KVLD + + C P + Y I+
Sbjct: 246 EVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSL 305
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
G++ E + + G P + Y I G R+ EA L + +V + D
Sbjct: 306 CKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDV 365
Query: 332 DVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
+I G S + A F M+ G P + T + + + L K + + K
Sbjct: 366 ITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKG 425
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR--- 447
+ A+ F D +Y ++ C GRL EA ++ E+ + P++ Y+SL++ C
Sbjct: 426 MIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGS 485
Query: 448 -----EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+DL +K + + C +I + G ++ A R+F M+ +G
Sbjct: 486 VENTLDDLFEQSKAAAENLDPGLCCS-------IIVGLCKTGRLDEACRIFQRMVSEGCK 538
Query: 503 PDATTYTSLLEGLC--QETNLQAAFEVFN 529
PDATTY L+ GLC +E ++ AF + +
Sbjct: 539 PDATTYNILINGLCRSRENRVERAFALLH 567
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 109/498 (21%), Positives = 192/498 (38%), Gaps = 42/498 (8%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ F ++Y++++ L+ + VL + Y ++ SL +
Sbjct: 252 EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTL 311
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
++A +F + + I SL+ A G + A +FDEM G I V
Sbjct: 312 ERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVM 371
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
I C++ Q +E+ + V II G K RV AF+++ +
Sbjct: 372 IDGLCKSGNFEQAAKSFEEMMR--GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAH 429
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF------------- 302
C PD + Y + + F +G + E +L + K +P Y
Sbjct: 430 GCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENT 489
Query: 303 -----------------------ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
I+GL R+ EA + + +VS D N LI
Sbjct: 490 LDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILIN 549
Query: 339 GSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
G S + R A + + G +P T + L LCK + D V++ + S+ +
Sbjct: 550 GLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGW 609
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ +Y + + LC G++ A + QEM R+G PD + Y ++ + L A K
Sbjct: 610 NADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACK 669
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG-VAPDATTYTSLLEGL 515
+D+M G + TY L+ G ++ A F ML +G + Y +L+ G
Sbjct: 670 FFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGF 729
Query: 516 CQETNLQAAFEVFNKSVN 533
C+ + AA ++F ++
Sbjct: 730 CKALKVDAALKLFEDMIS 747
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 1/185 (0%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT-DMESYNVMV 407
A+ F M K P L T L LCK ++ EV+ + A + D + MV
Sbjct: 173 AVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMV 232
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
L + R++EA V +M++ G PD YN++++ + + A K+ D M A C
Sbjct: 233 RTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACV 292
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
TY IL++ + G +E A LF M G P++ YTSL+ G + ++ A +
Sbjct: 293 PTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSL 352
Query: 528 FNKSV 532
F++ V
Sbjct: 353 FDEMV 357
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/440 (20%), Positives = 165/440 (37%), Gaps = 87/440 (19%)
Query: 50 SLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQ 109
S + RV N + + +A G F P+ ++Y +L +++ +L +
Sbjct: 411 SKIGRVANAFRIMKGMIAHGCF------PD----SVTYICLLDGFCKLGRLDEAAQLLDE 460
Query: 110 VKVNKITLDSSVYRFIIPSLIQGKNTQKAFS-VFNEVKFNCEDIGPEICNSLLAVLASDG 168
+ + + +Y ++ L G + + +F + K E++ P +C S++ L G
Sbjct: 461 LDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTG 520
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC---ENAKLGQVLSMLDEVRKRENSMING 225
+D A ++F M G + + + I C EN ++ + ++L ++ +
Sbjct: 521 RLDEACRIFQRMVSEGCKPDATTYNILINGLCRSREN-RVERAFALLHDLEMV--GYLPD 577
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
+V + G CK V+ A K+L+E R D +AY + G V + +
Sbjct: 578 AVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQ 637
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID 345
+ + G AP Y I GLI +++
Sbjct: 638 EMVRQGGAPDAAAYCCIINGLIKGKKL--------------------------------- 664
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE---------------------- 383
A FF+ MI KG+ PT++T + L + LC DE
Sbjct: 665 -EDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYD 723
Query: 384 -----LVEVYKVLSANDYFTDMESY-NVMVSF--------LCTSGRLREAYGVIQEMKRK 429
+ KV +A F DM S NV + L SG+ +A ++QEM
Sbjct: 724 ALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAG 783
Query: 430 GLDPDVSFYNSLMEACCRED 449
G P + + ++++ + D
Sbjct: 784 GSPPHAATFTAILDGLRKSD 803
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D+ +YN +++ L + Y + +EM + G+ P+ +N L+ + R A +
Sbjct: 118 DVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF 177
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG-VAPDATTYTSLLEGLCQ 517
+ M C +L T+ IL+ + G E A +FH M+ G V PD +T+++ L +
Sbjct: 178 EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLK 237
Query: 518 ETNLQAAFEVFNK 530
++ A EVF +
Sbjct: 238 AKRVKEAREVFGQ 250
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
++ G DV YN LM E + ++M +G + N ++NILI F+
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
+ A+ F M K PD T+ L++ LC+ + AFEVF++ + + L T
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230
Query: 547 MI 548
M+
Sbjct: 231 MV 232
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/453 (20%), Positives = 201/453 (44%), Gaps = 12/453 (2%)
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
+++ L R++ + ++ + + Y +I + +KA+ + +++ +
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346
Query: 149 CEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV 208
N ++ L +D +A+ +F EM+ G+ + + I C+ K+ +
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREA 405
Query: 209 LSMLDEVRKRENSMINGSVIAVLIIHG----FCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L++ +++ + G ++ H +C ++EA K+ E+ + P+ + Y
Sbjct: 406 LNLWEKMNE------TGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTY 459
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + + + +L + ++ GV+ Y I GL V R+CE E+ + +
Sbjct: 460 TTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFET 519
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
F N++I G + + SA + M KG P + T ++ CK + D
Sbjct: 520 EGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDL 579
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+++ + D+ +YN ++ C G + A V+ M + GL P++S YNS +
Sbjct: 580 ALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFIT 639
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
++ A +L+++M G + TY LI FS+ G + AL+L+ M+ KG P
Sbjct: 640 GYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIP 699
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
D T+T+L GLC+ ++ A ++ ++ D+
Sbjct: 700 DHITFTALTHGLCRNGDIDDARKLLDEMNRLDI 732
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 117/498 (23%), Positives = 208/498 (41%), Gaps = 25/498 (5%)
Query: 25 RPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP 84
R RK + E+TL RD L P+ V + T + + Q + P
Sbjct: 296 REVRKALDIFEETL-----RDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLP 350
Query: 85 LS--YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
+ ++ ++K L + S+ K++ + I D+ Y +I L Q + ++A +++
Sbjct: 351 STNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLW 409
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
K N + P I +SLL +G +D A+K++ EM +G + + + +
Sbjct: 410 E--KMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHI 467
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
A + ++L E++ +N + +I+G C RV E ++L P
Sbjct: 468 NKAAFDKAYALLAEMK--QNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPT 525
Query: 261 FIAYRIVAEEF---KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-- 315
+ Y + F +MGS F V ++ G+ P Y FI G + C+
Sbjct: 526 AMTYNSIINGFIKAGMMGSAF---AVYQQMCAKGIPPNIVTYTSFIDGY-CKTSCCDLAL 581
Query: 316 KELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
K L +V G D N+LI G + A+ M++ G +P +S ++
Sbjct: 582 KMLNDVRCKG-LRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITG 640
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
+E + +Y+ + D +Y ++ G + A + EM KG PD
Sbjct: 641 YKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPD 700
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+ +L CR + A+KL D+M N+ YN+LI+ + G+++ A RL
Sbjct: 701 HITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHD 760
Query: 495 NMLEKGVAPDATTYTSLL 512
MLE+ + PD TTY L+
Sbjct: 761 EMLERKIMPDDTTYDILV 778
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/475 (20%), Positives = 196/475 (41%), Gaps = 55/475 (11%)
Query: 117 LDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKM 176
LD+ ++ ++ + + A +F+E+ + + +C+ +A L + AL +
Sbjct: 175 LDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLV 234
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
+M G F + + ++ + L + DE+ M V+A ++HG+
Sbjct: 235 LRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKM--SVVLATTLMHGY 292
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
C + V +A + +E P + Y ++ G + + ++ R G+ P T
Sbjct: 293 CLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPST 352
Query: 297 NDYREFILGLIVERRICEA----KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVF 352
N++ I GL+ ++ +A KE+ + + FT + +L + I R A+
Sbjct: 353 NEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYN--ILIHWLCQRRKI--REALNL 408
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL--------------------- 391
+ M E G P + T +L C DE V++Y +
Sbjct: 409 WEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468
Query: 392 -------------------SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
S NDY +YN +++ LC GR+ E +++ + +G
Sbjct: 469 KAAFDKAYALLAEMKQNGVSCNDY-----TYNTLINGLCVVGRVCEVGEMLKRFETEGFV 523
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P YNS++ + ++ A ++ QM A G N+ TY I + + + AL++
Sbjct: 524 PTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKM 583
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
+++ KG+ PD Y SL+ G CQE N+ A +V + ++ S+ ++F+
Sbjct: 584 LNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFI 638
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/521 (20%), Positives = 203/521 (38%), Gaps = 80/521 (15%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PE--ICNSLL 161
+ ++ ++I D V I SL + ++ +A V ++ +D G P NS++
Sbjct: 199 LFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKM----QDAGFVPWDFTFNSVV 254
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
VL G ++ AL + DE+ G + S + + +C ++ + L + +E + +
Sbjct: 255 DVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLR--DG 312
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELR---------------------------- 253
++ V ++I G + E+A+++ ++R
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372
Query: 254 --IRECK----PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
+E PD Y I+ + E + +K + GV P Y +L
Sbjct: 373 SLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC 432
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
V + EA +L + FT + L+ G ++ A M + G
Sbjct: 433 VNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDY 492
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T + L LC + E+ E+ K + +YN +++ +G + A+ V Q+M
Sbjct: 493 TYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552
Query: 427 KRK-----------------------------------GLDPDVSFYNSLMEACCREDLL 451
K GL PD++ YNSL+ C+E +
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNM 612
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A ++ M G N+ YN I+ + + +E ALRL+ M+++G+ D TYT+L
Sbjct: 613 SHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTL 672
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++G ++ N+ A +++++ V + + LCR
Sbjct: 673 IDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCR 713
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 134/310 (43%), Gaps = 2/310 (0%)
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
++A ++ DE+ E +PD + + +VL+K + G P +
Sbjct: 194 DDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSV 253
Query: 303 ILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGR 361
+ L+ R+ EA + E++ +GK + G + R A+ F + G
Sbjct: 254 VDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGL 313
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
VPT T + L + + ++ E+ + + + +N+++ L ++A
Sbjct: 314 VPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVS 373
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+ +EM G+ PD YN L+ C+ +R A LW++M +G + TY+ L+ +
Sbjct: 374 LFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC 432
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
G ++ A++L+ M KG P+ TYT+L++G + A+ + + + V
Sbjct: 433 VNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDY 492
Query: 542 ILSTFMISLC 551
+T + LC
Sbjct: 493 TYNTLINGLC 502
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 134/354 (37%), Gaps = 56/354 (15%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWAS-----------QQPNFTHSPLSYHSILKSLS 95
L + + P ++T+ +L G N A+ +Q + + +Y++++ L
Sbjct: 443 LYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLC 502
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
+ ++ + +LK+ + + Y II I+ AF+V+ ++ + I P
Sbjct: 503 VVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM--CAKGIPPN 560
Query: 156 ICNSLLAVLASDGYI-----DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS 210
I + DGY D ALKM +++ +G+ + I+ FC+ + L
Sbjct: 561 IVTYTSFI---DGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQ 617
Query: 211 MLDEVRKRE--------NSMING-------------------------SVIAVLIIHGFC 237
+L + K NS I G + +I GF
Sbjct: 618 VLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFS 677
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K V A K+ E+ + PD I + + G + + +L + +L + P
Sbjct: 678 KDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVL 737
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG--SVSSIDPRSA 349
Y I G + ++ EA L + ++ K DD + L+G S+ S P A
Sbjct: 738 MYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVGMKSLGSDSPIDA 791
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 2/183 (1%)
Query: 356 MIEKGRVPTLSTLSNLSKNLC-KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M KGR P + + ++ C K D+ V ++ + A++ D +V ++ LC
Sbjct: 168 MRGKGR-PLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
A V+++M+ G P +NS+++ + + A + D++ A+G ++
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
L+ + E+ AL +F L G+ P TYT L+ G +E + A+E+ + +H
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346
Query: 535 DVM 537
++
Sbjct: 347 GLL 349
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 62/127 (48%)
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
EM+ KG D ++ +M AC +E + A +L+D+M AS + + ++ I+ ++
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILS 544
+ AL + M + G P T+ S+++ L + ++ A + ++ + ++ + +
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286
Query: 545 TFMISLC 551
T M C
Sbjct: 287 TLMHGYC 293
>gi|302798519|ref|XP_002981019.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
gi|300151073|gb|EFJ17720.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
Length = 448
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 168/372 (45%), Gaps = 19/372 (5%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D A M M G + + G+ + KFCE ++G+V + E+ NG +
Sbjct: 26 VDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVCELFQELES------NGVAVG 79
Query: 230 VLIIHG-----FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+L + C G + FK D P +AY+ + + G E V+
Sbjct: 80 MLAYNAILKALMCSGD-FDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIKTGKTREASEVV 138
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS---V 341
+ K V P Y I L R +A ++ +++V + + DV +L+ +
Sbjct: 139 GEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNVDVYTSLLAAHCRT 197
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+D A F MI++G P+ ST L + LC +S +++ + + + D
Sbjct: 198 RKLD--GAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDEN 255
Query: 402 SYNVMVSFLCTSGRLREAYGVIQE-MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+Y ++ C +GR+ EA + +E ++ + D YN L+E CR + A ++
Sbjct: 256 TYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAG 315
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M GC L+TYN LI F + E++ AL+LF M EKG +P+ Y++ ++GLC+
Sbjct: 316 MVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGK 375
Query: 521 LQAAFEVFNKSV 532
+ A E F +SV
Sbjct: 376 INEAHEFFQQSV 387
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 150/354 (42%), Gaps = 14/354 (3%)
Query: 209 LSMLDEVRKRENSMINGS-----VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
LS +D+ R ++M+ V L++ FC+ KRV E ++ EL +A
Sbjct: 23 LSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVCELFQELESNGVAVGMLA 82
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVI 322
Y + + G G P Y+ + LI + EA E+ GE+I
Sbjct: 83 YNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIKTGKTREASEVVGEMI 142
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRS--AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
K ++ D + + SV R+ A+ F+ M+EK VP + ++L C+ K
Sbjct: 143 ---KKSVPDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNVDVYTSLLAAHCRTRK 199
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
D ++ + Y +Y +++ LC GR AY + M+ +G PD + Y S
Sbjct: 200 LDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYAS 259
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKT--YNILISKFSEVGEIEGALRLFHNMLE 498
L+ CC + AK L+ ++ G L YN+LI ++E AL + M++
Sbjct: 260 LIYGCCMAGRITEAKVLFKEVL-EGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVD 318
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
KG P TY +L+ G + + A ++F I STF+ LC+
Sbjct: 319 KGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCK 372
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/438 (19%), Positives = 176/438 (40%), Gaps = 29/438 (6%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY+ +++ L+ ++ ++L + D ++ + K + +F E+
Sbjct: 12 SYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVCELFQEL 71
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ N +G N++L L G D K D G + + + + K
Sbjct: 72 ESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIKTGKT 131
Query: 206 GQVLSMLDEVRKRE--NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ ++ E+ K+ + M ++I+VL CK R ++A KV D + +E P+
Sbjct: 132 REASEVVGEMIKKSVPDGMTYTALISVL-----CKHNRADDAMKVFDIMVEKEIVPNVDV 186
Query: 264 Y----------RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
Y R + ++L + +R G P + Y + L R
Sbjct: 187 YTSLLAAHCRTRKLDGAYRLFVEMIQR----------GYGPSASTYGLLLRCLCNGGRSY 236
Query: 314 EAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN-L 371
A ++ + S D++ +LI G + A V F ++E + + + N L
Sbjct: 237 LAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVL 296
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
+ LC+ +K +E +EV + +++YN ++ + + +A + + M+ KG
Sbjct: 297 IEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGF 356
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
P+ Y++ ++ C+ + A + + Q GC + TYN LI ++ A R
Sbjct: 357 SPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHR 416
Query: 492 LFHNMLEKGVAPDATTYT 509
L+ M E+G D + T
Sbjct: 417 LYREMGERGYIADRSLRT 434
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 1/197 (0%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M+E G VP + + L + L K + D+ + + Y D+ + ++V C R
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ E + QE++ G+ + YN++++A K D G ++ Y
Sbjct: 61 VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
++ + G+ A + M++K V PD TYT+L+ LC+ A +VF+ V +
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKE 179
Query: 536 VMLARSILSTFMISLCR 552
++ + ++ + + CR
Sbjct: 180 IVPNVDVYTSLLAAHCR 196
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/499 (23%), Positives = 211/499 (42%), Gaps = 25/499 (5%)
Query: 50 SLVARVINPY-----LLTHHSLALGFFNWA----SQQPNFTHSP--LSYHSILKSLSLSR 98
S+VA ++P LL H + G A S F SP ++Y+++L +
Sbjct: 194 SIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKG 253
Query: 99 QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN 158
+ ++L ++K + + Y ++ + + ++A V + N + N
Sbjct: 254 MLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYN 313
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRG------VEFSTIGFGVFIWKFCENAKLGQVLSML 212
L A L G +D A ++ DEM G V ++T+ F + +A L +L
Sbjct: 314 VLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDA-----LRLL 368
Query: 213 DEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
+E+R E + V ++I G CK +E A L+++ PD I Y +
Sbjct: 369 EEMR--EKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHC 426
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
G++ + ++ + + G+ T + L E+R EA+ L + F D+
Sbjct: 427 KAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEV 486
Query: 333 VLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
++ + + A+ ++ MIEK P++ST + L K L + + E ++ L
Sbjct: 487 SYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNEL 546
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
D +YN+++ C G L A+ +M PDV N+LM C L
Sbjct: 547 MEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKL 606
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A KL++ G ++ TYN LI + G+++ AL F +M +G+ PDA TY +
Sbjct: 607 DKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVV 666
Query: 512 LEGLCQETNLQAAFEVFNK 530
L L + + A + +K
Sbjct: 667 LSALSEAGRTEEAQNMLHK 685
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/509 (21%), Positives = 208/509 (40%), Gaps = 47/509 (9%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y++++ + + I V++ + N D Y + L Q +AF + +E+
Sbjct: 276 TYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEM 335
Query: 146 KFNCEDIG---PEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E +G P++ N+L +AL++ +EM +GV+ + + + I C
Sbjct: 336 ----ERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLC 391
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
++ +L L L+++ ++ + + +IH CK + +A+ ++DE+ R K D
Sbjct: 392 KDGELEGALGCLNKMA--DDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLD 449
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
V E + +L+ + G P Y + E A L +
Sbjct: 450 TFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWD 509
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
++ K T N LI +S + + AI N ++EKG VP +T + + CK
Sbjct: 510 EMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEG 569
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ + + + N + D+ + N +++ LC +G+L +A + + KG DV YN
Sbjct: 570 DLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYN 629
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+L++ C++ + A + M A G + TYN+++S SE G E A + H + E
Sbjct: 630 TLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAES 689
Query: 500 GV--------------------APDATT---------------YTSLLEGLCQETNLQAA 524
G DA T YT L+ GLC + A
Sbjct: 690 GTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEA 749
Query: 525 FEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ ++ + + + S T M L +R
Sbjct: 750 KAILDEMMQKGMSVDSSTYITLMEGLVKR 778
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 168/399 (42%), Gaps = 10/399 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ S G + +AL M G+ + + + C LG+ ++L R
Sbjct: 208 NLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALL--ARM 265
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+++ + ++ + + +++A KV++ + +PD Y ++A G V
Sbjct: 266 KKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKV 325
Query: 278 FEREVVLKKKRKLG-VAPRTNDYREFILGLIVERRICEA----KELGEVIVSGKFTIDDD 332
E + + +LG + P Y R +A +E+ E V +
Sbjct: 326 DEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNI 385
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
V+ L + A+ N M + G P + T + L CK + + +
Sbjct: 386 VIKGL---CKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMV 442
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D + N ++ LC R EA G++Q ++G PD Y ++M A +E
Sbjct: 443 RRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSE 502
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
PA +LWD+M + ++ TYN LI S +G ++ A+ + ++EKG+ PD TTY ++
Sbjct: 503 PALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIII 562
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
C+E +L+ AF+ NK V + +T M LC
Sbjct: 563 HAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLC 601
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 37/234 (15%)
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
VL+AL S S+ P++++ F ++ P T + L C + + + +
Sbjct: 173 VLSALARSPST-SPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQ 231
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D +YN +++ C G L EA ++ MK+ G+ P YN+L+ A R ++
Sbjct: 232 GFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIK 291
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE------------------------- 487
A K+ + M A+G +L TYN+L + + G+++
Sbjct: 292 QATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTL 351
Query: 488 -----------GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
ALRL M EKGV T+ +++GLC++ L+ A NK
Sbjct: 352 ADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNK 405
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 2/128 (1%)
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKL--WDQMFASGCSGNLKTYNILISKFSEVG 484
+R + P + N+++ A R P L + + A N T+N+L+ G
Sbjct: 159 RRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKG 218
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILS 544
+ AL M G++PDA TY +LL C++ L A + + V R +
Sbjct: 219 TLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYN 278
Query: 545 TFMISLCR 552
T + + R
Sbjct: 279 TLVSAYAR 286
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 162/378 (42%), Gaps = 7/378 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
+ LL + G+ A+ +F ++ +G+ S + I +C A L S+L + K
Sbjct: 59 DKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILK 118
Query: 218 R--ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ +M+ + + I+GFC V +A +L + D +Y + G
Sbjct: 119 MGFQPNMVTFNTL----INGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNG 174
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ +L+K + V P Y I GL +R I +A L ++ S +D N
Sbjct: 175 QTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYN 234
Query: 336 ALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+LI S+ R A M+ P T + L LCK + E V+ V+
Sbjct: 235 SLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKR 294
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D+ +YN ++ C S + EA + M ++GL+PDV YN L+ C+ D++ A
Sbjct: 295 GEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEA 354
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
L+ ++ NL TYN LI ++G + L M ++G +PD TY L+
Sbjct: 355 MVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDA 414
Query: 515 LCQETNLQAAFEVFNKSV 532
C+ + A +F + V
Sbjct: 415 FCKSKPYEKAISLFRQIV 432
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 170/380 (44%), Gaps = 6/380 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ +G + A+ ++ +G +G I C+N GQ L ++K
Sbjct: 129 NTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKN---GQTRDALQLLQK 185
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E ++ ++I +I G CK + + +A ++ + R D +AY + +G
Sbjct: 186 MEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQ 245
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
E +L + + P + + L E RI EA+ + V++ D NA
Sbjct: 246 WREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNA 305
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
L+ G S + A FN M+++G P + + L CK + DE + ++K + +
Sbjct: 306 LMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKN 365
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
++ +YN ++ LC GR+ ++ EM +G PD+ YN ++A C+ A
Sbjct: 366 LVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAI 425
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L+ Q+ G + Y++++ F + +++ A ++L G P+ TYT ++ L
Sbjct: 426 SLFRQI-VQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINAL 484
Query: 516 CQETNLQAAFEVFNKSVNHD 535
C++ + A + +K ++D
Sbjct: 485 CKDCSFDEAMTLLSKMDDND 504
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 166/369 (44%), Gaps = 17/369 (4%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
SL+ L +G +AL++ +M V + I + I C++ + L + V R
Sbjct: 165 SLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSR 224
Query: 219 ENSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
G ++ V+ +IHG C + EA ++L + PD + I+ +
Sbjct: 225 ------GILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKE 278
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G + E + V K G P Y + G + + EA+EL +V K ++ DVL
Sbjct: 279 GRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMV--KRGLEPDVL 336
Query: 335 N--ALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
N LI ID A+V F + K VP L+T ++L LCK + + E+ +
Sbjct: 337 NYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEM 396
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
D+ +YN+ + C S +A + +++ +G+ PD Y+ ++E C+ + L
Sbjct: 397 CDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV-QGIWPDFYMYDVIVENFCKGEKL 455
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
+ A++ + GC N++TY I+I+ + + A+ L M + PDA T+ ++
Sbjct: 456 KIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETI 515
Query: 512 LEGLCQETN 520
+ G QE N
Sbjct: 516 I-GALQERN 523
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 103/475 (21%), Positives = 200/475 (42%), Gaps = 20/475 (4%)
Query: 38 LHQLGLRDSLSPSLVARVINPYLLTHH-SLA---LGFFNWASQQPNFTHSPLSYHSILKS 93
LH G+ S++ + +IN Y H S A LG QPN +++++++
Sbjct: 81 LHSKGITPSIATLTI--LINCYCHQAHLSFAFSLLGTILKMGFQPNM----VTFNTLING 134
Query: 94 LSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCED-I 152
++ ++ + + LD Y +I L + T+ A + +++ ED +
Sbjct: 135 FCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKME---EDLV 191
Query: 153 GPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS 210
P + ++++ L D I +AL++F ++ RG+ + + I C + +
Sbjct: 192 RPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATR 251
Query: 211 MLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
+L + R N + +L+ CK R+ EA V + R KPD + Y + E
Sbjct: 252 LL-TMMVRGNINPDDYTFNILV-DALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEG 309
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
F L +V E + + K G+ P +Y I G + EA L + I +
Sbjct: 310 FCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPN 369
Query: 331 DDVLNALIGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
N+LI + + S + + M ++G+ P + T + CK ++ + +++
Sbjct: 370 LATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFR 429
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+ + D Y+V+V C +L+ A +Q + G P+V Y ++ A C++
Sbjct: 430 QI-VQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDC 488
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
A L +M + C + T+ +I E E + A +L M+E+G+ D
Sbjct: 489 SFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVND 543
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 130/283 (45%), Gaps = 11/283 (3%)
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
F L+G++ K+G P + I G + + +A +++ + +D
Sbjct: 110 FSLLGTIL----------KMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLD 159
Query: 331 DDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
+ +LI G + R A+ M E P L T S + LCK + + ++
Sbjct: 160 EFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFS 219
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
++++ D+ +YN ++ C+ G+ REA ++ M R ++PD +N L++A C+E
Sbjct: 220 LVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEG 279
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
+ A+ ++ M G ++ TYN L+ F + A LF+ M+++G+ PD Y
Sbjct: 280 RIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYN 339
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L+ G C+ + A +F + +++ + ++ + LC+
Sbjct: 340 VLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCK 382
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 80/177 (45%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
FN M+ K P + L + + + ++ L + + + ++++ C
Sbjct: 43 FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
L A+ ++ + + G P++ +N+L+ C ++ A + A G + +
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
Y LI+ + G+ AL+L M E V P+ TY+++++GLC++ + A +F+
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFS 219
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/482 (20%), Positives = 213/482 (44%), Gaps = 39/482 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y++++ L + + + D + K++ + + Y +I +L + + A +F++
Sbjct: 339 FAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDK 398
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ + NSL+ G +D A + M G+ + + I C N
Sbjct: 399 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGD 458
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + + E+ +R + N + A +I+GFCK K+++EA ++ D++ P+ + +
Sbjct: 459 LSSAMELHREMAERGIAWNNYTFTA--LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 516
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE------- 317
++ E + L+G++ + + + ++G+ P YR I GL + + +A E
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576
Query: 318 -------------LGEVIVSGKFT-------------IDDDVLNALI---GSVSSIDPRS 348
L + G+FT + D+++ I ++ D
Sbjct: 577 SYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 636
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
+ V F M E+G P + + L K + + + + + Y + ++ V+++
Sbjct: 637 SCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLIN 696
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC SG L A + +EM + P+ YN ++ E + AK L M G
Sbjct: 697 NLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLA 755
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ ++NILI + G+I+ A+ L + E G +PD +Y++++ LC+ ++ AFE++
Sbjct: 756 SIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELW 815
Query: 529 NK 530
N+
Sbjct: 816 NE 817
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 167/369 (45%), Gaps = 19/369 (5%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A +FD+M GV + I +CE+ L ++ VR + +V ++
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV--VRMESEGVKASAVPYNVL 239
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR---K 289
++G CK RV+EA +V + + D + YR + F M E E+ L+ +
Sbjct: 240 MYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRME---ELEMALRITHDMIR 296
Query: 290 LGVAPRTNDYREFILGL----IVERRICEAKELGEV-IVSGKFTIDDDVLNALIGSVSSI 344
LG P + I L +VE A +LG++ +V F NALI +
Sbjct: 297 LGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFA-----YNALIDKLCKN 351
Query: 345 DP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ A F M +G P T + L LCKR ++ + ++ + + Y
Sbjct: 352 ERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPY 411
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N +++ C G L A G++ M ++GL P + Y+ L+ CR L A +L +M
Sbjct: 412 NSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAE 471
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G + N T+ LI+ F + +++ A RLF M++ V P+ T+ ++EG C N++
Sbjct: 472 RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRK 531
Query: 524 AFEVFNKSV 532
AF+++++ V
Sbjct: 532 AFQLYDQMV 540
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 176/392 (44%), Gaps = 19/392 (4%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D A + M GV+ S + + V ++ C+N ++ + + + +N M+N V A
Sbjct: 214 LDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEV-------KNVMVNIGVTA 266
Query: 230 -----VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+++GFC+ + +E A ++ ++ P + +E + V E +
Sbjct: 267 DEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLA 326
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
K LG+ P Y I L R +A L + + +G+ ++V A++ + ++
Sbjct: 327 CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEM-AGRGLEPNEVTYAIL--IHAL 383
Query: 345 DPRS----AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
R A+ F+ M +KG T+ ++L CK+ D + +
Sbjct: 384 CKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTA 443
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
SY+ +++ LC +G L A + +EM +G+ + + +L+ C++ + A +L+D+
Sbjct: 444 ASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDK 503
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M S N T+N++I + VG I A +L+ M+E G+ PD TY SL+ GLC +
Sbjct: 504 MIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSG 563
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ A E N +L L+ + L R
Sbjct: 564 VSKANEFVADLENSYAVLNNFSLTALLYGLFR 595
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/403 (20%), Positives = 159/403 (39%), Gaps = 37/403 (9%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N + ++++ +++ L I + Q+ + D+ YR +I L KA
Sbjct: 508 NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKA 567
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+++ + + +LL L +G ++DEM+ RGV+ + F + ++
Sbjct: 568 NEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYA 627
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
+ + + E++ E + + +I K + + +A D++ I
Sbjct: 628 ALKQHDKEKSCVLFREMK--EQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYS 685
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
P+ + + ++ G + E++ K+ V P Y F+ E + +AK+L
Sbjct: 686 PNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDL 745
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
++ G ++IV FN +I K LCK
Sbjct: 746 HSAMLQGHL--------------------ASIVSFNILI---------------KGLCKA 770
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
K E +++ + ++ + + D SY+ ++ LC G + +A+ + EM KGL PDV Y
Sbjct: 771 GKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAY 830
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
N + C A ++ M SG N TY L+S S
Sbjct: 831 NIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGIS 873
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 35/186 (18%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR-----------EDLL 451
YNV++ LC + R++EA V M G+ D Y +L+ CR D++
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 295
Query: 452 R----PA-------------KKLWDQMFASGCS-------GNLKTYNILISKFSEVGEIE 487
R P+ K+L ++ F+ C N+ YN LI K + +
Sbjct: 296 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFD 355
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
A RLF M +G+ P+ TY L+ LC+ ++ A +F+K + + + ++ +
Sbjct: 356 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 415
Query: 548 ISLCRR 553
C++
Sbjct: 416 NGYCKQ 421
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A + +M + G+ D Y + + A C L A+ L +M + G + YN+L+
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 241
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+ ++ A+ + + M+ GV D TY +L+ G C+ L+ A + HD++
Sbjct: 242 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALR-----ITHDMIR 296
Query: 539 ARSILS----TFMISLCRR 553
+ S +FMI R+
Sbjct: 297 LGFVPSEANCSFMIDELRK 315
>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
Length = 662
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 198/455 (43%), Gaps = 26/455 (5%)
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDN 172
+ L+ Y +I +L + F + E+ + P + N L+ L G ++
Sbjct: 7 VALNEYSYTAMIKALCKAGKVDAGFEMLAELWR--AGLQPTVVTYNVLMDALCKSGRVEE 64
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A ++ M G+ S + FG+ I + G+V +L E+ + S VI +
Sbjct: 65 AFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVS--PNEVIYNEL 122
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I C+ +A ++ DE+ +++ KP + Y ++A+ G + E +L+ +G+
Sbjct: 123 IGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGM 182
Query: 293 APRTNDYREFILGLIVE-RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
+ + L+ RR+ + +V+ +D ++ A + + V
Sbjct: 183 TVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAV 242
Query: 352 FFNF------------------MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
F M+ KG T + + + CK +K +E ++++ ++
Sbjct: 243 GIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTR 302
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ D+ ++N ++ C G++ E + ++ +MK +GL PD+ Y ++++ C+ +R
Sbjct: 303 RGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRK 362
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
AK+ ++ G N+ YN LI + G+I GA+ M G+ P TY SL+
Sbjct: 363 AKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMY 422
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
+C ++ A +F+++ ++V L I T MI
Sbjct: 423 WMCHAGLVEEAKTIFSQARENNVDLG-VIGYTIMI 456
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 172/396 (43%), Gaps = 22/396 (5%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLA-VL 164
VLK++K +T Y I +L + ++A + ++ + + N+++A +L
Sbjct: 143 VLKKMKPTAVT-----YNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLL 197
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM----------LDE 214
+++ + + +EM RG+ + + + C+ K + + + + E
Sbjct: 198 QRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKE 257
Query: 215 VRKRENSMIN-----GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
K +M+N S+ ++I G CK ++EEA K+ ++ R KPD + +
Sbjct: 258 ATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLH 317
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
+ +G + E +L + + G+ P Y I G + I +AKE ++
Sbjct: 318 AYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKP 377
Query: 330 DDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
+ + NALIG + D AI M G PT T +L +C +E ++
Sbjct: 378 NVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIF 437
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
N+ + Y +M+ C G++ EA +EM+ +G+ P+ Y +LM A +
Sbjct: 438 SQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKS 497
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
A KL+D+M SG + TY LI++ SE G
Sbjct: 498 GNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEKG 533
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%)
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
K LCK K D E+ L + +YNV++ LC SGR+ EA+ + M++ G+
Sbjct: 19 KALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMT 78
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P V + L+ R + + +M G S N YN LI G ALRL
Sbjct: 79 PSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRL 138
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
F M+ K + P A TY + + LC+E ++ A + ++ + + + +T + L +
Sbjct: 139 FDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQ 198
Query: 553 RV 554
R
Sbjct: 199 RT 200
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/297 (19%), Positives = 116/297 (39%), Gaps = 7/297 (2%)
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
+L +GK ++A V + ++ N ++ D ++ A+K+ +M+ RG +
Sbjct: 248 TLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKP 307
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
F + +C K+ + +LD+++ + V II G CK K + +A +
Sbjct: 308 DLFTFNTLLHAYCNLGKMEETFHLLDQMKTE--GLQPDIVSYGTIIDGHCKAKDIRKAKE 365
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
L EL R KP+ Y + + G + ++ + G+ P Y + +
Sbjct: 366 YLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMC 425
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPT 364
+ EAK + + + +D V+ I G A+ +F M +G P
Sbjct: 426 HAGLVEEAKTI--FSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPN 483
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
T + L K S+E +++ + + D +Y +++ G YG
Sbjct: 484 KLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEKGGKTTQYG 540
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 196/436 (44%), Gaps = 9/436 (2%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSH 182
+I +L +G + A +F +K I P + N ++ L +G +DNA ++ ++M+
Sbjct: 249 VINALCKGGKMENAIELF--MKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTV 306
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-IIHGFCKGKR 241
+GV+ + +G I + +V +LDE+ S N +V+ +I G+CK
Sbjct: 307 KGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMI---GSGFNPNVVVFNNLIDGYCKMGN 363
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+E A K+ D + + P + + + F + E L++ G++ ++
Sbjct: 364 IEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYS 423
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKG 360
+ L + R A ++++S F D +L L+ G A + ++EKG
Sbjct: 424 VVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG 483
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
+ T + L LC K E + K + D +YN ++ C G++ +
Sbjct: 484 SPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCF 543
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+ +EM ++G+ PD+ YN L+ C L A KLWD+ ASG N+ TY I++ +
Sbjct: 544 RLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGY 603
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
+ IE LF+ +L K + ++ Y +++ CQ N+ AA ++ + ++
Sbjct: 604 CKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNC 663
Query: 541 SILSTFMISLCRRVLI 556
+ S+ + +C L+
Sbjct: 664 ATYSSLIHGVCNIGLV 679
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/456 (20%), Positives = 191/456 (41%), Gaps = 44/456 (9%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N T + ++ +S+++ S QI ++ L+++ + +++ ++ L + A
Sbjct: 378 NITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSA 437
Query: 139 FSVFNEV---KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
F + F D+ + L+ L DG A +++ + +G S +
Sbjct: 438 FRFTKMMLSRNFRPSDL---LLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNAL 494
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
I C KL + ++ E+ +R M + A+++ GFC +VE F++ +E+ R
Sbjct: 495 IHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALIL--GFCNEGKVEGCFRLREEMTKR 552
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
+PD Y + +G + + + + + G+ + Y + G RI +
Sbjct: 553 GIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 612
Query: 316 KELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+ L ++S K ++ V N +I + + +A+ M KG +P +T
Sbjct: 613 ENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCAT------- 665
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
Y+ ++ +C G + +A +I EM+++G P+
Sbjct: 666 ----------------------------YSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPN 697
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V Y +L+ C+ + A+ W +M + N TY ++I + ++G +E A L
Sbjct: 698 VVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLI 757
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
M E G+ PD TY L G C+ ++ AF+V ++
Sbjct: 758 KMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQ 793
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 195/442 (44%), Gaps = 5/442 (1%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+ I+ L + +++ + +++ V + + Y +I LI+ K V +E
Sbjct: 279 VTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDE 338
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + + + N+L+ G I+ ALK+ D M + + +++ + FC++ +
Sbjct: 339 MIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQ 398
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP-DFIA 263
+ + L+E+ S+ + +V +H CK R AF+ + R +P D +
Sbjct: 399 IEHAENALEEILSSGLSIHPDNCYSV--VHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLL 456
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+V K + E+ + K A + I GL ++ EA + + ++
Sbjct: 457 TMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTS-NALIHGLCGAGKLPEASRIVKEML 515
Query: 324 SGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+D NALI G + M ++G P + T + L + LC K D
Sbjct: 516 ERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLD 575
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
+ ++++ A+ +++ +Y +M+ C + R+ + + E+ K ++ + YN ++
Sbjct: 576 DAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIII 635
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+A C+ + A +L + M + G N TY+ LI +G +E A L M ++G
Sbjct: 636 KAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFV 695
Query: 503 PDATTYTSLLEGLCQETNLQAA 524
P+ YT+L+ G C+ + A
Sbjct: 696 PNVVCYTALIGGYCKLGQMDTA 717
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 93/169 (55%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
++ +G P + + +N+ LCK K + +E++ + ++ +YN +++ LC +GR
Sbjct: 234 VMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGR 293
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L A+ + ++M KG+ P++ Y +L+ + + + D+M SG + N+ +N
Sbjct: 294 LDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNN 353
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
LI + ++G IEGAL++ M+ K + P + T SL++G C+ ++ A
Sbjct: 354 LIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHA 402
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 103/197 (52%), Gaps = 7/197 (3%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F + KG P+L T + L +L K N+ ++ EV++V+S D+ S+ +++
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGAC-PDVFSFTNVIN 251
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G++ A + +M++ G+ P+V YN ++ C+ L A +L ++M G
Sbjct: 252 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 311
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
NLKTY LI+ ++ + + M+ G P+ + +L++G C+ N++ A ++
Sbjct: 312 NLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKI- 370
Query: 529 NKSVNHDVMLARSILST 545
DVM++++I T
Sbjct: 371 -----KDVMISKNITPT 382
>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 578
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 177/397 (44%), Gaps = 30/397 (7%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV-- 215
N L+ G +D A + ++ G + + F + FC N K+ L + DE+
Sbjct: 93 NILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVA 152
Query: 216 -RKRENSMINGSVIAVLIIHGFCKGK--RVEEAFKVLDELRIRE-CKPDFIAYRIVAEEF 271
R R + ++ G+ +I+G CK K + A ++L ++ R+ KP+ I Y V
Sbjct: 153 RRIRFDDVLYGT-----LINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGL 207
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL----------------IVERRICEA 315
G++ E V+ K G+ P Y I GL + ++ EA
Sbjct: 208 CKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEA 267
Query: 316 KELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+EL V++ D N L+ G + A F+ M+E+G P T + L
Sbjct: 268 RELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHG 327
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
C +K DE ++ + D+ SYN+++ C R+ EA ++++M K L P+
Sbjct: 328 YCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPN 387
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQM-FASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+ YNS+++ C+ + A KL D+M + ++ TYNIL+ + +E A+ F
Sbjct: 388 IITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFF 447
Query: 494 -HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
H + E+ AP+ +Y L+ G C+ L A +FN
Sbjct: 448 KHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFN 484
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 189/421 (44%), Gaps = 24/421 (5%)
Query: 138 AFSVFNEV-KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
AFSV ++ K+ C + +D +D AL ++DEM R + F + +G I
Sbjct: 108 AFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLD-ALYIYDEMVARRIRFDDVLYGTLI 166
Query: 197 WKFCENAKLGQVLSMLDEVRK-RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRI 254
C+ +K+G+ + + ++K E ++ ++I ++HG CK + EA + ++ +
Sbjct: 167 NGLCK-SKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIV 225
Query: 255 RECKPDFIAYRIVA----------------EEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+ PD Y + F L V E + + G +
Sbjct: 226 QGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIIN 285
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMI 357
Y + G + ++ EA++L ++V D L+ ID A F+ MI
Sbjct: 286 YNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMI 345
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
E+G VP + + + L K CK + E + + + + + ++ +YN +V LC SG +
Sbjct: 346 ERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGIL 405
Query: 418 EAYGVIQEMKRKGLDP-DVSFYNSLMEACCREDLLRPAKKLWDQM-FASGCSGNLKTYNI 475
+A+ ++ EM P DV+ YN L+E+ CR + + A + + F + N+ +YNI
Sbjct: 406 DAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNI 465
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LIS + ++ A+ LF++M K + PD TY LL+ L L A + + V+
Sbjct: 466 LISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQG 525
Query: 536 V 536
+
Sbjct: 526 I 526
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 180/406 (44%), Gaps = 42/406 (10%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK-- 217
+L +A Y A+ ++ M ++GV T+ F + I FC ++ S++ ++ K
Sbjct: 60 ILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFSVMGKILKWG 119
Query: 218 -RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF---KL 273
R N V ++ GFC ++ +A + DE+ R + D + Y + K+
Sbjct: 120 CRPNV-----VTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKI 174
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDD 332
+++ K + + V P Y + GL + I EA+ L ++IV G F D
Sbjct: 175 GKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFP-DIF 233
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
++LI + R + ++L C NK DE E++ V+
Sbjct: 234 TYSSLIYGLCRAGQRKEV------------------TSLLNGFCLNNKVDEARELFNVMI 275
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D+ +YN++++ C + ++ EA + M +G PD Y LM C D +
Sbjct: 276 ERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVD 335
Query: 453 PAKKLWDQMFASGCSGNLKTYNILIS---KFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
A+ L+ M G ++ +YNILI KF VGE A+ L +M K + P+ TY
Sbjct: 336 EARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGE---AMNLLEDMFLKNLVPNIITYN 392
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI---SLCR 552
S+++GLC+ + A+++ ++ H ++T+ I SLCR
Sbjct: 393 SVVDGLCKSGGILDAWKLVDEM--HYCCQPPPDVTTYNILLESLCR 436
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 171/379 (45%), Gaps = 23/379 (6%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML----- 212
N+++ L DG I+ A + +M +G+ + I+ C + +V S+L
Sbjct: 201 NTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCL 260
Query: 213 ----DEVRKRENSMI-----NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
DE R+ N MI + + ++++G+C +V EA K+ + R +PD I
Sbjct: 261 NNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTIT 320
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y I+ + L+ V E + + G+ P Y I G R+ EA L E +
Sbjct: 321 YTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMF 380
Query: 324 SGKFTID----DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+ + V++ L S +D + ++ + P ++T + L ++LC+
Sbjct: 381 LKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPP--PDVTTYNILLESLCRIE 438
Query: 380 KSDELVEVYKVLSANDYFT-DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
++ + +K L F ++ SYN+++S C + RL EA + M K L PD+ Y
Sbjct: 439 CVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTY 498
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
N L++A L A L Q+ G S NL+TYNILI+ + G + A ++ +
Sbjct: 499 NILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSI 558
Query: 499 KGVAPDATTYTSLLEGLCQ 517
+G PD TY ++ LC+
Sbjct: 559 RGYHPDVKTY--IINELCK 575
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 104/214 (48%), Gaps = 5/214 (2%)
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
SID A+ F+ M++ +P++ + + + K +++Y ++
Sbjct: 33 DSID--DAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTV 90
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
++N++++ C G++ A+ V+ ++ + G P+V + +LM+ C D + A ++D+M
Sbjct: 91 TFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEM 150
Query: 462 FASGCSGNLKTYNILISKF--SEVGEIEGALRLFHNMLEKG-VAPDATTYTSLLEGLCQE 518
A + Y LI+ S++G+ A++L M E+ V P+ Y +++ GLC++
Sbjct: 151 VARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKD 210
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
N+ A + +K + + S+ + LCR
Sbjct: 211 GNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCR 244
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 61/142 (42%)
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C + +A + M P + + ++ + A L+ M G
Sbjct: 30 CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
T+NILI+ F +G+++ A + +L+ G P+ T+T+L++G C + A ++++
Sbjct: 90 VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149
Query: 531 SVNHDVMLARSILSTFMISLCR 552
V + + T + LC+
Sbjct: 150 MVARRIRFDDVLYGTLINGLCK 171
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 178/399 (44%), Gaps = 7/399 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N ++A + G +A+++FDEM+ R V + I + I + L + D++
Sbjct: 204 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVC 263
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + ++ +++ G C+ R+ E +LDE+ ++ PD Y I+ + G
Sbjct: 264 --HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 321
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFIL--GLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ K K GV DY IL GL + ++ A+E+ + +V+ + N
Sbjct: 322 KAMLSLFGKYLKNGVT--IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYN 379
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
LI G + + A F M + P T + L LCK + ++ + N
Sbjct: 380 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 439
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+E++N ++ +G+L + + V+ EM+ GL P+V Y S++ A C+ + A
Sbjct: 440 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 499
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+ D MF N + YN +I + E G + A L M G++P TY L++G
Sbjct: 500 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 559
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
LC ++ + A E+ N NH ++ +T + + C R
Sbjct: 560 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYR 598
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/416 (21%), Positives = 180/416 (43%), Gaps = 3/416 (0%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+ +L L + ++ ++L ++ K+ D Y + L + +++ S+F +
Sbjct: 271 ITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGK 330
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
N IG C+ LL L DG + A ++ + + G+ + + + I +C+ +
Sbjct: 331 YLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGE 390
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L S +++ R + + +I+G CK +R+ A +L E++ P +
Sbjct: 391 LEGAFSTFGQMKSRH--IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 448
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + + G + + +VL + ++ G+ P Y + +I EA + + +
Sbjct: 449 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 508
Query: 325 GKFTIDDDVLNALIGSVSSIDPR-SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ V NA+I + P A + M G P++ T + L K LC +++ E
Sbjct: 509 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISE 568
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
E+ LS + D SYN ++S C G + +A + Q M + G+ V Y+ L+
Sbjct: 569 AEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLIS 628
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
L + L+ +M + + +NI++ +S+ G A L ML+K
Sbjct: 629 GLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 684
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/425 (20%), Positives = 170/425 (40%), Gaps = 7/425 (1%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFD 178
Y +I I+G + + F + +++ C + P N LL+ L G + + D
Sbjct: 237 TYNTMIDGHIKGGDLEAGFRLRDQMV--CHGLKPNAITYNVLLSGLCRAGRMGETSALLD 294
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
EM+ + + + + N +LS+ + K N + G ++++G CK
Sbjct: 295 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLK--NGVTIGDYTCSILLNGLCK 352
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+V A +VL L P + Y + + G + + + + P
Sbjct: 353 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHIT 412
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMI 357
Y I GL RI A++L + + N LI + + + M
Sbjct: 413 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 472
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
E G P + + ++ CK K E V + + D + + YN ++ G
Sbjct: 473 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPND 532
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+A+ ++++MK G+ P + YN L++ C + + A+++ + + + +YN LI
Sbjct: 533 QAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 592
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
S G I+ AL L M + G+ TY L+ GL L ++ K + ++V+
Sbjct: 593 SACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVV 652
Query: 538 LARSI 542
+ +I
Sbjct: 653 PSNAI 657
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
SYNV+++ + +GR +A V EM + + P+ YN++++ + L +L DQM
Sbjct: 202 SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 261
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G N TYN+L+S G + L M + + PD TY+ L +GL + +
Sbjct: 262 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 321
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+A +F K + + V + S + LC+
Sbjct: 322 KAMLSLFGKYLKNGVTIGDYTCSILLNGLCK 352
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 3/175 (1%)
Query: 346 PRSAIVFFNFMIEKGR--VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
P A+ + + ++ R +P+LS+ + L + L + ++ + +L++ D ++
Sbjct: 108 PDGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAW 167
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF-YNSLMEACCREDLLRPAKKLWDQMF 462
N V +G L EA G+++ M R G P +F YN ++ R A +++D+M
Sbjct: 168 NKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMT 227
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
N TYN +I + G++E RL M+ G+ P+A TY LL GLC+
Sbjct: 228 ERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCR 282
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 203/484 (41%), Gaps = 48/484 (9%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S ++Y I+ S + A D + K TL++S+Y II + Q N ++A ++
Sbjct: 378 SLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALV 437
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYI-----DNALKMFDEMSHRGVEFSTIGFGVFIW 197
E++ D I ++++ DGY L +F + G + + +G I
Sbjct: 438 REMEEEGIDAPIAIYHTMM-----DGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLIN 492
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
+ + K+ + L + V K E N + ++I+GF K K AF V +++
Sbjct: 493 LYTKVGKISKALE-VSRVMKEEGVKHNLKTYS-MMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL--------------------------- 290
KPD I Y + F MG++ +K+ +KL
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Query: 291 --------GVAPRTNDYREFILGLIVERRICEAKE-LGEVIVSGKFTIDDDVLNALIGSV 341
G P + + I GL+ +R++ +A E L E+ ++G + + G
Sbjct: 611 VFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYA 670
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
S D A +F + +G + T L K CK + + V K +SA + +
Sbjct: 671 SVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 730
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
YN+++ G + EA +IQ+MK++G+ PD+ Y S + AC + + A + ++M
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM 790
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
A G N+KTY LI ++ E AL + M G+ PD Y LL L ++
Sbjct: 791 EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASI 850
Query: 522 QAAF 525
A+
Sbjct: 851 AEAY 854
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 155/373 (41%), Gaps = 3/373 (0%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
I SL+ A +D AL +M G+E S + + V + F + DE
Sbjct: 346 IYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEA 405
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
KR + +N S+ II+ C+ +E A ++ E+ Y + + + ++
Sbjct: 406 -KRIHKTLNASIYGK-IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVA 463
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ VV K+ ++ G P Y I +I +A E+ V+ + +
Sbjct: 464 DEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYS 523
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I G V D +A F M+++G P + +N+ C D ++ K +
Sbjct: 524 MMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL 583
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ ++ ++ SG +R + V M+R G P V +N L+ + + A
Sbjct: 584 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKA 643
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++ D+M +G S N TY ++ ++ VG+ A F + +G+ D TY +LL+
Sbjct: 644 VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKA 703
Query: 515 LCQETNLQAAFEV 527
C+ +Q+A V
Sbjct: 704 CCKSGRMQSALAV 716
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/381 (19%), Positives = 153/381 (40%), Gaps = 44/381 (11%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
FG+ + + + + + +R R + S I +IH + G+ ++EA + +
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRAR--GITPTSRIYTSLIHAYAVGRDMDEALSCVRK 369
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI---- 307
++ + + Y ++ F G + + +++ + Y + I
Sbjct: 370 MKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCN 429
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
+ER +E+ E + I +++ G D + +V F + E G PT+ T
Sbjct: 430 MERAEALVREMEEEGIDAPIAIYHTMMD---GYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
L K K + +EV +V+ ++++Y++M++ A+ V ++M
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 428 RKGLDPDVSFYNSLMEACC-----------------------------------REDLLR 452
++G+ PDV YN+++ A C + +R
Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 606
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
+ +++D M GC + T+N LI+ E ++E A+ + M GV+ + TYT ++
Sbjct: 607 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 666
Query: 513 EGLCQETNLQAAFEVFNKSVN 533
+G + AFE F + N
Sbjct: 667 QGYASVGDTGKAFEYFTRLQN 687
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/317 (18%), Positives = 123/317 (38%), Gaps = 14/317 (4%)
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
H KS + R + D + + V + + +I L++ + +KA + +E+
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTV----HTFNGLINGLVEKRQMEKAVEILDEMTL 652
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
++ AS G A + F + + G++ + + C++ ++
Sbjct: 653 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 712
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
L++ E+ R ++ S + ++I G+ + V EA ++ +++ KPD Y
Sbjct: 713 ALAVTKEMSAR--NIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSF 770
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL----IVERRICEAKELGEVIV 323
G + +++ LGV P Y I G + E+ + +E+ + +
Sbjct: 771 ISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 830
Query: 324 SGKFTIDDDVLNALIGSVSSIDP---RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ +L +L+ S + + M+E G + + T + SK LCK
Sbjct: 831 KPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEA 890
Query: 381 S-DELVEVYKVLSANDY 396
S EL E + D+
Sbjct: 891 SGGELTETLQKTFPPDW 907
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 161/395 (40%), Gaps = 41/395 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L + + A KM DEM+ +G + + + C+ L LDE +
Sbjct: 163 NLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCK-------LDRLDEATE 215
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+M + I+ C+ R++E F V+ ++ R +P+ I Y + + F G +
Sbjct: 216 VLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGEL 275
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+L + G P + + GL + R+ +A ++
Sbjct: 276 RMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDM------------------- 316
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
+ +M+ +G P+ + + L + LC + + + F
Sbjct: 317 ---------------WRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCF 361
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
++ +Y+ ++ +G L A + +M R G P+V Y ++++ C++ + AK L
Sbjct: 362 PNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSL 421
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
D+M C N T+N LI + + AL +FH M G P+ TY L+ GL +
Sbjct: 422 IDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFR 481
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
E N A + + +H + L+ +T + LC+
Sbjct: 482 EGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQ 516
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 181/443 (40%), Gaps = 62/443 (13%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY++I+ +L ++ + SV+ + V R + P++I AF E+
Sbjct: 226 SYNAIVLALCREFRMQEVFSVVSDM----------VGRGLQPNVITYTTIVDAFCKAGEL 275
Query: 146 KFNCEDIG--------PEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
+ C + P + +L+ L DG + +AL M+ M G ST+ + +
Sbjct: 276 RMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNIL 335
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
I C L S+L+ + ++ N + LI GF K + A + +++
Sbjct: 336 IRGLCSVGDLKGASSILNSM-EQHGCFPNVRTYSTLI-DGFSKAGDLGGAISIWNDMSRS 393
Query: 256 ECKPDFIAYRIVAEEF--KLMGSVFEREVVLKKKRKL-GVAPRTNDYREFILGLIVERRI 312
CKP+ + Y + + F KLM F + L K L P T + I R +
Sbjct: 394 GCKPNVVVYTNMVDVFCKKLM---FNQAKSLIDKMLLENCPPNTVTFNTLI------RSL 444
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
C+ + +G A+ F+ M G VP T + L
Sbjct: 445 CDCRRVGR----------------------------ALGVFHEMRRHGCVPNGRTYNELI 476
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
L + + + + + ++ + +YN +VS LC + REA + +M +G+
Sbjct: 477 HGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQ 536
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P+ +++++ A C+E +R A + M C N+ Y IL+++ ++ A+
Sbjct: 537 PNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTY 596
Query: 493 FHNMLEKGVAPDATTYTSLLEGL 515
ML +G+ P+ T+ L+ G+
Sbjct: 597 LLKMLYEGIYPNTVTWNVLVRGV 619
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 30/183 (16%)
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD- 434
C N +V VY + + ++ +YN++V LC + R+ A ++ EM RKG PD
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194
Query: 435 -----------------------------VSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+ YN+++ A CRE ++ + M G
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRG 254
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
N+ TY ++ F + GE+ A + M+ G P+ T+T+L+ GL + + A
Sbjct: 255 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDAL 314
Query: 526 EVF 528
+++
Sbjct: 315 DMW 317
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
CC E+++ ++D M G N+ TYN+L+ + + A ++ M KG PD
Sbjct: 134 CCGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPD 193
Query: 505 ATTYTSLLEGLCQETNLQAAFEVF 528
TY +++ LC+ L A EV
Sbjct: 194 DVTYATIVSVLCKLDRLDEATEVL 217
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 43/237 (18%), Positives = 92/237 (38%), Gaps = 3/237 (1%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL + W + + S +SY+ +++ L + S+L ++ + + Y +I
Sbjct: 313 ALDMWRWMVAE-GWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLI 371
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVE 186
+ + A S++N++ + + +++ V + A + D+M
Sbjct: 372 DGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCP 431
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
+T+ F I C+ ++G+ L + E+R R + NG L IHG + +A
Sbjct: 432 PNTVTFNTLIRSLCDCRRVGRALGVFHEMR-RHGCVPNGRTYNEL-IHGLFREGNCGDAL 489
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
++ E++ + + Y V E V + K G+ P + I
Sbjct: 490 HMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAII 546
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/475 (22%), Positives = 207/475 (43%), Gaps = 36/475 (7%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVN----KITLDSSVYRFIIPSLIQGKNTQKAFSV 141
S++++L + +R+ + D+ + +I + Y ++ SL + +A ++
Sbjct: 122 SHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTL 181
Query: 142 FNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
F+ ++ C + P+ ++L++ + +DNAL + DEM V+ + + +
Sbjct: 182 FDSLR--CRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGC 239
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
N + + + + +++ + + N + V++ G CK +EA V + + +P
Sbjct: 240 FRNGEFEKAMRVWEQLVRDPGASPNLATYNVML-DGLCKLGMFKEAGDVWERMVANNHQP 298
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D I Y + V V + K G+ P Y + G C A +G
Sbjct: 299 DMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGF------CHAGRVG 352
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGR------------VPTLST 367
E + KF D + + I +V+S + +F M++K P + T
Sbjct: 353 E---AWKFW--DSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVT 407
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
S + LC++ +++ +++ + + D SY+ M+S LC GRL +A + +++
Sbjct: 408 FSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKIS 467
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
P+ YN+L+ C+ A +++ QM + CS TYN LI + +
Sbjct: 468 MDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYL 527
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN----KSVNHDVML 538
A R MLEKG D TY SL+ GLC++ + A ++N K + DV++
Sbjct: 528 EASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVM 582
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 183/441 (41%), Gaps = 53/441 (12%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSH----RGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
N+LL +A F +SH R + + + + + C L + +++ D
Sbjct: 124 NALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFD 183
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE---- 269
+R R + + ++ GF K R++ A +LDE+ E +PD + Y +
Sbjct: 184 SLRCR--GLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFR 241
Query: 270 --EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
EF+ V+E+ V R G +P Y + GL EA ++ E +V+
Sbjct: 242 NGEFEKAMRVWEQLV-----RDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNH 296
Query: 328 TIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK--------- 377
D +I G S D SA ++ MI+ G VP + ++L K C
Sbjct: 297 QPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWK 356
Query: 378 ----------RNKS---------------DELVEVYKVLSANDYFT-DMESYNVMVSFLC 411
RN + D+ +++++L +D + DM +++ M+ LC
Sbjct: 357 FWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLC 416
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
G ++ +++E + G + D Y+S++ C++ L A KL++++ N
Sbjct: 417 EKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSH 476
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
YN LI+ F + + A+R++ M E +P TY +L+ GLC+ A +
Sbjct: 477 IYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREM 536
Query: 532 VNHDVMLARSILSTFMISLCR 552
+ ML + + + LCR
Sbjct: 537 LEKGCMLDVNTYGSLIRGLCR 557
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/502 (21%), Positives = 197/502 (39%), Gaps = 52/502 (10%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++ + +++ +L ++ ++ D+ Y ++ + +KA V+ +
Sbjct: 195 ITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQ 254
Query: 145 VKFNCEDIG--PEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+ D G P + N +L L G A +++ M + I +G I C
Sbjct: 255 L---VRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLC 311
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK-- 258
+ + + E+ K ++ VI ++ GFC RV EA+K D + + +
Sbjct: 312 RSTDVDSAARVYSEMIK--TGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNV 369
Query: 259 ---------------------------------PDFIAYRIVAEEFKLMGSVFEREVVLK 285
PD + + + G + +L+
Sbjct: 370 TSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILE 429
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID 345
+ R G Y I GL + R+ +A +L E I F + + NALI
Sbjct: 430 EARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQAS 489
Query: 346 PRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
S AI ++ M E PT T + L LCK K E + + D+ +Y
Sbjct: 490 KFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYG 549
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF-A 463
++ LC ++ A + ++ KGL DV +N L+ C + A +L +M
Sbjct: 550 SLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEK 609
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
+ C N+ TYN L+ F E G + A L+ +LE G+ PD +Y + ++GLC
Sbjct: 610 NNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPE 669
Query: 524 AFEVFNKSVNHDVMLARSILST 545
++ N+ MLA I+ T
Sbjct: 670 GVQLLNE------MLASGIIPT 685
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/449 (20%), Positives = 187/449 (41%), Gaps = 4/449 (0%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
+ P + + +Y+ +L L V +++ N D Y +I L + +
Sbjct: 257 RDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDV 316
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
A V++E+ I NSLL G + A K +D MS G+ T + +
Sbjct: 317 DSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVT-SYNIM 375
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
+ + + + + E+ ++++S+ V +IHG C+ ++ ++L+E R
Sbjct: 376 LKGLFDGGMVDKATDLW-ELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTS 434
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
+ D +Y + G + + + +K P ++ Y I G + +A
Sbjct: 435 GKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDA 494
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSIDPR-SAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+ + + N LI + + A F M+EKG + ++T +L +
Sbjct: 495 IRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRG 554
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG-LDP 433
LC+ K D + ++ + TD+ +N+++ LC++G++ EA ++ EMK K P
Sbjct: 555 LCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCP 614
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+V YN+LM+ A LW + +G ++ +YN I ++L
Sbjct: 615 NVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLL 674
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
+ ML G+ P A T+ L+ + + +Q
Sbjct: 675 NEMLASGIIPTAITWNILVRAVIKYGPIQ 703
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/498 (21%), Positives = 211/498 (42%), Gaps = 42/498 (8%)
Query: 81 THSPLSYHSILKSL--SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
T S + ++ IL SL S + S+ ++++ + IT D + +I A
Sbjct: 63 TSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFA 122
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
FS+ ++ + N+L+ L +G + AL D + G +G I
Sbjct: 123 FSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLING 182
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAV---------------------------- 230
C K+G+ + L +RK + ++ +V+
Sbjct: 183 LC---KIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKI 239
Query: 231 --------LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+I+GFC ++EEAF + E+ ++ PD+ + I+ + G++ +
Sbjct: 240 SPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKN 299
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+L K GV P Y + G + ++ +AK + I + +I
Sbjct: 300 MLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFC 359
Query: 343 SID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
I A+ FN M KG P T ++L LCK + E+ + N ++
Sbjct: 360 KIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIF 419
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN ++ LC + + +A +++++K +G+ PD+ +N L+ C+ L+ A+ ++ +
Sbjct: 420 TYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDL 479
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ G S N TYNI+++ + G + A L M + G+ PDA TY +L++ L +
Sbjct: 480 LSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDEN 539
Query: 522 QAAFEVFNKSVNHDVMLA 539
+ A ++ + + DV+ A
Sbjct: 540 EKAEKLLREMIARDVVYA 557
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 100/196 (51%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
+++ G P T + L K LC K E + + + A + D SY +++ LC G
Sbjct: 129 ILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGE 188
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
R A +++++ K + +V YN+++++ C+ L+ A +L+ QM A S ++ T++
Sbjct: 189 TRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSA 248
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI F VG++E A LF M+ K + PD T+ L++ LC+E NL+ A + +
Sbjct: 249 LIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEG 308
Query: 536 VMLARSILSTFMISLC 551
VM S+ M C
Sbjct: 309 VMPNVVTYSSLMDGYC 324
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 174/403 (43%), Gaps = 17/403 (4%)
Query: 64 HSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
H LALGF SY +++ L + +L+++ + ++ +Y
Sbjct: 163 HVLALGF----------HLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYN 212
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMS 181
II SL + K A+ +++++ + I P++ ++L+ G ++ A +F EM
Sbjct: 213 TIIDSLCKHKLVIDAYELYSQMI--AKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMV 270
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
+ + F + + C+ L +ML V +E M N + L+ G+C +
Sbjct: 271 LKNINPDYYTFNILVDALCKEGNLKGAKNML-VVMMKEGVMPNVVTYSSLM-DGYCLVNQ 328
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
V +A VL+ + P+ +Y + F + V E + + G+AP Y
Sbjct: 329 VNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNS 388
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKG 360
I GL RI A EL + + + N LI ++ + AI + ++G
Sbjct: 389 LIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQG 448
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P + T + L LCK + +V++ L + Y + +YN+MV+ LC G EA
Sbjct: 449 IQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAE 508
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
++ +M G+ PD Y +L++A +D A+KL +M A
Sbjct: 509 ALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIA 551
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 62/133 (46%)
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+ ++ G+ PD+ +N L+ C + A + ++ G + T+N LI
Sbjct: 92 RRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLN 151
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
G+++ AL ++L G D +Y +L+ GLC+ + A ++ K V + +
Sbjct: 152 GKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMY 211
Query: 544 STFMISLCRRVLI 556
+T + SLC+ L+
Sbjct: 212 NTIIDSLCKHKLV 224
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/482 (20%), Positives = 210/482 (43%), Gaps = 39/482 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y++++ L + + + D + K++ + + Y +I +L + + A +F++
Sbjct: 362 FAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDK 421
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ + NSL+ G +D A + M G+ + + I C N
Sbjct: 422 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGD 481
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + + E+ +R + N + A +I+GFCK K+++EA ++ D++ P+ + +
Sbjct: 482 LSSCMELHREMAERGIAWNNYTFTA--LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 539
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
++ E + L+G++ + + + ++G+ P YR I GL + + +A E + +
Sbjct: 540 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 599
Query: 325 GKFTIDDDVLNALI------------------------------------GSVSSIDPRS 348
+++ L AL+ ++ D
Sbjct: 600 SYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 659
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
+ V F M E+G P + + L K + + + + + Y + ++ V+++
Sbjct: 660 SCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLIN 719
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC SG L A + +EM + P+ YN ++ E + AK L M G
Sbjct: 720 NLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLA 778
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ ++NILI + G+I+ A+ L + E G +PD +Y++++ LC+ ++ AFE++
Sbjct: 779 SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELW 838
Query: 529 NK 530
N+
Sbjct: 839 NE 840
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 166/369 (44%), Gaps = 19/369 (5%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A +FD+M GV + I +CE+ L ++ VR + +V ++
Sbjct: 205 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV--VRMESEGVKASAVPYNVL 262
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR---K 289
++G CK RV+EA +V + + D + YR + F M E E+ L+ +
Sbjct: 263 MYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRME---ELEMALRITHDMIR 319
Query: 290 LGVAPRTNDYREFILGL----IVERRICEAKELGEV-IVSGKFTIDDDVLNALIGSVSSI 344
LG P + I L +VE A +LG++ +V F NALI +
Sbjct: 320 LGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFA-----YNALIDKLCKN 374
Query: 345 DP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ A F M +G P T + L LCKR ++ + ++ + + Y
Sbjct: 375 ERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPY 434
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N +++ C G L A G++ M ++GL P + Y+ L+ CR L +L +M
Sbjct: 435 NSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAE 494
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G + N T+ LI+ F + +++ A RLF M++ V P+ T+ ++EG C N++
Sbjct: 495 RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRK 554
Query: 524 AFEVFNKSV 532
AF+++++ V
Sbjct: 555 AFQLYDQMV 563
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 183/435 (42%), Gaps = 90/435 (20%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+A L +G + + +++ EM+ RG+ ++ F I FC++ K+ + + D++ +
Sbjct: 472 LIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI--D 529
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+++I V ++I G+C + +AF++ D++ KPD YR + L V
Sbjct: 530 SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGV-- 587
Query: 280 REVVLKKKRKLGVAPRTNDY--------REFILGLIVERRICEAKEL-GEVIVSG----- 325
K VA N Y + G E R E L E+ V G
Sbjct: 588 ------SKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDL 641
Query: 326 -KFTI----------------------------DDDVLNALIGSVSSIDPR-SAIVFFNF 355
FTI DD +I ++S + A+ ++
Sbjct: 642 VSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQ 701
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRN--KSDELVEVYKVLSAN------------DYFT--- 398
M+ G P T + L NLCK S EL+ ++L+ N DYF
Sbjct: 702 MVVDGYSPNTVTHTVLINNLCKSGYLGSAELL-CKEMLAGNVLPNKFTYNCFLDYFATEG 760
Query: 399 DME------------------SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
DME S+N+++ LC +G+++EA ++ ++ G PD Y++
Sbjct: 761 DMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYST 820
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
++ C+ + A +LW++M G ++ YNI I + GE + AL ++ NM+ G
Sbjct: 821 IIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSG 880
Query: 501 VAPDATTYTSLLEGL 515
V P+ TY +LL G+
Sbjct: 881 VQPNWDTYRALLSGI 895
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 167/366 (45%), Gaps = 19/366 (5%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D A + M GV+ S + + V ++ C+N ++ + + + +N M+N V A
Sbjct: 237 LDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEV-------KNVMVNIGVTA 289
Query: 230 -----VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+++GFC+ + +E A ++ ++ P + +E + V E +
Sbjct: 290 DEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLA 349
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
K LG+ P Y I L R +A L + + +G+ ++V A++ + ++
Sbjct: 350 CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEM-AGRGLEPNEVTYAIL--IHAL 406
Query: 345 DPRS----AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
R A+ F+ M +KG T+ ++L CK+ D + +
Sbjct: 407 CKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTA 466
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
SY+ +++ LC +G L + +EM +G+ + + +L+ C++ + A +L+D+
Sbjct: 467 ASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDK 526
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M S N T+N++I + VG I A +L+ M+E G+ PD TY SL+ GLC +
Sbjct: 527 MIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSG 586
Query: 521 LQAAFE 526
+ A E
Sbjct: 587 VSKANE 592
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 1/263 (0%)
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSA 349
GV Y + GL R+ EA E+ V+V+ T D+ L+ ++ A
Sbjct: 251 GVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMA 310
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ + MI G VP+ + S + L K+ +E + L ++ +YN ++
Sbjct: 311 LRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDK 370
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC + R +A + +EM +GL+P+ Y L+ A C+ ++ A L+D+M G
Sbjct: 371 LCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVT 430
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ YN LI+ + + G ++ A L M+++G+ P A +Y+ L+ GLC+ +L + E+
Sbjct: 431 VYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHR 490
Query: 530 KSVNHDVMLARSILSTFMISLCR 552
+ + + + C+
Sbjct: 491 EMAERGIAWNNYTFTALINGFCK 513
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 161/407 (39%), Gaps = 45/407 (11%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N + ++++ +++ L I + Q+ + D+ YR SLI G
Sbjct: 531 NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYR----SLISGLCLTSG 586
Query: 139 FSVFNEVKFNCEDIGPEICN-SLLAVLAS---DGYIDNALKMFDEMSHRGVEFSTIGFGV 194
S NE + E+ + N SL A+L +G ++DEM+ RGV+ + F +
Sbjct: 587 VSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTI 646
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
++ + + + E++ E + + +I K + + +A D++ +
Sbjct: 647 IVYAALKQHDKEKSCVLFREMK--EQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVV 704
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
P+ + + ++ G + E++ K+ V P Y F+ E + +
Sbjct: 705 DGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEK 764
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
AK+L ++ G ++IV FN +I K
Sbjct: 765 AKDLHSAMLQGHL--------------------ASIVSFNILI---------------KG 789
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK K E +++ ++ + + D SY+ ++ LC G + +A+ + EM KGL PD
Sbjct: 790 LCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPD 849
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
V YN + C A ++ M SG N TY L+S S
Sbjct: 850 VVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGIS 896
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 35/186 (18%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR-----------EDLL 451
YNV++ LC + R++EA V M G+ D Y +L+ CR D++
Sbjct: 259 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 318
Query: 452 R----PA-------------KKLWDQMFASGCS-------GNLKTYNILISKFSEVGEIE 487
R P+ K+L ++ F+ C N+ YN LI K + +
Sbjct: 319 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFD 378
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
A RLF M +G+ P+ TY L+ LC+ ++ A +F+K + + + ++ +
Sbjct: 379 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 438
Query: 548 ISLCRR 553
C++
Sbjct: 439 NGYCKQ 444
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A + +M + G+ D Y + + A C L A+ L +M + G + YN+L+
Sbjct: 205 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 264
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+ ++ A+ + + M+ GV D TY +L+ G C+ L+ A + HD++
Sbjct: 265 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALR-----ITHDMIR 319
Query: 539 ARSILS----TFMISLCRR 553
+ S +FMI R+
Sbjct: 320 LGFVPSEANCSFMIDELRK 338
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 211/491 (42%), Gaps = 54/491 (10%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+++S++ + + +++ VL +++ K + + I + + +KA +F+ +
Sbjct: 62 TFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRM 121
Query: 146 --KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDE-MSHRGVEFS--TIGFGVFIWKFC 200
+F C+ NS+L V+ +G AL+ ++ + +GV S + F + I C
Sbjct: 122 AYEFECKRTVKSF-NSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMC 180
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
K+G V + R S V ++ G CK R++EA +LDE++I C P
Sbjct: 181 ---KVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFP 237
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
+ + ++ G + ++ G AP Y I GL ++ ++ +A L
Sbjct: 238 SPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLL 297
Query: 320 EVIVSGKFTID----DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ +VS K + ++N L+ ++D + M E+G S L L
Sbjct: 298 DRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLAL---MEERGYHVNEYVYSALISGL 354
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
K KS E ++++K ++ + + Y+ ++ LC G+ EA V+ EM P+
Sbjct: 355 FKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNA 414
Query: 436 SFYNSLM---------------------------EAC--------CREDLLRPAKKLWDQ 460
Y+SLM E C C++ ++ A +W Q
Sbjct: 415 YTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQ 474
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML--EKGVAPDATTYTSLLEGLCQE 518
M GC ++ Y +I+ S G +E AL+L++ ML E PD TY LL LC++
Sbjct: 475 MLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQ 534
Query: 519 TNLQAAFEVFN 529
+++ A ++ N
Sbjct: 535 SSISRAIDLLN 545
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 193/454 (42%), Gaps = 42/454 (9%)
Query: 67 ALGFFNW--ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
AL F+N ++ N + + L+++ ++K++ ++ + + + V+K D Y
Sbjct: 150 ALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCT 209
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
++ L + +A S+ +E++ + P N L+ L G + K+ D M +G
Sbjct: 210 LMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKG 269
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
+ + + I C KL + +S+LD R + + V II+G K R +
Sbjct: 270 CAPNEVTYNTLIHGLCLKGKLEKAISLLD--RMVSSKCVPNVVTYGTIINGLVKQGRALD 327
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
+VL + R Y + E V Y I
Sbjct: 328 GARVLALMEER-------GYHV-------------NEYV---------------YSALIS 352
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVP 363
GL E + EA +L + + + ++ V +A+I G P A+ + M P
Sbjct: 353 GLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKP 412
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
T S+L K + + +E++K ++ +++ + Y+V++ LC G+++EA V
Sbjct: 413 NAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVW 472
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS--GCSGNLKTYNILISKFS 481
+M KG PDV Y S++ L+ A +L+++M ++ TYNIL++
Sbjct: 473 AQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALC 532
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ I A+ L ++ML++G PD T L L
Sbjct: 533 KQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTL 566
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F M P + T L LCK ++ DE V + + + F ++NV+++
Sbjct: 188 AVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLIN 247
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G L ++ M KG P+ YN+L+ C + L A L D+M +S C
Sbjct: 248 GLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVP 307
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ TY +I+ + G R+ M E+G + Y++L+ GL +E Q A ++F
Sbjct: 308 NVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLF 367
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
+ + L + S + LCR
Sbjct: 368 KEMTVKECELNTIVYSAVIDGLCR 391
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 127/322 (39%), Gaps = 34/322 (10%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
L+I CK V++A ++ ++ + +C+PD Y + + + E +L + +
Sbjct: 174 LVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQID 233
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
G P + I GL C+ +L V
Sbjct: 234 GCFPSPVTFNVLINGL------CKKGDLARVAK--------------------------- 260
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ M KG P T + L LC + K ++ + + + ++ ++ +Y +++ L
Sbjct: 261 -LVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGL 319
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
GR + V+ M+ +G + Y++L+ +E + A +L+ +M C N
Sbjct: 320 VKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNT 379
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
Y+ +I G+ + AL + M P+A TY+SL++G + N A E++
Sbjct: 380 IVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKD 439
Query: 531 SVNHDVMLARSILSTFMISLCR 552
H+ S + LC+
Sbjct: 440 MAKHNFTQNEVCYSVLIHGLCK 461
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 177/412 (42%), Gaps = 46/412 (11%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYI----DNALKMFD 178
I+ SL++ K+ S+ +++F I P + CN L+ G I A D
Sbjct: 92 ILGSLVKSKHYHTVLSLSQKMEF--RGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHD 149
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN-GSVIAVLIIHGFC 237
++ G + +G I C K+G+ + LD +++ + ++ +V+ +I+G C
Sbjct: 150 KLVALGFHLDQVSYGTLIHGLC---KVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMC 206
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K K V +AF + E+ + P+ + Y + F ++G + + + K + P
Sbjct: 207 KDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGY 266
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMI 357
+ + G +R++ E K + F M+
Sbjct: 267 TFNILVDGFCKDRKMKEGKTV----------------------------------FAMMM 292
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
++G +P + T ++L C + + ++ ++ D+ SYN++++ C ++
Sbjct: 293 KQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVD 352
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+A + EM K + P+V YNSL++ + + A +L DQM G N+ TYN +I
Sbjct: 353 KAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSII 412
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ +++ A+ L ++G+ P TYT L++GLC+ +N
Sbjct: 413 DALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYN 464
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 146/321 (45%), Gaps = 13/321 (4%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG----SVFEREVVLKKK 287
I+ K K + ++ R KP+ I+ F +G + + + K
Sbjct: 92 ILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKL 151
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVI--VSGKFTIDDDVL--NALIGSVSS 343
LG Y I GL ++ E + +++ V GK + V+ + G
Sbjct: 152 VALGFHLDQVSYGTLIHGLC---KVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKD 208
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
A ++ M+ KG P + T S L K + ++++ + + D ++
Sbjct: 209 KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTF 268
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N++V C +++E V M ++G+ PDV YNSLM+ C + AK +++ M
Sbjct: 269 NILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQ 328
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G + ++++YNILI+ F ++ +++ A+ LF+ M K + P+ TY SL++GL + +
Sbjct: 329 GGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISY 388
Query: 524 AFEVFNKSVNHDVMLARSILS 544
A ++ ++ HD + +IL+
Sbjct: 389 ALQLVDQM--HDRGVPPNILT 407
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 163/401 (40%), Gaps = 44/401 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N +L L + L + +M RG++ + + I+ FC+ LG + + +
Sbjct: 90 NKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQ---LGLIPCQIHQAFL 146
Query: 218 RENSMIN-----GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
+ ++ V +IHG CK V E LD L+ +
Sbjct: 147 FHDKLVALGFHLDQVSYGTLIHGLCK---VGETRAALDLLQ------------------R 185
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
+ G + + V+ Y I G+ ++ + +A +L +VS + +
Sbjct: 186 VDGKLVQLNAVM--------------YNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVV 231
Query: 333 VLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
+ALI + + AI FN +I + P T + L CK K E V+ ++
Sbjct: 232 TYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMM 291
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
D+ +YN ++ C + A + M + G++PD+ YN L+ C+ +
Sbjct: 292 MKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKV 351
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A L+++M N+ TYN LI S+ G I AL+L M ++GV P+ TY S+
Sbjct: 352 DKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSI 411
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++ L + + A + K + + + + + LC+
Sbjct: 412 IDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCK 452
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 115/267 (43%), Gaps = 40/267 (14%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSV 106
L +V++ I+P ++T+ +L GFF + + +AID +
Sbjct: 217 LYSEMVSKGISPNVVTYSALISGFF-----------------------VVGKLKDAID-L 252
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVL 164
++ + I D + ++ + + ++ +VF + + I P++ NSL+
Sbjct: 253 FNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMM--KQGIIPDVVTYNSLM--- 307
Query: 165 ASDGY-----IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
DGY ++ A +F+ M+ GV + + I FC+ K+ + +++ +E+ +
Sbjct: 308 --DGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCK- 364
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
++I V +I G K R+ A +++D++ R P+ + Y + + V +
Sbjct: 365 -NIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDK 423
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGL 306
++ K + G+ P Y I GL
Sbjct: 424 AIALITKFKDQGIQPSMYTYTILIDGL 450
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 139/615 (22%), Positives = 235/615 (38%), Gaps = 140/615 (22%)
Query: 34 LEQTLHQLGLRDSLSPS-----------LVARVINPYLLTHHSL------------ALGF 70
LEQ Q+ R+ S S L+ +V P L+T+++L ALG
Sbjct: 436 LEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGL 495
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
+ + + ++++S+L L ++I +V K+ + Y +I L
Sbjct: 496 LEFMIES-GLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLS 554
Query: 131 QGKNTQKAFSVFNE-VKFNCED---IGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVE 186
+ +A + + V+ C + + LL V G +++A+ + +M G
Sbjct: 555 KMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKV----GRMEDAVVVLRQMRDAGCL 610
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
+ + I F + +L + + +L E+ E V + HG C+ R +EA
Sbjct: 611 PDAVTYNTLIDGFFKRQRLREAVGLLREML--EAGFHPSVVTYTTLCHGLCRSGRFDEAV 668
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK-KRKLGVAPRTNDYREFILG 305
++LD + R C P+ I Y + + G V E +K R VAP Y I G
Sbjct: 669 EILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDG 728
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTL 365
L RI EA E F MI GR+P +
Sbjct: 729 LCKAGRIDEAYE----------------------------------FLERMIRAGRIPDV 754
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
T S L LC + D +E++ ++ D+ +YN M++ C G AY +++E
Sbjct: 755 VTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEE 814
Query: 426 MKRKG--------------------LDPDVSFYNSLMEACCRE----------------- 448
MK G +D VS+++S+ E C E
Sbjct: 815 MKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSE 874
Query: 449 ---DLLRP----------------------------AKKLWDQMFASGCSGNLKTYNILI 477
+LLR A KL +M + G S +L+TY I+I
Sbjct: 875 QALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMI 934
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
S S+ ++ A F ML K + PDA Y+SL++ C+ + A+++ S +
Sbjct: 935 SGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRSSGIEPTI 994
Query: 538 LARSILSTFMISLCR 552
++ ST + SLC+
Sbjct: 995 ---TMYSTMVDSLCK 1006
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 101/475 (21%), Positives = 208/475 (43%), Gaps = 65/475 (13%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
FT ++Y++++ L + ++ A VL+ + + + + + L + N A
Sbjct: 171 GFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGA 230
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ F+ + ++L+ L G +D AL + + + + F+ F +
Sbjct: 231 YEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFA---FSSLLHG 287
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C+ +L + + +L + N + S +++G C+ +RV+EAF++ D ++ C
Sbjct: 288 LCQAHRLEEAIQLLKAMPCVPNVVCFNS-----LMNGLCQARRVDEAFELFDVMKESGCS 342
Query: 259 PDFIAYRIVAEEFKLMGSVFE--REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
D I Y I+ + + + E R V L ++ + G +P + I GL R+ +A
Sbjct: 343 ADVITYNILLKGLCKLRRIPEAYRHVELMRRTE-GCSPNVVTFSTLIQGLCNAGRVNQAW 401
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
E+ E +V+ V I P + F++E LC
Sbjct: 402 EVYERMVA----------------VEGISPNR--FTYAFLLE---------------GLC 428
Query: 377 KRNKSDELVEVYKVLSANDYFTD---------------------MESYNVMVSFLCTSGR 415
K S L + ++ + ++ + + +YN +V+ L SG
Sbjct: 429 KAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGM 488
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+R+A G+++ M GL PDV +NS+++ C+E + A ++ + GC N+ TY+
Sbjct: 489 VRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYST 548
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
LI S++ +++ AL+L M+E G + TY+++++GL + ++ A V +
Sbjct: 549 LIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQ 603
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 175/422 (41%), Gaps = 31/422 (7%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NSL+ L +D A ++FD M G I + + + C+ ++ + ++ +R+
Sbjct: 314 NSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRR 373
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RIRECKPDFIAYRIVAEEFKLMG- 275
E N + LI G C RV +A++V + + + P+ Y + E G
Sbjct: 374 TEGCSPNVVTFSTLI-QGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGD 432
Query: 276 ---------SVFEREVVLKKKRKLG-----------VAPRTNDYREFILGLIVERRICEA 315
+ ERE + P Y + GL + +A
Sbjct: 433 SRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDA 492
Query: 316 KELGEVIVSGKFTID----DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
L E ++ + D + VL+ L +D + F +E+G P + T S L
Sbjct: 493 LGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNV---FKRALERGCRPNVVTYSTL 549
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
L K K DE +++ + + +Y+ +V L GR+ +A V+++M+ G
Sbjct: 550 IDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGC 609
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
PD YN+L++ + LR A L +M +G ++ TY L G + A+
Sbjct: 610 LPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVE 669
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI-SL 550
+ M +G AP+A TY+S+++GLC+ + A F K +V+ I + +I L
Sbjct: 670 ILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGL 729
Query: 551 CR 552
C+
Sbjct: 730 CK 731
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 175/417 (41%), Gaps = 53/417 (12%)
Query: 127 PSLIQGKNTQKAFSVFNEVKFNC---EDIGPEIC-------NSLLAVLASDGYIDNALKM 176
P+++ NEV C E++ C N+L+ L G A +
Sbjct: 34 PTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSL 93
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
+ M+ G I FG+ I C+ ++ ++DE+ R + I +++H
Sbjct: 94 LERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDR--GFVPDVEIHTVLLHAL 151
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
C+ RV+EA+ ++ + PD + Y + + G + +VL+ + +P
Sbjct: 152 CELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTV 211
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFM 356
FTI D L+ G+++ A FF+ M
Sbjct: 212 F----------------------------TFTIAVDGLSK-AGNLT-----GAYEFFDSM 237
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
+ G P T L LCK K D + +L + M +++ ++ LC + RL
Sbjct: 238 PQTGVSPNTVTYDALIDGLCKAGKLDIAL---GLLRDKNSQAGMFAFSSLLHGLCQAHRL 294
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
EA IQ +K P+V +NSLM C+ + A +L+D M SGCS ++ TYNIL
Sbjct: 295 EEA---IQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNIL 351
Query: 477 ISKFSEVGEIEGALRLFHNMLE-KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
+ ++ I A R M +G +P+ T+++L++GLC + A+EV+ + V
Sbjct: 352 LKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMV 408
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 129/322 (40%), Gaps = 37/322 (11%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I+G CK RV +AF + +P + Y V + V + +L++
Sbjct: 6 VLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGR 65
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
G AP Y + NAL+G + + A
Sbjct: 66 GCAPNAVTYNTLV-------------------------------NALLGQGRA---KEAF 91
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
M G P L T + K LCK + + V + + D+E + V++ L
Sbjct: 92 SLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHAL 151
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C GR+ EA+ Q++ G PD YN++++ + L A + + S S +
Sbjct: 152 CELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTV 211
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
T+ I + S+ G + GA F +M + GV+P+ TY +L++GLC+ L A +
Sbjct: 212 FTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD 271
Query: 531 SVNHDVMLARSILSTFMISLCR 552
+ M A S+ + LC+
Sbjct: 272 KNSQAGMFA---FSSLLHGLCQ 290
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 84/152 (55%)
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
M +YNV+++ LC +GR+ +A+ ++ + G P V Y+++++ CR++ + KL +
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M GC+ N TYN L++ G + A L M G P+ T+ +++GLC+E
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
++AAF V ++ V+ + I + + +LC
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALC 152
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/492 (19%), Positives = 195/492 (39%), Gaps = 95/492 (19%)
Query: 85 LSYHSILKSL-SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
++Y +++ L + R +A+ VL+Q++ D+ Y +I + + ++A +
Sbjct: 579 VTYSTVVDGLLKVGRMEDAV-VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLR 637
Query: 144 EV---KFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
E+ F+ P + +L L G D A+++ D M+ RG + I + +
Sbjct: 638 EMLEAGFH-----PSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDG 692
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDEL----- 252
C+ ++ + L +++ + E ++ VIA +I G CK R++EA++ L+ +
Sbjct: 693 LCKAGRVTEALGYFEKMARDE--VVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGR 750
Query: 253 ------------------RI------------RECKPDFIAYRIVAEEFKLMGSVFEREV 282
RI R CK D AY + + L G
Sbjct: 751 IPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYA 810
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV-----LNAL 337
+L++ + G+A T + I L RI EA VS +I +D N L
Sbjct: 811 LLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEA-------VSYFHSIPEDCRDEISYNTL 863
Query: 338 IGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I S V+S A+ M+ G P + L K + ++ + + + +
Sbjct: 864 ITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGH 923
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD---------------------- 434
D+ +Y +M+S L + +L A +EM RK L PD
Sbjct: 924 SPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWK 983
Query: 435 ----------VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
++ Y++++++ C+ A ++ +M + C + + L + + G
Sbjct: 984 LLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEG 1043
Query: 485 EIEGALRLFHNM 496
++ A++L +++
Sbjct: 1044 RVDEAVKLVNDL 1055
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 170/429 (39%), Gaps = 19/429 (4%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHS------PLSYHSILKSL-S 95
LR+ L V+ L H G F+ A + ++ + ++Y SI+ L
Sbjct: 636 LREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCK 695
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
R A+ K + + Y +I L + +A+ F E I P+
Sbjct: 696 AGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYE-FLERMIRAGRI-PD 753
Query: 156 IC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
+ + L+ L G ID L++F M+ RG + + I +C + ++L+
Sbjct: 754 VVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLE 813
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
E++ + + +V ++I C R++EA + +C+ D I+Y +
Sbjct: 814 EMKT--HGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIP-EDCR-DEISYNTLITSLVA 869
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
+ +L+ G +P +Y + GL A +L + + S + D
Sbjct: 870 SRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRT 929
Query: 334 LNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
+I +S A +F M+ K P S+L CK +K D+ +K+L
Sbjct: 930 YTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDD---AWKLLR 986
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
++ + Y+ MV LC + +A VI+EMK K +P + + SL A E +
Sbjct: 987 SSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVD 1046
Query: 453 PAKKLWDQM 461
A KL + +
Sbjct: 1047 EAVKLVNDL 1055
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/392 (18%), Positives = 160/392 (40%), Gaps = 24/392 (6%)
Query: 51 LVARVINPYLLTHHSL------------ALGFFNWASQQPNFTHSPLSYHSILKSLSLSR 98
+ AR P +T+ S+ ALG+F ++ ++Y +++ L +
Sbjct: 674 MAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAG 733
Query: 99 QIN-AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF-NEVKFNCE-DIGPE 155
+I+ A + + + ++ +I D + +I L +F + C+ DI
Sbjct: 734 RIDEAYEFLERMIRAGRIP-DVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAY 792
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
N+++ G A + +EM G+ +T+ G+ I C N ++ + +S +
Sbjct: 793 --NAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSI 850
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ I+ + + I +R E+A ++L + PD Y V + G
Sbjct: 851 PEDCRDEISYNTL----ITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAG 906
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
S +L++ R G +P Y I GL +++ A + E ++ D V +
Sbjct: 907 SPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYS 966
Query: 336 ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
+LI + D + + G PT++ S + +LCK +D+ +EV + + + +
Sbjct: 967 SLIDAFCKADKVDDA--WKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKN 1024
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ + + + GR+ EA ++ +++
Sbjct: 1025 CEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/474 (21%), Positives = 196/474 (41%), Gaps = 42/474 (8%)
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN---EVKFNCEDIGPEICNS 159
+D VL+++ D Y ++ L K +Q+A + + + K C + +
Sbjct: 155 MDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCP-LDVVAYTT 213
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
++ L +G +D A +FD M RG + + I + + + + R +
Sbjct: 214 VINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVF--TRMVK 271
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
N ++ ++ ++HG+C + +EA + ++ +PD + Y + + G E
Sbjct: 272 NGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTE 331
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+ K G P + Y + G E + E +L ++++ + + N ++G
Sbjct: 332 ARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMG 391
Query: 340 SVS------------------SIDPR------------------SAIVFFNFMIEKGRVP 363
+ + ++P A+ FN + +G P
Sbjct: 392 AYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAP 451
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ + L LC +K D++ E+ + D +N ++ LC GR+ EA +
Sbjct: 452 NIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLF 511
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
M R G++P+ + YN+L++ C + + A KL M +G + TYN +I+ +S+
Sbjct: 512 DLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQN 571
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
G IE L L M KGV P TY LL+GL Q AA E++ + + D +
Sbjct: 572 GRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIKWDTV 625
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 138/318 (43%), Gaps = 44/318 (13%)
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS--GKFTID-- 330
G ++VL++ +LG P Y + GL ++ +A +L ++ G+ +D
Sbjct: 150 GRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVV 209
Query: 331 --DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
V+N L+ +D A F+ M+++G P + T S++ L K D+ +V+
Sbjct: 210 AYTTVINGLL-REGQLD--KAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVF 266
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+ N D Y +V C+SG+ +EA G+ ++M R G++PDV Y +LM+ C+
Sbjct: 267 TRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKN 326
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG------------------------ 484
A+K++D + G + TY L+ ++ G
Sbjct: 327 GKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIF 386
Query: 485 -----------EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
+++ AL +F NM ++G+ PD Y ++L+ LC + A FN +
Sbjct: 387 NMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKS 446
Query: 534 HDVMLARSILSTFMISLC 551
+ + +T + LC
Sbjct: 447 EGLAPNIVVFTTLIHGLC 464
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 146/331 (44%), Gaps = 11/331 (3%)
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRE--CKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+++ G C K ++A +L + + C D +AY V G + + +
Sbjct: 175 TILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAM 234
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDP 346
G +P Y I L + + +A ++ +V D + +L+ G SS P
Sbjct: 235 LDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKP 294
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+ AI F M G P + T + L LCK KS E +++ L + D +Y +
Sbjct: 295 KEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTL 354
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ T G L E + ++ M +KG+ +N +M A + + + A ++ M G
Sbjct: 355 LHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGL 414
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ----ETNLQ 522
+ ++ Y ++ G ++ AL F+++ +G+AP+ +T+L+ GLC + +
Sbjct: 415 NPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEE 474
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
AFE+ ++ + D + +I+ +LC++
Sbjct: 475 LAFEMIDRGICLDTIFFNAIMG----NLCKK 501
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/482 (20%), Positives = 210/482 (43%), Gaps = 39/482 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y++++ L + + + D + K++ + + Y +I +L + + A +F++
Sbjct: 339 FAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDK 398
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ + NSL+ G +D A + M G+ + + I C N
Sbjct: 399 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGD 458
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + + E+ +R + N + A +I+GFCK K+++EA ++ D++ P+ + +
Sbjct: 459 LSSCMELHREMAERGIAWNNYTFTA--LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 516
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
++ E + L+G++ + + + ++G+ P YR I GL + + +A E + +
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576
Query: 325 GKFTIDDDVLNALI------------------------------------GSVSSIDPRS 348
+++ L AL+ ++ D
Sbjct: 577 SYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 636
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
+ V F M E+G P + + L K + + + + + Y + ++ V+++
Sbjct: 637 SCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLIN 696
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC SG L A + +EM + P+ YN ++ E + AK L M G
Sbjct: 697 NLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLA 755
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ ++NILI + G+I+ A+ L + E G +PD +Y++++ LC+ ++ AFE++
Sbjct: 756 SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELW 815
Query: 529 NK 530
N+
Sbjct: 816 NE 817
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 171/388 (44%), Gaps = 19/388 (4%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A +FD+M GV + I +CE+ L ++ VR + +V ++
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV--VRMESEGVKASAVPYNVL 239
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR---K 289
++G CK RV+EA +V + + D + YR + F M E E+ L+ +
Sbjct: 240 MYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRME---ELEMALRITHDMIR 296
Query: 290 LGVAPRTNDYREFILGL----IVERRICEAKELGEV-IVSGKFTIDDDVLNALIGSVSSI 344
LG P + I L +VE A +LG++ +V F NALI +
Sbjct: 297 LGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFA-----YNALIDKLCKN 351
Query: 345 DP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ A F M +G P T + L LCKR ++ + ++ + + Y
Sbjct: 352 ERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPY 411
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N +++ C G L A G++ M ++GL P + Y+ L+ CR L +L +M
Sbjct: 412 NSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAE 471
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G + N T+ LI+ F + +++ A RLF M++ V P+ T+ ++EG C N++
Sbjct: 472 RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRK 531
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLC 551
AF+++++ V + + + LC
Sbjct: 532 AFQLYDQMVEMGLKPDNYTYRSLISGLC 559
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 186/430 (43%), Gaps = 80/430 (18%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+A L +G + + +++ EM+ RG+ ++ F I FC++ K+ + + D++ +
Sbjct: 449 LIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI--D 506
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+++I V ++I G+C + +AF++ D++ KPD YR + L V +
Sbjct: 507 SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 566
Query: 280 -REVVLKKKRKLGVAPRTNDYR--EFILGLIVERRICEAKEL-GEVIVSG------KFTI 329
E V + V N++ + G E R E L E+ V G FTI
Sbjct: 567 ANEFVADLENSYAV---LNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTI 623
Query: 330 ----------------------------DDDVLNALIGSVSSIDPR-SAIVFFNFMIEKG 360
DD +I ++S + A+ ++ M+ G
Sbjct: 624 IVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDG 683
Query: 361 RVPTLSTLSNLSKNLCKRN--KSDELVEVYKVLSAN------------DYFT---DME-- 401
P T + L NLCK S EL+ ++L+ N DYF DME
Sbjct: 684 YSPNTVTHTVLINNLCKSGYLGSAELL-CKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA 742
Query: 402 ----------------SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
S+N+++ LC +G+++EA ++ ++ G PD Y++++
Sbjct: 743 KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHEL 802
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+ + A +LW++M G ++ YNI I + GE + AL ++ NM+ GV P+
Sbjct: 803 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNW 862
Query: 506 TTYTSLLEGL 515
TY +LL G+
Sbjct: 863 DTYRALLSGI 872
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 167/366 (45%), Gaps = 19/366 (5%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D A + M GV+ S + + V ++ C+N ++ + + + +N M+N V A
Sbjct: 214 LDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEV-------KNVMVNIGVTA 266
Query: 230 -----VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+++GFC+ + +E A ++ ++ P + +E + V E +
Sbjct: 267 DEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLA 326
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
K LG+ P Y I L R +A L + + +G+ ++V A++ + ++
Sbjct: 327 CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEM-AGRGLEPNEVTYAIL--IHAL 383
Query: 345 DPRS----AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
R A+ F+ M +KG T+ ++L CK+ D + +
Sbjct: 384 CKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTA 443
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
SY+ +++ LC +G L + +EM +G+ + + +L+ C++ + A +L+D+
Sbjct: 444 ASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDK 503
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M S N T+N++I + VG I A +L+ M+E G+ PD TY SL+ GLC +
Sbjct: 504 MIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSG 563
Query: 521 LQAAFE 526
+ A E
Sbjct: 564 VSKANE 569
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 1/263 (0%)
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSA 349
GV Y + GL R+ EA E+ V+V+ T D+ L+ ++ A
Sbjct: 228 GVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMA 287
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ + MI G VP+ + S + L K+ +E + L ++ +YN ++
Sbjct: 288 LRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDK 347
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC + R +A + +EM +GL+P+ Y L+ A C+ ++ A L+D+M G
Sbjct: 348 LCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVT 407
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ YN LI+ + + G ++ A L M+++G+ P A +Y+ L+ GLC+ +L + E+
Sbjct: 408 VYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHR 467
Query: 530 KSVNHDVMLARSILSTFMISLCR 552
+ + + + C+
Sbjct: 468 EMAERGIAWNNYTFTALINGFCK 490
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 161/407 (39%), Gaps = 45/407 (11%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N + ++++ +++ L I + Q+ + D+ YR SLI G
Sbjct: 508 NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYR----SLISGLCLTSG 563
Query: 139 FSVFNEVKFNCEDIGPEICN-SLLAVLAS---DGYIDNALKMFDEMSHRGVEFSTIGFGV 194
S NE + E+ + N SL A+L +G ++DEM+ RGV+ + F +
Sbjct: 564 VSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTI 623
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
++ + + + E++ E + + +I K + + +A D++ +
Sbjct: 624 IVYAALKQHDKEKSCVLFREMK--EQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVV 681
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
P+ + + ++ G + E++ K+ V P Y F+ E + +
Sbjct: 682 DGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEK 741
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
AK+L ++ G ++IV FN +I K
Sbjct: 742 AKDLHSAMLQGHL--------------------ASIVSFNILI---------------KG 766
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK K E +++ ++ + + D SY+ ++ LC G + +A+ + EM KGL PD
Sbjct: 767 LCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPD 826
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
V YN + C A ++ M SG N TY L+S S
Sbjct: 827 VVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGIS 873
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 35/186 (18%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR-----------EDLL 451
YNV++ LC + R++EA V M G+ D Y +L+ CR D++
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 295
Query: 452 R----PA-------------KKLWDQMFASGCS-------GNLKTYNILISKFSEVGEIE 487
R P+ K+L ++ F+ C N+ YN LI K + +
Sbjct: 296 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFD 355
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
A RLF M +G+ P+ TY L+ LC+ ++ A +F+K + + + ++ +
Sbjct: 356 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 415
Query: 548 ISLCRR 553
C++
Sbjct: 416 NGYCKQ 421
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A + +M + G+ D Y + + A C L A+ L +M + G + YN+L+
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 241
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+ ++ A+ + + M+ GV D TY +L+ G C+ L+ A + HD++
Sbjct: 242 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALR-----ITHDMIR 296
Query: 539 ARSILS----TFMISLCRR 553
+ S +FMI R+
Sbjct: 297 LGFVPSEANCSFMIDELRK 315
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 194/452 (42%), Gaps = 46/452 (10%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQV-KVNKITLDSSV-YRFIIPSLIQGKNTQKAFSVF 142
SY +LKSL R+ D +L+ + + + L ++V Y +I + + KA +F
Sbjct: 180 FSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLF 239
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
NE+ I P++ N ++ L +D A + +M +GV + I+ +
Sbjct: 240 NEMVQ--RGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGY- 296
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ GQ + +K + I V+ + ++ CK ++++A V D + ++ K
Sbjct: 297 --SSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKT 354
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D +Y+I+ + G + + + G+AP
Sbjct: 355 DIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAP------------------------- 389
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
D + N LI + + A + FN M E+G P + T S + LC+
Sbjct: 390 ----------DSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRI 439
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
K D+ VE + + + +Y+ ++ CT G L +A ++ +M KG+ PD+ +
Sbjct: 440 GKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCF 499
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
N ++ C+ + A+ ++D + G N+ YN L+ + VG++E ALR+F M+
Sbjct: 500 NFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVS 559
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
G+ P+ Y +L+ G C+ + +F +
Sbjct: 560 AGIQPNVVVYGTLVNGYCKVGRIDEGLSLFRE 591
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 172/370 (46%), Gaps = 8/370 (2%)
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLII 233
L F ++ G+ TI + CE + + L +L R + +++
Sbjct: 128 LAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLH-RMPHLGCVPDVFSYCIVL 186
Query: 234 HGFCKGKRVEEAFKVLDELRIRE--CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
C ++ +A ++L + C P+ +AY V + F G V + + + + G
Sbjct: 187 KSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRG 246
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAI 350
++P + Y + L R + +A+ + +V D+ N+LI SS + A+
Sbjct: 247 ISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAV 306
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
M +G +P + TL++L +LCK K + +V+ ++ TD+ SY +M++
Sbjct: 307 RVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGY 366
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
T G L + + M G+ PD +N L++A + +L A ++++M G ++
Sbjct: 367 ATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDV 426
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA----FE 526
TY+ +I+ +G+++ A+ F+ M+++GVAP +TY L++G C +L A +
Sbjct: 427 VTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQ 486
Query: 527 VFNKSVNHDV 536
+ NK + D+
Sbjct: 487 MMNKGMRPDI 496
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 199/448 (44%), Gaps = 11/448 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF--SVFN 143
+Y+ ++ +L +R ++ +++L+Q+ + D+ Y SLI G ++ + +V
Sbjct: 253 TYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYN----SLIYGYSSTGQWKEAVRV 308
Query: 144 EVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
K + I P++ NSL+A L G I +A +FD M+ +G + + + + +
Sbjct: 309 SKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYAT 368
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
L + + + + + + S I ++I + K ++ A + +E+R + +PD
Sbjct: 369 KGCLVDLTELFNLML--SDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDV 426
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ Y V +G + + + GVAP + Y I G + +AK+L
Sbjct: 427 VTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQ 486
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+++ D N +I ++ + A F+F I G P + + L C K
Sbjct: 487 MMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGK 546
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+ + V+ V+ + ++ Y +V+ C GR+ E + +E+ KG+ P + YN
Sbjct: 547 MENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNI 606
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
++ + PAK + +M SG + + TY+I++ + + A+ LF +
Sbjct: 607 ILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMN 666
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVF 528
V D TT ++ G+ Q ++ A ++F
Sbjct: 667 VKIDITTLNIMIAGMFQIRRVEEAKDLF 694
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 131/275 (47%), Gaps = 3/275 (1%)
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALI 338
+++L + LG P Y + L +R+ +A EL ++ G + + N +I
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVI 223
Query: 339 -GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
G D A FN M+++G P LST + + LCK D+ + + +
Sbjct: 224 DGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVL 283
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D +YN ++ ++G+ +EA V ++M +G+ PDV NSLM + C+ ++ A+ +
Sbjct: 284 PDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDV 343
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+D M G ++ +Y I+++ ++ G + LF+ ML G+APD+ + L++ +
Sbjct: 344 FDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAK 403
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L A +FN+ V ST + +LCR
Sbjct: 404 CGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCR 438
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/413 (21%), Positives = 164/413 (39%), Gaps = 36/413 (8%)
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ M H G + + + C + K GQ +L + + + +V +I G
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDG 225
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
F K V +A + +E+ R PD Y V ++ + E +L++ GV P
Sbjct: 226 FFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPD 285
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFN 354
Y I G + EA + + + S D LN+L+ S+ + A F+
Sbjct: 286 NWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFD 345
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M KG+ + + + + +L E++ ++ ++ D +NV++ G
Sbjct: 346 SMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCG 405
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
L A + EM+ +G++PDV Y++++ A CR + A + ++QM G + ++ TY+
Sbjct: 406 MLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYH 465
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPD------------------------------ 504
LI F G++ A L M+ KG+ PD
Sbjct: 466 FLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISI 525
Query: 505 -----ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
Y +L++G C ++ A VF+ V+ + + T + C+
Sbjct: 526 GLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCK 578
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 190/422 (45%), Gaps = 27/422 (6%)
Query: 113 NKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYI 170
+ I DS ++ +I + + +A +FNE++ + + P++ ++++A L G +
Sbjct: 385 DGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMRE--QGVEPDVVTYSTVIAALCRIGKM 442
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ----VLSMLDEVRKRENSMINGS 226
D+A++ F++M +GV S + I FC + L + VL M+++ + + N
Sbjct: 443 DDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFN-- 500
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
II+ CK RV +A + D P+ + Y + + + L+G + V
Sbjct: 501 ----FIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDV 556
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSG---KFTIDDDVLNALIGSVS 342
G+ P Y + G RI E L E++ G T+ + +L+ L +
Sbjct: 557 MVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGR 616
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
++ A V F+ M E G T S + L K + SDE + ++K L A + D+ +
Sbjct: 617 TV---PAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITT 673
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
N+M++ + R+ EA + + R GL P V Y+ +M +E L+ A ++ M
Sbjct: 674 LNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSME 733
Query: 463 ASGC-SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE-----GLC 516
+GC N + N ++ + E EI A + E+ + D +T T L++ G C
Sbjct: 734 NAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLIDLFSSKGTC 793
Query: 517 QE 518
+E
Sbjct: 794 RE 795
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 103/211 (48%), Gaps = 3/211 (1%)
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV-YKVLSANDYFTDMESYN 404
P+ + FF +++ G +SNL + LC+ ++ E +++ + D+ SY
Sbjct: 124 PKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYC 183
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLD--PDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+++ LC+ + +A +++ M G P+ YN++++ +E + A L+++M
Sbjct: 184 IVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMV 243
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G S +L TYN +++ + ++ A + M++KGV PD TY SL+ G +
Sbjct: 244 QRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWK 303
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
A V K + ++ L++ M SLC+
Sbjct: 304 EAVRVSKKMTSQGILPDVVTLNSLMASLCKH 334
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/506 (23%), Positives = 216/506 (42%), Gaps = 66/506 (13%)
Query: 42 GLRDSLSPSLVARVI----NPYLLTHHSLALGFF--NWASQ-------------QPNFTH 82
G R S + SLV +++ P T ++L G F N AS+ QP+
Sbjct: 164 GNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDL-- 221
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
++Y ++ L I+ S+LK+++ KI +Y II +L KN A ++F
Sbjct: 222 --VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E+ + + I P + NSL+ L + G +A ++ +M R + + + F I F
Sbjct: 280 TEM--DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVL-IIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ KL + + DE+ KR I+ + +I+GFC R++EA + + + ++C P
Sbjct: 338 KEGKLVEAEKLYDEMIKRS---IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
+ + Y + + F V E + ++ + G+ T Y I G + R C+
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF-QARECD----- 448
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+A + F M+ G +P + T S L LC
Sbjct: 449 ----------------------------NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K + + V++ L + D+ +YN+M+ +C +G++ + + + + KG+ P+V Y
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
++M CR+ L A L+ +M G + TYN LI G+ + L M
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 600
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAF 525
DA+T L+ + + L +F
Sbjct: 601 RFVGDAST-IGLVTNMLHDGRLDKSF 625
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 199/448 (44%), Gaps = 11/448 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++ +S+L +I+ S++ Q+ DS + +I L + +A ++ +
Sbjct: 152 VTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDR 211
Query: 145 -VKFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
V C+ P++ + V L G ID AL + +M +E + + I C
Sbjct: 212 MVVKGCQ---PDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCN 268
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ L++ E+ +N I +V+ +I C R +A ++L ++ R+ P+
Sbjct: 269 YKNVNDALNLFTEM---DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 325
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ + + + F G + E E + + K + P Y I G + R+ EAK + E
Sbjct: 326 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 385
Query: 321 VIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+++S + N LI G + + F M ++G V T + L +
Sbjct: 386 LMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 445
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ D V+K + ++ D+ +Y++++ LC +G++ A V + ++R ++PD+ YN
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYN 505
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
++E C+ + L+ + G N+ TY ++S F G E A LF M E+
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEV 527
G PD+ TY +L+ ++ + A+ E+
Sbjct: 566 GPLPDSGTYNTLIRAHLRDGDKAASAEL 593
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 176/425 (41%), Gaps = 67/425 (15%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL+ +A D + + ++M + G+ + + + I FC ++L L++L ++ K
Sbjct: 87 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG 146
Query: 220 --------NSMING-----------SVIAVLI--------------IHGFCKGKRVEEAF 246
NS++NG S++ ++ IHG + R EA
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
++D + ++ C+PD + Y IV G + +LKK + + P Y I L
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
C K + +D LN F M KG P +
Sbjct: 267 ------CNYKNV------------NDALN----------------LFTEMDNKGIRPNVV 292
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T ++L + LC + + + + ++ +++ ++ G+L EA + EM
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
++ +DPD+ Y+SL+ C D L AK +++ M + C N+ TYN LI F + +
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
+ + LF M ++G+ + TYT+L+ G Q A VF + V+ V+ S
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 547 MISLC 551
+ LC
Sbjct: 473 LDGLC 477
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 169/375 (45%), Gaps = 9/375 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L A+ + D M +G + + +G+ + C+ + LS+L +K
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL---KK 246
Query: 218 RENSMIN-GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E I G VI II C K V +A + E+ + +P+ + Y + G
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL-- 334
+ +L + + P + I + E ++ EA++L + ++ K +ID D+
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTY 364
Query: 335 NALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
++LI D A F MI K P + T + L K CK + DE +E+++ +S
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ +Y ++ + A V ++M G+ PD+ Y+ L++ C +
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A +++ + S ++ TYNI+I + G++E LF ++ KGV P+ TYT+++
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 544
Query: 514 GLCQETNLQAAFEVF 528
G C++ + A +F
Sbjct: 545 GFCRKGLKEEADALF 559
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 117/271 (43%), Gaps = 1/271 (0%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
VL K KLG P + G RI +A L +V + D N LI +
Sbjct: 138 VLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF 197
Query: 343 SIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ S A+ + M+ KG P L T + LCKR D + + K + +
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
YN ++ LC + +A + EM KG+ P+V YNSL+ C A +L M
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ N+ T++ LI F + G++ A +L+ M+++ + PD TY+SL+ G C L
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A +F ++ D +T + C+
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F M++ P++ S L + K NK D ++ + + + ++ +Y+++++
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C +L A V+ +M + G +PD+ NSL+ C + + A L QM G
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ T+N LI A+ L M+ KG PD TY ++ GLC+ ++ A +
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 529 NKSVNHDVMLARSILSTFMISLC 551
K + I +T + +LC
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALC 267
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 22/187 (11%)
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
NL ++ K +VE K+LSA M +++++S + ++M+
Sbjct: 67 NLFGDMVKSRPFPSIVEFSKLLSA---IAKMNKFDLVIS-------------LGEQMQNL 110
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
G+ ++ Y+ L+ CR L A + +M G ++ T N L++ F I A
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI- 548
+ L M+E G PD+ T+ +L+ GL + A + ++ V V + L T+ I
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMV---VKGCQPDLVTYGIV 227
Query: 549 --SLCRR 553
LC+R
Sbjct: 228 VNGLCKR 234
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 133/580 (22%), Positives = 240/580 (41%), Gaps = 90/580 (15%)
Query: 5 PATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHH 64
P L R + II A+N + L L L L SL+P + ++ L
Sbjct: 61 PRRHLICRATNLIIGATNLSDAFSD----LSDYLSSLTL--SLTPDEASEILKS--LNSP 112
Query: 65 SLALGFFNWA-SQQPNFTHSPLSYHSILKSLSLSRQINAIDSV----------------- 106
+A+ FF + S PN + P Y+ I+ LS S + D V
Sbjct: 113 LVAVEFFKFVPSLCPNSQNDPFLYNRIILILSRSNLSDRFDRVRSILDSMVKSNVHGNIS 172
Query: 107 ------------------LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
L+ VK + ++S Y+ ++ + ++ +++ KAF V+ E++
Sbjct: 173 TVNILIGFFGDTEDLQMCLRLVKKWGLKMNSFTYKCLLQAYLRSRDSSKAFDVYCEIRRG 232
Query: 149 CEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV 208
+ N LL LA D + A ++F++M R + + I K +
Sbjct: 233 GHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYSYTIMIRTMGRIGKYDEA 289
Query: 209 LSMLDEVRKRENSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ + +E+ + G + V+ ++ KGK V++A +V + C+P+ Y
Sbjct: 290 VGLFNEM------ITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTY 343
Query: 265 RIVAEEFKLMGSVFEREVVLK-KKR---------------KLG----------------V 292
+V G + + +++ KR KLG V
Sbjct: 344 SLVLNLLVAEGQLVRLDGIVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPV 403
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV- 351
+ Y + L + EA E+ I D + N + ++ + S I
Sbjct: 404 KGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHD 463
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F M + G P + T + L + + + DE + +++ L +D D+ SYN +++ L
Sbjct: 464 LFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLG 523
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+G + EA+ +EM+ KGL+PDV Y++LME + + + A L+++M GC N+
Sbjct: 524 KNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIV 583
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
TYNIL+ + G A+ L+ M ++G+ PD+ TYT L
Sbjct: 584 TYNILLDCLEKSGRTAEAVDLYTKMKQQGLTPDSITYTVL 623
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 36/203 (17%)
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K ++ +V++ + D SY +M+ + G+ EA G+ EM +GL +V YN
Sbjct: 250 KDEKACQVFEDMKKRHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITEGLTLNVVGYN 309
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI------------------------ 475
+LM+ + ++ A +++ +M +GC N TY++
Sbjct: 310 TLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGIVEISKRY 369
Query: 476 --------LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
L+ S++G + A RLF +M V + +Y S+LE LC A E+
Sbjct: 370 MTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEM 429
Query: 528 FN----KSVNHDVMLARSILSTF 546
+ K V D M+ ++ S
Sbjct: 430 LSKIHEKGVVTDTMMYNTVFSAL 452
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 157/389 (40%), Gaps = 31/389 (7%)
Query: 154 PEICNSLLAVLA----SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
P + N ++ +L+ SD + D + D M V + + I F + L L
Sbjct: 133 PFLYNRIILILSRSNLSDRF-DRVRSILDSMVKSNVHGNISTVNILIGFFGDTEDLQMCL 191
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
++ + + NS ++ + + + +AF V E+R K D AY ++ +
Sbjct: 192 RLVKKWGLKMNSFTYKC-----LLQAYLRSRDSSKAFDVYCEIRRGGHKLDIFAYNMLLD 246
Query: 270 EF---KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER--RICEAKELGEVIVS 324
+ VFE KKR R ++Y I+ + R + EA L +++
Sbjct: 247 ALAKDEKACQVFED----MKKRHC----RRDEYSYTIMIRTMGRIGKYDEAVGLFNEMIT 298
Query: 325 GKFTIDDDVLNALIGSVSS---IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
T++ N L+ ++ +D AI F+ M+E G P T S L NL
Sbjct: 299 EGLTLNVVGYNTLMQVLAKGKMVD--KAIQVFSRMVETGCRPNEYTYS-LVLNLLV--AE 353
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+LV + ++ + + Y+ +V L G + EA+ + +M + + Y S+
Sbjct: 354 GQLVRLDGIVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSM 413
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+E+ C A ++ ++ G + YN + S ++ +I LF M + G
Sbjct: 414 LESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGP 473
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNK 530
+PD TY L+ + + A +F +
Sbjct: 474 SPDIFTYNILISSFGRVGEVDEAINIFEE 502
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/482 (20%), Positives = 210/482 (43%), Gaps = 39/482 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y++++ L + + + D + K++ + + Y +I +L + + A +F++
Sbjct: 339 FAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDK 398
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ + NSL+ G +D A + M G+ + + I C N
Sbjct: 399 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGD 458
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + + E+ +R + N + A +I+GFCK K+++EA ++ D++ P+ + +
Sbjct: 459 LSSCMELHREMAERGIAWNNYTFTA--LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTF 516
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
++ E + L+G++ + + + ++G+ P YR I GL + + +A E + +
Sbjct: 517 NVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576
Query: 325 GKFTIDDDVLNALI------------------------------------GSVSSIDPRS 348
+++ L AL+ ++ D
Sbjct: 577 SYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEK 636
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
+ V F M E+G P + + L K + + + + + Y + ++ V+++
Sbjct: 637 SCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLIN 696
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC SG L A + +EM + P+ YN ++ E + AK L M G
Sbjct: 697 NLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLA 755
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ ++NILI + G+I+ A+ L + E G +PD +Y++++ LC+ ++ AFE++
Sbjct: 756 SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELW 815
Query: 529 NK 530
N+
Sbjct: 816 NE 817
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 166/369 (44%), Gaps = 19/369 (5%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A +FD+M GV + I +CE+ L ++ VR + +V ++
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV--VRMESEGVKASAVPYNVL 239
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR---K 289
++G CK RV+EA +V + + D + YR + F M E E+ L+ +
Sbjct: 240 MYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRME---ELEMALRITHDMIR 296
Query: 290 LGVAPRTNDYREFILGL----IVERRICEAKELGEV-IVSGKFTIDDDVLNALIGSVSSI 344
LG P + I L +VE A +LG++ +V F NALI +
Sbjct: 297 LGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFA-----YNALIDKLCKN 351
Query: 345 DP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ A F M +G P T + L LCKR ++ + ++ + + Y
Sbjct: 352 ERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPY 411
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N +++ C G L A G++ M ++GL P + Y+ L+ CR L +L +M
Sbjct: 412 NSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAE 471
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G + N T+ LI+ F + +++ A RLF M++ V P+ T+ ++EG C N++
Sbjct: 472 RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRK 531
Query: 524 AFEVFNKSV 532
AF+++++ V
Sbjct: 532 AFQLYDQMV 540
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 167/366 (45%), Gaps = 19/366 (5%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D A + M GV+ S + + V ++ C+N ++ + + + +N M+N V A
Sbjct: 214 LDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEV-------KNVMVNIGVTA 266
Query: 230 -----VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+++GFC+ + +E A ++ ++ P + +E + V E +
Sbjct: 267 DEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLA 326
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
K LG+ P Y I L R +A L + + +G+ ++V A++ + ++
Sbjct: 327 CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEM-AGRGLEPNEVTYAIL--IHAL 383
Query: 345 DPRS----AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
R A+ F+ M +KG T+ ++L CK+ D + +
Sbjct: 384 CKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTA 443
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
SY+ +++ LC +G L + +EM +G+ + + +L+ C++ + A +L+D+
Sbjct: 444 ASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDK 503
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M S N T+N++I + VG I A +L+ M+E G+ PD TY SL+ GLC +
Sbjct: 504 MIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSG 563
Query: 521 LQAAFE 526
+ A E
Sbjct: 564 VSKANE 569
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 1/263 (0%)
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSA 349
GV Y + GL R+ EA E+ V+V+ T D+ L+ ++ A
Sbjct: 228 GVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMA 287
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ + MI G VP+ + S + L K+ +E + L ++ +YN ++
Sbjct: 288 LRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDK 347
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC + R +A + +EM +GL+P+ Y L+ A C+ ++ A L+D+M G
Sbjct: 348 LCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVT 407
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ YN LI+ + + G ++ A L M+++G+ P A +Y+ L+ GLC+ +L + E+
Sbjct: 408 VYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHR 467
Query: 530 KSVNHDVMLARSILSTFMISLCR 552
+ + + + C+
Sbjct: 468 EMAERGIAWNNYTFTALINGFCK 490
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 161/407 (39%), Gaps = 45/407 (11%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N + ++++ +++ L I + Q+ + D+ YR +I L KA
Sbjct: 508 NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKA 567
Query: 139 FSVFNEVKFNCEDIGPEICN-SLLAVLAS---DGYIDNALKMFDEMSHRGVEFSTIGFGV 194
NE + E+ + N SL A+L +G ++DEM+ RGV+ + F +
Sbjct: 568 ----NEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTI 623
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
++ + + + E++ E + + +I K + + +A D++ +
Sbjct: 624 IVYAALKQHDKEKSCVLFREMK--EQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVV 681
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
P+ + + ++ G + E++ K+ V P Y F+ E + +
Sbjct: 682 DGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEK 741
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
AK+L ++ G ++IV FN +I K
Sbjct: 742 AKDLHSAMLQGHL--------------------ASIVSFNILI---------------KG 766
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK K E +++ ++ + + D SY+ ++ LC G + +A+ + EM KGL PD
Sbjct: 767 LCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPD 826
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
V YN + C A ++ M SG N TY L+S S
Sbjct: 827 VVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGIS 873
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 35/186 (18%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR-----------EDLL 451
YNV++ LC + R++EA V M G+ D Y +L+ CR D++
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 295
Query: 452 R----PA-------------KKLWDQMFASGCS-------GNLKTYNILISKFSEVGEIE 487
R P+ K+L ++ F+ C N+ YN LI K + +
Sbjct: 296 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFD 355
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
A RLF M +G+ P+ TY L+ LC+ ++ A +F+K + + + ++ +
Sbjct: 356 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 415
Query: 548 ISLCRR 553
C++
Sbjct: 416 NGYCKQ 421
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A + +M + G+ D Y + + A C L A+ L +M + G + YN+L+
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 241
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+ ++ A+ + + M+ GV D TY +L+ G C+ L+ A + HD++
Sbjct: 242 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALR-----ITHDMIR 296
Query: 539 ARSILS----TFMISLCRR 553
+ S +FMI R+
Sbjct: 297 LGFVPSEANCSFMIDELRK 315
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 179/398 (44%), Gaps = 19/398 (4%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
SL+ L + I A ++F M G + + +G I C + L + E
Sbjct: 166 SLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQE---- 221
Query: 219 ENSMING-SVIAV----------LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
M+NG S A+ +II CK + +EA ++ +E+ + +PD + + +
Sbjct: 222 ---MLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSAL 278
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
+ G V E + L+ G+ P + I G + + AKEL + S +
Sbjct: 279 IDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGY 338
Query: 328 TIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
D LI G + + A+ +N M+ G+ P + T L K L K + +
Sbjct: 339 EPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKK 398
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
++ V+ + ++ +V + LC +G L EA + E+K + D+ +N L++ C
Sbjct: 399 LFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLC 458
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ L A +L++++ G ++ TY I+I+ F + G+++ A LF M E G P+
Sbjct: 459 KARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLL 518
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILS 544
TY++LL G + L+ ++ +K + DV LA SI +
Sbjct: 519 TYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYT 556
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 166/388 (42%), Gaps = 16/388 (4%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-L 231
AL+ FD M S I F + + + QV S+ +K + ++ + + +
Sbjct: 80 ALQFFDLMMR-----SIISFNLLLGALAKIKHYSQVFSL---YKKMHLAGLSPNFFTLNI 131
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I+ C RV E + + R PD + Y + + + + E + + +KLG
Sbjct: 132 LINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLG 191
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSG--KFTIDDD----VLNALIGSVSSID 345
P Y I GL I A +L + +++G + I+ N +I + I
Sbjct: 192 CWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIG 251
Query: 346 P-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
+ A FN M+++G P + T S L LCK E + + + D+ ++
Sbjct: 252 KWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFT 311
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
++ C G L A + M KG +PDV Y L+ C+ + A KL+++M
Sbjct: 312 SLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRV 371
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G ++KT+ +L+ G++ A +LF + V + + L+GLC+ L A
Sbjct: 372 GKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEA 431
Query: 525 FEVFNKSVNHDVMLARSILSTFMISLCR 552
E+FN+ ++++ L + + LC+
Sbjct: 432 MELFNELKSYNMKLDIESFNCLIDGLCK 459
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 13/222 (5%)
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+I A+ FF+ M+ ++ + + L L K ++ +YK + +
Sbjct: 73 GNITSTQALQFFDLMMR-----SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFF 127
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+ N++++ LC R+RE + + R+G PDV Y SL++ C E + A +L+ +M
Sbjct: 128 TLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRM 187
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT-------TYTSLLEG 514
GC N+ TY LI G I AL+L ML G +P A +Y +++
Sbjct: 188 QKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLN-GTSPYAINCKPNIFSYNIIIDE 246
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
LC+ + A +FN+ V+ V S + +LC+ ++
Sbjct: 247 LCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMV 288
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/443 (20%), Positives = 180/443 (40%), Gaps = 66/443 (14%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y S++K L + +I+ + +++ + Y +I L + N A + E
Sbjct: 162 VTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQE 221
Query: 145 V-------KFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
+ NC+ P I N ++ L G A ++F+EM +GV + F
Sbjct: 222 MLNGTSPYAINCK---PNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSAL 278
Query: 196 IWKFCENAKLGQVLSMLDEVRK-RENSMINGSVIAVL----IIHGFCKGKRVEEAFKVLD 250
I C+ M+ E +K E M+ G V + +I GFC ++ A ++
Sbjct: 279 IDTLCKEG-------MVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFL 331
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
+ + +PD I+Y ++ + +V E + + ++G P + + GL +
Sbjct: 332 SMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAG 391
Query: 311 RICEAKELGEVI----VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
++ +AK+L V+ V I L+ L + + A+ FN + +
Sbjct: 392 KVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFE---AMELFNELKSYNMKLDIE 448
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
+ + L LCK K + E+++ LS D+ +Y +M++ C +G++ A + Q M
Sbjct: 449 SFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMM 508
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
+ G P+ L TY+ L+ F + ++
Sbjct: 509 EENGCTPN-----------------------------------LLTYSALLHGFYKNNKL 533
Query: 487 EGALRLFHNMLEKGVAPDATTYT 509
E ++L H M++K V+ A+ YT
Sbjct: 534 EEVVKLLHKMIQKDVSLAASIYT 556
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 130/343 (37%), Gaps = 46/343 (13%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDE 179
Y II L + ++A +FNE+ + + P++ ++L+ L +G + A K +
Sbjct: 240 YNIIIDELCKIGKWKEAKRLFNEMVD--QGVRPDVVTFSALIDTLCKEGMVIEAKKFLET 297
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR--ENSMINGSVIAVLIIHGFC 237
M RG+ F I FC L + + + E +I+ +V+ I+G+C
Sbjct: 298 MMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVL----IYGYC 353
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K VEEA K+ +E+ PD + ++ + L G V + + + + V
Sbjct: 354 KTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLY 413
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG------------------ 339
F+ GL + EA EL + S +D + N LI
Sbjct: 414 ICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKL 473
Query: 340 SVSSIDPR------------------SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
S + P +A + F M E G P L T S L K NK
Sbjct: 474 SQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKL 533
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
+E+V++ + D Y ++ + + RE ++Q
Sbjct: 534 EEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQ 576
>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
Group]
gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
Length = 618
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 182/408 (44%), Gaps = 20/408 (4%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
++ +L Q +A SVF ++ E CN++L L + ++FDEM RG
Sbjct: 112 LVIALSQMALPDEALSVFGRLR---ELPALPACNAILDGLVKAHMLARVWELFDEMLGRG 168
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGFCKGKRVE 243
+ S + + I + + + D++ R I+ +V+ +I C+ +
Sbjct: 169 MVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARR---IDPNVVTYTTMICALCEEDCIG 225
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE------VVLKKKRKLGVAPRTN 297
+A + E++ +P+ Y LM S F+R+ V K G+ P
Sbjct: 226 DAEGLFLEMKEAGMRPNLYTYN------ALMSSHFKRDNIKHALVFYYDLLKCGLVPNDV 279
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFM 356
+ I GL RI EAK + + + V N+LI G+ S + A+ FF +
Sbjct: 280 IFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEI 339
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
I KG P T S + + LC + +V+ + + +YNV++ C SG L
Sbjct: 340 IRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNL 399
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
EA M G++P+V Y+SL++ + + A ++ +M A G N+ TY L
Sbjct: 400 DEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTAL 459
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
I ++ G+++ A L M EKG+ +A T + L++GLC+E +Q A
Sbjct: 460 IHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDA 507
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 134/306 (43%), Gaps = 1/306 (0%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I+ G K + +++ DE+ R P + Y + + G V + V +
Sbjct: 144 ILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARR 203
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAI 350
+ P Y I L E I +A+ L + + NAL+ S D + A+
Sbjct: 204 IDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHAL 263
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
VF+ +++ G VP + L LC+ N+ E ++ + + + YN ++
Sbjct: 264 VFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGA 323
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
SG +EA QE+ RKGL PD + ++ C ++ A + + M SG + N
Sbjct: 324 FRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNA 383
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
YN+LI ++ + G ++ AL M E GV P+ TY+SL++G + ++ A ++ +
Sbjct: 384 AAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTE 443
Query: 531 SVNHDV 536
V V
Sbjct: 444 MVAKGV 449
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 94/183 (51%), Gaps = 3/183 (1%)
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
P A+ F + E +P L + + L K + + E++ + + +YN
Sbjct: 122 PDEALSVFGRLRE---LPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNT 178
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+++ G + +A+ V +M + +DP+V Y +++ A C ED + A+ L+ +M +G
Sbjct: 179 LINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAG 238
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
NL TYN L+S + I+ AL ++++L+ G+ P+ +T+L++GLCQ + A
Sbjct: 239 MRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAK 298
Query: 526 EVF 528
+F
Sbjct: 299 NIF 301
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 6/156 (3%)
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ + N ++ L + L + + EM +G+ P V YN+L+ AC + + A ++WD
Sbjct: 138 LPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWD 197
Query: 460 QMFASGCSGNLKTYNILISKFSE---VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
QM A N+ TY +I E +G+ EG LF M E G+ P+ TY +L+
Sbjct: 198 QMVARRIDPNVVTYTTMICALCEEDCIGDAEG---LFLEMKEAGMRPNLYTYNALMSSHF 254
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ N++ A + + ++ I +T + LC+
Sbjct: 255 KRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQ 290
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 96/227 (42%), Gaps = 12/227 (5%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQG--K 133
QQ + +Y+ ++ S ++ ++++ +++++ ++ +V + SLI G K
Sbjct: 375 QQSGIALNAAAYNVLIDEYCKSGNLD--EALVTCTRMSEVGVEPNVVTY--SSLIDGHSK 430
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
N + ++ + + + P + +L+ A +G +D A + EM +G+ + I
Sbjct: 431 NGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAIT 490
Query: 192 FGVFIWKFCENAKLGQVLSMLDEV----RKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
V + C ++ + + E + +N I SV + +I+G + EA
Sbjct: 491 VSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACH 550
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
+R PD Y +V ++G V ++ K+GV P
Sbjct: 551 FFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKP 597
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/472 (21%), Positives = 206/472 (43%), Gaps = 36/472 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+ + K L IN ++++++ + + Y +I Q N ++A ++ E
Sbjct: 352 VTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKE 411
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + + LL L +D A K+F EM G+ I + I C+ +
Sbjct: 412 MISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGE 471
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ Q + + +++ N +I S+I I+ G C+ ++ +A D L D I Y
Sbjct: 472 VQQAILLYEKMC--SNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILY 529
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
I+ + + G+ E + K+ + G++P + + G + R++ +A+ L + I
Sbjct: 530 NIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTI-- 587
Query: 325 GKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ ++P + T +TL N+ C+ L
Sbjct: 588 ---------------KLHGLEPNAV--------------TYTTLMNV---YCEEGNMQSL 615
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+E+ + A +Y V++ LC +L+E+ ++++M GL PD YN++++A
Sbjct: 616 LELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQA 675
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C+ +R A +L+D+M TYNILI+ F G+++ A L ++ + V +
Sbjct: 676 FCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLN 735
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
YT++++ C + ++ A F + V ++ S + LC+R L+
Sbjct: 736 KYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLV 787
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 186/440 (42%), Gaps = 54/440 (12%)
Query: 133 KNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
+++ + V+NE+K + + ++ L +A+ F + + + S + F
Sbjct: 225 RHSNIMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSF 284
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKR------ENSMINGSVIAVLIIHGFCKGKRVEEAF 246
+ ++C KLG V +V K ++ ++ + ++IHG C + EA
Sbjct: 285 NTIMSRYC---KLGFV-----DVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEAL 336
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
+ +++ +PD + Y I+A+ F+L+G + +++K G P Y I G
Sbjct: 337 DLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGH 396
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIE---KGRVP 363
+ EA +L + ++S F + L+GS+ R V F E G P
Sbjct: 397 CQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCK--SRQVDVAFKLFCEMEANGLRP 454
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSAN----------------------------- 394
L T S L LCK+ + + + +Y+ + +N
Sbjct: 455 DLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYF 514
Query: 395 DYFT------DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
DY D+ YN+M+ G REA + +++ KG+ P + +NSLM C
Sbjct: 515 DYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCIN 574
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
L A++L D + G N TY L++ + E G ++ L L M K + P TY
Sbjct: 575 RKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITY 634
Query: 509 TSLLEGLCQETNLQAAFEVF 528
T +++GLC++ LQ + ++
Sbjct: 635 TVVIKGLCKQWKLQESCQLL 654
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+ A++FF K P++ + + + CK D + ++ + D SYN++
Sbjct: 263 QDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNIL 322
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC +G + EA + +M+ GL+PD+ YN L + L+ A + +M G
Sbjct: 323 IHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGP 382
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ NL TY +LI ++G +E AL+L+ M+ G + T LL LC+ + AF+
Sbjct: 383 NPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFK 442
Query: 527 VFNKSVNHDVMLARSILSTFMISLCRR 553
+F + + + ST + LC++
Sbjct: 443 LFCEMEANGLRPDLITYSTLIHGLCKQ 469
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/423 (18%), Positives = 181/423 (42%), Gaps = 5/423 (1%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
F S +S +L SL SRQ++ + +++ N + D Y +I L + Q+A
Sbjct: 417 FQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAI 476
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
++ ++ N I ++L L G I A FD + + I + + I +
Sbjct: 477 LLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGY 536
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECK 258
+ + + + ++ ++ I+ +++ +++GFC +++ +A ++LD +++ +
Sbjct: 537 IKRGNTREAVKLYKQLGEKG---ISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLE 593
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
P+ + Y + + G++ +L + + + P Y I GL + ++ E+ +L
Sbjct: 594 PNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQL 653
Query: 319 GEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
E + + T D N +I + + D R A ++ M+ PT T + L C
Sbjct: 654 LEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCV 713
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ + L + +Y ++ C G + +A ++M KG + +
Sbjct: 714 YGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRD 773
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
Y++++ C+ L+ AK + M + G + + +L++ F + G + L M+
Sbjct: 774 YSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMI 833
Query: 498 EKG 500
+ G
Sbjct: 834 KSG 836
>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 154/325 (47%), Gaps = 5/325 (1%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+++ GFCK +++ A +L+++ + C PD I Y + G + + + +
Sbjct: 97 MMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQAVEFWRGQLRR 156
Query: 291 GVAPRTNDYREFILGLIVERRICEAKE-LGEVIVSGKFTIDDDVLNALIGSVSSIDP--R 347
G P Y I + A E L ++ + G + D N+L+ S
Sbjct: 157 GCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYP-DLVTYNSLVNFASKEGKYED 215
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
+A++ +N + G P T ++L +LC DE+ E+ ++ + + +YN+++
Sbjct: 216 AALIIYNIL-SHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILI 274
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+ LC G + A +M + PD+ YN+L+ A C+E ++ A +++ + S CS
Sbjct: 275 NGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVFVLLSDSNCS 334
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
L TYN +I + G ++ AL+L++ M+EKG+APD T+ SL+ G C ++ A E+
Sbjct: 335 PGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEI 394
Query: 528 FNKSVNHDVMLARSILSTFMISLCR 552
+ D + S + LCR
Sbjct: 395 LREMGKRDHRINSSAYRLVINGLCR 419
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 134/300 (44%), Gaps = 5/300 (1%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I+H CK + EA K++D + P+ + +G + VLK G
Sbjct: 28 ILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTMVMSG 87
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRS 348
+ P Y + G R++ A +L E + D N +I S+ D
Sbjct: 88 LVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFD--Q 145
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F+ + +G +P L + L + + K + +EV + ++ + D+ +YN +V+
Sbjct: 146 AVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLVN 205
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
F G+ +A +I + G++P+ YNSL+ + C L ++ M +
Sbjct: 206 FASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPP 265
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ TYNILI+ + G +E A+ F M+ + +PD TY +LL LC+E + A +VF
Sbjct: 266 TVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVF 325
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 96/460 (20%), Positives = 191/460 (41%), Gaps = 15/460 (3%)
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
H++ K SL ID + +VN+I +S+ +I L++ ++A V +
Sbjct: 30 HNLCKKGSLMEATKLIDIM---SRVNQIP-NSTCSTNLIRGLVRIGRIERASRVLKTMVM 85
Query: 148 NCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + P++ N ++ + +A+ + ++MS G I + I +N K
Sbjct: 86 S--GLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKF 143
Query: 206 GQVLSML-DEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
Q + ++R+ + I + ++ C R A +VL+++ I C PD + Y
Sbjct: 144 DQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVR---ALEVLEDMAIEGCYPDLVTY 200
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ G + +++ G+ P Y + L E E+ ++
Sbjct: 201 NSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKK 260
Query: 325 GKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
N LI + AI FF M+ + P + T + L LCK DE
Sbjct: 261 TSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDE 320
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
++V+ +LS ++ + +YN ++ L G + EA + +M KG+ PD + SL+
Sbjct: 321 ALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVW 380
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C D + A ++ +M N Y ++I+ ++ A+++ M+ P
Sbjct: 381 GFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISGRYKP 440
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
D Y++L++ + ++ A E+ K + V+ R+IL
Sbjct: 441 DEEIYSTLIKSVADAGMVEEADELHQKLIERKVL--RTIL 478
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 167/398 (41%), Gaps = 13/398 (3%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L+ L G I+ A ++ M G+ I + + + FC+ +L + +L
Sbjct: 62 NLIRGLVRIGRIERASRVLKTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLL------ 115
Query: 219 ENSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE-EFKL 273
E+ ++G V+ II + ++A + R C P I Y I+ E +K
Sbjct: 116 EDMSLSGCPPDVITYNTIIRSLFDNGKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKH 175
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
G+V EV L+ G P Y + E + +A + I+S +
Sbjct: 176 CGTVRALEV-LEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAIT 234
Query: 334 LNALIGSVSSIDPRSAI-VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
N+L+ S+ S + M + PT+ T + L LCK + + + +
Sbjct: 235 YNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMV 294
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ + D+ +YN +++ LC G + EA V + P + YN++++ R +
Sbjct: 295 SENCSPDIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMD 354
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A KL++QM G + + T+ L+ F + ++E A+ + M ++ +++ Y ++
Sbjct: 355 EALKLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVI 414
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
GLC+ + A +V ++ I ST + S+
Sbjct: 415 NGLCRNKRVDIAIQVLEMMISGRYKPDEEIYSTLIKSV 452
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 104/278 (37%), Gaps = 70/278 (25%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A + M ++P + +NL + L + + + V K + + D+ +YN+MV
Sbjct: 41 ATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTMVMSGLVPDVITYNMMVG 100
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW---------- 458
C +LR A ++++M G PDV YN+++ + A + W
Sbjct: 101 GFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQAVEFWRGQLRRGCLP 160
Query: 459 -------------------------DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+ M GC +L TYN L++ S+ G+ E A +
Sbjct: 161 YLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALII 220
Query: 494 HNMLEKGVAPDATTYTSLL-----------------------------------EGLCQE 518
+N+L G+ P+A TY SLL GLC+
Sbjct: 221 YNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKC 280
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
++ A F + V+ + +T + +LC+ ++
Sbjct: 281 GLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMV 318
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D E+ N ++ LC G L EA +I M R P+ + +L+ R + A ++
Sbjct: 21 DEETNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVL 80
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
M SG ++ TYN+++ F + ++ A+ L +M G PD TY +++ L
Sbjct: 81 KTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDN 140
Query: 519 TNLQAAFEVF 528
A E +
Sbjct: 141 GKFDQAVEFW 150
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 208/477 (43%), Gaps = 18/477 (3%)
Query: 66 LALGFFNWASQQPNFTH--SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
+ L FF+WAS+Q N + + S S+L+ L+ R + ++S+LK +K + +
Sbjct: 46 MGLEFFHWASKQSNCGNYLNEFSCSSLLRLLARRRLFSEVESLLKIMKSKDLMPTREAFS 105
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMS 181
+I +A F P++ CNSLL VL G ++ A K++DEM
Sbjct: 106 LVISVFADCGLVDRALE-FYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDEMV 164
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
R E + + C+ K+ ++ E R M N V +I G+CK
Sbjct: 165 DRNGEVDNYTVCIMVKGLCKEGKVEDGWKLI-EKRWGRGCMPN-IVFYNTLIDGYCKKGD 222
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG--SVFEREVVLKKKRKLGVAPRTNDY 299
E A + EL+++ P Y + F G V ++ +V +R L V+ Y
Sbjct: 223 TERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHI--Y 280
Query: 300 REFILGLIVER-RICEAKELGEVIVSGKFTIDDDV--LNALI-GSVSSIDPRSAIVFFNF 355
I RI A +G +I SG D D+ N LI GS S + A
Sbjct: 281 NNIIDAQFKHGCRIEAADTVGWMIKSG---CDPDMATYNILITGSCSCGEVHKAEQLLEQ 337
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
I++G +P + + L N CK+ + +++ +S + D+ +Y ++ L +G
Sbjct: 338 AIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGE 397
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ A V +M KG+ PD + YN LM C++ L AK L +M + +
Sbjct: 398 VDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITAT 457
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
L+ F G+ E A +LF +EKG+ P Y ++++G C+ ++ A F + +
Sbjct: 458 LVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMI 514
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 132/329 (40%), Gaps = 41/329 (12%)
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
S++ VL+ HG +VE A KV DE+ R + D I+ + G V + +++
Sbjct: 142 SLLNVLVKHG-----KVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIE 196
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSI 344
K+ G P Y N LI G
Sbjct: 197 KRWGRGCMPNIVFY-----------------------------------NTLIDGYCKKG 221
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
D A V F + KG +PT+ T + CK+ K + + ++ +S + YN
Sbjct: 222 DTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYN 281
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
++ G EA + M + G DPD++ YN L+ C + A++L +Q
Sbjct: 282 NIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKR 341
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G N +Y LI + + GE AL L M E+G PD TY +L+ GL + A
Sbjct: 342 GLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVA 401
Query: 525 FEVFNKSVNHDVMLARSILSTFMISLCRR 553
V NK V V+ +I + M LC++
Sbjct: 402 LTVRNKMVEKGVLPDANIYNVLMSGLCKK 430
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 145/381 (38%), Gaps = 38/381 (9%)
Query: 151 DIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS 210
D+ I N+++ G A M G + + + I C ++ +
Sbjct: 274 DVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQ 333
Query: 211 MLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
+L++ KR ++ V +IH +CK A +L ++ R KPD + Y +
Sbjct: 334 LLEQAIKR--GLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHG 391
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
+ G V V K + GV P N Y + GL + R+ AK L ++ D
Sbjct: 392 LIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPD 451
Query: 331 DDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
+ L+ G + D A F IEKG P +
Sbjct: 452 AFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVV----------------------- 488
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
YN M+ C G +++A + M + PD Y+++++ + +
Sbjct: 489 ------------GYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMN 536
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
L A +++ M C N+ TY +LI+ F G+I A + F ML + P+ TYT
Sbjct: 537 DLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYT 596
Query: 510 SLLEGLCQETNLQAAFEVFNK 530
L+ C+ NL A F +
Sbjct: 597 ILIGCFCKGVNLTKACSFFEQ 617
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 104/484 (21%), Positives = 196/484 (40%), Gaps = 25/484 (5%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQ-GKNTQKAFSVFNE 144
+Y +I+ + +D +L ++ + + +Y II + + G + A +V
Sbjct: 244 TYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWM 303
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+K C+ P++ N L+ S G + A ++ ++ RG+ + + + I +C+
Sbjct: 304 IKSGCD---PDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQ 360
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+ + L +L ++ E V +IHG V+ A V +++ + PD
Sbjct: 361 GEYLRALDLL--IKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDAN 418
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y ++ G + +V+L + VAP + G I EAK+L E+
Sbjct: 419 IYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELT 478
Query: 323 VSGKFTIDDDVL--NALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+ ID V+ NA+I + A++ F MI+ P T S + K N
Sbjct: 479 IEK--GIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMN 536
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ ++ ++ ++ +Y ++++ C SG + A ++M L P+V Y
Sbjct: 537 DLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYT 596
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF------------SEVGEIE 487
L+ C+ L A ++QM C N TYN L++ SE E
Sbjct: 597 ILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENS 656
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
L F M+ G A +Y S+L LCQ ++ A + +K ++ + L +
Sbjct: 657 LVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALL 716
Query: 548 ISLC 551
LC
Sbjct: 717 HGLC 720
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 203/484 (41%), Gaps = 48/484 (9%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S ++Y I+ S + A D + K TL++S+Y II + Q N ++A ++
Sbjct: 379 SLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALV 438
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYI-----DNALKMFDEMSHRGVEFSTIGFGVFIW 197
E++ D I ++++ DGY L +F + G + + +G I
Sbjct: 439 REMEEEGIDAPIAIYHTMM-----DGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLIN 493
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
+ + K+ + L + V K E N + ++I+GF K K AF V +++
Sbjct: 494 LYTKVGKISKALE-VSRVMKEEGVKHNLKTYS-MMINGFVKLKDWANAFAVFEDMVKEGM 551
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL--------------------------- 290
KPD I Y + F MG++ +K+ +KL
Sbjct: 552 KPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLE 611
Query: 291 --------GVAPRTNDYREFILGLIVERRICEAKE-LGEVIVSGKFTIDDDVLNALIGSV 341
G P + + I GL+ +R++ +A E L E+ ++G + + G
Sbjct: 612 VFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYA 671
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
S D A +F + +G + T L K CK + + V K +SA + +
Sbjct: 672 SVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 731
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
YN+++ G + EA +IQ+MK++G+ PD+ Y S + AC + + A + ++M
Sbjct: 732 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM 791
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
A G N+KTY LI ++ E AL + M G+ PD Y LL L ++
Sbjct: 792 EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTSLLSRASI 851
Query: 522 QAAF 525
A+
Sbjct: 852 AEAY 855
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 157/373 (42%), Gaps = 3/373 (0%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
I SL+ A ++ AL +M G+E S + + V + F + DE
Sbjct: 347 IYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEA 406
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
KR + +N S+ II+ C+ +E A ++ E+ Y + + + ++
Sbjct: 407 -KRIHKTLNASIYGK-IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVA 464
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ +V K+ ++ G P Y I +I +A E+ V+ + +
Sbjct: 465 DEKKGLIVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYS 524
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I G V D +A F M+++G P + +N+ C D ++ K +
Sbjct: 525 MMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKL 584
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ ++ +++ SG +R + V M+R G P V +N+L+ + + A
Sbjct: 585 RHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKA 644
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++ D+M +G S N TY ++ ++ VG+ A F + +G+ D TY +LL+
Sbjct: 645 VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKA 704
Query: 515 LCQETNLQAAFEV 527
C+ +Q+A V
Sbjct: 705 CCKSGRMQSALAV 717
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/381 (19%), Positives = 154/381 (40%), Gaps = 44/381 (11%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
FG+ + + + + + +R R + S I +IH + G+ +EEA + +
Sbjct: 313 FGLMVKFYGRRGDMHRARETFERMRAR--GITPTSRIYTSLIHAYAVGRDMEEALSCVRK 370
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI---- 307
++ + + Y ++ F G+ + + +++ + Y + I
Sbjct: 371 MKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCN 430
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
+ER +E+ E + I +++ G D + ++ F + E G PT+ T
Sbjct: 431 MERAEALVREMEEEGIDAPIAIYHTMMD---GYTMVADEKKGLIVFKRLKECGFTPTVVT 487
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
L K K + +EV +V+ ++++Y++M++ A+ V ++M
Sbjct: 488 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 547
Query: 428 RKGLDPDVSFYNSLMEACC-----------------------------------REDLLR 452
++G+ PDV YN+++ A C + +R
Sbjct: 548 KEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMR 607
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
+ +++D M GC + T+N LI+ E ++E A+ + M GV+ + TYT ++
Sbjct: 608 RSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 667
Query: 513 EGLCQETNLQAAFEVFNKSVN 533
+G + AFE F + N
Sbjct: 668 QGYASVGDTGKAFEYFTRLQN 688
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 59/316 (18%), Positives = 122/316 (38%), Gaps = 39/316 (12%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
++++++ L RQ+ +L ++ + ++ + Y I+ +T KAF F +
Sbjct: 627 TFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL 686
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI--WKFCENA 203
+ ++ +LL G + +AL + EMS R + ++ + + I W A
Sbjct: 687 QNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGW-----A 741
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFC-KGKRVEEAFKVLDELRIRECKPDFI 262
+ G V D +++ + + + C K + A + ++E+ KP+
Sbjct: 742 RRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIK 801
Query: 263 AYRIVAEEFKLMGSVFEREV-VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
Y + + + S+ E+ + ++ + +G+ P Y + L+ I EA
Sbjct: 802 TYTTLIKGW-ARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTSLLSRASIAEA-----Y 855
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK-RNK 380
I SG TI + M+E G + + T + S+ LCK
Sbjct: 856 IYSGVMTICKE-----------------------MVEAGLIVDMGTAVHWSRCLCKIEGS 892
Query: 381 SDELVEVYKVLSANDY 396
EL E + D+
Sbjct: 893 GGELTETLQKTFPPDW 908
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V FY R D+ R A++ +++M A G + + Y LI ++ ++E AL
Sbjct: 317 VKFYGR------RGDMHR-ARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVR 369
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M E+G+ TY+ ++ G + N +AA F+++ L SI + + C+
Sbjct: 370 KMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQ 427
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 191/436 (43%), Gaps = 42/436 (9%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
+I L + + T + + +F E+ + CNSLL LA +G + ++ ++M
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK-RENSMINGSV-----IAVLIIHGFCK 238
++ + + FG+ I C+ ++ L +L+++ +E+ I+ SV I +I G CK
Sbjct: 336 IQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCK 395
Query: 239 GKRVEEAFKVLDELRIRE-CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
R +E +++ +R ++ C PD I Y + + F G + + + + + K GVAP
Sbjct: 396 VGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVV 455
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMI 357
+ G+ R+ SA+ FF
Sbjct: 456 TVNTLVGGMCRTGRV----------------------------------SSAVNFFVEAQ 481
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+G T + L C N ++ +E++ + + D Y ++S +GR+
Sbjct: 482 RRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMA 541
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+A V+ E+K+ G+ PD YN+L+ CR + ++ +M +G + TYN LI
Sbjct: 542 DASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLI 601
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ S+ G+++ A ++ M++ GV P TY +++ C N A E+F +
Sbjct: 602 AYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKV 661
Query: 538 LARSILSTFMI-SLCR 552
+++ +I SLC+
Sbjct: 662 PPNTVIYNILINSLCK 677
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 166/374 (44%), Gaps = 7/374 (1%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALK 175
D +Y +I L + Q+ + ++ + P+ N L+ G I+ +
Sbjct: 382 DVVIYNTLIDGLCKVGRQQEGLGLMERMRSQ-KGCAPDTITYNCLIDGFCKAGEIEKGKE 440
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+FDEM+ GV + + + C ++ ++ E ++R M +V +I+
Sbjct: 441 LFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRR--GMKGDAVTYTALINA 498
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
FC E+A ++ +E+ C PD I Y + F G + + VL + +KLG+ P
Sbjct: 499 FCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPD 558
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFN 354
T Y I G + E+ + + D N LI S + D + A
Sbjct: 559 TVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMR 618
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL-SANDYFTDMESYNVMVSFLCTS 413
MI+ G VPT++T + C +E +E++K + +A+ + YN++++ LC +
Sbjct: 619 KMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKN 678
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
+++ A ++++MK G+ P+ + YN++ + E L + D+M C+ + T
Sbjct: 679 NKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITM 738
Query: 474 NILISKFSEVGEIE 487
IL S VGEIE
Sbjct: 739 EILTEWLSAVGEIE 752
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 118/537 (21%), Positives = 225/537 (41%), Gaps = 47/537 (8%)
Query: 26 PARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHH----SLALGFFNW----ASQQ 77
P +W L+QL DS S R+ Y +T S AL F N+ +
Sbjct: 59 PGNEWNT---TQLNQLLFTDSPPSSSSPRLF--YQITRRLPSSSQALKFLNYLQNNSPSS 113
Query: 78 PNFTHSPLSY--HSILKSLSLSRQINA-IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN 134
P+ T S LSY +I + NA + + K K I L + F++ + + +
Sbjct: 114 PD-TQSLLSYTFQAIFELAFCEPDSNANLSRLYKTSKELNIPLTVNAASFLLRASGRSEL 172
Query: 135 TQKAFSVFNEVKFNCEDIGPEICNSLL-----AVLASDGYIDNALKMFDEMSHRGVEFS- 188
+++ +FN D+ P + N+ L ++L G + +ALK+ DEM + +
Sbjct: 173 VEESLILFN-------DLDPSVKNTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNC 225
Query: 189 --TIGFGVFIWKFCENAKLGQVLSMLDEV-----RKRENSMINGSVIAVLIIHGFCKGKR 241
G ++ F + + L DE+ + E+ ++ S +I C+ ++
Sbjct: 226 RPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRK 285
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+ + E+ + A + G+ +++K ++ + P +
Sbjct: 286 TNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGI 345
Query: 302 FILGLIVERRICEAKELGEVIVSGK------FTIDDDVL--NALIGSVSSID-PRSAIVF 352
I + RR+ +A E+ E + GK +++ DV+ N LI + + + +
Sbjct: 346 LINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGL 405
Query: 353 FNFM-IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
M +KG P T + L CK + ++ E++ ++ ++ + N +V +C
Sbjct: 406 MERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMC 465
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+GR+ A E +R+G+ D Y +L+ A C + A +L+++M SGCS +
Sbjct: 466 RTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAI 525
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
Y LIS FS+ G + A + + + G+ PD Y +L+ G C+ FE+
Sbjct: 526 VYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEML 582
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 210/483 (43%), Gaps = 48/483 (9%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI------QGKNTQKAFS 140
Y S++ + ++ R + S ++++K + + Y ++ Q N +A S
Sbjct: 340 YTSLIHAYAVGRDMEEALSCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAES 399
Query: 141 VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+ E++ D +I ++++ G + L +F + G S I +G I +
Sbjct: 400 LVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMY- 458
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
K+G+V L+ + E++ I ++ ++I+GF K K AF V +++ KP
Sbjct: 459 --TKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKP 516
Query: 260 DFIAYRIVAEEFKLMGSV----------------------------FEREVVLKKK---- 287
D + Y + + F MG++ F R +++
Sbjct: 517 DVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIF 576
Query: 288 ---RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
R+ G P + + +LGL+ +R++ +A E+ + + + D+ ++ +++
Sbjct: 577 DMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAAL 636
Query: 345 -DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
D A +F + +G + T L K CK + + V + +SA + + Y
Sbjct: 637 GDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVY 696
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE-DLLRPAKKLWDQMF 462
N+++ G + EA ++Q+MK++G+ PD+ Y S + ACC+ D+LR K + +M
Sbjct: 697 NILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTI-QEME 755
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
A G N+KTY LI ++ E ALR F M G+ PD Y L+ L +
Sbjct: 756 ALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYHCLMTSLLSRATVA 815
Query: 523 AAF 525
A+
Sbjct: 816 EAY 818
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 176/406 (43%), Gaps = 17/406 (4%)
Query: 131 QGKNTQKAFSVFNEVKFNCE-DIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
Q +N Q S F +K + G ++ A G + A + F+ M RG+ S+
Sbjct: 283 QPENWQAVVSAFERIKKPARREFG-----LMVGYYARRGDMHRARQTFESMRVRGIYPSS 337
Query: 190 IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKV 248
+ I + + + LS VRK + + S++ +++ GF K +++ +
Sbjct: 338 HVYTSLIHAYAVGRDMEEALSC---VRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNM 394
Query: 249 -LDELRIRECKPDFIA-----YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
E +RE + + I Y + + ++G+ + +V K+ ++ G AP Y
Sbjct: 395 DRAESLVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCL 454
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGR 361
I ++ +A E+ +++ S + + LI G + D +A F +I+ G
Sbjct: 455 INMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGL 514
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P + +N+ K C D + + K + + ++ ++ +G +R A
Sbjct: 515 KPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALE 574
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+ M+R G P V +N+L+ + + A ++ D+M +G S + TY +++ ++
Sbjct: 575 IFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYA 634
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
+G+ A F + +G+ D TY +LL+ C+ +Q+A V
Sbjct: 635 ALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAV 680
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 154/378 (40%), Gaps = 29/378 (7%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
FG+ + + + + + +R R + S + +IH + G+ +EEA + +
Sbjct: 305 FGLMVGYYARRGDMHRARQTFESMRVR--GIYPSSHVYTSLIHAYAVGRDMEEALSCVRK 362
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFER------EVVLKKKRKLGVAPRTNDYREFILG 305
++ + + Y IV F +G+ + E ++++ + G+ + Y + G
Sbjct: 363 MKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNG 422
Query: 306 ----------LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNF 355
LIV +R+ E VI G LI + + S + +
Sbjct: 423 YTMIGNEEKCLIVFKRLKECGFAPSVISYG----------CLINMYTKMGKVSKALEVSK 472
Query: 356 MIEKGRVP-TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+E + + T S L K V++ + + D+ YN ++ C G
Sbjct: 473 MMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMG 532
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ A +++EM++K P + ++ R +R A +++D M SGC + T+N
Sbjct: 533 NMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFN 592
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
L+ E ++E A+ + M GV+PD TYT+++ G + AFE F K N
Sbjct: 593 ALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNE 652
Query: 535 DVMLARSILSTFMISLCR 552
+ L + + C+
Sbjct: 653 GLELDVFTYEALLKACCK 670
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 113/271 (41%), Gaps = 19/271 (7%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
++++++ L RQ+ +L ++ + ++ D Y I+ +T KAF F ++
Sbjct: 590 TFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKL 649
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI--WKFCENA 203
+ ++ +LL G + +AL + EMS + + +T + + I W A
Sbjct: 650 RNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGW-----A 704
Query: 204 KLGQVLSMLDEVRKRENSMINGSV-IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+ G V D +++ + + + I+ CK + A K + E+ KP+
Sbjct: 705 RRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVK 764
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKL-GVAPRTNDYREFILGLIVERRICEAKELGEV 321
Y + + S+ E+ + ++ KL G+ P Y + L+ + EA
Sbjct: 765 TYTTLIHGWAC-ASLPEKALRCFEEMKLAGLKPDKAVYHCLMTSLLSRATVAEA-----Y 818
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRSAIVF 352
I SG +I +I S ++D +A+ +
Sbjct: 819 IYSGILSI----CREMIESELTVDMGTAVYW 845
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 197/427 (46%), Gaps = 15/427 (3%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSL-IQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLL 161
SVL +V D++ + +I L ++GK ++ V V+ C+ P++ NS++
Sbjct: 134 SVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ---PDVVTYNSIV 190
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
+ G AL + +M R V+ + I C + + +S+ E+ E
Sbjct: 191 NGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM---ETK 247
Query: 222 MINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
I SV+ ++ G CK + + +L ++ RE P+ I + ++ + F G + E
Sbjct: 248 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 307
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+ K+ G++P Y + G ++ R+ EA + +++V K + D +LI
Sbjct: 308 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 367
Query: 341 ---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
V +D + F + ++G V T S L + C+ K E+++ + ++
Sbjct: 368 YCMVKRVD--DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 425
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D+ +Y +++ LC +G+L +A + +++++ +D + Y +++E C+ + A L
Sbjct: 426 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 485
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ + G N+ TY ++IS + G + A L M E G AP+ TY +L+ +
Sbjct: 486 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 545
Query: 518 ETNLQAA 524
+ +L A+
Sbjct: 546 DGDLTAS 552
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 186/385 (48%), Gaps = 9/385 (2%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D+A+ +F EM S + F F F A+ Q +LD ++ E + I ++ +
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRF---FSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 116
Query: 231 -LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
++I+ FC+ + A+ VL ++ +PD + + + L G V E V++ + +
Sbjct: 117 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 176
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDP 346
G P Y + G+ A +L + D + +I S+ ID
Sbjct: 177 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID- 235
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+AI F M KG ++ T ++L + LCK K ++ + K + + + ++ ++NV+
Sbjct: 236 -AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 294
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ G+L+EA + +EM +G+ P++ YN+LM+ C ++ L A + D M + C
Sbjct: 295 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 354
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
S ++ T+ LI + V ++ +++F N+ ++G+ +A TY+ L++G CQ ++ A E
Sbjct: 355 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 414
Query: 527 VFNKSVNHDVMLARSILSTFMISLC 551
+F + V+H V+ + LC
Sbjct: 415 LFQEMVSHGVLPDVMTYGILLDGLC 439
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/477 (19%), Positives = 196/477 (41%), Gaps = 48/477 (10%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S + + +++ ++Q N + KQ+++N I + +I + T A+SV
Sbjct: 77 SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 136
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+V + N+L+ L +G + A+ + D M G + + + + C +
Sbjct: 137 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 196
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
G LD +RK E + V II C+ ++ A + E+ + K
Sbjct: 197 ---GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 253
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ Y + G + ++LK + P + + + E ++ EA EL
Sbjct: 254 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL--- 310
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
+ MI +G P + T + L C +N+
Sbjct: 311 -------------------------------YKEMITRGISPNIITYNTLMDGYCMQNRL 339
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
E + ++ N D+ ++ ++ C R+ + V + + ++GL + Y+ L
Sbjct: 340 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 399
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
++ C+ ++ A++L+ +M + G ++ TY IL+ + G++E AL +F ++ + +
Sbjct: 400 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 459
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSILSTFMIS-LCRR 553
YT+++EG+C+ ++ A+ +F K V +VM T MIS LC++
Sbjct: 460 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY-----TVMISGLCKK 511
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 111/511 (21%), Positives = 211/511 (41%), Gaps = 75/511 (14%)
Query: 51 LVARVINPYLLTHHSLALGFFNWAS-QQPNFTH--------SP--LSYHSILKSLSLSRQ 99
+V+R I P ++T + L F Q+ N + SP ++Y++++ + +
Sbjct: 279 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 338
Query: 100 INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS 159
++ +++L + NK + D + +I K VF + +
Sbjct: 339 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 398
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ G I A ++F EM GV + +G+ + C+N KL + L + ++++K
Sbjct: 399 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK-- 456
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+ M G V+ II G CKG +VE+A+ + L + KP+ + Y ++ GS+ E
Sbjct: 457 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 516
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD----VLN 335
++L+K + G AP Y I + + + + +L E + S F+ D V++
Sbjct: 517 ANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 576
Query: 336 ALIGSVSSIDPR------------------------SAIVFF-----NFMIEKGRVPTLS 366
L+ ++ + R S++ F N + V T+
Sbjct: 577 MLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVNTIE 636
Query: 367 TL----SNLSKNLCKRNKSDELVEV----YKVLSANDYFT------------DMESYNVM 406
+ L+++L K +S L + +VL N+ T D+E
Sbjct: 637 ARGMNSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLELPTDA 696
Query: 407 VSFLCTSGRLRE---------AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
V + +GR+R A + +EM ++G+ P+ Y+SL++ C+E+ L A ++
Sbjct: 697 VHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQM 756
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
D M G S L+ K + E EG
Sbjct: 757 LDLMVTKGDSDIRYLLAGLMRKKRKGSETEG 787
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 104/216 (48%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
L + I AI F MI +P+L S + + + + +++ K L N
Sbjct: 50 LRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI 109
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ + N+M++ C + AY V+ ++ + G +PD + +N+L++ E + A
Sbjct: 110 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 169
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L D+M +GC ++ TYN +++ G+ AL L M E+ V D TY+++++ LC
Sbjct: 170 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 229
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++ + AA +F + + + ++ + LC+
Sbjct: 230 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 265
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
A L M+++G+AP+ TY+SL++G C+E L A ++ + V R +L+ M
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDSDIRYLLAGLM 776
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 188/461 (40%), Gaps = 54/461 (11%)
Query: 75 SQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN 134
S PN +SY++++ Q++ ++ + I + Y +I L + +
Sbjct: 199 SCPPNL----VSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQV 254
Query: 135 TQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
+A VF ++ + + P I L+ S G ++M EMS G+E +
Sbjct: 255 VDRAEGVFQQMID--KGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTY 312
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV-----IAVLIIHGFCKGKRVEEAFK 247
G+ + C+ K E RK +SMI + I +I+HG+ + E
Sbjct: 313 GLLLDYLCKKGKC-------TEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHS 365
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
LD + P+ + IV F + E + K R+ G++P +Y I L
Sbjct: 366 FLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALC 425
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
+LG V DD L FN MI +G P +
Sbjct: 426 ---------KLGRV--------DDAELK-----------------FNQMINEGVAPNIVV 451
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
++L LC +K ++ E++ + ++ +N ++ LCT GR+ +A +I M+
Sbjct: 452 FTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLME 511
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
R G PD+ YN+L+ C A KL D M + G N TYN L+ + G I+
Sbjct: 512 RVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRID 571
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
A +F ML G+ P TY ++L GL + A E++
Sbjct: 572 DAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELY 612
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 175/390 (44%), Gaps = 23/390 (5%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++ ++G +D A +F +M+ +G+ + + + + I C+ QV+ + V +
Sbjct: 208 NTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCK----AQVVDRAEGVFQ 263
Query: 218 R--ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ + + V +IHG+ + +E ++L E+ +PD Y ++ + G
Sbjct: 264 QMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKG 323
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E + + G+ P + Y + G + + E +++V + + + N
Sbjct: 324 KCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFN 383
Query: 336 ---------ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
A+IG I FN M ++G P + + L LCK + D+
Sbjct: 384 IVFCAFAKKAMIGEAMDI--------FNKMRQQGLSPNVVNYATLIDALCKLGRVDDAEL 435
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
+ + ++ + +V LCT + +A + EM +G+ P+V F+N++M C
Sbjct: 436 KFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLC 495
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
E + A++L D M G ++ +YN LI VG+ + A +L ML G+ P+
Sbjct: 496 TEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNEC 555
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
TY +LL G C++ + A+ VF + +++ +
Sbjct: 556 TYNTLLHGYCRDGRIDDAYSVFQEMLSNGI 585
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 158/358 (44%), Gaps = 7/358 (1%)
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDEL---RI 254
C+ ++G+ + +L +R+ +V++ ++ GFC R EEA ++L + ++
Sbjct: 140 LCDAKRVGEAMGVL--LRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQV 197
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
R C P+ ++Y V F G V + + G+ P Y I GL + +
Sbjct: 198 RSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDR 257
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSK 373
A+ + + ++ + LI SI +V M G P T L
Sbjct: 258 AEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLD 317
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
LCK+ K E +++ + D+ Y +++ T G L E + + M G+ P
Sbjct: 318 YLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISP 377
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+ +N + A ++ ++ A ++++M G S N+ Y LI ++G ++ A F
Sbjct: 378 NHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKF 437
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+ M+ +GVAP+ +TSL+ GLC + A E+F + VN + +T M +LC
Sbjct: 438 NQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLC 495
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 197/444 (44%), Gaps = 16/444 (3%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y IL + ++ + S L + N I+ + ++ + + + +A +FN K
Sbjct: 347 YGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFN--K 404
Query: 147 FNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + P + N +L+ L G +D+A F++M + GV + + F ++ C K
Sbjct: 405 MRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDK 464
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ + E+ N I+ +V+ I+ C RV +A +++D + +PD I+
Sbjct: 465 WEKAGELFFEMV---NQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIIS 521
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + L+G E +L +G+ P Y + G + RI +A + + ++
Sbjct: 522 YNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEML 581
Query: 324 SGKFT----IDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
S T + +L+ L + + + ++ N MI G+ ++ T + + L K N
Sbjct: 582 SNGITPVVVTYNTILHGLFKTRRFSEAKE--LYLN-MITSGKQWSIYTYNIILNGLSKNN 638
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
DE +++++ L + D D+ ++N+M+ L GR +A + + GL PDV+ Y
Sbjct: 639 CVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYR 698
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+ E E L ++ +M SGC+ N N L+ + G+I A + EK
Sbjct: 699 LIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEK 758
Query: 500 GVAPDATTYTSLLEGLCQETNLQA 523
+ +A+T TS+L L QA
Sbjct: 759 NFSLEAST-TSMLISLFSREEHQA 781
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/445 (20%), Positives = 185/445 (41%), Gaps = 14/445 (3%)
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNAL 174
I D S+Y I+ + S + + N I N + A I A+
Sbjct: 340 IKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAM 399
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLII- 233
+F++M +G+ + + + I C KLG+V D+ + N MIN V +++
Sbjct: 400 DIFNKMRQQGLSPNVVNYATLIDALC---KLGRV----DDAELKFNQMINEGVAPNIVVF 452
Query: 234 ----HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+G C + E+A ++ E+ + P+ + + + G V + + ++ +
Sbjct: 453 TSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMER 512
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRS 348
+G P Y I G + + EA +L ++++S ++ N L+ G
Sbjct: 513 VGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDD 572
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A F M+ G P + T + + L K + E E+Y + + + +YN++++
Sbjct: 573 AYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILN 632
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L + + EA + Q + K L D+ +N ++ A ++ A L+ + A+G
Sbjct: 633 GLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVP 692
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TY ++ E G +E +F M + G AP++ L+ L ++ A
Sbjct: 693 DVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYL 752
Query: 529 NKSVNHDVMLARSILSTFMISLCRR 553
+K + L S ++ +ISL R
Sbjct: 753 SKIDEKNFSLEAST-TSMLISLFSR 776
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 103/244 (42%), Gaps = 38/244 (15%)
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT---DMESYNVMV 407
V M E G P + + + L K C N+++E +E+ +++ + ++ SYN ++
Sbjct: 152 VLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVI 211
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+ T G++ +AY + +M +G+ P+V Y +++ C+ ++ A+ ++ QM G
Sbjct: 212 NGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVR 271
Query: 468 GNLKTYNILISKFSEVGEIEGALR-----------------------------------L 492
N+ TY LI + +G+ + +R L
Sbjct: 272 PNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKL 331
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
F +M+ KG+ PD + Y +L G + L + V + + I + + +
Sbjct: 332 FDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAK 391
Query: 553 RVLI 556
+ +I
Sbjct: 392 KAMI 395
>gi|115445137|ref|NP_001046348.1| Os02g0226900 [Oryza sativa Japonica Group]
gi|49388538|dbj|BAD25660.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388672|dbj|BAD25856.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535879|dbj|BAF08262.1| Os02g0226900 [Oryza sativa Japonica Group]
Length = 637
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 132/575 (22%), Positives = 237/575 (41%), Gaps = 78/575 (13%)
Query: 17 IISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQ 76
+ +A+ R +PLL+ + GLR +L+ + + V+ F A+
Sbjct: 51 VCAAARILRSHASPSPLLDLADYLRGLRLTLTAAEASEVVKALYGDPPLALAFFRFAAAS 110
Query: 77 QPNFTHSPLSYHSILKSLSLSR--------------------QINAIDS----------- 105
P F H SY+ IL L +R I+ I+
Sbjct: 111 LPGFRHDAFSYNRILALLFRTRAGPSEALRLVADMERDGVAGNISTINLLVGMGGGGVEM 170
Query: 106 --VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAV 163
L+ + L Y+ I+ + ++ + K F V+ E++ + N LL
Sbjct: 171 ERCLELASKWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDA 230
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
LA G +D A ++F++M + + + I + + + LS DE+ +
Sbjct: 231 LAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSK----- 285
Query: 224 NGSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
G V+ ++ II K K V++ VL ++ +C+P+ Y I + G +
Sbjct: 286 -GCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHR 344
Query: 280 REVVL----------------KKKRKLGVAPRTN-------------DYREFILGLIV-- 308
VL K K G A + D F+ L V
Sbjct: 345 LNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLC 404
Query: 309 -ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV-FFNFMIEKGRVPTLS 366
+ EA +L ++ D + N + ++ + S I F+ M G +P +
Sbjct: 405 NAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVF 464
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T + + + + D+ E+++V+ A+ D+ +YN +++ L G L EA+ + +EM
Sbjct: 465 TYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEM 524
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
+ KG DPDV Y+ L+E + + + A L+D+M + GC+ N+ TYNIL+ G+
Sbjct: 525 QEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKT 584
Query: 487 EGALRLFHNMLEKGVAPDATTYTSL--LEGLCQET 519
E A +L+ M ++G+ PD+ TY+ L LE Q T
Sbjct: 585 EEAHKLYETMKQQGLIPDSITYSILERLESRSQRT 619
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y +V S + + + V +EM+RKG D+ YN L++A + ++ A ++++ M
Sbjct: 188 TYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDM 247
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
C + TY ILI + G L F M+ KG + + +++E L + +
Sbjct: 248 KQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMV 307
Query: 522 QAAFEVFNKSVNHD 535
V +K V +D
Sbjct: 308 DKVIFVLSKMVEND 321
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 116/299 (38%), Gaps = 37/299 (12%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I+ + + V + F+V +E+R + K D AY ++ + G V + V + ++
Sbjct: 192 IVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKH 251
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
P Y I + G+ + KF +
Sbjct: 252 CVPDAYTYTILI------------RMSGKAGRTSKF----------------------LS 277
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
FF+ M+ KG V L + + + L K D+++ V + ND + +Y++ + L
Sbjct: 278 FFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILA 337
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
T G+L V+ R + S Y+ L+++ C+ A ++ +M+ S G+
Sbjct: 338 TEGQLHRLNEVLDICSRFM---NRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRD 394
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ ++ + A+ L H M EKG+ D Y + L + + +F+K
Sbjct: 395 AFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDK 453
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 201/470 (42%), Gaps = 50/470 (10%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
LAL FF + F H+PL++ +++ L++ Q++++ +L+Q+K+ ++ +
Sbjct: 58 LALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISV 117
Query: 126 IPSLIQGKNTQKAFSVFNEVK-FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
I Q ++A +F +K F C D +I N +L L + I ++ +M G
Sbjct: 118 ISVYRQVGLAERAVEMFYRIKEFGC-DPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 176
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
E + + V ++ CK +V+
Sbjct: 177 FEPNVFTYNV-------------------------------------LLKALCKNNKVDG 199
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG--VAPRTNDYREF 302
A K+L E+ + C PD ++Y V +G ++K+ R+L P + Y
Sbjct: 200 AKKLLVEMSNKGCCPDAVSYTTVISSMCEVG-------LVKEGRELAERFEPVVSVYNAL 252
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGR 361
I GL E A EL +V + + + LI + +S A F M+++G
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVY-KVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P + TLS+L K R + + ++++ +++ ++ +YN +V C+ G + +A
Sbjct: 313 HPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAV 372
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
V M+ G P++ Y SL+ + L A +W++M SGC N+ Y ++
Sbjct: 373 SVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEAL 432
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ + A L M ++ AP T+ + ++GLC L A +VF +
Sbjct: 433 CRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 173/397 (43%), Gaps = 36/397 (9%)
Query: 173 ALKMFDEMSHRGV-EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR-----ENSMINGS 226
AL F +++ + + + + F V I K + ++ V +L +++ + E+ I S
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFI--S 116
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRE--CKPDFIAYRIVAEEFKLMGSVFEREVVL 284
VI+V G +R E F RI+E C P Y V + + +V
Sbjct: 117 VISVYRQVGL--AERAVEMF-----YRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVY 169
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV-LNALIGSVSS 343
+ ++ G P Y + L ++ AK+L V +S K D V +I S+
Sbjct: 170 RDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKL-LVEMSNKGCCPDAVSYTTVISSMCE 228
Query: 344 IDPRSAIVFFNFMIEKGRV------PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
+ ++++GR P +S + L LCK + E+ + +
Sbjct: 229 VG----------LVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGIS 278
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
++ SY+ +++ LC SG++ A+ + +M ++G P++ +SL++ C A L
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDL 338
Query: 458 WDQMFAS-GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
W+QM G N+ YN L+ F G I A+ +F +M E G +P+ TY SL+ G
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ +L A ++NK + + + + +LCR
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRH 435
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 158/378 (41%), Gaps = 17/378 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQG----KNTQKAFS 140
+SY +++ L S QI S L Q+ K ++Y + SL++G T A
Sbjct: 282 ISYSTLINVLCNSGQIELAFSFLTQML--KRGCHPNIY--TLSSLVKGCFLRGTTFDALD 337
Query: 141 VFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
++N++ + P + N+L+ S G I A+ +F M G + +G I
Sbjct: 338 LWNQM-IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING 396
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
F + L + + +++ + V+ ++ C+ + +EA +++ + C
Sbjct: 397 FAKRGSLDGAVYIWNKMLT--SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCA 454
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKK-KRKLGVAPRTNDYREFILGLIVERRICEAKE 317
P + + G + E V ++ +++ P Y E + GL RI EA
Sbjct: 455 PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYG 514
Query: 318 LGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
L I N L+ GS ++ P A+ M+ G+ P T++ + C
Sbjct: 515 LTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYC 574
Query: 377 KRNKSDELVEVYKVLSAN--DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
K+ K++ ++ ++S + D+ SY ++ LC S + +++ M G+ P
Sbjct: 575 KQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPS 634
Query: 435 VSFYNSLMEACCREDLLR 452
++ ++ L+ +D++R
Sbjct: 635 IATWSVLINCFILDDIVR 652
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/480 (18%), Positives = 174/480 (36%), Gaps = 82/480 (17%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ F + +Y+ +LK+L + +++ +L ++ D+ Y +I S+ +
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCE---- 228
Query: 136 QKAFSVFNEVKFNCEDIGP--EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
+ E + E P + N+L+ L + A ++ EM +G+ + I +
Sbjct: 229 ---VGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYS 285
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRE----------------------------NSMING 225
I C + ++ S L ++ KR N MI G
Sbjct: 286 TLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345
Query: 226 -----SVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+V+A ++ GFC + +A V + C P+ Y + F GS+
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDG 405
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
+ K G P Y + L + EA+ L E++ NA I
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVP-TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
G + A F M ++ R P + T + L L K N+ +E + + +
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE--------- 448
+YN ++ C +G A ++ +M G PD N ++ A C++
Sbjct: 526 WSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM 585
Query: 449 -DLLRPAKKLW---------------------------DQMFASGCSGNLKTYNILISKF 480
DL+ ++ W ++M ++G ++ T+++LI+ F
Sbjct: 586 LDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/490 (22%), Positives = 217/490 (44%), Gaps = 36/490 (7%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
F + +++ +LK L + + S+L++++ N + D Y +I +GK +KA
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKAL 197
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+ NE+K + L+ G +D A+ EM G+E + + I F
Sbjct: 198 ELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGF 257
Query: 200 CENAKLGQVLSMLDEVRKRE--------NSMING-----------SVIAVLI-------- 232
C+ +L + ++ DEV +R N++I G + +I
Sbjct: 258 CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNV 317
Query: 233 ------IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
I G C + +EA + L+ + ++ +P+ + Y I+ + G V + +++
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVEL 377
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALI-GSVSS 343
+K P Y + GL + + EA +L +++ D DV+ NALI G
Sbjct: 378 MKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKE 437
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
A+ ++ ++EK T + L + K ++ +E++K +S + + ++Y
Sbjct: 438 NRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY 497
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
M+ C +G L A G++ +M+ L P V YN L+ + C+E L A +L+++M
Sbjct: 498 TAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQR 557
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
++ ++NI+I + G+I+ A L M G++PD TY+ L+ + L
Sbjct: 558 DNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDE 617
Query: 524 AFEVFNKSVN 533
A F+K V+
Sbjct: 618 AISFFDKMVD 627
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 174/389 (44%), Gaps = 52/389 (13%)
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M RG F+ + + C N + G+ +S+L E+R+ NS++ +I GFC+G
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRR--NSLMPDVFSYNTVIRGFCEG 190
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
K +E+A ++ +E++ C + + I+ + F G + E LK+ + +G+ Y
Sbjct: 191 KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVY 250
Query: 300 REFILGLIVERRICEAKEL--GEVIVSGKFTIDDD----VLNALIGSVSSIDP-RSAIVF 352
I G C+ EL G+ + D N LI + + A
Sbjct: 251 TSLIRGF------CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F FMIE+G P + T + L LC K+ E ++ ++ D + +YN++++ LC
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 413 SGRLREAYGVIQEMKRK--------------GL-----------------------DPDV 435
G + +A +++ MK++ GL DPDV
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDV 424
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YN+L+ C+E+ L A ++D + +G+ T NIL++ + G++ A+ L+
Sbjct: 425 ISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAA 524
+ + + ++ TYT++++G C+ L A
Sbjct: 485 ISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 101/199 (50%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
L G +++ A+ M +P + + + + + C+ + ++ +E+ + +
Sbjct: 149 LKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC 208
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ ++ +++ C +G++ EA G ++EMK GL+ D+ Y SL+ C L K
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKA 268
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L+D++ G S TYN LI F ++G+++ A +F M+E+GV P+ TYT L++GLC
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 517 QETNLQAAFEVFNKSVNHD 535
+ A + N + D
Sbjct: 329 GVGKTKEALQPLNLMIEKD 347
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/483 (21%), Positives = 195/483 (40%), Gaps = 75/483 (15%)
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLAS 166
LK++K + D VY +I + ++F+EV + N+L+
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
G + A ++F+ M RGV + + I C K + L L+ + +++ +
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEE--PNA 352
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE--REVVL 284
V +II+ CK V +A ++++ ++ R +PD I Y I+ G + E + + L
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS---- 340
K P Y I GL E R+ +A ++ +++V D N L+ S
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472
Query: 341 ------------------VSSIDPRSAIV-------FFNF---MIEKGRV----PTLSTL 368
V + D +A++ N ++ K RV P++
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ L +LCK D+ +++ + ++ F D+ S+N+M+ +G ++ A ++ M R
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 592
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
GL PD+ Y+ LI++F ++G ++
Sbjct: 593 AGLSPDLFTYSK-----------------------------------LINRFLKLGYLDE 617
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
A+ F M++ G PDA S+L+ + E+ K V+ D++L + + T M
Sbjct: 618 AISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMD 677
Query: 549 SLC 551
+C
Sbjct: 678 YMC 680
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 95/196 (48%)
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
N + V S + A F+ M+E +LS L + + K+ V ++
Sbjct: 77 NLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKR 136
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ ++ ++N+++ LC + +A +++EM+R L PDV YN+++ C L A
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+L ++M SGCS +L T+ ILI F + G+++ A+ M G+ D YTSL+ G
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 515 LCQETNLQAAFEVFNK 530
C L +F++
Sbjct: 257 FCDCGELDRGKALFDE 272
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%)
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+++G + + L K LC+ + + V + + + N D+ SYN ++ C
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
L +A + EMK G + + L++A C+ + A +M G +L Y
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
LI F + GE++ LF +LE+G +P A TY +L+ G C+ L+ A E+F
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Glycine max]
Length = 589
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 183/408 (44%), Gaps = 25/408 (6%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL-SMLDEVR 216
N +L L S G + A ++ D M+ + + + C N G + ++DE
Sbjct: 134 NEILQRLCSRGKLTVAARLIDVMARKS--------QIPHFPSCTNLIRGFIRKGLVDEAC 185
Query: 217 KRENSMI-NGSVIAV----LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
K N M+ +G V ++I G CK R+ A +++++ + C PD I Y +
Sbjct: 186 KTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCL 245
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI----VSGKF 327
G+ + + + + G P Y ++ L+ + C A EV+ + G +
Sbjct: 246 FDKGNFNQAVNFWRDQLRKGCPPYLITY-TVLIELVC--KYCGAARALEVLEDMAMEGCY 302
Query: 328 TIDDDVLNALIGSVSSIDP--RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
D N+L+ S +A+V N ++ G P T + L +L DE+
Sbjct: 303 P-DIVTYNSLVNLTSKQGKYEDTALVILN-LLSHGMQPNAVTYNTLIHSLINHGYWDEVD 360
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
++ K+++ +YN++++ LC SG L A M + PD+ YN+L+
Sbjct: 361 DILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGL 420
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+E + +L + + + CS L TYNI+I + +G +E A L+ M++KG+ PD
Sbjct: 421 CKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDE 480
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
T++SL G C+ L+ A E+ + + + + ++ LCR+
Sbjct: 481 ITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQ 528
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 144/373 (38%), Gaps = 38/373 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML-DEVR 216
N ++ L +G + +AL + ++MS G I + I + Q ++ D++R
Sbjct: 204 NMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDKGNFNQAVNFWRDQLR 263
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
K + + + ++ +C R A +VL+++ + C PD + Y + G
Sbjct: 264 KGCPPYLITYTVLIELVCKYCGAAR---ALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGK 320
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ +V+ G+ P Y I LI G + DD+L
Sbjct: 321 YEDTALVILNLLSHGMQPNAVTYNTLIHSLINH---------------GYWDEVDDILK- 364
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
M E PT T + L LCK D + Y + +
Sbjct: 365 ------------------IMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENC 406
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ +YN ++S LC G + E ++ + P + YN +++ R + AK+
Sbjct: 407 SPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKE 466
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L+D+M G + T++ L F ++E A L M K T Y ++ GLC
Sbjct: 467 LYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCVILGLC 526
Query: 517 QETNLQAAFEVFN 529
++ + A +V +
Sbjct: 527 RQKKVDIAIQVLD 539
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 101/278 (36%), Gaps = 70/278 (25%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A + M K ++P + +NL + ++ DE + + + D +YN+++
Sbjct: 149 AARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEACKTLNKMVMSGGVPDTITYNMVIG 208
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS---------------------------- 440
LC +GRLR A ++++M G PD YNS
Sbjct: 209 GLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDKGNFNQAVNFWRDQLRKGCPP 268
Query: 441 -------LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
L+E C+ A ++ + M GC ++ TYN L++ S+ G+ E +
Sbjct: 269 YLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVI 328
Query: 494 HNMLEKGVAPDATTYTSL-----------------------------------LEGLCQE 518
N+L G+ P+A TY +L L GLC+
Sbjct: 329 LNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKS 388
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
L A ++ V + +T + LC+ I
Sbjct: 389 GLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFI 426
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 127/318 (39%), Gaps = 49/318 (15%)
Query: 150 EDIGPEIC-------NSLLAVLASDG-YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
ED+ E C NSL+ + + G Y D AL + + +SH G++ + + + I
Sbjct: 294 EDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSH-GMQPNAVTYNTLIHSLIN 352
Query: 202 NAKLGQVLSMLDEVRK--RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ +V D++ K E S V ++++G CK ++ A + C P
Sbjct: 353 HGYWDEV----DDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSP 408
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D I Y + G + E +L +P Y I GL
Sbjct: 409 DIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGL------------- 455
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
A +GS+ SA ++ M++KG +P T S+L+ C+ +
Sbjct: 456 ----------------ARLGSM-----ESAKELYDEMVDKGIIPDEITHSSLTWGFCRAD 494
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ +E E+ K +S + +Y ++ LC ++ A V+ M + +PD Y+
Sbjct: 495 QLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCNPDERIYS 554
Query: 440 SLMEACCREDLLRPAKKL 457
+L++A +L+ A L
Sbjct: 555 ALIKAVADGGMLKEANDL 572
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 11/140 (7%)
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
ND T+ N ++ LC+ G+L A +I M RK P +L+ R+ L+
Sbjct: 128 NDEMTN----NEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDE 183
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A K ++M SG + TYN++I + G + AL L +M G +PDA TY S++
Sbjct: 184 ACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIR 243
Query: 514 GLCQETNLQAAFEVFNKSVN 533
L + N FN++VN
Sbjct: 244 CLFDKGN-------FNQAVN 256
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 172/402 (42%), Gaps = 40/402 (9%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN+LL L I ++ EM R + S + FG+ + C+ ++ + L + D +R
Sbjct: 284 CNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLR 343
Query: 217 KRENSMINGS----VIAVLIIHGFCKGKRVEEAFKVLDELRIREC-KPDFIAYRIVAEEF 271
+ S G V+ +I G CK + E+ +L+E+++ +P+ + Y + + F
Sbjct: 344 GKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGF 403
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
G+ + ++ + GV P + GL R+
Sbjct: 404 FKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRV------------------- 444
Query: 332 DVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
A+ FFN M KG +T + L C N + ++ ++ +
Sbjct: 445 ---------------HRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEM 489
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
++ D Y ++S LC +GR+ +A V+ ++K G D S YN L+ C++ L
Sbjct: 490 LSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKL 549
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
+L +M +G + TYN LIS + G+ A ++ M+++G+ P TY ++
Sbjct: 550 ERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAI 609
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI-SLCR 552
+ C + N+ ++F + + + +++ +I +LCR
Sbjct: 610 IHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCR 651
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 118/499 (23%), Positives = 208/499 (41%), Gaps = 76/499 (15%)
Query: 82 HSPLSYHSILK-SLSL-SRQINAIDSVLKQVKVNKIT-----LDSSVYRFIIPSLIQGKN 134
H P S S+ + SL L SR N+ +L + K T L ++ L +
Sbjct: 97 HHPHSLSSVFQGSLELASRHPNSQTHLLSLHRFRKSTHPTLPLTPKSASLLLQCLENARL 156
Query: 135 TQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+ +FN++ + + P++C+ LL VL G +AL + DEM FS G V
Sbjct: 157 VNDSLLLFNQLDPSSKS--PQLCHGLLRVLLKSGRAGDALHVLDEMPQANSGFSVTGEIV 214
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
F E+ + S +G V+ ++ G + + FK L +L
Sbjct: 215 F-----------------GELVRSGRSFPDGEVVGLVAKLG--ERGVFPDGFK-LTQLVG 254
Query: 255 REC--KPDFIAYRIVAEEFKLMGSV-----------FEREVVLKKKRKLGVAPRTNDYRE 301
+ C + + +A+ ++ +L G+V R +K+ +L R
Sbjct: 255 KLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRP 314
Query: 302 FIL--GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS--IDPRSAIVFFNFMI 357
++ G++V +C+A+ + E + V + L G S + +V FN +I
Sbjct: 315 SVVTFGILVNH-LCKARRIDEAL---------QVFDRLRGKGGSNWVGVEPDVVLFNTLI 364
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDE---LVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
+ LCK K ++ L+E K+ + N + +YN ++ +G
Sbjct: 365 D---------------GLCKVGKEEDGLSLLEEMKMGNINR--PNTVTYNCLIDGFFKAG 407
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
A+ + ++M +G+ P+V N+L++ C+ + A + +++M G GN TY
Sbjct: 408 NFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYT 467
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
LIS F V I A++ F ML G +PDA Y SL+ GLC + A V +K
Sbjct: 468 ALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLA 527
Query: 535 DVMLARSILSTFMISLCRR 553
L RS + + C++
Sbjct: 528 GFSLDRSCYNVLISGFCKK 546
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 162/373 (43%), Gaps = 5/373 (1%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKF-NCEDIGPEICNSLLAVLASDGYIDNALKM 176
D ++ +I L + + S+ E+K N N L+ G D A ++
Sbjct: 356 DVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHEL 415
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
F +M+ GV+ + I + C++ ++ + + +E++ + + + +I F
Sbjct: 416 FRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGK--GLKGNAATYTALISAF 473
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
C + A + +E+ C PD + Y + + G + + VV+ K + G +
Sbjct: 474 CGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDR 533
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNF 355
+ Y I G ++++ EL + D N LI + D +A
Sbjct: 534 SCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEK 593
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY-KVLSANDYFTDMESYNVMVSFLCTSG 414
MI++G P++ T + C + DE ++++ ++ S + + YN+++ LC +
Sbjct: 594 MIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNN 653
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ A ++++MK K + P+ + YN++++ + +L A +L D+M C + T
Sbjct: 654 DVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITME 713
Query: 475 ILISKFSEVGEIE 487
+L S VGEIE
Sbjct: 714 VLTEWLSAVGEIE 726
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 184/425 (43%), Gaps = 49/425 (11%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
++A +FDE+ RG S G + ++ V R + +
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER------EVVL 284
++I C R++ F L + + + D IA+ + L G ++ ++VL
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPL-----LKGLCADKRTSDAMDIVL 150
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN---ALIGSV 341
++ +LG P Y + GL E R EA EL +++ DV++ + G
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
D A ++ M+++G +P + T S++ LCK D+ +EV + N +
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN +V C+SG+ +EA G +++M G++PDV YNSLM+ C+ A+K++D M
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330
Query: 462 FASGCSGNLKTY-----------------------------------NILISKFSEVGEI 486
G + TY +ILI +++ G++
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
+ A+ +F M ++G+ PD TY +++ LC+ ++ A F + ++ + + ++
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450
Query: 547 MISLC 551
+ SLC
Sbjct: 451 IHSLC 455
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/530 (22%), Positives = 218/530 (41%), Gaps = 42/530 (7%)
Query: 66 LALGFFNWASQ-QPNFTHSPLSYHSILKSLSLS-RQINAIDSVLKQVKVNKITLDSSVYR 123
L LGF + + F +++ +LK L R +A+D VL+++ + Y
Sbjct: 107 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYN 166
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMS 181
++ L +Q+A + + + D P++ + +++ +G +D A + EM
Sbjct: 167 ILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML 226
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
RG+ + + + I C+ + + + +L + K N ++ I+HG+C +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVK--NGVMPNCRTYNSIVHGYCSSGQ 284
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+EA L ++ +PD + Y + + G E + K G+ P Y
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI----------------------- 338
+ G + + E L +++V + V + LI
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 339 --------GSVSSIDPRS-----AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
G+V I +S A+ +F MI++ P ++L +LC +K D+
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
E+ + D +N ++ C GR+ E+ + M R G+ PD+ Y++L++
Sbjct: 465 ELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 524
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C + A KL M + G + TYN LI+ + ++ +E AL LF M GV+PD
Sbjct: 525 CLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDI 584
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
TY +L+GL Q AA E++ L S + + LC+ L
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 196/448 (43%), Gaps = 9/448 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y SI+ +L ++ ++ VL + N + + Y I+ ++A
Sbjct: 235 VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK- 293
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
K + + + P++ NSL+ L +G A KMFD M+ RG++ +G + +
Sbjct: 294 -KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L ++ +LD + R N V ++LI + K +V++A V ++R + PD +
Sbjct: 353 GALVEMHGLLD-LMVRNGIHPNHYVFSILIC-AYAKQGKVDQAMLVFSKMRQQGLNPDTV 410
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y V G V + ++ ++P Y I L + + +AKEL +
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ +D N++I S + R + F+ M+ G P + T S L C K
Sbjct: 471 LDRGICLDTIFFNSIIDSHCK-EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
DE ++ + + D +YN +++ C R+ +A + +EM+ G+ PD+ YN
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+++ + AK+L+ + SG L TYNI++ + + ALR+F N+
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ + T+ ++ L + A ++F
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLF 677
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 178/424 (41%), Gaps = 13/424 (3%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVF-----NEVKFNCEDIGPEICNSLLAVLASDGYIDNALK 175
Y II +L + + KA V N V NC NS++ S G A+
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY-----NSIVHGYCSSGQPKEAIG 290
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+M GVE + + + C+N + + M D + KR + ++ G
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR--GLKPEITTYGTLLQG 348
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
+ + E +LD + P+ + I+ + G V + +V K R+ G+ P
Sbjct: 349 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFN 354
T Y I L R+ +A E ++ + + + V N+LI S+ D A
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL 468
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+++G +++ + CK + E +++ ++ D+ +Y+ ++ C +G
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 528
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
++ EA ++ M G+ PD YN+L+ C+ + A L+ +M +SG S ++ TYN
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
I++ + A L+ + E G + +TY +L GLC+ A +F
Sbjct: 589 IILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 648
Query: 535 DVML 538
D+ L
Sbjct: 649 DLQL 652
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 198/462 (42%), Gaps = 19/462 (4%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++L+ + + + +L + N I + V+ +I + + +A VF+
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFS-- 398
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
K + + P+ +++ +L G +++A++ F++M + I + I C
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458
Query: 204 KLGQ----VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
K + +L MLD + N II CK RV E+ K+ D + KP
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNS------IIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D I Y + + + L G + E +L +G+ P Y I G R+ +A L
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 320 EVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ S + D N ++ G + +A + + E G LST + + LCK
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
N +DE + +++ L D + ++N+M+ L GR EA + + GL PDV Y
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTY 692
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
+ + E + LL L+ M +GC+ N + N ++ K + G+I A + E
Sbjct: 693 SLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDE 752
Query: 499 KGVAPDATTYTSLLE----GLCQETNLQAAFEVFNKSVNHDV 536
K + +A+T + L+ G QE + +F+ VN +V
Sbjct: 753 KHFSLEASTASLFLDLLSGGKYQEYHSCIRGGIFSLCVNSEV 794
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 97/206 (47%), Gaps = 7/206 (3%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS---ANDYFTDMESYNVMVSF 409
F+ ++ +GR ++ L N + R+ V Y ++ A++ ++ +Y +++
Sbjct: 42 FDELLRRGRGASIYGL-NCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGS 100
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL-WDQMFASGCSG 468
C +GRL + + + +KG D + L++ C + A + +M GC
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIP 160
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKG--VAPDATTYTSLLEGLCQETNLQAAFE 526
N+ +YNIL+ + + AL L M + G PD +YT+++ G +E +L A+
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+++ ++ ++ S+ + +LC+
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCK 246
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/530 (21%), Positives = 219/530 (41%), Gaps = 42/530 (7%)
Query: 66 LALGFFNWASQ-QPNFTHSPLSYHSILKSLSLSRQI-NAIDSVLKQVKVNKITLDSSVYR 123
L LGF + + F +++ +LK L ++ +A+D VL+++ + Y
Sbjct: 107 LDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYN 166
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMS 181
++ L +Q+A + + + D P++ + +++ +G +D A + EM
Sbjct: 167 ILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML 226
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
RG+ + + + I C+ + + + +L + K N ++ I+HG+C +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVK--NGVMPNCRTYNSIVHGYCSSGQ 284
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+EA L ++ +PD + Y + + G E + K G+ P Y
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI----------------------- 338
+ G + + E L +++V + V + LI
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 339 --------GSVSSIDPRS-----AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
G+V I +S A+ +F MI++ P ++L +LC +K D+
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
E+ + D +N ++ C GR+ E+ + M R G+ PD+ Y++L++
Sbjct: 465 ELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 524
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C + A KL M + G + TYN LI+ + ++ +E AL LF M GV+PD
Sbjct: 525 CLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDI 584
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
TY +L+GL Q AA E++ L S + + LC+ L
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 183/425 (43%), Gaps = 49/425 (11%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
++A +FDE+ RG S G + ++ V R + +
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER------EVVL 284
+++ C R++ F L + + D IA+ + L G ++ ++VL
Sbjct: 96 ILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPM-----LKGLCADKRTSDAMDIVL 150
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN---ALIGSV 341
++ +LG P Y + GL + R EA EL +++ DV++ + G
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
D A ++ M+++G +P + T S++ LCK D+ +EV + N +
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN +V C+SG+ +EA G +++M G++PDV YNSLM+ C+ A+K++D M
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330
Query: 462 FASGCSGNLKTY-----------------------------------NILISKFSEVGEI 486
G + TY +ILI +++ G++
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
+ A+ +F M ++G+ PD TY +++ LC+ ++ A F + ++ + + ++
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450
Query: 547 MISLC 551
+ SLC
Sbjct: 451 IHSLC 455
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 191/435 (43%), Gaps = 9/435 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y SI+ +L ++ ++ VL + N + + Y I+ ++A
Sbjct: 235 VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK- 293
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
K + + + P++ NSL+ L +G A KMFD M+ RG++ +G + +
Sbjct: 294 -KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L ++ +LD + R N V ++LI + K +V++A V ++R + PD +
Sbjct: 353 GALVEMHGLLD-LMVRNGIHPNHYVFSILIC-AYAKQGKVDQAMLVFSKMRQQGLNPDTV 410
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y V G V + ++ ++P Y I L + + +AKEL +
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ +D N++I S + R + F+ M+ G P + T S L C K
Sbjct: 471 LDRGICLDTIFFNSIIDSHCK-EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
DE ++ + + D +YN +++ C R+ +A + +EM+ G+ PD+ YN
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+++ + AK+L+ + SG L TYNI++ + + ALR+F N+
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649
Query: 501 VAPDATTYTSLLEGL 515
+ + T+ ++ L
Sbjct: 650 LQLETRTFNIMIGAL 664
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 178/424 (41%), Gaps = 13/424 (3%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVF-----NEVKFNCEDIGPEICNSLLAVLASDGYIDNALK 175
Y II +L + + KA V N V NC NS++ S G A+
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY-----NSIVHGYCSSGQPKEAIG 290
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+M GVE + + + C+N + + M D + KR + ++ G
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR--GLKPEITTYGTLLQG 348
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
+ + E +LD + P+ + I+ + G V + +V K R+ G+ P
Sbjct: 349 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFN 354
T Y I L R+ +A E ++ + + + V N+LI S+ D A
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL 468
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+++G +++ + CK + E +++ ++ D+ +Y+ ++ C +G
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 528
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
++ EA ++ M G+ PD YN+L+ C+ + A L+ +M +SG S ++ TYN
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
I++ + A L+ + E G + +TY +L GLC+ A +F
Sbjct: 589 IILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 648
Query: 535 DVML 538
D+ L
Sbjct: 649 DLQL 652
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 189/435 (43%), Gaps = 15/435 (3%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++L+ + + + +L + N I + V+ +I + + +A VF+++
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ + + P+ +++ +L G +++A++ F++M + I + I C
Sbjct: 401 RQ--QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458
Query: 204 KLGQ----VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
K + +L MLD + N II CK RV E+ K+ D + KP
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNS------IIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D I Y + + + L G + E +L +G+ P Y I G R+ +A L
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 320 EVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ S + D N ++ G + +A + + E G LST + + LCK
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
N +DE + +++ L D + ++N+M+ L GR EA + + GL PDV Y
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTY 692
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
+ + E + LL L+ M +GC+ N + N ++ K + G+I A + E
Sbjct: 693 SLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDE 752
Query: 499 KGVAPDATTYTSLLE 513
K + +A+T + L+
Sbjct: 753 KHFSLEASTASLFLD 767
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 97/206 (47%), Gaps = 7/206 (3%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS---ANDYFTDMESYNVMVSF 409
F+ ++ +GR ++ L N + R+ V Y ++ A++ ++ +Y +++
Sbjct: 42 FDELLRRGRGASIYGL-NCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILMGS 100
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL-WDQMFASGCSG 468
C +GRL + + + +KG D + +++ C + A + +M GC
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIP 160
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKG--VAPDATTYTSLLEGLCQETNLQAAFE 526
N+ +YNIL+ + + AL L M + G PD +YT+++ G +E +L A+
Sbjct: 161 NVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+++ ++ ++ S+ + +LC+
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCK 246
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/453 (20%), Positives = 200/453 (44%), Gaps = 12/453 (2%)
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
+++ L R++ + ++ + + Y +I + +KA+ + +++ +
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346
Query: 149 CEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV 208
N ++ L +D +A+ +F EM+ G+ + + I C+ K+ +
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREA 405
Query: 209 LSMLDEVRKRENSMINGSVIAVLIIHG----FCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L++ +++ + G ++ H +C ++EA K+ E+ + P+ + Y
Sbjct: 406 LNLWEKMNE------TGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTY 459
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + + + +L + ++ GV+ Y I GL V R+CE E+ + +
Sbjct: 460 TTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFET 519
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
F N++I G + + SA + M KG P + T ++ CK + D
Sbjct: 520 EGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDL 579
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+++ + D+ +YN ++ C G + A V+ M + GL P++S YNS +
Sbjct: 580 ALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFIT 639
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
++ A + +++M G + TY LI FS+ G + AL+L+ M+ KG P
Sbjct: 640 GYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIP 699
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
D T+T+L GLC+ ++ A ++ ++ D+
Sbjct: 700 DHITFTALTHGLCRNGDIDDARKLLDEMNRLDI 732
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 117/498 (23%), Positives = 207/498 (41%), Gaps = 25/498 (5%)
Query: 25 RPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP 84
R RK + E+TL RD L P+ V + T + + Q + P
Sbjct: 296 REVRKALDIFEETL-----RDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLP 350
Query: 85 LS--YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
+ ++ ++K L + S+ K++ + I D+ Y +I L Q + ++A +++
Sbjct: 351 STNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLW 409
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
K N + P I +SLL +G +D A+K++ EM +G + + + +
Sbjct: 410 E--KMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHI 467
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
A + ++L E++ +N + +I+G C RV E ++L P
Sbjct: 468 NKAAFDKAYALLAEMK--QNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPT 525
Query: 261 FIAYRIVAEEF---KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-- 315
+ Y + F +MGS F V ++ G+ P Y FI G + C+
Sbjct: 526 AMTYNSIINGFIKAGMMGSAF---AVYQQMCAKGIPPNIVTYTSFIDGY-CKTSCCDLAL 581
Query: 316 KELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
K L +V G D N+LI G + A+ M++ G +P +S ++
Sbjct: 582 KMLNDVRCKG-LRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITG 640
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
+E + Y+ + D +Y ++ G + A + EM KG PD
Sbjct: 641 YKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPD 700
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+ +L CR + A+KL D+M N+ YN+LI+ + G+++ A RL
Sbjct: 701 HITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHD 760
Query: 495 NMLEKGVAPDATTYTSLL 512
MLE+ + PD TTY L+
Sbjct: 761 EMLERKIMPDDTTYDILV 778
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/475 (20%), Positives = 196/475 (41%), Gaps = 55/475 (11%)
Query: 117 LDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKM 176
LD+ ++ ++ + + A +F+E+ + + +C+ +A L + AL +
Sbjct: 175 LDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLV 234
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
+M G F + + ++ + L + DE+ M V+A ++HG+
Sbjct: 235 LRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKM--SVVLATTLMHGY 292
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
C + V +A + +E P + Y ++ G + + ++ R G+ P T
Sbjct: 293 CLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPST 352
Query: 297 NDYREFILGLIVERRICEA----KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVF 352
N++ I GL+ ++ +A KE+ + + FT + +L + I R A+
Sbjct: 353 NEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYN--ILIHWLCQRRKI--REALNL 408
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL--------------------- 391
+ M E G P + T +L C DE V++Y +
Sbjct: 409 WEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468
Query: 392 -------------------SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
S NDY +YN +++ LC GR+ E +++ + +G
Sbjct: 469 KAAFDKAYALLAEMKQNGVSCNDY-----TYNTLINGLCVVGRVCEVGEMLKRFETEGFV 523
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P YNS++ + ++ A ++ QM A G N+ TY I + + + AL++
Sbjct: 524 PTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKM 583
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
+++ KG+ PD Y SL+ G CQE N+ A +V + ++ S+ ++F+
Sbjct: 584 LNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFI 638
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 104/521 (19%), Positives = 202/521 (38%), Gaps = 80/521 (15%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PE--ICNSLL 161
+ ++ ++I D V I SL + ++ +A V ++ +D G P NS++
Sbjct: 199 LFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKM----QDAGFVPWDFTFNSVV 254
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
VL G ++ AL + DE+ G + S + + +C ++ + L + +E + +
Sbjct: 255 DVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLR--DG 312
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELR---------------------------- 253
++ V ++I G + E+A+++ ++R
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372
Query: 254 --IRECK----PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
+E PD Y I+ + E + +K + GV P Y +L
Sbjct: 373 SLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC 432
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
V + EA +L + FT + L+ G ++ A M + G
Sbjct: 433 VNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDY 492
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T + L LC + E+ E+ K + +YN +++ +G + A+ V Q+M
Sbjct: 493 TYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552
Query: 427 KRK-----------------------------------GLDPDVSFYNSLMEACCREDLL 451
K GL PD++ YNSL+ C+E +
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNM 612
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A ++ M G N+ YN I+ + + +E ALR + M+++G+ D TYT+L
Sbjct: 613 SHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTL 672
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++G ++ N+ A +++++ V + + LCR
Sbjct: 673 IDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCR 713
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 134/310 (43%), Gaps = 2/310 (0%)
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
++A ++ DE+ E +PD + + +VL+K + G P +
Sbjct: 194 DDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSV 253
Query: 303 ILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGR 361
+ L+ R+ EA + E++ +GK + G + R A+ F + G
Sbjct: 254 VDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGL 313
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
VPT T + L + + ++ E+ + + + +N+++ L ++A
Sbjct: 314 VPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVS 373
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+ +EM G+ PD YN L+ C+ +R A LW++M +G + TY+ L+ +
Sbjct: 374 LFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC 432
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
G ++ A++L+ M KG P+ TYT+L++G + A+ + + + V
Sbjct: 433 VNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDY 492
Query: 542 ILSTFMISLC 551
+T + LC
Sbjct: 493 TYNTLINGLC 502
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 134/354 (37%), Gaps = 56/354 (15%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWAS-----------QQPNFTHSPLSYHSILKSLS 95
L + + P ++T+ +L G N A+ +Q + + +Y++++ L
Sbjct: 443 LYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLC 502
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
+ ++ + +LK+ + + Y II I+ AF+V+ ++ + I P
Sbjct: 503 VVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM--CAKGIPPN 560
Query: 156 ICNSLLAVLASDGYI-----DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS 210
I + DGY D ALKM +++ +G+ + I+ FC+ + L
Sbjct: 561 IVTYTSFI---DGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQ 617
Query: 211 MLDEVRKRE--------NSMING-------------------------SVIAVLIIHGFC 237
+L + K NS I G + +I GF
Sbjct: 618 VLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFS 677
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K V A K+ E+ + PD I + + G + + +L + +L + P
Sbjct: 678 KDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVL 737
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG--SVSSIDPRSA 349
Y I G + ++ EA L + ++ K DD + L+G S+ S P A
Sbjct: 738 MYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVGMKSLGSDSPIDA 791
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 62/127 (48%)
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
EM+ KG D ++ +M AC +E + A +L+D+M AS + + ++ I+ ++
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILS 544
+ AL + M + G P T+ S+++ L + ++ A + ++ + ++ + +
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286
Query: 545 TFMISLC 551
T M C
Sbjct: 287 TLMHGYC 293
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 185/400 (46%), Gaps = 8/400 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N +LA L + A+ +F ++ G++ S + + + +C + + S+L ++ K
Sbjct: 14 NHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKILK 73
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
S+ +I G C + EA D + K D ++Y I+ MG
Sbjct: 74 MGYE--PNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMG-- 129
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNA 336
E ++ RK V Y I L + + +A L E+I G F + +
Sbjct: 130 -ETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFP-NVYTFSI 187
Query: 337 LIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
L+ ++ + A+ M++KG P + T + C N+ ++ + ++ V+
Sbjct: 188 LVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEG 247
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
++ YN++++ LC R+ EA + +EM K ++PDV YN L++ C+ + +
Sbjct: 248 VEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSL 307
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L D+M + G + ++ TYN L+ + ++ A+ L + ++G+ P+ TYT+L++GL
Sbjct: 308 ELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGL 367
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
C++ L+ A+ +F + + + + + LC++ L
Sbjct: 368 CKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGL 407
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 176/412 (42%), Gaps = 10/412 (2%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDE 179
+ I+ SL++ + A S+F +++FN I P I L+ G I + +
Sbjct: 13 FNHILASLVKINHYPTAISLFRQLEFN--GIKPSIVTLTILMNCYCHTGGITFLFSILTK 70
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
+ G E ++I F I C N + + L D V + V ++++G CK
Sbjct: 71 ILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKL--DQVSYAILMNGLCKM 128
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
A ++L R D + Y + + V + + + G+ P +
Sbjct: 129 GETRAAMQML---RKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTF 185
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIE 358
+ L +R+ +A L +++ + A++ ++ A+ FN M++
Sbjct: 186 SILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQ 245
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
+G P + + + LCK+ + DE + ++K + D+ +YN+++ LC G++
Sbjct: 246 EGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKIST 305
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
+ ++ EM+ G D+ YNSL+ A C+ L A L ++ G N+ TY LI
Sbjct: 306 SLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLID 365
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ G +E A +F +L +G TY ++ GLC++ A + ++
Sbjct: 366 GLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSR 417
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/463 (19%), Positives = 192/463 (41%), Gaps = 47/463 (10%)
Query: 45 DSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQINA 102
+ + PS+V I H F+ ++ + P +++ +++K + L+ Q A
Sbjct: 39 NGIKPSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQ--A 96
Query: 103 IDSVL--KQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSL 160
+++L V + LD Y ++ L + T+ A + + N + + + +++
Sbjct: 97 YEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLRKTWVNADVV---MYSTI 153
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
+ L ++ +A +++ EM +G+ + F +
Sbjct: 154 IDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSI-------------------------- 187
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
++ CK ++ ++A +L + + KP+ + Y + + + L+ V +
Sbjct: 188 -----------LVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKA 236
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+ + GV P Y I GL ++R+ EA L + + K D N LI
Sbjct: 237 LNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDG 296
Query: 341 VSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ + S ++ + M G+ + T ++L LCK + D+ + + K + +
Sbjct: 297 LCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPN 356
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ +Y ++ LC GRL +AY + QE+ +G V YN ++ C++ L A L
Sbjct: 357 VCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLS 416
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+M + C + +Y +I SE GE +L M+ +G++
Sbjct: 417 RMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLS 459
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 162/394 (41%), Gaps = 43/394 (10%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
F +SY ++ L + A +L++ VN D +Y II SL +GK A+
Sbjct: 111 FKLDQVSYAILMNGLCKMGETRAAMQMLRKTWVNA---DVVMYSTIIDSLCKGKFVTDAY 167
Query: 140 SVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
+++E+ + I P + + L+ L D A+ + M +GV+ + + +G +
Sbjct: 168 RLYSEMI--AKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMD 225
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
+C ++ + L++ + V +E N + II+G CK KRV+EA + E+ ++
Sbjct: 226 GYCLVNQVNKALNIFN-VMVQEGVEPNVWCYNI-IINGLCKKKRVDEAMNLFKEMHWKKI 283
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
PD + Y I+ + +G + ++ + R +G Y + L C+
Sbjct: 284 NPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHAL------CKNHH 337
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
L + AI + ++G P + T + L LCK
Sbjct: 338 LDQ----------------------------AITLVKEIKDQGIQPNVCTYTTLIDGLCK 369
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ ++ +++ + Y + +YNVM++ LC G EA ++ M+ PD
Sbjct: 370 DGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVS 429
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
Y +++ A + KL M G S LK
Sbjct: 430 YETIIYALSEKGETVKTNKLLCAMIVRGLSKRLK 463
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 55/120 (45%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P + +N ++ + + + A L+ Q+ +G ++ T IL++ + G I +
Sbjct: 8 PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+L+ G P++ T+T+L++G+C A + V H L + + M LC+
Sbjct: 68 LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 184/425 (43%), Gaps = 49/425 (11%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
++A +FDE+ RG S G + ++ V R + +
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER------EVVL 284
++I C R++ F L + + + D IA+ + L G ++ ++VL
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPL-----LKGLCADKRTSDAMDIVL 150
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN---ALIGSV 341
++ +LG P Y + GL E R EA EL +++ DV++ + G
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
D A ++ M+++G +P + T S++ LCK D+ +EV + N +
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN +V C+SG+ +EA G +++M G++PDV YNSLM+ C+ A+K++D M
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330
Query: 462 FASGCSGNLKTY-----------------------------------NILISKFSEVGEI 486
G + TY +ILI +++ G++
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
+ A+ +F M ++G+ PD TY +++ LC+ ++ A F + ++ + + ++
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450
Query: 547 MISLC 551
+ SLC
Sbjct: 451 IHSLC 455
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 167/389 (42%), Gaps = 15/389 (3%)
Query: 138 AFSVFNEV-KFNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
A S +N + + +++ P +C L+ G +D + +G I F
Sbjct: 72 AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV----LIIHGFCKGKRVEEAFKVLD 250
+ C + + + D V +R + G + V +++ G C R +EA ++L
Sbjct: 132 LLKGLCADKRTSDAM---DIVLRRMTQL--GCIPNVFSYNILLKGLCDENRSQEALELLQ 186
Query: 251 EL--RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
+ +C PD ++Y V F G + + + G+ P Y I L
Sbjct: 187 MMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCK 246
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
+ + +A E+ +V + N+++ G SS P+ AI F M G P + T
Sbjct: 247 AQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
++L LCK + E +++ ++ ++ +Y ++ T G L E +G++ M
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
R G+ P+ ++ L+ A ++ + A ++ +M G + + TY +I + G +E
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLC 516
A+R F M+++ ++P Y SL+ LC
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/405 (20%), Positives = 154/405 (38%), Gaps = 44/405 (10%)
Query: 66 LALGFFNWASQ-QPNFTHSPLSYHSILKSLSLS-RQINAIDSVLKQVKVNKITLDSSVYR 123
L LGF + + F +++ +LK L R +A+D VL+++ + Y
Sbjct: 107 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYN 166
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMS 181
++ L +Q+A + + + D P++ + +++ +G +D A + EM
Sbjct: 167 ILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML 226
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
RG+ + + + I C+ + + + +L + K N ++ I+HG+C +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVK--NGVMPNCRTYNSIVHGYCSSGQ 284
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+EA L ++ +PD + Y + + G E + K G+ P Y
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGR 361
+ G + + E L + M+ G
Sbjct: 345 LLQGYATKGALVEMHGL----------------------------------LDLMVRNGI 370
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P S L K+ K D+ + V+ + D +Y ++ LC SGR+ +A
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK----KLWDQMF 462
++M + L P YNSL+ + C D AK K W + F
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKDYFLKCWIEAF 475
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 97/206 (47%), Gaps = 7/206 (3%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS---ANDYFTDMESYNVMVSF 409
F+ ++ +GR ++ L N + R+ V Y ++ A++ ++ +Y +++
Sbjct: 42 FDELLRRGRGASIYGL-NCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGS 100
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL-WDQMFASGCSG 468
C +GRL + + + +KG D + L++ C + A + +M GC
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIP 160
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKG--VAPDATTYTSLLEGLCQETNLQAAFE 526
N+ +YNIL+ + + AL L M + G PD +YT+++ G +E +L A+
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+++ ++ ++ S+ + +LC+
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCK 246
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/446 (22%), Positives = 202/446 (45%), Gaps = 18/446 (4%)
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK-FN 148
+LK S+ ++ + SV+ + ++ + + ++ S + +A V + ++ F
Sbjct: 181 LLKDKSMVNEVEEVYSVMIKCQIRPTIV---TFNTMMDSRCKEGEVGRAVEVLDVMRMFG 237
Query: 149 CEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV 208
C D N L+ L+ G D A ++ ++MS G++ S + I FC+
Sbjct: 238 C-DPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKK------ 290
Query: 209 LSMLDEVRKRENSMIN-GSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
M +E M+ G++ V+ I++ C+ RV +A + LD + + PD ++
Sbjct: 291 -EMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVS 349
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + +G+ E ++ + R + P Y I G + AK + + ++
Sbjct: 350 YNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMI 409
Query: 324 SGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
D L+ G + A F+ M+ +G P + K
Sbjct: 410 KHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPS 469
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
+ + + + A + D+ +YNV+++ LC G +A ++Q+M+ +G+ PD Y S++
Sbjct: 470 KAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSII 529
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
A LLR A++++ M G ++ TY +LI ++ G ++ A + F M +KGV+
Sbjct: 530 HAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVS 589
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVF 528
P+ TY +L+ GLC+E + A+ +F
Sbjct: 590 PNVITYNALIYGLCKENMMDVAYNLF 615
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 123/551 (22%), Positives = 219/551 (39%), Gaps = 114/551 (20%)
Query: 48 SPSLVARVINPYLLTHHSL-ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSV 106
P + RV+N + H L AL FF W +QPNF S ++ +IL L+ + + V
Sbjct: 50 QPEFLLRVLNS--VKHRPLTALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWV 107
Query: 107 LK---QVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAV 163
++ +VKV+ LD ++ + G+N++ + ++ + L+ V
Sbjct: 108 MEKAIEVKVDGGVLD------VLVGIGCGRNSE---------------VSVKLLDLLIQV 146
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA-KLGQVLSMLDEVRKRENSM 222
A ++ L +F +M + G+ + C KL + SM++EV + + M
Sbjct: 147 FAKKLILEKCLMVFYKMVNNGLLPDV--------RNCNRVLKLLKDKSMVNEVEEVYSVM 198
Query: 223 INGSVIAVLI-----IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
I + ++ + CK V A +VLD +R+ C P+ ++Y ++ G
Sbjct: 199 IKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEF 258
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ ++++ LG+ + Y I G + EA +L
Sbjct: 259 DRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRRE---------------- 302
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
M+ +G +PT+ T + + +LC+ + + V+ D
Sbjct: 303 ------------------MLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLM 344
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D+ SYN ++ G EA + E++ K L P V YN+L++ CR L AK +
Sbjct: 345 PDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGM 404
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS------- 510
D M G ++ T+ IL+ F ++G + A LF ML +G+ PD YT+
Sbjct: 405 KDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELK 464
Query: 511 ----------------------------LLEGLCQETNLQAAFEVFNK----SVNHDVML 538
L+ GLC+ N A E+ K + D +
Sbjct: 465 LGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVT 524
Query: 539 ARSILSTFMIS 549
SI+ +IS
Sbjct: 525 YTSIIHAHLIS 535
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 1/169 (0%)
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
L+ YK+++ N D+ + N ++ L + E V M + + P + +N++M+
Sbjct: 157 LMVFYKMVN-NGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMD 215
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+ C+E + A ++ D M GC N +YN+L++ S GE + A L M G+
Sbjct: 216 SRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKV 275
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A TY L+ G C++ + A ++ + + + +T M SLCR
Sbjct: 276 SAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCR 324
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 123/539 (22%), Positives = 222/539 (41%), Gaps = 46/539 (8%)
Query: 35 EQTLHQLGLRDSLSPSLVARVINPYLLTHHS---------------LALGFFNWASQQPN 79
+QT H +R SPS+ V NP LTH +AL FFNWA P
Sbjct: 81 QQTPH---VRLLQSPSINLSV-NPDSLTHEQAITVVASLASEAGSMVALSFFNWAIGFPK 136
Query: 80 FTHSPLSY----HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
F + Y S + + + R +D +++ + + + +F
Sbjct: 137 FRYFMRFYIVCATSFIGNENFERAHEVMDCMVR--------VFAEIGKF----------- 177
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
Q+A ++ E++ + + N + V G + A +FDEM RGV ++ + +
Sbjct: 178 QEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKLM 237
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
+C ++ L ++ +R + + L+I FC+ F D+
Sbjct: 238 AIAYCRMGRISDTDRWLKDMVRR--GFVVDNATCTLMISTFCEKGFASRVFWYFDKWVEL 295
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
KP+ I + + GS+ + +L++ K G P + I GL + +A
Sbjct: 296 GLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKA 355
Query: 316 KELG-EVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSK 373
L +++ S + + ++I D A + + M E+G VP T + L
Sbjct: 356 FRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLID 415
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
K ++ E+ ++ + ++ +YN + LC GR EA ++++ R GL
Sbjct: 416 GHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQA 475
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
D Y L+ CR R A + +MF +G ++ TYN LI+ FS +E + +LF
Sbjct: 476 DTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLF 535
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ G+ P TYTS++ G C++ N+ A + FN+ +H + LC+
Sbjct: 536 AEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCK 594
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 164/379 (43%), Gaps = 10/379 (2%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
C +++ G+ FD+ G++ + I F I C+ + Q ML+E+
Sbjct: 269 CTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMV 328
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RIRECKPDFIAYRIVAEEFKLMG 275
K+ +I G CK E+AF++ +L R + KP+ Y + +
Sbjct: 329 KK--GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKED 386
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ E++L + ++ G+ P T Y I G +A EL +++ F+ + N
Sbjct: 387 KLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYN 446
Query: 336 ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLS----TLSNLSKNLCKRNKSDELVEVYKVL 391
A I S+ + + +++KG L T + L LC+R + E + + +
Sbjct: 447 AFIDSLCK---KGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKM 503
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
DM +YN +++ R+ E+ + E GL P Y S++ CR+ +
Sbjct: 504 FKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNV 563
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A K +++M GC+ + TY LIS + +++ A +L+ M++KG++P T +L
Sbjct: 564 SLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTL 623
Query: 512 LEGLCQETNLQAAFEVFNK 530
C++ + A + +
Sbjct: 624 AYEYCKQDDSATAMVILER 642
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 65/153 (42%)
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
E + MV G+ +EA ++ EM+ GL V N + L+ A+ ++D+
Sbjct: 162 EVMDCMVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDE 221
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M G + +Y ++ + +G I R +M+ +G D T T ++ C++
Sbjct: 222 MRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGF 281
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
F F+K V + ++ + LC+R
Sbjct: 282 ASRVFWYFDKWVELGLKPNLINFTSLINGLCKR 314
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 170/400 (42%), Gaps = 10/400 (2%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L+ V +G ++ + M G V + CE + V R
Sbjct: 186 ALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFR--RML 243
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
E V I G CK + V++AF VL+E+ R KP+ + + + +G
Sbjct: 244 ETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWT- 302
Query: 279 ER--EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
ER + LK + P + Y I G E ++ A+ L +V + +
Sbjct: 303 ERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTT 362
Query: 337 LIGS---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
LIG S D A N M ++G +P + T + + CK+ K E +V ++ ++
Sbjct: 363 LIGGHCKGGSFD--RAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATS 420
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
D +Y ++++ C G + A + M G PD+ Y SL+ C++ +
Sbjct: 421 QGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEE 480
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
++K +D+ G +TY +I+ + +VG ALR+F M++ G D+ TY +L+
Sbjct: 481 SQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALIS 540
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
GLC+E+ L+ A ++ ++ ++ T CRR
Sbjct: 541 GLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRR 580
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 168/404 (41%), Gaps = 8/404 (1%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM- 180
Y I L + + ++AF V E+ +L+ L G+ + A ++F ++
Sbjct: 254 YTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLI 313
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
+ + + V I +C KL + +L VR E + + +I G CKG
Sbjct: 314 KSSSYKPNVHTYTVMIGGYCREGKLARAEMLL--VRMVEQGLKPNTNTYTTLIGGHCKGG 371
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+ AF+++++++ P+ Y V + F G + E VL+ G+ Y
Sbjct: 372 SFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYT 431
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEK 359
I + I A +L + +V D + +LI + + FF+ +
Sbjct: 432 ILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMI 491
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G +PT T +++ CK +S + V++ + N F D +Y ++S LC RL EA
Sbjct: 492 GLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEA 551
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ + M K L P +L CR + A + D++ + T ++++ K
Sbjct: 552 KALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQ---QVHTVDVVVRK 608
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
S +G+++ A +L++ A D TYT + C E N A
Sbjct: 609 LSALGDVDAASLFLKKVLDEDYAVDHATYTGFINS-CYENNRYA 651
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 149/376 (39%), Gaps = 4/376 (1%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
C ++ L G + + F M G + + + +I C+ + Q +L+E+
Sbjct: 219 CTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMV 278
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKV-LDELRIRECKPDFIAYRIVAEEFKLMG 275
R + +I G CK E AF++ L ++ KP+ Y ++ + G
Sbjct: 279 GR--GLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREG 336
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ E++L + + G+ P TN Y I G A EL + F + N
Sbjct: 337 KLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYN 396
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
A+I G + A +G T + L CK+ ++++ + N
Sbjct: 397 AVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVEN 456
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D+E+Y ++S C ++ E+ + GL P Y S++ C+ A
Sbjct: 457 GCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLA 516
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+++++M +GC + TY LIS + +E A L+ ML+K + P T +L
Sbjct: 517 LRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFE 576
Query: 515 LCQETNLQAAFEVFNK 530
C+ A V ++
Sbjct: 577 YCRREKTSIAVSVLDR 592
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 86/214 (40%), Gaps = 36/214 (16%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F+ M G P + L C+ K +E+ + + + D + V+V LC
Sbjct: 169 FDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCE 228
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
GR ++ + M G P+V Y + ++ C+ ++ A + ++M G N+ T
Sbjct: 229 KGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYT 288
Query: 473 YNILISKFSEVGEIEGALRLF-------------HN-----------------------M 496
+ LI ++G E A RLF H M
Sbjct: 289 HTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRM 348
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+E+G+ P+ TYT+L+ G C+ + AFE+ NK
Sbjct: 349 VEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNK 382
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%)
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+E+ N ++ +G A V M R G+ PD + +L+ CCRE + L
Sbjct: 146 VETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLA 205
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
M+ G S + T +++ E G + F MLE G P+ YT+ ++GLC+
Sbjct: 206 AMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRR 265
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++ AF V + V + +T + LC+
Sbjct: 266 YVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCK 298
>gi|356513957|ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Glycine max]
Length = 626
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/556 (21%), Positives = 230/556 (41%), Gaps = 70/556 (12%)
Query: 42 GLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSR--- 98
G+ + P ++R++ + HS L FFNW N T + +Y I+ L+ SR
Sbjct: 79 GILPHMGPHEISRIL-LRCQSDHSSVLTFFNWVKNDLNITPTLHNYCVIVHILAWSRVFS 137
Query: 99 -QINAIDSVLKQVKVNKITL-------------------DSSVYRFIIPSLIQGKNTQKA 138
+N + +++ V+V + + + +++ +I + ++ +K
Sbjct: 138 HAMNLLSELIQLVEVEGVCVPPNDGIYENLVECTEDCNWNPAIFDMLIKAYVKAGMVEKG 197
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ F C CN LL+ L+ YI +++EM G+ + F +
Sbjct: 198 LATFRRNIEACFIPNVIACNCLLSGLSRFNYIGQCWAVYEEMGRLGIHRNAYTFNIMTHV 257
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
C++ +V LD++ E V +++ +CK +R+E+AF + + IR
Sbjct: 258 LCKDGDTDKVTRFLDKME--EEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYIRGVM 315
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR------- 311
P+ I + ++ G V E + + G+ P Y + G E +
Sbjct: 316 PNLITHTVLMNGLCEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKMQMCRSL 375
Query: 312 --------ICEAKELGEVIVSG--------------------KFTIDDDVLNALIGSVS- 342
IC +IV G + I +D+ + LI ++
Sbjct: 376 LHEMIGNGICPDSVTCRLIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYLIVALCI 435
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
P +A F + + G +P ++T + L ++LCK N +E + + + ++ +
Sbjct: 436 EGRPFAARSFLLRISQDGYMPKINTYNKLVESLCKFNNVEEALILKSEMVKRSMILNLVA 495
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y ++S LC R EA G+++EM G+ PDV +L+ C E+ + A L + F
Sbjct: 496 YRAVISCLCRVNRTLEAEGLLEEMVSSGILPDVEISRALINGYCEENKVDKAVSLL-KFF 554
Query: 463 ASGCS-GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
A+ + ++YN ++ F +VG + L L +L+ G + T ++ G L
Sbjct: 555 ANEFQVYDTESYNAVVKVFCDVGNVAELLELQDKLLKVGYVSNRLTCKYVIHG------L 608
Query: 522 QAAFEVFNKSVNHDVM 537
Q A E ++ + HD++
Sbjct: 609 QKAMEQDDEMLGHDML 624
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 108/236 (45%), Gaps = 35/236 (14%)
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F + M E+G P L T + L + CK+ + ++ +YK++ ++ ++ V+++ LC
Sbjct: 270 FLDKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHTVLMNGLC 329
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
G+++EA+ + +M +G+DPDV YN+L+ CRE ++ + L +M +G +
Sbjct: 330 EEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGNGICPDSV 389
Query: 472 TYNILISKFSEVGEIEGALR---------------LFHNML------------------- 497
T +++ F+ G++ AL L+ ++
Sbjct: 390 TCRLIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYLIVALCIEGRPFAARSFLLRI 449
Query: 498 -EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ G P TY L+E LC+ N++ A + ++ V ++L + LCR
Sbjct: 450 SQDGYMPKINTYNKLVESLCKFNNVEEALILKSEMVKRSMILNLVAYRAVISCLCR 505
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 91/185 (49%)
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T + ++ LCK +D++ + + D+ +YN +V+ C RL +A+ + + M
Sbjct: 250 TFNIMTHVLCKDGDTDKVTRFLDKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIM 309
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
+G+ P++ + LM C E ++ A +L+ QM G ++ +YN L+S + G++
Sbjct: 310 YIRGVMPNLITHTVLMNGLCEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKM 369
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
+ L H M+ G+ PD+ T ++EG ++ L +A + + + +
Sbjct: 370 QMCRSLLHEMIGNGICPDSVTCRLIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYL 429
Query: 547 MISLC 551
+++LC
Sbjct: 430 IVALC 434
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P+V N L+ R + + ++++M G N T+NI+ + G+ + R
Sbjct: 211 PNVIACNCLLSGLSRFNYIGQCWAVYEEMGRLGIHRNAYTFNIMTHVLCKDGDTDKVTRF 270
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
M E+G PD TY +L+ C++ L+ AF ++ VM + M LC
Sbjct: 271 LDKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHTVLMNGLC 329
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 195/454 (42%), Gaps = 43/454 (9%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALK 175
D+ + + L + + ++A ++F++++ C D P++ N+L+A G D AL
Sbjct: 88 DTVAFTAAMHWLCEVRRVEQAMTLFDDMRETC-DCAPDVVAYNTLIAGYCKAGDGDRALD 146
Query: 176 MFDEMSHRG-VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV-IAVLII 233
MF + G + + + F + C+ ++ L++ E+ + + V + +I
Sbjct: 147 MFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEML---GAGLKADVNVCNTLI 203
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
H C+ + +A ++L + C D Y I+ G + E ++ R G A
Sbjct: 204 HCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCA 263
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFF 353
+Y I G I R+ EA +L E ++ + D N LI S A+ F
Sbjct: 264 LSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLIALCKSKQLEEALTLF 323
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
+ G V + T S L K ++ + +EV+ + D YNV++S L
Sbjct: 324 QEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQ 383
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYN---SLMEACCRED--------------------- 449
G++ EA ++++M RKG+ PD YN ++ +C R +
Sbjct: 384 GKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTY 443
Query: 450 --LLRPAKK---------LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
LL KK L+D+M A+ C +L T+ LI ++ G +E AL +++
Sbjct: 444 NTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVK 503
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
G AP++ Y +L+ G C+ + +E+F +
Sbjct: 504 MGHAPNSYIYNALISGFCRSGQVDKGYELFQDMI 537
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/462 (22%), Positives = 179/462 (38%), Gaps = 41/462 (8%)
Query: 107 LKQ---VKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAV 163
LKQ K N ++ D+ ++ L + A +VF E+ +CN+L+
Sbjct: 151 LKQEGSCKPNAVSFDT-----LVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHC 205
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR----- 218
G + A ++ M+ +G+ + C ++ +V S ++ R
Sbjct: 206 TCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALS 265
Query: 219 ------------------------ENSMINGSVIAVL---IIHGFCKGKRVEEAFKVLDE 251
E++M SV V ++ CK K++EEA + E
Sbjct: 266 AVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLIALCKSKQLEEALTLFQE 325
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
D Y + + F G + V +K G P T Y I L + +
Sbjct: 326 AEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGK 385
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSN 370
+ EA EL E + D N +I +SS A FF M + P + T +
Sbjct: 386 VDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNT 445
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L L K ++DE +++ + AN D+ ++ ++ L +GR+ +A + + G
Sbjct: 446 LLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMG 505
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
P+ YN+L+ CR + +L+ M C + TY IL+ FS G A+
Sbjct: 506 HAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAM 565
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
L M+ +G P TY L+ L ++ A+ +F + +
Sbjct: 566 ELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMI 607
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 143/350 (40%), Gaps = 5/350 (1%)
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
+GV S + I F L + MLD++R R N +V +H C+ +R
Sbjct: 46 QKGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMR-RGNFCQPDTVAFTAAMHWLCEVRR 104
Query: 242 VEEAFKVLDELR-IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG-VAPRTNDY 299
VE+A + D++R +C PD +AY + + G + ++ ++ G P +
Sbjct: 105 VEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSF 164
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIE 358
++ L R +A + + ++ D +V N LI + R A + M
Sbjct: 165 DTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTA 224
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
T L C+ + E+ ++ + +YN ++ GRL E
Sbjct: 225 HACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAE 284
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A + + K PDV YN L+ A C+ L A L+ + G ++ TY+ L+
Sbjct: 285 ATQLFESTMTKESVPDVFTYN-LLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMD 343
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
F + G AL +F+NM + G PD Y L+ L ++ + A E+
Sbjct: 344 AFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELL 393
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 11/210 (5%)
Query: 349 AIVFFNFMIEKGR-VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT-DMESYNVM 406
A+ F+ M E P + + L CK D +++++ L + S++ +
Sbjct: 108 AMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTL 167
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
V FLC R +A V QEM GL DV+ N+L+ CR +LR A++L M A C
Sbjct: 168 VIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAC 227
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ + TY IL++ G++ G A A Y +++G + L A +
Sbjct: 228 ARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQ 287
Query: 527 VFNKSVNHDVMLARSILSTF----MISLCR 552
+F + M S+ F +I+LC+
Sbjct: 288 LFEST-----MTKESVPDVFTYNLLIALCK 312
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 38/206 (18%)
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGR----------------------------- 415
+ YK L D + MV +C GR
Sbjct: 3 LATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQA 62
Query: 416 ------LREAYGVIQEMKRKGL-DPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS-GCS 467
L A G++ +M+R PD + + M C + A L+D M + C+
Sbjct: 63 FGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCA 122
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKG-VAPDATTYTSLLEGLCQETNLQAAFE 526
++ YN LI+ + + G+ + AL +F + ++G P+A ++ +L+ LC+ + A
Sbjct: 123 PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALA 182
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
VF + + + ++ +T + CR
Sbjct: 183 VFQEMLGAGLKADVNVCNTLIHCTCR 208
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 167/384 (43%), Gaps = 53/384 (13%)
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M RG + S + + V + C+++ G+ +++LDE+R + V +II+G C+
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAK--GCTPNIVTYNVIINGMCRE 235
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
RV++A ++L+ L +PD ++Y V
Sbjct: 236 GRVDDAKEILNRLSSYGFQPDIVSYTTV-------------------------------- 263
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI------GSVSSIDPRSAIVFF 353
+ GL RR + K L +V K ++ + L+ G V AI
Sbjct: 264 ---LKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMV-----ERAIQVL 315
Query: 354 NFMIEKGRVPTLSTLSNLSKN-LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
M + G P +TL N+ N +CK+ + D+ + + D SY ++ LC
Sbjct: 316 QQMSQHGCTPN-TTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCR 374
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
+GR A ++ EM RK P+ +N+ + C++ L+ A KL + M GCS + T
Sbjct: 375 AGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVT 434
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YN L+ F G ++ AL LF+N+ P+ TYT+LL GLC L AA E+ + +
Sbjct: 435 YNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMI 491
Query: 533 NHDVMLARSILSTFMISLCRRVLI 556
D L + + C++ +
Sbjct: 492 QKDCPLNAVTFNVLVSFFCQKGFV 515
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 190/436 (43%), Gaps = 10/436 (2%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFD 178
Y ++ ++ + +A +V +E++ + P I N ++ + +G +D+A ++ +
Sbjct: 189 TYTVLLEAVCKSSGFGEAMNVLDEMRA--KGCTPNIVTYNVIINGMCREGRVDDAKEILN 246
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
+S G + + + + C + V + E+ ++ + V +++ FC+
Sbjct: 247 RLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKK--CVPNEVTFDMLVRFFCR 304
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
G VE A +VL ++ C P+ IV G V + L G P T
Sbjct: 305 GGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTIS 364
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMI 357
Y + GL R AKEL +V ++ N I + AI M
Sbjct: 365 YTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMP 424
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
E G + T + L C + + D +E++ L + +Y +++ LC + RL
Sbjct: 425 EYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEP---NTITYTTLLTGLCHAERLD 481
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
A ++ EM +K + +N L+ C++ + A +L +QM GC+ NL T+N L+
Sbjct: 482 AAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLL 541
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
++ E AL L H ++ KGV+ D TY+S+++ L +E + A ++ + + +
Sbjct: 542 DGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMR 601
Query: 538 LARSILSTFMISLCRR 553
+ + + +LC+R
Sbjct: 602 PKVGMYNKILFALCKR 617
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/458 (21%), Positives = 199/458 (43%), Gaps = 10/458 (2%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S ++Y +L+++ S +VL +++ T + Y II + + A +
Sbjct: 186 SVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEIL 245
Query: 143 NEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
N + + P+I + ++L L + D+ +F EM + + + F + + FC
Sbjct: 246 N--RLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFC 303
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + + +L ++ ++ + + ++I+ CK RV++A+ L+ + + C PD
Sbjct: 304 RGGMVERAIQVLQQMS--QHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 361
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
I+Y V G + +L + + P + FI L + I +A +L E
Sbjct: 362 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIE 421
Query: 321 VIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
++ ++ NAL+ G SA+ FN + + P T + L LC
Sbjct: 422 LMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAE 478
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ D E+ + D + ++NV+VSF C G + EA ++ +M G P++ +N
Sbjct: 479 RLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFN 538
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+L++ ++ A +L + + G S + TY+ ++ S E A+++ H + +
Sbjct: 539 TLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDM 598
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
G+ P Y +L LC+ A + F V++ M
Sbjct: 599 GMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCM 636
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 176/429 (41%), Gaps = 16/429 (3%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QP+ +SY ++LK L +R+ + + + ++ K + + ++ +G +
Sbjct: 254 QPDI----VSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVE 309
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+A V ++ + +CN ++ + G +D+A + M G TI + +
Sbjct: 310 RAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVL 369
Query: 197 WKFCENAKLGQVLSMLDE-VRKR--ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
C + +L E VRK N + + I +L C+ +E+A K+++ +
Sbjct: 370 RGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICIL-----CQKGLIEQAIKLIELMP 424
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
C + Y + F + G V + L+ L P T Y + GL R+
Sbjct: 425 EYGCSVGIVTYNALVHGFCVQGRV---DSALELFNNLPCEPNTITYTTLLTGLCHAERLD 481
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLS 372
A EL ++ ++ N L+ A+ N M+E G P L T + L
Sbjct: 482 AAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLL 541
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
+ K S+E +E+ L + D +Y+ +V L R EA ++ ++ G+
Sbjct: 542 DGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMR 601
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P V YN ++ A C+ A + M ++GC N TY ILI + G ++ A +
Sbjct: 602 PKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYV 661
Query: 493 FHNMLEKGV 501
+ KGV
Sbjct: 662 LSELYAKGV 670
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/533 (22%), Positives = 224/533 (42%), Gaps = 85/533 (15%)
Query: 70 FFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSL 129
F+W +Q + HS +Y+ L +L+ + +Q++ D Y ++ L
Sbjct: 24 LFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGL 83
Query: 130 IQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGY-----IDNALKMFDEMSHRG 184
+ KA + +++ + G ++ N + + DG +D+AL++F MS G
Sbjct: 84 CKAGELDKAKELLGQLR----ESGVKL-NVITYSVVIDGCCKASRVDDALEIFKTMSSGG 138
Query: 185 -VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR--ENSMINGSVIAVLIIHGFCKGKR 241
+ F + C ++ + + + + K E ++I+ S + + G CK R
Sbjct: 139 GCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTL----LDGLCKAGR 194
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE-----REVVLKKKRKLGVAPRT 296
++EA ++ +E+ + C PD +AY V E R++V K + VA T
Sbjct: 195 LDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFST 254
Query: 297 NDYREFILGLIVER------------RIC------EAKELGEVIVSGKFTIDDDVLNALI 338
++G++ ++ +C EA + E ++S ++ N LI
Sbjct: 255 ------VIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLI 308
Query: 339 GSV--SSIDPRSAIVF--FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+V S P ++F M E P L T + + NLCK + DE E+ ++
Sbjct: 309 HAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANY 368
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL----------------------- 431
D+ +Y+ +V LC G+L A +++EM ++G+
Sbjct: 369 GLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYA 428
Query: 432 ------------DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
PD+ YN+L++ C+ + A +M A+ C+ ++ +Y I+I+
Sbjct: 429 LSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITA 488
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
G+ GA +F M+++GV PD Y SLL+GL + A E+ S+
Sbjct: 489 LCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL 541
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 103/517 (19%), Positives = 201/517 (38%), Gaps = 66/517 (12%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
Q+ + +Y +L+ L + +++ +L Q++ + + L+ Y +I +
Sbjct: 65 QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRV 124
Query: 136 QKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
A +F + + P++ NSLL L S + A +F+ M+ G E + I +
Sbjct: 125 DDALEIFKTMSSGGGCV-PDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYS 183
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRE--------NSMING-------------------- 225
+ C+ +L + + +E+ ++ S + G
Sbjct: 184 TLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTK 243
Query: 226 ----------SVIAVL------------IIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+VI +L +I C+ ++EA K +E+ R P
Sbjct: 244 GSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAEL 303
Query: 264 Y----RIVAEEFKLMGSV--FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
+ V + +L V F+R +K ++ P Y + L +++ EA+E
Sbjct: 304 FNTLIHAVCKSKRLPDGVLLFQR---MKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQE 360
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
L + + + D +AL+ + + A M ++G P T +++ L
Sbjct: 361 LVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALS 420
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K K D + + + A D+ +YN ++ LC +GR+ EA + +M PDV
Sbjct: 421 KAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVF 480
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
Y ++ A CR A ++ +M G + Y+ L+ + G + AL L
Sbjct: 481 SYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTS 540
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
L K PD + +L+GLC+ + A EV + +
Sbjct: 541 LCK---PDFVMHKMVLDGLCKAGKAEDACEVVERMAD 574
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 45/246 (18%), Positives = 101/246 (41%), Gaps = 7/246 (2%)
Query: 75 SQQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQG 132
++ N+ SP ++Y +++ L +++ +L+++ + DS I+ +L +
Sbjct: 363 NEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKA 422
Query: 133 KNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
A S +K N+LL L G ID A+ +M +
Sbjct: 423 GKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSY 482
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
+ I C + + ++ E+ KR ++ +V+ ++ G + + A ++L
Sbjct: 483 TIIITALCRSGQAAGAHAIFQEMVKR--GVLPDTVLYHSLLDGLARNGLEDLALELL--- 537
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
+ CKPDF+ +++V + G + V+++ G Y + GL ++
Sbjct: 538 KTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKV 597
Query: 313 CEAKEL 318
+A++L
Sbjct: 598 DKARQL 603
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 180/397 (45%), Gaps = 7/397 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ +A + + + ++M G+ + +FI FC ++L L++L ++ K
Sbjct: 87 NKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK 146
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E ++ S + ++G+C KR+ +A ++D++ KPD + + L
Sbjct: 147 LGYEPDIVTLSSL----LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E ++ + + G P Y + GL I A L + + + + + N
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262
Query: 336 ALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I S+ A+ F M KG P + T ++L LC + + + +
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK 322
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ ++N ++ G+L EA + +EM ++ +DPD YN L+ C + L A
Sbjct: 323 KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA 382
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K+++ M + C N++TYN LI+ F + +E + LF M ++G+ + TYT++++G
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
Q + +A VF + V++ V S + LC
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 196/452 (43%), Gaps = 50/452 (11%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QP+ ++Y +++ L I+ ++L +++ +I + ++ II SL + ++ +
Sbjct: 220 QPDL----VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 137 KAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
A +F E++ + I P + NSL+ L + G +A ++ M + + + + F
Sbjct: 276 VAVDLFTEME--TKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
I F + KL + + +E+ +R S+ ++ L+I+GFC R++EA ++ +
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQR--SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS 391
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
++C P+ Y + F V + + ++ + G+ T Y I G
Sbjct: 392 KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF------- 444
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT-LSTLSNLSK 373
+ D SA + F M+ RVPT + T S L
Sbjct: 445 ---------------------------QAGDCDSAQMVFKQMVSN-RVPTDIMTYSILLH 476
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
LC K D + ++K L ++ ++ YN M+ +C +G++ EA+ + + K P
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---P 533
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
DV YN+++ C + LL+ A L+ +M G N TYN LI + + L
Sbjct: 534 DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELI 593
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
M G DA+T SL+ + + L +F
Sbjct: 594 KEMRSSGFVGDAST-ISLVTNMLHDGRLDKSF 624
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 203/448 (45%), Gaps = 14/448 (3%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++ S+L S++I+ +++ Q+ D+ + +I L +A ++ ++
Sbjct: 154 VTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQ 213
Query: 145 -VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
V+ C+ P++ +++ L G ID AL + ++M ++ + + F I C
Sbjct: 214 MVQRGCQ---PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC- 269
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
K V +D + E I +V+ +I+ C R +A ++L + ++ P+
Sbjct: 270 --KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN 327
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ + + + F G + E E + ++ + + P T Y I G + R+ EAK++ +
Sbjct: 328 VVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387
Query: 321 VIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+VS + N LI G + F M ++G V T + + + +
Sbjct: 388 FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
D V+K + +N TD+ +Y++++ LC+ G+L A + + +++ ++ ++ YN
Sbjct: 448 DCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYN 507
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+++E C+ + A WD + ++ TYN +IS ++ A LF M E
Sbjct: 508 TMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKED 564
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEV 527
G P++ TY +L+ ++ + A+ E+
Sbjct: 565 GTLPNSGTYNTLIRANLRDCDRAASAEL 592
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 174/386 (45%), Gaps = 43/386 (11%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-L 231
A+ + D+M RG + + +G + C+ + L++L+ K E + I +V+
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLN---KMEAARIKANVVIFNT 263
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
II CK + VE A + E+ + +P+ + Y + G + +L +
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
+ P + I E ++ EA++L E ++ SIDP + +
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ-----------------RSIDPDT--I 364
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
+N +I C N+ DE +++K + + D ++++YN +++ C
Sbjct: 365 TYNLLI---------------NGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
R+ + + +EM ++GL + Y ++++ + A+ ++ QM ++ ++
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF-NK 530
TY+IL+ G+++ AL +F + + + + Y +++EG+C+ + A+++F +
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529
Query: 531 SVNHDVMLARSILSTFMISLCRRVLI 556
S+ DV+ +++S LC + L+
Sbjct: 530 SIKPDVVTYNTMIS----GLCSKRLL 551
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 1/271 (0%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
VL K KLG P + G +RI +A L + +V + D LI +
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 343 SIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ S A+ + M+++G P L T + LCKR D + + + A ++
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVV 259
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+N ++ LC + A + EM+ KG+ P+V YNSL+ C A +L M
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ N+ T+N LI F + G++ A +L M+++ + PD TY L+ G C L
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A ++F V+ D + +T + C+
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F M++ P++ + L + K NK + ++ + + + D+ +Y++ ++
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C +L A V+ +M + G +PD+ +SL+ C + A L DQM G
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ T+ LI + A+ L M+++G PD TY +++ GLC+ ++ A +
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
NK + I +T + SLC+
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCK 270
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 84/215 (39%), Gaps = 21/215 (9%)
Query: 360 GRVPTLSTLSNLSKNLCKRNK------------SDELVEVYKVLSANDYFTDME------ 401
G PT+ + NL + C + L ++ KV A D F DM
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFP 81
Query: 402 ---SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+N ++S + + + ++M+ G+ D+ Y+ + CR L A +
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M G ++ T + L++ + I A+ L M+E G PD T+T+L+ GL
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
A + ++ V T + LC+R
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 158/378 (41%), Gaps = 9/378 (2%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN ++ + A +M G E + F + FC ++ L++ D++
Sbjct: 120 CNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIV 179
Query: 217 K---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
R N V +IH CK + + A ++ +++ +P+ + Y +
Sbjct: 180 GMGFRPNV-----VTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCE 234
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
+G + +L+ K G+ P + I + +I EAKEL +V++ D
Sbjct: 235 IGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFT 294
Query: 334 LNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
ALI + + A F M G P T + L CK + ++ +++ +S
Sbjct: 295 YTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMS 354
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ +Y V++ C GR A V +M + PD+ YN L++ C +
Sbjct: 355 QKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVE 414
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A ++ M N+ TY I+I +VG++E A LF ++ KG+ P+ TYT+++
Sbjct: 415 KALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMI 474
Query: 513 EGLCQETNLQAAFEVFNK 530
G C+ + A +F K
Sbjct: 475 SGFCRRGFIHEADALFKK 492
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 160/349 (45%), Gaps = 3/349 (0%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
SLL I++AL +FD++ G + + + I C+N L + + +++
Sbjct: 157 SLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMG-- 214
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+N + V ++ G C+ R +A +L ++ R +P+ I + + + F +G +
Sbjct: 215 DNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIM 274
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
E + + K ++ V P Y I GL R+ EA+++ ++ S + ++ LI
Sbjct: 275 EAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLI 334
Query: 339 -GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
G S F M +KG V T + L + C + D EV+ + +
Sbjct: 335 HGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAP 394
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D+ +YNV++ LC +G + +A + + M+++ +D ++ Y +++ C+ + A L
Sbjct: 395 PDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDL 454
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ +F+ G N+ TY +IS F G I A LF M E G P+ +
Sbjct: 455 FCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNES 503
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 152/371 (40%), Gaps = 40/371 (10%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR- 218
LL+V+A D + +F++M G+ + + C +++ + L ++ K
Sbjct: 88 LLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLG 147
Query: 219 -ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E ++ + + +HGFC R+E+A + D++ +P+ + Y + +
Sbjct: 148 FEPDLVTFTSL----LHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHL 203
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ + G+ P Y + GL CE
Sbjct: 204 NHAVEIFNQMGDNGIRPNVVTYNSLVSGL------CE----------------------- 234
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
IG S A M+++G P + T + L K K E E+YKV+ +
Sbjct: 235 IGRWSD-----AAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVY 289
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D+ +Y +++ LCT GRL EA + M+ G P+ Y +L+ C+ + K+
Sbjct: 290 PDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKI 349
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ +M G N TY +LI + VG + A +F+ M + PD TY LL+GLC
Sbjct: 350 FYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCY 409
Query: 518 ETNLQAAFEVF 528
++ A +F
Sbjct: 410 NGYVEKALMIF 420
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 106/201 (52%), Gaps = 1/201 (0%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F+ ++ G P + T + L LCK + VE++ + N ++ +YN +VS
Sbjct: 171 ALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVS 230
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC GR +A ++++M ++G+ P+V + +L++A + + AK+L+ M
Sbjct: 231 GLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYP 290
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TY LI+ G ++ A ++F+ M G P+ TYT+L+ G C+ ++ ++F
Sbjct: 291 DVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIF 350
Query: 529 NKSVNHDVMLARSILSTFMIS 549
+ ++ ++A +I T +I
Sbjct: 351 YE-MSQKGLVANTITYTVLIQ 370
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 164/387 (42%), Gaps = 41/387 (10%)
Query: 58 PYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITL 117
P L+T SL GF +W + I +L+L QI + + N +T
Sbjct: 150 PDLVTFTSLLHGFCHW--------------NRIEDALALFDQIVGMG-----FRPNVVT- 189
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALK 175
Y +I L + ++ A +FN++ N I P + NSL++ L G +A
Sbjct: 190 ----YTTLIHCLCKNRHLNHAVEIFNQMGDN--GIRPNVVTYNSLVSGLCEIGRWSDAAW 243
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA-----V 230
+ +M RG++ + I F I F K+G+++ E ++ MI SV
Sbjct: 244 LLRDMMKRGIQPNVITFTALIDAF---VKVGKIM----EAKELYKVMIQMSVYPDVFTYT 296
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I+G C R++EA ++ + P+ + Y + F V + + + +
Sbjct: 297 ALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQK 356
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G+ T Y I G + R A+E+ + S + D N L+ G + A
Sbjct: 357 GLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKA 416
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
++ F +M ++ + T + + + +CK K ++ +++ L + ++ +Y M+S
Sbjct: 417 LMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISG 476
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVS 436
C G + EA + ++MK G P+ S
Sbjct: 477 FCRRGFIHEADALFKKMKEDGFLPNES 503
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%)
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++S + R + ++M+ G+ P + N +M CR A +M G
Sbjct: 88 LLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLG 147
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+L T+ L+ F IE AL LF ++ G P+ TYT+L+ LC+ +L A
Sbjct: 148 FEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAV 207
Query: 526 EVFNK 530
E+FN+
Sbjct: 208 EIFNQ 212
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 177/399 (44%), Gaps = 7/399 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N ++A + G +A+++FDEM+ R V + I + I + L + D++
Sbjct: 19 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVC 78
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ ++ +++ G C+ R+ E +LDE+ ++ PD Y I+ + G
Sbjct: 79 H--GLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 136
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFIL--GLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ K K GV DY IL GL + ++ A+E+ + +V+ + N
Sbjct: 137 KAMLSLFGKYLKNGVT--IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYN 194
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
LI G + + A F M + P T + L LCK + ++ + N
Sbjct: 195 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 254
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+E++N ++ +G+L + + V+ EM+ GL P+V Y S++ A C+ + A
Sbjct: 255 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 314
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+ D MF N + YN +I + E G + A L M G++P TY L++G
Sbjct: 315 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 374
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
LC ++ + A E+ N NH ++ +T + + C R
Sbjct: 375 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYR 413
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/461 (20%), Positives = 194/461 (42%), Gaps = 14/461 (3%)
Query: 51 LVARVINPYLLTHHSLALGFFNWASQQPNF-----------THSPLSYHSILKSLSLSRQ 99
+ R + P +T++++ G + F + ++Y+ +L L + +
Sbjct: 41 MTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGR 100
Query: 100 INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS 159
+ ++L ++ K+ D Y + L + +++ S+F + N IG C+
Sbjct: 101 MGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSI 160
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL L DG + A ++ + + G+ + + + I +C+ +L S +++ R
Sbjct: 161 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 220
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+ + +I+G CK +R+ A +L E++ P + + + + G + +
Sbjct: 221 --IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 278
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+VL + ++ G+ P Y + +I EA + + + + V NA+I
Sbjct: 279 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 338
Query: 340 SVSSIDPR-SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
+ P A + M G P++ T + L K LC +++ E E+ LS +
Sbjct: 339 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 398
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D SYN ++S C G + +A + Q M + G+ V Y+ L+ L + L+
Sbjct: 399 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLY 458
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+M + + +NI++ +S+ G A L ML+K
Sbjct: 459 QKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 499
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/425 (20%), Positives = 170/425 (40%), Gaps = 7/425 (1%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFD 178
Y +I I+G + + F + +++ C + P N LL+ L G + + D
Sbjct: 52 TYNTMIDGHIKGGDLEAGFRLRDQMV--CHGLKPNAITYNVLLSGLCRAGRMGETSALLD 109
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
EM+ + + + + N +LS+ + K N + G ++++G CK
Sbjct: 110 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLK--NGVTIGDYTCSILLNGLCK 167
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+V A +VL L P + Y + + G + + + + P
Sbjct: 168 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHIT 227
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMI 357
Y I GL RI A++L + + N LI + + + M
Sbjct: 228 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 287
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
E G P + + ++ CK K E V + + D + + YN ++ G
Sbjct: 288 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPND 347
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+A+ ++++MK G+ P + YN L++ C + + A+++ + + + +YN LI
Sbjct: 348 QAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 407
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
S G I+ AL L M + G+ TY L+ GL L ++ K + ++V+
Sbjct: 408 SACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVV 467
Query: 538 LARSI 542
+ +I
Sbjct: 468 PSNAI 472
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
SYNV+++ + +GR +A V EM + + P+ YN++++ + L +L DQM
Sbjct: 17 SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 76
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G N TYN+L+S G + L M + + PD TY+ L +GL + +
Sbjct: 77 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 136
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+A +F K + + V + S + LC+
Sbjct: 137 KAMLSLFGKYLKNGVTIGDYTCSILLNGLCK 167
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 422 VIQEMKRKGLDPDVSF-YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+++ M R G P +F YN ++ R A +++D+M N TYN +I
Sbjct: 1 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ G++E RL M+ G+ P+A TY LL GLC+
Sbjct: 61 IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCR 97
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%)
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N +YN++I+ G A+ +F M E+ V P+ TY ++++G + +L+A F +
Sbjct: 14 NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 73
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
++ V H + + + LCR
Sbjct: 74 DQMVCHGLKPNAITYNVLLSGLCR 97
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 184/425 (43%), Gaps = 49/425 (11%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
++A +FDE+ RG S G + ++ V R + +
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER------EVVL 284
++I C R++ F L + + + D IA+ + L G ++ ++VL
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPL-----LKGLCADKRTSDAMDIVL 150
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN---ALIGSV 341
++ +LG P Y + GL E R EA EL +++ DV++ + G
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
D A ++ M+++G +P + T S++ LCK D+ +EV + N +
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN +V C+SG+ +EA G +++M G++PDV YNSLM+ C+ A+K++D M
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330
Query: 462 FASGCSGNLKTY-----------------------------------NILISKFSEVGEI 486
G + TY +ILI +++ G++
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
+ A+ +F M ++G+ PD TY +++ LC+ ++ A F + ++ + + ++
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450
Query: 547 MISLC 551
+ SLC
Sbjct: 451 IHSLC 455
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 117/530 (22%), Positives = 218/530 (41%), Gaps = 42/530 (7%)
Query: 66 LALGFFNWASQ-QPNFTHSPLSYHSILKSLSLS-RQINAIDSVLKQVKVNKITLDSSVYR 123
L LGF + + F +++ +LK L R +A+D VL+++ + Y
Sbjct: 107 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYN 166
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMS 181
++ L +Q+A + + + D P++ + +++ +G +D A + EM
Sbjct: 167 ILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML 226
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
RG+ + + + I C+ + + + +L + K N ++ I+HG+C +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVK--NGVMPNCRTYNSIVHGYCSSGQ 284
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+EA L ++ +PD + Y + + G E + K G+ P Y
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI----------------------- 338
+ G + + E L +++V + V + LI
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 339 --------GSVSSIDPRS-----AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
G+V I +S A+ +F MI++ P ++L +LC +K D+
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
E+ + D +N ++ C GR+ E+ + M R G+ PD+ Y++L++
Sbjct: 465 ELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 524
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C + A KL M + G + TYN LI+ + ++ +E AL LF M GV+PD
Sbjct: 525 CLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDI 584
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
TY +L+GL Q AA E++ L S + + LC+ L
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 196/448 (43%), Gaps = 9/448 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y SI+ +L ++ ++ VL + N + + Y I+ ++A
Sbjct: 235 VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK- 293
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
K + + + P++ NSL+ L +G A KMFD M+ RG++ +G + +
Sbjct: 294 -KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L ++ +LD + R N V ++LI + K +V++A V ++R + PD +
Sbjct: 353 GALVEMHGLLD-LMVRNGIHPNHYVFSILIC-AYAKQGKVDQAMLVFSKMRQQGLNPDTV 410
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y V G V + ++ ++P Y I L + + +AKEL +
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ +D N++I S + R + F+ M+ G P + T S L C K
Sbjct: 471 LDRGICLDTIFFNSIIDSHCK-EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
DE ++ + + D +YN +++ C R+ +A + +EM+ G+ PD+ YN
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+++ + AK+L+ + SG L TYNI++ + + ALR+F N+
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ + T+ ++ L + A ++F
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLF 677
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 178/424 (41%), Gaps = 13/424 (3%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVF-----NEVKFNCEDIGPEICNSLLAVLASDGYIDNALK 175
Y II +L + + KA V N V NC NS++ S G A+
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY-----NSIVHGYCSSGQPKEAIG 290
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+M GVE + + + C+N + + M D + KR + ++ G
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR--GLKPEITTYGTLLQG 348
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
+ + E +LD + P+ + I+ + G V + +V K R+ G+ P
Sbjct: 349 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFN 354
T Y I L R+ +A E ++ + + + V N+LI S+ D A
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL 468
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+++G +++ + CK + E +++ ++ D+ +Y+ ++ C +G
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 528
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
++ EA ++ M G+ PD YN+L+ C+ + A L+ +M +SG S ++ TYN
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
I++ + A L+ + E G + +TY +L GLC+ A +F
Sbjct: 589 IILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 648
Query: 535 DVML 538
D+ L
Sbjct: 649 DLQL 652
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 200/462 (43%), Gaps = 19/462 (4%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++L+ + + + +L + N I + V+ +I + + +A VF+++
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ + + P+ +++ +L G +++A++ F++M + I + I C
Sbjct: 401 RQ--QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458
Query: 204 KLGQ----VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
K + +L MLD + N II CK RV E+ K+ D + KP
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNS------IIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D I Y + + + L G + E +L +G+ P Y I G R+ +A L
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 320 EVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ S + D N ++ G + +A + + E G LST + + LCK
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
N +DE + +++ L D + ++N+M+ L GR EA + + GL PDV Y
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTY 692
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
+ + E + LL L+ M +GC+ N + N ++ K + G+I A + E
Sbjct: 693 SLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDE 752
Query: 499 KGVAPDATTYTSLLE----GLCQETNLQAAFEVFNKSVNHDV 536
K + +A+T + L+ G QE + +F+ VN +V
Sbjct: 753 KHFSLEASTASLFLDLLSGGKYQEYHSCIRGGIFSLCVNSEV 794
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 97/206 (47%), Gaps = 7/206 (3%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS---ANDYFTDMESYNVMVSF 409
F+ ++ +GR ++ L N + R+ V Y ++ A++ ++ +Y +++
Sbjct: 42 FDELLRRGRGASIYGL-NCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGS 100
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL-WDQMFASGCSG 468
C +GRL + + + +KG D + L++ C + A + +M GC
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIP 160
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKG--VAPDATTYTSLLEGLCQETNLQAAFE 526
N+ +YNIL+ + + AL L M + G PD +YT+++ G +E +L A+
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+++ ++ ++ S+ + +LC+
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCK 246
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 178/399 (44%), Gaps = 7/399 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N ++A + G +A+++FDEM+ R V + I + I + L + D++
Sbjct: 67 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVC 126
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + ++ +++ G C+ R+ E +LDE+ ++ PD Y I+ + G
Sbjct: 127 --HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 184
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFIL--GLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ K K GV DY IL GL + ++ A+E+ + +V+ + N
Sbjct: 185 KAMLSLFGKYLKNGVT--IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYN 242
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
LI G + + A F M + P T + L LCK + ++ + N
Sbjct: 243 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 302
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+E++N ++ +G+L + + V+ EM+ GL P+V Y S++ A C+ + A
Sbjct: 303 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 362
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+ D MF N + YN +I + E G + A L M G++P TY L++G
Sbjct: 363 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 422
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
LC ++ + A E+ N NH ++ +T + + C R
Sbjct: 423 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYR 461
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/461 (20%), Positives = 194/461 (42%), Gaps = 14/461 (3%)
Query: 51 LVARVINPYLLTHHSLALGFFNWASQQPNF-----------THSPLSYHSILKSLSLSRQ 99
+ R + P +T++++ G + F + ++Y+ +L L + +
Sbjct: 89 MTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGR 148
Query: 100 INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS 159
+ ++L ++ K+ D Y + L + +++ S+F + N IG C+
Sbjct: 149 MGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSI 208
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL L DG + A ++ + + G+ + + + I +C+ +L S +++ R
Sbjct: 209 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 268
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+ + +I+G CK +R+ A +L E++ P + + + + G + +
Sbjct: 269 --IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 326
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+VL + ++ G+ P Y + +I EA + + + + V NA+I
Sbjct: 327 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 386
Query: 340 SVSSIDPR-SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
+ P A + M G P++ T + L K LC +++ E E+ LS +
Sbjct: 387 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 446
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D SYN ++S C G + +A + Q M + G+ V Y+ L+ L + L+
Sbjct: 447 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLY 506
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+M + + +NI++ +S+ G A L ML+K
Sbjct: 507 QKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 547
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/425 (20%), Positives = 170/425 (40%), Gaps = 7/425 (1%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFD 178
Y +I I+G + + F + +++ C + P N LL+ L G + + D
Sbjct: 100 TYNTMIDGHIKGGDLEAGFRLRDQMV--CHGLKPNAITYNVLLSGLCRAGRMGETSALLD 157
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
EM+ + + + + N +LS+ + K N + G ++++G CK
Sbjct: 158 EMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLK--NGVTIGDYTCSILLNGLCK 215
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+V A +VL L P + Y + + G + + + + P
Sbjct: 216 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHIT 275
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMI 357
Y I GL RI A++L + + N LI + + + M
Sbjct: 276 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 335
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
E G P + + ++ CK K E V + + D + + YN ++ G
Sbjct: 336 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPND 395
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+A+ ++++MK G+ P + YN L++ C + + A+++ + + + +YN LI
Sbjct: 396 QAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 455
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
S G I+ AL L M + G+ TY L+ GL L ++ K + ++V+
Sbjct: 456 SACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVV 515
Query: 538 LARSI 542
+ +I
Sbjct: 516 PSNAI 520
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
SYNV+++ + +GR +A V EM + + P+ YN++++ + L +L DQM
Sbjct: 65 SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 124
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G N TYN+L+S G + L M + + PD TY+ L +GL + +
Sbjct: 125 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 184
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+A +F K + + V + S + LC+
Sbjct: 185 KAMLSLFGKYLKNGVTIGDYTCSILLNGLCK 215
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF-YNSLMEAC 445
+ +L++ D ++N V +G L EA G+++ M R G P +F YN ++
Sbjct: 14 AFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGM 73
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
R A +++D+M N TYN +I + G++E RL M+ G+ P+A
Sbjct: 74 WRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNA 133
Query: 506 TTYTSLLEGLCQ 517
TY LL GLC+
Sbjct: 134 ITYNVLLSGLCR 145
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG-NLKTYN 474
+R A+G++ G PD +N ++AC L A + +M G N +YN
Sbjct: 11 VRRAFGILAS---AGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYN 67
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
++I+ G A+ +F M E+ V P+ TY ++++G + +L+A F + ++ V H
Sbjct: 68 VVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCH 127
Query: 535 DVMLARSILSTFMISLCR 552
+ + + LCR
Sbjct: 128 GLKPNAITYNVLLSGLCR 145
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 196/436 (44%), Gaps = 9/436 (2%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSH 182
+I +L +G + A +F +K I P + N ++ L +G +DNA ++ ++M+
Sbjct: 226 VINALCKGGKMENAIELF--MKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTV 283
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-IIHGFCKGKR 241
+GV+ + +G I + +V +LDE+ + N +V+ +I G+CK
Sbjct: 284 KGVQPNLKTYGALINGLIKLNFFDKVNHILDEMI---GAGFNPNVVVFNNLIDGYCKMGN 340
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+E A K+ D + + P + + + F + E L++ G++ ++
Sbjct: 341 IEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYS 400
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKG 360
+ L + R A ++++S F D +L L+ G A + ++EKG
Sbjct: 401 VVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG 460
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
+ T + L LC K E + K + D +YN ++ C G++ +
Sbjct: 461 SPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCF 520
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+ +EM ++G+ PD+ YN L+ C L A KLWD+ ASG N+ TY I++ +
Sbjct: 521 RLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGY 580
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
+ IE LF+ +L K + ++ Y +++ CQ N+ AA ++ + ++
Sbjct: 581 CKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNC 640
Query: 541 SILSTFMISLCRRVLI 556
+ S+ + +C L+
Sbjct: 641 ATYSSLIHGVCNIGLV 656
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/456 (20%), Positives = 191/456 (41%), Gaps = 44/456 (9%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N T + ++ +S+++ S QI ++ L+++ + +++ ++ L + A
Sbjct: 355 NITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSA 414
Query: 139 FSVFNEV---KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
F + F D+ + L+ L DG A +++ + +G S +
Sbjct: 415 FRFTKMMLSRNFRPSDL---LLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNAL 471
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
I C KL + ++ E+ +R M + A+++ GFC +VE F++ +E+ R
Sbjct: 472 IHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALIL--GFCNEGKVEGCFRLREEMTKR 529
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
+PD Y + +G + + + + + G+ + Y + G RI +
Sbjct: 530 GIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 589
Query: 316 KELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+ L ++S K ++ V N +I + + +A+ M KG +P +T
Sbjct: 590 ENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCAT------- 642
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
Y+ ++ +C G + +A +I EM+++G P+
Sbjct: 643 ----------------------------YSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPN 674
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V Y +L+ C+ + A+ W +M + N TY ++I + ++G +E A L
Sbjct: 675 VVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLI 734
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
M E G+ PD TY L G C+ ++ AF+V ++
Sbjct: 735 KMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQ 770
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/470 (19%), Positives = 205/470 (43%), Gaps = 5/470 (1%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+ I+ L + +++ + +++ V + + Y +I LI+ K + +E
Sbjct: 256 VTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDE 315
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + + N+L+ G I+ ALK+ D M + + +++ + FC++ +
Sbjct: 316 MIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQ 375
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP-DFIA 263
+ + L+E+ S+ + +V +H CK R AF+ + R +P D +
Sbjct: 376 IEHAENALEEILSSGLSIHPDNCYSV--VHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLL 433
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+V K + E+ + K A + I GL ++ EA + + ++
Sbjct: 434 TMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTS-NALIHGLCGAGKLPEASRIVKEML 492
Query: 324 SGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+D NALI G + M ++G P + T + L + LC K D
Sbjct: 493 ERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLD 552
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
+ ++++ A+ +++ +Y +M+ C + R+ + + E+ K ++ + YN ++
Sbjct: 553 DAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIII 612
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+A C+ + A +L + M + G N TY+ LI +G +E A L M ++G
Sbjct: 613 KAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFV 672
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
P+ YT+L+ G C+ + A + + ++ ++ + + + C+
Sbjct: 673 PNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCK 722
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 93/169 (55%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
++ +G P + + +N+ LCK K + +E++ + ++ +YN +++ LC +GR
Sbjct: 211 VMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGR 270
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L A+ + ++M KG+ P++ Y +L+ + + + D+M +G + N+ +N
Sbjct: 271 LDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNN 330
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
LI + ++G IEGAL++ M+ K + P + T SL++G C+ ++ A
Sbjct: 331 LIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHA 379
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 102/197 (51%), Gaps = 7/197 (3%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F + KG P+L T + +L K N+ ++ EV++V+S D+ S+ +++
Sbjct: 170 AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGAC-PDVFSFTNVIN 228
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G++ A + +M++ G+ P+V YN ++ C+ L A +L ++M G
Sbjct: 229 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 288
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
NLKTY LI+ ++ + + M+ G P+ + +L++G C+ N++ A ++
Sbjct: 289 NLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKI- 347
Query: 529 NKSVNHDVMLARSILST 545
DVM++++I T
Sbjct: 348 -----KDVMISKNITPT 359
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 197/427 (46%), Gaps = 15/427 (3%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSL-IQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLL 161
SVL +V D++ + +I L ++GK ++ V V+ C+ P++ NS++
Sbjct: 144 SVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ---PDVVTYNSIV 200
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
+ G AL + +M R V+ + I C + + +S+ E+ E
Sbjct: 201 NGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM---ETK 257
Query: 222 MINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
I SV+ ++ G CK + + +L ++ RE P+ I + ++ + F G + E
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+ K+ G++P Y + G ++ R+ EA + +++V K + D +LI
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 341 ---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
V +D + F + ++G V T S L + C+ K E+++ + ++
Sbjct: 378 YCMVKRVD--DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D+ +Y +++ LC +G+L +A + +++++ +D + Y +++E C+ + A L
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ + G N+ TY ++IS + G + A L M E G AP+ TY +L+ +
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 518 ETNLQAA 524
+ +L A+
Sbjct: 556 DGDLTAS 562
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 183/371 (49%), Gaps = 9/371 (2%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D+A+ +F EM S + F F F A+ Q +LD ++ E + I ++ +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRF---FSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126
Query: 231 -LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
++I+ FC+ + A+ VL ++ +PD + + + L G V E V++ + +
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDP 346
G P Y + G+ A +L + D + +I S+ ID
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID- 245
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+AI F M KG ++ T ++L + LCK K ++ + K + + + ++ ++NV+
Sbjct: 246 -AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ G+L+EA + +EM +G+ P++ YN+LM+ C ++ L A + D M + C
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
S ++ T+ LI + V ++ +++F N+ ++G+ +A TY+ L++G CQ ++ A E
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 527 VFNKSVNHDVM 537
+F + V+H V+
Sbjct: 425 LFQEMVSHGVL 435
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/440 (19%), Positives = 195/440 (44%), Gaps = 7/440 (1%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+P+ T ++++++K L L +++ ++ ++ N D Y I+ + + +T
Sbjct: 155 EPDTT----TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
A + +++ ++++ L DG ID A+ +F EM +G++ S + + +
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C+ K +L ++ RE ++ + +++ F K +++EA ++ E+ R
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSRE--IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
P+ I Y + + + + + E +L + +P + I G + +R+ +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 317 ELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
++ I + + L+ G S + A F M+ G +P + T L L
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C K ++ +E+++ L + + Y ++ +C G++ +A+ + + KG+ P+V
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y ++ C++ L A L +M G + N TYN LI G++ + +L
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Query: 496 MLEKGVAPDATTYTSLLEGL 515
M G + DA++ +++ L
Sbjct: 569 MKSCGFSADASSIKMVIDML 588
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/477 (19%), Positives = 196/477 (41%), Gaps = 48/477 (10%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S + + +++ ++Q N + KQ+++N I + +I + T A+SV
Sbjct: 87 SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+V + N+L+ L +G + A+ + D M G + + + + C +
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 206
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
G LD +RK E + V II C+ ++ A + E+ + K
Sbjct: 207 ---GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ Y + G + ++LK + P + + + E ++ EA EL
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL--- 320
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
+ MI +G P + T + L C +N+
Sbjct: 321 -------------------------------YKEMITRGISPNIITYNTLMDGYCMQNRL 349
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
E + ++ N D+ ++ ++ C R+ + V + + ++GL + Y+ L
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
++ C+ ++ A++L+ +M + G ++ TY IL+ + G++E AL +F ++ + +
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSILSTFMIS-LCRR 553
YT+++EG+C+ ++ A+ +F K V +VM T MIS LC++
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY-----TVMISGLCKK 521
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 96/194 (49%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
L + I AI F MI +P+L S + + + + +++ K L N
Sbjct: 60 LRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI 119
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ + N+M++ C + AY V+ ++ + G +PD + +N+L++ E + A
Sbjct: 120 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 179
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L D+M +GC ++ TYN +++ G+ AL L M E+ V D TY+++++ LC
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 517 QETNLQAAFEVFNK 530
++ + AA +F +
Sbjct: 240 RDGCIDAAISLFKE 253
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 134/303 (44%), Gaps = 13/303 (4%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWAS-QQPNFTH--------SP--LSYHSILKSLS 95
L +V+R I P ++T + L F Q+ N + SP ++Y++++
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
+ +++ +++L + NK + D + +I K VF +
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+ L+ G I A ++F EM GV + +G+ + C+N KL + L + +++
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+K + + G V+ II G CKG +VE+A+ + L + KP+ + Y ++ G
Sbjct: 465 QKSKMDL--GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
S+ E ++L+K + G AP Y I + + + + +L E + S F+ D +
Sbjct: 523 SLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIK 582
Query: 336 ALI 338
+I
Sbjct: 583 MVI 585
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 189/431 (43%), Gaps = 46/431 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N++L VL G ++ A + +M + G+ + F + + +C+ L + ++D +
Sbjct: 251 NTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMA- 309
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR-IVAEEFKLMGS 276
+N+++ ++I G CK +++EAF++ DE+ + PD + Y ++ F S
Sbjct: 310 -QNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSS 368
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLN 335
+ E++ K + K GV P Y + + E ++ A EL ++ SG F+ D N
Sbjct: 369 LKGFELIDKMEGK-GVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESG-FSPDCVTFN 426
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
LI G + A + M KG TL+ + LC K D+ ++ S
Sbjct: 427 TLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKR 486
Query: 395 DYFTDMESY-----------------------------------NVMVSFLCTSGRLREA 419
YF D SY N M+ LC SG+ ++
Sbjct: 487 GYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQS 546
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ E+ GL PD + YN+++ CRE + A + ++M +L T NIL+
Sbjct: 547 IDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRG 606
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHD 535
G ++ AL+LF+ + KG A DA TY +++ GLC+E + AF++ K + D
Sbjct: 607 LCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPD 666
Query: 536 VMLARSILSTF 546
+ILS
Sbjct: 667 CYTYNAILSAL 677
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 201/479 (41%), Gaps = 34/479 (7%)
Query: 68 LGFFNWASQ------QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV 121
LG+ A+Q Q N +Y+ ++ L +I+ + +++ K+ D
Sbjct: 295 LGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVT 354
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
Y +I ++ K F + ++++ N ++ +G +DNA +M
Sbjct: 355 YNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKME 414
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
G + F I +C+ +L + M+DE+ ++ M SV I+H C ++
Sbjct: 415 ESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKM--NSVTLNTILHTLCGERK 472
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+++A+K+L R D ++Y + + G E + + ++ + P Y
Sbjct: 473 LDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNT 532
Query: 302 FILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK 359
I GL + ++ +L E++ SG D+ N +I G A F N M++K
Sbjct: 533 MIGGLCHSGKTDQSIDKLNELLESG-LVPDETTYNTIILGYCREGQVEKAFQFHNKMVKK 591
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
P L T + L + LC D+ ++++ + D +YN ++S LC R EA
Sbjct: 592 SFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEA 651
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK----------KLWDQMFA------ 463
+ ++ EM+ K L PD YN+++ A ++ A+ KL DQ +
Sbjct: 652 FDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKI 711
Query: 464 -------SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
N T++ I++ G+ + A+ + +KG+ +TY SL+EGL
Sbjct: 712 ESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGL 770
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 105/497 (21%), Positives = 207/497 (41%), Gaps = 79/497 (15%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY++IL L ++N +L +K N + + + + ++ + ++A V +
Sbjct: 248 VSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDL 307
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSH-------------------- 182
+ N ++ P++ N L+ L DG ID A ++ DEM +
Sbjct: 308 MAQN--NVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDC 365
Query: 183 ---------------RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
+GV+ + + + V + + K G++ + +E+RK E S +
Sbjct: 366 SSSLKGFELIDKMEGKGVKPNAVTYNVVVKWY---VKEGKMDNAGNELRKMEESGFSPDC 422
Query: 228 IAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
+ +I+G+CK R+ EAF+++DE+ + K + + +
Sbjct: 423 VTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTI------------------- 463
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSID 345
+ L ER++ +A +L + +D+ LI G
Sbjct: 464 ----------------LHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGK 507
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
A+ ++ M EK +P++ T + + LC K+D+ ++ L + D +YN
Sbjct: 508 SVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNT 567
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++ C G++ +A+ +M +K PD+ N L+ C E +L A KL++ + G
Sbjct: 568 IILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKG 627
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+ + TYN +IS + E A L M EK + PD TY ++L L ++ A
Sbjct: 628 KAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAE 687
Query: 526 EVFNKSVNHDVMLARSI 542
E ++ V + ++I
Sbjct: 688 EFMSRIVEQGKLQDQTI 704
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%)
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
++NAL+ S + F+ +I+ G +T + L C NK E + + +
Sbjct: 180 LINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMK 239
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
F D SYN ++ LC G+L EA ++ +MK GL P+ + +N L+ C+ L+
Sbjct: 240 DFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLK 299
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A ++ D M + ++ TYN+LI + G+I+ A RL M + PD TY +L+
Sbjct: 300 EAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLI 359
Query: 513 EGLCQETNLQAAFEVFNK 530
G ++ FE+ +K
Sbjct: 360 NGCFDCSSSLKGFELIDK 377
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 3/141 (2%)
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR---EDLLRPAKKLWDQMFASGCSGNLK 471
R A + MKR L P++ N+L+ A R + + +K ++ + G N
Sbjct: 154 RPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTN 213
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
T+NILI ++ A+ L M + PD +Y ++L+ LC++ L A ++
Sbjct: 214 TFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDM 273
Query: 532 VNHDVMLARSILSTFMISLCR 552
N+ ++ R+ + + C+
Sbjct: 274 KNNGLLPNRNTFNILVSGYCK 294
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/530 (21%), Positives = 219/530 (41%), Gaps = 42/530 (7%)
Query: 66 LALGFFNWASQ-QPNFTHSPLSYHSILKSLSLSRQI-NAIDSVLKQVKVNKITLDSSVYR 123
L LGF + + F +++ +LK L ++ +A+D VL+++ + Y
Sbjct: 107 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYN 166
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMS 181
++ L +Q+A + + + D P++ + +++ +G +D A + EM
Sbjct: 167 ILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML 226
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
RG+ + + + I C+ + + + +L + K N ++ I+HG+C +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVK--NGVMPNCRTYNSIVHGYCSSGQ 284
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+EA L ++ +PD + Y + + G E + K G+ P Y
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI----------------------- 338
+ G + + E L +++V + V + LI
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 339 --------GSVSSIDPRS-----AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
G+V I +S A+ +F MI++ P ++L +LC +K D+
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
E+ + D +N ++ C GR+ E+ + M R G+ PD+ Y++L++
Sbjct: 465 ELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 524
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C + A KL M + G + TYN LI+ + ++ +E AL LF M GV+PD
Sbjct: 525 CLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDI 584
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
TY +L+GL Q AA E++ L S + + LC+ L
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 184/425 (43%), Gaps = 49/425 (11%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
++A +FDE+ RG S G + ++ V R + +
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER------EVVL 284
++I C R++ F L + + + D IA+ + L G ++ ++VL
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPL-----LKGLCADKRTSDAMDIVL 150
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN---ALIGSV 341
++ +LG P Y + GL E R EA EL +++ DV++ + G
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
D A ++ M+++G +P + T S++ LCK D+ +EV + N +
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN +V C+SG+ +EA G +++M G++PDV YNSLM+ C+ A+K++D M
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330
Query: 462 FASGCSGNLKTY-----------------------------------NILISKFSEVGEI 486
G + TY +ILI +++ G++
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
+ A+ +F M ++G+ PD TY +++ LC+ ++ A F + ++ + + ++
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSL 450
Query: 547 MISLC 551
+ SLC
Sbjct: 451 IHSLC 455
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 191/435 (43%), Gaps = 9/435 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y SI+ +L ++ ++ VL + N + + Y I+ ++A
Sbjct: 235 VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK- 293
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
K + + + P++ NSL+ L +G A KMFD M+ RG++ +G + +
Sbjct: 294 -KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L ++ +LD + R N V ++LI + K +V++A V ++R + PD +
Sbjct: 353 GALVEMHGLLD-LMVRNGIHPNHYVFSILIC-AYAKQGKVDQAMLVFSKMRQQGLNPDTV 410
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y V G V + ++ ++P Y I L + + +AKEL +
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ +D N++I S + R + F+ M+ G P + T S L C K
Sbjct: 471 LDRGICLDTIFFNSIIDSHCK-EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
DE ++ + + D +YN +++ C R+ +A + +EM+ G+ PD+ YN
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+++ + AK+L+ + SG L TYNI++ + + ALR+F N+
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649
Query: 501 VAPDATTYTSLLEGL 515
+ + T+ ++ L
Sbjct: 650 LQLETRTFNIMIGAL 664
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 178/424 (41%), Gaps = 13/424 (3%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVF-----NEVKFNCEDIGPEICNSLLAVLASDGYIDNALK 175
Y II +L + + KA V N V NC NS++ S G A+
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY-----NSIVHGYCSSGQPKEAIG 290
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+M GVE + + + C+N + + M D + KR + ++ G
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR--GLKPEITTYGTLLQG 348
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
+ + E +LD + P+ + I+ + G V + +V K R+ G+ P
Sbjct: 349 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFN 354
T Y I L R+ +A E ++ + + + V N+LI S+ D A
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL 468
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+++G +++ + CK + E +++ ++ D+ +Y+ ++ C +G
Sbjct: 469 EMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAG 528
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
++ EA ++ M G+ PD YN+L+ C+ + A L+ +M +SG S ++ TYN
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
I++ + A L+ + E G + +TY +L GLC+ A +F
Sbjct: 589 IILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 648
Query: 535 DVML 538
D+ L
Sbjct: 649 DLQL 652
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 189/435 (43%), Gaps = 15/435 (3%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++L+ + + + +L + N I + V+ +I + + +A VF+++
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ + + P+ +++ +L G +++A++ F++M + I + I C
Sbjct: 401 RQ--QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458
Query: 204 KLGQ----VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
K + +L MLD + N II CK RV E+ K+ D + KP
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNS------IIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D I Y + + + L G + E +L +G+ P Y I G R+ +A L
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 320 EVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ S + D N ++ G + +A + + E G LST + + LCK
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
N +DE + +++ L D + ++N+M+ L GR EA + + GL PDV Y
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTY 692
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
+ + E + LL L+ M +GC+ N + N ++ K + G+I A + E
Sbjct: 693 SLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDE 752
Query: 499 KGVAPDATTYTSLLE 513
K + +A+T + L+
Sbjct: 753 KHFSLEASTASLFLD 767
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 164/366 (44%), Gaps = 3/366 (0%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ A G +D A+ +F +M +G+ T+ +G I C++ ++ + +++ +
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI--D 437
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+ G+++ +IH C + ++A +++ E+ R D I + + + G V E
Sbjct: 438 ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIE 497
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
E + ++GV P Y I G + ++ EA +L +VS D N LI
Sbjct: 498 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN 557
Query: 340 SVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
I A+V F M G P + T + + + L + ++ E+Y ++ +
Sbjct: 558 GYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQL 617
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
++ +YN+++ LC + EA + Q + L + +N ++ A + AK L+
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ A+G +++TY+++ E G +E LF +M E G ++ S++ L Q
Sbjct: 678 AALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQR 737
Query: 519 TNLQAA 524
++ A
Sbjct: 738 GDITRA 743
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 97/206 (47%), Gaps = 7/206 (3%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS---ANDYFTDMESYNVMVSF 409
F+ ++ +GR ++ L N + R+ V Y ++ A++ ++ +Y +++
Sbjct: 42 FDELLRRGRGASIYGL-NCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGS 100
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL-WDQMFASGCSG 468
C +GRL + + + +KG D + L++ C + A + +M GC
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIP 160
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKG--VAPDATTYTSLLEGLCQETNLQAAFE 526
N+ +YNIL+ + + AL L M + G PD +YT+++ G +E +L A+
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+++ ++ ++ S+ + +LC+
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCK 246
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 200/483 (41%), Gaps = 49/483 (10%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S ++Y I+ S + A D + K TL++S+Y II + Q N ++A ++
Sbjct: 378 SLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALV 437
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYI-----DNALKMFDEMSHRGVEFSTIGFGVFIW 197
E++ D I ++++ DGY L +F + G + + +G I
Sbjct: 438 REMEEEGIDAPIAIYHTMM-----DGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLIN 492
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
+ + K+ + L + V K E N + ++I+GF K K AF V +++
Sbjct: 493 LYTKVGKISKALE-VSRVMKEEGVKHNLKTYS-MMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL--------------------------- 290
KPD I Y + F MG++ +K+ +KL
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Query: 291 --------GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
G P + + I GL+ +R+ E L E+ ++G + + G S
Sbjct: 611 VFDMMRRCGCVPTVHTFNGLINGLVEKRQAVEI--LDEMTLAGVSANEHTYTKIMQGYAS 668
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
D A +F + +G + T L K CK + + V K +SA + +
Sbjct: 669 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 728
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN+++ G + EA +IQ+MK++G+ PD+ Y S + AC + + A + ++M
Sbjct: 729 YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME 788
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
A G N+KTY LI ++ E AL + M G+ PD Y LL L ++
Sbjct: 789 ALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIA 848
Query: 523 AAF 525
A+
Sbjct: 849 EAY 851
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 155/373 (41%), Gaps = 6/373 (1%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
I SL+ A +D AL +M G+E S + + V + F + DE
Sbjct: 346 IYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEA 405
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
KR + +N S+ II+ C+ +E A ++ E+ Y + + + ++
Sbjct: 406 -KRIHKTLNASIYGK-IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVA 463
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ VV K+ ++ G P Y I +I +A E+ V+ + +
Sbjct: 464 DEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYS 523
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I G V D +A F M+++G P + +N+ C D ++ K +
Sbjct: 524 MMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL 583
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ ++ ++ SG +R + V M+R G P V +N L+ + R A
Sbjct: 584 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEK---RQA 640
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++ D+M +G S N TY ++ ++ VG+ A F + +G+ D TY +LL+
Sbjct: 641 VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKA 700
Query: 515 LCQETNLQAAFEV 527
C+ +Q+A V
Sbjct: 701 CCKSGRMQSALAV 713
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/395 (18%), Positives = 158/395 (40%), Gaps = 51/395 (12%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
FG+ + + + + + +R R + S I +IH + G+ ++EA + +
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRAR--GITPTSRIYTSLIHAYAVGRDMDEALSCVRK 369
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI---- 307
++ + + Y ++ F G + + +++ + Y + I
Sbjct: 370 MKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCN 429
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
+ER +E+ E + I +++ G D + +V F + E G PT+ T
Sbjct: 430 MERAEALVREMEEEGIDAPIAIYHTMMD---GYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
L K K + +EV +V+ ++++Y++M++ A+ V ++M
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 428 RKGLDPDVSFYNSLMEACC-----------------------------------REDLLR 452
++G+ PDV YN+++ A C + +R
Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 606
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
+ +++D M GC + T+N LI+ E + A+ + M GV+ + TYT ++
Sbjct: 607 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQ---AVEILDEMTLAGVSANEHTYTKIM 663
Query: 513 EGLCQETNLQAAFEVF----NKSVNHDVMLARSIL 543
+G + AFE F N+ ++ D+ ++L
Sbjct: 664 QGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 698
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 57/317 (17%), Positives = 122/317 (38%), Gaps = 17/317 (5%)
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
H KS + R + D + + V + + +I L++ ++A + +E+
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTV----HTFNGLINGLVE---KRQAVEILDEMTL 649
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
++ AS G A + F + + G++ + + C++ ++
Sbjct: 650 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 709
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
L++ E+ R ++ S + ++I G+ + V EA ++ +++ KPD Y
Sbjct: 710 ALAVTKEMSAR--NIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSF 767
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL----IVERRICEAKELGEVIV 323
G + +++ LGV P Y I G + E+ + +E+ + +
Sbjct: 768 ISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 827
Query: 324 SGKFTIDDDVLNALIGSVSSIDP---RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ +L +L+ S + + M+E G + + T + SK LCK
Sbjct: 828 KPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEA 887
Query: 381 S-DELVEVYKVLSANDY 396
S EL E + D+
Sbjct: 888 SGGELTETLQKTFPPDW 904
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 186/403 (46%), Gaps = 15/403 (3%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
+L +A D + +F +M + G+ F + I FC ++ L++L ++ K
Sbjct: 621 VLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLG 680
Query: 220 NSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF---KLMG 275
S++ + +++GFC+G R +EA ++D + +P+ + Y V + +
Sbjct: 681 ---FQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLN 737
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL- 334
+ E ++KK G+ Y I GL R +A L +V K ID +V+
Sbjct: 738 NALEIFYGMEKK---GIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRK--IDPNVIF 792
Query: 335 -NALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
ALI + V + A + MI + P + T ++L C + + + ++ ++
Sbjct: 793 FTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMV 852
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ F D+ +YN +++ C S R+ + + EM +GL D YN+L+ C+ L
Sbjct: 853 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLN 912
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A+K++++M G ++ TYNIL+ G+IE AL + ++ + + D TY ++
Sbjct: 913 VAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIII 972
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
+G+C+ ++ A+ +F V L T + LCR L
Sbjct: 973 QGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGL 1015
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 141/324 (43%), Gaps = 2/324 (0%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++IH FC+ R+ A +L ++ P + + + F L + + ++ K
Sbjct: 105 ILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKS 164
Query: 291 GVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALI-GSVSSIDPRS 348
G P Y I L + A EL E+ G+ D N L+ G S + R
Sbjct: 165 GYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQ 224
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A M ++ P + T + L K+ DE E+YK + + + +YN +++
Sbjct: 225 AARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLIN 284
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC GRL A M KG P+V YN+L+ C+ + KL+ +M+ G G
Sbjct: 285 GLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVG 344
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ TYN LI + +VG++ A +F M+ GV PD T+ LL GLC + +A F
Sbjct: 345 DTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKF 404
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
N + + L + + LC+
Sbjct: 405 NDMRSGEKYLGIVAYNIMIHGLCK 428
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/466 (21%), Positives = 187/466 (40%), Gaps = 47/466 (10%)
Query: 70 FFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSL 129
F QP S + + +L +++ R+ + +Q+++ I+ D + +I
Sbjct: 53 FLEMVQSQP--LPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCF 110
Query: 130 IQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
+ A S+ ++ D SLL I +A + M G E +
Sbjct: 111 CRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNV 170
Query: 190 IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIH-----GFCKGKRVEE 244
+ + I C+N + L +L+E+ K+ G + A L+ + G C +
Sbjct: 171 VVYNTLIDCLCKNGDVNIALELLNEMEKK------GRLAADLVTYNTLLTGLCYSGEWRQ 224
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A ++L ++ R PD + + + F G++ E + + K+ + + P T Y I
Sbjct: 225 AARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLIN 284
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT 364
GL + R+ AK+ F+ M KG P
Sbjct: 285 GLCMHGRLYHAKKT----------------------------------FDLMASKGCFPN 310
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
+ T + L CK + ++ +++++ + D +YN ++ C G+LR A +
Sbjct: 311 VVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFS 370
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
M G+ PD+ + L+ C + A ++ M + + YNI+I +
Sbjct: 371 WMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKAD 430
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
++E A LF + +GV PDA TYT ++ GLC+ + A E+F +
Sbjct: 431 KVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRR 476
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 157/356 (44%), Gaps = 3/356 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
SLL A+ + D M+ G+E + + + I C+N L L + + K
Sbjct: 689 GSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEK 748
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ ++ +V +I G C R +A ++L ++ R+ P+ I + + + F G++
Sbjct: 749 K--GIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 806
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E + + K+ + V P Y I G ++ R+ +AK + +++VS D N L
Sbjct: 807 LEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTL 866
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G S + F M +G V T + L C+ K + +V+ +
Sbjct: 867 ITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 926
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ +YN+++ LC +G++ +A +++++++ +D D+ YN +++ CR D ++ A
Sbjct: 927 PPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWC 986
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
L+ + G + Y +IS G A +L M E G P Y L
Sbjct: 987 LFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETL 1042
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 176/398 (44%), Gaps = 10/398 (2%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK-- 217
LL +A+ + + +M G+ F + I FC ++L LS+L ++ K
Sbjct: 71 LLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLG 130
Query: 218 RENSMIN-GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+ S++ GS ++HGFC R+ +AF ++ + +P+ + Y + + G
Sbjct: 131 YDPSIVTFGS-----LLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGD 185
Query: 277 V-FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
V E++ + ++K +A Y + GL +A + + + D
Sbjct: 186 VNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFT 245
Query: 336 ALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
ALI + V + A + M++ P T ++L LC + + + ++++
Sbjct: 246 ALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASK 305
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
F ++ +YN +++ C S R+ + + Q M R+GL D YN+L+ C+ LR A
Sbjct: 306 GCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVA 365
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K ++ M + G + ++ T+ IL+ GEI A+ F++M Y ++ G
Sbjct: 366 KDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHG 425
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
LC+ ++ A+E+F + V + ++ LC+
Sbjct: 426 LCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCK 463
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 154/347 (44%), Gaps = 13/347 (3%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE----ICNSLLAVLASDGYIDNALKMFDEM 180
++ QG Q+A S+ + + ++G E I N+++ L + ++NAL++F M
Sbjct: 691 LLNGFCQGNRFQEAVSLVDSMA----ELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGM 746
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGFCKG 239
+G+ + + I C + + +L ++ KR+ I+ +VI +I F K
Sbjct: 747 EKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRK---IDPNVIFFTALIDTFVKE 803
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+ EA + E+ R P+ + Y + F + G + + + + G P Y
Sbjct: 804 GNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTY 863
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIE 358
I G +R+ + +L + D N LI G + A FN M++
Sbjct: 864 NTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 923
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
G P + T + L LC K ++ + + + L N D+ +YN+++ +C + +++E
Sbjct: 924 CGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKE 983
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
A+ + + + RKG+ D Y +++ CR L R A KL +M G
Sbjct: 984 AWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDG 1030
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/403 (19%), Positives = 167/403 (41%), Gaps = 14/403 (3%)
Query: 70 FFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSL 129
+F+ + +H S+ ++ +++ S+L K+ K+ D S+ F SL
Sbjct: 86 YFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILG--KMMKLGYDPSIVTF--GSL 141
Query: 130 IQG----KNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG- 184
+ G AFS+ + + + + N+L+ L +G ++ AL++ +EM +G
Sbjct: 142 LHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGR 201
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGFCKGKRVE 243
+ + + + C + + Q +L ++ KR IN V +I F K ++
Sbjct: 202 LAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRR---INPDVFTFTALIDAFVKQGNLD 258
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
EA ++ ++ P+ + Y + + G ++ + G P Y I
Sbjct: 259 EAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLI 318
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRV 362
G RR+ + +L + + D N LI + R A F++M+ G
Sbjct: 319 NGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVT 378
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + T L LC + + + + + + + + +YN+M+ LC + ++ EA+ +
Sbjct: 379 PDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWEL 438
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+ +G+ PD Y ++ C+ R A +L+ +M G
Sbjct: 439 FCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDG 481
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 110/552 (19%), Positives = 224/552 (40%), Gaps = 51/552 (9%)
Query: 36 QTLHQLGLRDSLSPSLVA--RVINPYLLTHHSL--ALGFFNWASQQPNFTHSPLSYHSIL 91
Q L++ L+ S+ P+ V +IN L H L A F+ + + F + ++Y++++
Sbjct: 261 QELYKQMLQSSIGPNTVTYNSLING-LCMHGRLYHAKKTFDLMASKGCFPNV-VTYNTLI 318
Query: 92 KSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCED 151
SR++ + +++ + D+ Y +I Q + A +F+ + +C
Sbjct: 319 NGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWM-VSC-G 376
Query: 152 IGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ P+I LL L +G I +A+ F++M + + + I C+ K+ +
Sbjct: 377 VTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAW 436
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+ + E + ++I+ G CK EA DEL R K D I +
Sbjct: 437 ELFCRL-PVEGVKPDARTYTIMIL-GLCKNGPRREA----DEL-FRRMKEDGIICQAEDG 489
Query: 270 EFKLMGS---VFEREVVLKKKRKLGVAPRTNDYREF--------ILGLI----------- 307
G+ V +++ KR+ + + Y + ++GLI
Sbjct: 490 HLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSSVKGF 549
Query: 308 VERRIC--------EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
V R + E++ L + I A F M++
Sbjct: 550 VRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQS 609
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
+P++ + + + K NK D ++ ++ + D+ S+ +++ C R A
Sbjct: 610 RPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLA 669
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
++ +M + G P + SL+ C+ + + A L D M G N+ YN +I+
Sbjct: 670 LALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVING 729
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF----EVFNKSVNHD 535
+ ++ AL +F+ M +KG+ DA TY +L+ GLC A ++ + ++ +
Sbjct: 730 LCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPN 789
Query: 536 VMLARSILSTFM 547
V+ +++ TF+
Sbjct: 790 VIFFTALIDTFV 801
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 5/214 (2%)
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G + SI A+ F M++ +P++ + L + + + ++ + +
Sbjct: 39 GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D+ S+ +++ C RL A ++ +M + G DP + + SL+ C + + A L
Sbjct: 99 DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG-VAPDATTYTSLLEGLCQ 517
M SG N+ YN LI + G++ AL L + M +KG +A D TY +LL GLC
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218
Query: 518 ETNLQAAFEVF----NKSVNHDVMLARSILSTFM 547
+ A + + +N DV +++ F+
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDAFV 252
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 103/530 (19%), Positives = 196/530 (36%), Gaps = 57/530 (10%)
Query: 51 LVARVINPYLLTHHSLALGFFNWASQ-----------QPNFTHSPLSYHSILKSLSLSRQ 99
+ R INP + T +L F + Q + + ++Y+S++ L + +
Sbjct: 232 MTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGR 291
Query: 100 INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC-N 158
+ + + Y +I + + + +F + + +G N
Sbjct: 292 LYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRM-YREGLVGDTFTYN 350
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L+ G + A +F M GV I + + C N ++G + +++R
Sbjct: 351 TLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSG 410
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
E + G V ++IHG CK +VEEA+++ L + KPD Y I+ G
Sbjct: 411 EKYL--GIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 468
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK------------ 326
E + + ++ ++ G+ + D G + E LG +I+ K
Sbjct: 469 EADELFRRMKEDGIICQAED------GHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLY 522
Query: 327 -FTIDDDVLNALIGSVSSIDPRSAIVFFN---FMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+ D + ++L+G + S F ++E+G P + S S +
Sbjct: 523 YYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHH------- 575
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
+ Y + S + F +A+G+ EM + P + + ++
Sbjct: 576 ------HHHHHHHYRERLRSELHCIKF-------DDAFGLFCEMLQSRPIPSIVDFTRVL 622
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
A + + L+ +M G S +L ++ ILI F AL L M++ G
Sbjct: 623 TAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQ 682
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
P T SLL G CQ Q A + + + I +T + LC+
Sbjct: 683 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCK 732
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 100/256 (39%), Gaps = 26/256 (10%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDS 105
+L ++ R ++P +LT++SL GF + ++
Sbjct: 811 NLYKEMIRRSVHPNILTYNSLINGF------------------------CIQGRLGDAKH 846
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLA 165
+ + D Y +I + K + +F E+ N+L+
Sbjct: 847 MFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYC 906
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMING 225
G ++ A K+F+ M GV + + + + C N K+ + L M+++++K N M
Sbjct: 907 QAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQK--NQMDVD 964
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
+ +II G C+ +V+EA+ + L + K D IAY + G E + +
Sbjct: 965 IITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCT 1024
Query: 286 KKRKLGVAPRTNDYRE 301
+ ++ G P Y E
Sbjct: 1025 RMKEDGFMPSERIYDE 1040
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 118/533 (22%), Positives = 224/533 (42%), Gaps = 85/533 (15%)
Query: 70 FFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSL 129
F+W +Q + HS +Y+ L +L+ + +Q++ D Y ++ L
Sbjct: 24 LFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGL 83
Query: 130 IQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGY-----IDNALKMFDEMSHRG 184
+ KA + +++ + G ++ N + + DG +D+AL++F MS G
Sbjct: 84 CKAGELDKAKELLGQLR----ESGVKL-NVITYSVVIDGCCKASRVDDALEIFKTMSAGG 138
Query: 185 -VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR--ENSMINGSVIAVLIIHGFCKGKR 241
+ F + C ++ + + + + K E ++I+ S + + G CK R
Sbjct: 139 GCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTL----LDGLCKAGR 194
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE-----REVVLKKKRKLGVAPRT 296
++EA ++ +E+ + C PD +AY V E R++V K + VA T
Sbjct: 195 LDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFST 254
Query: 297 NDYREFILGLIVER------------RIC------EAKELGEVIVSGKFTIDDDVLNALI 338
++G++ ++ +C EA + E ++S ++ N LI
Sbjct: 255 ------VIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLI 308
Query: 339 GSV--SSIDPRSAIVF--FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+V S P ++F M E P L T + + NLCK + DE E+ ++
Sbjct: 309 HAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANY 368
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL----------------------- 431
D+ +Y+ +V LC G+L A +++EM ++G+
Sbjct: 369 GLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYA 428
Query: 432 ------------DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
PD+ YN+L++ C+ + A +M A+ C+ ++ +Y I+I+
Sbjct: 429 LSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITA 488
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
G+ GA +F M+++GV PD Y SLL+GL + A E+ S+
Sbjct: 489 LCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL 541
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/517 (19%), Positives = 201/517 (38%), Gaps = 66/517 (12%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
Q+ + +Y +L+ L + +++ +L Q++ + + L+ Y +I +
Sbjct: 65 QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRV 124
Query: 136 QKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
A +F + + P++ NSLL L S + A +F+ M+ G E + I +
Sbjct: 125 DDALEIFKTMSAGGGCV-PDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYS 183
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRE--------NSMING-------------------- 225
+ C+ +L + + +E+ ++ S + G
Sbjct: 184 TLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTK 243
Query: 226 ----------SVIAVL------------IIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+VI +L +I C+ ++EA K +E+ R P
Sbjct: 244 GSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAEL 303
Query: 264 Y----RIVAEEFKLMGSV--FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
+ V + +L V F+R +K ++ P Y + L +++ EA+E
Sbjct: 304 FNTLIHAVCKSKRLPDGVLLFQR---MKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQE 360
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
L + + + D +AL+ + + A M ++G P T +++ L
Sbjct: 361 LVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALS 420
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K K D + + + A D+ +YN ++ LC +GR+ EA + +M PDV
Sbjct: 421 KAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVF 480
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
Y ++ A CR A ++ +M G + Y+ L+ + G + AL L
Sbjct: 481 SYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTS 540
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
L K PD + +++GLC+ + A EV + +
Sbjct: 541 LCK---PDFVMHKMVVDGLCKAGKAEDACEVVERMAD 574
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/246 (18%), Positives = 101/246 (41%), Gaps = 7/246 (2%)
Query: 75 SQQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQG 132
++ N+ SP ++Y +++ L +++ +L+++ + DS I+ +L +
Sbjct: 363 NEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKA 422
Query: 133 KNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
A S +K N+LL L G ID A+ +M +
Sbjct: 423 GKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSY 482
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
+ I C + + ++ E+ KR ++ +V+ ++ G + + A ++L
Sbjct: 483 TIIITALCRSGQAAGAHAIFQEMVKR--GVLPDTVLYHSLLDGLARNGLEDLALELL--- 537
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
+ CKPDF+ +++V + G + V+++ G Y + GL ++
Sbjct: 538 KTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKV 597
Query: 313 CEAKEL 318
+A++L
Sbjct: 598 DKARQL 603
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 136/297 (45%), Gaps = 34/297 (11%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I+G C + A + DE+ +P+ Y + + F +G +LKK K G
Sbjct: 160 LINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAG 219
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
P Y I GL +R + EA D+ + + G
Sbjct: 220 GRPDIVIYNTIIDGLCKDRLVSEAL---------------DIFSEIKG------------ 252
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
KG P + T S L LC ++ +E ++ + + + D+ ++N++V LC
Sbjct: 253 -------KGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLC 305
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
G L EA G+I+ M KG++P+ + YNSLM C ++ + A+ ++D M GC N+
Sbjct: 306 KEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVV 365
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+YNILI+ + + I+ A LF M +G+ P+ Y +L+ GLCQ A E+F
Sbjct: 366 SYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELF 422
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 179/404 (44%), Gaps = 5/404 (1%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+ + +L +L + + S+ K++++ +I D + +I + + AFSV +
Sbjct: 85 VEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGK 144
Query: 145 V-KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ K E +SL+ L + A++ FDEM G + + + I FC+
Sbjct: 145 IIKLGFEPDAVTF-SSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIG 203
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
K + +L ++ K VI II G CK + V EA + E++ + +PD
Sbjct: 204 KTTVAVGLLKKMDKAGGR--PDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFT 261
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y I+ E + + L + P + + L E + EA+ + ++++
Sbjct: 262 YSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMI 321
Query: 324 SGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+ N+L+ G A + F+ MI KG +P + + + L CK + D
Sbjct: 322 EKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRID 381
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E E++ +S + +YN ++S LC +GR EA + ++M+ +G PD+ L+
Sbjct: 382 EARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILL 441
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
++ C+ L A +L+ M S NL TY+ILI + G+I
Sbjct: 442 DSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 2/221 (0%)
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
LG++I G F D ++LI + D + A+ FF+ M+ G P L T + + K C
Sbjct: 142 LGKIIKLG-FEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFC 200
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K K+ V + K + D+ YN ++ LC + EA + E+K KG+ PDV
Sbjct: 201 KIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVF 260
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
Y+ LM C D A L+++M + ++ T+NIL+ K + G + A + M
Sbjct: 261 TYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIM 320
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+EKGV P+ TY SL+ G C + + A VF+ + M
Sbjct: 321 IEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCM 361
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 8/207 (3%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ FN MI K +P + L L + ++ + K + D+ +N++++
Sbjct: 68 ALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILIN 127
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
R+ A+ V+ ++ + G +PD ++SL+ C ED A + +D+M ASG
Sbjct: 128 CFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQP 187
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
NL TYN +I F ++G+ A+ L M + G PD Y ++++GLC++ + A ++F
Sbjct: 188 NLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIF 247
Query: 529 N----KSVNHDVMLARSILSTFMISLC 551
+ K V DV S M LC
Sbjct: 248 SEIKGKGVRPDVF----TYSILMHGLC 270
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
ID A ++FDEMS RG+ +T + I C+ + + + +++ + S V
Sbjct: 380 IDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCS--PDLVTC 437
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+++ CK ++ A ++ ++ KP+ + Y I+ G ++
Sbjct: 438 TILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKIY 486
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 143/309 (46%), Gaps = 4/309 (1%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I+GFC G R+EEA +++++ KPD + Y + + G V + + G
Sbjct: 147 LINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYG 206
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAI 350
+ P Y + GL R +A L ++ K D NALI + V A
Sbjct: 207 IRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAK 266
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+N MI+ P + T ++L LC + DE +++ ++ F D+ +Y +++
Sbjct: 267 ELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGF 326
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C ++ +A + EM +KGL + Y +L++ A++++ M + G N+
Sbjct: 327 CKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNI 386
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEK---GVAPDATTYTSLLEGLCQETNLQAAFEV 527
+TYN+L+ G++ AL +F +M ++ GV P+ TY LL GLC L+ A V
Sbjct: 387 RTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMV 446
Query: 528 FNKSVNHDV 536
F D+
Sbjct: 447 FGDMQKRDM 455
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 175/366 (47%), Gaps = 8/366 (2%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
I+ A+ M ++M G++ + + I C+N + LS+ +++ EN I V+
Sbjct: 157 IEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQM---ENYGIRPDVVM 213
Query: 230 VL-IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+++G C R +A +L + R+ KPD I + + + F G + + + + +
Sbjct: 214 YTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMI 273
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPR 347
++ +AP Y I GL +E R+ EA+++ ++ + D +LI G
Sbjct: 274 QMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVE 333
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A+ F M +KG T + L + K + EV+ + + ++ +YNV++
Sbjct: 334 DAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLL 393
Query: 408 SFLCTSGRLREAYGVIQEMKRK---GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
LC +G++ +A + ++M+++ G+ P++ YN L+ C L A ++ M
Sbjct: 394 HCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKR 453
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
+ TY I+I + G+++ AL LF ++ KGV P+ TYT+++ GL +E + A
Sbjct: 454 DMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEA 513
Query: 525 FEVFNK 530
+F K
Sbjct: 514 HVLFRK 519
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 182/435 (41%), Gaps = 57/435 (13%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
F ++ S++ L +I S++ Q+ I D +Y II SL + + A
Sbjct: 137 FEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNAL 196
Query: 140 SVFNEVKFNCEDIG--PEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
S+FN++ E+ G P++ SL+ L + G +A + M R ++ I F
Sbjct: 197 SLFNQM----ENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNAL 252
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-----IIHGFCKGKRVEEAFKVLD 250
I F + KL LD ++ N MI S+ + +I+G C R++EA ++
Sbjct: 253 IDAFVKEGKL------LD-AKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFY 305
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
+ + C PD +AY + F V + + + + G+ T Y I G
Sbjct: 306 LMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGF---- 361
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
L+G P A F M+ +G P + T +
Sbjct: 362 -------------------------GLVGK-----PNVAQEVFGHMVSRGVPPNIRTYNV 391
Query: 371 LSKNLCKRNKSDELVEVYKVLSAND---YFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
L LC K ++ + +++ + + ++ +YNV++ LC +G+L +A V +M+
Sbjct: 392 LLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQ 451
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
++ +D + Y +++ C+ ++ A L+ + + G N+ TY +IS G +
Sbjct: 452 KRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLML 511
Query: 488 GALRLFHNMLEKGVA 502
A LF M E GV+
Sbjct: 512 EAHVLFRKMKEDGVS 526
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 6/217 (2%)
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
S P A F +++ G P + T ++L C N+ +E + + + D+
Sbjct: 118 QSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVV 177
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
Y ++ LC +G + A + +M+ G+ PDV Y SL+ C R A L M
Sbjct: 178 IYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGM 237
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
++ T+N LI F + G++ A L++ M++ +AP+ TYTSL+ GLC E L
Sbjct: 238 MKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRL 297
Query: 522 QAAFEVF----NKSVNHDVMLARSILSTFMISLCRRV 554
A ++F K DV+ S+++ F C++V
Sbjct: 298 DEARQMFYLMETKGCFPDVVAYTSLINGF--CKCKKV 332
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 88/185 (47%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ S+ A+ F+ M+E +P++ + L + K K D ++ + K L D
Sbjct: 46 GLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSND 105
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ + N++++ C S + A + ++ + G +PD+ + SL+ C + + A + +
Sbjct: 106 LYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVN 165
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
QM G ++ Y +I + G ++ AL LF+ M G+ PD YTSL+ GLC
Sbjct: 166 QMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSG 225
Query: 520 NLQAA 524
+ A
Sbjct: 226 RWRDA 230
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%)
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G S +L T N+L++ F + + A +++ G PD T+TSL+ G C ++ A
Sbjct: 101 GVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEA 160
Query: 525 FEVFNKSVNHDVMLARSILSTFMISLCR 552
+ N+ V + I +T + SLC+
Sbjct: 161 MSMVNQMVEMGIKPDVVIYTTIIDSLCK 188
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/498 (22%), Positives = 214/498 (42%), Gaps = 62/498 (12%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFF--NWASQ-------------QPNFTHSPLSYHSI 90
+L +V P +T +L G F N AS+ QP+ ++Y ++
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL----VTYGAV 211
Query: 91 LKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCE 150
+ L + + ++L +++ KI D +Y +I SL + ++ A ++F E+ + +
Sbjct: 212 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM--DNK 269
Query: 151 DIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV 208
I P++ +SL++ L + G +A ++ +M R + + + F I F + KL +
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 209 LSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
+ DE+ +R I+ +++ +I+GFC R++EA ++ + ++C PD + Y +
Sbjct: 330 EKLFDEMIQRS---IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
F V + + + + G+ T Y I G
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF-------------------- 426
Query: 328 TIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
+ D +A + F M+ G P + T + L LCK K ++ + V
Sbjct: 427 --------------QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
++ L + D+ +YN+M +C +G++ + + + + KG+ PDV YN+++ C+
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+ L A L+ +M G + TYN LI G+ + L M A DA+T
Sbjct: 533 KGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAST 592
Query: 508 YTSLLEGLCQETNLQAAF 525
Y L+ + + L F
Sbjct: 593 Y-GLVTDMLHDGRLDKGF 609
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 176/396 (44%), Gaps = 7/396 (1%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL+ +A D + ++M GV + + + I C ++L L++L ++ K
Sbjct: 71 LLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMK-- 128
Query: 220 NSMINGSVIAVL--IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ G I L +++GFC G R+ EA ++D++ +PD + + +
Sbjct: 129 --LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 186
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E ++++ G P Y I GL A L + GK D + + +
Sbjct: 187 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTV 246
Query: 338 IGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I S+ A+ F M KG P + T S+L LC + + + +
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ ++N ++ G+L EA + EM ++ +DP++ YNSL+ C D L A++
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
++ M + C ++ TYN LI+ F + ++ + LF +M +G+ + TYT+L+ G
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
Q ++ A VF + V+ V +T + LC+
Sbjct: 427 QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/484 (20%), Positives = 219/484 (45%), Gaps = 23/484 (4%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S + + +L +++ ++ + + S +++++ ++ + Y +I L + +Q +F++
Sbjct: 64 SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLC--RRSQLSFALA 121
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
K GP I NSLL I A+ + D+M G + T+ F +
Sbjct: 122 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 181
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGS----VIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
++ K + ++++ E ++ G V +I+G CK + A +L+++ +
Sbjct: 182 QHNKASEAVALV------ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 235
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
+ D + Y V + V + + + G+ P Y I L R +A
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDPR-SAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
L ++ K + N+LI + + A F+ MI++ P + T ++L
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C ++ DE +++ ++ + D D+ +YN +++ C + ++ + + ++M R+GL +
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y +L+ + A+ ++ QM + G N+ TYN L+ + G++E A+ +F
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 475
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN----KSVNHDVMLARSILSTFMISLC 551
+ + + PD TY + EG+C+ ++ +++F K V DV+ +++S F C
Sbjct: 476 LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF----C 531
Query: 552 RRVL 555
++ L
Sbjct: 532 KKGL 535
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 199/455 (43%), Gaps = 15/455 (3%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
+ S ++ +S+L +I+ +++ Q+ D+ + ++ L Q +A
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190
Query: 140 SVFNE-VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
++ V C+ P++ +++ L G D AL + ++M +E + + I
Sbjct: 191 ALVERMVVKGCQ---PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 197 WKFCENAKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
C+ + L++ E+ R + S+I+ L C R +A ++L ++
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL-----CNYGRWSDASRLLSDML 302
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
R+ P+ + + + + F G + E E + + + + P Y I G + R+
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 314 EAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
EA+++ ++VS D N LI G + + F M +G V T + L
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
+ + D V+K + ++ ++ +YN ++ LC +G+L +A V + +++ ++
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
PD+ YN + E C+ + L+ + G ++ YN +IS F + G E A L
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
F M E G PD+ TY +L+ ++ + A+ E+
Sbjct: 543 FIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 577
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 157/377 (41%), Gaps = 11/377 (2%)
Query: 183 RGVEFSTIGFGVFIWKFCENA----KLGQVLSMLDEVRKREN--SMINGSVIAVLIIHGF 236
RG+ FS + + + K NA KL + + + E+ K S++ S + +
Sbjct: 20 RGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKL----LSAI 75
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
K K+ + +++ I + Y I+ + +L K KLG P
Sbjct: 76 AKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSI 135
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNF 355
+ G RI EA L + +V + D L+ + + S A+
Sbjct: 136 VTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER 195
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M+ KG P L T + LCKR + D + + + D+ Y+ ++ LC
Sbjct: 196 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH 255
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ +A + EM KG+ PDV Y+SL+ C A +L M + N+ T+N
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNS 315
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI F++ G++ A +LF M+++ + P+ TY SL+ G C L A ++F V+ D
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 536 VMLARSILSTFMISLCR 552
+ +T + C+
Sbjct: 376 CLPDVVTYNTLINGFCK 392
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/447 (21%), Positives = 201/447 (44%), Gaps = 11/447 (2%)
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNAL 174
I D +Y +I L + ++ S+F+ + I +S++ G + A+
Sbjct: 306 IVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAI 365
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR--ENSMINGSVIAVLI 232
+++ M G+ + + + + I C N ++ + + ++ K+ E S++ S +
Sbjct: 366 EVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSL---- 421
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I GFCK + + + F + + + PD + ++ G + E + K G+
Sbjct: 422 IDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGL 481
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---GSVSSIDPRSA 349
+ I G +R + ++ I+ G + + DV+ + G A
Sbjct: 482 TLNNYLFNALIDGCFRLKRTRDGLKM--YILMGMYKVIPDVVTYTVLVKGLAEQGRLDEA 539
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ F +++KG P L CK+ ++++K++ +N F D+ YNV+++
Sbjct: 540 LALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINM 599
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
G + +++E+ + GL+PD+ YN+++ C + A KL++ + N
Sbjct: 600 FFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPN 659
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
T+ ILI + + G ++ A+ +F +MLE+G P+ TY+ L++G + N ++AFE++
Sbjct: 660 AITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYE 719
Query: 530 KSVNHDVMLARSILSTFMISLCRRVLI 556
K + V S + LC++ L+
Sbjct: 720 KMLGDRVSPNIVSYSILIDGLCKKGLM 746
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 114/503 (22%), Positives = 215/503 (42%), Gaps = 54/503 (10%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A+ F W S+ +S+++ + L L + ID +L+ + ++ VY F+
Sbjct: 159 AVDTFAWMSKMG----VSISHYAASEMLDLLIDSDRIDVILENYE--EMCKGLGVYEFVF 212
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRG 184
S ++ +K + F+ + P+I CN +L L I A FD M G
Sbjct: 213 NSFLKRGEVEKGLN-FHRALVE-RGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSG 270
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
+ + F I +C+ +L + S+ + + E ++ VI ++I+G + ++EE
Sbjct: 271 PSPNLVTFSTLINVYCKELRLDEAFSLYNLMI--EKGIVPDLVIYSILINGLFRAGKLEE 328
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
+ R K D + + + + + +G + + V + K G++P Y I
Sbjct: 329 GNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILIN 388
Query: 305 GLIVERRICEA-KELGEVIVSGKFTIDDDVL--NALI-GSVSSIDPRSAIVFFNFMIEKG 360
GL R+ EA G+++ G ++ VL ++LI G S + R + M+ KG
Sbjct: 389 GLCRNGRVLEACGVFGQILKQG---LEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKG 445
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVY-----KVLSANDYF------------------ 397
VP + S L L ++ DE + + + L+ N+Y
Sbjct: 446 HVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGL 505
Query: 398 ------------TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
D+ +Y V+V L GRL EA + ++ +KG PD Y +L++
Sbjct: 506 KMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C++ +++ M ++G ++ YN+LI+ F G +E L L +++ G+ PD
Sbjct: 566 CKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDI 625
Query: 506 TTYTSLLEGLCQETNLQAAFEVF 528
TY +++ G C A ++F
Sbjct: 626 VTYNTMICGYCSLKIFSKAIKLF 648
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 94/178 (52%)
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
FF+ M+ G P L T S L CK + DE +Y ++ D+ Y+++++ L
Sbjct: 262 FFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLF 321
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+G+L E + +G+ DV ++S+M+A R L A +++ +M G S N+
Sbjct: 322 RAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV 381
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
TY+ILI+ G + A +F +L++G+ P TY+SL++G C+ NL+ F ++
Sbjct: 382 TYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYG 439
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 95/493 (19%), Positives = 201/493 (40%), Gaps = 50/493 (10%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y ++ L + ++ +S+ + +D ++ I+ + ++ + KA V+ +
Sbjct: 313 YSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRML 372
Query: 147 FNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC--EN 202
E I P + L+ L +G + A +F ++ +G+E S + + I FC EN
Sbjct: 373 --KEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSEN 430
Query: 203 AKLG----------------QVLSMLDEVRKRENSM----------------INGSVIAV 230
+ G V SML R+ M +N +
Sbjct: 431 LRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNA 490
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
LI G + KR + K+ + + + PD + Y ++ + G + E + + K
Sbjct: 491 LI-DGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKK 549
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI------GSVSSI 344
G +P Y I G +R ++ +++ S D + N LI G V ++
Sbjct: 550 GFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENV 609
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
+ +I+ G P + T + + C + +++++VL + ++
Sbjct: 610 -----LELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFT 664
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
+++ C GR+ +A + M +G +P++ Y+ L++ + + A +L+++M
Sbjct: 665 ILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGD 724
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
S N+ +Y+ILI + G +E A F + + + PD Y L+ G C+ L A
Sbjct: 725 RVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEA 784
Query: 525 FEVFNKSVNHDVM 537
+++ + + +M
Sbjct: 785 MMLYDHMLVNGIM 797
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 99/201 (49%)
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F ++E+G VP + + + K LC N+ + + ++ + ++ +++ +++ C
Sbjct: 227 FHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYC 286
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
RL EA+ + M KG+ PD+ Y+ L+ R L L+ A G ++
Sbjct: 287 KELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVV 346
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
++ ++ + VG++ A+ ++ ML++G++P+ TY+ L+ GLC+ + A VF +
Sbjct: 347 IFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQI 406
Query: 532 VNHDVMLARSILSTFMISLCR 552
+ + + S+ + C+
Sbjct: 407 LKQGLEPSVLTYSSLIDGFCK 427
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 134/334 (40%), Gaps = 71/334 (21%)
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG-SVSSIDPRSA 349
G+ P+ D + + GL + +I A + +++V + + + LI + A
Sbjct: 235 GLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEA 294
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE-------------------------- 383
+N MIEKG VP L S L L + K +E
Sbjct: 295 FSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDA 354
Query: 384 ---------LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
+EVY + ++ +Y+++++ LC +GR+ EA GV ++ ++GL+P
Sbjct: 355 YVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPS 414
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V Y+SL++ C+ + LR L+ M G ++ ++LI+ S G ++ ALR F
Sbjct: 415 VLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFF 474
Query: 495 NMLEKG-----------------------------------VAPDATTYTSLLEGLCQET 519
+++G V PD TYT L++GL ++
Sbjct: 475 QAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQG 534
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
L A +F + + I T + C++
Sbjct: 535 RLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKK 568
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 138/344 (40%), Gaps = 40/344 (11%)
Query: 172 NALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL 231
+ LKM+ M V + + V + E +L + L++ ++ K+ S +I
Sbjct: 503 DGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFS--PDHIIYCT 560
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I GFCK + ++ ++ PD Y ++ F G V +L++ K G
Sbjct: 561 LIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYG 620
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR--SA 349
+ P Y I G + +A +L EV+ G+ + LI + D R A
Sbjct: 621 LEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCK-DGRMDDA 679
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
++ F+ M+E+G P + T S L K ++ E+Y+ + + ++ SY++++
Sbjct: 680 MLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDG 739
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC G + EA Q + L PDV
Sbjct: 740 LCKKGLMEEASLAFQCAIGRHLLPDVI--------------------------------- 766
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
Y ILI + +VG + A+ L+ +ML G+ PD +L E
Sbjct: 767 --AYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAE 808
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 56/130 (43%), Gaps = 5/130 (3%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y+ ++ C +G + A M + G+ + +++ D + + +++M
Sbjct: 143 YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEM- 201
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
C G L Y + + F + GE+E L ++E+G+ P +L+GLC +
Sbjct: 202 ---CKG-LGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIG 257
Query: 523 AAFEVFNKSV 532
A + F+ V
Sbjct: 258 VASDFFDMMV 267
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 193/432 (44%), Gaps = 7/432 (1%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y +I+ + S ++ + ++++++ + I Y ++ ++ +K VF +K
Sbjct: 377 YSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLK 436
Query: 147 FNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
C P I + L+ + G + A+ + EM G++ + + + I F
Sbjct: 437 ECC--FTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHD 494
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
S+ +E+ K + + I L+I FCK ++ A ++L++++ +P A+
Sbjct: 495 FANAFSIFEEMLK--SGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAF 552
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE-LGEVIV 323
R + E F + G + +L R+ G AP Y I GLI + ++ A L ++ +
Sbjct: 553 RPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSI 612
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+G + + G ++ D A +F + E G + L + CK +
Sbjct: 613 AGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQS 672
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ V + +S + YN+++ G + EA ++++MK G+ P++ Y S +
Sbjct: 673 ALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYIN 732
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
ACC+ ++ A+K+ ++M G NLKTY LI +++ + AL+ F M G+ P
Sbjct: 733 ACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKP 792
Query: 504 DATTYTSLLEGL 515
D Y L+ L
Sbjct: 793 DEAAYHCLVTSL 804
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/505 (21%), Positives = 205/505 (40%), Gaps = 78/505 (15%)
Query: 63 HHSLALGFFNWASQ--QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS 120
HH+ A F N ++ +PN + S++ + +++R + + S ++++K I L
Sbjct: 286 HHARAT-FENMRARGIEPN----AFVFTSLVHAYAVARDMRGVLSCVEEMKAEGIELTIV 340
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
Y II + + Q A ++F E K D+ I ++++ G +D A ++ EM
Sbjct: 341 TYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMDRAEELVREM 400
Query: 181 SHRGVEF-----------------------------------STIGFGVFIWKFCENAKL 205
G++ S I +G I + + K+
Sbjct: 401 EEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYIKIGKV 460
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ +++ E+ + + + ++I GF AF + +E+ +PD Y
Sbjct: 461 TKAIAISKEMES--YGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYN 518
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
++ E F MG++ +L+K +K + P +R I G V
Sbjct: 519 LLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAV----------------- 561
Query: 326 KFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
+ D + A+ + M G PT+ T + L L K+N+ + V
Sbjct: 562 -----------------AGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAV 604
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
V +S + +Y +++ +G + +A+ ++K GL DV Y +L+ AC
Sbjct: 605 SVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRAC 664
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+ ++ A + +M + N YNILI ++ G++ A L M E GV P+
Sbjct: 665 CKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNI 724
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNK 530
TYTS + C+ ++Q A +V +
Sbjct: 725 HTYTSYINACCKAGDMQRAQKVIEE 749
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 93/445 (20%), Positives = 176/445 (39%), Gaps = 65/445 (14%)
Query: 80 FTHSPLSYHSILK-SLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
FT S +SY ++ + + + AI ++ K+++ I ++ Y +I I + A
Sbjct: 440 FTPSIISYGCLINLYIKIGKVTKAI-AISKEMESYGIKHNNKTYSMLISGFIHLHDFANA 498
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
FS+F E+ + I N L+ G +D A+++ ++M ++ S F I
Sbjct: 499 FSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEG 558
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDELRI 254
F + + L++LD +R+ +G V+ +IHG K +VE A VL+++ I
Sbjct: 559 FAVAGDMKRALNILDLMRR------SGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSI 612
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
P+ Y I+ + G + + K ++ G+ Y + R+
Sbjct: 613 AGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQS 672
Query: 315 AKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
A + + + K + V N LI G D A M E G P + T
Sbjct: 673 ALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHT------ 726
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
Y ++ C +G ++ A VI+EM GL P
Sbjct: 727 -----------------------------YTSYINACCKAGDMQRAQKVIEEMADVGLKP 757
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
++ Y +L++ + L A K +++M +G + Y+ L++
Sbjct: 758 NLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAYHCLVT--------------- 802
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQE 518
++L + + +TYT +L +C+E
Sbjct: 803 -SLLSRATVMEGSTYTGIL-SICRE 825
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 163/405 (40%), Gaps = 25/405 (6%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR- 218
++ A G +A F+ M RG+E + F + + + VLS ++E++
Sbjct: 275 MIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEG 334
Query: 219 -ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E +++ S+I I GF K + A + E + + + I Y + G++
Sbjct: 335 IELTIVTYSII----IAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNM 390
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILG----------LIVERRICEAKELGEVIVSGKF 327
E ++++ + G+ + Y + G LIV R+ E +I G
Sbjct: 391 DRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCL 450
Query: 328 TIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
L IG V+ AI M G T S L + +
Sbjct: 451 I----NLYIKIGKVTK-----AIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSI 501
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
++ + + D YN+++ C G + A ++++M+++ + P + ++E
Sbjct: 502 FEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAV 561
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
++ A + D M SGC+ + TYN LI + ++E A+ + + M G+ P+ T
Sbjct: 562 AGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHT 621
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
YT ++ G ++ AFE F K + L I T + + C+
Sbjct: 622 YTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCK 666
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 202/440 (45%), Gaps = 23/440 (5%)
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLA--SDGYIDNALKMFDEMS 181
++ SL++ K++ VF+ C+ + P++ A+ A G + +A+ +F +M
Sbjct: 226 LLLSSLVKANELHKSYEVFD---LACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKME 282
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGK 240
GV + + + I ++ + + L D + + S +N SV+ ++I G K +
Sbjct: 283 GLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVR---SKVNPSVVTYGVLISGLMKLE 339
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
EEA +VL E+ P+ + + + + + G + E V + G+ P +
Sbjct: 340 MFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFN 399
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-------GSVSSIDPRSAIVFF 353
+ G ++ +A+++ I+S +++ DV + +I G VS++ + ++
Sbjct: 400 TLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSG 459
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV-YKVLSANDYFTDMESYNVMVSFLCT 412
N + S L+ L LCK E +E+ +K+ + + + N ++ LC
Sbjct: 460 NIRVSD------SLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCE 513
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G + E + V+++M KGL D YN+L+ CC+ + A KL ++M + T
Sbjct: 514 RGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYT 573
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YN L+ +++G+I+ RL H E G P+ TY LLEG C+ ++ A + F
Sbjct: 574 YNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLD 633
Query: 533 NHDVMLARSILSTFMISLCR 552
V L+ + + + + CR
Sbjct: 634 YEKVELSSVVYNILIAAYCR 653
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 201/457 (43%), Gaps = 43/457 (9%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PNF ++++++L+ S Q+ + VL + + ++++ V ++I L++
Sbjct: 392 KPNF----VTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFV 447
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLAS-DGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
A + ++ + + L+ L +G+ + F + +G+ +T+
Sbjct: 448 SALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNAL 507
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
+ CE + +V +L ++ E ++ + +I G CK ++EEAFK+ +E+ +
Sbjct: 508 LHGLCERGNMEEVFEVLKQML--EKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQ 565
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
E +PD Y + + MG + + +L + ++ G P Y + G RI +A
Sbjct: 566 EFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDA 625
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+ + + K + V N LI + I + A + M +G +PT +T
Sbjct: 626 VKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCAT------- 678
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
Y+ ++ +C GR+ EA + +EM+ +GL P+
Sbjct: 679 ----------------------------YSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPN 710
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V Y +L+ C+ + + +M ++G N TY I+I + ++G ++ A L +
Sbjct: 711 VFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLN 770
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
M+ G+APD TY +L +G C+E L + +KS
Sbjct: 771 EMIRNGIAPDTVTYNALQKGYCKERELTVTLQSDHKS 807
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/469 (23%), Positives = 202/469 (43%), Gaps = 35/469 (7%)
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
S++K+ L + D + V + T +++ F +G A +F ++
Sbjct: 230 SLVKANELHKSYEVFDLACQGVAPDVFTFTTAINAFC-----KGGRVGDAVDLFCKM--- 281
Query: 149 CEDIG--PEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
E +G P + N+++ L G + AL+ D M V S + +GV I +
Sbjct: 282 -EGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMK--- 337
Query: 205 LGQVLSMLDEVRKRENSMIN-----GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
L M +E + M + V+ +I G+C+ + EA +V DE+ ++ KP
Sbjct: 338 ----LEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKP 393
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR-ICEAKEL 318
+F+ + + + F + + E VL G++ D +++ ++ER A ++
Sbjct: 394 NFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNM-DVCSYVIHRLMERSGFVSALKI 452
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV--FFNFMIEKGRVPTLSTLSNLSKNLC 376
++SG + D +L L+ + + S + +F KG T + L LC
Sbjct: 453 VTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLC 512
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+R +E+ EV K + D SYN ++ C G++ EA+ + +EM ++ PD
Sbjct: 513 ERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTY 572
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN LM+ + +L + G N+ TY +L+ + + IE A++ F N+
Sbjct: 573 TYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNL 632
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
+ V + Y L+ C+ N+ AF++ D M +R IL T
Sbjct: 633 DYEKVELSSVVYNILIAAYCRIGNVTEAFKL------RDAMKSRGILPT 675
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 196/448 (43%), Gaps = 41/448 (9%)
Query: 129 LIQGKNTQKAFSVFNEVKFNCEDIG--PE--ICNSLLAVLASDGYIDNALKMFDEMSHRG 184
LI G + F NEV +G P + N+L+ G + AL++ DEM+ +G
Sbjct: 331 LISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKG 390
Query: 185 VEFSTIGFGVFIWKFCENAKLGQV--------------------------------LSML 212
++ + + F + FC + ++ Q +S L
Sbjct: 391 MKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSAL 450
Query: 213 DEVRK--RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR-IRECKPDFIAYRIVAE 269
V K N ++ S++ L++ G CK + EA ++ +L ++ + + +
Sbjct: 451 KIVTKLLSGNIRVSDSLLTPLVV-GLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLH 509
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
G++ E VLK+ + G+ Y I G +I EA +L E +V +F
Sbjct: 510 GLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQP 569
Query: 330 DDDVLNALIGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
D N L+ ++ + + + E G VP + T + L + CK ++ ++ V+ +
Sbjct: 570 DTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFF 629
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
K L YN++++ C G + EA+ + MK +G+ P + Y+SL+ C
Sbjct: 630 KNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCI 689
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
+ AK+++++M G N+ Y LI ++G+++ + M G+ P+ TY
Sbjct: 690 GRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITY 749
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDV 536
T +++G C+ N++ A E+ N+ + + +
Sbjct: 750 TIMIDGYCKLGNMKEARELLNEMIRNGI 777
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 143/385 (37%), Gaps = 71/385 (18%)
Query: 64 HSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
HS A+ + + + ++ +++L L + + VLKQ+ + LD Y
Sbjct: 481 HSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYN 540
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR 183
+I F C G I+ A K+ +EM +
Sbjct: 541 TLI--------------------FGC---------------CKWGKIEEAFKLKEEMVQQ 565
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
+ T + + + K+ V +L E +E + L++ G+CK R+E
Sbjct: 566 EFQPDTYTYNFLMKGLADMGKIDDVHRLLHEA--KEYGFVPNVYTYALLLEGYCKADRIE 623
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
+A K L + + + Y I+ + +G+V E + + G+ P Y I
Sbjct: 624 DAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLI 683
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVP 363
G+ R+ EAKE+ F M +G +P
Sbjct: 684 HGMCCIGRVDEAKEI----------------------------------FEEMRNEGLLP 709
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ + L CK + D + + +S+N + +Y +M+ C G ++EA ++
Sbjct: 710 NVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELL 769
Query: 424 QEMKRKGLDPDVSFYNSLMEACCRE 448
EM R G+ PD YN+L + C+E
Sbjct: 770 NEMIRNGIAPDTVTYNALQKGYCKE 794
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 1/168 (0%)
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
+++ + S F +++ N+++S L + L ++Y V ++ +G+ PDV + + + A
Sbjct: 207 DIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVF-DLACQGVAPDVFTFTTAINAF 265
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+ + A L+ +M G N+ TYN +I + G E ALR M+ V P
Sbjct: 266 CKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSV 325
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
TY L+ GL + + A EV + + + + + CR+
Sbjct: 326 VTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRK 373
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 166/373 (44%), Gaps = 6/373 (1%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL V+A D + + D + GV + + FC++++ S L ++ K
Sbjct: 78 LLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKL- 136
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
V +I+GFC G R+EEA +++++ KPD + Y + + G V
Sbjct: 137 -GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNY 195
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+ + G+ P Y + GL R +A L + K D NALI
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 340 S-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
+ V A +N MI P + T ++L C DE +++ ++ F
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D+ +Y +++ C ++ +A + EM +KGL + Y +L++ + A++++
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK---GVAPDATTYTSLLEGL 515
M + G N++TYN+L+ G+++ AL +F +M ++ GVAP+ TY LL GL
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGL 435
Query: 516 CQETNLQAAFEVF 528
C L+ A VF
Sbjct: 436 CYNGKLEKALMVF 448
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 174/366 (47%), Gaps = 8/366 (2%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
++ A+ M ++M G++ + + I C+N + LS+ D++ EN I V+
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM---ENYGIRPDVVM 214
Query: 230 VL-IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+++G C R +A +L + R+ KPD I + + + F G + E + +
Sbjct: 215 YTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPR 347
++ +AP Y I G +E + EA+++ ++ + D +LI G
Sbjct: 275 RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVD 334
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A+ F M +KG T + L + + K + EV+ + + ++ +YNV++
Sbjct: 335 DAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLD---PDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
LC +G++++A + ++M+++ +D P++ YN L+ C L A +++ M
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
+ TY I+I + G+++ A+ LF ++ KGV P+ TYT+++ GL +E A
Sbjct: 455 EMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEA 514
Query: 525 FEVFNK 530
+F K
Sbjct: 515 HVLFRK 520
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 131/300 (43%), Gaps = 1/300 (0%)
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K K+ + + D L+I D ++ F + L K KLG P
Sbjct: 84 KMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIV 143
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFM 356
+ I G + R+ EA + +V D + +I S+ + A+ F+ M
Sbjct: 144 TFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM 203
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
G P + ++L LC + + + + ++ D+ ++N ++ G+
Sbjct: 204 ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKF 263
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
+A + EM R + P++ Y SL+ C E + A++++ M GC ++ Y L
Sbjct: 264 LDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSL 323
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I+ F + +++ A+++F+ M +KG+ + TYT+L++G Q A EVF+ V+ V
Sbjct: 324 INGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGV 383
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 6/217 (2%)
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
S P A F M++ G P + T ++L C N+ +E + + + D+
Sbjct: 119 QSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVV 178
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
Y ++ LC +G + A + +M+ G+ PDV Y SL+ C R A L M
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
++ T+N LI F + G+ A L++ M+ +AP+ TYTSL+ G C E +
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298
Query: 522 QAAFEVF----NKSVNHDVMLARSILSTFMISLCRRV 554
A ++F K DV+ S+++ F C++V
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGF--CKCKKV 333
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 95/212 (44%), Gaps = 4/212 (1%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ S+ A+ F M+E +P++ + L + K K D ++ + L D
Sbjct: 47 GLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHD 106
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ + N++++ C S + A + +M + G +PD+ + SL+ C + + A + +
Sbjct: 107 LYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVN 166
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
QM G ++ Y +I + G + AL LF M G+ PD YTSL+ GLC
Sbjct: 167 QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Query: 520 NLQAAFEVF----NKSVNHDVMLARSILSTFM 547
+ A + + + DV+ +++ F+
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 58/138 (42%)
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ EA + M P + + L+ + L D + G S +L T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
+L++ F + + A M++ G PD T+TSL+ G C ++ A + N+ V
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 535 DVMLARSILSTFMISLCR 552
+ + +T + SLC+
Sbjct: 172 GIKPDVVMYTTIIDSLCK 189
>gi|302801478|ref|XP_002982495.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
gi|300149594|gb|EFJ16248.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
Length = 448
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 168/373 (45%), Gaps = 21/373 (5%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D A M M G + + G+ + KFCE ++G+V + E+ NG +
Sbjct: 26 VDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVCELFQELES------NGVAVG 79
Query: 230 VLIIHG-----FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+L + C G + FK D P +AY+ + + G E V+
Sbjct: 80 MLAYNAILKALMCSGD-FDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIKTGKTREASEVV 138
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS---V 341
+ K V P Y I L R +A ++ +++V + + DV +L+ +
Sbjct: 139 GEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNLDVYTSLLAAHCRT 197
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+D A F MI++G P+ ST L + LC +S +++ + + + D
Sbjct: 198 RKLD--GAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDEN 255
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEM--KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+Y ++ C +GR+ EA + +E+ K L D YN L+E CR + A ++
Sbjct: 256 TYASLIYGCCMAGRITEAKVLFKEVLEGEKAL-LDAGIYNVLIEGLCRASKVEEALEVTA 314
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
M GC L+TYN LI F + E++ AL+LF M EKG +P+ Y++ ++GLC+
Sbjct: 315 GMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNTMIYSTFIDGLCKVG 374
Query: 520 NLQAAFEVFNKSV 532
+ A E F +SV
Sbjct: 375 KINEAHEFFQQSV 387
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/438 (19%), Positives = 176/438 (40%), Gaps = 29/438 (6%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY+ +++ L+ ++ ++L + D ++ + K + +F E+
Sbjct: 12 SYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVCELFQEL 71
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ N +G N++L L G D K D G + + + + K
Sbjct: 72 ESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIKTGKT 131
Query: 206 GQVLSMLDEVRKRE--NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ ++ E+ K+ + M ++I+VL CK R ++A KV D + +E P+
Sbjct: 132 REASEVVGEMIKKSVPDGMTYTALISVL-----CKHNRADDAMKVFDIMVEKEIVPNLDV 186
Query: 264 Y----------RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
Y R + ++L + +R G P + Y + L R
Sbjct: 187 YTSLLAAHCRTRKLDGAYRLFVEMIQR----------GYGPSASTYGLLLRCLCNGGRSY 236
Query: 314 EAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN-L 371
A ++ + S D++ +LI G + A V F ++E + + + N L
Sbjct: 237 LAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVL 296
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
+ LC+ +K +E +EV + +++YN ++ + + +A + + M+ KG
Sbjct: 297 IEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGF 356
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
P+ Y++ ++ C+ + A + + Q GC + TYN LI ++ A R
Sbjct: 357 SPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHR 416
Query: 492 LFHNMLEKGVAPDATTYT 509
L+ M E+G D + T
Sbjct: 417 LYREMGERGYIADRSLRT 434
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 6/225 (2%)
Query: 330 DDDVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
D D N L+ +SS+D A++ + M+ +G P + T L C+ + E+ E
Sbjct: 9 DRDSYNLLVRGLTKLSSVDQARAML--STMVGEGYDPDVVTCGLLVDKFCEMKRVGEVCE 66
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
+++ L +N M +YN ++ L SG + G P V Y ++++
Sbjct: 67 LFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLI 126
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ R A ++ +M + TY LIS + + A+++F M+EK + P+
Sbjct: 127 KTGKTREASEVVGEMIKKSVPDGM-TYTALISVLCKHNRADDAMKVFDIMVEKEIVPNLD 185
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
YTSLL C+ L A+ +F + + + S + LC
Sbjct: 186 VYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLC 230
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 1/197 (0%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M+E G VP + + L + L K + D+ + + Y D+ + ++V C R
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ E + QE++ G+ + YN++++A K D G ++ Y
Sbjct: 61 VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
++ + G+ A + M++K V PD TYT+L+ LC+ A +VF+ V +
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKE 179
Query: 536 VMLARSILSTFMISLCR 552
++ + ++ + + CR
Sbjct: 180 IVPNLDVYTSLLAAHCR 196
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 156/346 (45%), Gaps = 36/346 (10%)
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
V+ + + I CE ++ LS+LD++ R V +++ CKG+ +
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCR--GCAPDVVTYNILLEATCKGRGYRQ 60
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A +++D +R C P+ + Y ++ + G V + +L+ G P T +Y +
Sbjct: 61 AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 120
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT 364
GL R +A EL M+ + P
Sbjct: 121 GLCSAERWGDADEL----------------------------------VTEMLRENCPPN 146
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
+T + + +LC++ + +++ + +S + ++ +YN +++ LC + A G++
Sbjct: 147 EATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLS 206
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
+MK G PD+ YN+L++ C A++L D M +GC + T+N LI + G
Sbjct: 207 KMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKG 266
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ A+ +F M +KG P++ TY++++ GL + T L A E+FN+
Sbjct: 267 LMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNE 312
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/475 (22%), Positives = 199/475 (41%), Gaps = 47/475 (9%)
Query: 77 QPN-FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
QPN +T++PL + +L Q+ SVL + D Y ++ + +G+
Sbjct: 4 QPNAYTYNPL-----IHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGY 58
Query: 136 QKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
++A + + ++ E P N L+ + +G +D+AL++ + G + ST+ +
Sbjct: 59 RQAMELIDLMRA--EGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYN 116
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
+ C + G ++ E+ REN N + V +I+ C+ +++A ++L+++
Sbjct: 117 TVLKGLCSAERWGDADELVTEML-RENCPPNEATFNV-VIYSLCRKGLLQQAIQLLEKMS 174
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
C + + Y + +V +L K + G P Y + GL R
Sbjct: 175 KHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWV 234
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+A+EL + M + G +P T + L
Sbjct: 235 DAEEL----------------------------------MDNMTQNGCLPDNVTFNTLIG 260
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
LC++ + +EV+K + + +Y+ ++S L + +L +A + EM KG +P
Sbjct: 261 FLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNP 320
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
D Y L E +D + A + ++ SG S + YN ++ G+ E A+ +
Sbjct: 321 D-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIM 379
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
M+ G PD TY L+EGL E L A E+ K + DV++ I S ++
Sbjct: 380 AYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSLIKSEALL 434
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 106/210 (50%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
R A+ + M +G P T + L +C D+ +E+ + L ++ +YN +
Sbjct: 59 RQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTV 118
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC++ R +A ++ EM R+ P+ + +N ++ + CR+ LL+ A +L ++M GC
Sbjct: 119 LKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGC 178
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ N+ TYN +I+ E ++GA+ L M G PD TY +LL+GLC A E
Sbjct: 179 TANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEE 238
Query: 527 VFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+ + + + +T + LC++ L+
Sbjct: 239 LMDNMTQNGCLPDNVTFNTLIGFLCQKGLM 268
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 82/155 (52%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN ++ LC G++R+A V+ +M +G PDV YN L+EA C+ R A +L D M
Sbjct: 9 TYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLM 68
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
A GC+ N TYN+L+ G+++ AL L N+ G P Y ++L+GLC
Sbjct: 69 RAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERW 128
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
A E+ + + + + + + SLCR+ L+
Sbjct: 129 GDADELVTEMLRENCPPNEATFNVVIYSLCRKGLL 163
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 97/205 (47%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
R A+ + M+ +G P + T + L + CK + +E+ ++ A + +YNV+
Sbjct: 24 RDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVL 83
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ +C G + +A +++ + G P YN++++ C + A +L +M C
Sbjct: 84 MDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENC 143
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
N T+N++I G ++ A++L M + G + TY +++ GLC++ N+ A
Sbjct: 144 PPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMG 203
Query: 527 VFNKSVNHDVMLARSILSTFMISLC 551
+ +K ++ +T + LC
Sbjct: 204 LLSKMKSYGCKPDIVTYNTLLKGLC 228
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P+ YN L+ C +R A + D M GC+ ++ TYNIL+ + A+ L
Sbjct: 5 PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
M +G P+ TY L++G+C E ++ A E+ +H + +T + LC
Sbjct: 65 IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLC 123
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 74/176 (42%), Gaps = 10/176 (5%)
Query: 100 INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS 159
++AI+ V KQ+ T +S Y II L + +A +FNE+ + P+
Sbjct: 269 VDAIE-VFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGH--KGFNPDKIYQ 325
Query: 160 LLA-VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
LLA L D I+ A++ ++ G+ T+ + + C N K + ++
Sbjct: 326 LLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIM--AYMV 383
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+ + + V++I G + EA EL I+ C D + ++ E L+
Sbjct: 384 SSGCMPDDLTYVILIEGLAYEGYLNEA----RELLIKLCSRDVLVNSLIKSEALLL 435
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 172/398 (43%), Gaps = 37/398 (9%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
C ++ G N +F MS G + + + +I CE + Q +L+E+
Sbjct: 219 CTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMV 278
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RIRECKPDFIAYRIVAEEFKLMG 275
+ + +I G CK +E AF++ +L + KP+ Y ++ + G
Sbjct: 279 GK--GLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEG 336
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ E++L + + G+AP TN Y I G C+ G F
Sbjct: 337 KLARAEMLLGRMVEQGLAPNTNTYTTLIHGH------CKG---------GSFD------- 374
Query: 336 ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
A N M +G +P + T + + CK+ K E +V ++ ++
Sbjct: 375 ------------RAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQG 422
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D +Y ++++ C G + A + ++M K PD+ Y +++ C++ + ++
Sbjct: 423 LHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQ 482
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L+D+ + G +TY +I+ + +G++ AL++F M++ G PD+ TY +L+ L
Sbjct: 483 QLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSL 542
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
C+E+ L+ A +F ++ ++ T CRR
Sbjct: 543 CKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRR 580
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 160/390 (41%), Gaps = 43/390 (11%)
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN--SMIN 224
+G + A + M +G + V + FC + V + + + +M+N
Sbjct: 194 EGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVN 253
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER--EV 282
S I G C+ V++AF VL+E+ + KP+ + + + +G + ER +
Sbjct: 254 YSAW----IDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWM-ERAFRL 308
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
LK + P + Y I G E ++ A+ L
Sbjct: 309 FLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEML------------------------ 344
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
M+E+G P +T + L CK D E+ + + ++ +
Sbjct: 345 ----------LGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYT 394
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN ++ C G+++EAY V++ +GL D Y L+ C++ + A L+ QM
Sbjct: 395 YNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMA 454
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
C ++ TY +I+ + + ++E + +LF L G+ P TYTS++ G C+ L
Sbjct: 455 EKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLT 514
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+A +VF + V H + + SLC+
Sbjct: 515 SALKVFERMVQHGCLPDSITYGALISSLCK 544
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 167/406 (41%), Gaps = 12/406 (2%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDE 179
Y I L + ++AF V E+ + + P + SL+ L G+++ A ++F +
Sbjct: 254 YSAWIDGLCERGYVKQAFHVLEEMVG--KGLKPNVYTHTSLIDGLCKIGWMERAFRLFLK 311
Query: 180 M-SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
+ + + + V I +C+ KL + +L R E + + +IHG CK
Sbjct: 312 LVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLG--RMVEQGLAPNTNTYTTLIHGHCK 369
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
G + AF++++++++ P+ Y + F G + E VL+ G+
Sbjct: 370 GGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVT 429
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG-SVSSIDPRSAIVFFNFMI 357
Y I + I A +L + + D +I + F+ +
Sbjct: 430 YTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCL 489
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
G VPT T +++ C+ K ++V++ + + D +Y ++S LC RL
Sbjct: 490 SIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLE 549
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
EA + + M K L P +L CR D + A D++ T + L+
Sbjct: 550 EARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKRQ---QAHTADALV 606
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
K S VG ++ A N+L+K A D TYTS + C E+N A
Sbjct: 607 RKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFINS-CYESNRYA 651
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 67/178 (37%), Gaps = 38/178 (21%)
Query: 413 SGRLREAYGVIQEMKRKGLD--------------------------------------PD 434
+GRLREA ++ E++ GL PD
Sbjct: 121 AGRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPD 180
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+ +L+ CCRE A L M+A G + T +++ F G LF
Sbjct: 181 HRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFR 240
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M E G P+ Y++ ++GLC+ ++ AF V + V + ++ + LC+
Sbjct: 241 RMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCK 298
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 182/401 (45%), Gaps = 23/401 (5%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N ++A L G +ALK+FDEM GV + I + I + L + D++
Sbjct: 198 NVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQML- 256
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE------EF 271
+ V +++ G C+ R++E ++DE+ PD Y I+ + E
Sbjct: 257 -HDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGES 315
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL--GLIVERRICEAKELGEVIVSGKFTI 329
+ M S+F LKK LG Y IL GL + ++ +AK++ E++V
Sbjct: 316 QTMLSLFAES--LKKGVMLGA------YTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVP 367
Query: 330 DDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
+ N LI + D R A F M + P T + L LCK + ++
Sbjct: 368 TTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLV 427
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+ + +E++N ++ T+G+L + + V+ +M++KG+ DV + S+++A C+
Sbjct: 428 MEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKN 487
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
+ A + D M + N + YN +I + E G+ E AL L M GV+ TY
Sbjct: 488 GKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTY 547
Query: 509 TSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSILST 545
LL+GLC+ + + A E+ N+ + DV+ +I+S
Sbjct: 548 NLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISA 588
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/431 (20%), Positives = 185/431 (42%), Gaps = 7/431 (1%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PN ++Y+ +L L + +++ +++ ++ + + D Y + L + +Q
Sbjct: 261 KPNV----VTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQ 316
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
S+F E +G C+ LL L DG + A ++F+ + H G+ +T+ + I
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLI 376
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
+C+ L + ++++ R + + +I+G CK + V +A ++ E+
Sbjct: 377 NGYCQVRDLRGAFCIFEQMKSRH--IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 434
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
P + + + + G + + VL ++ G+ + + +I EA
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 494
Query: 317 ELGEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ + ++ + V N++I + + S D A++ M G ++ T + L K L
Sbjct: 495 AILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGL 554
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C+ ++ DE E+ L D+ SYN ++S C G +A ++QEM + G+ P +
Sbjct: 555 CRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTL 614
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
++L+ A + + L+ QM + Y I++ + L
Sbjct: 615 RTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKE 674
Query: 496 MLEKGVAPDAT 506
M EKG+A D T
Sbjct: 675 MSEKGIAFDDT 685
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 163/382 (42%), Gaps = 3/382 (0%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN LL L G + F + G T + + L L+ML +
Sbjct: 125 CNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMG 184
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+ E + + ++I G + + +A KV DE+ P+ I Y + + + G
Sbjct: 185 RSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH-VKGG 243
Query: 277 VFEREVVLKKKR-KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E L+ + G P Y + GL R+ E + L + + S D +
Sbjct: 244 DLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYS 303
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
L G + + ++ + F ++KG + T S L LCK K + +V+++L
Sbjct: 304 ILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHT 363
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
YN +++ C LR A+ + ++MK + + PD YN+L+ C+ +++ A
Sbjct: 364 GLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKA 423
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+ L +M SG +++T+N LI + G++E + +M +KG+ D ++ S+++
Sbjct: 424 EDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKA 483
Query: 515 LCQETNLQAAFEVFNKSVNHDV 536
C+ + A + + + DV
Sbjct: 484 FCKNGKIPEAVAILDDMIYKDV 505
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D SYNV+++ L SG+ +A V EM G+ P+ YN++++ + L +L
Sbjct: 193 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLR 252
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
DQM G N+ TYN+L+S G ++ L M + PD TY+ L +GL +
Sbjct: 253 DQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRT 312
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
Q +F +S+ VML S + LC+
Sbjct: 313 GESQTMLSLFAESLKKGVMLGAYTCSILLNGLCK 346
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN M+ G L + + +M G P+V YN L+ CR + + L D+M
Sbjct: 231 TYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEM 290
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ + TY+IL + GE + L LF L+KGV A T + LL GLC++ +
Sbjct: 291 ASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKV 350
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A +VF V+ ++ I +T + C+
Sbjct: 351 AKAKQVFEMLVHTGLVPTTVIYNTLINGYCQ 381
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 91/204 (44%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F+ M++ G P T + + K + + + + ++ +YNV++S
Sbjct: 213 ALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLS 272
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC +GR+ E ++ EM + PD Y+ L + R + L+ + G
Sbjct: 273 GLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVML 332
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
T +IL++ + G++ A ++F ++ G+ P Y +L+ G CQ +L+ AF +F
Sbjct: 333 GAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 392
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
+ + + + + LC+
Sbjct: 393 EQMKSRHIRPDHITYNALINGLCK 416
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 400 MESYNVMVSFLCTSGR---LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ S N+++ L GR +R A+G++ G PD +N +++AC L A
Sbjct: 122 LSSCNLLLESLLFVGRHADVRAAFGLLVA---AGARPDTFAWNKVVQACVAAGDLDVALA 178
Query: 457 LWDQMFAS--GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+ +M S + +YN++I+ G+ AL++F M++ GVAP+ TY ++++G
Sbjct: 179 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDG 238
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS-LCR 552
+ +L+A F + ++ + HD + ++S LCR
Sbjct: 239 HVKGGDLEAGFRLRDQML-HDGPKPNVVTYNVLLSGLCR 276
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 200/483 (41%), Gaps = 49/483 (10%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S ++Y I+ S + A D + K TL++S+Y II + Q N ++A ++
Sbjct: 378 SLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALV 437
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYI-----DNALKMFDEMSHRGVEFSTIGFGVFIW 197
E++ D I ++++ DGY L +F + G + + +G I
Sbjct: 438 REMEEEGIDAPIAIYHTMM-----DGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLIN 492
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
+ + K+ + L + V K E N + ++I+GF K K AF V +++
Sbjct: 493 LYTKVGKISKALE-VSRVMKEEGVKHNLKTYS-MMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL--------------------------- 290
KPD I Y + F MG++ +K+ +KL
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Query: 291 --------GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
G P + + I GL+ +R+ E L E+ ++G + + G S
Sbjct: 611 VFDMMRRCGCVPTVHTFNGLINGLVEKRQAVEI--LDEMTLAGVSANEHTYTKIMQGYAS 668
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
D A +F + +G + T L K CK + + V K +SA + +
Sbjct: 669 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 728
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN+++ G + EA +IQ+MK++G+ PD+ Y S + AC + + A + ++M
Sbjct: 729 YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME 788
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
A G N+KTY LI ++ E AL + M G+ PD Y LL L ++
Sbjct: 789 ALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIA 848
Query: 523 AAF 525
A+
Sbjct: 849 EAY 851
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 155/373 (41%), Gaps = 6/373 (1%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
I SL+ A +D AL +M G+E S + + V + F + DE
Sbjct: 346 IYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEA 405
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
KR + +N S+ II+ C+ +E A ++ E+ Y + + + ++
Sbjct: 406 -KRIHKTLNASIYG-KIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVA 463
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ VV K+ ++ G P Y I +I +A E+ V+ + +
Sbjct: 464 DEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYS 523
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I G V D +A F M+++G P + +N+ C D ++ K +
Sbjct: 524 MMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL 583
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ ++ ++ SG +R + V M+R G P V +N L+ + R A
Sbjct: 584 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEK---RQA 640
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++ D+M +G S N TY ++ ++ VG+ A F + +G+ D TY +LL+
Sbjct: 641 VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKA 700
Query: 515 LCQETNLQAAFEV 527
C+ +Q+A V
Sbjct: 701 CCKSGRMQSALAV 713
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/395 (18%), Positives = 158/395 (40%), Gaps = 51/395 (12%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
FG+ + + + + + +R R + S I +IH + G+ ++EA + +
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRAR--GITPTSRIYTSLIHAYAVGRDMDEALSCVRK 369
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI---- 307
++ + + Y ++ F G + + +++ + Y + I
Sbjct: 370 MKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCN 429
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
+ER +E+ E + I +++ G D + +V F + E G PT+ T
Sbjct: 430 MERAEALVREMEEEGIDAPIAIYHTMMD---GYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
L K K + +EV +V+ ++++Y++M++ A+ V ++M
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 428 RKGLDPDVSFYNSLMEACC-----------------------------------REDLLR 452
++G+ PDV YN+++ A C + +R
Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 606
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
+ +++D M GC + T+N LI+ E + A+ + M GV+ + TYT ++
Sbjct: 607 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQ---AVEILDEMTLAGVSANEHTYTKIM 663
Query: 513 EGLCQETNLQAAFEVF----NKSVNHDVMLARSIL 543
+G + AFE F N+ ++ D+ ++L
Sbjct: 664 QGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 698
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/447 (21%), Positives = 201/447 (44%), Gaps = 11/447 (2%)
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNAL 174
I D +Y +I L + ++ S+F+ + I +S++ G + A+
Sbjct: 306 IVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAI 365
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR--ENSMINGSVIAVLI 232
+++ M G+ + + + + I C N ++ + + ++ K+ E S++ S +
Sbjct: 366 EVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSL---- 421
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I GFCK + + + F + + + PD + ++ G + E + K G+
Sbjct: 422 IDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGL 481
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---GSVSSIDPRSA 349
+ I G +R + ++ I+ G + + DV+ + G A
Sbjct: 482 TLNNYLFNALIDGCFRLKRTRDGLKM--YILMGMYKVIPDVVTYTVLVKGLAEQGRLDEA 539
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ F +++KG P L CK+ ++++K++ +N F D+ YNV+++
Sbjct: 540 LALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINM 599
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
G + +++E+ + GL+PD+ YN+++ C + A KL++ + N
Sbjct: 600 FFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPN 659
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
T+ ILI + + G ++ A+ +F +MLE+G P+ TY+ L++G + N ++AFE++
Sbjct: 660 AITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYE 719
Query: 530 KSVNHDVMLARSILSTFMISLCRRVLI 556
K + V S + LC++ L+
Sbjct: 720 KMLGDRVSPNIVSYSILIDGLCKKGLM 746
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 114/503 (22%), Positives = 215/503 (42%), Gaps = 54/503 (10%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A+ F W S+ +S+++ + L L + ID +L+ + ++ VY F+
Sbjct: 159 AVDTFAWMSKM----GVSISHYAASEMLDLLIDSDRIDVILENYE--EMCKGLGVYEFVF 212
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRG 184
S ++ +K + F+ + P+I CN +L L I A FD M G
Sbjct: 213 NSFLKRGEVEKGLN-FHRALVE-RGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSG 270
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
+ + F I +C+ +L + S+ + + E ++ VI ++I+G + ++EE
Sbjct: 271 PSPNLVTFSTLINVYCKELRLDEAFSLYNLMI--EKGIVPDLVIYSILINGLFRAGKLEE 328
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
+ R K D + + + + + +G + + V + K G++P Y I
Sbjct: 329 GNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILIN 388
Query: 305 GLIVERRICEA-KELGEVIVSGKFTIDDDVL--NALI-GSVSSIDPRSAIVFFNFMIEKG 360
GL R+ EA G+++ G ++ VL ++LI G S + R + M+ KG
Sbjct: 389 GLCRNGRVLEACGVFGQILKQG---LEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKG 445
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVY-----KVLSANDYF------------------ 397
VP + S L L ++ DE + + + L+ N+Y
Sbjct: 446 HVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGL 505
Query: 398 ------------TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
D+ +Y V+V L GRL EA + ++ +KG PD Y +L++
Sbjct: 506 KMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C++ +++ M ++G ++ YN+LI+ F G +E L L +++ G+ PD
Sbjct: 566 CKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDI 625
Query: 506 TTYTSLLEGLCQETNLQAAFEVF 528
TY +++ G C A ++F
Sbjct: 626 VTYNTMICGYCSLKIFSKAIKLF 648
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 94/178 (52%)
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
FF+ M+ G P L T S L CK + DE +Y ++ D+ Y+++++ L
Sbjct: 262 FFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLF 321
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+G+L E + +G+ DV ++S+M+A R L A +++ +M G S N+
Sbjct: 322 RAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV 381
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
TY+ILI+ G + A +F +L++G+ P TY+SL++G C+ NL+ F ++
Sbjct: 382 TYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYG 439
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/493 (19%), Positives = 201/493 (40%), Gaps = 50/493 (10%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y ++ L + ++ +S+ + +D ++ I+ + ++ + KA V+ +
Sbjct: 313 YSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVY--TR 370
Query: 147 FNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC--EN 202
E I P + L+ L +G + A +F ++ +G+E S + + I FC EN
Sbjct: 371 MLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSEN 430
Query: 203 AKLG----------------QVLSMLDEVRKRENSM----------------INGSVIAV 230
+ G V SML R+ M +N +
Sbjct: 431 LRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNA 490
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
LI G + KR + K+ + + + PD + Y ++ + G + E + + K
Sbjct: 491 LI-DGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKK 549
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI------GSVSSI 344
G +P Y I G +R ++ +++ S D + N LI G V ++
Sbjct: 550 GFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENV 609
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
+ +I+ G P + T + + C + +++++VL + ++
Sbjct: 610 -----LELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFT 664
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
+++ C GR+ +A + M +G +P++ Y+ L++ + + A +L+++M
Sbjct: 665 ILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGD 724
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
S N+ +Y+ILI + G +E A F + + + PD Y L+ G C+ L A
Sbjct: 725 RVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEA 784
Query: 525 FEVFNKSVNHDVM 537
+++ + + +M
Sbjct: 785 MMLYDHMLVNGIM 797
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 99/201 (49%)
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F ++E+G VP + + + K LC N+ + + ++ + ++ +++ +++ C
Sbjct: 227 FHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYC 286
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
RL EA+ + M KG+ PD+ Y+ L+ R L L+ A G ++
Sbjct: 287 KELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVV 346
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
++ ++ + VG++ A+ ++ ML++G++P+ TY+ L+ GLC+ + A VF +
Sbjct: 347 IFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQI 406
Query: 532 VNHDVMLARSILSTFMISLCR 552
+ + + S+ + C+
Sbjct: 407 LKQGLEPSVLTYSSLIDGFCK 427
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 145/362 (40%), Gaps = 40/362 (11%)
Query: 172 NALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL 231
+ LKM+ M V + + V + E +L + L++ ++ K+ S +I
Sbjct: 503 DGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFS--PDHIIYCT 560
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I GFCK + ++ ++ PD Y ++ F G V +L++ K G
Sbjct: 561 LIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYG 620
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR--SA 349
+ P Y I G + +A +L EV+ G+ + LI + D R A
Sbjct: 621 LEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCK-DGRMDDA 679
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
++ F+ M+E+G P + T S L K ++ E+Y+ + + ++ SY++++
Sbjct: 680 MLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDG 739
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC G + EA Q + L PDV
Sbjct: 740 LCKKGLMEEASLAFQCAIGRHLLPDVI--------------------------------- 766
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
Y ILI + +VG + A+ L+ +ML G+ PD +L E Q++ VF
Sbjct: 767 --AYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQDSQASIYSTVFP 824
Query: 530 KS 531
+S
Sbjct: 825 ES 826
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 134/334 (40%), Gaps = 71/334 (21%)
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG-SVSSIDPRSA 349
G+ P+ D + + GL + +I A + +++V + + + LI + A
Sbjct: 235 GLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEA 294
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE-------------------------- 383
+N MIEKG VP L S L L + K +E
Sbjct: 295 FSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDA 354
Query: 384 ---------LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
+EVY + ++ +Y+++++ LC +GR+ EA GV ++ ++GL+P
Sbjct: 355 YVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPS 414
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V Y+SL++ C+ + LR L+ M G ++ ++LI+ S G ++ ALR F
Sbjct: 415 VLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFF 474
Query: 495 NMLEKG-----------------------------------VAPDATTYTSLLEGLCQET 519
+++G V PD TYT L++GL ++
Sbjct: 475 QAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQG 534
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
L A +F + + I T + C++
Sbjct: 535 RLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKK 568
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/152 (19%), Positives = 62/152 (40%), Gaps = 5/152 (3%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y+ ++ C +G + A M + G+ + +++ D + + +++M
Sbjct: 143 YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEM- 201
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
C G L Y + + F + GE+E L ++E+G+ P +L+GLC +
Sbjct: 202 ---CKG-LGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIG 257
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCRRV 554
A + F+ V ST + C+ +
Sbjct: 258 VASDFFDMMVRSGPSPNLVTFSTLINVYCKEL 289
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/480 (21%), Positives = 203/480 (42%), Gaps = 17/480 (3%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
LAL FF + + ++ H + R A+D +L + D Y +
Sbjct: 131 LALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNIL 190
Query: 126 IPSLI-QGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSH 182
+ SL QGK+ Q A + + P++ N+++ +G ++ A +F EM
Sbjct: 191 LKSLCNQGKSGQ-ADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 249
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-----IIHGFC 237
RG+ + + + C+ + + + L + M+N V+ +I+G+
Sbjct: 250 RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQ-------MVNKGVLPDNWTYNNLIYGYS 302
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
+ +EA +V E+R + PD +A + G + E V G P
Sbjct: 303 STGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 362
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFM 356
Y + G + + + +L ++++ D N LI + ++ A++ FN M
Sbjct: 363 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM 422
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
+ G P + T + LC+ K D+ +E + + D +Y+ ++ CT G L
Sbjct: 423 RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSL 482
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
+A +I E+ G+ D+ F+ S++ C+ + A+ ++D G + YN+L
Sbjct: 483 LKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNML 542
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+ + VG++E ALR+F M+ G+ P+ Y +L+ G C+ + +F + + +
Sbjct: 543 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGI 602
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 154/334 (46%), Gaps = 12/334 (3%)
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRE--CKPDFIAYRIVAEEFKLMGSVFEREVV 283
++IA ++ GFC+ KR +EA +L R E C PD +Y I+ + G + + +
Sbjct: 148 AIIASHLLKGFCEAKRTDEALDILLH-RTPELGCVPDVFSYNILLKSLCNQGKSGQADDL 206
Query: 284 LKKKRKLGV--APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID----DDVLNAL 337
L+ + G +P Y I G E + +A +L + +V D V++AL
Sbjct: 207 LRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHAL 266
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
++D A F M+ KG +P T +NL + E V V+K +
Sbjct: 267 C-KARAMDKAEA--FLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSIL 323
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D+ + N ++ LC G+++EA V M KG +PDV Y ++ + L L
Sbjct: 324 PDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDL 383
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+D M G + ++ T+N+LI ++ G ++ A+ +F+ M + GV P TY +++ LC+
Sbjct: 384 FDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCR 443
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+ A E FN+ ++ V+ + + C
Sbjct: 444 IGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFC 477
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/515 (20%), Positives = 217/515 (42%), Gaps = 31/515 (6%)
Query: 55 VINPYLLTHHSLALGFF-----NWASQ------QPNFTHSPLSYHSILKSLSLSRQINAI 103
V +P ++ ++++ GFF N A Q ++Y S++ +L +R ++
Sbjct: 216 VCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKA 275
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLL 161
++ L+Q+ + D+ Y +I ++A VF E++ + I P++ N+L+
Sbjct: 276 EAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRR--QSILPDVVALNTLM 333
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
L G I A +FD M+ +G + + + + L + + D
Sbjct: 334 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD-------- 385
Query: 222 MINGSVIAV------LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
++ G IA ++I + +++A + +E+R KP + Y V +G
Sbjct: 386 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIG 445
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ + + GV P Y I G + +AKEL I++ +D
Sbjct: 446 KMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFG 505
Query: 336 ALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
++I ++ + A F+ + G P + L C K ++ + V+ + +
Sbjct: 506 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 565
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ Y +V+ C GR+ E + +EM +KG+ P YN +++ PA
Sbjct: 566 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 625
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K + +M SG + N TY+I++ + + A+ LF + V D T +++ G
Sbjct: 626 KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 685
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
+ Q ++ A ++F S++ ++ ++ + MI+
Sbjct: 686 MFQTRRVEEAKDLF-ASISRSGLVPCAVTYSIMIT 719
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 175/414 (42%), Gaps = 12/414 (2%)
Query: 113 NKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYI 170
+ I D + +I + KA +FNE++ + + P + +++A L G +
Sbjct: 390 DGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDH--GVKPHVVTYMTVIAALCRIGKM 447
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D+A++ F++M +GV + I FC + L + ++ E+ N M V
Sbjct: 448 DDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMN--NGMRLDIVFFG 505
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
II+ CK RV +A + D PD + Y ++ + + L+G + + V
Sbjct: 506 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 565
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G+ P Y + G RI E L ++ + N +I G + A
Sbjct: 566 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 625
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
V F+ M E G T S + + L K DE + ++K L A + D+ + N M++
Sbjct: 626 KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 685
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
+ + R+ EA + + R GL P Y+ ++ +E L+ A+ ++ M +GC +
Sbjct: 686 MFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPD 745
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE-----GLCQE 518
+ N ++ + + EI A + E+ + + T L++ G C+E
Sbjct: 746 SRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 799
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 3/210 (1%)
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN-DYFTDMESYN 404
P A+ FF ++ G S+L K C+ ++DE +++ + D+ SYN
Sbjct: 129 PELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYN 188
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKG--LDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+++ LC G+ +A +++ M G PDV YN++++ +E + A L+ +M
Sbjct: 189 ILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMV 248
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G +L TY+ ++ + ++ A M+ KGV PD TY +L+ G +
Sbjct: 249 QRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWK 308
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A VF + ++ L+T M SLC+
Sbjct: 309 EAVRVFKEMRRQSILPDVVALNTLMGSLCK 338
>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
Length = 579
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 196/444 (44%), Gaps = 45/444 (10%)
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNAL 174
+ L Y+ I+ + ++ + K F V+ E++ + N LL LA G +D A
Sbjct: 124 LRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAF 183
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL--- 231
++F++M + + + I + + + LS DE+ + G V+ ++
Sbjct: 184 QVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSK------GCVLNLIAFN 237
Query: 232 -IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL------ 284
II K K V++ VL ++ +C+P+ Y I + G + VL
Sbjct: 238 TIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRF 297
Query: 285 ----------KKKRKLGVAPRTN-------------DYREFILGLIV---ERRICEAKEL 318
K K G A + D F+ L V + EA +L
Sbjct: 298 MNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDL 357
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCK 377
++ D + N + ++ + S I F+ M G +P + T + + + +
Sbjct: 358 LHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGR 417
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
D+ E+++V+ A+ D+ +YN +++ L G L EA+ + +EM+ KG DPDV
Sbjct: 418 VGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFT 477
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
Y+ L+E + + + A L+D+M + GC+ N+ TYNIL+ G+ E A +L+ M
Sbjct: 478 YSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMK 537
Query: 498 EKGVAPDATTYTSL--LEGLCQET 519
++G+ PD+ TY+ L LE Q T
Sbjct: 538 QQGLIPDSITYSILERLESRSQRT 561
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y +V S + + + V +EM+RKG D+ YN L++A + ++ A ++++ M
Sbjct: 130 TYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDM 189
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
C + TY ILI + G L F M+ KG + + +++E L + +
Sbjct: 190 KQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMV 249
Query: 522 QAAFEVFNKSVNHD 535
V +K V +D
Sbjct: 250 DKVIFVLSKMVEND 263
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 116/299 (38%), Gaps = 37/299 (12%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I+ + + V + F+V +E+R + K D AY ++ + G V + V + ++
Sbjct: 134 IVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKH 193
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
P Y I +SGK G S +
Sbjct: 194 CVPDAYTYTILIR------------------MSGK-----------AGRTSKF-----LS 219
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
FF+ M+ KG V L + + + L K D+++ V + ND + +Y++ + L
Sbjct: 220 FFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILA 279
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
T G+L V+ R + S Y+ L+++ C+ A ++ +M+ S G+
Sbjct: 280 TEGQLHRLNEVLDICSRF---MNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRD 336
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ ++ + A+ L H M EKG+ D Y + L + + +F+K
Sbjct: 337 AFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDK 395
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/497 (22%), Positives = 207/497 (41%), Gaps = 94/497 (18%)
Query: 66 LALGFFNWASQQPNFTHSPLSY--HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
L L FF WAS+Q ++S + S+LK L+ R I+++L+ +K ++
Sbjct: 76 LGLNFFEWASKQSTLSNSLDGFVCSSLLKLLARFRVFKEIENLLETMKSKELIPTCEALS 135
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMS 181
F+I + ++A ++N V + + P++ CNSLL +L G ++ A K++DEM
Sbjct: 136 FVISAYAGSGLVKEALELYNTV-IDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMV 194
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
R N ++ + + + G CK +
Sbjct: 195 DR------------------------------------NGDVDNYTVCI-VTKGLCKEGK 217
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
VEE ++++ + C P+ + Y + + + G + ++ K+ + G P Y
Sbjct: 218 VEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGA 277
Query: 302 FILGLI-------VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFN 354
I V++ + E KE G + I + +++A I+ A+
Sbjct: 278 MINAFCKKGKFEAVDKLLVEMKERGLAV---SLQIFNGIIDARFKHGCEIEAADAV---R 331
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
+MIE G P DM +YN +++ C+ G
Sbjct: 332 WMIESGCEP-----------------------------------DMATYNTLINGSCSKG 356
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
++REA +++ R+GL P+ Y L+ A + A +L +M G + +L Y
Sbjct: 357 KVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYG 416
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA----FEVFNK 530
L+ GE++ AL + M+E+G+ PDA Y L+ GLC++ AA E+ ++
Sbjct: 417 ALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQ 476
Query: 531 SVNHDVMLARSILSTFM 547
+V D + +++ F+
Sbjct: 477 NVTPDAFVNATLVDGFI 493
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 164/375 (43%), Gaps = 14/375 (3%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ + +G A ++ EMS RG I +G + ++ L++ D++ +R
Sbjct: 383 LIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMER- 441
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
++ + I +++ G CK R A ++L E+ + PD + + F G++ E
Sbjct: 442 -GILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDE 500
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
+ + + + G+ + I G + +A + + +G + D+ + +I
Sbjct: 501 AKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIID 560
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G V D R A+ F M++K P + T ++L C+ + +V++ + + +
Sbjct: 561 GYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEP 620
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK-- 456
++ +Y +++ + C G+L +A ++M P+ + +N L+ + + + K
Sbjct: 621 NVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRS 680
Query: 457 ---------LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+ M + G + YN ++ + ++ AL+L M+ KG PD +
Sbjct: 681 NSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVS 740
Query: 508 YTSLLEGLCQETNLQ 522
+ +LL GLC E LQ
Sbjct: 741 FIALLHGLCLEGRLQ 755
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 171/430 (39%), Gaps = 3/430 (0%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y++++ + I + + K++KV Y +I + + + + E+K
Sbjct: 240 YNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMK 299
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
+ +I N ++ G A M G E + I C K+
Sbjct: 300 ERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVR 359
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ +L+ +R + +IH F K A ++L E+ R D IAY
Sbjct: 360 EAEELLEHAIRR--GLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGA 417
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ + G V V K + G+ P N Y + GL + R AK+L ++
Sbjct: 418 LVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQN 477
Query: 327 FTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
T D V L+ G + + A F IE+G ++ + + K CK ++ +
Sbjct: 478 VTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDAL 537
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
+K + + D +Y+ ++ LR A + M +K P+V + SL+
Sbjct: 538 LCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGF 597
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
CR L A+K++++M + G N+ TY ILI F + G++ A F ML P+
Sbjct: 598 CRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPND 657
Query: 506 TTYTSLLEGL 515
T+ L+ GL
Sbjct: 658 ATFNYLVNGL 667
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/474 (21%), Positives = 201/474 (42%), Gaps = 32/474 (6%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQ-GKNTQKAFSVFNE 144
+Y +++ + + A+D +L ++K + + ++ II + + G + A +V
Sbjct: 274 TYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWM 333
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ CE P++ N+L+ S G + A ++ + RG+ + + I F +N
Sbjct: 334 IESGCE---PDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKN 390
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ + +L E+ +R +++ +IA ++HG V+ A V D++ R PD
Sbjct: 391 GEYVRASELLIEMSERGHTL---DLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDA 447
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
Y ++ G + +L + V P + G I + EAK+L ++
Sbjct: 448 NIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQL 507
Query: 322 IVSGKFTIDDDVL--NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ + ID V+ NA+I G A++ F M P T S + K+
Sbjct: 508 TI--ERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQ 565
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
N + ++ ++ ++ ++ +++ C +G L A V +EM+ G +P+V Y
Sbjct: 566 NDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTY 625
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA--------- 489
L+ C+E L A ++QM + C N T+N L++ + I +
Sbjct: 626 TILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPN 685
Query: 490 --LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
L F M+ G Y S+L LCQ ++ A ++ HD M+++
Sbjct: 686 LTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQL------HDKMMSKG 733
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 159/403 (39%), Gaps = 45/403 (11%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+C+SLL +LA + + M + + + I + + + + L + + V
Sbjct: 98 VCSSLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTV 157
Query: 216 RKRENSMIN----GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
N + + S++ +L+ HG +VE A KV DE+ R D IV +
Sbjct: 158 IDVHNCVPDVFACNSLLNLLVHHG-----KVEIARKVYDEMVDRNGDVDNYTVCIVTKGL 212
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
G V E +++K+ G P Y
Sbjct: 213 CKEGKVEEGRHLIEKRWGKGCVPNIVFY-------------------------------- 240
Query: 332 DVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
N LI G + D A + F + KG +PT+ T + CK+ K + + ++
Sbjct: 241 ---NTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVE 297
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ ++ +N ++ G EA ++ M G +PD++ YN+L+ C +
Sbjct: 298 MKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGK 357
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+R A++L + G N +Y LI FS+ GE A L M E+G D Y +
Sbjct: 358 VREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGA 417
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
L+ GL + A V +K + ++ +I + M LC++
Sbjct: 418 LVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKK 460
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/358 (19%), Positives = 146/358 (40%), Gaps = 28/358 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++ L ++ +++ +V ++ I D+++Y ++ L + A +
Sbjct: 413 IAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLL-- 470
Query: 145 VKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
V+ +++ P+ + +L+ G +D A K+F RG++ S + I +C+
Sbjct: 471 VEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKY 530
Query: 203 AKLGQVLSMLDEVRKRENSMING-----SVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
+ L KR M NG II G+ K + A ++ + + C
Sbjct: 531 GMMNDALLCF----KR---MFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTC 583
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
KP+ + + + F G + E V ++ R G P Y I E ++ +A
Sbjct: 584 KPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACF 643
Query: 318 LGEVIVSGKFTIDDDVLNALIGSV------------SSIDPRSAIVFFNFMIEKGRVPTL 365
E ++ K +D N L+ + S+ P + FF MI G +
Sbjct: 644 FFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRI 703
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ +++ LC+ ++++ + + + D S+ ++ LC GRL++ VI
Sbjct: 704 AAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDWNNVI 761
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 115/520 (22%), Positives = 220/520 (42%), Gaps = 61/520 (11%)
Query: 45 DSLSPSLVARVINPYLLTHHSL--------ALGFFNWASQQ---PNFTHSPLSYHSILKS 93
D SP +V+ Y + H L A FN Q+ PN ++Y+SI+ +
Sbjct: 266 DGCSPDVVS-----YTMVIHGLFMEGEISKACNLFNEMVQKGVVPNV----VTYNSIVHA 316
Query: 94 LSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG 153
L +R ++ + VL+Q+ N I D Y +I ++A +F E+ E +
Sbjct: 317 LCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTR--EGLI 374
Query: 154 PEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM 211
P+I NSL+ L A ++F ++ +G + I + + + + + + ++
Sbjct: 375 PDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNL 434
Query: 212 LDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
+ +N ++ S ++I+ K ++EA + E+R + P+ + Y V
Sbjct: 435 FHSMT--DNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAAL 492
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTID 330
MG + + L + +G+ P T Y I G + +AKEL E++ G
Sbjct: 493 CRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGI---- 548
Query: 331 DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
PR I FF+ +I +LC + +V+ +
Sbjct: 549 ---------------PRPNITFFSSIIH---------------SLCNEGRVMNAQDVFNL 578
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ D+ ++N ++ C G++ +A+GV+ M G +PDV Y++L+ +
Sbjct: 579 VIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGR 638
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ L+ +M TY++++ G A ++FH M+E G A +TYT
Sbjct: 639 IDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTI 698
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
+L+GLC+ A +F+K ++ +IL+T + +L
Sbjct: 699 ILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHAL 738
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 175/407 (42%), Gaps = 30/407 (7%)
Query: 151 DIGPEICNSLL-AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
D+GP LL A L +DG + N F+ C + + L
Sbjct: 182 DLGPAFFARLLRAGLRTDGIVTN---------------------TFLKCLCYAKRTDEAL 220
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE---CKPDFIAYRI 266
SML R E + + +I C G R +EA +L LR+ + C PD ++Y +
Sbjct: 221 SMLLH-RMSELGCVPDAFSYNTVIKSLCGGSRSQEALDML--LRMTKGDGCSPDVVSYTM 277
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
V + G + + + + + GV P Y + L R + +A+ + +
Sbjct: 278 VIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNS 337
Query: 327 FTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
D+ A+I S + + A F M +G +P + T ++L +LCK +S E
Sbjct: 338 IQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAA 397
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
E++ ++ + D+ SY++++ T GR + + M G+ D +N L+ A
Sbjct: 398 EIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAH 457
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
+ ++ A ++ +M G S N+ TY +I+ +G + A+ M+ G+ P+
Sbjct: 458 AKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNT 517
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR-SILSTFMISLC 551
Y SL++G C +L A E+ ++ ++ + + S+ + SLC
Sbjct: 518 VVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLC 564
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/481 (22%), Positives = 210/481 (43%), Gaps = 25/481 (5%)
Query: 85 LSYHSILKSL-SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
SY++++KSL SR A+D +L+ K + + D Y +I L KA ++FN
Sbjct: 237 FSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFN 296
Query: 144 EVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
E+ + + P + NS++ L +D A + +M ++ + + I +
Sbjct: 297 EMVQ--KGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSC 354
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ + M E+ + +I V ++ CK KR +EA ++ + + KPD
Sbjct: 355 LGRWKEAAKMFKEMTRE--GLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDI 412
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI-----LGLIVERRICEAK 316
I+Y I+ + G + + G+ ++ + I G++ E + +
Sbjct: 413 ISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTE 472
Query: 317 ELGEVIVSGKFTIDDDVLNAL--IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
G+ VS V+ AL +G ++ A+ + MI G P +L +
Sbjct: 473 MRGQG-VSPNVVTYATVIAALCRMGRLAD-----AMEKLSQMISIGLKPNTVVYHSLIQG 526
Query: 375 LCKRN---KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
C K+ ELV +++ ++ ++ ++ LC GR+ A V + G
Sbjct: 527 FCTHGDLIKAKELVS--EMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGD 584
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
PD+ +NSL++ C + A + D M ++G ++ TY+ LI+ + + G I+ L
Sbjct: 585 RPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLI 644
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
LF ML K V P TY+ +L+GL + AA ++F++ + ++ S + + LC
Sbjct: 645 LFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLC 704
Query: 552 R 552
R
Sbjct: 705 R 705
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 138/322 (42%), Gaps = 42/322 (13%)
Query: 236 FCKGKRVEEAFKVLDELRIRE--CKPDFIAYRIVAEEFKLMGSVFERE---VVLKKKRKL 290
C KR +EA +L R+ E C PD +Y V + L G +E ++L+ +
Sbjct: 210 LCYAKRTDEALSMLLH-RMSELGCVPDAFSYNTVIKS--LCGGSRSQEALDMLLRMTKGD 266
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
G +P Y I GL +E I +A L
Sbjct: 267 GCSPDVVSYTMVIHGLFMEGEISKACNL-------------------------------- 294
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
FN M++KG VP + T +++ LCK D+ V + + N D +Y M+
Sbjct: 295 --FNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGY 352
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
GR +EA + +EM R+GL PD+ +NSLM++ C+ + A +++ + G ++
Sbjct: 353 SCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDI 412
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+Y+IL+ ++ G LFH+M + G+ D+ + L+ + + A +F +
Sbjct: 413 ISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTE 472
Query: 531 SVNHDVMLARSILSTFMISLCR 552
V +T + +LCR
Sbjct: 473 MRGQGVSPNVVTYATVIAALCR 494
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 176/422 (41%), Gaps = 32/422 (7%)
Query: 82 HSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
H P +SY +L + + ++++ + N I DS + +I + + +A
Sbjct: 408 HKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEAL 467
Query: 140 SVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
+F E++ + + P + +++A L G + +A++ +M G++ +T+ + I
Sbjct: 468 LIFTEMR--GQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQ 525
Query: 198 KFCENAKLGQ----VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
FC + L + V M+D+ R N S IIH C RV A V + +
Sbjct: 526 GFCTHGDLIKAKELVSEMMDQGIPRPNITFFSS-----IIHSLCNEGRVMNAQDVFNLVI 580
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+PD + + + + L+G + + VL G P Y I G RI
Sbjct: 581 HIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRID 640
Query: 314 EA---------KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT 364
+ K + V+ +D G + +A F+ MIE G +
Sbjct: 641 DGLILFREMLCKRVKPTTVTYSLVLD--------GLFRAGRTSAAKKMFHEMIESGTAMS 692
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
+ST + + + LC+ N +DE + ++ L A + ++ N M+ L R EA+ +
Sbjct: 693 ISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFA 752
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
+ GL P+ S Y ++ +E + A ++ M +GC+ + + N +I + G
Sbjct: 753 SVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKG 812
Query: 485 EI 486
EI
Sbjct: 813 EI 814
>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
Length = 579
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 196/444 (44%), Gaps = 45/444 (10%)
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNAL 174
+ L Y+ I+ + ++ + K F V+ E++ + N LL LA G +D A
Sbjct: 124 LRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAF 183
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL--- 231
++F++M + + + I + + + LS DE+ + G V+ ++
Sbjct: 184 QVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSK------GCVLNLIAFN 237
Query: 232 -IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL------ 284
II K K V++ VL ++ +C+P+ Y I + G + VL
Sbjct: 238 TIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRF 297
Query: 285 ----------KKKRKLGVAPRTN-------------DYREFILGLIV---ERRICEAKEL 318
K K G A + D F+ L V + EA +L
Sbjct: 298 MNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDL 357
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCK 377
++ D + N + ++ + S I F+ M G +P + T + + + +
Sbjct: 358 LHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGR 417
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
D+ E+++V+ A+ D+ +YN +++ L G L EA+ + +EM+ KG DPDV
Sbjct: 418 VGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFT 477
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
Y+ L+E + + + A L+D+M + GC+ N+ TYNIL+ G+ E A +L+ M
Sbjct: 478 YSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMK 537
Query: 498 EKGVAPDATTYTSL--LEGLCQET 519
++G+ PD+ TY+ L LE Q T
Sbjct: 538 QQGLIPDSITYSILERLESRSQRT 561
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y +V S + + + V +EM+RKG D+ YN L++A + ++ A ++++ M
Sbjct: 130 TYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDM 189
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
C + TY ILI + G L F M+ KG + + +++E L + +
Sbjct: 190 KQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMV 249
Query: 522 QAAFEVFNKSVNHD 535
V +K V +D
Sbjct: 250 DKVIFVLSKMVEND 263
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 116/299 (38%), Gaps = 37/299 (12%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I+ + + V + F+V +E+R + K D AY ++ + G V + V + ++
Sbjct: 134 IVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKH 193
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
P Y I +SGK G S +
Sbjct: 194 CVPDAYTYTILIR------------------MSGK-----------AGRTSKF-----LS 219
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
FF+ M+ KG V L + + + L K D+++ V + ND + +Y++ + L
Sbjct: 220 FFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILA 279
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
T G+L V+ R + S Y+ L+++ C+ A ++ +M+ S G+
Sbjct: 280 TEGQLHRLNEVLDICSRF---MNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRD 336
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ ++ + A+ L H M EKG+ D Y + L + + +F+K
Sbjct: 337 AFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDK 395
>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Cucumis sativus]
Length = 830
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/487 (22%), Positives = 211/487 (43%), Gaps = 25/487 (5%)
Query: 82 HSPLSYHSILKSL----SLSRQINAIDSVLKQ-VKVNKITLDSSVYRFIIPSLIQG--KN 134
H SY+ +L L S+ + D + K V+ + +T ++ F++ L+ G K
Sbjct: 304 HDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKV 363
Query: 135 TQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
QK + + P++ +L+ G I+ ALK+ E RG + + I +
Sbjct: 364 VQKML---------LQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFY 414
Query: 193 GVFIWKFCENAKLGQVLSMLDEVR--KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD 250
+ + C+ ++ + L++ DE+ + E I S++ IHG CK V+ A+++ +
Sbjct: 415 NMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSIL----IHGLCKEGFVQRAYQLYE 470
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
++R++ P A R V G++ E ++ + Y I G +
Sbjct: 471 QMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLD 530
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
I EA +L ++ T N LI G D A + KG VP++ T +
Sbjct: 531 GIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYT 590
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
L C+ E+ + AN +Y V++ LC ++ E+ +++ M K
Sbjct: 591 TLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAK 650
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
GL PD YN++++ C+ + A +L++ M C TY +LI+ G+++
Sbjct: 651 GLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDV 710
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
R+ ++ ++ + TY ++++ C + + A FN+ + +++ S +
Sbjct: 711 DRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINR 770
Query: 550 LCRRVLI 556
LC+R LI
Sbjct: 771 LCKRGLI 777
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/468 (22%), Positives = 201/468 (42%), Gaps = 17/468 (3%)
Query: 93 SLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQG-KNTQKAFSVFNEVKFNCED 151
+ + SR D++ K+ + +SV + SL+ ++T + V+NE+K +
Sbjct: 177 AFAYSRHEMIHDALFVIAKMKDLNFQASVPTY--NSLLHNMRHTDIMWDVYNEIKVSGAP 234
Query: 152 IGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM 211
+ L+ L +++A+ + S++ V S + + KFC+ + +
Sbjct: 235 QSECTTSILIHGLCEQSKLEDAISFLHD-SNKVVGPSIVSINTIMSKFCK-------VGL 286
Query: 212 LDEVRK-----RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+D R +N +++ S +++HG C ++EA D++ +PD + Y
Sbjct: 287 IDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNT 346
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+A+ F L+G + V++K G+ P Y I G I EA +L + +S
Sbjct: 347 LAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRG 406
Query: 327 FTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
F ++ N L+ + + A+ F+ M P S L LCK
Sbjct: 407 FKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAY 466
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
++Y+ + F + ++ L +G + EA R L DV YN +++
Sbjct: 467 QLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGY 526
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
R D + A +L+ +M G + ++ T+N LI+ F G++ A ++ + KG+ P
Sbjct: 527 VRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSV 586
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
TYT+L+ C+ N+Q F ++ + V+ + + LCR+
Sbjct: 587 VTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQ 634
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/478 (20%), Positives = 193/478 (40%), Gaps = 38/478 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+++ K L ++ V++++ + + D Y +I Q N ++A + E
Sbjct: 342 VTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQE 401
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ N LL+ L G I+ AL +FDEM +E I + + I C+
Sbjct: 402 TLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGF 461
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ + + +++R + + + AVL+ G K + EA D + D + Y
Sbjct: 462 VQRAYQLYEQMRLKRKFPHHFAQRAVLL--GLFKNGNISEARNYFDTWTRMDLMEDVVLY 519
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
I+ + + + + E + K + G+ P + I G + EA+++ EVI
Sbjct: 520 NIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRL 579
Query: 325 GKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
L+ + + + + F + M VPT T + L K LC++NK E
Sbjct: 580 KGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHE 639
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP-DVSF----- 437
+++ + + A D +YN ++ C + +A + M DP V++
Sbjct: 640 SLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLIN 699
Query: 438 -----------------------------YNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
Y ++++A C + + A ++QM A G
Sbjct: 700 ALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVI 759
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+++ Y+ +I++ + G I A F ML +GV PD ++L Q+ N + FE
Sbjct: 760 SIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFE 817
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/442 (18%), Positives = 183/442 (41%), Gaps = 16/442 (3%)
Query: 56 INPYLLTHHSLALGFFNWASQQP-----------NFTHSPLSYHSILKSLSLSRQINAID 104
+NP L+T+ +L G + + F + + Y+ +L L +I
Sbjct: 372 LNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEAL 431
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
++ +++ ++ D VY +I L + Q+A+ ++ +++ + ++L L
Sbjct: 432 TLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGL 491
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
+G I A FD + + + + + I + + + + + ++ +R I
Sbjct: 492 FKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERG---IT 548
Query: 225 GSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
SV+ +I+GFC+ + EA K+L+ +R++ P + Y + + +G++ E
Sbjct: 549 PSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHF 608
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS-VS 342
L + V P Y I GL + ++ E+ +L E + + D N +I
Sbjct: 609 LHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCK 668
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
+ A+ +N M+ PT T L LC ++ + + + +
Sbjct: 669 GKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVT 728
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y ++ C G++ +A G +M KG + Y++++ C+ L+ AK + M
Sbjct: 729 YMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMML 788
Query: 463 ASGCSGNLKTYNILISKFSEVG 484
+ G + + + +++ F + G
Sbjct: 789 SEGVTPDPEICKTVLNAFHQQG 810
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 114/297 (38%), Gaps = 80/297 (26%)
Query: 328 TIDDDVLNALIGSVSSIDPRSAIVFFNFMIE--------------------KGRVPTL-S 366
T+ + V++ ++ + ++ P A+ FF F+I KGR L S
Sbjct: 79 TLSETVVDGVLDRLRTLKPDVAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFKELDS 138
Query: 367 TLSNLSKNLCKRNKS---DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ NL + + S D L+E ++ +N DM ++ + +A VI
Sbjct: 139 VIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFA-----YSRHEMIHDALFVI 193
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD---QMFASG-----CSGNLKTY-- 473
+MK V YNSL+ +R +WD ++ SG C+ ++ +
Sbjct: 194 AKMKDLNFQASVPTYNSLLHN------MRHTDIMWDVYNEIKVSGAPQSECTTSILIHGL 247
Query: 474 ---------------------------NILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
N ++SKF +VG I+ A F M++ G+ D+
Sbjct: 248 CEQSKLEDAISFLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSF 307
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDV--------MLARSILSTFMISLCRRVL 555
+Y LL GLC ++ A + H V LA+ L ++S R+V+
Sbjct: 308 SYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVV 364
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 191/441 (43%), Gaps = 7/441 (1%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALK 175
D Y +I + + K +S +NE+ + I P + NS++A L +D A++
Sbjct: 87 DVVSYSTVINGFFKEGDLDKTYSTYNEMLD--QRISPNVVTYNSIIAALCKAQTVDKAME 144
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ M GV + + + FC + + + + L ++R + + V ++
Sbjct: 145 VLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRS--DGVEPDVVTYNSLMDY 202
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
CK R EA K+ D + R KP+ Y + + + G++ E +L + G+ P
Sbjct: 203 LCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 262
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFN 354
+ + + ++ EA + + + A+IG + S A+++F
Sbjct: 263 HYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 322
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
MI++G P ++L LC NK + E+ + + +N ++ C G
Sbjct: 323 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 382
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
R+ E+ + M R G+ PD+ Y++L++ C + A KL M + G + TY+
Sbjct: 383 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYS 442
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
LI+ + ++ ++ AL LF M GV+PD TY +L+GL Q AA E++
Sbjct: 443 TLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKS 502
Query: 535 DVMLARSILSTFMISLCRRVL 555
L S + + LC+ L
Sbjct: 503 GRQLELSTYNIILHGLCKNKL 523
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/412 (20%), Positives = 191/412 (46%), Gaps = 5/412 (1%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDE 179
Y ++ L +Q+A + + + + D P++ + +++ +G +D ++E
Sbjct: 54 YNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNE 113
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M + + + + + I C+ + + + +L + K + ++ + I+HGFC
Sbjct: 114 MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK--SGVMPDCMTYNSIVHGFCSS 171
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+ +EA L ++R +PD + Y + + G E + K G+ P Y
Sbjct: 172 GQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTY 231
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIE 358
+ G + + E L +++V + V + L+ + + + A++ F+ M +
Sbjct: 232 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQ 291
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
+G P T + LCK + ++ + ++ + YN ++ LCT +
Sbjct: 292 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 351
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A +I EM +G+ + F+NS++++ C+E + ++KL+D M G ++ TY+ LI
Sbjct: 352 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 411
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ G+++ A +L +M+ G+ PD TY++L+ G C+ + ++ A +F +
Sbjct: 412 GYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFRE 463
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/473 (21%), Positives = 210/473 (44%), Gaps = 20/473 (4%)
Query: 58 PYLLTHHSLALGFFNWASQQPNFTH---------SP--LSYHSILKSLSLSRQINAIDSV 106
P ++++ ++ GFF ++ SP ++Y+SI+ +L ++ ++ V
Sbjct: 86 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEV 145
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVL 164
L + + + D Y I+ ++A K + + P++ NSL+ L
Sbjct: 146 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLK--KMRSDGVEPDVVTYNSLMDYL 203
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
+G A K+FD M+ RG++ +G + + L ++ +LD + R N
Sbjct: 204 CKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD-LMVRNGIHPN 262
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
V ++L+ + K ++VEEA V ++R + P+ + Y V G V + +
Sbjct: 263 HYVFSILVC-AYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 321
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
++ G++P Y I GL + A+EL ++ ++ N++I S
Sbjct: 322 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK- 380
Query: 345 DPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
+ R + F+ M+ G P + T S L C K DE ++ + + D +
Sbjct: 381 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 440
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y+ +++ C R+++A + +EM+ G+ PD+ YN +++ + AK+L+ +
Sbjct: 441 YSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 500
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
SG L TYNI++ + + ALR+F N+ + +A T+ +++ L
Sbjct: 501 KSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDAL 553
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 151/325 (46%), Gaps = 3/325 (0%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIR--ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
++++G C R +EA ++L + +C PD ++Y V F G + + +
Sbjct: 56 ILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEML 115
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPR 347
++P Y I L + + +A E+ +V D N+++ G SS P+
Sbjct: 116 DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPK 175
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
AIVF M G P + T ++L LCK + E +++ ++ ++ +Y ++
Sbjct: 176 EAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLL 235
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
T G L E +G++ M R G+ P+ ++ L+ A +++ + A ++ +M G +
Sbjct: 236 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLN 295
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N TY +I + G +E A+ F M+++G++P Y SL+ GLC + A E+
Sbjct: 296 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 355
Query: 528 FNKSVNHDVMLARSILSTFMISLCR 552
+ ++ + L ++ + S C+
Sbjct: 356 ILEMLDRGICLNTIFFNSIIDSHCK 380
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 187/433 (43%), Gaps = 6/433 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++L+ + + + +L + N I + V+ ++ + + + ++A VF+++
Sbjct: 230 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 289
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + +++ +L G +++A+ F++M G+ I + I C K
Sbjct: 290 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 349
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ ++ E+ R + ++ II CK RV E+ K+ D + KPD I Y
Sbjct: 350 ERAEELILEMLDR--GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 407
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + + L G + E +L +G+ P Y I G R+ +A L + S
Sbjct: 408 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESS 467
Query: 326 KFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ D N ++ G + +A + + + GR LST + + LCK +D+
Sbjct: 468 GVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDA 527
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+ +++ L D + ++N+M+ L GR EA + GL P+ Y + E
Sbjct: 528 LRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN 587
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
+ LL +L+ M +GC+ + N ++ + + GEI A + EK + +
Sbjct: 588 IIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLE 647
Query: 505 ATT---YTSLLEG 514
A+T + LL G
Sbjct: 648 ASTASLFIDLLSG 660
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 90/179 (50%), Gaps = 3/179 (1%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS--ANDYFTDMESYNVMVSFL 410
F+ ++ +G +P + + + L LC N+S E +E+ +++ D D+ SY+ +++
Sbjct: 40 FDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGF 98
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
G L + Y EM + + P+V YNS++ A C+ + A ++ M SG +
Sbjct: 99 FKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDC 158
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
TYN ++ F G+ + A+ M GV PD TY SL++ LC+ A ++F+
Sbjct: 159 MTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 217
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 3/139 (2%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD--PDVSFYNSLMEACCREDLLRPAKK 456
D+ SYN++++ LC R +EA ++ M G D PDV Y++++ +E L
Sbjct: 50 DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYS 109
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+++M S N+ TYN +I+ + ++ A+ + M++ GV PD TY S++ G C
Sbjct: 110 TYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 169
Query: 517 QETNLQAAFEVFNKSVNHD 535
+ A VF K + D
Sbjct: 170 SSGQPKEAI-VFLKKMRSD 187
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 124/536 (23%), Positives = 229/536 (42%), Gaps = 75/536 (13%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWASQQ-PNFTHSPLSYHSILKSLSLS---RQIN 101
SL+P+ + ++ L LAL FF+ S P F H +Y IL LS S ++I+
Sbjct: 127 SLTPAEASEILKS--LNSPDLALQFFHRCSSLCPKFRHDAFTYSRILLMLSHSSSSKRID 184
Query: 102 AIDSVLKQVKVNKIT--------------------------------LDSSVYRFIIPSL 129
+ +L Q+ ++I L++ YR ++ +
Sbjct: 185 QVREILSQMDRDQIRGTISTVNILIKIFSSNEDLELCTGLIKKWDLRLNAYTYRCLLQAH 244
Query: 130 IQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
I+ +++ +AF+V+ E+ N + N LL LA D +D + K+F +M +
Sbjct: 245 IRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDE 304
Query: 190 IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKV 248
+ + I + + + L++ +E+ + ++IA +I K V++A +
Sbjct: 305 YTYTIMIRMTGKMGRAEESLALFEEMLTKG---CTPNLIAYNTMIQALSKSGMVDKAILL 361
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL----------------KKKRKLGV 292
+ C+P+ Y I+ G + + VL + KLG
Sbjct: 362 FCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKFINKSIYAYLVRTLSKLGH 421
Query: 293 APRT----------------NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ + Y + L + EA EL + + D + N
Sbjct: 422 SSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNT 481
Query: 337 LIGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
++ ++ + S + + M + G P + T + L +L + K E VEV++ L ++D
Sbjct: 482 VLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSD 541
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D+ SYN +++ L +G + EA+ EM+ KGL+PDV Y++L+E + D + A+
Sbjct: 542 CKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMAR 601
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
L+D+M GC N+ TYNIL+ G + L+ + E+G+ PD+ TY L
Sbjct: 602 SLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSITYAIL 657
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 115/300 (38%), Gaps = 37/300 (12%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+++ K ++++ ++KV +++++ C PD Y I+ MG E + ++
Sbjct: 274 MLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTK 333
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
G P Y I L S +D AI
Sbjct: 334 GCTPNLIAYNTMIQAL-----------------SKSGMVD-----------------KAI 359
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ F MI+ P T S + L + L EV +V ++ F + Y +V L
Sbjct: 360 LLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEV---SNKFINKSIYAYLVRTL 416
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
G EA+ + M D Y S++E+ CR A +L ++ G S +
Sbjct: 417 SKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDT 476
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
YN ++S ++ ++ L+ M + G PD TY L+ L + ++ A EVF +
Sbjct: 477 MMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEE 536
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%)
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A+ V EM G D+ YN L++A +++ L + K++ M C+ + TY I+I
Sbjct: 253 AFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIR 312
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++G E +L LF ML KG P+ Y ++++ L + + A +F
Sbjct: 313 MTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLF 362
>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 116/550 (21%), Positives = 235/550 (42%), Gaps = 57/550 (10%)
Query: 5 PATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHH 64
P DL ++++ + S+S+ P L + L L L +++PS + ++ L H
Sbjct: 83 PRRDLICKVTKILHSSSDPF-------PDLSEYLQTLNL--TITPSEASEILK--CLNHP 131
Query: 65 SLALGFFNWASQQ-PNFTHSPLSYHSIL------KSLSLSRQINAIDSVLKQ-------- 109
L+L FF + S P F H+ +Y+ +L +L S +++ I ++L
Sbjct: 132 HLSLEFFRFCSSNIPKFQHNSFTYNRLLVILSKPSALRDSERLDLIRAILDDMERCGVRG 191
Query: 110 ------------------------VKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
VK + ++ Y+ ++ + ++ N+ KAF V+ E+
Sbjct: 192 SISTINILIGIFGGGADVERCFDLVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVEL 251
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + N LL LA D +D +F +M + E + + I + K
Sbjct: 252 RRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKA 311
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI--- 262
+ L++ E+ E + +I + V++ + ++ + E F+
Sbjct: 312 DESLTLFQEMT--EKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVV-EVSNKFMNKS 368
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + +G E + + Y + L + EA +L I
Sbjct: 369 IYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKI 428
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
+ + D + N ++ ++ + S + + M + G P + + + L + + +
Sbjct: 429 HEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRV 488
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+E V++++ L + D+ S+N +++ L +G + EA+ +EM+ +GL PDV Y++L
Sbjct: 489 EEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTL 548
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+E + D + A +L+D+M A GCS N+ TYNIL+ G A+ L+ + ++G+
Sbjct: 549 IECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGL 608
Query: 502 APDATTYTSL 511
PD+ TY L
Sbjct: 609 TPDSITYAVL 618
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 90/436 (20%), Positives = 165/436 (37%), Gaps = 86/436 (19%)
Query: 158 NSLLAVLASDGYIDNALKM------FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM 211
N LL +L+ + ++ ++ D+M GV S + I F A + +
Sbjct: 156 NRLLVILSKPSALRDSERLDLIRAILDDMERCGVRGSISTINILIGIFGGGADVERCF-- 213
Query: 212 LDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
D V+K + M + +L H + +AF+V ELR R K D AY ++ +
Sbjct: 214 -DLVKKWDLQMNCYTYKCLLQAH--LRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDAL 270
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
V + +V K ++R+ CE E I
Sbjct: 271 AKDNKVDQVYMVFKD---------------------MKRKHCEPDEYTYTI--------- 300
Query: 332 DVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK-- 389
+ + G + D ++ F M EKG P L + + + L D+ + ++
Sbjct: 301 --MIRMTGKIGKAD--ESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKM 356
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE- 448
V+ ++ F + Y +V L G EA+ + M + D Y S++E+ C
Sbjct: 357 VVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAG 416
Query: 449 ------DLLRPAKK----------------------------LWDQMFASGCSGNLKTYN 474
DLL + L+++M G S ++ +YN
Sbjct: 417 KTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYN 476
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF----EVFNK 530
ILIS F G +E A+++F + PD ++ SL+ L + ++ A E+ +
Sbjct: 477 ILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREE 536
Query: 531 SVNHDVMLARSILSTF 546
++ DV+ +++ F
Sbjct: 537 GLSPDVVTYSTLIECF 552
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/485 (22%), Positives = 204/485 (42%), Gaps = 21/485 (4%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
LAL FF + + ++ H + R A+D +L + D Y +
Sbjct: 132 LALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSIL 191
Query: 126 IPSLI-QGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSH 182
+ SL QGK+ Q A + + P + N+++ +G ++ A +F EM
Sbjct: 192 LKSLCDQGKSGQ-ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 250
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE-VRKR---ENSMINGSVIAVLIIHGFCK 238
RG+ + + + C+ + + + L + V KR N N +I+G+
Sbjct: 251 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN------LIYGYSS 304
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+ +EA +V E+R PD + ++ G + E V G P
Sbjct: 305 TGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 364
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMI 357
Y + G + + + +L ++++ D N LI + ++ A++ FN M
Sbjct: 365 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR 424
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+ G P + T + LC+ K D+ +E + + D +YN ++ CT G L
Sbjct: 425 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 484
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+A +I E+ G+ D+ F++S++ C+ + A+ ++D G + YN+L+
Sbjct: 485 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 544
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ VG++E ALR+F M+ G+ P+ Y +L+ G C+ + +F + M
Sbjct: 545 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFRE------M 598
Query: 538 LARSI 542
L R I
Sbjct: 599 LQRGI 603
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 165/365 (45%), Gaps = 39/365 (10%)
Query: 227 VIAVLIIHGFCKGKRVEEAFKVL---------------------------------DELR 253
+IA ++ GFC+ KR +EA +L D LR
Sbjct: 150 IIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 209
Query: 254 IRE-----CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
+ C P+ +AY V + F G V + + K+ + G+ P Y + L
Sbjct: 210 MMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCK 269
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLST 367
R + +A+ +V+ + ++ N LI SS + A+ F M +P + T
Sbjct: 270 ARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVT 329
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
LS L +LCK K E +V+ ++ D+ SYN+M++ T G L + + M
Sbjct: 330 LSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML 389
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
G+ PD +N L++A +L A ++++M G ++ TY +I+ +G+++
Sbjct: 390 GDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMD 449
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
A+ F+ M+++GVAPD Y L++G C +L A E+ ++ +N+ + L S+ +
Sbjct: 450 DAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSII 509
Query: 548 ISLCR 552
+LC+
Sbjct: 510 NNLCK 514
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/442 (22%), Positives = 194/442 (43%), Gaps = 21/442 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV--YRFIIPSLIQGKNTQKAFSVF 142
SY +LKSL + D +L+ + +V Y +I + + KA +F
Sbjct: 186 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLF 245
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E+ I P++ NS++ L +D A +M ++ V + + I+ +
Sbjct: 246 KEMVQ--RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS 303
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + + + E+R+ +S++ V +++ CK +++EA V D + ++ PD
Sbjct: 304 STGQWKEAVRVFKEMRR--HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 361
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+Y I+ + G + + + G+AP D+ F + LI C +
Sbjct: 362 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP---DFYTFNV-LIKAYANCGMLDKAM 417
Query: 321 VIVSG--KFTIDDDVLN-----ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+I + + DV+ A + + +D A+ FN MI++G P + L +
Sbjct: 418 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMD--DAMEKFNQMIDQGVAPDKYAYNCLIQ 475
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
C + E+ + N D+ ++ +++ LC GR+ +A + GL P
Sbjct: 476 GFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 535
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
D YN LM+ C + A +++D M ++G N+ Y L++ + ++G I+ L LF
Sbjct: 536 DAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLF 595
Query: 494 HNMLEKGVAPDATTYTSLLEGL 515
ML++G+ P Y+ +++GL
Sbjct: 596 REMLQRGIKPSTILYSIIIDGL 617
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/515 (19%), Positives = 223/515 (43%), Gaps = 31/515 (6%)
Query: 55 VINPYLLTHHSLALGFF-----NWASQ------QPNFTHSPLSYHSILKSLSLSRQINAI 103
V +P ++ ++++ GFF N A Q ++Y+S++ +L +R ++
Sbjct: 217 VCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKA 276
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLL 161
++ L+Q+ ++ ++ Y +I ++A VF E++ + I P++ + L+
Sbjct: 277 EAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRH--SILPDVVTLSMLM 334
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
L G I A +FD M+ +G + + + + L + + D
Sbjct: 335 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD-------- 386
Query: 222 MINGSVIAV------LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
++ G IA ++I + +++A + +E+R KPD + YR V +G
Sbjct: 387 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 446
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ + + GVAP Y I G + +AKEL I++ +D +
Sbjct: 447 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 506
Query: 336 ALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
++I ++ + A F+ + G P + L C K ++ + V+ + +
Sbjct: 507 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 566
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ Y +V+ C GR+ E + +EM ++G+ P Y+ +++ PA
Sbjct: 567 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPA 626
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K + +M SG + ++ TYNI++ + + A+ LF + V + T ++++G
Sbjct: 627 KMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 686
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
+ Q ++ A ++F S++ ++ + + MI+
Sbjct: 687 MFQTRRVEEAKDLF-ASISRSRLVPSVVTYSIMIT 720
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 180/417 (43%), Gaps = 18/417 (4%)
Query: 113 NKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYI 170
+ I D + +I + KA +FNE++ + + P++ +++A L G +
Sbjct: 391 DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH--GVKPDVVTYRTVIAALCRIGKM 448
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D+A++ F++M +GV + I FC + L + ++ E+ N M V
Sbjct: 449 DDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN--NGMHLDIVFFS 506
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
II+ CK RV +A + D PD + Y ++ + + L+G + + V
Sbjct: 507 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 566
Query: 291 GVAPRTNDYREFILGLIVERRICEA----KELGEVIVSGKFTIDDDVLNALIGSVSSIDP 346
G+ P Y + G RI E +E+ + + + +++ L + ++
Sbjct: 567 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTV-- 624
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A + F+ M E G + T + + + L K DE + ++K L A + ++ + N M
Sbjct: 625 -PAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 683
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ + + R+ EA + + R L P V Y+ ++ +E L+ A+ ++ M +GC
Sbjct: 684 IDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGC 743
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE-----GLCQE 518
N + N ++ + + EI A + E+ + + T L++ G C+E
Sbjct: 744 EPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 800
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 42/248 (16%)
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV----------------YK 389
P A+ FF ++ G + ++L + C+ ++DE +++ Y
Sbjct: 130 PELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYS 189
Query: 390 VL-----------SANDYFTDME-----------SYNVMVSFLCTSGRLREAYGVIQEMK 427
+L A+D M +YN ++ G + +A + +EM
Sbjct: 190 ILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMV 249
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
++G+ PD+ YNS++ A C+ + A+ QM N TYN LI +S G+ +
Sbjct: 250 QRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWK 309
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN----KSVNHDVMLARSIL 543
A+R+F M + PD T + L+ LC+ ++ A +VF+ K N DV +L
Sbjct: 310 EAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML 369
Query: 544 STFMISLC 551
+ + C
Sbjct: 370 NGYATKGC 377
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L P Y LM+ C R A + Q+ +G N+ N L+ F E + AL
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169
Query: 491 R-LFHNMLEKGVAPDATTYTSLLEGLCQE 518
L H E G PD +Y+ LL+ LC +
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQ 198
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 197/427 (46%), Gaps = 15/427 (3%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSL-IQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLL 161
SVL +V D++ + +I L ++GK ++ V V+ C+ P++ NS++
Sbjct: 144 SVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ---PDVVTYNSIV 200
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
+ G AL + +M R V+ + I C + + +S+ E+ E
Sbjct: 201 NGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM---ETK 257
Query: 222 MINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
I SV+ ++ G CK + + +L ++ RE P+ I + ++ + F G + E
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+ K+ G++P Y + G ++ R+ EA + +++V K + D +LI
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 341 ---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
V +D + F + ++G V T S L + C+ K E+++ + ++
Sbjct: 378 YCMVKRVD--DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D+ +Y +++ LC +G+L +A + +++++ +D + Y +++E C+ + A L
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ + G N+ TY ++IS + G + A L M E G AP+ TY +L+ +
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 518 ETNLQAA 524
+ +L A+
Sbjct: 556 DGDLTAS 562
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 183/371 (49%), Gaps = 9/371 (2%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D+A+ +F EM S + F F F A+ Q +LD ++ E + I ++ +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRF---FSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126
Query: 231 -LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
++I+ FC+ + A+ VL ++ +PD + + + L G V E V++ + +
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDP 346
G P Y + G+ A +L + D + +I S+ ID
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID- 245
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+AI F M KG ++ T ++L + LCK K ++ + K + + + ++ ++NV+
Sbjct: 246 -AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ G+L+EA + +EM +G+ P++ YN+LM+ C ++ L A + D M + C
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
S ++ T+ LI + V ++ +++F N+ ++G+ +A TY+ L++G CQ ++ A E
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 527 VFNKSVNHDVM 537
+F + V+H V+
Sbjct: 425 LFQEMVSHGVL 435
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/440 (19%), Positives = 195/440 (44%), Gaps = 7/440 (1%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+P+ T ++++++K L L +++ ++ ++ N D Y I+ + + +T
Sbjct: 155 EPDTT----TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
A + +++ ++++ L DG ID A+ +F EM +G++ S + + +
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C+ K +L ++ RE ++ + +++ F K +++EA ++ E+ R
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSRE--IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
P+ I Y + + + + + E +L + +P + I G + +R+ +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 317 ELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
++ I + + L+ G S + A F M+ G +P + T L L
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C K ++ +E+++ L + + Y ++ +C G++ +A+ + + KG+ P+V
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y ++ C++ L A L +M G + N TYN LI G++ + +L
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Query: 496 MLEKGVAPDATTYTSLLEGL 515
M G + DA++ +++ L
Sbjct: 569 MKSCGFSADASSIKMVIDML 588
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/477 (19%), Positives = 196/477 (41%), Gaps = 48/477 (10%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S + + +++ ++Q N + KQ+++N I + +I + T A+SV
Sbjct: 87 SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+V + N+L+ L +G + A+ + D M G + + + + C +
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 206
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
G LD +RK E + V II C+ ++ A + E+ + K
Sbjct: 207 ---GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ Y + G + ++LK + P + + + E ++ EA EL
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL--- 320
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
+ MI +G P + T + L C +N+
Sbjct: 321 -------------------------------YKEMITRGISPNIITYNTLMDGYCMQNRL 349
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
E + ++ N D+ ++ ++ C R+ + V + + ++GL + Y+ L
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
++ C+ ++ A++L+ +M + G ++ TY IL+ + G++E AL +F ++ + +
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSILSTFMIS-LCRR 553
YT+++EG+C+ ++ A+ +F K V +VM T MIS LC++
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY-----TVMISGLCKK 521
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 95/191 (49%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ I AI F MI +P+L S + + + + +++ K L N +
Sbjct: 63 GIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHN 122
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ + N+M++ C + AY V+ ++ + G +PD + +N+L++ E + A L D
Sbjct: 123 IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVD 182
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M +GC ++ TYN +++ G+ AL L M E+ V D TY+++++ LC++
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 520 NLQAAFEVFNK 530
+ AA +F +
Sbjct: 243 CIDAAISLFKE 253
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 131/295 (44%), Gaps = 13/295 (4%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWAS-QQPNFTH--------SP--LSYHSILKSLS 95
L +V+R I P ++T + L F Q+ N + SP ++Y++++
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
+ +++ +++L + NK + D + +I K VF +
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+ L+ G I A ++F EM GV + +G+ + C+N KL + L + +++
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+K + + G V+ II G CKG +VE+A+ + L + KP+ + Y ++ G
Sbjct: 465 QKSKMDL--GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
S+ E ++L+K + G AP Y I + + + + +L E + S F+ D
Sbjct: 523 SLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 179/395 (45%), Gaps = 7/395 (1%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVK-FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR 183
I+ +L + N +A VF + NC G ++L+ L ++G ID A+ + DEM
Sbjct: 6 IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTY-STLMHGLCNEGRIDEAVSLLDEMQVE 64
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G + + F V I C+ L + ++D + + + V ++HG C +++
Sbjct: 65 GTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLK--GCVPNEVTYNSLVHGLCLKGKLD 122
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
+A +L+ + +C P+ I + + + F G + VL + G Y I
Sbjct: 123 KAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLI 182
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRV 362
GL E + +L + +V + V +ALI G P A + M KG
Sbjct: 183 SGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHT 242
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P T S+L + + + V+K ++ ND Y+++++ LC +G+L+EA V
Sbjct: 243 PNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIV 302
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG--CSGNLKTYNILISKF 480
++M +G+ DV Y+S++ C L+ KL++QM ++ TYNIL++ F
Sbjct: 303 WKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAF 362
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ A+ + + ML++G PD T L+ L
Sbjct: 363 CTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL 397
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 159/351 (45%), Gaps = 3/351 (0%)
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
+ C + Q + + + R N + +G + L+ HG C R++EA +LDE+++
Sbjct: 6 IVLALCRVGNVDQAVEVFRGMSDR-NCVADGYTYSTLM-HGLCNEGRIDEAVSLLDEMQV 63
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
P+ +A+ ++ G + ++ G P Y + GL ++ ++ +
Sbjct: 64 EGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDK 123
Query: 315 AKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
A L +V+ K +D L+ G V + + EKG + S+L
Sbjct: 124 AMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLIS 183
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
L K K + ++++K + + Y+ ++ LC G+ EA + EMK KG P
Sbjct: 184 GLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTP 243
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
+ Y+SLM + A +W +M + C+ + Y+ILI+ + G+++ AL ++
Sbjct: 244 NSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVW 303
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILS 544
ML +G+ D Y+S++ G C ++ ++FN+ + H+ L +++
Sbjct: 304 KQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVT 354
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 2/212 (0%)
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
V ++D A+ F M ++ V T S L LC + DE V + + F +
Sbjct: 13 VGNVD--QAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNP 70
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
++NV++S LC G L A ++ M KG P+ YNSL+ C + L A L ++
Sbjct: 71 VAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNR 130
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M A+ C N T+ L+ F + G +R+ ++ EKG + +Y+SL+ GL +E
Sbjct: 131 MVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGK 190
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ +++ + V + S + LCR
Sbjct: 191 GEHGMQLWKEMVEKGCKPNTIVYSALIDGLCR 222
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 110/256 (42%), Gaps = 3/256 (1%)
Query: 299 YREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFM 356
Y + GL E RI EA L E+ V G F + N LI ++ D A + M
Sbjct: 38 YSTLMHGLCNEGRIDEAVSLLDEMQVEGTFP-NPVAFNVLISALCKKGDLSRASKLVDNM 96
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
KG VP T ++L LC + K D+ + + + AN + ++ +V GR
Sbjct: 97 FLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRA 156
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
+ V+ ++ KG + Y+SL+ +E +LW +M GC N Y+ L
Sbjct: 157 LDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSAL 216
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I G+ + A M KG P++ TY+SL+ G + ++ A V+ + ++D
Sbjct: 217 IDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDC 276
Query: 537 MLARSILSTFMISLCR 552
S + LC+
Sbjct: 277 NHHEVCYSILINGLCK 292
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 4/182 (2%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y +++ L + + L ++K T +S Y ++ + + KA V+ E+
Sbjct: 213 YSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMT 272
Query: 147 FN-CEDIGPEICNSLLA-VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
N C E+C S+L L +G + AL ++ +M RG++ + + I FC
Sbjct: 273 DNDCNH--HEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQL 330
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ Q + + +++ + V ++++ FC V A +L+ + + C PDFI
Sbjct: 331 VEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITC 390
Query: 265 RI 266
I
Sbjct: 391 DI 392
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 54/294 (18%), Positives = 122/294 (41%), Gaps = 5/294 (1%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+S++ L L +++ S+L ++ NK + + ++ ++ V
Sbjct: 106 VTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVS 165
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ +SL++ L +G ++ ++++ EM +G + +TI + I C K
Sbjct: 166 LEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGK 225
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ L E++ + ++ S ++ G+ + + +A V E+ +C + Y
Sbjct: 226 PDEAKEYLIEMKNKGHT--PNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCY 283
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
I+ G + E +V K+ G+ Y I G + + + +L ++
Sbjct: 284 SILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLC 343
Query: 325 GKFTIDDDVL--NALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ DV+ N L+ + + + S AI N M+++G P T K L
Sbjct: 344 HNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL 397
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 133/561 (23%), Positives = 238/561 (42%), Gaps = 68/561 (12%)
Query: 11 TRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGF 70
T+ SQA+ N T P W+ L+ +L +L SLS + V + + L+ + AL F
Sbjct: 63 TKRSQAMARLIN-TEP---WSHELQSSLAELA--PSLSKTTVLQTLQ--LIRTPAKALHF 114
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNK---ITLDSSVYRFIIP 127
F W + FTH+ SY +++ L SR +NA + + ++ + L + +I
Sbjct: 115 FRWVEAK-GFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIR 173
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIG--PEIC--NSLLAVLASDGYIDNALKMFDEM-SH 182
S Q++ VF +K +IG P + NSLL+++ G A ++FDEM
Sbjct: 174 SYGWAGLFQESIKVFKTMK----EIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDT 229
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKR 241
GV T F + I FC N+ + + E+ + + + V+ ++ G C+ +
Sbjct: 230 YGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFK---CDPDVVTYNTLVDGLCRAGK 286
Query: 242 VEEAFKVLDEL--RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
V+ A V+ + + P+ + Y + + + + E +L + G+ P Y
Sbjct: 287 VKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITY 346
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
I GL CEA++L ++ ++L ++G +
Sbjct: 347 NTLIQGL------CEAQKLDKI---------KEILEGMVG------------------DG 373
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G +P TL+ L K C K +E V++ +S D +Y+V+V LC G R A
Sbjct: 374 GFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRA 433
Query: 420 YGVIQEMKRK-------GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
E+ K G P V+ YN + E C + A++++ Q+ G + + +
Sbjct: 434 EEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-TQDPPS 492
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
Y LI G E L ML + PDA TY +++GL ++ + A + K +
Sbjct: 493 YKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKML 552
Query: 533 NHDVMLARSILSTFMISLCRR 553
+ +I + + +L +
Sbjct: 553 KSSHLPTTAIFHSILAALVEK 573
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/407 (19%), Positives = 163/407 (40%), Gaps = 49/407 (12%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQ-----VKVNKITLDSSVYRFIIPSLI 130
+ PN + + ++Y ++++ + + + S+L + +K NKIT Y +I L
Sbjct: 300 KSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKIT-----YNTLIQGLC 354
Query: 131 QGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFS 188
+ + K + + + I P+ C N+L+ + G ++ A +F++MS V+
Sbjct: 355 EAQKLDKIKEILEGMVGDGGFI-PDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPD 413
Query: 189 TIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKV 248
+ + V + C+ + DE+ ++E +++H
Sbjct: 414 SATYSVLVRSLCQRGDFRRAEEFFDELAEKE-----------ILLHDV------------ 450
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
CKP AY + E G + E V ++ K G + Y+ ILG
Sbjct: 451 -------GCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPS-YKTLILGHCR 502
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
E +L +++ F D + +I G + DP A M++ +PT +
Sbjct: 503 EGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAI 562
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFT--DMESYNV--MVSFLCTSGRLREAYGVI 423
++ L ++ + E + K++ D+ ++ + +VSFLC S +L EA ++
Sbjct: 563 FHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQKML 622
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
K D+ ++++ C+ + A L+ ++ G L
Sbjct: 623 LFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQHRL 669
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 137/553 (24%), Positives = 232/553 (41%), Gaps = 80/553 (14%)
Query: 9 LATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLAL 68
LA ++ +++S+ T P P+L +TL R L R I +L
Sbjct: 57 LAPNLTPSLLSS---TLPTLHQNPILVETLLSHLHRHPHCLDLNTRCITLCIL------- 106
Query: 69 GFFNWASQQPNFTHSPLSYHS-----ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
+ S +P+F H+ I LSL+R + + L V+
Sbjct: 107 --YRLPSPKPSFHILQPILHTTTPTVIFNELSLARNRLNVKTTL-------------VFD 151
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGP--EICNSLLAVLASDGYIDNALKMFDEMS 181
++ + Q + +A N +K N +I P E CNSLL++L I A +++EM
Sbjct: 152 LLLSAYCQFRKPDEALECLNLMKEN--EIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMV 209
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGK 240
++ S + F + I C K + D + E + +V+ +I+G+C
Sbjct: 210 KMNIKSSIVTFNIMINILCREGKWKKAK---DFIGHMEVYGVKPNVVTYNTVINGYCLRG 266
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+ E A K+ ++ + KPD Y + E VL K + G+ P Y
Sbjct: 267 KFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYN 326
Query: 301 EFILG-----------------------------------LIVERRICEAKEL-GEVIVS 324
I G L +E+RI EA+++ E+
Sbjct: 327 ALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREK 386
Query: 325 GKFTIDDDVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
G ++ DV+ I G + + A+ F+ M+EK PT+ T ++L KRN+
Sbjct: 387 G---VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRM 443
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
E E +K D+ +N ++ C +G + A+ +++EM + PD +N+L
Sbjct: 444 SEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTL 503
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
M+ CRE + AKKL D+M G + +YN LIS +S+ G+++ AL +F ML G
Sbjct: 504 MQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGF 563
Query: 502 APDATTYTSLLEG 514
P TY +L++G
Sbjct: 564 DPTLLTYNALIQG 576
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 136/331 (41%), Gaps = 35/331 (10%)
Query: 223 INGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
I S++ ++I+ C+ + ++A + + + KP+ + Y V + L G
Sbjct: 213 IKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAAS 272
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
+ K + + P Y FI L ERRI EA SG VL L+
Sbjct: 273 KIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEA--------SG-------VLCKLL--- 314
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
E G VP T + L C + D+ + +
Sbjct: 315 ----------------ESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVF 358
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN+++ L R+ EA +I+EM+ KG++PDV YN + CR + A L+D+M
Sbjct: 359 TYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEM 418
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
++TY LI F + + A F +++G+ PD + +L++G C N+
Sbjct: 419 VEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNI 478
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
AF++ + N V+ +T M CR
Sbjct: 479 DRAFQLLKEMDNAKVVPDEVTFNTLMQGYCR 509
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 159/379 (41%), Gaps = 9/379 (2%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
+G +PN ++Y++++ L + A + K +K + D Y I
Sbjct: 240 IGHMEVYGVKPNV----VTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFIS 295
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
L + + ++A V ++ + N+L+ + G +D A DEM +RG+
Sbjct: 296 RLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVA 355
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI-IHGFCKGKRVEEAF 246
S + + I ++ + M+ E+R++ + V+ I I+G+C+ ++A
Sbjct: 356 SVFTYNLLIHALFLEKRIEEAEDMIKEMREKG---VEPDVVTYNIQINGYCRCGNAKKAL 412
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
+ DE+ + +P Y + + F + E E KK K G+ P + I G
Sbjct: 413 SLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGH 472
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTL 365
V I A +L + + + K D+ N L+ G A + M E+G P
Sbjct: 473 CVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDH 532
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
+ + L KR + +EV+ + + + + +YN ++ G A +++E
Sbjct: 533 ISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLRE 592
Query: 426 MKRKGLDPDVSFYNSLMEA 444
M+ KG+ PD S Y ++EA
Sbjct: 593 MQSKGITPDDSTYLYVIEA 611
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 6/200 (3%)
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
P A+ N M E +P T ++L L K NK VY+ + + + + ++N+
Sbjct: 163 PDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNI 222
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
M++ LC G+ ++A I M+ G+ P+V YN+++ C A K++ M
Sbjct: 223 MINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKN 282
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+ TYN IS+ + IE A + +LE G+ P+A TY +L++G C + +L AF
Sbjct: 283 LKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAF 342
Query: 526 EVFNKSVNHDVMLARSILST 545
D M+ R I+++
Sbjct: 343 AY------RDEMMNRGIVAS 356
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 6/265 (2%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S +Y+ ++ +L L ++I + ++K+++ + D Y I + N +KA S+F
Sbjct: 356 SVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLF 415
Query: 143 NEVKFNCEDIGP--EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+E+ ++I P E SL+ V + A + F + G+ I F I C
Sbjct: 416 DEMVE--KNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHC 473
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
N + + +L E+ + ++ V ++ G+C+ ++VEEA K+LDE++ R KPD
Sbjct: 474 VNGNIDRAFQLLKEMDNAK--VVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPD 531
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
I+Y + + G + + V + LG P Y I G A+EL
Sbjct: 532 HISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLR 591
Query: 321 VIVSGKFTIDDDVLNALIGSVSSID 345
+ S T DD +I ++ + D
Sbjct: 592 EMQSKGITPDDSTYLYVIEAMKTND 616
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 2/184 (1%)
Query: 349 AIVFFNFMIEKGRVPTLSTL--SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
++F + + R+ +TL L C+ K DE +E ++ N+ E+ N +
Sbjct: 129 TVIFNELSLARNRLNVKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSL 188
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+S L +++ A+ V +EM + + + +N ++ CRE + AK M G
Sbjct: 189 LSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGV 248
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
N+ TYN +I+ + G+ E A ++F M +K + PD TY S + LC+E ++ A
Sbjct: 249 KPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASG 308
Query: 527 VFNK 530
V K
Sbjct: 309 VLCK 312
>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Brachypodium distachyon]
Length = 841
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 206/476 (43%), Gaps = 42/476 (8%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVK-FNCEDIGPEIC--NSLLAVLASDGYIDNAL 174
D+ Y +I AF + +E++ C+ P + N L+ VL DG + +A
Sbjct: 244 DACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQ---PTVVTYNILVNVLCHDGNMVDAR 300
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIH 234
++FDEM G+E +TI F V + + + ++ + + E++ R + + +L
Sbjct: 301 RLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAYAACREMKAR-GLVPDCCTFNILSAG 359
Query: 235 GFCKGKRVEEAF--KVLDEL---RIRECKPDFIAYRI-----VAEEFKLMGSVFEREV-- 282
+ GK V+ A + L E+ RI D + R+ + + +KL+ S E+ V
Sbjct: 360 AYKFGKAVQLAHGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPV 419
Query: 283 -----------------------VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
V K+G+ P + + I+GL + R+ +A+ L
Sbjct: 420 SVAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLL 479
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
E ++ + + + S + A+ ++ M++ G P S LC+ +
Sbjct: 480 EHMICKGYCVGTSFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLD 539
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+E + + ++ + + +YN ++S C G + EA + ++M++ GL PDV N
Sbjct: 540 HVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSN 599
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
L++ C+E L K + M+ SG + ++ TYN +I+ + ++ A+ + ML
Sbjct: 600 ILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLAD 659
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
G PD TY + LC L A ++ ++ V M +T M +C VL
Sbjct: 660 GCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGICSDVL 715
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 186/463 (40%), Gaps = 77/463 (16%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+LL +L G + A K+F EM+ RG S F I FC + L +L V R
Sbjct: 180 ALLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIFNAMILGFCHRGLVHIGLGLLG-VMWR 238
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
N + + +L I G+ + +AF++LDE+R C+P + Y I+ G++
Sbjct: 239 FNVIPDACSYNIL-IKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMV 297
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-------KELG--------EVIV 323
+ + + K+G+ T + + G R+ EA K G ++
Sbjct: 298 DARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILS 357
Query: 324 SGKFTIDDDV--------LNALIGSVSSIDPRSAIV--------------FFNFMIEKGR 361
+G + V L+ + GS S D +V IE+G
Sbjct: 358 AGAYKFGKAVQLAHGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGV 417
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
+++ + L K ++ +EVY V++ ++N ++ LC GRL +A
Sbjct: 418 PVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQL 477
Query: 422 VIQ----------------------------------EMKRKGLDPDVSFYNSLMEACCR 447
+++ +M + G+ PD +++ + CR
Sbjct: 478 LLEHMICKGYCVGTSFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCR 537
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
D + A + + +M G N TYN LIS F VG + AL+L M + G+ PD T
Sbjct: 538 LDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFT 597
Query: 508 YTSLLEGLCQETNLQAA----FEVFNKSVNHDVMLARSILSTF 546
L++G C+E L +++N + DV+ +I++ +
Sbjct: 598 SNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAY 640
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 145/360 (40%), Gaps = 23/360 (6%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+A + +G+ + AL+++ M+ G+ S+ F I C +L +L
Sbjct: 425 NALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLL----- 479
Query: 218 RENSMINGSVIAV---LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
E+ + G + + + + + VE A K D++ +PDFIA+ +
Sbjct: 480 -EHMICKGYCVGTSFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRL 538
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
V E + G P Y I + EA +L + + D
Sbjct: 539 DHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTS 598
Query: 335 NALI------GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC-KRNKSDELVEV 387
N LI G + ++ R F M G P + T + + C ++ S ++ +
Sbjct: 599 NILIDGFCKEGRLDMMNKR-----FLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFM 653
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
K+L A+ D+ +YN+ + LC + L A ++ E+ G P+ YN+LM+ C
Sbjct: 654 NKML-ADGCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGIC- 711
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
D+L A L ++ N T N+ S F + G + AL + E VA D T
Sbjct: 712 SDVLDRAMILTGKLIKMAFQPNTVTVNVFFSHFCKQGFGKRALVWAEKLKEDSVAFDDAT 771
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P+LS ++ L + L + + +V+ ++A + +N M+ C G +
Sbjct: 170 GNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIFNAMILGFCHRGLVHIG 229
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
G++ M R + PD YN L++ A +L D+M SGC + TYNIL++
Sbjct: 230 LGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNV 289
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
G + A RLF M++ G+ + T+ L++G + + A+
Sbjct: 290 LCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAY 335
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%)
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+G EA V+ ++ G P +S +L+ R +RPA K++ +M A G +L
Sbjct: 152 AAGMASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGPRPSLA 211
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+N +I F G + L L M V PDA +Y L++G AF++ ++
Sbjct: 212 IFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDE 270
>gi|15223927|ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g71060, mitochondrial; Flags: Precursor
gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Arabidopsis thaliana]
gi|332197036|gb|AEE35157.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 188/426 (44%), Gaps = 55/426 (12%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSV 106
LSP+L+ V+ L LAL F WA Q F H+ +Y+++++SL +Q I S+
Sbjct: 92 LSPALIEEVLKK-LSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSL 150
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLAS 166
+ +K K+ L + I + + ++A F++++ + N +L L+
Sbjct: 151 VDDMKAKKL-LSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSK 209
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFI--WKFCENAKLGQVLSML--DEV-RKRENS 221
+ +A K+FD+M + E + + + W GQ L++L DEV R+ ++
Sbjct: 210 SRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGW--------GQELNLLRVDEVNREMKDE 261
Query: 222 MINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
V+A +II+ CK K+ EEA + +E+ R CKP
Sbjct: 262 GFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKP--------------------- 300
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+P + I GL E+++ +A E E S F ++ NAL+G+
Sbjct: 301 ------------SPHI--FCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGA 346
Query: 341 VS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
S A + M KG P T + +L + +S E EVY+ +S
Sbjct: 347 YCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE---PT 403
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ +Y +MV C RL A + EMK KG+ P + ++SL+ A C E+ L A + ++
Sbjct: 404 VSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFN 463
Query: 460 QMFASG 465
+M G
Sbjct: 464 EMLDVG 469
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 188/434 (43%), Gaps = 23/434 (5%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
SV QV N + D+ I ++ K ++ NE + P + +L L
Sbjct: 52 SVETQVSANDASQDAER----ICKILTKFTDSKVETLLNEASVK---LSPALIEEVLKKL 104
Query: 165 ASDGYIDNALKMFD-EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
++ G + AL +F + +G + +T + I + + + S++D+++ ++ ++
Sbjct: 105 SNAGVL--ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKK--LL 160
Query: 224 NGSVIAVLIIHGFCKGKRVEEA---FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
+ A LI + + ++V+EA F ++E + DF + + +V +
Sbjct: 161 SKETFA-LISRRYARARKVKEAIGAFHKMEEFGFKMESSDF---NRMLDTLSKSRNVGDA 216
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+ V K +K P Y + G E + E+ + F D +I +
Sbjct: 217 QKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINA 276
Query: 341 -VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ AI FFN M ++ P+ +L L K ++ +E ++ ++ + +
Sbjct: 277 HCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLE 336
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+YN +V C S R+ +AY + EM+ KG+ P+ Y+ ++ R + A +++
Sbjct: 337 APTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQ 396
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
M C + TY I++ F ++ A++++ M KGV P ++SL+ LC E
Sbjct: 397 TM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHEN 453
Query: 520 NLQAAFEVFNKSVN 533
L A E FN+ ++
Sbjct: 454 KLDEACEYFNEMLD 467
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/439 (22%), Positives = 200/439 (45%), Gaps = 24/439 (5%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSH 182
++ SL++ QK F+ V C+ + P++ + + G ++ A+++F +M
Sbjct: 224 LLTSLVRATEFQKCCEAFHVV---CKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEE 280
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR--ENSMINGSVIAVLIIHGFCKGK 240
GV + + + I + + + +++ +R E ++I S++ + G K K
Sbjct: 281 AGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSIL----VKGLTKAK 336
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
R+ +A+ VL E+ + P+ I Y + + GS+ + + G++ ++ Y
Sbjct: 337 RIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 396
Query: 301 EFILGL-------IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFF 353
I G I ER + E +G + G FT + L+ S D SA+ F
Sbjct: 397 TLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFT----SVICLLCSHHMFD--SALRFV 450
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
M+ + P L+ L LCK K + VE++ + D ++ N ++ LC +
Sbjct: 451 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEA 510
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G+L E + + +E+ +G D YN+L+ CC L A D+M G + TY
Sbjct: 511 GKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTY 570
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
+ILI + ++E A++ + + G+ PD TY+ +++G C+ + ++F++ ++
Sbjct: 571 SILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMS 630
Query: 534 HDVMLARSILSTFMISLCR 552
+++ + + + + CR
Sbjct: 631 NNLQPNTVVYNHLIGAYCR 649
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 186/432 (43%), Gaps = 5/432 (1%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++++ L +S + + +++ + Y ++ L + K A+ V E
Sbjct: 288 VTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKE 347
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + N+L+ L G ++ A+++ D M +G+ ++ + I +C++ +
Sbjct: 348 MTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQ 407
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF-IA 263
+L E+ ++ GS +V+ + C + A + + E+ +R P +
Sbjct: 408 ADIAERLLKEMLSIGFNVNQGSFTSVICL--LCSHHMFDSALRFVGEMLLRNMSPGGGLL 465
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+++ K E+ LK K G T + GL ++ E + + I+
Sbjct: 466 TTLISGLCKHGKHSKAVELWLKFLNK-GFLVDTKTSNALLHGLCEAGKLEEGFRIQKEIL 524
Query: 324 SGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
F +D N LI G + A +F + M++KG P T S L + L NK +
Sbjct: 525 GRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVE 584
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E ++ + N D+ +Y+VM+ C + R E + EM L P+ YN L+
Sbjct: 585 EAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLI 644
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
A CR L A +L + M G S N TY LI S + +E A L M +G+
Sbjct: 645 GAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLE 704
Query: 503 PDATTYTSLLEG 514
P+ YT+L++G
Sbjct: 705 PNVFHYTALIDG 716
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 193/446 (43%), Gaps = 13/446 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++K L+ +++I VLK++ + VY +I SLI+ + KA + +
Sbjct: 323 ITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDL 382
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + N+L+ G D A ++ EM G + F I C +
Sbjct: 383 MVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHM 442
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK----GKRVEEAFKVLDELRIRECKPD 260
L + E+ R +M G + +I G CK K VE K L++ + + K
Sbjct: 443 FDSALRFVGEMLLR--NMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTS 500
Query: 261 FIAYRIVAEEFKLM-GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
+ E KL G ++E++ + G Y I G +++ EA
Sbjct: 501 NALLHGLCEAGKLEEGFRIQKEILGR-----GFVMDRVSYNTLISGCCGNKKLDEAFMFM 555
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ +V D+ + LI + +++ AI F+ G +P + T S + CK
Sbjct: 556 DEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKA 615
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+++E +++ + +N+ + YN ++ C SGRL A + ++MK KG+ P+ + Y
Sbjct: 616 ERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATY 675
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
SL++ + AK L ++M G N+ Y LI + ++G++ L M
Sbjct: 676 TSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 735
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAA 524
K V P+ TYT ++ G ++ N+ A
Sbjct: 736 KNVHPNKITYTVMIGGYARDGNVTEA 761
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 199/472 (42%), Gaps = 44/472 (9%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVY---- 122
AL FN S+Q F H+ +Y +IL L+ +A+D VL Q+ ++
Sbjct: 109 ALNIFNMVSEQNGFQHNNATYATILDKLARCNNFHAVDRVLHQMTYETCKFHEGIFVNLM 168
Query: 123 RFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSH 182
+ S + K FS+ V+ E P+ ++ L +L +D A K+
Sbjct: 169 KHFSKSSLHEKLLHAYFSIQPIVR---EKPSPKALSTCLNLLLDSNRVDLARKLLLHAKR 225
Query: 183 RGVEFSTIG-FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
+ F + + C+N L +++E+R E S N + L+ G C+ R
Sbjct: 226 DLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLM-DGLCRNGR 284
Query: 242 VEEAFKVLDELRIRE-CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
V+EAF + +E+ R+ PD + Y ++ F G V++ + G P +Y
Sbjct: 285 VKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYS 344
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKG 360
+ GL C+ GK VL + GS G
Sbjct: 345 ALVDGL------CKV---------GKLEDAKGVLAEIKGS-------------------G 370
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P T ++L LC+ KSDE +E+ + + N D ++NV++ LC G+ EA
Sbjct: 371 LKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEAL 430
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+++++ ++G+ + Y ++ + ++ L+ AK+L M G + T N L+
Sbjct: 431 DMVEKLPQQGVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELLVCL 490
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
+ G ++ A +++E G P T+ L+ +C+E L FE+ ++ V
Sbjct: 491 CKAGMVDDAAVALFDLVEMGFQPGLETWEVLIGLICRERKLLYVFELLDELV 542
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 1/211 (0%)
Query: 347 RSAIVFFNFMIEKGR-VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
+ A F M+ + VP T + L C+ K D V + + +N + ++ +Y+
Sbjct: 286 KEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSA 345
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+V LC G+L +A GV+ E+K GL PD Y SL+ CR A +L ++M +G
Sbjct: 346 LVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENG 405
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
C + T+N+L+ G+ E AL + + ++GV + +Y +L L Q+ L+ A
Sbjct: 406 CQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNSLTQKCELKRAK 465
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
E+ + + + ++ LC+ ++
Sbjct: 466 ELLGLMLRRGFQPHYATSNELLVCLCKAGMV 496
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 345 DPRSAIVFFNFMIEK-GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY----FTD 399
DP+ A+ FN + E+ G +T + + L + N V +VL Y F +
Sbjct: 105 DPQHALNIFNMVSEQNGFQHNNATYATILDKLARCNN---FHAVDRVLHQMTYETCKFHE 161
Query: 400 MESYNVMVSFLCTS--GRLREAYGVIQEMKRKGLDPDV--SFYNSLMEACCREDLLRPAK 455
N+M F +S +L AY IQ + R+ P + N L+++ R DL R K
Sbjct: 162 GIFVNLMKHFSKSSLHEKLLHAYFSIQPIVREKPSPKALSTCLNLLLDSN-RVDLAR--K 218
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA-PDATTYTSLLEG 514
L N+ +NIL+ + G+++ A + M + P+ TY++L++G
Sbjct: 219 LLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDG 278
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS-LCR 552
LC+ ++ AF++F + V+ D ++ + +I+ CR
Sbjct: 279 LCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCR 317
>gi|255583659|ref|XP_002532584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527693|gb|EEF29801.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 895
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 125/509 (24%), Positives = 220/509 (43%), Gaps = 35/509 (6%)
Query: 35 EQTLHQLGLRDSLSPSLVARVINPYLLTHHSLA-LGFFNWASQQPNFTHSPLSYHSILKS 93
E L QLGLR L+ SLV V++ L+ L FF+WA +Q F H+ ++H+I K
Sbjct: 106 ELALSQLGLR--LTESLVLDVLHYGNSKKDVLSCLKFFDWAGRQSGFYHTRATFHAIFKI 163
Query: 94 LSLSR----QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
LS ++ ++ +D+ +K N L Y +I Q A +F +++F
Sbjct: 164 LSKAKLMQLMLDFLDNYMKHRFANH-KLGYGFYSTLIMGYSVAGKPQVALQLFGKMRFLG 222
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
D+ + LL L + D + ++S RG E S I + + FC+
Sbjct: 223 RDLDAFAYHILLNSLVEECCFDAVDDIAKQISIRGFE-SHITHSIVVKSFCKQ------- 274
Query: 210 SMLDEVRKRENSMI------NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
MLDE MI NG+ + +L + FC+ + E+A ++++E R P + A
Sbjct: 275 RMLDEAEAYLRRMILQGESGNGAAVGIL-VGAFCQKGQFEKAGQLIEEFRELRVVPLYPA 333
Query: 264 Y----RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
Y R + ++ KL G++ + +KK P Y + L+ E R+ EA +L
Sbjct: 334 YGVWLRNLVQKGKLDGAL---DFFQQKKTLESYVPEIFHYNALLCRLLKENRLTEACDLL 390
Query: 320 EVIVSGKFTIDDDVLNALIG---SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
++ F+ D +NA + +D A+ +N E G P+ T + L +LC
Sbjct: 391 MEMMEDGFSPDKVTMNAALSFFCKAGMVD--VALDLYNCKSEFGLSPSTMTCNYLINSLC 448
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+ D+ V K S + YF +++++ L G++ + + P S
Sbjct: 449 REGNVDDAYHVLKSSSEHGYFPGKRAFSMLTDALHREGKVEMMNELFFWALERNFIPSDS 508
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
Y+ + A C+ L + ++ TY+ LI F++ + A RL M
Sbjct: 509 MYDKFISALCKARRLEDGYLIHGELNRFNRVAKKSTYSNLIHGFNKFNRGDIAARLLIEM 568
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+KG P T + +++ LC+ + + F
Sbjct: 569 QDKGHLPARTLFRAVIRSLCEMDDPETRF 597
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 161/396 (40%), Gaps = 27/396 (6%)
Query: 172 NALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV-LSMLDEVRKRE--NSMINGSVI 228
+ LK FD + + T I+K AKL Q+ L LD K N +
Sbjct: 136 SCLKFFDWAGRQSGFYHTRATFHAIFKILSKAKLMQLMLDFLDNYMKHRFANHKLGYGFY 195
Query: 229 AVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+ LI+ G+ + + A ++ ++R D AY I L+ S+ E E
Sbjct: 196 STLIM-GYSVAGKPQVALQLFGKMRFLGRDLDAFAYHI------LLNSLVE-ECCFDAVD 247
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGE-------VIVSGKFTIDDDVLNALIGSV 341
+ + I IV + C+ + L E +I+ G+ + + + L+G+
Sbjct: 248 DIAKQISIRGFESHITHSIVVKSFCKQRMLDEAEAYLRRMILQGE-SGNGAAVGILVGAF 306
Query: 342 SSIDPRSAIVFFNFMIEKGR----VPTLSTLSNLSKNLCKRNKSDELVEVYKVL-SANDY 396
+ +IE+ R VP +NL ++ K D ++ ++ + Y
Sbjct: 307 CQ---KGQFEKAGQLIEEFRELRVVPLYPAYGVWLRNLVQKGKLDGALDFFQQKKTLESY 363
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ YN ++ L RL EA ++ EM G PD N+ + C+ ++ A
Sbjct: 364 VPEIFHYNALLCRLLKENRLTEACDLLMEMMEDGFSPDKVTMNAALSFFCKAGMVDVALD 423
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L++ G S + T N LI+ G ++ A + + E G P ++ L + L
Sbjct: 424 LYNCKSEFGLSPSTMTCNYLINSLCREGNVDDAYHVLKSSSEHGYFPGKRAFSMLTDALH 483
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+E ++ E+F ++ + + + S+ F+ +LC+
Sbjct: 484 REGKVEMMNELFFWALERNFIPSDSMYDKFISALCK 519
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 172/442 (38%), Gaps = 51/442 (11%)
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR 183
++I SL + N A+ V + G + L L +G ++ ++F R
Sbjct: 442 YLINSLCREGNVDDAYHVLKSSSEHGYFPGKRAFSMLTDALHREGKVEMMNELFFWALER 501
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
S + FI C+ +L + E+ R N + S + LI HGF K R +
Sbjct: 502 NFIPSDSMYDKFISALCKARRLEDGYLIHGEL-NRFNRVAKKSTYSNLI-HGFNKFNRGD 559
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMG---SVFEREVVLKKKRKLGVAPRTNDYR 300
A ++L E++ + P +R V M + F + ++ R+ P Y
Sbjct: 560 IAARLLIEMQDKGHLPARTLFRAVIRSLCEMDDPETRFFNYLDMQLSRR---DPNCQIYN 616
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEK 359
FI G ++ A+++ E++ + ++ S + S A+ FF+ + ++
Sbjct: 617 FFIDGAGHAKKPDIARKVFEMMQRSGIEPNQSTNILMLQSYLKSERISDALNFFDAVGQR 676
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
++ + + LCK NK D + + + +N +E Y V++ LC++ R A
Sbjct: 677 RKIGR-KLYNTMVVGLCKVNKVDSALSFFLEMQSNGMVPSVECYEVLIMLLCSNKRYSTA 735
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM----------------FA 463
+I ++++ G N L+ + D L A W Q+
Sbjct: 736 ITLITDLEKFGRRVTSFIGNILLLHSLKSDELYDA---WLQVREVQNETSLNLLILGQII 792
Query: 464 SGCSGNLK---------------------TYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+G LK TYN+L+ + S + I+ A LF + +KG
Sbjct: 793 GAFAGRLKLSQQIDNLEEVIEQCFPLDLYTYNMLMRRLS-MSNIDHARELFDRICQKGYE 851
Query: 503 PDATTYTSLLEGLCQETNLQAA 524
P+ TY L+ GL + + A
Sbjct: 852 PNHWTYDILVHGLFKNGRIGEA 873
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 87/487 (17%), Positives = 173/487 (35%), Gaps = 53/487 (10%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+YH +L SL +A+D + KQ+ + + ++ S + + +A +
Sbjct: 228 FAYHILLNSLVEECCFDAVDDIAKQISIRGFE-SHITHSIVVKSFCKQRMLDEAEAYLRR 286
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ E L+ G + A ++ +E V +GV++ + K
Sbjct: 287 MILQGESGNGAAVGILVGAFCQKGQFEKAGQLIEEFRELRVVPLYPAYGVWLRNLVQKGK 346
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L L + + E+ + L+ K R+ EA +L E+ PD +
Sbjct: 347 LDGALDFFQQKKTLESYVPEIFHYNALLCR-LLKENRLTEACDLLMEMMEDGFSPDKVTM 405
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-------KE 317
F G V + K + G++P T I L E + +A E
Sbjct: 406 NAALSFFCKAGMVDVALDLYNCKSEFGLSPSTMTCNYLINSLCREGNVDDAYHVLKSSSE 465
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
G F++ D L+ G V ++ F + +E+ +P+ S LCK
Sbjct: 466 HGYFPGKRAFSMLTDALHR-EGKVEMMNE-----LFFWALERNFIPSDSMYDKFISALCK 519
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ ++ ++ L+ + +Y+ ++ R A ++ EM+ KG P +
Sbjct: 520 ARRLEDGYLIHGELNRFNRVAKKSTYSNLIHGFNKFNRGDIAARLLIEMQDKGHLPARTL 579
Query: 438 YNSLMEACCREDLLRPAKKLWD--QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
+ +++ + C D P + ++ M S N + YN I + + A ++F
Sbjct: 580 FRAVIRSLCEMD--DPETRFFNYLDMQLSRRDPNCQIYNFFIDGAGHAKKPDIARKVFEM 637
Query: 496 MLEKGVAPDATT----------------------------------YTSLLEGLCQETNL 521
M G+ P+ +T Y +++ GLC+ +
Sbjct: 638 MQRSGIEPNQSTNILMLQSYLKSERISDALNFFDAVGQRRKIGRKLYNTMVVGLCKVNKV 697
Query: 522 QAAFEVF 528
+A F
Sbjct: 698 DSALSFF 704
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 100/241 (41%), Gaps = 11/241 (4%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PN + + L S LKS +S +N D+V ++ K+ + +Y ++ L +
Sbjct: 644 EPNQSTNILMLQSYLKSERISDALNFFDAVGQRRKIGR-----KLYNTMVVGLCKVNKVD 698
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
A S F E++ N E L+ +L S+ A+ + ++ G ++ + +
Sbjct: 699 SALSFFLEMQSNGMVPSVECYEVLIMLLCSNKRYSTAITLITDLEKFGRRVTSFIGNILL 758
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
+ K ++ +VR+ +N +I II F ++ + L+E+ I +
Sbjct: 759 ---LHSLKSDELYDAWLQVREVQNETSLNLLILGQIIGAFAGRLKLSQQIDNLEEV-IEQ 814
Query: 257 CKP-DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
C P D Y ++ + RE+ + +K G P Y + GL RI EA
Sbjct: 815 CFPLDLYTYNMLMRRLSMSNIDHARELFDRICQK-GYEPNHWTYDILVHGLFKNGRIGEA 873
Query: 316 K 316
+
Sbjct: 874 R 874
>gi|297827231|ref|XP_002881498.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327337|gb|EFH57757.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 756
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 116/524 (22%), Positives = 230/524 (43%), Gaps = 27/524 (5%)
Query: 28 RKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSY 87
R WT L+ ++ L SLV V++ H AL FF W + H ++
Sbjct: 97 RAWTTRLQNSIRDL--VPEWDHSLVYNVLHGAKKLEH--ALQFFRWTERSGLIRHDRDTH 152
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
++K L +++N +L + + D ++ +I S + Q++ +F ++K
Sbjct: 153 MKMIKMLGEVQKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMK- 211
Query: 148 NCEDIGPEIC----NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
D+G E N+L V+ G A + F++M GVE + + + +W F +
Sbjct: 212 ---DLGVERTIKSYNTLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSL 268
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+L L D+++ R + +V II+G+C+ K+++EA K+ E++ +P +
Sbjct: 269 RLETALRFFDDMKTR--GISPDAVTYNTIINGYCRFKKMDEAEKLFVEMKGNNSEPSVVT 326
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + + + V + + ++ R G+ P Y + GL ++ EAK + + ++
Sbjct: 327 YTTMIKGYLSVDRVDDGLRIFEEMRSFGIEPNATTYSTLLPGLCDVGKMVEAKNILKNMM 386
Query: 324 SGKFTIDDD--VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR--- 378
+ D+ L L+ + D +A M L +N CK
Sbjct: 387 AKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAY 446
Query: 379 NKS----DELVEVYKVLSANDYFTDME--SYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
N++ D L+E +L D +ME +YN ++ +LC +G+ +A + +++ ++G+
Sbjct: 447 NRAIKLLDTLIEKEIILRHQDTL-EMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ 505
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
D N+L+ +E + ++ M G Y +LI + GE A
Sbjct: 506 -DQDALNNLIRGHAKEGNPESSYEILKIMSRRGVPREANAYELLIKSYMSKGEPGDAKTA 564
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+M+E G PD+ + S++E L ++ +Q A V ++ +V
Sbjct: 565 LDSMVEDGHVPDSALFRSVIESLFEDGRVQTASRVMMIMIDKNV 608
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 78/188 (41%), Gaps = 35/188 (18%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D + + V++ +G ++E+ + Q+MK G++ + YN+L + R AK+ +
Sbjct: 183 DEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNTLFKVILRRGRYMMAKRYF 242
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY---------- 508
++M + G TYN+++ F +E ALR F +M +G++PDA TY
Sbjct: 243 NKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFDDMKTRGISPDAVTYNTIINGYCRF 302
Query: 509 -------------------------TSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
T++++G + +F + + + +
Sbjct: 303 KKMDEAEKLFVEMKGNNSEPSVVTYTTMIKGYLSVDRVDDGLRIFEEMRSFGIEPNATTY 362
Query: 544 STFMISLC 551
ST + LC
Sbjct: 363 STLLPGLC 370
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D +++ M+ L +L A ++ +M KG+ D + L+E+ + +++ + K++
Sbjct: 148 DRDTHMKMIKMLGEVQKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIF 207
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M G +K+YN L G A R F+ M+ +GV P TY +L G
Sbjct: 208 QKMKDLGVERTIKSYNTLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLS 267
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L+ A F+ + +T + CR
Sbjct: 268 LRLETALRFFDDMKTRGISPDAVTYNTIINGYCR 301
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 51/275 (18%), Positives = 112/275 (40%), Gaps = 25/275 (9%)
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR---ENSMINGSVIAVLIIHGFCKGKR 241
+E + I C N + + + ++ KR + +N +I G K
Sbjct: 469 LEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNN------LIRGHAKEGN 522
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
E ++++L + R + AY ++ + + G + + L + G P + +R
Sbjct: 523 PESSYEILKIMSRRGVPREANAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSALFRS 582
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDD------VLNALI--GSVSSIDPRSAIVFF 353
I L + R+ A + +++ I+D+ +L AL+ G V A+
Sbjct: 583 VIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEE-----ALGRI 637
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
+ + + G L +L ++ L ++ K+ +++ D D SY+ ++ L +
Sbjct: 638 DLLNQNGHTADLDSLLSV---LSEKGKTIAALKLLDFGLERDLSLDFSSYDKVLDALLGA 694
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
G+ AY V+ ++ KG D + L+++ +E
Sbjct: 695 GKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQE 729
>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
Length = 826
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 109/494 (22%), Positives = 213/494 (43%), Gaps = 86/494 (17%)
Query: 65 SLALGFFNWASQQPNFTH--SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVY 122
L L F WAS++ +F S S+LK L+ R ++++L+ +K +
Sbjct: 78 GLGLKLFEWASKRSDFNDLLDGFSCSSLLKLLARCRVFVEVENLLETMKCKDLAPTREAL 137
Query: 123 RFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEM 180
F++ + + +A +++ + ++ + P++ CN+LL L ++ A K+++EM
Sbjct: 138 SFVVGAYVDSGLVNRALELYH-IAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEM 196
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
KR+ N SV +++ G CK +
Sbjct: 197 V-----------------------------------KRDGCWDNYSV--CIMVRGLCKER 219
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+VEE K++++ + C P+ + Y + + + G V + K+ + G P T Y
Sbjct: 220 KVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYG 279
Query: 301 EFILGLIVERRICEAKELGEVIVSGK---FTIDDDVLNALIGSVSSIDPRSAIVFFNFMI 357
I GL + C K + ++V K ++ V N+++ A + I
Sbjct: 280 IMINGLC---KKCNFKAVDGLLVEMKERGVDVNVQVYNSIV---------DAQIKHGCKI 327
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
E G+ TL +++N C+ D+ +YN ++S C G++
Sbjct: 328 EVGK-----TLRWITENGCE--------------------PDITTYNTLISGSCRDGKVH 362
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
EA +++ ++GL P+ Y L+ C++ A L+ M G +L Y L+
Sbjct: 363 EAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALV 422
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA----FEVFNKSVN 533
GE++ AL + M+E+GV PDA Y L+ GLC++ L AA E+ +++++
Sbjct: 423 HGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLS 482
Query: 534 HDVMLARSILSTFM 547
D ++ +++ F+
Sbjct: 483 LDAFVSATLVDGFI 496
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 188/461 (40%), Gaps = 8/461 (1%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y++++ + + + K++K+ + Y +I L + N + + E+K
Sbjct: 243 YNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMK 302
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
D+ ++ NS++ G K ++ G E + I C + K+
Sbjct: 303 ERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVH 362
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ +L+ KR + + +IH +CK + AF + + + D +AY
Sbjct: 363 EAEELLEHAIKR--GLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGA 420
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ G V V K + GV P N Y + GL + R+ AK L ++
Sbjct: 421 LVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQN 480
Query: 327 FTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
++D V L+ G + A F I KG P + + + K CK ++ +
Sbjct: 481 LSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDAL 540
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
+ + D+ D +Y+ ++ L A + +M ++ P+V Y SL+
Sbjct: 541 TCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGF 600
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
CR A+K +++M +SG N+ TY ILI F + G+I A F ML P+
Sbjct: 601 CRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPND 660
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
T+ L+ GL NL A V NK+ N + + S++ F
Sbjct: 661 VTFNYLINGL--TNNLATA--VSNKA-NESLEIKASLMMDF 696
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 35/230 (15%)
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
KG +P + + L KR + ++K L + E+Y +M++ LC +
Sbjct: 234 KGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKA 293
Query: 419 AYGVIQEMKRKGLD-----------------------------------PDVSFYNSLME 443
G++ EMK +G+D PD++ YN+L+
Sbjct: 294 VDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLIS 353
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
CR+ + A++L + G S N +Y LI + + G+ A LF M EKG
Sbjct: 354 GSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPL 413
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
D Y +L+ GL + A V +K V V+ ++ + M LC++
Sbjct: 414 DLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKK 463
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/422 (18%), Positives = 172/422 (40%), Gaps = 26/422 (6%)
Query: 15 QAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWA 74
+IS S R + LLE + + LSP+ ++ ++ L F+
Sbjct: 349 NTLISGSCRDGKVHEAEELLEHAI-----KRGLSPNKLSYTPLIHVYCKQGKCLRAFDLF 403
Query: 75 SQQPNFTHSPL---SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQ 131
H PL +Y +++ L + +++ +V ++ + D++VY ++ L +
Sbjct: 404 IGMTEKGH-PLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCK 462
Query: 132 GKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
A + E+ + + +L+ G +D A K+F+ +G++ +G
Sbjct: 463 KGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVG 522
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ I +C+ + L+ + ++ ++S II G+ K + A K+ +
Sbjct: 523 YNAMIKGYCKFGMMNDALTCVQRMKDGDHS--PDEFTYSTIIDGYVKQNDLHNALKLFGQ 580
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ ++CKP+ + Y + F G E ++ R G+ P Y I E +
Sbjct: 581 MVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGK 640
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVS-------------SIDPRSAIV--FFNFM 356
I +A E+++ + +D N LI ++ S++ +++++ FF M
Sbjct: 641 ISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTM 700
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
I G ++ +++ LC + +++ ++ F D S+ +V LC GR
Sbjct: 701 ISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRS 760
Query: 417 RE 418
+E
Sbjct: 761 KE 762
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 178/379 (46%), Gaps = 17/379 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L+ G ++ A ++ +M G+E S + I +CE ++ + + +E+
Sbjct: 241 NVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLS 300
Query: 218 RENSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
R G+V V+ I++G CK RV +A K+LD + + PD ++Y + +
Sbjct: 301 R------GAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTR 354
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
+G++ E ++ + R +AP Y I GL + A L + ++ K D DV
Sbjct: 355 LGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMI--KHGPDPDV 412
Query: 334 LNALI---GSVSSIDPRSAIVFFNFMIEKGRVPT-LSTLSNLSKNLCKRNKSDELVEVYK 389
G + A F+ M+ +G P + ++ + L K + + +
Sbjct: 413 FTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGEL-KLGDPSKAFGMQE 471
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+ A + D+ +YNV + L G L+EA ++++M GL PD Y S++ A
Sbjct: 472 EMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAG 531
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
LR A+ L+ +M + G ++ TY +LI ++ G ++ A+ F M EKGV P+ TY
Sbjct: 532 HLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYN 591
Query: 510 SLLEGLCQETNLQAAFEVF 528
+L+ GLC+ + A+ F
Sbjct: 592 ALINGLCKVRKMDQAYNFF 610
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 118/516 (22%), Positives = 213/516 (41%), Gaps = 108/516 (20%)
Query: 49 PSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLS----------- 97
P L+ RV+N + +AL FF WA +Q F S +SY IL L+ +
Sbjct: 47 PKLLVRVLNT-VRNRPVVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVME 105
Query: 98 -----RQINAIDSVLKQVKVN----KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
+ N + V+ +V+ K+ LD ++ ++ SL+ +K VF K
Sbjct: 106 KVVSVKMENGVIDVVSSSEVSMPSVKLILDLLLWIYVKKSLL-----EKCLLVF--YKMV 158
Query: 149 CEDIGPEI--CNSLLAVLAS-DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + P++ CN +L +L D ID A ++++ M G+ + + +
Sbjct: 159 SKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYN------------ 206
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+MLD FCK V+EA ++L +++ C P+ + Y
Sbjct: 207 ----TMLDS---------------------FCKKGMVQEALQLLFQMQAMGCSPNDVTYN 241
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
++ G + + + +++ +LG+ Y I G + +I EA LGE
Sbjct: 242 VLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEE---- 297
Query: 326 KFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
M+ +G VPT+ T + + LCK + +
Sbjct: 298 ------------------------------MLSRGAVPTVVTYNTIMYGLCKWGRVSDAR 327
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
++ V+ + D+ SYN ++ G + EA+ + E++ + L P V YN+L++
Sbjct: 328 KLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGL 387
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
CR L A +L D+M G ++ T+ + F ++G + A LF ML +G+ PD
Sbjct: 388 CRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDR 447
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
Y + + G + + AF + + MLAR
Sbjct: 448 FAYITRIVGELKLGDPSKAFGM------QEEMLARG 477
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/472 (22%), Positives = 204/472 (43%), Gaps = 23/472 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+++L S + +L Q++ + + Y ++ L ++A + +
Sbjct: 203 VTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQD 262
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ ++ + L+ G I+ A ++ +EM RG + + + ++ C K
Sbjct: 263 MLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLC---K 319
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLI-----IHGFCKGKRVEEAFKVLDELRIRECKP 259
G+V + RK + M+N +++ L+ I+G+ + + EAF + ELR R P
Sbjct: 320 WGRV----SDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAP 375
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKL---GVAPRTNDYREFILGLIVERRICEAK 316
+ Y + + +G + +V ++ K ++ G P + F+ G + AK
Sbjct: 376 SVVTYNTLIDGLCRLGDL---DVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAK 432
Query: 317 ELGEVIVSGKFTIDD-DVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
EL + +++ D + ++G + DP A M+ +G P L T + L
Sbjct: 433 ELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGL 492
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
K E E+ K + N D +Y ++ +G LR+A + EM KG+ P V
Sbjct: 493 HKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSV 552
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y L+ + L+ A + +M G N+ TYN LI+ +V +++ A F
Sbjct: 553 VTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAE 612
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSIL 543
M KG++P+ TYT L+ C + Q A ++ ++ + D RS+L
Sbjct: 613 MQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLL 664
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 101/200 (50%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
+N M+E G PT+ T + + + CK+ E +++ + A + +YNV+V+ L
Sbjct: 190 YNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSH 249
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
SG + +A +IQ+M R GL+ V Y+ L+ C + + A +L ++M + G + T
Sbjct: 250 SGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVT 309
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YN ++ + G + A +L M+ K + PD +Y +L+ G + N+ AF +F +
Sbjct: 310 YNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELR 369
Query: 533 NHDVMLARSILSTFMISLCR 552
+ + +T + LCR
Sbjct: 370 YRSLAPSVVTYNTLIDGLCR 389
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
RE Y V+ E G+ P V YN+++++ C++ +++ A +L QM A GCS N TYN+L
Sbjct: 187 REVYNVMVEC---GICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVL 243
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
++ S GE+E A L +ML G+ TY L+ G C++ ++ A + + ++
Sbjct: 244 VNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGA 303
Query: 537 MLARSILSTFMISLCR 552
+ +T M LC+
Sbjct: 304 VPTVVTYNTIMYGLCK 319
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 88/209 (42%), Gaps = 2/209 (0%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMF 177
D Y I L + N ++A + ++ +N S++ G++ A +F
Sbjct: 481 DLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALF 540
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFC 237
EM +G+ S + + V I + +L L++L E + + +I+G C
Sbjct: 541 LEMLSKGIFPSVVTYTVLIHSYAVRGRLK--LAILHFFEMHEKGVHPNVITYNALINGLC 598
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K +++++A+ E++ + P+ Y I+ E +G E + K + P +
Sbjct: 599 KVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSC 658
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGK 326
+R + L + ++ + L VI +G+
Sbjct: 659 THRSLLKHLNKDYKLHVVRHLENVIAAGE 687
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 71/156 (45%), Gaps = 21/156 (13%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
SY+V++ L +G +R AY V++++ V N +++ ++ P+ KL
Sbjct: 83 SYSVILDILARNGLMRSAYCVMEKVV------SVKMENGVIDVVSSSEVSMPSVKL---- 132
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL-CQETN 520
++L+ + + +E L +F+ M+ KG+ PD +L L ++ N
Sbjct: 133 ----------ILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNN 182
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+ A EV+N V + +T + S C++ ++
Sbjct: 183 IDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMV 218
>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
Length = 618
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 182/408 (44%), Gaps = 20/408 (4%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
++ +L Q +A SVF ++ E CN++L L + ++FDEM RG
Sbjct: 112 LVIALSQMALPDEALSVFGRLR---ELPALPACNAILDGLVKAHMLARVWELFDEMLGRG 168
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGFCKGKRVE 243
+ S + + I + + + D++ R I+ +V+ +I+ C+ +
Sbjct: 169 MVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARR---IDPNVVTYTTMIYALCEEDCIG 225
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE------VVLKKKRKLGVAPRTN 297
+A + E++ +P+ Y LM S F+R+ V K G+ P
Sbjct: 226 DAEGLFLEMKEAGMRPNLYTYN------ALMSSHFKRDNIKHALVFYYDLLKCGLVPNDV 279
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFM 356
+ I GL RI EAK + + + V N+LI G+ S + A+ FF +
Sbjct: 280 IFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEI 339
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
I K P T S + + LC + +V+ + + +YNV++ C SG L
Sbjct: 340 IRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNL 399
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
EA M G++P+V Y+SL++ + + A ++ +M A G N+ TY L
Sbjct: 400 DEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTAL 459
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
I ++ G+++ A L M EKG+ +A T + L++GLC+E +Q A
Sbjct: 460 IHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDA 507
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 133/306 (43%), Gaps = 1/306 (0%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I+ G K + +++ DE+ R P + Y + + G V + V +
Sbjct: 144 ILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARR 203
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAI 350
+ P Y I L E I +A+ L + + NAL+ S D + A+
Sbjct: 204 IDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHAL 263
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
VF+ +++ G VP + L LCK N+ E ++ + + + YN ++
Sbjct: 264 VFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGA 323
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
SG +EA QE+ RK L PD + ++ C ++ A + + M SG + N
Sbjct: 324 FRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNA 383
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
YN+LI ++ + G ++ AL M E GV P+ TY+SL++G + ++ A ++ +
Sbjct: 384 AAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTE 443
Query: 531 SVNHDV 536
V V
Sbjct: 444 MVAKGV 449
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 94/183 (51%), Gaps = 3/183 (1%)
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
P A+ F + E +P L + + L K + + E++ + + +YN
Sbjct: 122 PDEALSVFGRLRE---LPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNT 178
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+++ G + +A+ V +M + +DP+V Y +++ A C ED + A+ L+ +M +G
Sbjct: 179 LINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAG 238
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
NL TYN L+S + I+ AL ++++L+ G+ P+ +T+L++GLC+ + A
Sbjct: 239 MRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAK 298
Query: 526 EVF 528
+F
Sbjct: 299 NIF 301
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 91/445 (20%), Positives = 178/445 (40%), Gaps = 66/445 (14%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSH 182
I+ L++ + + +F+E+ + P + N+L+ G + A +++D+M
Sbjct: 144 ILDGLVKAHMLARVWELFDEML--GRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVA 201
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR-------------------KREN--- 220
R ++ + + + I+ CE +G + E++ KR+N
Sbjct: 202 RRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKH 261
Query: 221 -----------SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR-IVA 268
++ VI +I G CK R+ EA + ++ E P Y ++
Sbjct: 262 ALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIH 321
Query: 269 EEFKLMGS----VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG----- 319
F+ + F +E++ K+ R EF ++V R +C+ ++
Sbjct: 322 GAFRSGYAQEALAFFQEIIRKELRP----------DEFTCSIVV-RGLCDGGQMQVATRF 370
Query: 320 -EVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
EV+ ++ N LI S + A+V M E G P + T S+L K
Sbjct: 371 LEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSK 430
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ + + +Y + A ++ +Y ++ +G + A+ + +EM+ KG+ +
Sbjct: 431 NGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAIT 490
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCS------GNLKTYNILISKFSEVGEIEGALR 491
+ L++ CRE+ ++ A + + S N TY LI G+ A
Sbjct: 491 VSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACH 550
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLC 516
F M + G+ PD TYT ++ GLC
Sbjct: 551 FFSCMRDSGMVPDRFTYTLVIRGLC 575
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 6/152 (3%)
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N ++ L + L + + EM +G+ P V YN+L+ AC + + A ++WDQM A
Sbjct: 142 NAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVA 201
Query: 464 SGCSGNLKTYNILISKFSE---VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
N+ TY +I E +G+ EG LF M E G+ P+ TY +L+ + N
Sbjct: 202 RRIDPNVVTYTTMIYALCEEDCIGDAEG---LFLEMKEAGMRPNLYTYNALMSSHFKRDN 258
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++ A + + ++ I +T + LC+
Sbjct: 259 IKHALVFYYDLLKCGLVPNDVIFTTLIDGLCK 290
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 96/227 (42%), Gaps = 12/227 (5%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQG--K 133
QQ + +Y+ ++ S ++ ++++ +++++ ++ +V + SLI G K
Sbjct: 375 QQSGIALNAAAYNVLIDEYCKSGNLD--EALVTCTRMSEVGVEPNVVTY--SSLIDGHSK 430
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
N + ++ + + + P + +L+ A +G +D A + EM +G+ + I
Sbjct: 431 NGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAIT 490
Query: 192 FGVFIWKFCENAKLGQVLSMLDEV----RKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
V + C ++ + + E + +N I SV + +I+G + EA
Sbjct: 491 VSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACH 550
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
+R PD Y +V ++G V ++ K+GV P
Sbjct: 551 FFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKP 597
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 171/374 (45%), Gaps = 11/374 (2%)
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
F + V + C +L + +L E+ +++ M + +H CK +V EA
Sbjct: 16 FDNYTYFVLVRAHCLAGELQAAMDLLREM-EQQPGMAPTPSMYNFFVHALCKSGKVPEAM 74
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
+V+ ++ CKPD + + + G + E + VL + + G A Y I GL
Sbjct: 75 EVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK-GRVPT 364
R EA + + + + T D NA+I G S + A F M ++ G P
Sbjct: 135 SSAGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191
Query: 365 LSTLSNLSKNLCKRN---KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
T S L LCK + K+DEL++ +++ D + ++N +V C + L A
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQ--EMIGRKDCCASVVAFNTLVDGYCKAQDLDRARE 249
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
++ M G PDV Y+++++ CR + L ++M + GC ++ TY +L++
Sbjct: 250 LLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLC 309
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
+ G++ A RL MLE G P+A TY+ + +GLC+ L A ++ + +
Sbjct: 310 KAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVV 369
Query: 542 ILSTFMISLCRRVL 555
T ++S+ +R+L
Sbjct: 370 AFETLLLSVKKRLL 383
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/445 (20%), Positives = 188/445 (42%), Gaps = 79/445 (17%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNK-ITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y ++++ L+ ++ A +L++++ + S+Y F + +L + +A V
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 145 VKFN-CEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+K C+ P++ N+L+A L G +D A ++ DEM G + + + I
Sbjct: 80 MKDGACK---PDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ G+ + ++ + ++ + IIHGFCK ++ A+ L+E+
Sbjct: 137 AGRSGEAVLVMQGMTTTPDTQTYNA-----IIHGFCKSGEIDRAYGFLEEM--------- 182
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
K++ G +P T Y I GL C++ L +
Sbjct: 183 -------------------------KQRAGCSPDTFTYSILINGL------CKSSNLRKA 211
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
D++L +IG D +++V FN +++ CK
Sbjct: 212 ---------DELLQEMIGRK---DCCASVVAFNTLVD---------------GYCKAQDL 244
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
D E+ + + D+ +Y+ ++ LC G + + + ++++M +G PDV Y L
Sbjct: 245 DRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVL 304
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ C+ + A +L +M GC+ N TY+++ ++ +++ A L ++ +KG
Sbjct: 305 VTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGR 364
Query: 502 APDATTYTSLLEGLCQETNLQAAFE 526
D + +LL + + +AAF+
Sbjct: 365 VTDVVAFETLLLSVKKRLLDRAAFQ 389
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 180/405 (44%), Gaps = 5/405 (1%)
Query: 152 IGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM 211
IG + + ++ LA G + AL++F+ M S + + V I C + G+ L +
Sbjct: 8 IGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDL 67
Query: 212 LDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
+ KRE + +I G C E A K+L E+R + + Y + +
Sbjct: 68 FQSM-KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSL 126
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
E VL++ G P + + G + +A+E+ + +V + D+
Sbjct: 127 VKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDN 186
Query: 332 DVLNALIGSVSSI---DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
+ LI ++ I D I+ M G VP + T S L LC+ + ++ +EV+
Sbjct: 187 VSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVF 246
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+ + +Y +++ LC + ++ +A + ++M + + PD YNSL+ C+
Sbjct: 247 GSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKR 306
Query: 449 DLLRPAKKLWDQM-FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+ A+KL+ +M +G + T+N LI F ++G++ A L M KG+A D T
Sbjct: 307 GSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCT 366
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
Y L+ GL + T L A EV+ + +L +F+ LC+
Sbjct: 367 YRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCK 411
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 188/428 (43%), Gaps = 17/428 (3%)
Query: 114 KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYID 171
K + Y F++ SL + +A VF +K E P + N L+ + G
Sbjct: 5 KCAIGGDAYDFVVQSLAKAGMLAQALEVFETMK--SESCVPSLVTYNVLINSRCNAGEFG 62
Query: 172 NALKMFDEMS-HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE---NSMINGSV 227
AL +F M + VE + I C + +L E+R + N S+
Sbjct: 63 KALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSI 122
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
I L+ K + EE++KVL+E+ C PD A+ V + F ++ + V +
Sbjct: 123 IKSLV-----KEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 177
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEA-KELGEVIVSGKFTIDDDV-LNALI-GSVSSI 344
+ G P Y I GL ++ E+ K L E+ + + + + + LI G +
Sbjct: 178 VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTG 237
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
+ A+ F M+E G P T + L LC+ K + E+++ ++ D +YN
Sbjct: 238 ELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYN 297
Query: 405 VMVSFLCTSGRLREAYGVIQEMKR-KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+++ C G + EA + +EM GL P + +N+L++ C+ L A +L +M
Sbjct: 298 SLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGT 357
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G + + TY ILI+ S +++ AL ++ M EK D + S + GLC+ N+
Sbjct: 358 KGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQ 417
Query: 524 AFEVFNKS 531
A+ VF +
Sbjct: 418 AYAVFEAT 425
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/437 (20%), Positives = 170/437 (38%), Gaps = 51/437 (11%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL F ++ +Y++++ L S +L +++ I + Y II
Sbjct: 64 ALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSII 123
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRG 184
SL++ ++++ V E+ P++ N ++ A ++ A +++ M G
Sbjct: 124 KSLVKEAKPEESYKVLEEMM--AAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESG 181
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
+ + + + I + KL + L +L E+ R + + +IHG C+ +E+
Sbjct: 182 YKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEK 241
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A +V GS+ E G P Y I
Sbjct: 242 ALEVF-------------------------GSMLE----------AGCKPNKYTYTTLIA 266
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRSAIVFFNFMIEKGR 361
GL ++ +A+EL E + D N+LI S+D + ++ G
Sbjct: 267 GLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMD-EAEKLYREMSGGAGL 325
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
PT+ T + L CK K E+ + D +Y ++++ L + +L EA
Sbjct: 326 QPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALE 385
Query: 422 VIQEMKRKG--LDP--DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
V ++M+ K LDP VSF L C+ + A +++ SG N +T+ IL
Sbjct: 386 VYKQMREKKFLLDPVSCVSFVGGL----CKTGNIDQAYAVFEATRKSGAVPNPETFRILS 441
Query: 478 SKFSEVGEIEGALRLFH 494
++G +E A +L
Sbjct: 442 ESLIKLGRVEDAQKLME 458
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 133/331 (40%), Gaps = 47/331 (14%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV------AEEFKLMGSVFEREVVL 284
++ K + +A +V + ++ C P + Y ++ A EF +F+
Sbjct: 15 FVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQ----- 69
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
KR+ V P Y I GL SS
Sbjct: 70 SMKREKRVEPDRWTYNTLISGL----------------------------------CSSG 95
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
+ A + M +K + T S++ K+L K K +E +V + + A D+ ++N
Sbjct: 96 NTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFN 155
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF-- 462
++ S + +A V Q M G PD Y+ L+ + L + K+ +M
Sbjct: 156 GVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMR 215
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
A+G N+ T++ LI GE+E AL +F +MLE G P+ TYT+L+ GLC+ +
Sbjct: 216 AAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVI 275
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
A E+F K + ++ + C+R
Sbjct: 276 QARELFEKMTQACIPPDAVAYNSLIAGYCKR 306
>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 108/487 (22%), Positives = 211/487 (43%), Gaps = 25/487 (5%)
Query: 82 HSPLSYHSILKSL----SLSRQINAIDSVLKQ-VKVNKITLDSSVYRFIIPSLIQG--KN 134
H SY+ +L L S+ + D + K V+ + +T ++ F++ L+ G K
Sbjct: 304 HDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKV 363
Query: 135 TQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
QK + + P++ +L+ G I+ ALK+ E RG + + I +
Sbjct: 364 VQKML---------LQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFY 414
Query: 193 GVFIWKFCENAKLGQVLSMLDEVR--KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD 250
+ + C+ ++ + L++ DE+ + E I S++ IHG CK V+ A+++ +
Sbjct: 415 NMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSIL----IHGLCKEGFVQRAYQLYE 470
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
++R++ P A R V G++ E ++ + Y I G +
Sbjct: 471 QMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLD 530
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
I EA +L ++ T N LI G D A + KG VP++ T +
Sbjct: 531 GIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYT 590
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
L C+ E+ + AN +Y V++ LC ++ E+ +++ M K
Sbjct: 591 TLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAK 650
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
GL PD YN++++ C+ + A +L++ M C TY +LI+ G+++
Sbjct: 651 GLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDV 710
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
R+ ++ ++ + TY ++++ C + + A FN+ + +++ S +
Sbjct: 711 DRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINR 770
Query: 550 LCRRVLI 556
LC+R LI
Sbjct: 771 LCKRGLI 777
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 103/468 (22%), Positives = 201/468 (42%), Gaps = 17/468 (3%)
Query: 93 SLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQG-KNTQKAFSVFNEVKFNCED 151
+ + SR D++ K+ + +SV + SL+ ++T + V+NE+K +
Sbjct: 177 AFAYSRHEMIHDALFVIAKMKDLNFQASVPTY--NSLLHNMRHTDIMWDVYNEIKVSGAP 234
Query: 152 IGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM 211
+ L+ L +++A+ + S++ V S + + KFC+ + +
Sbjct: 235 QSECTTSILIHGLCEQSKLEDAISFLHD-SNKVVGPSIVSINTIMSKFCK-------VGL 286
Query: 212 LDEVRKR-----ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+D R +N +++ S +++HG C ++EA D++ +PD + Y
Sbjct: 287 IDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNT 346
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+A+ F L+G + V++K G+ P Y I G I EA +L + +S
Sbjct: 347 LAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRG 406
Query: 327 FTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
F ++ N L+ + + A+ F+ M P S L LCK
Sbjct: 407 FKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAY 466
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
++Y+ + F + ++ L +G + EA R L DV YN +++
Sbjct: 467 QLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGY 526
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
R D + A +L+ +M G + ++ T+N LI+ F G++ A ++ + KG+ P
Sbjct: 527 VRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSV 586
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
TYT+L+ C+ N+Q F ++ + V+ + + LCR+
Sbjct: 587 VTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQ 634
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/478 (20%), Positives = 193/478 (40%), Gaps = 38/478 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+++ K L ++ V++++ + + D Y +I Q N ++A + E
Sbjct: 342 VTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQE 401
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ N LL+ L G I+ AL +FDEM +E I + + I C+
Sbjct: 402 TLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGF 461
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ + + +++R + + + AVL+ G K + EA D + D + Y
Sbjct: 462 VQRAYQLYEQMRLKRKFPHHFAQRAVLL--GLFKNGNISEARNYFDTWTRMDLMEDVVLY 519
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
I+ + + + + E + K + G+ P + I G + EA+++ EVI
Sbjct: 520 NIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRL 579
Query: 325 GKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
L+ + + + + F + M VPT T + L K LC++NK E
Sbjct: 580 KGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHE 639
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP-DVSF----- 437
+++ + + A D +YN ++ C + +A + M DP V++
Sbjct: 640 SLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLIN 699
Query: 438 -----------------------------YNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
Y ++++A C + + A ++QM A G
Sbjct: 700 ALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVI 759
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+++ Y+ +I++ + G I A F ML +GV PD ++L Q+ N + FE
Sbjct: 760 SIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFE 817
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/442 (18%), Positives = 183/442 (41%), Gaps = 16/442 (3%)
Query: 56 INPYLLTHHSLALGFFNWASQQP-----------NFTHSPLSYHSILKSLSLSRQINAID 104
+NP L+T+ +L G + + F + + Y+ +L L +I
Sbjct: 372 LNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEAL 431
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
++ +++ ++ D VY +I L + Q+A+ ++ +++ + ++L L
Sbjct: 432 TLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGL 491
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
+G I A FD + + + + + I + + + + + ++ +R I
Sbjct: 492 FKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERG---IT 548
Query: 225 GSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
SV+ +I+GFC+ + EA K+L+ +R++ P + Y + + +G++ E
Sbjct: 549 PSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHF 608
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS-VS 342
L + V P Y I GL + ++ E+ +L E + + D N +I
Sbjct: 609 LHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCK 668
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
+ A+ +N M+ PT T L LC ++ + + + +
Sbjct: 669 GKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXT 728
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y ++ C G++ +A G +M KG + Y++++ C+ L+ AK + M
Sbjct: 729 YMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMML 788
Query: 463 ASGCSGNLKTYNILISKFSEVG 484
+ G + + + +++ F + G
Sbjct: 789 SEGVTPDPEICKTVLNAFHQQG 810
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 114/297 (38%), Gaps = 80/297 (26%)
Query: 328 TIDDDVLNALIGSVSSIDPRSAIVFFNFMIE--------------------KGRVPTL-S 366
T+ + V++ ++ + ++ P A+ FF F+I KGR L S
Sbjct: 79 TLSETVVDGVLDRLRTLKPDVAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFKELDS 138
Query: 367 TLSNLSKNLCKRNKS---DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ NL + + S D L+E ++ +N DM ++ + +A VI
Sbjct: 139 VIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFA-----YSRHEMIHDALFVI 193
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD---QMFASG-----CSGNLKTY-- 473
+MK V YNSL+ +R +WD ++ SG C+ ++ +
Sbjct: 194 AKMKDLNFQASVPTYNSLLHN------MRHTDIMWDVYNEIKVSGAPQSECTTSILIHGL 247
Query: 474 ---------------------------NILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
N ++SKF +VG I+ A F M++ G+ D+
Sbjct: 248 CEQSKLEDAISFLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSF 307
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDV--------MLARSILSTFMISLCRRVL 555
+Y LL GLC ++ A + H V LA+ L ++S R+V+
Sbjct: 308 SYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVV 364
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 199/465 (42%), Gaps = 26/465 (5%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKI-TLDSSV-YRFIIPSLIQGKNTQKAFSVF 142
++Y+++L S +++ +L++++ L S V Y +I L + +KA +
Sbjct: 232 VTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLV 291
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG-----VEFSTIGFGVFIW 197
+ ++ + + N L+ + G ++ A + EM + G V ++TI G+F
Sbjct: 292 DRMRMS-KKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRS 350
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
E A++ V R ++ + +I+G+CK ++EA + +L+
Sbjct: 351 GNVEAARM-------KFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGL 403
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
P + Y I+ + + +G + E ++ + G P + Y + G R + +E
Sbjct: 404 APSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVRE 463
Query: 318 LGEVIVSGKFTIDDDVLNA------LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
+ ++S D N ++GS S A MI +G T +
Sbjct: 464 FFDEMLSKGLQPDCFAYNTRISAELILGSTSE-----AFQLTEVMISRGISSDTVTYNIF 518
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
LCK + ++ + ++ D +Y ++ C GRLREA + M GL
Sbjct: 519 LDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGL 578
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
P Y + A CR L A + +M G N TYN+LI +G A +
Sbjct: 579 PPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQ 638
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
FH MLE+G++P+ TYT L++G C+E N + A ++++ H +
Sbjct: 639 HFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGI 683
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 200/439 (45%), Gaps = 14/439 (3%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF--IIPSLIQGKNTQKAFS 140
S ++Y+ ++ L+ ++ ++ +++++K +S + F +I + +KA +
Sbjct: 267 SDVTYNVVINGLARKGELEKAAQLVDRMRMSK---KASAFTFNPLITGYFARGSVEKAGA 323
Query: 141 VFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ +++ E I P + N+++ + G ++ A F EM G+ I + I
Sbjct: 324 L--QLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLING 381
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIREC 257
+C+ L + L + ++++ + + SV+ +++ G+C+ +EEA + E+ + C
Sbjct: 382 YCKAGNLKEALWLFGDLKR---AGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGC 438
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
+PD Y I+ + + ++ + G+ P Y I ++ EA +
Sbjct: 439 QPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQ 498
Query: 318 LGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
L EV++S + D N + G S + + A V + M+ G P T + L C
Sbjct: 499 LTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHC 558
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+R + E +++ + + +Y V + C G L AYG Q+M +G+ P+
Sbjct: 559 ERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEV 618
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN L+ A CR A + + +M G S N TY +LI + G E A+RL+ M
Sbjct: 619 TYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEM 678
Query: 497 LEKGVAPDATTYTSLLEGL 515
+ G+ PD T+ +L +G
Sbjct: 679 HQHGIHPDHCTHNALFKGF 697
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 177/433 (40%), Gaps = 39/433 (9%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN +L L + D+ ++ EM G+E S + + + F ++ Q +L E+
Sbjct: 199 CNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREME 258
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
R + V ++I+G + +E+A +++D +R+ + F ++ F GS
Sbjct: 259 ARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAFTFNPLITGYFA-RGS 317
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV-LN 335
V + + + G+ P Y I G+ + EA + V + + D + N
Sbjct: 318 VEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNV-EAARMKFVEMRAMGLLPDLITYN 376
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK-------RNKSDELVE- 386
+LI G + + + A+ F + G P++ T + L C+ R E+VE
Sbjct: 377 SLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQ 436
Query: 387 -------VYKVLS-----------ANDYFTDMES---------YNVMVSFLCTSGRLREA 419
Y +L ++F +M S YN +S G EA
Sbjct: 437 GCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEA 496
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ + + M +G+ D YN ++ C+ L+ A LW +M + G + TY LI
Sbjct: 497 FQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHA 556
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
E G + A +F ML G+ P A TYT + C+ NL +A+ F K + V
Sbjct: 557 HCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPN 616
Query: 540 RSILSTFMISLCR 552
+ + +LCR
Sbjct: 617 EVTYNVLIHALCR 629
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 3/174 (1%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F M G P + + + + L + D++ VY + + +YN ++
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243
Query: 413 SGRLREAYGVIQEMKRK--GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
GR+ +A +++EM+ + G P YN ++ R+ L A +L D+M S +
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAF 303
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
T+N LI+ + G +E A L M +G+ P TY +++ G+ + N++AA
Sbjct: 304 -TFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAA 356
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 180/431 (41%), Gaps = 9/431 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+++S++ + Q++ + ++ + D Y +I L + +A +F E+
Sbjct: 190 TFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEM 249
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + +L+ L + + L M M G ST + + C K
Sbjct: 250 ----DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKA 305
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ ML E+ E + V +I+ +CK R+ +A +VL+ +++R CKP+ Y
Sbjct: 306 KEAEEMLQEMF--EKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYN 363
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + F G V + +L K R GV P Y I G ++ I A L ++
Sbjct: 364 ALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGD 423
Query: 326 KFTIDDDVLNALIGSVSSIDPRS--AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
D NALI ++ D R+ A F+ + +G P T ++L LCK K+D
Sbjct: 424 GLIADQYTYNALINALCK-DGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADI 482
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ + + + D +Y+ + LC +E I EM +K + P Y ++
Sbjct: 483 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIH 542
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+E + W +M +SGC+ ++ TY + + G + A + M + GV
Sbjct: 543 KLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTV 602
Query: 504 DATTYTSLLEG 514
D Y +L++G
Sbjct: 603 DTMAYNTLMDG 613
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 161/395 (40%), Gaps = 40/395 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++ L + AL+ M G F I +C ++ + D++
Sbjct: 157 NAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPL 216
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R V +I G C+ R++EA ++ E+ +PD Y + +
Sbjct: 217 R--GFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYAALVKGLCNAERG 270
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E ++L++ ++LG P T Y + ER+ EA+E+
Sbjct: 271 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEM------------------- 311
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
M EKG P + T + + CK + + + V +++
Sbjct: 312 ---------------LQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCK 356
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
++ +YN +V C G++ +A ++ +M+ G++PD YN L+ C + + A +L
Sbjct: 357 PNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRL 416
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
M G + TYN LI+ + G + A LF ++ +G+ P+A T+ SL+ GLC+
Sbjct: 417 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 476
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A++ K V+ S+F+ LC+
Sbjct: 477 SGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK 511
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 165/396 (41%), Gaps = 11/396 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NSL+ +D A +FD+M RG + + I CE ++ + + + E+ +
Sbjct: 192 NSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ 251
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ M ++ G C +R EE +L ++ +P AY V +
Sbjct: 252 PDMHMYAA------LVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKA 305
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E E +L++ + G+AP I E R+ +A + E++ + NAL
Sbjct: 306 KEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNAL 365
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ G + A+ N M G P T + L + C + + +++ +
Sbjct: 366 VQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGL 425
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D +YN +++ LC GR +A + ++ +G+ P+ +NSL+ C+ A K
Sbjct: 426 IADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWK 485
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
++M ++GC+ + TY+ I ++ + L ML+K V P YT ++ L
Sbjct: 486 FLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLL 545
Query: 517 QETNL----QAAFEVFNKSVNHDVMLARSILSTFMI 548
+E N + E+ + N DV+ + + + I
Sbjct: 546 KERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCI 581
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 108/538 (20%), Positives = 212/538 (39%), Gaps = 45/538 (8%)
Query: 10 ATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVA--RVINPYL----LTH 63
+TR A++ R R A++ +L++ + L+P +V VIN Y ++
Sbjct: 288 STRAYAAVVDFRCRERKAKEAEEMLQEMFEK-----GLAPCVVTCTAVINAYCKEGRMSD 342
Query: 64 HSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
L +PN +Y+++++ +++ ++L +++ + D+ Y
Sbjct: 343 ALRVLELMKLRGCKPNV----WTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYN 398
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR 183
+I + + AF + ++ + N+L+ L DG D A +FD + R
Sbjct: 399 LLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETR 458
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G++ + + F I C++ K L+++ + + I H CK K +
Sbjct: 459 GIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVS-AGCTPDTYTYSSFIEH-LCKMKGSQ 516
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR-----KLGVAPRTND 298
E + E+ ++ KP + Y IV + + ER L + G P
Sbjct: 517 EGLSFIGEMLQKDVKPSTVNYTIVIHKL-----LKERNYGLVARTWGEMVSSGCNPDVVT 571
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMI 357
Y + +E R+ EA+ + + T+D N L+ +SI A+ M
Sbjct: 572 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 631
Query: 358 EKGRVPTLSTLSNLSKNLCKRN--------------KSDELVEVY---KVLSANDYFTDM 400
VP T L ++L + K+ EL +V+ V+ N++ +
Sbjct: 632 SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNS 691
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+Y+ ++ GR EA ++ MK + + Y +L+ C+ A L
Sbjct: 692 GTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCS 751
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
M G L +Y L+S G+ + A +F N K +PD + +++GL ++
Sbjct: 752 MIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKK 809
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/447 (20%), Positives = 166/447 (37%), Gaps = 55/447 (12%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLA 165
VL+ +K+ + Y ++ KA ++ N+++ + N L+
Sbjct: 346 VLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQC 405
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMING 225
DG+I++A ++ M G+ + I C++ + Q S+ D + R +
Sbjct: 406 IDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETR--GIKPN 463
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
+V +I+G CK + + A+K L+++ C PD Y E M E +
Sbjct: 464 AVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIG 523
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRI-CEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
+ + V P T +Y I L+ ER A+ GE
Sbjct: 524 EMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGE------------------------ 559
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
M+ G P + T + + C + +E V +S N D +YN
Sbjct: 560 -----------MVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYN 608
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR----EDLL--RPAK--- 455
++ + G+ A ++++M P+ Y L+ R ED+L PA
Sbjct: 609 TLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWK 668
Query: 456 --------KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
L+D M + N TY+ ++ FSE G E A L M E ++ +
Sbjct: 669 AIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDI 728
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNH 534
YT+L+ C+ A+ + + H
Sbjct: 729 YTALVTCFCKSKRYLDAWVLVCSMIQH 755
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 93/493 (18%), Positives = 185/493 (37%), Gaps = 66/493 (13%)
Query: 54 RVINPYLLTHHSLALGFFNWASQQPNFT-----------HSPLSYHSILKSLSLSRQINA 102
R P + T+++L GF N T ++Y+ +++ + I +
Sbjct: 353 RGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIES 412
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLA 162
+L+ ++ + + D Y +I +L + T +A S+F+ ++ NSL+
Sbjct: 413 AFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLIN 472
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
L G D A K ++M G T + FI C+ + LS + E+ +++ +
Sbjct: 473 GLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD--V 530
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+V ++IH K + + E+ C PD + Y + + G + E E
Sbjct: 531 KPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAEN 590
Query: 283 VLKKKRKLGVAPRTNDYREFILGLI----VERRICEAKELGEVI-VSGKFT--------- 328
VL + K GV T Y + G + + K++ V V +FT
Sbjct: 591 VLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLV 650
Query: 329 ---IDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ +DVL V +I+ F+ M + +P T S++ + + +++E
Sbjct: 651 RMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEA 710
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+ ++ + + + Y +V+ C S R +A+ ++ M + G P + Y L+
Sbjct: 711 TSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSG 770
Query: 445 CCREDLLRPAKKL---------------W----DQMFASG----------------CSGN 469
E AK++ W D + G C +
Sbjct: 771 LICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPS 830
Query: 470 LKTYNILISKFSE 482
+TY +L + +
Sbjct: 831 HQTYAMLTEELPD 843
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN ++ LC L A + M R G PD +NSL+ CR + + A+ L+D+M
Sbjct: 155 TYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 214
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
G + ++ +Y LI E G I+ A+ LF M + PD Y +L++GLC
Sbjct: 215 PLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLC 265
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P YN+++ + CR L A + M SG + T+N LI + +++ A L
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
F M +G A D +Y +L+EGLC+ + A E+F + D+ + +++
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALV 261
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 88/208 (42%), Gaps = 8/208 (3%)
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
++ P + +F + PT T + + ++LC+R + ++ + + D +
Sbjct: 131 ALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYT 190
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+N ++ C + ++ A + +M +G DV Y +L+E C + A +L+ +M
Sbjct: 191 FNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD 250
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
++ Y L+ E L + M E G P Y ++++ C+E +
Sbjct: 251 QP----DMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAK 306
Query: 523 AA----FEVFNKSVNHDVMLARSILSTF 546
A E+F K + V+ ++++ +
Sbjct: 307 EAEEMLQEMFEKGLAPCVVTCTAVINAY 334
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 132/627 (21%), Positives = 251/627 (40%), Gaps = 117/627 (18%)
Query: 30 WTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHS 89
W LE L+ + P LV VI L +AL +F W ++ HSP +Y++
Sbjct: 82 WGAALEDALNTFD--EMPQPELVVGVIRR--LKDVRVALHYFRWVERKTKQLHSPEAYNA 137
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV---K 146
+L ++ +R + ++ +L+++ + ++ ++ S ++ + ++AF V + K
Sbjct: 138 LLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFK 197
Query: 147 F----------------------------NCEDIGPEIC----NSLLAVLASDGYIDNAL 174
F ++IG E+ +L+ V A +G +D AL
Sbjct: 198 FRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAAL 257
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIH 234
+ DEM + + V I F + K+ E++ + ++ V +I
Sbjct: 258 SLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQ--GLVPDDVTFTSMIG 315
Query: 235 GFCKGKRVEEAFKVLDEL-----------------------------------RIRECKP 259
CK +RV+EA ++ +EL + + C P
Sbjct: 316 VLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIP 375
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI---------------- 303
IAY + G V E +L+ K+ AP Y I
Sbjct: 376 SVIAYNCILTCLGRKGKVEEALRILEA-MKMDAAPNLTSYNILIDMLCKAGELEAALKVQ 434
Query: 304 -----LGL--------IVERRICEAKELGEVI-----VSGKFTIDDDV-LNALIGSVSSI 344
GL I+ R+C+A+ L E + K D V +LI +
Sbjct: 435 DSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRH 494
Query: 345 DP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
A + + M++ G+ P ++L +N K + ++ ++YK + D+
Sbjct: 495 GKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLL 554
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N + + +G + + + +E+K +GL PDV Y+ L+ + + KL+ +M
Sbjct: 555 NNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKE 614
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G + + YNI+I F + G++ A +L M KG+ P TY S+++GL + L
Sbjct: 615 QGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDE 674
Query: 524 AFEVF----NKSVNHDVMLARSILSTF 546
A+ +F +K+V+ +V++ S++ F
Sbjct: 675 AYMLFEEAKSKAVDLNVVVYSSLIDGF 701
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 172/396 (43%), Gaps = 4/396 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N +L L G ++ AL++ + M T + + I C+ +L L + D ++
Sbjct: 381 NCILTCLGRKGKVEEALRILEAMKMDAAPNLT-SYNILIDMLCKAGELEAALKVQDSMK- 438
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E + + ++I CK +R++EA + L + C PD + + + + G V
Sbjct: 439 -EAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKV 497
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ ++ +K G P Y I R + ++ + ++ + D +LN
Sbjct: 498 NDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNY 557
Query: 338 IGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ V + + F + +G P + + S L L K S + +++ +
Sbjct: 558 MDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGL 617
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D +YN+++ C SG++ +AY +++EMK KGL P V Y S+++ + D L A
Sbjct: 618 HLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYM 677
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L+++ + N+ Y+ LI F +VG I+ A + +++KG+ P+ T+ LL+ L
Sbjct: 678 LFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALV 737
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ + A F N S + LC+
Sbjct: 738 KAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCK 773
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/488 (21%), Positives = 203/488 (41%), Gaps = 53/488 (10%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y++++ + N S+L++ K Y I+ L + ++A + +
Sbjct: 344 AYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM 403
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
K D P + N L+ +L G ++ ALK+ D M G+ + I + I + C+
Sbjct: 404 KM---DAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQ 460
Query: 204 KLGQVLSM---LDEVRKRENS-----MING-------------------------SVIAV 230
+L + S+ LD +S +I+G +V+
Sbjct: 461 RLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYT 520
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I F K R E+ K+ E+ R C PD + + G + + + ++ +
Sbjct: 521 SLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQ 580
Query: 291 GVAPRTNDYREFILGLI-------VERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVS 342
G+ P Y I GL+ + E KE G +D N +I G
Sbjct: 581 GLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQG-------LHLDTRAYNIVIDGFCK 633
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
S A M KG PT+ T ++ L K ++ DE +++ + ++
Sbjct: 634 SGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVV 693
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y+ ++ GR+ EAY +++E+ +KGL P+ +N L++A + + + A + M
Sbjct: 694 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMK 753
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
C N TY+I+++ +V + A + M ++G+ P+ TYT+++ GL + N+
Sbjct: 754 NLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVL 813
Query: 523 AAFEVFNK 530
A ++F +
Sbjct: 814 EAKDLFER 821
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 183/412 (44%), Gaps = 7/412 (1%)
Query: 116 TLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALK 175
T DS + +I L + A+ ++ ++ + + + SL+ G ++ K
Sbjct: 478 TPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHK 537
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
++ EM HRG + ++ + ++ + ++ +E++ + + ++IHG
Sbjct: 538 IYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQ--GLTPDVRSYSILIHG 595
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
KG ++ +K+ E++ + D AY IV + F G V + +L++ + G+ P
Sbjct: 596 LVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPT 655
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---GSVSSIDPRSAIVF 352
Y I GL R+ EA L E S ++ V ++LI G V ID A +
Sbjct: 656 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRID--EAYLI 713
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
+++KG P T + L L K + DE + ++ + + +Y++MV+ LC
Sbjct: 714 LEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCK 773
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
+ +A+ QEM+++GL P+ Y +++ R + AK L+++ +SG +
Sbjct: 774 VRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSAC 833
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
YN +I S + A LF KG + T LL+ L + L+ A
Sbjct: 834 YNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQA 885
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 121/533 (22%), Positives = 221/533 (41%), Gaps = 38/533 (7%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDS 105
+L+P V RV+ L LA FF W+ + F HS SY + L +R +S
Sbjct: 105 TLAPIWVPRVLVE-LKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANS 163
Query: 106 VLKQVKVNKITLDS---------------SVYRFIIPSLIQGKNTQKAFSVFNEVK-FNC 149
VLK++ ++K D V+ + LI ++A F+++K F
Sbjct: 164 VLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFR- 222
Query: 150 EDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
+ P+ CN LL A G D+ + F +M G + + + I C+ +
Sbjct: 223 --VFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEA 280
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
+ +E++ R ++ +V +I GF K R+++ +E++ C+PD I Y +
Sbjct: 281 ARGLFEEMKFR--GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL 338
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-------KELGE 320
F G + ++ + G+ P Y + E + +A + +G
Sbjct: 339 INCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
V +T D N IG++S A N M++ G + T + L LC +
Sbjct: 399 VPNEYTYTSLIDA-NCKIGNLSD-----AFRLGNEMLQVGVEWNVVTYTALIDGLCDAER 452
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
E E++ + ++ SYN ++ + + A ++ E+K +G+ PD+ Y +
Sbjct: 453 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 512
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+ C + + AK + ++M G N Y L+ + + G L L M E
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI-SLCR 552
+ T+ L++GLC+ + A + FN+ N + A + + T MI LC+
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 625
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/492 (19%), Positives = 195/492 (39%), Gaps = 43/492 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y+ ++ + + A + +++K + D+ Y +I + F E
Sbjct: 263 FTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEE 322
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+K C + N+L+ G + L+ + EM G++ + + + + FC+
Sbjct: 323 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 205 LGQVLSMLDEVRK--------RENSMINGS-------------------------VIAVL 231
+ Q + ++R+ S+I+ + V
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I G C +R++EA ++ ++ P+ +Y + F ++ +L + + G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 292 VAPRTNDYREFILGLIVERRICEAK----ELGEVIVSGKFTIDDDVLNALIGSVSSIDPR 347
+ P Y FI GL +I AK E+ E + I +++A S +P
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF---KSGNPT 559
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES--YNV 405
+ + M E T+ T L LCK + V+ + +S ND+ + +
Sbjct: 560 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS-NDFGLQANAAIFTA 618
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
M+ LC ++ A + ++M +KGL PD + Y SLM+ ++ + A L D+M G
Sbjct: 619 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 678
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+L Y L+ S +++ A M+ +G+ PD S+L+ + + A
Sbjct: 679 MKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAV 738
Query: 526 EVFNKSVNHDVM 537
E+ + + H ++
Sbjct: 739 ELQSYLMKHQLL 750
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 207/474 (43%), Gaps = 39/474 (8%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLA 165
+L Q++ I ++ +Y +I S + T A + ++++ + E NS ++ L
Sbjct: 204 LLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALC 263
Query: 166 SDGYIDNALKMFDEMS---HRGVEF-STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
G I A ++F +M G+ + I + + + FC+ L + +++D +++ N
Sbjct: 264 GSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNAN- 322
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
IN + ++ G + ++ EA+ VL E+ +PD +Y IV + G + +
Sbjct: 323 FINLESYNIWLL-GLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDAR 381
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
+++ + G+ P T Y + G + ++ EA L ++S + + N L+ S+
Sbjct: 382 MLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSL 441
Query: 342 SSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK----------- 389
S A M EKG T + + LC + D+ +E+
Sbjct: 442 WKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALG 501
Query: 390 ------------VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+S D+ +Y+ ++S LC +GRL +A EM KGL PD +
Sbjct: 502 NLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAI 561
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
Y++ + + CRE + A ++ M GC+ L+TYN LI +I L M
Sbjct: 562 YDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMR 621
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI---LSTFMI 548
EKGV+PD TY +L LC+ + A V D ML + I +S+F I
Sbjct: 622 EKGVSPDVCTYNHMLNCLCEGGRINDAPSVL------DEMLQKGISPNISSFRI 669
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 188/437 (43%), Gaps = 71/437 (16%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ +L G++++A ++FD+M RG E + FG+ + +C + L +L ++R
Sbjct: 151 NLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRT 210
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY--RIVA------- 268
++ +V+ +I FCK + +A K++D++R P + RI A
Sbjct: 211 M--GILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKI 268
Query: 269 -------------EE----------FKLMGSVFEREVVLKKKRKLGVAPRTN-------D 298
EE +KLM F +E +L++ + L + N
Sbjct: 269 LEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLES 328
Query: 299 YREFILGLIVERRICEA----KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFN 354
Y ++LGLI ++ EA KE+ + + + V++ L + D R +
Sbjct: 329 YNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDAR---MLMG 385
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
MI G +P T S L C + K E + + +N+ + + NV++ L G
Sbjct: 386 LMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEG 445
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG--------- 465
R+ EA ++Q+M KG D N ++ A C L A ++ + M+ G
Sbjct: 446 RISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGN 505
Query: 466 --------------CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
C+ +L TY+ +IS + G ++ A + F M+ KG+ PD+ Y +
Sbjct: 506 SFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTF 565
Query: 512 LEGLCQETNLQAAFEVF 528
+ C+E + +AF+V
Sbjct: 566 IHSFCREGKISSAFQVL 582
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 194/437 (44%), Gaps = 30/437 (6%)
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLA 162
ID L N IT Y+ ++ + ++A ++ + +K N I E N L
Sbjct: 280 IDEELGLPHPNVIT-----YKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLL 334
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
L +G + A + EM G+E + + + C+N L ++ + + N +
Sbjct: 335 GLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIR--NGI 392
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+ +V ++HG+C +V EA +L E+ C P+ ++ G + E E
Sbjct: 393 LPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAEN 452
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI--VSGKFTIDDDVL----NA 336
+L+K + G T + I+ +C +L + I V+G +T L N+
Sbjct: 453 LLQKMNEKGYGVDT------VTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNS 506
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
IG V D S K P L T S + LCK + D+ + + + +
Sbjct: 507 FIGLVD--DTISG---------KKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGL 555
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D Y+ + C G++ A+ V+++M+++G + + YNSL+ ++ +
Sbjct: 556 QPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYG 615
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L D+M G S ++ TYN +++ E G I A + ML+KG++P+ +++ L++ C
Sbjct: 616 LIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFC 675
Query: 517 QETNLQAAFEVFNKSVN 533
+ + +A+ EVF ++N
Sbjct: 676 KACDFKASHEVFEIALN 692
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 4/198 (2%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G +P + L + CK K+ + ++ + + +E++N +S LC SG++ EA
Sbjct: 212 GILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEA 271
Query: 420 YGVIQEMK---RKGL-DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ ++M+ GL P+V Y ++ C+E +L AK L D M + NL++YNI
Sbjct: 272 SRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNI 331
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
+ G++ A + ML G+ PD +Y +++GLC+ L A + + +
Sbjct: 332 WLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNG 391
Query: 536 VMLARSILSTFMISLCRR 553
++ ST + C +
Sbjct: 392 ILPDTVTYSTLLHGYCSK 409
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 2/149 (1%)
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLD--PDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+V+ L SG +A + ++ + P + YN L+++C RE+ + L+ M
Sbjct: 81 LVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVL 140
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
+ S T+N+LI + G +E A LF M +G P+ T+ L+ G C+
Sbjct: 141 ARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASK 200
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCR 552
E+ + ++ + +T + S C+
Sbjct: 201 GLELLGQMRTMGILPNNVLYNTLISSFCK 229
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 198/426 (46%), Gaps = 20/426 (4%)
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR 183
F++ SL++ K+F VF+ + I + + G ID A+ +F +M
Sbjct: 211 FLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEG 270
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
GV + + + I C++ +L + L + + R EN + V ++++G K ++ +
Sbjct: 271 GVLPNVVTYNNLIDGLCKSGRLEEAL--MFKGRMVENKVNPSLVTYGILVNGLVKFEKFD 328
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
EA VL E+ + P+ + + + + G++ + V G+ P + +
Sbjct: 329 EANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLL 388
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDD----VLNALIGSVSSIDPRSAIVFFNFMIEK 359
G ++ +A+++ E ++S ++++D VL+ L S S D SA+ ++ +
Sbjct: 389 QGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKS-SKFD--SALKIVKALLLR 445
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVY------KVLSANDYFTDMESYNVMVSFLCTS 413
S L+ L LCK K E ++++ K L+AN + N ++ LC
Sbjct: 446 NIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAAN-----TTTSNALLYGLCER 500
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G + E + V +EM +GL D YN+L+ CC+ + A KL ++M G + TY
Sbjct: 501 GNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTY 560
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
N L+ ++ G+++ R+ H + GV P+ TY +LEG C + A +FNK V
Sbjct: 561 NFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVY 620
Query: 534 HDVMLA 539
+ V L+
Sbjct: 621 NKVELS 626
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/454 (19%), Positives = 195/454 (42%), Gaps = 47/454 (10%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PN ++++++L+ + Q+ + VL+ + N ++++ +++ L +
Sbjct: 378 KPN----AVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFD 433
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS-HRGVEFSTIGFGVF 195
A + + + + L+ L G A+ ++ ++ +G+ +T
Sbjct: 434 SALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNAL 493
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
++ CE + +V + E+ +R ++ + +I G CK ++EEAFK+ +++ +
Sbjct: 494 LYGLCERGNMEEVFPVCKEMVER--GLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQ 551
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
KPD Y + + G + + VL + + GV P Y + G RI A
Sbjct: 552 GFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNA 611
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
L +V K + V N LI + S
Sbjct: 612 VSLFNKLVYNKVELSYVVYNILIAAHS--------------------------------- 638
Query: 376 CKRNKSDELVEVYKV---LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
K+ E +K+ + +++ + +Y+ ++ +C + + EA G+ +EM+ +GL
Sbjct: 639 ----KAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLM 694
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P+V Y +L+ C+ + + + +M ++ N TY I+I + ++G + A +L
Sbjct: 695 PNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKL 754
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ M+ G++PD TYT L +G C+E L+ +
Sbjct: 755 LNEMIANGISPDTVTYTVLQKGYCKENELEETLQ 788
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/433 (19%), Positives = 181/433 (41%), Gaps = 40/433 (9%)
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAV 163
D LK +K N +T ++ ++ + ++A V + N + + C+ +L +
Sbjct: 371 DMTLKGLKPNAVTHNT-----LLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHL 425
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L D+ALK+ + R ++ + + + C+ K + + + + ++
Sbjct: 426 LCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAA 485
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
N + L+ +G C+ +EE F V E+ R D I+Y + G + E +
Sbjct: 486 NTTTSNALL-YGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKL 544
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
+K K G P T Y + GL + ++ ++G V+ K
Sbjct: 545 KEKMMKQGFKPDTYTYNFLMKGLADKGKM---DDVGRVLHEAK----------------- 584
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ G VP + T + + + C ++ D V ++ L N Y
Sbjct: 585 --------------DHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVY 630
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N++++ +G EA+ + M+ + P + Y+S++ C DL+ AK ++++M
Sbjct: 631 NILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRN 690
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G N+ Y LI + ++G+++ + M + P+ TYT +++G C+ N +
Sbjct: 691 EGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKE 750
Query: 524 AFEVFNKSVNHDV 536
A ++ N+ + + +
Sbjct: 751 ATKLLNEMIANGI 763
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/529 (20%), Positives = 215/529 (40%), Gaps = 60/529 (11%)
Query: 59 YLLTHHSLALGFFNWASQQ----------PNFTHSPLSYHSILKSLSLSRQINAIDSVLK 108
Y+L LGF +WA P+ S++KS L + D++ +
Sbjct: 176 YILCSQFQHLGF-HWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCR 234
Query: 109 QVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLAS 166
+ +D Y I + +G +A +F +K + P + N+L+ L
Sbjct: 235 ----GGVLIDVYTYATAINAYCKGGKIDEAVGLF--LKMGEGGVLPNVVTYNNLIDGLCK 288
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
G ++ AL M V S + +G+ + + K + S+L E+ + S
Sbjct: 289 SGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFS--PNE 346
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
+ +I G+ + +++A +V D++ ++ KP+ + + + + F + + E VL+
Sbjct: 347 FVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEY 406
Query: 287 KRKLGVAPRTNDYREFILGLIVER-RICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID 345
V D ++L L+ + + A ++ + ++ ++D +L L+ +
Sbjct: 407 LLS-NVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCG 465
Query: 346 PR-SAI-VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
AI ++F +KG +T + L LC+R +E+ V K + D SY
Sbjct: 466 KHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISY 525
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM--------------------- 442
N ++ C SG++ EA+ + ++M ++G PD YN LM
Sbjct: 526 NTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKD 585
Query: 443 --------------EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
E C D + A L++++ + + YNILI+ S+ G
Sbjct: 586 HGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTE 645
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
A +L M + P TY+S++ G+C ++ A +F + N +M
Sbjct: 646 AFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLM 694
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 1/219 (0%)
Query: 335 NALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N L+ S V S + + F+ M G + + T + CK K DE V ++ +
Sbjct: 210 NFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGE 269
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
++ +YN ++ LC SGRL EA M ++P + Y L+ + +
Sbjct: 270 GGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDE 329
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A + +M++ G S N +N LI +S G ++ ALR+ +M KG+ P+A T+ +LL+
Sbjct: 330 ANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQ 389
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
G C+ ++ A +V +++ + + S + LC+
Sbjct: 390 GFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCK 428
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 98/206 (47%), Gaps = 4/206 (1%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F M E G +P + T +NL LCK + +E + + N + +Y ++V+
Sbjct: 260 AVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVN 319
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L + EA V+ EM KG P+ +N+L++ R+ + A ++ D M G
Sbjct: 320 GLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKP 379
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEK--GVAPDATTYTSLLEGLCQETNLQAAFE 526
N T+N L+ F ++E A ++ +L V DA +Y +L LC+ + +A +
Sbjct: 380 NAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSY--VLHLLCKSSKFDSALK 437
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+ + ++ + S+L+ + LC+
Sbjct: 438 IVKALLLRNIKVNDSLLTLLVCGLCK 463
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 135/356 (37%), Gaps = 80/356 (22%)
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K + ++F+V D + D Y + G + E + K + GV P
Sbjct: 218 KSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVV 277
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMI 357
Y I GL C++ L E A++F M+
Sbjct: 278 TYNNLIDGL------CKSGRLEE----------------------------ALMFKGRMV 303
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDE----LVEVY-KVLSANDYFTDMESYNVMVSFLCT 412
E P+L T L L K K DE LVE+Y K S N++ +N ++
Sbjct: 304 ENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFV-----FNALIDGYSR 358
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G + +A V +M KGL P+ +N+L++ CR + + A+++ + + ++ S N
Sbjct: 359 KGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDA 418
Query: 473 YNILISKFSEVGEIEGALRLFHNML----------------------------------- 497
+ ++ + + + AL++ +L
Sbjct: 419 CSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLA 478
Query: 498 -EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+KG+A + TT +LL GLC+ N++ F V + V ++L +T + C+
Sbjct: 479 DKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCK 534
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 188/434 (43%), Gaps = 45/434 (10%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y++++ S + +A + V+ ++K + D Y +I SL A V ++
Sbjct: 147 FAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQ 206
Query: 145 V-KFNCEDIGPEICNSLLAVLAS--DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ + NC P + + + A+ G ID+A+++ DEM RG++ + V + C+
Sbjct: 207 LLEDNCN---PTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCK 263
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ + + + + + ++ L+ G R E +++ ++ ++ C+P+
Sbjct: 264 RGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEG-----RWEAGERLMSDMIVKGCEPNI 318
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ Y ++ G E VL+ ++ G+ P Y I E
Sbjct: 319 VTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKE------------ 366
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
GK + AI F + MI G +P + + + +LCK+ ++
Sbjct: 367 ---GKVDL-------------------AIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRA 404
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
DE + ++K L + SYN M L +SG A +I EM G+DPD YNSL
Sbjct: 405 DEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSL 464
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ + CR+ ++ A L M + + +YNI++ + I A+ + M++ G
Sbjct: 465 ISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGC 524
Query: 502 APDATTYTSLLEGL 515
P+ TTYT L+EG+
Sbjct: 525 QPNETTYTLLVEGV 538
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 161/372 (43%), Gaps = 9/372 (2%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+C L+ L + + A+++ + + G + + + I FC + + ++ +
Sbjct: 114 LCTKLIKGLFTSKRTEKAVRVMEILEQYG-DPDSFAYNAVISGFCRSDRFDAANRVI--L 170
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
R + V ++I C +++ A KV+D+L C P I Y I+ E + G
Sbjct: 171 RMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHG 230
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
S+ + +L + G+ P Y + G+ + A E VS T L
Sbjct: 231 SIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEF----VSNLNTTPSLNLY 286
Query: 336 ALIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
L+ + R + + MI KG P + T S L +LC+ K+ E V+V +V+
Sbjct: 287 NLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKE 346
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
D Y+ ++S C G++ A G + +M G PD+ YN++M + C++
Sbjct: 347 KGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADE 406
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A ++ ++ GC N +YN + G+ AL + ML GV PD TY SL+
Sbjct: 407 ALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLIS 466
Query: 514 GLCQETNLQAAF 525
LC++ + A
Sbjct: 467 SLCRDGMVDEAI 478
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 93/180 (51%), Gaps = 5/180 (2%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES--YNVM 406
A+ F M+++G P + + L K L ++++ V V ++L + + D +S YN +
Sbjct: 96 ALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEIL---EQYGDPDSFAYNAV 152
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+S C S R A VI MK +G PDV YN L+ + C L A K+ DQ+ C
Sbjct: 153 ISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNC 212
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ + TY ILI G I+ A+RL M+ +G+ PD TY ++ G+C+ + AFE
Sbjct: 213 NPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFE 272
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 180/410 (43%), Gaps = 39/410 (9%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGF-----GVFIWKFCENAKLGQVLSMLDEVRKR 218
L G AL ++M RG + I G+F K E A +V+ +L++
Sbjct: 87 LCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAV--RVMEILEQYGDP 144
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
++ N +I GFC+ R + A +V+ ++ R PD + Y I L+GS+
Sbjct: 145 DSFAYNA------VISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNI------LIGSLC 192
Query: 279 ER---EVVLKKKRKL---GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
R ++ LK +L P Y I I+ I +A L + ++S D
Sbjct: 193 ARGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMY 252
Query: 333 VLNALIGSVSSIDPRSAIV--FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
N ++ + + +V F F+ P+L+ + L K L + + +
Sbjct: 253 TYNVIVRGMC----KRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSD 308
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ ++ +Y+V++S LC G+ EA V++ MK KGL+PD Y+ L+ A C+E
Sbjct: 309 MIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGK 368
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ A D M ++G ++ YN ++ + G + AL +F + E G P+A++Y +
Sbjct: 369 VDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNT 428
Query: 511 LLEGLCQETN----LQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+ L + L E+ + V+ D + S++S SLCR ++
Sbjct: 429 MFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLIS----SLCRDGMV 474
>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 620
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 158/389 (40%), Gaps = 41/389 (10%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L + + A KM DEM+ +G + + + C+ L LDE + +M
Sbjct: 146 LCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCK-------LDRLDEATEVLAAMP 198
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
+ I+ C+ R++E F V+ ++ R +P+ I Y + + F G + +
Sbjct: 199 PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAI 258
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
L + G P + + GL + R+ +A ++
Sbjct: 259 LARMVITGCTPNVVTFTALVRGLFDDGRVHDALDM------------------------- 293
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ +M+ +G P+ + + L + LC + + + F ++ +Y
Sbjct: 294 ---------WRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTY 344
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+ ++ +G L A + +M R G P+V Y ++++ C++ + AK L D+M
Sbjct: 345 STLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLL 404
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
C N T+N LI + + AL +FH M G P+ TY L+ GL +E N
Sbjct: 405 ENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGD 464
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCR 552
A + + +H + L+ +T + LC+
Sbjct: 465 ALHMVTEMQSHGIELSLVTYNTVVSGLCQ 493
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 181/443 (40%), Gaps = 62/443 (13%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY++I+ +L ++ + SV+ + V R + P++I AF E+
Sbjct: 203 SYNAIVLALCREFRMQEVFSVVSDM----------VGRGLQPNVITYTTIVDAFCKAGEL 252
Query: 146 KFNCEDIG--------PEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
+ C + P + +L+ L DG + +AL M+ M G ST+ + +
Sbjct: 253 RMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNIL 312
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
I C L S+L+ + ++ N + LI GF K + A + +++
Sbjct: 313 IRGLCSVGDLKGASSILNSM-EQHGCFPNVRTYSTLI-DGFSKAGDLGGAISIWNDMSRS 370
Query: 256 ECKPDFIAYRIVAEEF--KLMGSVFEREVVLKKKRKL-GVAPRTNDYREFILGLIVERRI 312
CKP+ + Y + + F KLM F + L K L P T + I R +
Sbjct: 371 GCKPNVVVYTNMVDVFCKKLM---FNQAKSLIDKMLLENCPPNTVTFNTLI------RSL 421
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
C+ + +G A+ F+ M G VP T + L
Sbjct: 422 CDCRRVGR----------------------------ALGVFHEMRRHGCVPNGRTYNELI 453
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
L + + + + + ++ + +YN +VS LC + REA + +M +G+
Sbjct: 454 HGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQ 513
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P+ +++++ A C+E +R A + M C N+ Y IL+++ ++ A+
Sbjct: 514 PNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTY 573
Query: 493 FHNMLEKGVAPDATTYTSLLEGL 515
ML +G+ P+ T+ L+ G+
Sbjct: 574 LLKMLYEGIYPNTVTWNVLVRGV 596
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/237 (18%), Positives = 92/237 (38%), Gaps = 3/237 (1%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL + W + + S +SY+ +++ L + S+L ++ + + Y +I
Sbjct: 290 ALDMWRWMVAE-GWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLI 348
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVE 186
+ + A S++N++ + + +++ V + A + D+M
Sbjct: 349 DGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCP 408
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
+T+ F I C+ ++G+ L + E+R R + NG L IHG + +A
Sbjct: 409 PNTVTFNTLIRSLCDCRRVGRALGVFHEMR-RHGCVPNGRTYNEL-IHGLFREGNCGDAL 466
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
++ E++ + + Y V E V + K G+ P + I
Sbjct: 467 HMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAII 523
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 170/389 (43%), Gaps = 40/389 (10%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L +G ++ AL D + G + + +G+ I C K+GQ + L +R+ E ++
Sbjct: 133 LCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLC---KMGQTRAALQVLRQIEGKLV 189
Query: 224 NGSVIAV-LIIHGFCKGKRV-----------------------------------EEAFK 247
N +V+ II G CK K V ++AF+
Sbjct: 190 NTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFR 249
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
+ +E+ ++ PD + I+ + G + E + V+ K GV P Y + G
Sbjct: 250 LFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYC 309
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLS 366
+ + +AK + +I + + N +I I A+ F+ M +G P
Sbjct: 310 LVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKV 369
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T ++L LCK + E+ + N D+ +YN ++ C + + +A +++++
Sbjct: 370 TYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKI 429
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
K G+ P++ YN L++ C+ L+ A+ ++ + G + N TYNI+I+ + G
Sbjct: 430 KEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLF 489
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ A L M + G+ PDA TY ++++ L
Sbjct: 490 DEAEVLLSKMEDNGIIPDAVTYETIIQAL 518
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 108/202 (53%), Gaps = 4/202 (1%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A ++ MI K PT+ T S+L C K + ++ + + D ++N++V
Sbjct: 212 AYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVD 271
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G+++EA VI M ++G++P V YN+LM+ C + + AK + + +
Sbjct: 272 ALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAP 331
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV- 527
N ++YNI+I+ F ++ ++ AL LFH M +G+AP TY SL++GLC+ + A+E+
Sbjct: 332 NSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELV 391
Query: 528 ---FNKSVNHDVMLARSILSTF 546
N + D++ S++ F
Sbjct: 392 DEMHNNCIPADIVTYNSLIDVF 413
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 93/181 (51%)
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LC K +E + + + A + + +Y ++++ LC G+ R A V+++++ K
Sbjct: 129 LKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKL 188
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
++ +V Y+++++ C++ L+ A L+ +M + T++ LI F VG+ + A
Sbjct: 189 VNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAF 248
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
RLF+ M+ K + PDA T+ L++ LC+E ++ A V + V +T M
Sbjct: 249 RLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGY 308
Query: 551 C 551
C
Sbjct: 309 C 309
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/188 (17%), Positives = 77/188 (40%), Gaps = 10/188 (5%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY+ ++ + ++ + ++ I Y +I L + A+ + +E+
Sbjct: 335 SYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEM 394
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
NC NSL+ V + ++D A+ + ++ G++ + + + I C+ +L
Sbjct: 395 HNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQL 454
Query: 206 GQVLSMLDEVRKRENSMINGSVIAV----LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ ++ +I G + ++I+G CK +EA +L ++ PD
Sbjct: 455 KNAQDVFQDL------LIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDA 508
Query: 262 IAYRIVAE 269
+ Y + +
Sbjct: 509 VTYETIIQ 516
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 64/149 (42%), Gaps = 23/149 (15%)
Query: 425 EMKRKGLDPDVSFYNSLMEAC----------------------CREDLLRPAKKLWDQMF 462
+M+ KG+ PD+ F S++ C C + A D +
Sbjct: 92 QMESKGVKPDL-FTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVL 150
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
A G N TY ILI+ ++G+ AL++ + K V + Y+++++GLC++ +
Sbjct: 151 ALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVT 210
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLC 551
A+ ++++ + + S+ + C
Sbjct: 211 DAYGLYSEMIVKRIPPTVVTFSSLIYGFC 239
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 212/446 (47%), Gaps = 21/446 (4%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+++L L +RQ ++++ ++ N + + I + Q +A + + +
Sbjct: 214 TYNTVLMGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRM 273
Query: 146 -KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ C P++ ++L+ + G +D+A+++ + M + +TI + + C
Sbjct: 274 PQYGCT---PDVVIYSTLVNGFSEQGRVDDAIELLNGMLCKP---NTICYNAALKGLCIA 327
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+ V ++ E+ R++ + N + ++L C+ V+ A +VL+++ C+PD +
Sbjct: 328 QRWEDVGQLIVEM-VRKDCLPNEATFSMLT-SCLCQNGLVDCAMEVLEQMHKYGCRPDAV 385
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + F G V + LK + +P + + GL R +A+EL +
Sbjct: 386 IYNTLIYSFSEQGRVDD---ALKLLNSMPCSPDVISFNAALKGLCRAERWDDAEELIVQM 442
Query: 323 VSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
+ + + N LI S+ +AI F M + G P + T S+L L ++
Sbjct: 443 LREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLV 502
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+ +E+++ + D+ YN ++ LC + R +A +I M RK P+ +N L
Sbjct: 503 ESAIELFQSMPCK---PDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNIL 559
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ + C++ L+ A ++++QM G + ++ TYN LI+ FSE G ++ A RL M K
Sbjct: 560 INSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCK-- 617
Query: 502 APDATTYTSLLEGLCQETNLQAAFEV 527
PDA +Y S L+GLC+ + A EV
Sbjct: 618 -PDAVSYNSALKGLCRAERWKEAEEV 642
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 165/373 (44%), Gaps = 15/373 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+A DG + +A ++ + + + I +C + +L L+++ +
Sbjct: 150 NTLVAGYCRDGRLADAERLLAAAGLS-GAANVVTYTTLINGYCRSGRLADALALIASMPV 208
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ +V+ G C ++ E+A ++ E+ C P+ + + F G +
Sbjct: 209 APDTYTYNTVL-----MGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNG-L 262
Query: 278 FEREV-VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID-DDVLN 335
+R V +L + + G P Y + G + R+ +A EL ++ TI + L
Sbjct: 263 LDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLNGMLCKPNTICYNAALK 322
Query: 336 ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
L + D IV M+ K +P +T S L+ LC+ D +EV + +
Sbjct: 323 GLCIAQRWEDVGQLIVE---MVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYG 379
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D YN ++ GR+ +A ++ M PDV +N+ ++ CR + A+
Sbjct: 380 CRPDAVIYNTLIYSFSEQGRVDDALKLLNSMP---CSPDVISFNAALKGLCRAERWDDAE 436
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L QM C T+NILI + G + A+ +F M + G PD TY+SL+ GL
Sbjct: 437 ELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGL 496
Query: 516 CQETNLQAAFEVF 528
++ +++A E+F
Sbjct: 497 SEQGLVESAIELF 509
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 168/393 (42%), Gaps = 50/393 (12%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N++L L ++A + EM + + F I FC+N L + + +LD R
Sbjct: 216 NTVLMGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLD--RM 273
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ VI +++GF + RV++A ++L+ + CKP+ I Y
Sbjct: 274 PQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLNGML---CKPNTICYNAAL--------- 321
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD--DVLN 335
+ L +A R D + I+ ++ R+ C E +++ + D
Sbjct: 322 ----------KGLCIAQRWEDVGQLIVEMV--RKDCLPNEATFSMLTSCLCQNGLVDCAM 369
Query: 336 ALIGSVSSIDPRSAIVFFNFMI----EKGRV-------------PTLSTLSNLSKNLCKR 378
++ + R V +N +I E+GRV P + + + K LC+
Sbjct: 370 EVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMPCSPDVISFNAALKGLCRA 429
Query: 379 NKSDELVE-VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ D+ E + ++L + +M ++N+++ LC +GR+ A V ++M + G PD+
Sbjct: 430 ERWDDAEELIVQMLREDCPLIEM-TFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVT 488
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
Y+SL+ + L+ A +L+ M C ++ YN ++ E A L NM
Sbjct: 489 YSSLINGLSEQGLVESAIELFQSM---PCKPDIFGYNAVLKGLCRAARWEDAGELISNMA 545
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
K P+ T+ L+ LCQ+ + A EVF +
Sbjct: 546 RKDCPPNEITFNILINSLCQKGLVDRAIEVFEQ 578
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 138/319 (43%), Gaps = 20/319 (6%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L + L +G +D A+++ ++M G + + I+ F E ++ L +L
Sbjct: 355 LTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLL------- 407
Query: 220 NSM-INGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
NSM + VI+ + G C+ +R ++A +++ ++ +C + + I+ + G V
Sbjct: 408 NSMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRV 467
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--N 335
V ++ K G P Y I GL + + A EL + D+ N
Sbjct: 468 NNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQ-----SMPCKPDIFGYN 522
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
A++ G + A + M K P T + L +LC++ D +EV++ +
Sbjct: 523 AVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKY 582
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D+ +YN +++ GRL +A ++ M K PD YNS ++ CR + + A
Sbjct: 583 GSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCK---PDAVSYNSALKGLCRAERWKEA 639
Query: 455 KKLWDQMFASGCSGNLKTY 473
+++ +M C N T+
Sbjct: 640 EEVVAEMLRMKCPPNEVTF 658
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 149/360 (41%), Gaps = 23/360 (6%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+ Y++ LK L ++++ + ++ ++ + + + + L Q A V +
Sbjct: 315 ICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQ 374
Query: 145 V-KFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ K+ C P+ I N+L+ + G +D+ALK+ + M I F + C
Sbjct: 375 MHKYGCR---PDAVIYNTLIYSFSEQGRVDDALKLLNSMP---CSPDVISFNAALKGLCR 428
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ ++ ++ + + +I + ++I C+ RV A +V +++ C PD
Sbjct: 429 AERWDDAEELIVQMLREDCPLI--EMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDI 486
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ Y + G V E ++ + + P Y + GL R +A EL
Sbjct: 487 VTYSSLINGLSEQGLV---ESAIELFQSMPCKPDIFGYNAVLKGLCRAARWEDAGELISN 543
Query: 322 IVSGKFTIDDDVLNALIGSVSS---IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ ++ N LI S+ +D AI F M + G P + T + L ++
Sbjct: 544 MARKDCPPNEITFNILINSLCQKGLVD--RAIEVFEQMPKYGSTPDIFTYNALINGFSEQ 601
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP-DVSF 437
+ D+ ++LS D SYN + LC + R +EA V+ EM R P +V+F
Sbjct: 602 GRLDD---ARRLLSTMSCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTF 658
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y +++ C SGRL +A +I M + PD YN+++ C A+ L +M
Sbjct: 182 TYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEALMAEM 238
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ C N T+ I F + G ++ A++L M + G PD Y++L+ G ++ +
Sbjct: 239 VRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRV 298
Query: 522 QAAFEVFN 529
A E+ N
Sbjct: 299 DDAIELLN 306
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 5/153 (3%)
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N+++ LC RL +A V+ +K G VS +N+L+ CR+ L A++L
Sbjct: 116 NILIKKLCAQRRLADAERVLDALKAAGAADPVS-HNTLVAGYCRDGRLADAERLLAAAGL 174
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
SG + N+ TY LI+ + G + AL L +M VAPD TY ++L GLC +
Sbjct: 175 SG-AANVVTYTTLINGYCRSGRLADALALIASM---PVAPDTYTYNTVLMGLCGARQWED 230
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
A + + V + +T + + C+ L+
Sbjct: 231 AEALMAEMVRNHCPPNEVTFATQIRAFCQNGLL 263
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 87/194 (44%), Gaps = 14/194 (7%)
Query: 76 QQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
Q P + +P ++Y S++ LS + ++S ++ + D Y ++ L +
Sbjct: 476 QMPKYGCTPDIVTYSSLINGLS---EQGLVESAIELFQSMPCKPDIFGYNAVLKGLCRAA 532
Query: 134 NTQKAFSVFNEVKFNCEDIGP-EIC-NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+ A + + + +D P EI N L+ L G +D A+++F++M G
Sbjct: 533 RWEDAGELISNMAR--KDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFT 590
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ I F E +L +L + + +++ S + G C+ +R +EA +V+ E
Sbjct: 591 YNALINGFSEQGRLDDARRLLSTMSCKPDAVSYNSAL-----KGLCRAERWKEAEEVVAE 645
Query: 252 LRIRECKPDFIAYR 265
+ +C P+ + ++
Sbjct: 646 MLRMKCPPNEVTFK 659
>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 129/517 (24%), Positives = 200/517 (38%), Gaps = 101/517 (19%)
Query: 66 LALGFFNW-ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVN----------- 113
L+ F W S PN+ HS S ++L L+ + + L+ +
Sbjct: 65 LSWALFKWIESSVPNYKHSLQSSWTMLYILTKHKHFKTAHAFLENIAFKDFLSTQSVLSS 124
Query: 114 --KITLDSSVYRFIIPSLI----QGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASD 167
KI D V ++ L+ K T +A VF ++ N C LL LA D
Sbjct: 125 LVKIHDDPDVNSHVLSWLVIVYGNSKMTHEAIQVFEHMRVNGFRPHLHACTVLLNSLAKD 184
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
D K++ +M KLG V N V
Sbjct: 185 RLTDTVWKIYKKM----------------------VKLGVV--------------ANIHV 208
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
VL+ H CK VE+A KVL E+ ++ PD Y + + G +E V +
Sbjct: 209 YNVLL-HACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRM 267
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DP 346
G++P Y I G E R+ EA +L I T + +LI + D
Sbjct: 268 EMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDI--KDVTPNHVTYTSLIDGYCRVNDL 325
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A+ M EKG PT+ T YN +
Sbjct: 326 DEALRLKEVMSEKGLYPTVIT-----------------------------------YNSI 350
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC GRLR+A ++ EM + ++PD N+L+ A C+ +R A K+ D+M +G
Sbjct: 351 LRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGL 410
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF- 525
+ TY LI F + EI+ A L M++ G +P TY+ L++ C++ N +A
Sbjct: 411 KLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIK 470
Query: 526 ---EVFNKSVNHDVMLARSILSTFM----ISLCRRVL 555
E+ + + DV + R+++ F I +RVL
Sbjct: 471 LPDELVRRGLCVDVSVYRALIRRFCKIEKIDCAQRVL 507
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/411 (18%), Positives = 168/411 (40%), Gaps = 16/411 (3%)
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
+L SL+ R + + + K++ + + VY ++ + + + +KA V +E++ C
Sbjct: 177 LLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKC 236
Query: 150 EDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
+ P++ N+L+++ G AL + D M G+ + I+ FC ++ +
Sbjct: 237 --VFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMRE 294
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
+ + +++ + V +I G+C+ ++EA ++ + + + P I Y +
Sbjct: 295 AVQLFRDIK----DVTPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSI 350
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
+ G + + ++L + + + P I + A ++ + +V
Sbjct: 351 LRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGL 410
Query: 328 TIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+D ALI ID ++F M++ G P+ T S L + CK+ + +
Sbjct: 411 KLDQFTYKALIHGFCKAKEIDKAKELLFG--MMDAGFSPSYCTYSWLVDSYCKQQNEEAV 468
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+++ L D+ Y ++ C ++ A V+ MK KG+ D Y SL
Sbjct: 469 IKLPDELVRRGLCVDVSVYRALIRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVYTSLAYG 528
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
+ + + D+M+ LK Y + ++ I L LF N
Sbjct: 529 YWKVGKVNVTSDILDEMYKKRLMITLKIYRSFNASYASDNSI---LSLFWN 576
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 133/561 (23%), Positives = 238/561 (42%), Gaps = 68/561 (12%)
Query: 11 TRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGF 70
T+ SQA+ N T P W+ L+ +L +L SLS + V + + L+ + AL F
Sbjct: 63 TKRSQAMARLIN-TEP---WSHELQSSLAELA--PSLSKTTVLQTLQ--LIRTPAKALHF 114
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNK---ITLDSSVYRFIIP 127
F W + FTH+ SY +++ L SR +NA + + ++ + L + +I
Sbjct: 115 FRWVEAK-GFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIR 173
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIG--PEIC--NSLLAVLASDGYIDNALKMFDEM-SH 182
S Q++ VF +K +IG P + NSLL+++ G A ++FDEM
Sbjct: 174 SYGWAGLFQESIKVFKTMK----EIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDT 229
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKR 241
GV T F + I FC N+ + + E+ + + + V+ ++ G C+ +
Sbjct: 230 YGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFK---CDPDVVTYNTLVDGLCRAGK 286
Query: 242 VEEAFKVLDEL--RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
V+ A V+ + + P+ + Y + + + + E +L + G+ P Y
Sbjct: 287 VKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITY 346
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
I GL CEA++L ++ ++L ++G +
Sbjct: 347 NTLIQGL------CEAQKLDKI---------KEILEGMVG------------------DG 373
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G +P TL+ L K C K +E V++ +S D +Y+V+V LC G R A
Sbjct: 374 GFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRA 433
Query: 420 YGVIQEMKRK-------GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
E+ K G P V+ YN + E C + A++++ Q+ G + + +
Sbjct: 434 EEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-TQDPPS 492
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
Y LI G E L ML + PDA TY +++GL ++ + A + K +
Sbjct: 493 YKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKML 552
Query: 533 NHDVMLARSILSTFMISLCRR 553
+ +I + + +L +
Sbjct: 553 KSSHLPTTAIFHSILAALVEK 573
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 85/438 (19%), Positives = 167/438 (38%), Gaps = 83/438 (18%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQ-----VKVNKITLDSSVYRFIIPSLI 130
+ PN + + ++Y ++++ + + + S+L + +K NKIT Y +I L
Sbjct: 300 KSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKIT-----YNTLIQGLC 354
Query: 131 QGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFS 188
+ + K + + + I P+ C N+L+ + G ++ A +F++MS V+
Sbjct: 355 EAQKLDKIKEILEGMVGDGGFI-PDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPD 413
Query: 189 TIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKV 248
+ + V + C+ + DE+ ++E +++H
Sbjct: 414 SATYSVLVRSLCQRGDFRRAEEFFDELAEKE-----------ILLHDV------------ 450
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
CKP AY + E G + E V ++ K G + Y+ ILG
Sbjct: 451 -------GCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPS-YKTLILGHCR 502
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
E +L +++ F D + +I G + DP A M++ +PT +
Sbjct: 503 EGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAI 562
Query: 368 LSNLSKNLCKR---NKSDELVEV--------------------YK------------VLS 392
++ L ++ ++S LV++ YK +L
Sbjct: 563 FHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLY 622
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
N Y ME +VSFLC S +L EA ++ K D+ ++++ C+ +
Sbjct: 623 ENGYLVKMEE---LVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVS 679
Query: 453 PAKKLWDQMFASGCSGNL 470
A L+ ++ G L
Sbjct: 680 EAFALYYELVEKGMQHRL 697
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 194/406 (47%), Gaps = 17/406 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ + D + + +M G+ F + I FC ++ LS+L ++ K
Sbjct: 89 NRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLK 148
Query: 218 ---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+ + GS +++GFC+ RV +A ++D++ +PD +AY + +
Sbjct: 149 LGYEPDRVTIGS-----LVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKT 203
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
V + K+ + G+ P Y + GL R +A L ++ K T +
Sbjct: 204 RRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITY 263
Query: 335 NALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
+AL+ + V + A F M+ P + T S+L LC ++ DE +++ ++ +
Sbjct: 264 SALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 323
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
F D+ SYN +++ C + R+ + + ++M ++GL + YN+L++ + +
Sbjct: 324 KGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDK 383
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A++ + QM + G S ++ TYNIL+ + G +E AL +F +M + + D TYT++++
Sbjct: 384 AQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQ 443
Query: 514 GLCQETNLQAAFEVFN----KSVNHDVMLARSILSTFMISLCRRVL 555
G+C+ ++ A+ +F K + D++ +T M LC + L
Sbjct: 444 GMCKTGKVEDAWGLFCSLSLKGLKPDIV----TYTTMMSGLCTKGL 485
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 170/377 (45%), Gaps = 13/377 (3%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD---EVRKRENSMINGSVIA 229
AL + +M G E + G + FC ++ +S++D E+ R + + +
Sbjct: 139 ALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNA--- 195
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
II CK +RV +A E+ + +P+ + Y + G + +L+ K
Sbjct: 196 --IIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIK 253
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSSIDP- 346
+ P Y + + ++ EAKE+ E +V + +ID D++ ++LI + D
Sbjct: 254 RKITPNVITYSALLDAFVKNGKVLEAKEIFEEMV--RMSIDPDIVTYSSLINGLCLHDRI 311
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A F+ M+ KG P + + + L CK + ++ +++++ +S + +YN +
Sbjct: 312 DEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTL 371
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ G + +A +M G+ PD+ YN L+ C LL A +++ M S
Sbjct: 372 IQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEM 431
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
++ TY +I + G++E A LF ++ KG+ PD TYT+++ GLC +
Sbjct: 432 DLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEA 491
Query: 527 VFNKSVNHDVMLARSIL 543
++ K +M S+L
Sbjct: 492 LYTKMKQEGLMKNDSML 508
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 146/371 (39%), Gaps = 84/371 (22%)
Query: 67 ALGFFNWASQQ---PNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
AL FF ++ PN ++Y +++ L S + N +L+ + KIT + Y
Sbjct: 209 ALDFFKEIGRKGIRPNV----VTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYS 264
Query: 124 FIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEM 180
++ + ++ +A +F E V+ + I P+I +SL+ L ID A +MFD M
Sbjct: 265 ALLDAFVKNGKVLEAKEIFEEMVRMS---IDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
+G + + N++IN GFCK K
Sbjct: 322 VSKGCFPDVVSY---------------------------NTLIN----------GFCKAK 344
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
RVE+ K+ ++ R + + Y + + F +G V + + + GV+P Y
Sbjct: 345 RVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYN 404
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKG 360
+ GL C+ N L+ A+V F M +
Sbjct: 405 ILLGGL------CD--------------------NGLL--------EKALVIFEDMQKSE 430
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
+ T + + + +CK K ++ ++ LS D+ +Y M+S LCT G E
Sbjct: 431 MDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVE 490
Query: 421 GVIQEMKRKGL 431
+ +MK++GL
Sbjct: 491 ALYTKMKQEGL 501
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 191/435 (43%), Gaps = 17/435 (3%)
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--N 158
+AI ++ ++ ++ L Y F + SL + T+ V++++ + + P+ N
Sbjct: 16 DAIQAI-RRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQ--DGLLPDTVTYN 72
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM-----LD 213
+++ +G + A + F + G+E T + +C +L + + L
Sbjct: 73 TMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLM 132
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
++ E S ++I G C K V +A + ++ C P+ A+ +
Sbjct: 133 GCQRNEYSY-------TILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCK 185
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
G V + ++ + GV P Y I+G R+ +A ++ E++ DD
Sbjct: 186 SGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWT 245
Query: 334 LNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N LI + A N +++G PT+ T +NL C K D+ + + + +
Sbjct: 246 YNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMS 305
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ D++ + +++ L RL+EA ++ E+ GL P+V Y S+++ C+ +
Sbjct: 306 SKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDI 365
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A ++ M GC N TYN L+ + ++ A+ L M + G+ P+ TYT+LL+
Sbjct: 366 ALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQ 425
Query: 514 GLCQETNLQAAFEVF 528
G C E + AF +F
Sbjct: 426 GQCDEHDFDNAFRLF 440
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 192/462 (41%), Gaps = 9/462 (1%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
A Q S ++Y++++ S ++N + + ++ N D Y +I L K
Sbjct: 198 AMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK 257
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+ + N VK E P + +L+ D+AL+M ++M +
Sbjct: 258 TEEAEELLNNAVK---EGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 314
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
FG I + +L + +L+E+ N ++ + II G+CK +V+ A +VL
Sbjct: 315 FGKLINSLIKKDRLKEAKELLNEISA--NGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 372
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ C+P+ Y + + + +L K +K G+ P Y + G E
Sbjct: 373 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 432
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
A L E++ D+ L ++ A ++F++ KG T + L
Sbjct: 433 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCK--AGRAEEAYSFIVRKGVALTKVYYTTL 490
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
K +D + + + D +Y+V++ LC RL EA ++ +M +G+
Sbjct: 491 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 550
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
+ Y L++ RE AK+++++M +SG + TY + I+ + + G +E A
Sbjct: 551 KCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAED 610
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
L M +GVAPD TY L++G + AF + V
Sbjct: 611 LILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVG 652
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 169/390 (43%), Gaps = 17/390 (4%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+ AL +F M G + F I C++ ++G + D + + NG V +
Sbjct: 154 VRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQ------NGVVPS 207
Query: 230 VL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER-EVVL 284
V+ +I G+ K R+ +A K+ + + C PD Y + + L E E +L
Sbjct: 208 VMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI--YGLCDQKTEEAEELL 265
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
K G P + I G + + +A + ++S K +D V LI S+
Sbjct: 266 NNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKK 325
Query: 345 DP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
D + A N + G VP + T +++ CK K D +EV K++ + + +Y
Sbjct: 326 DRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTY 385
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N ++ L +L +A ++ +M++ G+ P+V Y +L++ C E A +L++ M
Sbjct: 386 NSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 445
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
+G + Y +L + G E A + ++ KGVA YT+L++G + N
Sbjct: 446 NGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDF 502
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCRR 553
A + + ++ S + +LC++
Sbjct: 503 AATLIERMIDEGCTPDSYTYSVLLHALCKQ 532
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 109/498 (21%), Positives = 202/498 (40%), Gaps = 59/498 (11%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y SI+ S +++ VLK ++ + ++ Y ++ L++ K KA ++
Sbjct: 348 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALL-- 405
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
K + I P + +LL + DNA ++F+ M G++ + V C+
Sbjct: 406 TKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA 465
Query: 203 AKLGQVLS----------------MLDEVRKRENSMINGSVIAVLI-------------- 232
+ + S ++D K N+ ++I +I
Sbjct: 466 GRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVL 525
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
+H CK KR+ EA +LD++ +R K AY I+ +E G + + + G
Sbjct: 526 LHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH 585
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALI---GSVSSIDPR 347
P Y FI E R+ +A++L ++ + + DV+ N LI G + ID
Sbjct: 586 KPSATTYTVFINSYCKEGRLEDAEDL--ILKMEREGVAPDVVTYNILIDGCGHMGYID-- 641
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN----KSDELVEVYKVLSANDYFTDME-- 401
A M+ P T L K+L K N +S + ++ ++ + + +E
Sbjct: 642 RAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERM 701
Query: 402 ----------SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+Y+ +++ C +GRL EA ++ M KGL P+ Y L++ CC
Sbjct: 702 VKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFF 761
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A M G L++Y +L+ G+ E LF ++LE G D + L
Sbjct: 762 EKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKIL 821
Query: 512 LEGLCQETNLQAAFEVFN 529
+GL + + F++ +
Sbjct: 822 NDGLLKAGYVDICFQMLS 839
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 101/517 (19%), Positives = 217/517 (41%), Gaps = 34/517 (6%)
Query: 56 INPYLLTHHSLALGFFNWASQQPN---FTHSPL--------SYHSILKSLSLSRQINAID 104
+ P T ++L LG+ + F PL SY +++ L ++ +
Sbjct: 99 LEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKAL 158
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLA 162
+ +K + + + + F+I L + A +F+ + N + P + N+++
Sbjct: 159 VLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQN--GVVPSVMTYNAMIV 216
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
+ G +++ALK+ + M G + I+ C+ K + +L+ K
Sbjct: 217 GYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKE--GF 273
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
V +I+G+C ++ ++A ++ +++ +CK D + KL+ S+ +++
Sbjct: 274 TPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFG------KLINSLIKKDR 327
Query: 283 VLKKKRKL------GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ + K L G+ P Y I G ++ A E+ +++ + N+
Sbjct: 328 LKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS 387
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
L+ G V A+ M + G +P + T + L + C + D +++++ N
Sbjct: 388 LMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNG 447
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D +Y V+ LC +GR EAY I RKG+ +Y +L++ + A
Sbjct: 448 LKPDEHAYAVLTDALCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAA 504
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L ++M GC+ + TY++L+ + + AL + M +G+ YT L++ +
Sbjct: 505 TLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEM 564
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+E A ++N+ + + + + F+ S C+
Sbjct: 565 LREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCK 601
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/441 (20%), Positives = 180/441 (40%), Gaps = 43/441 (9%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+ FT + +++ +++ ++ + + + ++ +K LD V+ +I SLI+ +
Sbjct: 270 KEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLK 329
Query: 137 KAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+A + NE+ N + P + S++ G +D AL++ M G + + +
Sbjct: 330 EAKELLNEISAN--GLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS 387
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
++ ++ KL + +++L +++K + +I + ++ G C + AF++ + +
Sbjct: 388 LMYGLVKDKKLHKAMALLTKMQK--DGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 445
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
KPD AY ++ + G E + +K GVA Y I G
Sbjct: 446 NGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK---GVALTKVYYTTLIDGF-------- 494
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+ + A MI++G P T S L
Sbjct: 495 --------------------------SKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHA 528
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK+ + +E + + +S + +Y +++ + G+ A + EM G P
Sbjct: 529 LCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPS 588
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+ Y + + C+E L A+ L +M G + ++ TYNILI +G I+ A
Sbjct: 589 ATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLK 648
Query: 495 NMLEKGVAPDATTYTSLLEGL 515
M+ P+ TY LL+ L
Sbjct: 649 RMVGASCEPNYWTYCLLLKHL 669
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 122/281 (43%), Gaps = 8/281 (2%)
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
MG V+ + V + G+ P T Y I E + A +++ G +
Sbjct: 52 MGRVYSQLV------QDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFT 105
Query: 334 LNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
NAL+ G + + R A F M G + + L + LC + + ++ ++
Sbjct: 106 CNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMK 165
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ ++ ++ ++S LC SGR+ +A + M + G+ P V YN+++ + +
Sbjct: 166 RDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMN 225
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A K+ + M +GC + TYN LI + + E A L +N +++G P T+T+L+
Sbjct: 226 DALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLI 284
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
G C A + NK ++ L + + SL ++
Sbjct: 285 NGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKK 325
>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 822
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 216/498 (43%), Gaps = 79/498 (15%)
Query: 36 QTLHQLGLRDSLSPSLVARVINPYLLTHHSLALG--FFNWASQQPNFTHSPL---SYHSI 90
Q+ H L R + S +V+ V + + H+ G FF+WAS P F+ SPL +Y S+
Sbjct: 42 QSHHSLQSRFAESQIIVSNVAHFVIDRIHNPQHGLYFFHWASTLP-FS-SPLNNVAYSSL 99
Query: 91 LKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCE 150
LK + R + I+ VL+ +K +I + KA +F V CE
Sbjct: 100 LKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYMV---CE 156
Query: 151 DIGPEIC----NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
C NSLL L +G +D A +++D+M RG +
Sbjct: 157 LYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHG------------------ 198
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
LD V + N S+ V+++ G C +VEE K++D+ C P+ + Y +
Sbjct: 199 -----LDLV------VDNYSI--VIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNV 245
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ + + G + V ++ + G P Y I G C+A GK
Sbjct: 246 IIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGF------CKA---------GK 290
Query: 327 FTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
F + D +LN + +V ++ + FN +I+ K D+ E
Sbjct: 291 FQVVDQLLNEM--NVMGLNVNVKV--FNSIIDAKY---------------KYGLVDKAAE 331
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
+ ++++ D+ +YN++++F C+ GR++EA ++ K + L P+ Y LM A C
Sbjct: 332 MMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYC 391
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
++ A + ++ +G +L +Y I GEI+ AL + M+EKGV PDA
Sbjct: 392 KQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQ 451
Query: 507 TYTSLLEGLCQETNLQAA 524
Y L+ GLC++ AA
Sbjct: 452 IYNVLMSGLCKKGRFPAA 469
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 177/435 (40%), Gaps = 3/435 (0%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y+ I+ + V +++K+ Y +I + Q + NE+
Sbjct: 243 YNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMN 302
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
++ ++ NS++ G +D A +M M+ G E + + I C ++
Sbjct: 303 VMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIK 362
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ L+ R +E +++ ++H +CK A +L ++ KPD ++Y
Sbjct: 363 EAEEFLE--RAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGA 420
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
G + +V +K + GV P Y + GL + R AK L ++
Sbjct: 421 FIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLN 480
Query: 327 FTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
D + L+ G + + + A F ++ KG P + + + K LCK K + V
Sbjct: 481 LQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAV 540
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
+ ++ D +++ ++ L A + +M ++ P+V Y SL+
Sbjct: 541 SYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGF 600
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+ + A+K++ M + N+ TY ILI FS+ G+ E A F ML P+
Sbjct: 601 CKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPND 660
Query: 506 TTYTSLLEGLCQETN 520
TT+ L+ GL TN
Sbjct: 661 TTFHYLINGLTNITN 675
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 6/211 (2%)
Query: 349 AIVFFNFMIEKGRVPTLS-TLSNLS-----KNLCKRNKSDELVEVYKVLSANDYFTDMES 402
A ++ M+E+G L + N S K LC K +E ++ N ++
Sbjct: 183 ACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVF 242
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YNV++ C G L+ A V +E+K KG P + Y +L++ C+ + +L ++M
Sbjct: 243 YNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMN 302
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G + N+K +N +I + G ++ A + M E G PD TTY L+ C ++
Sbjct: 303 VMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIK 362
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
A E ++ ++ + + M + C++
Sbjct: 363 EAEEFLERAKERTLLPNKFSYTPLMHAYCKQ 393
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 92/485 (18%), Positives = 184/485 (37%), Gaps = 60/485 (12%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +++ + + +D +L ++ V + ++ V+ II + + KA + +
Sbjct: 277 TYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMM 336
Query: 146 -KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ CE P+I N L+ S G I A + + R + + + + +C+
Sbjct: 337 TEMGCE---PDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQ 393
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
ML ++ + + S A IHG G ++ A V +++ + PD
Sbjct: 394 GDYVMASDMLFKIAETGDKPDLVSYGA--FIHGSVAGGEIDVALMVREKMMEKGVFPDAQ 451
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y ++ G +++L + L + P Y + G I + +A EL EV+
Sbjct: 452 IYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVV 511
Query: 323 VSGKFTIDDDVL--NALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+S ID V+ N +I + + A+ + N M P T S + K++
Sbjct: 512 MSK--GIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQH 569
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
D ++++ + Y ++ +Y +++ C + A V + M+ L+P+V Y
Sbjct: 570 DLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYT 629
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV---------------- 483
L+ + A ++ M + C N T++ LI+ + +
Sbjct: 630 ILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRS 689
Query: 484 -------------------------------GEIEGALRLFHNMLEKGVAPDATTYTSLL 512
G ++ A L ML KG D+ +++LL
Sbjct: 690 LILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALL 749
Query: 513 EGLCQ 517
GLCQ
Sbjct: 750 HGLCQ 754
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 120/275 (43%), Gaps = 20/275 (7%)
Query: 167 DGYI-----DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
DG+I D A ++F+ + +G++ +G+ V I C+ K+ +S +++++ ++
Sbjct: 493 DGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHA 552
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
+I G+ K ++ A K+ ++ ++ KP+ +AY + F + + E
Sbjct: 553 --PDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAE 610
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
V + + + P Y I G + +A E+++ +D + LI +
Sbjct: 611 KVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGL 670
Query: 342 SSI------------DPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
++I + RS I+ FF MI +G ++T +++ LCK D +
Sbjct: 671 TNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQ 730
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ + D ++ ++ LC +G+ +E +I
Sbjct: 731 TKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRNII 765
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 171/371 (46%), Gaps = 11/371 (2%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
AL +M G E S + FG + FC ++ + +S++D++ VI I
Sbjct: 127 ALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYE--PNVVIYNTI 184
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I C+ ++V+ A VL+ + +PD I Y + G +L ++G+
Sbjct: 185 IDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGI 244
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSV---SSIDPR 347
P + I E ++ EAK+ + ++ + ++D +++ N+LI + +D
Sbjct: 245 HPDVITFSAMIDVFGKEGQLLEAKKQYDEMI--QRSVDPNIVTYNSLINGLCIHGLLDEA 302
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
++ NFM+ KG P T + L CK + D+ +++ V+S + D +YN +
Sbjct: 303 KKVL--NFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLY 360
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
C +G+ A V+ M G+ PD+ +N L++ C + A + + S
Sbjct: 361 QGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETV 420
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
+ TYNI+I + ++E A LF ++ KGV+PD TYT+++ GL ++ A E+
Sbjct: 421 VGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHEL 480
Query: 528 FNKSVNHDVML 538
+ K D ++
Sbjct: 481 YRKMKKDDGLM 491
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 121/273 (44%), Gaps = 5/273 (1%)
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS- 342
L K KLG P + + G RI EA L + IV + + + N +I S+
Sbjct: 131 LGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 190
Query: 343 --SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+D +A+ N M + G P + T ++L L K + + D+
Sbjct: 191 NRQVD--TALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDV 248
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+++ M+ G+L EA EM ++ +DP++ YNSL+ C LL AKK+ +
Sbjct: 249 ITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNF 308
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M + G N TYN L++ + + ++ A+++ M GV D TY +L +G CQ
Sbjct: 309 MVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQ 368
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
AA +V + V+ V+ + + LC
Sbjct: 369 FNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEH 401
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 89/191 (46%)
Query: 325 GKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
G F+ D L + SI A+ F M E +P++ S L + K K + +
Sbjct: 33 GAFSGGSDYRERLRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAV 92
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+ +++ + D+ S++ ++ C RL A + +M + G +P + + SL+
Sbjct: 93 ISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNG 152
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C + ++ A L DQ+ G N+ YN +I E +++ AL + ++M + G+ PD
Sbjct: 153 FCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPD 212
Query: 505 ATTYTSLLEGL 515
TY SL+ L
Sbjct: 213 VITYNSLITRL 223
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 2/161 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ +D+A+K+ MSH GV+ T + +C+ + +L R
Sbjct: 322 NTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVL--ARM 379
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ +++ G C+ ++E+A L++L+ E I Y I+ + V
Sbjct: 380 VSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKV 439
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
+ + GV+P Y ++GL +R EA EL
Sbjct: 440 EDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHEL 480
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/496 (21%), Positives = 216/496 (43%), Gaps = 16/496 (3%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQ-QPNFTHSPLSYHSILKSLSLSRQI- 100
LR + +++ V+N L H + LGF A + + + ++++L+ L ++
Sbjct: 101 LRIPVHEFILSIVVNSCCLMHRT-DLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVK 159
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSL 160
+A+ K V+ N + +Y ++ L + +TQKAF + ++ I + +
Sbjct: 160 DAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIV 219
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
+ DG +D A + +EM + + + I C+ LS + VR
Sbjct: 220 IDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCK-------LSQWENVRTLFL 272
Query: 221 SMINGSVIAVL-----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
MI+ ++ + +I G CK +VE+A +++ + + PD I Y ++ + + L G
Sbjct: 273 EMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRG 332
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
V + + P Y I G +++I EA ++ I N
Sbjct: 333 QVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCN 392
Query: 336 ALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
L+ + + +SA FF+ M+ G +P L T L K +E + + L
Sbjct: 393 VLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERR 452
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
T+++ Y ++ LC +G+L +A+ +++ GL PDV Y +++ C+E LL A
Sbjct: 453 REDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA 512
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K + +M +GC + +TYN+++ F ++ + K + +A T L++
Sbjct: 513 KDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDI 572
Query: 515 LCQETNLQAAFEVFNK 530
+ ++ +L F++
Sbjct: 573 IAEDPSLLNMIPEFHR 588
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 114/244 (46%), Gaps = 7/244 (2%)
Query: 300 REFILGLIVERR-ICEAKELGEVIVSGKFT----IDDDVLNALI-GSVSSIDPRSAIVFF 353
EFIL ++V + +LG +++ F + + N L+ G + + A+ F
Sbjct: 106 HEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLF 165
Query: 354 NFMIEKGRV-PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
++ + P + LCK+ + + ++ +++ + Y++++ C
Sbjct: 166 KKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCK 225
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G L A ++ EMK+K + PD+ Y++L++A C+ + L+ +M N+ T
Sbjct: 226 DGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCT 285
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
+N +I + G++E A + M+EKGV PD TY +++G + A E+F+ +
Sbjct: 286 FNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMI 345
Query: 533 NHDV 536
N +
Sbjct: 346 NKSI 349
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 103/218 (47%), Gaps = 2/218 (0%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLS-TLSNLSKNLCKRNKSDELVEVYKVLSAND 395
L+ ++ + S++V I K R+P LS + + C +++D V +
Sbjct: 78 LLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKG 137
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL-DPDVSFYNSLMEACCREDLLRPA 454
+ +N ++ L ++++A + +++ R+ + +P+ Y ++M C++ + A
Sbjct: 138 IPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKA 197
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
L M N Y+I+I F + G ++GA L + M +K + PD TY++L++
Sbjct: 198 FDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDA 257
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
LC+ + + +F + ++ ++ ++ + LC+
Sbjct: 258 LCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCK 295
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 124/551 (22%), Positives = 221/551 (40%), Gaps = 55/551 (9%)
Query: 24 TRPARKWTPLLEQTLHQLGLRDSLSPS----LVARVINPYLLTHHSLALGFFNWASQQPN 79
+RP + P L+ L S++PS L A ++P AL FFNW Q+
Sbjct: 58 SRPNWQKHPSLKN------LIPSIAPSHISALFALNLDP------QTALAFFNWIGQKHG 105
Query: 80 FTHSPLSYHSILKSL------------------SLSRQINAI------DSVLKQVKVNKI 115
F H+ S+ S+L L S NA+ S+ ++V K
Sbjct: 106 FKHNVQSHVSMLNILVPNGYLRIAENMRILMIKSTDSSENALFVLEMLRSMNRRVDAFKF 165
Query: 116 TLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCED-IGPEI--CNSLLAVLASDGYIDN 172
L Y ++ L + + SV+ E+ +D + P I N+++ G +
Sbjct: 166 KLTLRCYNMLLMLLSRFLMIDEMKSVYLEM---LDDMVTPNIFTLNTMVNGYCKLGNVVE 222
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A ++ G+ T + I +C N + ++ + + + V +
Sbjct: 223 AELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNK--GCLRNEVSYTNL 280
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
IHGFC+ +RV+EA K+ ++ C P Y ++ +G E + K+ +
Sbjct: 281 IHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHC 340
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIV 351
P + Y I L + +AK++ ++ NALI G SA+
Sbjct: 341 QPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALE 400
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
+ M P T + L C+ + + + + ++ +YN+++ C
Sbjct: 401 ILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQC 460
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
G L AY ++ M GL PD Y+ ++ C+ L+ A+ L++ + G N
Sbjct: 461 KEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEV 520
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
Y+ LI + +VG++ L ML G P++ TY SL++G C+E N + A +
Sbjct: 521 IYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLV--- 577
Query: 532 VNHDVMLARSI 542
D+M+ R I
Sbjct: 578 ---DIMIKRDI 585
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 180/445 (40%), Gaps = 24/445 (5%)
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVF----------NEVKFNCEDIGPEICNSLLAVL 164
++LD+ Y +I + KN A ++F NEV + +L+
Sbjct: 235 LSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYT----------NLIHGF 284
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
+D ALK+F +M + + V I+ C+ + + L+M E+ ++ + N
Sbjct: 285 CEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEK-HCQPN 343
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
VLI C+ ++A K+L+ + + P + Y + + + G +L
Sbjct: 344 VHTYTVLIC-SLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEIL 402
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSS 343
+P Y E ILG + I +A L ++ K + N LI G
Sbjct: 403 SLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKE 462
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
D SA + M E G VP T S LCKR +E +++ L + Y
Sbjct: 463 GDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIY 522
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+ ++ C G++ + ++ +M G P+ YNSL++ C+E + A+ L D M
Sbjct: 523 STLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIK 582
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
TY ILI + E + A +F ML G PD YT+ + C L+
Sbjct: 583 RDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKD 642
Query: 524 AFEVFNKSVNHDVMLARSILSTFMI 548
A EV +N ++ ++L T I
Sbjct: 643 A-EVLICKMNAKGIMPDTMLYTLFI 666
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 179/432 (41%), Gaps = 3/432 (0%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY +++ +R+++ + Q+ + Y II +L Q +A ++F E
Sbjct: 275 VSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKE 334
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ L+ L D D+A K+ + M +G+ S + + I +C+
Sbjct: 335 MTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGL 394
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L +L + + N N LI+ GFC+GK + +A +L ++ R+ +P+ + Y
Sbjct: 395 SASALEIL-SLMESNNCSPNARTYNELIL-GFCRGKNIHKAMSLLHKMLERKLQPNVVTY 452
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
I+ G + +L + G+ P Y FI L + EA+ L E +
Sbjct: 453 NILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKE 512
Query: 325 GKFTIDDDVLNALIGSVSSIDPRSAIVFF-NFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
++ + + LI + S F + M+ G VP T ++L CK E
Sbjct: 513 KGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKE 572
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ ++ D ++Y +++ L +A+ + +M G PDV Y + +
Sbjct: 573 ARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIH 632
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
A C L+ A+ L +M A G + Y + I + G I+GA + M E G P
Sbjct: 633 AYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEP 692
Query: 504 DATTYTSLLEGL 515
TY+ L++ L
Sbjct: 693 SYYTYSCLIKHL 704
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 151/317 (47%), Gaps = 3/317 (0%)
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
++E V E+ P+ + + +G+V E E+ + K + G++ T Y
Sbjct: 185 IDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTS 244
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDV--LNALIGSVSSIDPRSAIVFFNFMIEK 359
ILG + + A + + + K + ++V N + G + A+ F+ M E
Sbjct: 245 LILGYCRNKNVDAANAIF-LSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHED 303
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
PT+ T + + LC+ + E + ++K ++ ++ +Y V++ LC +A
Sbjct: 304 NCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDA 363
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
++ M KGL P V YN+L++ C++ L A ++ M ++ CS N +TYN LI
Sbjct: 364 KKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILG 423
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
F I A+ L H MLE+ + P+ TY L+ G C+E +L +A+++ + ++
Sbjct: 424 FCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPD 483
Query: 540 RSILSTFMISLCRRVLI 556
S F+ +LC+R L+
Sbjct: 484 EWTYSVFIDTLCKRGLV 500
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 170/383 (44%), Gaps = 3/383 (0%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D A +F M ++G + + + I FCE ++ + L + ++ E++
Sbjct: 255 VDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMH--EDNCWPTVRTY 312
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+II C+ R EA + E+ + C+P+ Y ++ + + + +L +
Sbjct: 313 TVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLE 372
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRS 348
G+ P Y I G + A E+ ++ S + + N LI G +
Sbjct: 373 KGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHK 432
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ + M+E+ P + T + L CK ++ +++ + D +Y+V +
Sbjct: 433 AMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFID 492
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G + EA + + +K KG+ + Y++L++ C+ + + L D+M ++GC
Sbjct: 493 TLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVP 552
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N TYN LI + + + A L M+++ + P A TYT L++ L ++ A ++F
Sbjct: 553 NSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMF 612
Query: 529 NKSVNHDVMLARSILSTFMISLC 551
++ ++ I + F+ + C
Sbjct: 613 DQMLSTGSHPDVFIYTAFIHAYC 635
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 100/479 (20%), Positives = 186/479 (38%), Gaps = 75/479 (15%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAV 163
+L ++ N + ++ Y +I +GKN KA S+ + K + P + N L+
Sbjct: 401 ILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLH--KMLERKLQPNVVTYNILIHG 458
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
+G + +A K+ M+ G+ + VFI C+ + + S+ + ++ E +
Sbjct: 459 QCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLK--EKGIK 516
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
VI +I G+CK +V + +LD++ C P+ I Y + + + + E ++
Sbjct: 517 ANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLL 576
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL------------------------- 318
+ K + P + Y I L+ + +A ++
Sbjct: 577 VDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCS 636
Query: 319 ------GEVIV---SGKFTIDDDVLNALI----GSVSSIDPRSAIVFFNFMIEKGRVPTL 365
EV++ + K + D +L L G SID A M E G P+
Sbjct: 637 HGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSID--GAFGILKRMHEVGCEPSY 694
Query: 366 STLSNLSKNL----------------------------CKRNKSDEL-VEVYKVLSANDY 396
T S L K+L C R E ++++ ++ +
Sbjct: 695 YTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGC 754
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ +Y ++ LC G L A+ + MK KG P+ YNSL+ C+ L A +
Sbjct: 755 APNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIR 814
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
D M + +L + +L+ + G E A R+F + L+ D + L++GL
Sbjct: 815 WLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGL 873
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 132/365 (36%), Gaps = 81/365 (22%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ L D D A MFD+M G + FI +C + +L ++ ++ +
Sbjct: 595 LIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAK- 653
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR-------------- 265
++ +++ L I + + ++ AF +L + C+P + Y
Sbjct: 654 -GIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEV 712
Query: 266 ------------IVAEEFKLMGSVFEREVVLK---KKRKLGVAPRTNDYREFILGL---- 306
+ + +F + E L K + G AP N Y +FI GL
Sbjct: 713 SSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVG 772
Query: 307 ---IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRV 362
+ R KE G+ + ++D+ N+L+G + AI + + MIE +
Sbjct: 773 CLEVAHRLFDHMKEKGQ-------SPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHL 825
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P L + L L ++ V+ +Y +Y+ MV + G L+
Sbjct: 826 PHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEY-----NYDEMVWKVLIDGLLK----- 875
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
KGL S +ME GC + KTY++LI F
Sbjct: 876 ------KGLSDKCSDLFGIMET-------------------QGCQIHPKTYSMLIEGFDG 910
Query: 483 VGEIE 487
+ EI+
Sbjct: 911 IQEID 915
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 100/235 (42%), Gaps = 25/235 (10%)
Query: 343 SIDPRSAIVFFNFMIEK--------GRVPTLSTL---------SNLSKNLCKRNKSDE-- 383
++DP++A+ FFN++ +K V L+ L N+ + K S E
Sbjct: 87 NLDPQTALAFFNWIGQKHGFKHNVQSHVSMLNILVPNGYLRIAENMRILMIKSTDSSENA 146
Query: 384 ------LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
L + + + A + + YN+++ L + E V EM + P++
Sbjct: 147 LFVLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFT 206
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
N+++ C+ + A+ ++ +G S + TY LI + ++ A +F +M
Sbjct: 207 LNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMP 266
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
KG + +YT+L+ G C+ + A ++F++ + + + +LC+
Sbjct: 267 NKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQ 321
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 110/506 (21%), Positives = 210/506 (41%), Gaps = 80/506 (15%)
Query: 63 HHSLALGFFNWASQ--QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS 120
HH+ A F N ++ +PN + S++ + +++R + S +++K I L
Sbjct: 294 HHARAT-FENMRARGIEPN----AFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIV 348
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
Y +I + +TQ A ++F E K N D+ I ++++ G +D A ++ EM
Sbjct: 349 TYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEM 408
Query: 181 SHRGVEF-----------------------------------STIGFGVFIWKFCENAKL 205
G++ S I +G I + + K+
Sbjct: 409 EEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKV 468
Query: 206 GQVLSMLDEVRKRENSMI-NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ +++ E+ E+S I + + ++I GF AF++ +E+ +PD Y
Sbjct: 469 AKAIAISKEM---ESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIY 525
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
++ E F MG++ +L+K +K + P +R I G V
Sbjct: 526 NLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAV---------------- 569
Query: 325 GKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ D + A+ + M G PT+ T + L L ++N+ +
Sbjct: 570 ------------------AGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERA 611
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
V V +S + +Y +++ +G + +A+ ++K GL DV Y +L+ A
Sbjct: 612 VSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRA 671
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
CC+ ++ A + +M + + N YNILI ++ G++ A L M E GV P+
Sbjct: 672 CCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPN 731
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNK 530
TYTS + C+ ++Q A V ++
Sbjct: 732 IHTYTSYINACCKAGDMQRAQTVIDE 757
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/398 (19%), Positives = 157/398 (39%), Gaps = 38/398 (9%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+ SL+ A + AL +EM G+E + + + + I F + ++ E
Sbjct: 314 VFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEA 373
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ + NG +I IIH C+ ++ A +++ E+ AY + + ++
Sbjct: 374 KTNLGDL-NG-IIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQ 431
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ +V ++ ++ P Y I + ++ +A + + + S ++ +
Sbjct: 432 DEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYS 491
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
LI G + D +A F M++ G P
Sbjct: 492 MLISGFIHLHDFTNAFRIFEEMLKSGLQP------------------------------- 520
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D YN+++ C G + A ++++M+++ + P + ++E ++ A
Sbjct: 521 ----DRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRA 576
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+ D M SGC+ + TYN LI ++E A+ + + M G+ P+ TYT ++ G
Sbjct: 577 LDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRG 636
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++ AFE F K + L I T + + C+
Sbjct: 637 YAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCK 674
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+ +M+ + G A + M+ +G++P+ + SL+ A +R A ++M
Sbjct: 280 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMK 339
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
A G + TY+ILIS F ++ + + A LF + Y++++ CQ N+
Sbjct: 340 AEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMD 399
Query: 523 AAFEVFNK 530
A E+ ++
Sbjct: 400 RAEELVHE 407
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 118/276 (42%), Gaps = 19/276 (6%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++++ L Q+ SVL ++ + IT + Y I+ + KAF F +
Sbjct: 593 MTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTK 652
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI--WKFCEN 202
+K + I +LL G + +AL + EMS + + +T + + I W
Sbjct: 653 IKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGW----- 707
Query: 203 AKLGQVLSMLDEVRK-RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
A+ G V D +++ +E+ + I+ CK ++ A V+DE+ KP+
Sbjct: 708 ARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNL 767
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKL-GVAPRTNDYREFILGLIVERRICEAKELGE 320
Y + + + S+ +R + ++ KL G+ P Y + L+ + E
Sbjct: 768 KTYTTLIKGWA-RASLPDRALKCFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEGSTYTG 826
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFM 356
++ + ++D+ ++D R+A+ + ++
Sbjct: 827 ILSVCREMFENDL---------TVDMRTAVHWSRWL 853
>gi|307136214|gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 653
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 125/528 (23%), Positives = 236/528 (44%), Gaps = 34/528 (6%)
Query: 28 RKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSY 87
R+W LEQ + SL+ SLV RV+ + LAL F+NW + NF+HS S
Sbjct: 44 RRW-KFLEQ------VSPSLTNSLVCRVVREFR-NSPQLALEFYNWVEARDNFSHSLESC 95
Query: 88 HSILKSLSLSRQINAIDSVLKQ--VKVNKITLD---------------SSVYRFIIPSLI 130
+++ L SR N S+++ +K K L+ +V+ ++ +
Sbjct: 96 CTLVHVLVNSRNFNDALSIMESLMLKNGKSPLEVLGGLMNSYEICNSNPAVFDALVRTCT 155
Query: 131 QGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTI 190
Q K+ + A+ V +++ + N+ L +L G D M+ EM G +
Sbjct: 156 QLKSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDKFWNMYMEMVASGYSENVN 215
Query: 191 GFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVL 249
F + I+ C+ KL + +S++ + K E I +V++ +II K ++ A K+
Sbjct: 216 TFNLIIYALCKECKLLEAISVVYLMLKIE---IWPNVVSFNMIIDKASKMGEMDLALKLT 272
Query: 250 DELRI---RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
+ P+ + Y + F + + + VL + KLG+ Y I G
Sbjct: 273 RNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDSNERTYAPLIDGY 332
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTL 365
+ + A L + +V + D V N+LI + + A + MI + +P
Sbjct: 333 ARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDMINRRILPDE 392
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
T S L+K LC ++ + V+ + + D ++N++++++ S + A ++
Sbjct: 393 FTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGAKQLLSS 452
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M +G+ PD+ Y +L+ C+E + A +++D+ + NL YN ++ + G
Sbjct: 453 MIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGS 512
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
I+ A RL + L++ D+ TY +LL G C ++ AF +F + +N
Sbjct: 513 IDAA-RLLVDKLQQNGFLDSVTYNTLLHGFCVNGEVEKAFALFLEMIN 559
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 149/322 (46%), Gaps = 7/322 (2%)
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
++ VI ++I GFC+ + +A +V DE+ C PD + Y + + +
Sbjct: 11 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-G 339
E +L + R+ GV P + I G +E ++ +A +L + +++ + D N LI G
Sbjct: 71 EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 130
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
D A ++ M + P T S L + C++ + ++ + +
Sbjct: 131 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 190
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ +YN ++ C SG + + +Q+M + PD+ YN+L+ +ED + A KL +
Sbjct: 191 IMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLN 250
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
M ++ TYN+LI+ FS G ++ A +F M KG+ PD TY S++ G
Sbjct: 251 MMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAG 310
Query: 520 NLQAAFEVFNKSVNHDVMLARS 541
N + AF++ HD ML R
Sbjct: 311 NSKEAFQL------HDEMLQRG 326
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 95/191 (49%), Gaps = 4/191 (2%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G VP + + C+ + + V + D+ +YN +++ LC RL +A
Sbjct: 11 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
G++ EM+ +G+ PD+ + +L+ C E L A +L+D M ++ TYN LI
Sbjct: 71 EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 130
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF----EVFNKSVNHD 535
G+++ A L+ +M + + P+ TY+ L++ C++ ++ AF E+ NK + +
Sbjct: 131 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 190
Query: 536 VMLARSILSTF 546
+M SI+ +
Sbjct: 191 IMTYNSIIKGY 201
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 81/151 (53%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y +++ C +G + +A V EM G PDV YN+L+ C+E L A+ L ++M
Sbjct: 19 YTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMR 78
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G +L T+ LI + G+++ AL+LF ML + + PD TY +L++G+C++ +L
Sbjct: 79 ERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLD 138
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
A ++++ + ++ S + S C +
Sbjct: 139 KANDLWDDMHSREIFPNHVTYSILIDSHCEK 169
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 140/337 (41%), Gaps = 9/337 (2%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLA 162
+ L++++ + D +Y +I + A V +E+ C + P++ N+LL
Sbjct: 2 AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM-VGCGCL-PDVVTYNTLLN 59
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
L + + +A + +EM RGV F I +C KL + L + D + N
Sbjct: 60 GLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML---NQR 116
Query: 223 INGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
+ ++ +I G C+ +++A + D++ RE P+ + Y I+ + G V +
Sbjct: 117 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF 176
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GS 340
L + G+ P Y I G + + ++ + ++ K + D N LI G
Sbjct: 177 GFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 236
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ A N M ++ P + T + L E +++ + A D
Sbjct: 237 IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 296
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+Y M++ T+G +EA+ + EM ++G PD F
Sbjct: 297 YTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDDKF 333
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%)
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
++EM+ GL PD Y ++ CR L+ A ++ D+M GC ++ TYN L++ +
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
+ A L + M E+GV PD T+T+L+ G C E L A ++F+ +N +
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 543 LSTFMISLCRR 553
+T + +CR+
Sbjct: 124 YNTLIDGMCRQ 134
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 124/283 (43%), Gaps = 39/283 (13%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSL-IQGKNTQKAFSVFN 143
++Y+++L L R++ + +L +++ + D + +I I+GK KA +F+
Sbjct: 52 VTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGK-LDKALQLFD 110
Query: 144 EVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ N + + P+I N+L+ + G +D A ++D+M R + + + + + I CE
Sbjct: 111 TM-LN-QRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCE 168
Query: 202 NAKLGQVLSMLDEVRKRE--------NSMINGS-------------------------VI 228
++ LDE+ + NS+I G +
Sbjct: 169 KGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLIT 228
Query: 229 AVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+IHG+ K ++ +AFK+L+ + + +PD + Y ++ F + G+V E + +K
Sbjct: 229 YNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMC 288
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
G+ P Y I G + EA +L + ++ F DD
Sbjct: 289 AKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 331
>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
Length = 735
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 128/531 (24%), Positives = 223/531 (41%), Gaps = 12/531 (2%)
Query: 8 DLATRISQAIISASNRTRPAR-KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSL 66
DLA + ++ + R R W+ LE L L LR +++PS V V+
Sbjct: 51 DLAEELRSRLVRDTCRLLELRDSWSAKLEAQLRHL-LR-AMTPSQVRAVLRAQAQRDARA 108
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A FF WA +Q + H+P + +L LS +R + V++ + + + + ++
Sbjct: 109 AFEFFRWADRQWKYRHAPEVFDEMLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLM 168
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRG 184
S + + A V ++ + P+IC N + VL G ID AL+ + M G
Sbjct: 169 LSYSRAGKLRSAMRVLQLMQK--DGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVG 226
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
V+ + + I C ++ L M+ + +N + + ++ CK KRV +
Sbjct: 227 VDPDVVTYNCLIKGLCGARRIVDALEMISSML--QNGCLPDKISYFTVMSFLCKEKRVAD 284
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
+L+ + PD + Y ++ G E L++ Y +
Sbjct: 285 VQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVH 344
Query: 305 GLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRV 362
+ R+ EAKE+ GE+I G D +A++ I + A M + G
Sbjct: 345 SFCLNGRMAEAKEIIGEMISKG-CRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCK 403
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P T + L LCK KS E E+ + +Y+V++ G+L+E+ V
Sbjct: 404 PNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDV 463
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ +M +KG P N L+ A C E AK +Q + GC N+ + +I FS
Sbjct: 464 VMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSR 523
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
G++E AL L +M PD TYT +++ L ++ ++ A + K +N
Sbjct: 524 QGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLN 574
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 189/447 (42%), Gaps = 23/447 (5%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY +++ L +++ + ++L+++ I D Y +I L + + +A S E
Sbjct: 267 ISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRE 326
Query: 145 V---KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+F +++G ++ + +G + A ++ EM +G + + + FC
Sbjct: 327 SEGKRFRVDEVGY---SATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCR 383
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+L Q M+ + K N +V +++G CK + EA+++L++ P
Sbjct: 384 IGELDQARKMMKHMYK--NGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSA 441
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
I Y +V F+ G + E V+ + + G P T + I L ER+ +AK+ E
Sbjct: 442 ITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQ 501
Query: 322 IVS-GKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
S G F + + G D SA+ + M R P + T + + L ++ K
Sbjct: 502 CQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGK 561
Query: 381 SDELVE-VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM-KRKGLDPDVSFY 438
E V K+L+ + T + +Y ++ C G + + ++ +M ++G S Y
Sbjct: 562 MKEATSLVEKMLNRGLHPTPV-TYRTVIHRYCEKGAVEDLLNLLDKMLAKEGFS---SAY 617
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
N ++E C L A L ++ + + +T +IL+ F G + + M +
Sbjct: 618 NQVIEKLCAFGKLSEANNLLSKVLRTASKRDAQTCHILMDSFLNRGLPLQSYNVACRMFQ 677
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAF 525
+ + PD LCQ+ + Q A
Sbjct: 678 RNLIPDLK--------LCQKVDSQLAL 696
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 156/373 (41%), Gaps = 5/373 (1%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
++++ L + + + + + MS G+ + + + I ++ + LS L E +
Sbjct: 271 TVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGK 330
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+ A +H FC R+ EA +++ E+ + C+PD + Y V + F +G +
Sbjct: 331 RFRVDEVGYSAT--VHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELD 388
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
+ ++K K G P T + + GL + EA EL +T + ++
Sbjct: 389 QARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVM 448
Query: 339 -GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
G + + M++KG PT ++ L LC K + + + + F
Sbjct: 449 HGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCF 508
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
++ ++ ++ G L A ++ +M PDV Y +++A R+ ++ A L
Sbjct: 509 INVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSL 568
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
++M G TY +I ++ E G +E L L ML K ++ Y ++E LC
Sbjct: 569 VEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAK--EGFSSAYNQVIEKLCA 626
Query: 518 ETNLQAAFEVFNK 530
L A + +K
Sbjct: 627 FGKLSEANNLLSK 639
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 68/152 (44%)
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
E ++ M+ L + A V++ M R+G+ + LM + R LR A ++
Sbjct: 127 EVFDEMLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAMRVLQL 186
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M GC+ ++ N+ ++ G I+ AL M GV PD TY L++GLC
Sbjct: 187 MQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARR 246
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ A E+ + + + + + T M LC+
Sbjct: 247 IVDALEMISSMLQNGCLPDKISYFTVMSFLCK 278
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 173/392 (44%), Gaps = 5/392 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ G ++ A F M GV + + F F+ FC+ + + + + ++R
Sbjct: 262 NALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRV 321
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP-DFIAYRIVAEEFKLMGS 276
R M +I G CK R+++A +LDE+ +R+ P + + Y ++ +
Sbjct: 322 R--GMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM-VRQGVPLNVVTYTVLVDGLCKERK 378
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
V E E VL+ K GV Y I G + + +A L + + +D + A
Sbjct: 379 VAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGA 438
Query: 337 LIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI + ++ A M E G P + + K K E + + + + +
Sbjct: 439 LIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSG 498
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ ++ +Y ++ LC +G + EA +M+ GLDP+V Y +L++ C+ L A
Sbjct: 499 FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAV 558
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L+++M G S + Y L+ + + G + A L M++ G+ D YT + G
Sbjct: 559 QLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGF 618
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
C + A EVF++ + H + R++ + +
Sbjct: 619 CNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 196/435 (45%), Gaps = 11/435 (2%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEIC--NSLLAVLASDGYIDNALKMF 177
+ +I L + +A S+F+ +K ++G P++ NSL+ G +D ++
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMK----EMGCLPDVVTFNSLIDGYGKCGELDEVEQLV 246
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFC 237
+EM G + + + I FC+ ++ + KRE M N + + FC
Sbjct: 247 EEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAM-KREGVMANVVTFSTFV-DAFC 304
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K V EA K+ ++R+R + Y + + G + + V+L + + GV
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFM 356
Y + GL ER++ EA+++ ++ ++ + LI G + + A+ + M
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
KG +S L + LC +K DE + + + + Y M+ SG++
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
EA ++Q++ G P+V Y +L++ C+ + A +++M G N++ Y L
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+ + G + A++LF+ M+ KG++ D YT+LL+G ++ NL AF + K ++ +
Sbjct: 545 VDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 604
Query: 537 MLARSILSTFMISLC 551
L + F+ C
Sbjct: 605 QLDLFCYTCFISGFC 619
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 164/375 (43%), Gaps = 7/375 (1%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN +L LA D ++F+++ V F + I C+ +L + S+ R
Sbjct: 160 CNHILLRLARDRSGRLVRRLFEQLPAPNV----FTFNIVIDFLCKEGELAEARSLFS--R 213
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+E + V +I G+ K ++E ++++E+R CK D + Y + F G
Sbjct: 214 MKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGR 273
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ ++ GV + F+ E + EA +L + +++
Sbjct: 274 METAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTC 333
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G+ + AIV + M+ +G + T + L LCK K E +V +++
Sbjct: 334 LIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAG 393
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ Y ++ + +A G++ EMK KGL+ D+S Y +L++ C L AK
Sbjct: 394 VRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAK 453
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L +M SG N Y ++ + G++ A+ + +L+ G P+ TY +L++GL
Sbjct: 454 SLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGL 513
Query: 516 CQETNLQAAFEVFNK 530
C+ ++ A FNK
Sbjct: 514 CKAGSIDEAISHFNK 528
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 194/448 (43%), Gaps = 11/448 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++++S++ +++ ++ ++++++ + D Y +I + + A+ F
Sbjct: 224 VTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAA 283
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+K ++ + +G + A+K+F +M RG+ + + I C+ +
Sbjct: 284 MKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGR 343
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + +LDE+ R+ +N V +++ G CK ++V EA VL + + + + Y
Sbjct: 344 LDDAIVLLDEM-VRQGVPLN-VVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLY 401
Query: 265 RIVAEEFKLMGSVFEREV-VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL----G 319
+ M E+ + +L + + G+ + Y I GL ++ EAK L
Sbjct: 402 TTLIHG-HFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD 460
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
E + + I +++A S + AI +++ G P + T L LCK
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPE---AIAMLQKILDSGFQPNVITYCALIDGLCKAG 517
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
DE + + + ++++Y +V LC +G L EA + EM KG+ D Y
Sbjct: 518 SIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYT 577
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+L++ ++ L A L +M SG +L Y IS F + + A +F M+
Sbjct: 578 ALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGH 637
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEV 527
G+APD Y L+ + NL+ A +
Sbjct: 638 GIAPDRAVYNCLISKYQKLGNLEEAISL 665
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 122/241 (50%), Gaps = 3/241 (1%)
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR 347
R+L V P T +L L +R + L E + + + V++ L + R
Sbjct: 149 RELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEAR 208
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
S F+ M E G +P + T ++L K + DE+ ++ + + + D+ +YN ++
Sbjct: 209 S---LFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALI 265
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+ C GR+ AYG MKR+G+ +V +++ ++A C+E L+R A KL+ QM G +
Sbjct: 266 NCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMA 325
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N TY LI + G ++ A+ L M+ +GV + TYT L++GLC+E + A +V
Sbjct: 326 LNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDV 385
Query: 528 F 528
Sbjct: 386 L 386
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 172/393 (43%), Gaps = 18/393 (4%)
Query: 110 VKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGY 169
V N +T + V F L++ +A +F +++ + L+ G
Sbjct: 289 VMANVVTFSTFVDAFCKEGLVR-----EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGR 343
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ---VLSMLDEVRKRENSMINGS 226
+D+A+ + DEM +GV + + + V + C+ K+ + VL M+++ R N ++ +
Sbjct: 344 LDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTT 403
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
+IHG K E+A +L E++ + + D Y + + + + E + +L K
Sbjct: 404 -----LIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTK 458
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SS 343
+ G+ P Y + ++ EA + + I+ F + ALI + S
Sbjct: 459 MDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGS 518
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
ID AI FN M + G P + + L LCK +E V+++ + D Y
Sbjct: 519 ID--EAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVY 576
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
++ G L +A+ + +M GL D+ Y + C +++ A++++ +M
Sbjct: 577 TALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIG 636
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
G + + YN LISK+ ++G +E A+ L M
Sbjct: 637 HGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 40/211 (18%)
Query: 378 RNKSDELVE-VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
R++S LV +++ L A + FT +N+++ FLC G L EA + MK G PDV
Sbjct: 169 RDRSGRLVRRLFEQLPAPNVFT----FNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVV 224
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA------- 489
+NSL++ + L ++L ++M SGC ++ TYN LI+ F + G +E A
Sbjct: 225 TFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAM 284
Query: 490 ----------------------------LRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
++LF M +G+A + TYT L++G C+ L
Sbjct: 285 KREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRL 344
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A + ++ V V L + + LC+
Sbjct: 345 DDAIVLLDEMVRQGVPLNVVTYTVLVDGLCK 375
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P+V +N +++ C+E L A+ L+ +M GC ++ T+N LI + + GE++ +L
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M G D TY +L+ C+ ++ A+ F VM STF+ + C+
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305
Query: 553 RVLI 556
L+
Sbjct: 306 EGLV 309
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 173/392 (44%), Gaps = 5/392 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ G ++ A F M GV + + F F+ FC+ + + + + ++R
Sbjct: 262 NALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRV 321
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP-DFIAYRIVAEEFKLMGS 276
R M +I G CK R+++A +LDE+ +R+ P + + Y ++ +
Sbjct: 322 R--GMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM-VRQGVPLNVVTYTVLVDGLCKERK 378
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
V E E VL+ K GV Y I G + + +A L + + +D + A
Sbjct: 379 VAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGA 438
Query: 337 LIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI + ++ A M E G P + + K K E + + + + +
Sbjct: 439 LIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSG 498
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ ++ +Y ++ LC +G + EA +M+ GLDP+V Y +L++ C+ L A
Sbjct: 499 FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAV 558
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L+++M G S + Y L+ + + G + A L M++ G+ D YT + G
Sbjct: 559 QLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGF 618
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
C + A EVF++ + H + R++ + +
Sbjct: 619 CNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 196/435 (45%), Gaps = 11/435 (2%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEIC--NSLLAVLASDGYIDNALKMF 177
+ +I L + +A S+F+ +K ++G P++ NSL+ G +D ++
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMK----EMGCLPDVVTFNSLIDGYGKCGELDEVEQLV 246
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFC 237
+EM G + + + I FC+ ++ + KRE M N + + FC
Sbjct: 247 EEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAM-KREGVMANVVTFSTFV-DAFC 304
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K V EA K+ ++R+R + Y + + G + + V+L + + GV
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFM 356
Y + GL ER++ EA+++ ++ ++ + LI G + + A+ + M
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
KG +S L + LC +K DE + + + + Y M+ SG++
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
EA ++Q++ G P+V Y +L++ C+ + A +++M G N++ Y L
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+ + G + A++LF+ M+ KG++ D YT+LL+G ++ NL AF + K ++ +
Sbjct: 545 VDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 604
Query: 537 MLARSILSTFMISLC 551
L + F+ C
Sbjct: 605 QLDLFCYTCFISGFC 619
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 164/375 (43%), Gaps = 7/375 (1%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN +L LA D ++F+++ V F + I C+ +L + S+ R
Sbjct: 160 CNHILLRLARDRSGRLVRRLFEQLPAPNV----FTFNIVIDFLCKEGELAEARSLFS--R 213
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+E + V +I G+ K ++E ++++E+R CK D + Y + F G
Sbjct: 214 MKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGR 273
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ ++ GV + F+ E + EA +L + +++
Sbjct: 274 METAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTC 333
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G+ + AIV + M+ +G + T + L LCK K E +V +++
Sbjct: 334 LIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAG 393
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ Y ++ + +A G++ EMK KGL+ D+S Y +L++ C L AK
Sbjct: 394 VRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAK 453
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L +M SG N Y ++ + G++ A+ + +L+ G P+ TY +L++GL
Sbjct: 454 SLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGL 513
Query: 516 CQETNLQAAFEVFNK 530
C+ ++ A FNK
Sbjct: 514 CKAGSIDEAISHFNK 528
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 194/448 (43%), Gaps = 11/448 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++++S++ +++ ++ ++++++ + D Y +I + + A+ F
Sbjct: 224 VTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAA 283
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+K ++ + +G + A+K+F +M RG+ + + I C+ +
Sbjct: 284 MKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGR 343
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + +LDE+ R+ +N V +++ G CK ++V EA VL + + + + Y
Sbjct: 344 LDDAIVLLDEM-VRQGVPLN-VVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLY 401
Query: 265 RIVAEEFKLMGSVFEREV-VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL----G 319
+ M E+ + +L + + G+ + Y I GL ++ EAK L
Sbjct: 402 TTLIHG-HFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD 460
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
E + + I +++A S + AI +++ G P + T L LCK
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPE---AIAMLQKILDSGFQPNVITYCALIDGLCKAG 517
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
DE + + + ++++Y +V LC +G L EA + EM KG+ D Y
Sbjct: 518 SIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYT 577
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+L++ ++ L A L +M SG +L Y IS F + + A +F M+
Sbjct: 578 ALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGH 637
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEV 527
G+APD Y L+ + NL+ A +
Sbjct: 638 GIAPDRAVYNCLISKYQKLGNLEEAISL 665
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 179/411 (43%), Gaps = 20/411 (4%)
Query: 110 VKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGY 169
V N +T + V F L++ +A +F +++ + L+ G
Sbjct: 289 VMANVVTFSTFVDAFCKEGLVR-----EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGR 343
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ---VLSMLDEVRKRENSMINGS 226
+D+A+ + DEM +GV + + + V + C+ K+ + VL M+++ R N ++ +
Sbjct: 344 LDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTT 403
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
+IHG K E+A +L E++ + + D Y + + + + E + +L K
Sbjct: 404 -----LIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTK 458
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SS 343
+ G+ P Y + ++ EA + + I+ F + ALI + S
Sbjct: 459 MDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGS 518
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
ID AI FN M + G P + + L LCK +E V+++ + D Y
Sbjct: 519 ID--EAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVY 576
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
++ G L +A+ + +M GL D+ Y + C +++ A++++ +M
Sbjct: 577 TALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIG 636
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
G + + YN LISK+ ++G +E A+ L M + V P T + +G
Sbjct: 637 HGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM--ERVLPSCTDSDTATDG 685
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 122/241 (50%), Gaps = 3/241 (1%)
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR 347
R+L V P T +L L +R + L E + + + V++ L + R
Sbjct: 149 RELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEAR 208
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
S F+ M E G +P + T ++L K + DE+ ++ + + + D+ +YN ++
Sbjct: 209 S---LFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALI 265
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+ C GR+ AYG MKR+G+ +V +++ ++A C+E L+R A KL+ QM G +
Sbjct: 266 NCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMA 325
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N TY LI + G ++ A+ L M+ +GV + TYT L++GLC+E + A +V
Sbjct: 326 LNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDV 385
Query: 528 F 528
Sbjct: 386 L 386
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 40/211 (18%)
Query: 378 RNKSDELVE-VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
R++S LV +++ L A + FT +N+++ FLC G L EA + MK G PDV
Sbjct: 169 RDRSGRLVRRLFEQLPAPNVFT----FNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVV 224
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA------- 489
+NSL++ + L ++L ++M SGC ++ TYN LI+ F + G +E A
Sbjct: 225 TFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAM 284
Query: 490 ----------------------------LRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
++LF M +G+A + TYT L++G C+ L
Sbjct: 285 KREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRL 344
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A + ++ V V L + + LC+
Sbjct: 345 DDAIVLLDEMVRQGVPLNVVTYTVLVDGLCK 375
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P+V +N +++ C+E L A+ L+ +M GC ++ T+N LI + + GE++ +L
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M G D TY +L+ C+ ++ A+ F VM STF+ + C+
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305
Query: 553 RVLI 556
L+
Sbjct: 306 EGLV 309
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/523 (20%), Positives = 210/523 (40%), Gaps = 50/523 (9%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
+AL F WA P F H Y +L ++ + + V++ + +N
Sbjct: 116 VALSFLYWAIGFPKFRHFMRLYIVSATALIGNKNLERANEVMQCMVMN------------ 163
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
+ ++A ++ E++ + N +L V G ++ A MF EM RGV
Sbjct: 164 ---FAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGV 220
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-------------- 231
+ F + + C ++ + L+ + +R + N + ++
Sbjct: 221 SPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVG 280
Query: 232 -------------------IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
+I+G CK +++AF++L+E+ R KP+ + + +
Sbjct: 281 YFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLC 340
Query: 273 LMGSVFER-EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
G + + LK R G P + Y I G E ++ A+ L + +
Sbjct: 341 KKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNT 400
Query: 332 DVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
+ LI G + A + M ++G P + T + + LCK+ DE +
Sbjct: 401 NTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNK 460
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+S + D +Y +++S C + +M + G PD+ Y +L+ CR+
Sbjct: 461 VSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQ 520
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
++ +++L+++ + G KTY +I + G A++LF M G APD+ TY +
Sbjct: 521 MKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGA 580
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
L+ GLC+E+ L A +++ ++ + T C++
Sbjct: 581 LISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKK 623
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 163/378 (43%), Gaps = 8/378 (2%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
C ++ GY++ + F +M G+ + I F I C+ + Q +L+E+
Sbjct: 262 CTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMV 321
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RIRECKPDFIAYRIVAEEFKLMG 275
+R +I G CK E+AF++ +L R KP+ Y + +
Sbjct: 322 RR--GWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKED 379
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ E++L + ++ G+ P TN Y I G A EL +++ F+ + N
Sbjct: 380 KLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYN 439
Query: 336 ALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
A+I + S+D A N + G T + L C++ ++ + + +
Sbjct: 440 AIIDGLCKKGSLD--EAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKML 497
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ D+ SY ++S C +++E+ + +E GL P Y S++ CR
Sbjct: 498 KVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTS 557
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A KL+ +M GC+ + TY LIS + +++ A L+ M++KG++P T +L
Sbjct: 558 LAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLA 617
Query: 513 EGLCQETNLQAAFEVFNK 530
C++ + A V ++
Sbjct: 618 YEYCKKDDSSTAINVLDR 635
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 181/429 (42%), Gaps = 39/429 (9%)
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
+++K L L ++ S+L + D Y II L + T+ A +F ++K
Sbjct: 145 TLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMK-- 202
Query: 149 CEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
+ P + N+++ L G +D A + EM G+E + I FC +
Sbjct: 203 KIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQ 262
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ +LDE+ R + +LI G CK RV EA+ V+ + R KPD ++Y
Sbjct: 263 AAVKLLDEMVVRGKVYPDVYTFNILI-DGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNA 321
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ + L GSV E + V K + P Y I G C+ + + E
Sbjct: 322 LMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGY------CKVRMVDE------ 369
Query: 327 FTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
A+V M K VP T + L L K +S +
Sbjct: 370 ----------------------AMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWD 407
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
+ + + A+ D+ +YNV++ + +A + Q + G+ P++ YN L++ C
Sbjct: 408 LVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLC 467
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ L+ AK+++ + A GC N++TYNI+I + G ++ A L + M+ P+
Sbjct: 468 KSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYI 527
Query: 507 TYTSLLEGL 515
T+ +++ +
Sbjct: 528 TFDTIVRAI 536
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/487 (22%), Positives = 198/487 (40%), Gaps = 71/487 (14%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF--IIPSLIQGKNTQKAFSVFNE 144
++ +L +L ++ NA+ S L + +K T+ S+ F +I + Q AFS+
Sbjct: 72 FNKLLSTLIKLKRYNAVVS-LYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGN 130
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ I I +L+ L G + A+ + E RG F + +G I C+ K
Sbjct: 131 ILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGK 190
Query: 205 LGQVLSMLDEVRK--------RENSMINGSVIAVLI------------------------ 232
+ M +++K N++I+G L+
Sbjct: 191 TRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNS 250
Query: 233 -IHGFCKGKRVEEAFKVLDELRIR-ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
IHGFC R + A K+LDE+ +R + PD + I+ + +G V E V+ K
Sbjct: 251 MIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKR 310
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
G P Y + G + + EAK++
Sbjct: 311 GWKPDIVSYNALMNGYCLSGSVGEAKQV-------------------------------- 338
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
F+ M+E+ +P + + L CK DE + + + + D +YN ++ L
Sbjct: 339 --FDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGL 396
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
SGR + +++ M+ G D+ YN L++ + + A L+ + G S N+
Sbjct: 397 SKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNI 456
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+TYNIL+ + G ++ A +F + KG P+ TY ++ GLC+E L A + K
Sbjct: 457 RTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYK 516
Query: 531 SVNHDVM 537
VN++ +
Sbjct: 517 MVNNNYL 523
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/532 (21%), Positives = 222/532 (41%), Gaps = 46/532 (8%)
Query: 66 LALGFFNWASQ-QPNFTHSPLSYHSILKSLSLSRQI-NAIDSVLKQVKVNKITLDSSVYR 123
L LGF + + F +++ +LK L ++ +A+D VL+++ + Y
Sbjct: 107 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYN 166
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMS 181
++ L +Q+A + + + D P++ + +++ +G +D A + EM
Sbjct: 167 ILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML 226
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
RG+ + + + I C+ + + + +L + K N ++ I+HG+C +
Sbjct: 227 DRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVK--NGVMPNCRTYNSIVHGYCSSGQ 284
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+EA L ++ +PD + Y + + G E + K G+ P Y
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS---IDPRSAIVFFNFMIE 358
+ G + + E L +++V + V + LI + + +D A++ F+ M +
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD--QAMLVFSKMRQ 402
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
+G P T + LCK + ++ + ++ + YN ++ LC + +
Sbjct: 403 QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL-------- 470
A +I EM +G+ D F+NS++++ C+E + ++KL+D M G N+
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLID 522
Query: 471 ---------------------------KTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
TYN LI+ + ++ +E AL LF M GV+P
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
D TY +L+GL Q AA E++ L S + + LC+ L
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 192/435 (44%), Gaps = 9/435 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+SI+ +L ++ ++ VL + N + + Y I+ ++A
Sbjct: 235 VTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK- 293
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
K + + + P++ NSL+ L +G A KMFD M+ RG++ +G + +
Sbjct: 294 -KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L ++ +LD + R N V ++LI + K +V++A V ++R + PD +
Sbjct: 353 GALVEMHGLLD-LMVRNGIHPNHYVFSILIC-AYAKQGKVDQAMLVFSKMRQQGLNPDTV 410
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y V G V + ++ ++P Y I L + + +AKEL +
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ +D N++I S + R + F+ M+ G P + T S L C K
Sbjct: 471 LDRGICLDTIFFNSIIDSHCK-EGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGK 529
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
DE ++ + + D +YN +++ C R+ +A + +EM+ G+ PD+ YN
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+++ + AK+L+ + SG L TYNI++ + + ALR+F N+
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649
Query: 501 VAPDATTYTSLLEGL 515
+ + T+ ++ L
Sbjct: 650 LQLETRTFNIMIGAL 664
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 180/423 (42%), Gaps = 48/423 (11%)
Query: 138 AFSVFNEV-KFNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
A S +N + + +++ P +C L+ G +D + +G I F
Sbjct: 72 AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV----LIIHGFCKGKRVEEAFKVLD 250
+ C + + + D V +R + G + V +++ G C R +EA ++L
Sbjct: 132 LLKGLCADKRTSDAM---DIVLRRMTQL--GCIPNVFSYNILLKGLCDENRSQEALELLQ 186
Query: 251 EL--RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
+ +C PD ++Y V F G + + + G+ P Y I L
Sbjct: 187 MMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAAL-- 244
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTL 368
C+A+ + + + +VL + M++ G +P T
Sbjct: 245 ----CKAQAMDKAM---------EVLTS-------------------MVKNGVMPNCRTY 272
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+++ C + E + K + ++ D+ +YN ++ +LC +GR EA + M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
+GL P+++ Y +L++ + L L D M +G N ++ILI +++ G+++
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI 548
A+ +F M ++G+ PD TY +++ LC+ ++ A F + ++ + + ++ +
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 549 SLC 551
SLC
Sbjct: 453 SLC 455
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 189/435 (43%), Gaps = 15/435 (3%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++L+ + + + +L + N I + V+ +I + + +A VF+++
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ + + P+ +++ +L G +++A++ F++M + I + I C
Sbjct: 401 RQ--QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458
Query: 204 KLGQ----VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
K + +L MLD + N II CK RV E+ K+ D + KP
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNS------IIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
+ I Y + + + L G + E +L +G+ P Y I G R+ +A L
Sbjct: 513 NIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLF 572
Query: 320 EVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ S + D N ++ G + +A + + E G LST + + LCK
Sbjct: 573 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKN 632
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
N +DE + +++ L D + ++N+M+ L GR EA + + GL PDV Y
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTY 692
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
+ + E + LL L+ M +GC+ N + N ++ K + G+I A + E
Sbjct: 693 SLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDE 752
Query: 499 KGVAPDATTYTSLLE 513
K + +A+T + L+
Sbjct: 753 KHFSLEASTASLFLD 767
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 97/206 (47%), Gaps = 7/206 (3%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS---ANDYFTDMESYNVMVSF 409
F+ ++ +GR ++ L N + R+ V Y ++ A++ ++ +Y +++
Sbjct: 42 FDELLRRGRGASIYGL-NCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGS 100
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL-WDQMFASGCSG 468
C +GRL + + + +KG D + L++ C + A + +M GC
Sbjct: 101 CCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIP 160
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKG--VAPDATTYTSLLEGLCQETNLQAAFE 526
N+ +YNIL+ + + AL L M + G PD +YT+++ G +E +L A+
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+++ ++ ++ ++ + +LC+
Sbjct: 221 TYHEMLDRGILPNVVTYNSIIAALCK 246
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/469 (23%), Positives = 200/469 (42%), Gaps = 42/469 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++ + A D K+ K TL++ +Y II + Q N +A ++ E
Sbjct: 360 VTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVRE 419
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ D +I ++++ G + L +FD + G S I +G I + + K
Sbjct: 420 MEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGK 479
Query: 205 LGQVL--SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+ + L S + EV +++M S ++I+GF + K AF V +++ KPD +
Sbjct: 480 VSKALEVSKMMEVAGIKHNMKTYS----MLINGFVRLKDWANAFAVFEDVVKDGLKPDVV 535
Query: 263 AYRIVAEEFKLMGSV----------------------------FEREVVLKKK------- 287
Y + F MG++ F R +++
Sbjct: 536 LYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMM 595
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKE-LGEVIVSGKFTIDDDVLNALIGSVSSIDP 346
R G P + + ILGL+ + ++ +A E L E+ ++G + + G S D
Sbjct: 596 RWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDT 655
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A +F + +G + T L K CK + + V + +S+ + YN++
Sbjct: 656 GKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNIL 715
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ G + EA ++Q+MK++G+ PD+ Y S + ACC+ ++ A K +M G
Sbjct: 716 IDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGV 775
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
N+KTY LI ++ E AL+ F M G+ PD Y L+ L
Sbjct: 776 KPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSL 824
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/406 (19%), Positives = 161/406 (39%), Gaps = 48/406 (11%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
FT S +SY ++ +++ V K ++V I + Y +I ++ K+ A
Sbjct: 459 GFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANA 518
Query: 139 FSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
F+VF +V + + P++ N+++ G +D A++ EM +T F I
Sbjct: 519 FAVFEDVVKD--GLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPII 576
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV----LIIHGFCKGKRVEEAFKVLDEL 252
F + + + L + D +R +G + V +I G + ++E+A ++LDE+
Sbjct: 577 HGFARSGDMRRALEIFDMMR------WSGCIPTVHTFNALILGLVEKCQMEKAVEILDEM 630
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
+ P+ Y + + +G + K + G+ Y + R+
Sbjct: 631 SLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRM 690
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
A + + S K PR+ V +N +I+
Sbjct: 691 QSALAVTREMSSQKI------------------PRNTFV-YNILID-------------- 717
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
+R E E+ + + D+ +Y ++ C +G ++ A IQEM+ G+
Sbjct: 718 -GWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVK 776
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
P++ Y +L+ R L A K + +M ++G + Y+ L++
Sbjct: 777 PNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMT 822
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%)
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+ + +MV++ G + A G + M+ +G++P Y SL+ A + A +
Sbjct: 290 KEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRK 349
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M G +L TY+IL+ F+++ + E A F E+ +A Y +++ CQ N
Sbjct: 350 MKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACN 409
Query: 521 LQAA 524
+ A
Sbjct: 410 MTQA 413
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 70/180 (38%), Gaps = 14/180 (7%)
Query: 109 QVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDG 168
++K + LD Y ++ + + Q A +V E+ + N L+ A G
Sbjct: 664 KLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRG 723
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV- 227
+ A ++ +M GV+ + FI C K G + +++ E + ++
Sbjct: 724 DVWEAAELMQQMKQEGVQPDIHTYTSFINACC---KAGDMQRATKTIQEMEVVGVKPNIK 780
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI----------VAEEFKLMGSV 277
+IHG+ + E+A K E++ KPD Y VAEE+ G V
Sbjct: 781 TYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEEYIYSGVV 840
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 193/433 (44%), Gaps = 13/433 (3%)
Query: 103 IDSVLK---QVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--C 157
+DS L+ ++ N I ++ Y II + N KA+ ++N++K +DI P +
Sbjct: 345 LDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKN--KDISPTVFNV 402
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NSL+ + A K+FDE G+ + W C+ K+ + S+ +++ +
Sbjct: 403 NSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSW-LCKEGKMSEACSIWEKMVR 461
Query: 218 RENSMINGSVIAVL-IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+ + SV++ +I G C+ ++ A V E+ + KP+ I Y ++ + + G
Sbjct: 462 KG---VRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGD 518
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ + R +AP I GL R E+++ + +V F N
Sbjct: 519 TEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNC 578
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
+I G V SA+ + M + G P + T +NL CK N D ++V +
Sbjct: 579 IIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKG 638
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D+ Y ++ C G + A ++ E++ GL P+ Y+S++ + + A
Sbjct: 639 IELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAAL 698
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L +M G +L+ Y LIS + G++ A L+ ML KG+ PD TY+ L+ GL
Sbjct: 699 HLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGL 758
Query: 516 CQETNLQAAFEVF 528
C + L+ A ++
Sbjct: 759 CNKGQLENAQKIL 771
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/520 (19%), Positives = 212/520 (40%), Gaps = 47/520 (9%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
+S++ +F ++ +L S +++IN + I +V + L++
Sbjct: 144 SSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNN 203
Query: 134 NTQKAFSVFNE-----VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFS 188
++A V+N+ VK +C I I S+ +G ++ A F E ++GVE
Sbjct: 204 MIREARDVYNKMASKGVKGDCATISVMIRASM-----REGKLEEAEGWFREAKNKGVELD 258
Query: 189 TIGFGVFIWKFCENAKLGQVLSMLDEVRKR-----------------------ENSMING 225
+ + I C+ L +L E+R + E + G
Sbjct: 259 ARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKG 318
Query: 226 S----------VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
V+A ++ G+CK ++ A ++ D++ P+ + Y ++ E G
Sbjct: 319 EMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNG 378
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVL 334
++ + + + + ++P + I G + R EA +L E + G +
Sbjct: 379 NMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANV--FTY 436
Query: 335 NALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N+L+ + S A + M+ KG P++ + +N+ C++ D V+ +
Sbjct: 437 NSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLE 496
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
++ +Y+V++ G A+G+ M+ + + P N ++ C+
Sbjct: 497 KGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSE 556
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
++ ++ G TYN +I F + G + AL ++ M + GV+P+ TYT+L+
Sbjct: 557 SQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLIN 616
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
G C+ N+ A +V ++ N + L ++ + CR+
Sbjct: 617 GFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRK 656
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Query: 155 EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
+I +L++ L +G + A +++ EM +G+ I + V I C +L +L++
Sbjct: 714 QIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILED 773
Query: 215 VRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+ ++ M I +I G K ++EAF++ +E+ + PD Y I+
Sbjct: 774 MDRK--CMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKD 831
Query: 275 GSVF 278
G++F
Sbjct: 832 GNLF 835
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 156/370 (42%), Gaps = 47/370 (12%)
Query: 167 DGY-----IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE-- 219
DGY + + + EM +G+ + + +G + L ++ S+L E+R+R
Sbjct: 302 DGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLP 361
Query: 220 -NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
N I SVI L CK + +A VL ++ C PD I + + G V
Sbjct: 362 PNVQIYNSVIDAL-----CKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQ 416
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
E E +L++ + + P + Y I G V GEVIV+ ++
Sbjct: 417 EAERLLRETTRWELNPNLSSYTSLIHGFCVR---------GEVIVASNLLVE-------- 459
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
M+E+G P + T L L + E + V + ++A
Sbjct: 460 -----------------MMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLP 502
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D YNV++S LC L A +I+EM + + PD Y +L++ R + L A+K++
Sbjct: 503 DANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIF 562
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ M G ++ YN +I + + G + A+ M + G PD TYT+L+ G ++
Sbjct: 563 EFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQ 622
Query: 519 TNLQAAFEVF 528
N+ A +
Sbjct: 623 GNISGALSLL 632
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 143/338 (42%), Gaps = 16/338 (4%)
Query: 213 DEVRKRENSMINGSVIA-----VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
D+ RK + M+ A +++ G C VE+ K+++ C P+ + Y ++
Sbjct: 241 DDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL----IVERRICEAKELGEVIV 323
+ + G V ++L + G+ P Y + L +E+ E+ E +
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
I + V++AL S+ A+V M G P T S L LC+ + E
Sbjct: 361 PPNVQIYNSVIDALCKCRSA---SQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQE 417
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ + + + ++ SY ++ C G + A ++ EM +G PDV + +L+
Sbjct: 418 AERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIH 477
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+ A + ++M A + YN+LIS + + A L MLE+ V P
Sbjct: 478 GLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHP 537
Query: 504 DATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVM 537
D YT+L++G + +L A ++F K ++ DV+
Sbjct: 538 DKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVV 575
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 117/264 (44%), Gaps = 3/264 (1%)
Query: 296 TNDYREFIL--GLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVF 352
+DY ++ GL +E + + +L E + N LI G D I+
Sbjct: 257 ADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILL 316
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
M KG +PT+ T L L ++ +++ + + +++ YN ++ LC
Sbjct: 317 LGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCK 376
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
+A V+++M G DPD +++L+ C+E ++ A++L + + NL +
Sbjct: 377 CRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSS 436
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
Y LI F GE+ A L M+E+G PD T+ +L+ GL + A V K
Sbjct: 437 YTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMA 496
Query: 533 NHDVMLARSILSTFMISLCRRVLI 556
++ +I + + LC++ ++
Sbjct: 497 ARQLLPDANIYNVLISGLCKKKML 520
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 172/448 (38%), Gaps = 22/448 (4%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y+S++ +L R + VLKQ+ D+ + +I L Q Q+A + E
Sbjct: 367 YNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETT 426
Query: 147 FNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ P + + SL+ G + A + EM RG + FG I +
Sbjct: 427 R--WELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQ 484
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ + L + +++ R+ ++ + I ++I G CK K + A +++E+ + PD Y
Sbjct: 485 VSEALLVREKMAARQ--LLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVY 542
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + F S+ E + + + G+ P Y I G + EA E +
Sbjct: 543 TTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRK 602
Query: 325 GKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
D+ LIG + S A+ M+++ P + S+L CK +D
Sbjct: 603 VGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDA 662
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
++ + + F ++ +Y +++ L ++ A + M P+ +SL+
Sbjct: 663 AECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVT 722
Query: 444 ACCREDL------------LRPAKKLWD---QMFASGCSGNLKTYNILISKFSEVGEIEG 488
C L L D + C YN +I +
Sbjct: 723 GLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGE 782
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLC 516
AL L + M KG PD+ T+ SLL G C
Sbjct: 783 ALDLKNKMANKGYKPDSATFLSLLYGFC 810
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 84/447 (18%), Positives = 174/447 (38%), Gaps = 79/447 (17%)
Query: 56 INPYLLTHHSLALGFF---------NWASQQPNFTHSP--LSYHSILKSLSLSRQINAID 104
+NP L ++ SL GF N + H+P +++ +++ L ++ Q++
Sbjct: 430 LNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEAL 489
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLA 162
V +++ ++ D+++Y +I L + K A ++ E+ +++ P+ + +L+
Sbjct: 490 LVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLE--QNVHPDKYVYTTLID 547
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
+ +D A K+F+ M +G+ +G+ I +C+ + + + + +RK
Sbjct: 548 GFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKV--GR 605
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
I +I G+ K + A +L ++ R C+P+ +AY + + +G E
Sbjct: 606 IPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAEC 665
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+ G+ P Y I+ G D V+ A +
Sbjct: 666 LFGSMESQGLFPNVITY---------------------TILIGSLFKKDKVVRAAM---- 700
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
+F +M+ P TL +L LC S
Sbjct: 701 ---------YFEYMLLNQCSPNDYTLHSLVTGLCNSMAS--------------------- 730
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGL----DPDVSFYNSLMEACCREDLLRPAKKLW 458
++S C+S G + ++ R + DP S YN+++ + C ++L A L
Sbjct: 731 ---IISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLK 787
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGE 485
++M G + T+ L+ F VG+
Sbjct: 788 NKMANKGYKPDSATFLSLLYGFCSVGK 814
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/469 (23%), Positives = 200/469 (42%), Gaps = 42/469 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++ + A D K+ K TL++ +Y II + Q N +A ++ E
Sbjct: 339 VTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVRE 398
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ D +I ++++ G + L +FD + G S I +G I + + K
Sbjct: 399 MEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGK 458
Query: 205 LGQVL--SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+ + L S + EV +++M S ++I+GF + K AF V +++ KPD +
Sbjct: 459 VSKALEVSKMMEVAGIKHNMKTYS----MLINGFVRLKDWANAFAVFEDVVKDGLKPDVV 514
Query: 263 AYRIVAEEFKLMGSV----------------------------FEREVVLKKK------- 287
Y + F MG++ F R +++
Sbjct: 515 LYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMM 574
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKE-LGEVIVSGKFTIDDDVLNALIGSVSSIDP 346
R G P + + ILGL+ + ++ +A E L E+ ++G + + G S D
Sbjct: 575 RWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDT 634
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A +F + +G + T L K CK + + V + +S+ + YN++
Sbjct: 635 GKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNIL 694
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ G + EA ++Q+MK++G+ PD+ Y S + ACC+ ++ A K +M G
Sbjct: 695 IDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGV 754
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
N+KTY LI ++ E AL+ F M G+ PD Y L+ L
Sbjct: 755 KPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSL 803
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/405 (19%), Positives = 161/405 (39%), Gaps = 48/405 (11%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
FT S +SY ++ +++ V K ++V I + Y +I ++ K+ AF
Sbjct: 439 FTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAF 498
Query: 140 SVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
+VF +V + + P++ N+++ G +D A++ EM +T F I
Sbjct: 499 AVFEDVVK--DGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIH 556
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAV----LIIHGFCKGKRVEEAFKVLDELR 253
F + + + L + D +R +G + V +I G + ++E+A ++LDE+
Sbjct: 557 GFARSGDMRRALEIFDMMR------WSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMS 610
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+ P+ Y + + +G + K + G+ Y + R+
Sbjct: 611 LAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQ 670
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
A + + S K PR+ V +N +I+
Sbjct: 671 SALAVTREMSSQKI------------------PRNTFV-YNILID--------------- 696
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
+R E E+ + + D+ +Y ++ C +G ++ A IQEM+ G+ P
Sbjct: 697 GWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKP 756
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
++ Y +L+ R L A K + +M ++G + Y+ L++
Sbjct: 757 NIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMT 801
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%)
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+ + +MV++ G + A G + M+ +G++P Y SL+ A + A +
Sbjct: 269 KEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRK 328
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M G +L TY+IL+ F+++ + E A F E+ +A Y +++ CQ N
Sbjct: 329 MKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACN 388
Query: 521 LQAA 524
+ A
Sbjct: 389 MTQA 392
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 70/180 (38%), Gaps = 14/180 (7%)
Query: 109 QVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDG 168
++K + LD Y ++ + + Q A +V E+ + N L+ A G
Sbjct: 643 KLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRG 702
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV- 227
+ A ++ +M GV+ + FI C K G + +++ E + ++
Sbjct: 703 DVWEAAELMQQMKQEGVQPDIHTYTSFINACC---KAGDMQRATKTIQEMEVVGVKPNIK 759
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI----------VAEEFKLMGSV 277
+IHG+ + E+A K E++ KPD Y VAEE+ G V
Sbjct: 760 TYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEEYIYSGVV 819
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 152/318 (47%), Gaps = 12/318 (3%)
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRE--CKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+IA ++ GFC+ KR +EA +L R E C PD +Y I+ + G + + +L
Sbjct: 147 IIANHLLKGFCEAKRTDEALDILLH-RTPELGCVPDVFSYSILLKSLCDQGKSGQADDLL 205
Query: 285 KKKRKLGV--APRTNDYREFILGLIVERRICEA----KELGEVIVSGKFTIDDDVLNALI 338
+ + G +P Y I G E + +A KE+ + + F V++AL
Sbjct: 206 RMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALC 265
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
++D A F M+ KG +P T +NL + E V V+K + +
Sbjct: 266 -KARAMDKAEA--FLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILP 322
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D+ + ++++ LC G+++EA V M KG +P+V Y ++ + L L+
Sbjct: 323 DVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLF 382
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
D M G + ++ T+N+LI ++ G ++ A+ +F+ M + GV PD TY +++ LC+
Sbjct: 383 DLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI 442
Query: 519 TNLQAAFEVFNKSVNHDV 536
+ A E FN+ ++ V
Sbjct: 443 GKMDDAMEKFNQMIDQGV 460
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/480 (20%), Positives = 202/480 (42%), Gaps = 17/480 (3%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
LAL FF + + ++ H + R A+D +L + D Y +
Sbjct: 129 LALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSIL 188
Query: 126 IPSLI-QGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSH 182
+ SL QGK+ Q A + + P++ ++++ +G ++ A +F EM
Sbjct: 189 LKSLCDQGKSGQ-ADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQ 247
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-----IIHGFC 237
RG+ + + + C+ + + + L + M+N V+ +I+G+
Sbjct: 248 RGIPPDFVTYSSVVHALCKARAMDKAEAFLRQ-------MVNKGVLPNNWTYNNLIYGYS 300
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
+ +EA +V E+R PD + ++ G + E V G P
Sbjct: 301 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVF 360
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFM 356
Y + G + + + +L ++++ D N LI + ++ A++ FN M
Sbjct: 361 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM 420
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
+ G P + T + LC+ K D+ +E + + D +Y+ ++ CT G L
Sbjct: 421 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL 480
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
+A +I E+ G+ D+ F++S++ C+ + A+ ++D G Y++L
Sbjct: 481 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSML 540
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+ + VG++E ALR+F M+ G+ P+ Y +L+ G C+ + +F + + +
Sbjct: 541 MDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 600
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 201/461 (43%), Gaps = 25/461 (5%)
Query: 78 PNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS-VYRFIIPSLIQGKNTQ 136
P+F ++Y S++ +L +R ++ ++ L+Q+ VNK L ++ Y +I +
Sbjct: 252 PDF----VTYSSVVHALCKARAMDKAEAFLRQM-VNKGVLPNNWTYNNLIYGYSSTGQWK 306
Query: 137 KAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+A VF E++ + I P++ + L+ L G I A +FD M+ +G + + +
Sbjct: 307 EAVRVFKEMRRH--SILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTI 364
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV------LIIHGFCKGKRVEEAFKV 248
+ + L + + D ++ G IA ++I + +++A +
Sbjct: 365 MLNGYATKGCLVDMTDLFD--------LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMII 416
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
+E+R KPD + YR V +G + + + GVAP Y I G
Sbjct: 417 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCT 476
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLST 367
+ +AKEL I++ +D +++I ++ + A F+ + G PT
Sbjct: 477 HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVV 536
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
S L C K ++ + V+ + + + Y +V+ C GR+ E + +EM
Sbjct: 537 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREML 596
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
+KG+ P YN +++ PAK + +M SG + N TYNI++ + +
Sbjct: 597 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFD 656
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
A+ LF + V + T +++ G+ Q ++ A ++F
Sbjct: 657 EAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLF 697
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 93/439 (21%), Positives = 187/439 (42%), Gaps = 15/439 (3%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV--YRFIIPSLIQGKNTQKAFSVF 142
SY +LKSL + D +L+ + V Y +I + + KA +F
Sbjct: 183 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLF 242
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E+ I P+ +S++ L +D A +M ++GV + + I+ +
Sbjct: 243 KEMVQ--RGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYS 300
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + + + E+R+ +S++ V +++ CK +++EA V D + ++ P+
Sbjct: 301 STGQWKEAVRVFKEMRR--HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPN 358
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL----IVERRICEAK 316
+Y I+ + G + + + G+AP + I ++++ +
Sbjct: 359 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFN 418
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
E+ + V V+ AL + +D A+ FN MI++G P L + C
Sbjct: 419 EMRDHGVKPDVVTYRTVIAALC-RIGKMD--DAMEKFNQMIDQGVAPDKYAYHCLIQGFC 475
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+ E+ + N D+ ++ +++ LC GR+ +A + GL P
Sbjct: 476 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAV 535
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
Y+ LM+ C + A +++D M ++G N Y L++ + ++G I+ L LF M
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM 595
Query: 497 LEKGVAPDATTYTSLLEGL 515
L+KG+ P Y +++GL
Sbjct: 596 LQKGIKPSTILYNIIIDGL 614
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 115/569 (20%), Positives = 214/569 (37%), Gaps = 88/569 (15%)
Query: 28 RKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWAS---QQPNFTHSP 84
R+ TP+LE+ L+ + +PS A P +LA+ FN A+ Q P SP
Sbjct: 57 RRGTPVLERDLNGFLAALARAPSSAACRSGP------ALAVALFNRAASRAQGPRVL-SP 109
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
S+ Y ++ + + A + F +
Sbjct: 110 TSH---------------------------------TYAILMDCCTRAHRPELALAFFGQ 136
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTI----GFGVFIWKFC 200
+ + I N LL D AL D + HR E + + + + C
Sbjct: 137 LLRTGLRVNIIIANHLLKGFCEAKRTDEAL---DILLHRTPELGCVPDVFSYSILLKSLC 193
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ K GQ +L + ++ + V+A +I GF K V +A + E+ R P
Sbjct: 194 DQGKSGQADDLL-RMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPP 252
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
DF+ Y V ++ + E L++ GV P Y I G + EA +
Sbjct: 253 DFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVF 312
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ + D L+ L+GS+ + A F+ M KG+ P + + + + +
Sbjct: 313 KEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATK 372
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
++ +++ ++ + D+ ++NV++ G L +A + EM+ G+ PDV Y
Sbjct: 373 GCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 432
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS----------------- 481
+++ A CR + A + ++QM G + + Y+ LI F
Sbjct: 433 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMN 492
Query: 482 ------------------EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
++G + A +F + G+ P A Y+ L++G C ++
Sbjct: 493 NGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEK 552
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCR 552
A VF+ V+ + + T + C+
Sbjct: 553 ALRVFDAMVSAGIEPNDVVYGTLVNGYCK 581
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/452 (21%), Positives = 188/452 (41%), Gaps = 16/452 (3%)
Query: 75 SQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN 134
Q PN SY +L + + + + + + I D + +I +
Sbjct: 354 GQNPNV----FSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGM 409
Query: 135 TQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
KA +FNE++ + + P++ +++A L G +D+A++ F++M +GV +
Sbjct: 410 LDKAMIIFNEMRDH--GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
I FC + L + ++ E+ N M V II+ CK RV +A + D
Sbjct: 468 HCLIQGFCTHGSLLKAKELISEIMN--NGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLT 525
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
P + Y ++ + + L+G + + V G+ P Y + G RI
Sbjct: 526 VNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRI 585
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
E L ++ + N +I G + A V F+ M E G T + +
Sbjct: 586 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIV 645
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
+ L K DE + ++K L A + ++ + N M++ + + R+ EA + + R GL
Sbjct: 646 LRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 705
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
P V Y+ ++ +E L+ A+ ++ M +GC + + N ++ + + EI A
Sbjct: 706 VPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGA 765
Query: 492 LFHNMLEKGVAPDATTYTSLLE-----GLCQE 518
+ E+ + + T L++ G C+E
Sbjct: 766 YLSKIDERNFSLEHLTTMLLVDLFSSKGTCRE 797
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 169/400 (42%), Gaps = 37/400 (9%)
Query: 150 EDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
+ I P+I N L+ A+ G +D A+ +F+EM GV+ + + I C K+
Sbjct: 388 DGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM-- 445
Query: 208 VLSMLDEVRKRENSMINGSVIA-----VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
D+ ++ N MI+ V +I GFC + +A +++ E+ D +
Sbjct: 446 -----DDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 500
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
+ + +G V + + + +G+ P Y + G + ++ +A + + +
Sbjct: 501 FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAM 560
Query: 323 VSGKFTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
VS +D V L+ + ID + F M++KG P+ + L N+
Sbjct: 561 VSAGIEPNDVVYGTLVNGYCKIGRID--EGLSLFREMLQKGIKPS-TILYNII------- 610
Query: 380 KSDELVEVYKVLSANDYFTDME---------SYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
D L E + + A F +M +YN+++ L + EA + +E++
Sbjct: 611 -IDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMN 669
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+ ++ N+++ + + AK L+ + SG + TY+I+I+ + G +E A
Sbjct: 670 VKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAE 729
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+F +M G PD+ ++ L ++ + A +K
Sbjct: 730 DMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSK 769
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 173/395 (43%), Gaps = 47/395 (11%)
Query: 167 DGYID-----NALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
DGY+ NA +F++MS G+E + + + + FC++ ++ + + +L ++ R S
Sbjct: 344 DGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCS 403
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
+ I II GF K V A+K + E+++ C+P+ Y ++ +G +
Sbjct: 404 PTIQTYIT--IIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAA 461
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
V+ + GV P Y + G +GE+ ++ K + V
Sbjct: 462 SVIDEMELAGVQPNFRSYTTLMQGF---------ASIGEIGLAFK----------CLKRV 502
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ I + P + + ++L K CK + + V + ++ +
Sbjct: 503 NEITQK---------------PPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNY 547
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+N ++ G + EAYG++Q+M+++G PD+ Y S + ACC+ ++ A + ++M
Sbjct: 548 IFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATETIEEM 607
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY----TSLLE--GL 515
NL+TY ILI ++ V E AL + M G+ PD Y TSLL +
Sbjct: 608 KQQDLQPNLQTYTILIHGWTSVSHPEKALICYDEMKAAGLIPDKPLYYCIVTSLLSKAAI 667
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
+ET +V ++ V+ + + + + SL
Sbjct: 668 ARETVRNGVLQVTSEMVDQGMCIDLATAKQWQRSL 702
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/454 (21%), Positives = 184/454 (40%), Gaps = 53/454 (11%)
Query: 111 KVNKITLDSSVYRF--IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLAS 166
K+ +DSSV+ + +I + I +N Q A S E++ E I P +++++ S
Sbjct: 148 KMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEMEI--EGIFPNAATFSAIISGYGS 205
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
G ++ A K F R V EN N +
Sbjct: 206 SGNVEAAEKWF----QRSVS--------------------------------ENWNHNVA 229
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG------SVFER 280
+ + IIH +CK +E A ++ ++ + + Y I+ + + +VF +
Sbjct: 230 IYSS-IIHAYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHK 288
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-G 339
LK + G++P Y I ++ +A E + + + T++ + + L+ G
Sbjct: 289 ---LKARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDG 345
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
V D +A F M E G P T + L K CK + +++ +
Sbjct: 346 YVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPT 405
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+++Y ++ +G +R AY + EMK G P+ + YN +M + + A + D
Sbjct: 406 IQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVID 465
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M +G N ++Y L+ F+ +GEI A + + E P +Y SLL+ C+
Sbjct: 466 EMELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAG 525
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+Q A V + V + I +T + +R
Sbjct: 526 RMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQR 559
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 3/203 (1%)
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
D R A V F M G ++ +NL + V + + F + +++
Sbjct: 138 DKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEMEIEGIFPNAATFS 197
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
++S +SG + A Q + + +V+ Y+S++ A C+ + A+ L M
Sbjct: 198 AIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNMERAEALVADMEEQ 257
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNM---LEKGVAPDATTYTSLLEGLCQETNL 521
G L YNIL+ ++ L +FH + ++ G++P A TY L+ + +
Sbjct: 258 GLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTYGCLINLYTKLGKM 317
Query: 522 QAAFEVFNKSVNHDVMLARSILS 544
A E + + L R+ S
Sbjct: 318 MKALEFCKEMKAQGITLNRNTYS 340
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
R A+ +++M A+G ++ YN LI + ++GA+ M +G+ P+A T++++
Sbjct: 140 RGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEMEIEGIFPNAATFSAI 199
Query: 512 LEGLCQETNLQAAFEVFNKSV----NHDVMLARSILSTF 546
+ G N++AA + F +SV NH+V + SI+ +
Sbjct: 200 ISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAY 238
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 57/122 (46%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y +++ + G R A ++M+ G+D V YN+L+ A L+ A ++M
Sbjct: 126 YALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEME 185
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G N T++ +IS + G +E A + F + + + Y+S++ C+ N++
Sbjct: 186 IEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNME 245
Query: 523 AA 524
A
Sbjct: 246 RA 247
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 158/398 (39%), Gaps = 47/398 (11%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ---VLSMLDE 214
N L+ L + + A KM DEM+ +G + +G + C ++ + VLS
Sbjct: 173 NLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAPP 232
Query: 215 VRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
V N+ +I C+ R++E F V+ ++ R +P+ I Y + F
Sbjct: 233 VAASYNA----------VILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKA 282
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G + +L + G P + + GL + R+ +A ++
Sbjct: 283 GELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDM---------------- 326
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+ M+ +G P+ + + L + LC V + +
Sbjct: 327 ------------------WKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQH 368
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
F + +Y+ ++ +G L A + +M R G P+V Y +++ C++ + A
Sbjct: 369 GCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQA 428
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+ L D+M C N T+N LI + AL +FH M G P+ TY LL G
Sbjct: 429 ESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHG 488
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L +E N A ++ + NH + L+ +T + LC+
Sbjct: 489 LFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQ 526
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 165/407 (40%), Gaps = 50/407 (12%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--------PEICN--SLLAVLASDGYI 170
V R + P++I AF E++ C + P + +L+ L +DG +
Sbjct: 261 VGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRV 320
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
+AL M+ M G ST+ + V I C L S+L+++ ++ N +
Sbjct: 321 HDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDM-EQHGCFPNARTYST 379
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF--KLMGSVFEREVVLKKKR 288
LI GF K ++ A + +++ CKP+ + Y + F KLM + + E ++ K
Sbjct: 380 LI-DGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFN--QAESLIDKML 436
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS 348
P T + I R +C + +G
Sbjct: 437 VENCPPNTVTFNTLI------RSLCNCRRVGR---------------------------- 462
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F+ M G P T + L L + + +++ + + + +YN +VS
Sbjct: 463 ALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVS 522
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC REA + M +G+ PD + +++ A C+E +R A + M C
Sbjct: 523 GLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGR 582
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
N+ Y IL+++ ++E A+ ML +G+ P+ T+ L+ G+
Sbjct: 583 NILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGV 629
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 123/576 (21%), Positives = 228/576 (39%), Gaps = 146/576 (25%)
Query: 15 QAIISASNRTRPAR----KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGF 70
Q +IS S R +P+ W HQ G + P L RV++ + T +AL
Sbjct: 356 QDVISKSIREKPSNFSNYYWLS------HQFG-PVIVDPDLFVRVLSSFR-TSPRMALRL 407
Query: 71 FNWASQQPNFTHSPLSYHSILKSLS-----------LSRQINA-----IDSVLKQVKVNK 114
F WA QP F S + +IL+ L+ + R INA +D ++ ++
Sbjct: 408 FRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSE 467
Query: 115 IT---LDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGY 169
++ LD ++ + S+++ + SVF+ K + P++ CN +L +L
Sbjct: 468 VSVKILDLLIWVYSKKSMVE-----QCLSVFD--KMIKSRLSPDVKNCNRILRILRDKDL 520
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+ A++++ M G++ + + + ++LD
Sbjct: 521 MSKAVEVYRTMGEFGIKPTIVTYN----------------TLLD---------------- 548
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+CKG +V++ +L E++ R C P+ + Y ++ G + + ++ + K
Sbjct: 549 -----SYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLK 603
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSA 349
G+ Y I G + + EA L E
Sbjct: 604 TGLKVSAYTYNPLIYGYFNKGLLAEALSLQEE---------------------------- 635
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
M+ KG PT++T ++ LCK + + ++ + AN+ D+ SYN ++
Sbjct: 636 ------MVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYG 689
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
C G L +A+ + E++ L P + YN+L++ CR+ L A++L +M G + +
Sbjct: 690 YCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPD 749
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLE------------------------------- 498
+ TY IL++ ++G + A F ML
Sbjct: 750 IVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQE 809
Query: 499 ----KGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
KG PD Y +++GLC+ NL+ A E+ K
Sbjct: 810 EMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK 845
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ + M E G PT+ T + L + CK K + +++ + + +YNV+++
Sbjct: 524 AVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLIN 583
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L G +A G+I EM + GL YN L+ + LL A L ++M G S
Sbjct: 584 GLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASP 643
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ TYN I ++G + A++ +ML + PD +Y +L+ G C+ NL AF +F
Sbjct: 644 TVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLF 703
Query: 529 NKSVNHDVMLARSILSTFMISLCRR 553
++ + + +T + LCR+
Sbjct: 704 DELRSIYLFPTIVTYNTLLDGLCRQ 728
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 95/200 (47%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F+ MI+ P + + + + L ++ + VEVY+ + + +YN ++ C
Sbjct: 493 FDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCK 552
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G++++ ++ EM+R+G P+ YN L+ ++ AK L +M +G + T
Sbjct: 553 GGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYT 612
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YN LI + G + AL L M+ KG +P TY S + GLC+ + A + + +
Sbjct: 613 YNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDML 672
Query: 533 NHDVMLARSILSTFMISLCR 552
++++ +T + CR
Sbjct: 673 ANNLLPDVVSYNTLIYGYCR 692
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 85/176 (48%)
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K++ ++ + V+ + + D+++ N ++ L + +A V + M G+ P +
Sbjct: 482 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 541
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN+L+++ C+ ++ L +M GC+ N TYN+LI+ S+ GE E A L M
Sbjct: 542 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 601
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L+ G+ A TY L+ G + L A + + V + ++F+ LC+
Sbjct: 602 LKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCK 657
>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 638
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/519 (21%), Positives = 216/519 (41%), Gaps = 24/519 (4%)
Query: 4 RPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTH 63
+ +++A + + I R++P +W L D PS + ++ L +
Sbjct: 91 KDVSEIAAEVGKVI-----RSKP--RWEQSLLSDYPSFNFHD---PSFFSELLKQ--LNN 138
Query: 64 HSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
L+L FF W S QP F P+S + + +L ++ S L + + Y
Sbjct: 139 VFLSLRFFLWLSSQPEFLPHPVSCNKLFDALLEAKACVPAKSFLYSFEFSPEPASLENY- 197
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR 183
I + +G ++A F+ +K E N G D K+++ M
Sbjct: 198 --IRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMET 255
Query: 184 GVE----FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
GV+ T+G+ I FC + K+ + +L + E+ + + +I GFCK
Sbjct: 256 GVQKDVDIETVGY--LIQAFCNDNKVSRAYEILRQ--SLEDGLTPCNDAFNKLISGFCKE 311
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
K +++ + ++ PD Y+ + F + V + G AP Y
Sbjct: 312 KNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMY 371
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIE 358
I G ++ +A +L ++ F ++ N LI I + A+ + M++
Sbjct: 372 TTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLD 431
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
G T + + L LC ++DE + ++ + + D+ +YN ++ C G++ +
Sbjct: 432 SGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQ 491
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
+ +++E++ KGL P S Y L++ C+ ++ AK++W+ M G + T + +IS
Sbjct: 492 STDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIIS 551
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
E G + + ML+ + P T+ L++ L Q
Sbjct: 552 GLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQ 590
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%)
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
+E G P + L CK ++E+ + + D+ +Y +++ C +
Sbjct: 290 LEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMT 349
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
+A+ V +K +G PD+ Y +L+ C+ L A KLW +M G N +YN L
Sbjct: 350 LQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTL 409
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I F ++G ++ A++L+ ML+ G + +L+ GLC A++ F + ++
Sbjct: 410 IYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNI 469
Query: 537 MLARSILSTFMISLCR 552
+ +T + CR
Sbjct: 470 VCDVITYNTLIQGFCR 485
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 116/292 (39%), Gaps = 9/292 (3%)
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I C+G VEEA D L+ +P + + G +++ K +
Sbjct: 198 IRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRT---DLIWKLYEGMME 254
Query: 293 APRTNDYREFILGLIVE-----RRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDP 346
D +G +++ ++ A E+ + T +D N LI G +
Sbjct: 255 TGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNH 314
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+ + MI K R P + T + CK + + EV+ L Y DM Y +
Sbjct: 315 HRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTL 374
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ C G+L +A + EM KG P+ YN+L+ C+ L A KL+ +M SG
Sbjct: 375 IHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGY 434
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ N LI G + A F M K + D TY +L++G C+E
Sbjct: 435 KETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCRE 486
>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
Length = 726
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 135/553 (24%), Positives = 234/553 (42%), Gaps = 15/553 (2%)
Query: 8 DLATRISQAIISASNRTRPARK-WTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSL 66
DLA ++ + R R+ W+P LE L QL LR LSP V V+
Sbjct: 52 DLAEESRSRLVRDTCRLLELRESWSPKLEAQLRQL-LR-VLSPPQVRAVLRAQARGDVRR 109
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A FF WA +Q + H+P + +L LS +R + V++ + + + + ++
Sbjct: 110 AFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLM 169
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVE 186
S + + A V + ++ + ICN + VL G +D AL+ + M GVE
Sbjct: 170 LSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVE 229
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
+ I C ++ + M+ + +N + ++ CK KRVEE
Sbjct: 230 PDVYTYNCLIKGLCGARRVVDAMEMIGVML--QNGCPPDKISYYTVMSFLCKEKRVEEVR 287
Query: 247 KVLDELRIRECK-PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
+L +R PD + Y ++ G E L++ Y +
Sbjct: 288 GLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHS 347
Query: 306 LIVERRICEAKEL-GEVIVSGKFTIDDDVL--NALIGSVSSI-DPRSAIVFFNFMIEKGR 361
+ R+ EAKE+ GE+I G DV+ + ++ I + A M +
Sbjct: 348 FCLNGRMAEAKEIVGEMISKG---CQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDC 404
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME-SYNVMVSFLCTSGRLREAY 420
P T + L LCK K+ E E+ S +++T + +Y+V++ G+L+E+
Sbjct: 405 KPNTVTHTALLNGLCKVGKTSEAWELLNK-SEEEWWTPSDITYSVVMHGFRREGKLKESC 463
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
V+ +M +KG P N L+ A C++ AK +Q + GC+ N+ + +I F
Sbjct: 464 DVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGF 523
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
S G++E AL L +M PD TYT +++ L ++ L+ A + K +N V+
Sbjct: 524 SRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTP 583
Query: 541 SILSTFMISLCRR 553
T + C +
Sbjct: 584 VTYRTVIHRYCEK 596
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 102/469 (21%), Positives = 197/469 (42%), Gaps = 55/469 (11%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITL--DSSVYRFIIPSLIQGKNTQKAFSVF 142
+SY++++ L +++ + +L++++ N L D Y +I L + + +A
Sbjct: 268 ISYYTVMSFLCKEKRVEEVRGLLQRMR-NDAGLFPDQVTYNVLIHGLAKHGHADEALEFL 326
Query: 143 NEV---KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
E +F +++G ++++ +G + A ++ EM +G + + + + F
Sbjct: 327 RESEGKRFRVDEVG---YSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGF 383
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
C +L Q M+ + K N +V +++G CK + EA+++L++ P
Sbjct: 384 CRIGELDQARKMMKHMYK--NDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTP 441
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
I Y +V F+ G + E V+ + + G P T + I L +R+ EAK+
Sbjct: 442 SDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFM 501
Query: 320 EVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
E S TI+ +I S D SA+ + M R P + T + + L K+
Sbjct: 502 EQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKK 561
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
GRL+EA G++++M +G+ P Y
Sbjct: 562 -----------------------------------GRLKEATGLVEKMLNRGVLPTPVTY 586
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT-YNILISKFSEVGEIEGALRLFHNML 497
+++ C + L L ++M A +K+ YN ++ K G++ A L + +L
Sbjct: 587 RTVIHRYCEKGNLEDLLNLLEKMLARQ---EMKSAYNQVVEKLCAFGKLNEAYSLLYKIL 643
Query: 498 EKGVAPDATTYTSLLEG-LCQETNLQA---AFEVFNKSVNHDVMLARSI 542
DA T L+E L + LQA A +F +++ DV L + +
Sbjct: 644 RTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIPDVKLCQKV 692
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 184/407 (45%), Gaps = 23/407 (5%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N ++A L G +A+K+FDEM + V + I + I + L + ++ +
Sbjct: 192 NVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLR 251
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE------EF 271
+ + + +++ G C+ R+ E VLDE+ R+ PD Y I+ + +
Sbjct: 252 --HGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDS 309
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL--GLIVERRICEAKELGEVIVSGKFTI 329
+ M S+FE V KK K+G Y IL GL + +I +A+E+ + +V+
Sbjct: 310 QTMLSLFEESV--KKGVKIGA------YTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQ 361
Query: 330 DDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
+ N LI I D A F M + P T + L L K + E ++
Sbjct: 362 TTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLV 421
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+ N +E++N ++ +G+L + + ++ +M+ KGL P+V Y S++ A C+
Sbjct: 422 IEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKN 481
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
+ A + D MF + YN +I + E G + A L M GV P TY
Sbjct: 482 GKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTY 541
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILS--TFMISLCRR 553
L++GLC+++ + A E+ + N+ LA ++S T + + C R
Sbjct: 542 NLLIKGLCKQSQISEAEELLDSLRNYG--LAPDVISYNTLISACCYR 586
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/453 (22%), Positives = 188/453 (41%), Gaps = 22/453 (4%)
Query: 69 GFFNWASQ-----QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
GF W+ +PN ++Y+ +L L + ++ +VL ++ K+ D Y
Sbjct: 242 GFRLWSQMLRHGLKPNV----ITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYS 297
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR 183
+ + ++Q S+F E IG C+ LL L DG I A ++ + +
Sbjct: 298 ILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNS 357
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRV 242
G+ +T+ + I +C+ L S+ +++ R +I I +I+G K +R+
Sbjct: 358 GLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSR---LIRPDHITYNALINGLGKVERI 414
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
EA ++ E+ P + + + + G + + ++L ++ G+ P Y
Sbjct: 415 TEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSI 474
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGR 361
+ +I EA + + + V NA+I + + A + M G
Sbjct: 475 VNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGV 534
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P++ T + L K LCK+++ E E+ L D+ SYN ++S C A
Sbjct: 535 PPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALE 594
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG---CSGNLKTYNILIS 478
+ +EM + G+ P Y L + + + L+ QM CSG YNI++
Sbjct: 595 LEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSG---IYNIMVD 651
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
+++ GE L M +KG+A YTS+
Sbjct: 652 AYAKCGEESKVEALRKEMSDKGIA--VGDYTSM 682
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/457 (19%), Positives = 184/457 (40%), Gaps = 38/457 (8%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
Y +I L + A +F+E+ N+++ G +++ +++ +M
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE---------------------N 220
G++ + I + V + C ++G+ ++LDE+ R+
Sbjct: 251 RHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQ 310
Query: 221 SMIN------------GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVA 268
+M++ G+ ++++G CK ++ +A +VL L + Y +
Sbjct: 311 TMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLI 370
Query: 269 EEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFT 328
+ +G + + ++ + + P Y I GL RI EA +L VI K
Sbjct: 371 NGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDL--VIEMEKNG 428
Query: 329 IDDDV--LNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
++ V N LI + + + M EKG P + + ++ CK K E V
Sbjct: 429 VNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAV 488
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
+ + D + YN ++ G +A+ + ++MK G+ P + YN L++
Sbjct: 489 AILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGL 548
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C++ + A++L D + G + ++ +YN LIS + AL L M + G+ P
Sbjct: 549 CKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSP 608
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
TY L L + ++ + ++ DV+ I
Sbjct: 609 RTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGI 645
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
SYNV+++ L +G +A + EM K + P+ YN++++ ++ L +LW QM
Sbjct: 190 SYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQM 249
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G N+ TYN+L+S G + + M + + PD TY+ L +G + +
Sbjct: 250 LRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDS 309
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
Q +F +SV V + S + LC+
Sbjct: 310 QTMLSLFEESVKKGVKIGAYTCSILLNGLCK 340
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD-PDVSFYNSLMEAC 445
+++L A D ++N V +G L EA G+++ M G P+ YN ++
Sbjct: 139 AFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGL 198
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
+ A KL+D+M N TYN +I + G++E RL+ ML G+ P+
Sbjct: 199 WKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNV 258
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNK 530
TY LL GLC+ + V ++
Sbjct: 259 ITYNVLLSGLCRAGRMGETAAVLDE 283
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG----N 469
GR + G + + PD +N ++AC L A + +M GC G N
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRM---GCDGAPAPN 187
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+YN++I+ + G A++LF M EK V P+ TY ++++G ++ +L++ F +++
Sbjct: 188 AFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWS 247
Query: 530 KSVNHDVMLARSILSTFMISLCR 552
+ + H + + + LCR
Sbjct: 248 QMLRHGLKPNVITYNVLLSGLCR 270
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/507 (20%), Positives = 231/507 (45%), Gaps = 47/507 (9%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKV--NKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
+SY+++L +L RQ +D+ L ++V ++ + Y ++ +L + T +A +
Sbjct: 79 VSYNTVLAALC--RQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+++ + + P++ +L+ L +D A+++ EM G+E + + + + +C
Sbjct: 137 RDMQAS--GVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYC 194
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + V + +E+ R + V+ +I C+ +V++A +V+D++ R +P+
Sbjct: 195 KAGRWECVSKVFEEMSGR--GIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPN 252
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ Y ++ GSV E + + GVA Y I GL + EA L E
Sbjct: 253 VVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLE 312
Query: 321 VIVSGKFTIDDDVL--NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
++ G+ ++ +V+ N++I G + R A + M E G L T + L L +
Sbjct: 313 EMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLR 372
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+K + +E+ ++++ D +Y+++++ C ++ A ++ +M+R G++P++
Sbjct: 373 VHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVH 432
Query: 438 YNSLMEACCREDLLRPAKKLWDQM----------FASGCSGNLK---------------- 471
Y L+ A C + ++ A+ +D+M +++ G +
Sbjct: 433 YIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLD 492
Query: 472 --------TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
TY++LI+ F+ G++ A R+ M G PD + SL++G + + +
Sbjct: 493 EGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEK 552
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISL 550
E+ + D+ L I+ST L
Sbjct: 553 VLELIREMTAKDIALDSKIISTIYTCL 579
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 172/399 (43%), Gaps = 43/399 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
+L+ L ++ A+ + +M GV + +G I C+ A + + + +L E+
Sbjct: 117 TTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMC- 175
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E+ + V+ ++ G+CK R E KV +E+ R +PD + Y + + G V
Sbjct: 176 -ESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKV 234
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ V+ K + G+ P Y I + E + EA L ++ +D N L
Sbjct: 235 KKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTL 294
Query: 338 IGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I +S + + A+ MI + +VE
Sbjct: 295 ITGLSGVLEMDEAMGLLEEMIH----------------------GETMVE---------- 322
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ ++N ++ LC +GR+R+A+ V M G ++ +N L+ R ++ A +
Sbjct: 323 -PNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAME 381
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L D+M +SG + TY+ILI+ F ++ +++ A L M G+ P+ Y LL LC
Sbjct: 382 LMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALC 441
Query: 517 QETNLQAA---FEVFNKSVNHDVMLARSILSTFMISLCR 552
++ ++ A F+ +K+ DV+ ST + CR
Sbjct: 442 EQGMMEQARNFFDEMHKNCKLDVV----AYSTMIHGACR 476
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 125/271 (46%), Gaps = 3/271 (1%)
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D ++Y V G + + L + P Y + L ERR +A L
Sbjct: 77 DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136
Query: 320 EVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ + D LI G + D A+ M E G P + S L + CK
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+ + + +V++ +S D+ Y ++ LC G++++A V+ +M +GL+P+V Y
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML- 497
N L+ + C+E ++ A L + M G + + TYN LI+ S V E++ A+ L M+
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIH 316
Query: 498 -EKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
E V P+ T+ S++ GLC+ ++ AF+V
Sbjct: 317 GETMVEPNVVTFNSVIHGLCKTGRMRQAFQV 347
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
PR A F ++ +GR + L+ L + + L E +LS+ D SYN
Sbjct: 31 PRRAAPFLAVLLRRGRAEASARLNRLLRLV-------PLPESPALLSSLPSVRDAVSYNT 83
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+++ LC G +A + + P Y +LM A C E A L M ASG
Sbjct: 84 VLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASG 143
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
++ TY LI + +++ A+ L M E G+ P+ Y+ LL+G C+ +
Sbjct: 144 VRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVS 203
Query: 526 EVF----NKSVNHDVMLARSILSTFMISLCR 552
+VF + + DV++ ++ SLCR
Sbjct: 204 KVFEEMSGRGIEPDVVMYTGLID----SLCR 230
>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 203/456 (44%), Gaps = 24/456 (5%)
Query: 113 NKITLDSSVYRFIIPSLIQG---KNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGY 169
N +T D VY +I L + ++ Q+ V + + +G +S + G
Sbjct: 336 NGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVG---FSSAMDAYVKIGD 392
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR--ENSMINGSV 227
+ ++++ M + G+ + + + I FC+N ++ + + ++ K E S++ S
Sbjct: 393 LGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSA 452
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+ I GFCK + + F + +++ + C+PD I Y ++ G V + +
Sbjct: 453 L----IAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQA 508
Query: 288 RKLGVAPRTNDYREFILGLIVE---RRICEAKELGEVIVSGKFTIDDDVLNALI---GSV 341
G++P F L +++ R C + + G I D + I G+
Sbjct: 509 VNRGLSPNV-----FTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAA 563
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
A++ F M++K P + T L LCK KS + ++ + N D+
Sbjct: 564 QFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIA 623
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
YNV+++ G L A G+ + +G PDV +N+++ C L A +L+ +M
Sbjct: 624 IYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKM 683
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ-ETN 520
+ N T+ ILI F G ++ A+ +F MLE+G P+ TY+ L+ G + ++
Sbjct: 684 TSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSM 743
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+++ +++N+ + +++ S + LC+R L+
Sbjct: 744 MESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLM 779
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/490 (21%), Positives = 209/490 (42%), Gaps = 52/490 (10%)
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQV-----KVNKITLDSSVYRFI 125
F+ A Q F ++ + ILK + + I D V K N +T + +
Sbjct: 259 FHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFST-----L 313
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHR 183
I + + N KAF +F+ + N + P+ + + L+ L G +++ ++ +
Sbjct: 314 IDAYCKEGNLDKAFVLFDVMAGN--GVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDK 371
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRV 242
G++ +GF + + + LG+V+ + ++ N I+ +V++ ++I GFC+ R+
Sbjct: 372 GIKLDVVGFSSAMDAYVKIGDLGRVIQI---YKRMLNEGISPNVVSCSILIKGFCQNGRI 428
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
EA + ++ +P + Y + F G++ + + + K P T Y
Sbjct: 429 LEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVL 488
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRV 362
I GL C+ +G+ A+ FF + +G
Sbjct: 489 INGL------CKQGLVGD----------------------------ALRFFFQAVNRGLS 514
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + TL+ L + C+ ++VY ++ + D +Y +++ GR+ EA +
Sbjct: 515 PNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALML 574
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+M +K PDV Y +L++ C+ ++D M + + ++ YN+LI+ S
Sbjct: 575 FFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSR 634
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
G +E AL LF +++E+G PD T+ +++ C L A ++F K + +
Sbjct: 635 EGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAIT 694
Query: 543 LSTFMISLCR 552
+ + + CR
Sbjct: 695 FTILIDAFCR 704
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 158/340 (46%), Gaps = 13/340 (3%)
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER--- 280
N SV+ +I +C+ +++ + + + K F++ +V + L+GS+ +
Sbjct: 165 NHSVVYGFLIESYCRKGMFDKSVDIFMHVCV---KGIFVSPNVV---YLLLGSLIDSHCV 218
Query: 281 EVVLKKKRKLGVAPRTNDYR--EFILGLIVERRICE-AKELGEVIVSGKFTIDDDVLNAL 337
EV++ K +L A R + EF++ + + E + +V G F +D N +
Sbjct: 219 EVIVDKYGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKI 278
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ G D A +FN ++ G P + T S L CK D+ ++ V++ N
Sbjct: 279 LKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGV 338
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ Y++++ L +GRL + ++ KG+ DV ++S M+A + L +
Sbjct: 339 TPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQ 398
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
++ +M G S N+ + +ILI F + G I A LF +L+ G P TY++L+ G C
Sbjct: 399 IYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFC 458
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+ NL+ F ++ + + S + LC++ L+
Sbjct: 459 KSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLV 498
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 168/375 (44%), Gaps = 6/375 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
++L+A G + + ++++M + E TI + V I C+ +G L +
Sbjct: 451 SALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVN 510
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
R ++ +V + ++ FC+ K + A KV + + K D + Y I+ + G
Sbjct: 511 RG---LSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGR 567
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
V E ++ + K P Y I GL ++ + + + D + N
Sbjct: 568 VDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNV 627
Query: 337 LIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI S +A+ F ++E+G P + T + + C + D+ V+++ +++
Sbjct: 628 LINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQ 687
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR-EDLLRPA 454
+ ++ +++ C GR+ +A + +M +G +P++ Y+ L+ + + ++
Sbjct: 688 LRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESG 747
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
KL+++M + + N+ +Y+ILI + G ++ A F L+K + PD YT L+ G
Sbjct: 748 LKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRG 807
Query: 515 LCQETNLQAAFEVFN 529
C+ L A +++
Sbjct: 808 YCKVGRLTEAMMLYD 822
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 166/401 (41%), Gaps = 61/401 (15%)
Query: 110 VKVNKITLDSSV--YRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPE--ICNSLLAVL 164
V++ K+ + S+ Y +I + N + F ++ + +K CE P+ + + L+ L
Sbjct: 436 VQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCE---PDTIVYSVLINGL 492
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE------NAKLGQVLSMLDEVRKR 218
G + +AL+ F + +RG+ + + FC K+ ++ ML+
Sbjct: 493 CKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLN----- 547
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+ +V ++I G + RV+EA + ++ ++ KPD I Y + + +
Sbjct: 548 ---IKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSS 604
Query: 279 EREVVLKKKRKLGVAPRTNDYREFI------------LGL---IVERR------------ 311
+ K VAP Y I LGL +VER
Sbjct: 605 AGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMI 664
Query: 312 --ICEAKELGEVI-VSGKFTIDDDVLNALIGSVSSIDP-------RSAIVFFNFMIEKGR 361
C K L + + + K T + NA+ ++ ID A++ F+ M+E+G
Sbjct: 665 CCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTIL-IDAFCREGRMDDAMLMFSKMLEEGP 723
Query: 362 VPTLSTLSNLSKNLCK-RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P L T S L K ++ + +++Y + N+ ++ SY++++ LC G ++EA
Sbjct: 724 EPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEAS 783
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+ K L PDV Y L+ C+ L A L+D M
Sbjct: 784 CAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNM 824
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 116/320 (36%), Gaps = 76/320 (23%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCED-IGPEIC--NSLLAVLASDGYIDNAL 174
D Y +I L + K + +F+ F C++ + P+I N L+ + + +G+++ AL
Sbjct: 586 DVITYCTLIDGLCKLKKSSAGLCIFD---FMCKNAVAPDIAIYNVLINMHSREGHLEAAL 642
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIH 234
+F + RG + F N+MI
Sbjct: 643 GLFVHVVERGPKPDVFTF---------------------------NTMICC--------- 666
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
+C KR+++A ++ ++ + +P+ I + I+ + F G + + ++ K + G P
Sbjct: 667 -YCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEP 725
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFN 354
Y I G + + E S + +N
Sbjct: 726 NLVTYSCLIHGYFKSQSMME---------------------------------SGLKLYN 752
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+E P + + S L LCKR E ++ D+ +Y +++ C G
Sbjct: 753 EMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVG 812
Query: 415 RLREAYGVIQEMKRKGLDPD 434
RL EA + M L PD
Sbjct: 813 RLTEAMMLYDNMLLNRLTPD 832
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 133/308 (43%), Gaps = 34/308 (11%)
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
K+LDE+R + C PD I Y +V G V + L+ G P T Y + G
Sbjct: 1 MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTL 365
L R +A++L E M KG P +
Sbjct: 61 LFTAERWEDAEKLMEE----------------------------------MAHKGCPPNV 86
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
T + L LC+R + +EV + + + SYN ++ C ++ +A ++
Sbjct: 87 VTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVEL 146
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M +G PD+ YN+L+ A CR + A L Q+ GCS L +YN +I ++ G+
Sbjct: 147 MVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGK 206
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
+ AL L M+ KG+ PD TYT++ GLC+E ++ A F K + + + +
Sbjct: 207 TKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNA 266
Query: 546 FMISLCRR 553
++ LC+R
Sbjct: 267 ILLGLCKR 274
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 156/364 (42%), Gaps = 36/364 (9%)
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLII 233
+K+ DEM +G I + V + C+ ++ + L+ + +V +++
Sbjct: 1 MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGE--PNTVSYNIVL 58
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
G +R E+A K+++E+ + C P+ + + ++ G V VL++ K G
Sbjct: 59 KGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCT 118
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFF 353
P + Y + C+ K++ + A+ F
Sbjct: 119 PNSLSYNPLL------HAFCKQKKMDK----------------------------AMAFV 144
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
M+ +G P + + + L LC+ + D +++ L + SYN ++ L +
Sbjct: 145 ELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKA 204
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G+ +EA ++ EM KGL PD+ Y ++ CRED + A + + ++ G + Y
Sbjct: 205 GKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLY 264
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
N ++ + E A+ LF M+ G P+ +TYT L+EGL E ++ A ++ + +
Sbjct: 265 NAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCS 324
Query: 534 HDVM 537
V+
Sbjct: 325 RGVV 328
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 120/262 (45%), Gaps = 3/262 (1%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
++A K+ +EM+H+G + + F + I C + + +L+++ K S+
Sbjct: 68 EDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKY--GCTPNSLSYN 125
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++H FCK K++++A ++ + R C PD ++Y + G V +L + +
Sbjct: 126 PLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGK 185
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSA 349
G +P Y I GL + EA EL + ++S D + + D A
Sbjct: 186 GCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEA 245
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
I F + + G PT+ + + LCKR ++ ++++ + +N + +Y ++V
Sbjct: 246 IRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEG 305
Query: 410 LCTSGRLREAYGVIQEMKRKGL 431
L G ++EA ++ ++ +G+
Sbjct: 306 LAYEGLVKEARDLLGQLCSRGV 327
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 162/398 (40%), Gaps = 37/398 (9%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
C ++ GY++ + F +M G+ + I F I C+ + Q +L+E+
Sbjct: 262 CTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMV 321
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RIRECKPDFIAYRIVAEEFKLMG 275
+R +I G CK E+AF++ +L R KP+ Y + +
Sbjct: 322 RR--GWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKED 379
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ E++L + ++ G+ P TN Y I G A EL
Sbjct: 380 KLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYEL----------------- 422
Query: 336 ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
+ M ++G P + T + + LCK+ DE + +S +
Sbjct: 423 -----------------MDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D +Y +++S C + +M + G PD+ Y +L+ CR+ ++ ++
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESE 525
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L+++ + G KTY +I + G A++LF M G APD+ TY +L+ GL
Sbjct: 526 RLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGL 585
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
C+E+ L A +++ ++ + T C++
Sbjct: 586 CKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKK 623
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 85/198 (42%), Gaps = 1/198 (0%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M ++G P + + C + E + + D + +++ C G
Sbjct: 215 MCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGY 274
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ G +M GL P+V + +L+ C++ ++ A +L ++M G N+ T+
Sbjct: 275 VNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTT 334
Query: 476 LISKFSEVGEIEGALRLFHNMLEK-GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
LI + G E A RLF ++ G P+ TYT+++ G C+E L A + ++
Sbjct: 335 LIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQ 394
Query: 535 DVMLARSILSTFMISLCR 552
++ + +T + C+
Sbjct: 395 GLVPNTNTYTTLIDGHCK 412
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 82/180 (45%)
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
N + K E V + + ++ N ++ G + A + EM ++G+ P
Sbjct: 163 NFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSP 222
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
D + ++ ACC + A++ + M G + T ++I F + G + + F
Sbjct: 223 DCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYF 282
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
M+E G+AP+ +T+L+ GLC++ +++ AFE+ + V +T + LC++
Sbjct: 283 WKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKK 342
>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 133/557 (23%), Positives = 219/557 (39%), Gaps = 82/557 (14%)
Query: 11 TRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGF 70
T+ SQA+ N T P W+ L+ +L +L SLS + V + + L+ + AL F
Sbjct: 156 TKRSQAMARLIN-TEP---WSHELQSSLAELA--PSLSKTTVLQTLQ--LIRTPAKALHF 207
Query: 71 FNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
F W + FTH+ SY +++ L SR +NA + + F I
Sbjct: 208 FRWVEAK-GFTHNEQSYFLMIEILGRSRNLNAARN----------------FVFSIEKKS 250
Query: 131 QGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEM-SHRGVEF 187
G + K F E+ + P + NSLL+++ G A ++FDEM GV
Sbjct: 251 GGAESIKVFKTMKEI-----GVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTP 305
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
T F + +I GFC V+E F
Sbjct: 306 DTYTFNI-------------------------------------LIRGFCMNSMVDEGFW 328
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK--KRKLGVAPRTNDYREFILG 305
E+ +C PD + Y + + G V V+K K+ ++P Y I G
Sbjct: 329 FFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRG 388
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI--VFFNFMIEKGRVP 363
+++ + EA L +VS + N LI + I + + + G +P
Sbjct: 389 YCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIP 448
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
TL+ L K C K +E V++ +S D +Y+V+V LC G R A
Sbjct: 449 DTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFF 508
Query: 424 QEMKRK-------GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
E+ K G P V+ YN + E C + A++++ Q+ G + + +Y L
Sbjct: 509 DELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-TQDPPSYKTL 567
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I G E L ML + PDA TY +++GL ++ + A + K +
Sbjct: 568 ILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSH 627
Query: 537 MLARSILSTFMISLCRR 553
+ +I + + +L +
Sbjct: 628 LPTTAIFHSILAALVEK 644
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/419 (19%), Positives = 160/419 (38%), Gaps = 69/419 (16%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQ-----VKVNKITLDSSVYRFIIPSLI 130
+ PN + + ++Y ++++ + + + S+L + +K NKIT Y +I L
Sbjct: 371 KSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKIT-----YNTLIQGLC 425
Query: 131 QGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFS 188
+ + K + + + I P+ C N+L+ + G ++ A +F++MS V+
Sbjct: 426 EAQKLDKIKEILEGMVGDGGFI-PDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPD 484
Query: 189 TIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKV 248
+ + V + C+ + DE+ ++E +++H
Sbjct: 485 SATYSVLVRSLCQRGDFRRAEEFFDELAEKE-----------ILLHDV------------ 521
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
CKP AY + E G + E V ++ K G + Y+ ILG
Sbjct: 522 -------GCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPS-YKTLILGHCR 573
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
E +L +++ F D + +I G + DP A M++ +PT +
Sbjct: 574 EGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAI 633
Query: 368 LSNLSKNLCKRNK---------------------SDELVEVYKVLSANDYFTDMESYNVM 406
++ L ++ + D+ +L N Y ME +
Sbjct: 634 FHSILAALVEKERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEE---L 690
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
VSFLC S +L EA ++ K D+ ++++ C+ + A L+ ++ G
Sbjct: 691 VSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKG 749
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/494 (24%), Positives = 209/494 (42%), Gaps = 55/494 (11%)
Query: 47 LSPSLVARVI-NPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDS 105
LSP+ VA V+ + + +A FF WA +Q N+ H Y S++ LSLS + +
Sbjct: 117 LSPNFVAFVLKSDAIRGKPDIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRVRC 176
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF--SVFNEVKFNCEDIGPEICNSLLAV 163
+ + K +K F +VF NSL+
Sbjct: 177 IFGEFK------------------------EKGFLMTVF-------------AANSLIRS 199
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR----- 218
+ G ++ L ++ M G+E S ++ + F N G V SM E +R
Sbjct: 200 FGALGMVEELLWVWRRMKESGIEPS-----LYTFNFLLN---GLVNSMFIESAERVFEVM 251
Query: 219 ENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E I V++ +I G+CK ++A + ++ R +PD I Y + + G+
Sbjct: 252 ECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNF 311
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ ++ + G+ + Y I GL + R E + E + + + AL
Sbjct: 312 DSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTAL 371
Query: 338 IGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I + + + AI F M +G P T + LCK + DE VE ++ N+
Sbjct: 372 IDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEV 431
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ Y+ ++ L +GR+ EA +EM +G D YN+L++A + + A
Sbjct: 432 AVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALV 491
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L+ +M GC + TY ILIS + E AL+L+ M++KG+ P ++ +L GLC
Sbjct: 492 LFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLC 551
Query: 517 QETNLQAAFEVFNK 530
+ A ++ ++
Sbjct: 552 LSGKVARACKILDE 565
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 185/419 (44%), Gaps = 10/419 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+++ +L L S I + + V + ++ KI D Y +I + NT+KA F ++
Sbjct: 227 TFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDM 286
Query: 146 -KFNCEDIGPEICNSLLAVLA--SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
K N E P+ L + A S+G D+ L ++ EM RG+E + + I C++
Sbjct: 287 EKRNLE---PDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKD 343
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+ + S+ + + K+ I +I + K V EA + + ++ +PD +
Sbjct: 344 GRTVEGSSVFENMNKK--GCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDV 401
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y ++ G + E + + VA Y I GL R+ EA++ E +
Sbjct: 402 TYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEM 461
Query: 323 VSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
V D NALI +++ S A+V F M ++G T+ T + L L K +++
Sbjct: 462 VERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRN 521
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+E ++++ ++ S+ + LC SG++ A ++ E+ G+ P+ +F +
Sbjct: 522 EEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPETAF-EDM 580
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+ C+ A KL D + G + ILI+ + G + A++L H+ + G
Sbjct: 581 INVLCKAGRTEQACKLADGIVDRGREVPGRVRTILINALRKAGNADLAMKLMHSKIGIG 639
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/149 (19%), Positives = 67/149 (44%)
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N ++ G + E V + MK G++P + +N L+ + A+++++ M
Sbjct: 194 NSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMEC 253
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
++ +YN +I + + G + A+ F +M ++ + PD TY +L++ E N +
Sbjct: 254 GKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDS 313
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCR 552
++ + + + S + LC+
Sbjct: 314 CLHLYQEMEERGLEIPPHAYSLVIGGLCK 342
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 204/485 (42%), Gaps = 21/485 (4%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
LAL FF + + ++ H + R A+D +L + D Y +
Sbjct: 142 LALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSIL 201
Query: 126 IPSLI-QGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSH 182
+ SL QGK+ Q A + + P + N+++ +G ++ A +F EM
Sbjct: 202 LKSLCDQGKSGQ-ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 260
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE-VRKR---ENSMINGSVIAVLIIHGFCK 238
RG+ + + + C+ + + + L + V KR N N +I+G+
Sbjct: 261 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN------LIYGYSS 314
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+ +EA +V E+R PD + ++ G + E V G P
Sbjct: 315 TGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 374
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMI 357
Y + G + + + +L ++++ D N LI + ++ A++ FN M
Sbjct: 375 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR 434
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+ G P + T + LC+ K D+ +E + + D +YN ++ CT G L
Sbjct: 435 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 494
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+A +I E+ G+ D+ F++S++ C+ + A+ ++D G + Y++L+
Sbjct: 495 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLM 554
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ VG++E ALR+F M+ G+ P+ Y +L+ G C+ + +F + M
Sbjct: 555 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFRE------M 608
Query: 538 LARSI 542
L R I
Sbjct: 609 LQRGI 613
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 165/365 (45%), Gaps = 39/365 (10%)
Query: 227 VIAVLIIHGFCKGKRVEEAFKVL---------------------------------DELR 253
+IA ++ GFC+ KR +EA +L D LR
Sbjct: 160 IIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 219
Query: 254 IRE-----CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
+ C P+ +AY V + F G V + + K+ + G+ P Y + L
Sbjct: 220 MMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCK 279
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLST 367
R + +A+ +V+ + ++ N LI SS + A+ F M +P + T
Sbjct: 280 ARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVT 339
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
LS L +LCK K E +V+ ++ D+ SYN+M++ T G L + + M
Sbjct: 340 LSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML 399
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
G+ PD +N L++A +L A ++++M G ++ TY +I+ +G+++
Sbjct: 400 GDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMD 459
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
A+ F+ M+++GVAPD Y L++G C +L A E+ ++ +N+ + L S+ +
Sbjct: 460 DAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSII 519
Query: 548 ISLCR 552
+LC+
Sbjct: 520 NNLCK 524
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 195/444 (43%), Gaps = 21/444 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV--YRFIIPSLIQGKNTQKAFSVF 142
SY +LKSL + D +L+ + +V Y +I + + KA +F
Sbjct: 196 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLF 255
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E+ I P++ NS++ L +D A +M ++ V + + I+ +
Sbjct: 256 KEMVQ--RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS 313
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + + + E+R+ +S++ V +++ CK +++EA V D + ++ PD
Sbjct: 314 STGQWKEAVRVFKEMRR--HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 371
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+Y I+ + G + + + G+AP D+ F + LI C +
Sbjct: 372 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP---DFYTFNV-LIKAYANCGMLDKAM 427
Query: 321 VIVSG--KFTIDDDVLN-----ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+I + + DV+ A + + +D A+ FN MI++G P + L +
Sbjct: 428 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMD--DAMEKFNQMIDQGVAPDKYAYNCLIQ 485
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
C + E+ + N D+ ++ +++ LC GR+ +A + GL P
Sbjct: 486 GFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 545
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
D Y+ LM+ C + A +++D M ++G N+ Y L++ + ++G I+ L LF
Sbjct: 546 DAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLF 605
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQ 517
ML++G+ P Y+ +++GL Q
Sbjct: 606 REMLQRGIKPSTILYSIIIDGLFQ 629
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/515 (20%), Positives = 224/515 (43%), Gaps = 31/515 (6%)
Query: 55 VINPYLLTHHSLALGFF-----NWASQ------QPNFTHSPLSYHSILKSLSLSRQINAI 103
V +P ++ ++++ GFF N A Q ++Y+S++ +L +R ++
Sbjct: 227 VCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKA 286
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLL 161
++ L+Q+ ++ ++ Y +I ++A VF E++ + I P++ + L+
Sbjct: 287 EAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRH--SILPDVVTLSMLM 344
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
L G I A +FD M+ +G + + + + L + + D
Sbjct: 345 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD-------- 396
Query: 222 MINGSVIAV------LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
++ G IA ++I + +++A + +E+R KPD + YR V +G
Sbjct: 397 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 456
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ + + GVAP Y I G + +AKEL I++ +D +
Sbjct: 457 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 516
Query: 336 ALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
++I ++ + A F+ + G P S L C K ++ + V+ + +
Sbjct: 517 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 576
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ Y +V+ C GR+ E + +EM ++G+ P Y+ +++ + PA
Sbjct: 577 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPA 636
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K + +M SG + ++ TYNI++ + + A+ LF + V + T ++++G
Sbjct: 637 KMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 696
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
+ Q ++ A ++F S++ ++ + + MI+
Sbjct: 697 MFQTRRVEEAKDLF-ASISRSRLVPNVVTYSIMIT 730
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 115/569 (20%), Positives = 213/569 (37%), Gaps = 88/569 (15%)
Query: 28 RKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWAS---QQPNFTHSP 84
R+ TP+LE+ L+ + +PS A P +LA+ FN A+ Q P SP
Sbjct: 70 RRGTPVLERDLNGFLAALARAPSSAACRSGP------ALAVALFNRAASRAQGPRVL-SP 122
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
S+ Y ++ + + A + F +
Sbjct: 123 TSH---------------------------------TYAILMDCCTRAHRPELALAFFGQ 149
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTI----GFGVFIWKFC 200
+ + I N LL D AL D + HR E + + + + C
Sbjct: 150 LLRTGLRVNIIIANHLLEGFCEAKRTDEAL---DILLHRTPELGCVPDVFSYSILLKSLC 206
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ K GQ +L + ++ + +V+A +I GF K V +A + E+ R P
Sbjct: 207 DQGKSGQADDLL-RMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPP 265
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D + Y V ++ + E L++ V P Y I G + EA +
Sbjct: 266 DLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVF 325
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ + D L+ L+GS+ + A F+ M KG+ P + + + + +
Sbjct: 326 KEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATK 385
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
++ +++ ++ + D ++NV++ G L +A + EM+ G+ PDV Y
Sbjct: 386 GCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 445
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS----------------- 481
+++ A CR + A + ++QM G + + YN LI F
Sbjct: 446 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN 505
Query: 482 ------------------EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
++G + A +F + G+ PDA Y+ L++G C ++
Sbjct: 506 NGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEK 565
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCR 552
A VF+ V+ + + T + C+
Sbjct: 566 ALRVFDAMVSAGIEPNVVVYCTLVNGYCK 594
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 181/417 (43%), Gaps = 18/417 (4%)
Query: 113 NKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYI 170
+ I D + +I + KA +FNE++ + + P++ +++A L G +
Sbjct: 401 DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH--GVKPDVVTYRTVIAALCRIGKM 458
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D+A++ F++M +GV + I FC + L + ++ E+ N M V
Sbjct: 459 DDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN--NGMHLDIVFFS 516
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
II+ CK RV +A + D PD + Y ++ + + L+G + + V
Sbjct: 517 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 576
Query: 291 GVAPRTNDYREFILGLIVERRICEA----KELGEVIVSGKFTIDDDVLNALIGSVSSIDP 346
G+ P Y + G RI E +E+ + + + +++ L + ++
Sbjct: 577 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTV-- 634
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A + F+ M E G + T + + + L K DE + ++K L A + ++ + N M
Sbjct: 635 -PAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 693
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ + + R+ EA + + R L P+V Y+ ++ +E L+ A+ ++ M +GC
Sbjct: 694 IDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGC 753
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE-----GLCQE 518
N + N ++ + + EI A + E+ + + T L++ G C+E
Sbjct: 754 EPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 810
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 204/485 (42%), Gaps = 21/485 (4%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
LAL FF + + ++ H + R A+D +L + D Y +
Sbjct: 129 LALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSIL 188
Query: 126 IPSLI-QGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSH 182
+ SL QGK+ Q A + + P + N+++ +G ++ A +F EM
Sbjct: 189 LKSLCDQGKSGQ-ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 247
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE-VRKR---ENSMINGSVIAVLIIHGFCK 238
RG+ + + + C+ + + + L + V KR N N +I+G+
Sbjct: 248 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN------LIYGYSS 301
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+ +EA +V E+R PD + ++ G + E V G P
Sbjct: 302 TGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 361
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMI 357
Y + G + + + +L ++++ D N LI + ++ A++ FN M
Sbjct: 362 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR 421
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+ G P + T + LC+ K D+ +E + + D +YN ++ CT G L
Sbjct: 422 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 481
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+A +I E+ G+ D+ F++S++ C+ + A+ ++D G + Y++L+
Sbjct: 482 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLM 541
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ VG++E ALR+F M+ G+ P+ Y +L+ G C+ + +F + M
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFRE------M 595
Query: 538 LARSI 542
L R I
Sbjct: 596 LQRGI 600
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 165/365 (45%), Gaps = 39/365 (10%)
Query: 227 VIAVLIIHGFCKGKRVEEAFKVL---------------------------------DELR 253
+IA ++ GFC+ KR +EA +L D LR
Sbjct: 147 IIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 206
Query: 254 IRE-----CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
+ C P+ +AY V + F G V + + K+ + G+ P Y + L
Sbjct: 207 MMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCK 266
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLST 367
R + +A+ +V+ + ++ N LI SS + A+ F M +P + T
Sbjct: 267 ARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVT 326
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
LS L +LCK K E +V+ ++ D+ SYN+M++ T G L + + M
Sbjct: 327 LSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML 386
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
G+ PD +N L++A +L A ++++M G ++ TY +I+ +G+++
Sbjct: 387 GDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMD 446
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
A+ F+ M+++GVAPD Y L++G C +L A E+ ++ +N+ + L S+ +
Sbjct: 447 DAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSII 506
Query: 548 ISLCR 552
+LC+
Sbjct: 507 NNLCK 511
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 195/444 (43%), Gaps = 21/444 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV--YRFIIPSLIQGKNTQKAFSVF 142
SY +LKSL + D +L+ + +V Y +I + + KA +F
Sbjct: 183 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLF 242
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E+ I P++ NS++ L +D A +M ++ V + + I+ +
Sbjct: 243 KEMVQ--RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS 300
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + + + E+R+ +S++ V +++ CK +++EA V D + ++ PD
Sbjct: 301 STGQWKEAVRVFKEMRR--HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 358
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+Y I+ + G + + + G+AP D+ F + LI C +
Sbjct: 359 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP---DFYTFNV-LIKAYANCGMLDKAM 414
Query: 321 VIVSG--KFTIDDDVLN-----ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+I + + DV+ A + + +D A+ FN MI++G P + L +
Sbjct: 415 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKMD--DAMEKFNQMIDQGVAPDKYAYNCLIQ 472
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
C + E+ + N D+ ++ +++ LC GR+ +A + GL P
Sbjct: 473 GFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 532
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
D Y+ LM+ C + A +++D M ++G N+ Y L++ + ++G I+ L LF
Sbjct: 533 DAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLF 592
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQ 517
ML++G+ P Y+ +++GL Q
Sbjct: 593 REMLQRGIKPSTILYSIIIDGLFQ 616
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/515 (20%), Positives = 224/515 (43%), Gaps = 31/515 (6%)
Query: 55 VINPYLLTHHSLALGFF-----NWASQ------QPNFTHSPLSYHSILKSLSLSRQINAI 103
V +P ++ ++++ GFF N A Q ++Y+S++ +L +R ++
Sbjct: 214 VCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKA 273
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLL 161
++ L+Q+ ++ ++ Y +I ++A VF E++ + I P++ + L+
Sbjct: 274 EAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRH--SILPDVVTLSMLM 331
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
L G I A +FD M+ +G + + + + L + + D
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD-------- 383
Query: 222 MINGSVIAV------LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
++ G IA ++I + +++A + +E+R KPD + YR V +G
Sbjct: 384 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ + + GVAP Y I G + +AKEL I++ +D +
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 503
Query: 336 ALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
++I ++ + A F+ + G P S L C K ++ + V+ + +
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ Y +V+ C GR+ E + +EM ++G+ P Y+ +++ + PA
Sbjct: 564 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPA 623
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K + +M SG + ++ TYNI++ + + A+ LF + V + T ++++G
Sbjct: 624 KVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 683
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
+ Q ++ A ++F S++ ++ + + MI+
Sbjct: 684 MFQTRRVEEAKDLF-ASISRSRLVPSVVTYSIMIT 717
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 115/569 (20%), Positives = 213/569 (37%), Gaps = 88/569 (15%)
Query: 28 RKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWAS---QQPNFTHSP 84
R+ TP+LE+ L+ + +PS A P +LA+ FN A+ Q P SP
Sbjct: 57 RRGTPVLERDLNGFLAALARAPSSAACRSGP------ALAVALFNRAASRAQGPRVL-SP 109
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
S+ Y ++ + + A + F +
Sbjct: 110 TSH---------------------------------TYAILMDCCTRAHRPELALAFFGQ 136
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTI----GFGVFIWKFC 200
+ + I N LL D AL D + HR E + + + + C
Sbjct: 137 LLRTGLRVNIIIANHLLEGFCEAKRTDEAL---DILLHRTPELGCVPDVFSYSILLKSLC 193
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ K GQ +L + ++ + +V+A +I GF K V +A + E+ R P
Sbjct: 194 DQGKSGQADDLL-RMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPP 252
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D + Y V ++ + E L++ V P Y I G + EA +
Sbjct: 253 DLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVF 312
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ + D L+ L+GS+ + A F+ M KG+ P + + + + +
Sbjct: 313 KEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATK 372
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
++ +++ ++ + D ++NV++ G L +A + EM+ G+ PDV Y
Sbjct: 373 GCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 432
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS----------------- 481
+++ A CR + A + ++QM G + + YN LI F
Sbjct: 433 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN 492
Query: 482 ------------------EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
++G + A +F + G+ PDA Y+ L++G C ++
Sbjct: 493 NGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEK 552
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCR 552
A VF+ V+ + + T + C+
Sbjct: 553 ALRVFDAMVSAGIEPNVVVYCTLVNGYCK 581
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 180/417 (43%), Gaps = 18/417 (4%)
Query: 113 NKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYI 170
+ I D + +I + KA +FNE++ + + P++ +++A L G +
Sbjct: 388 DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH--GVKPDVVTYRTVIAALCRIGKM 445
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D+A++ F++M +GV + I FC + L + ++ E+ N M V
Sbjct: 446 DDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN--NGMHLDIVFFS 503
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
II+ CK RV +A + D PD + Y ++ + + L+G + + V
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563
Query: 291 GVAPRTNDYREFILGLIVERRICEA----KELGEVIVSGKFTIDDDVLNALIGSVSSIDP 346
G+ P Y + G RI E +E+ + + + +++ L + ++
Sbjct: 564 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTV-- 621
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A V F+ M E G + T + + + L K DE + ++K L A + ++ + N M
Sbjct: 622 -PAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 680
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ + + R+ EA + + R L P V Y+ ++ +E L+ A+ ++ M +GC
Sbjct: 681 IDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGC 740
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE-----GLCQE 518
N + N ++ + + EI A + E+ + + T L++ G C+E
Sbjct: 741 EPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCRE 797
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 156/333 (46%), Gaps = 10/333 (3%)
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRE--CKPDFIAYRIVAEEFKLMGSVFEREVV 283
++IA ++ GFC+ KR +EA +L R E C PD +Y I+ + G + + +
Sbjct: 112 AIIASHLLKGFCEAKRTDEALDILLH-RTPELGCVPDVFSYNILLKSLCNQGKSGQADNL 170
Query: 284 LKKKRKLGV--APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
L+ + G +P Y I G E + +A +L + +V D N+++ ++
Sbjct: 171 LRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHAL 230
Query: 342 S---SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
++D A F M+ K +P T +NL + E V V+K + +
Sbjct: 231 CKARAMDKAEA--FLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILP 288
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D+ + ++++ LC G+++EA V M KG +PDV YN ++ + L L+
Sbjct: 289 DVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF 348
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
D M G + + T+N+ I ++ G ++ A+ +F+ M + GV PD TY +++ LC+
Sbjct: 349 DLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI 408
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+ A E FN+ ++ V + + + C
Sbjct: 409 GKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 441
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 156/349 (44%), Gaps = 4/349 (1%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
AL F ++ G+ I + FCE + + L +L R E + ++
Sbjct: 96 ALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLH-RTPELGCVPDVFSYNIL 154
Query: 233 IHGFCKGKRVEEAFKVLDELRIRE--CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+ C + +A +L + C PD +AY V + F G V + + K+ +
Sbjct: 155 LKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQR 214
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G+ P Y + L R + +A+ +V+ + ++ N LI G S+ + A
Sbjct: 215 GIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEA 274
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ F M +P + TLS L +LCK K E +V+ ++ D+ SYN+M++
Sbjct: 275 VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNG 334
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
T G L + + M G+ PD +N ++A +L A ++++M G +
Sbjct: 335 YATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPD 394
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ TY +I+ +G+++ A+ F+ M+++GVAPD Y L++G C
Sbjct: 395 VVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTH 443
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 98/466 (21%), Positives = 178/466 (38%), Gaps = 53/466 (11%)
Query: 28 RKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWAS---QQPNFTHSP 84
R+ TP+L++ L+ + +PS A P +LA+ FN A+ Q P SP
Sbjct: 23 RRGTPVLDRDLNGFLAALARAPSSAACGSGP------ALAVALFNRAASRAQGPRVL-SP 75
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
SY Y ++ + + A + F +
Sbjct: 76 TSY---------------------------------TYAILMDCCTRAHRPELALAFFGQ 102
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTI----GFGVFIWKFC 200
+ + I + LL D AL D + HR E + + + + C
Sbjct: 103 LLRTGLRVDAIIASHLLKGFCEAKRTDEAL---DILLHRTPELGCVPDVFSYNILLKSLC 159
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
K GQ ++L + ++ + V+A +I GF K V +A + E+ R P
Sbjct: 160 NQGKSGQADNLL-RMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPP 218
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D + Y V ++ + E L++ V P Y I G + EA +
Sbjct: 219 DLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVF 278
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
+ + D L+ L+GS+ + A F+ M KG+ P + + + + +
Sbjct: 279 KEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATK 338
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
++ +++ ++ + D ++NV + G L +A + EM+ G+ PDV Y
Sbjct: 339 GCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 398
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
+++ A CR + A + ++QM G + + YN LI F G
Sbjct: 399 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG 444
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 145/370 (39%), Gaps = 25/370 (6%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
LAL FF + + ++ H + R A+D +L + D Y +
Sbjct: 95 LALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNIL 154
Query: 126 IPSLI-QGKNTQKAFSVFNEVKFNCEDIGPEIC-------NSLLAVLASDGYIDNALKMF 177
+ SL QGK+ Q N ++ E G +C N+++ +G ++ A +F
Sbjct: 155 LKSLCNQGKSGQAD----NLLRMMAE--GGTVCSPDVVAYNTVIDGFFKEGDVNKACDLF 208
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE-VRKR---ENSMINGSVIAVLII 233
EM RG+ + + + C+ + + + L + V KR N N +I
Sbjct: 209 KEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN------LI 262
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
+G+ + +EA +V E+R PD + ++ G + E V G
Sbjct: 263 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 322
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVF 352
P Y + G + + + +L ++++ D N I + ++ A++
Sbjct: 323 PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMII 382
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
FN M + G P + T + LC+ K D+ +E + + D +YN ++ CT
Sbjct: 383 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCT 442
Query: 413 SGRLREAYGV 422
G L + G+
Sbjct: 443 HGILLKTQGI 452
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 194/449 (43%), Gaps = 36/449 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++ + + D++ K+ K +L+ +Y II + Q N ++A + E
Sbjct: 335 VTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVRE 394
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ + D ++ +S++ + L +F+ + G + S I +G + + + K
Sbjct: 395 MEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGK 454
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ + LS+ E+ + + + ++I+GF AF + +E+ +PD Y
Sbjct: 455 VAKALSISKEMES--CGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIY 512
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
++ E F MG++ +L+K +K + P +R I G V
Sbjct: 513 NLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAV---------------- 556
Query: 325 GKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ D +SA+ + M G VPT+ T + L L +++K
Sbjct: 557 ------------------AGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRA 598
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
V V +S + +Y +++ SG + +A+ ++K GL DV Y +L+ A
Sbjct: 599 VSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRA 658
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
CC+ ++ A + +M N YNILI ++ G++ A L M E GV P+
Sbjct: 659 CCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPN 718
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
TYTS + C+ ++Q A +V + V+
Sbjct: 719 IHTYTSYINACCKAGDMQRAEKVIEEMVD 747
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 163/374 (43%), Gaps = 5/374 (1%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+ SL+ A + AL +EM G+E + + + + I F + ++ E
Sbjct: 301 VFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEA 360
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ + +S+ NG +I IIH C+ +E A +++ E+ Y + + ++
Sbjct: 361 KTKLSSL-NG-IIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQ 418
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE-RRICEAKELGEVIVSGKFTIDDDVL 334
+ + VV ++ ++ G P Y +L L V+ ++ +A + + + S ++
Sbjct: 419 NENKCLVVFERLKECGFKPSIISY-GCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTY 477
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
+ LI G + D +A F M+ G P + + L + CK D + + + +
Sbjct: 478 SMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQK 537
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
++ ++ +G ++ A + M+R G P V YN+L+ R+ ++
Sbjct: 538 ERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQR 597
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A + D+M +G + N TY I++ ++ G+I A F + E G+ D Y +LL
Sbjct: 598 AVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLR 657
Query: 514 GLCQETNLQAAFEV 527
C+ +Q+A V
Sbjct: 658 ACCKSGRMQSALAV 671
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/444 (19%), Positives = 178/444 (40%), Gaps = 61/444 (13%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F S +SY +L ++ S+ K+++ I ++ Y +I I + A
Sbjct: 434 GFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANA 493
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
F++F E+ + I N L+ G +D A+ + ++M ++ S F I
Sbjct: 494 FAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEG 553
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDELRI 254
+ + L LD +R+ +G V V+ +IHG + +V+ A VLD++ I
Sbjct: 554 YAVAGDMKSALDTLDLMRR------SGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSI 607
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
P+ Y I+ + G + + K ++ G+ Y + R C+
Sbjct: 608 AGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLL------RACCK 661
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+ + + + S I PR+ + +N +I+
Sbjct: 662 SGRMQSALAVTREM-----------SFQKI-PRNTFI-YNILID---------------G 693
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
+R E ++ K + + ++ +Y ++ C +G ++ A VI+EM GL P+
Sbjct: 694 WARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPN 753
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V Y +L++ R L A K +++M +G + +Y+ L++
Sbjct: 754 VKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVT---------------- 797
Query: 495 NMLEKGVAPDATTYTSLLEGLCQE 518
++L + + +TYT ++ +C+E
Sbjct: 798 SLLSRATVMEGSTYTGII-SVCRE 820
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 62/125 (49%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+ +M+ + G A + M+ +G++P+ + SL+ A +R A ++M
Sbjct: 267 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMK 326
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
+ G + TY+ILIS F+++ + + A LF K + + Y++++ CQ N++
Sbjct: 327 SEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNME 386
Query: 523 AAFEV 527
A E+
Sbjct: 387 RAEEL 391
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 134/561 (23%), Positives = 252/561 (44%), Gaps = 68/561 (12%)
Query: 30 WTPLLEQTLHQLGLRDSLSPS--LVARVI---------NPYLLTHHSL-------ALGFF 71
+ P + +TL L R+S++ + L +R++ LL SL AL F
Sbjct: 196 FVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVF 255
Query: 72 NWA---SQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS-VYRFIIP 127
+ A +P+ L+ + K+L+L+ +S+L+++K K+ + S Y +I
Sbjct: 256 SRAIERGAEPDSLLYSLAVQACCKTLNLA----MANSLLREMKEKKLCVPSQETYTSVIL 311
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
+ ++ N + A +E+ + + SL+ + + +AL +F +M + G
Sbjct: 312 ASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSP 371
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAF 246
+++ F V I +F +N G++ L+ +K E+ + SV V II G+ KG++ EEA
Sbjct: 372 NSVTFSVLIERFSKN---GEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEAL 428
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
K+ DE FI I++ K G + + +L+K G+ P Y +L
Sbjct: 429 KLFDESFETGLANVFICNTILSWLCK-QGKIDKATELLRKMESRGIGPNVVSYNNVMLAH 487
Query: 307 IVERRICEAK-------ELG--------EVIVSGKFTIDDD-----VLNALIGSVSSIDP 346
++ + A+ E G +++ G F D+ V+N + S ++
Sbjct: 488 CRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNG 547
Query: 347 RSAIVFFNFMIEKGRVPTL-STLSNL--SKNLC--------------KRNKSDELVEVYK 389
N + + G+ L+N+ K C K + D V Y+
Sbjct: 548 VVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYE 607
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+ AN ++ +Y ++ LC + R+ +A + EMK KG+ D+ Y +L+ C++
Sbjct: 608 EMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKS 667
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
+ A L+ ++ G + + YN LIS F +G + AL L+ ML+ G+ D TYT
Sbjct: 668 NMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYT 727
Query: 510 SLLEGLCQETNLQAAFEVFNK 530
+L++GL +E NL A +++ +
Sbjct: 728 TLIDGLLKEGNLILASDLYTE 748
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 186/432 (43%), Gaps = 46/432 (10%)
Query: 111 KVNKITLDSSVYRF--IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDG 168
K+ + L SV+ II ++G+ ++A +F+E F ICN++L+ L G
Sbjct: 398 KMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE-SFETGLANVFICNTILSWLCKQG 456
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC--ENAKLGQVL--SMLDEVRKRENSMIN 224
ID A ++ +M RG+ + + + + C +N L + + +ML++ K N +
Sbjct: 457 KIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYS 516
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
++I G FK DE + E + ++ + ++ G V++ ++
Sbjct: 517 ------ILIDG---------CFKNHDEQNVLE-----VVNQMTSSNIEVNGVVYQ--TII 554
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
K+G +T+ RE + +I E+R C + +S ID G +
Sbjct: 555 NGLCKVG---QTSKARELLANMIEEKRFCVS------CMSYNSIID--------GFIKEG 597
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
+ A+ + M G P + T ++L LCK N+ D+ +E+ + D+ +Y
Sbjct: 598 EMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG 657
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
++ C + A + E+ +GL+P YNSL+ + A L+ +M
Sbjct: 658 ALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKD 717
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G +L TY LI + G + A L+ M G+ PD YT ++ GL ++
Sbjct: 718 GLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKV 777
Query: 525 FEVFNKSVNHDV 536
++F + ++V
Sbjct: 778 VKMFEEMKKNNV 789
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 124/285 (43%), Gaps = 27/285 (9%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSV 341
++ + +LGV P + L+ I EAKEL +V+ D+ L+ S+
Sbjct: 184 IVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASL 243
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM- 400
P A+ F+ IE+G P S L +L+ C + + AN +M
Sbjct: 244 REEKPAEALEVFSRAIERGAEPD-SLLYSLAVQAC--------CKTLNLAMANSLLREMK 294
Query: 401 ---------ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
E+Y ++ G + +A EM G+ +V SL+ C+ + L
Sbjct: 295 EKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDL 354
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A L+ +M G S N T+++LI +FS+ GE+E AL + M G+ P ++
Sbjct: 355 GSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTI 414
Query: 512 LEGLCQETNLQAAFEVFNKSVN---HDVMLARSILSTFMISLCRR 553
++G + + A ++F++S +V + +ILS LC++
Sbjct: 415 IQGWLKGQKHEEALKLFDESFETGLANVFICNTILSW----LCKQ 455
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 4/211 (1%)
Query: 327 FTIDDDVLNALIGSVSSIDPRS--AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
F ++ N L+ + S D ++ A+ N M+E G +P + ++ L +RN E
Sbjct: 158 FEVNSRAFNYLLNAYSK-DRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEA 216
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
E+Y + A D + +++ + EA V +G +PD Y+ ++A
Sbjct: 217 KELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQA 276
Query: 445 CCREDLLRPAKKLWDQMFASG-CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
CC+ L A L +M C + +TY +I + G +E A+R M+ G++
Sbjct: 277 CCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISM 336
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
+ TSL+ G C+ +L +A ++F K N
Sbjct: 337 NVVAATSLITGHCKNNDLGSALDLFYKMENE 367
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 92/218 (42%), Gaps = 37/218 (16%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y S++ L + +++ + ++K + LD Y +I + N + A ++F+E
Sbjct: 619 ITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSE 678
Query: 145 VKFNCEDIGPEICNSLLA--------VLASDGY------------------IDNALK--- 175
+ + + NSL++ V A D Y ID LK
Sbjct: 679 LLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGN 738
Query: 176 ------MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
++ EM G+ I + V + + + +V+ M +E++K N++ +I
Sbjct: 739 LILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKK--NNVTPNVLIY 796
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
+I G + ++EAF++ DE+ + PD + I+
Sbjct: 797 NAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL 834
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 121/549 (22%), Positives = 228/549 (41%), Gaps = 23/549 (4%)
Query: 12 RISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSL----- 66
R+ ++ A +R A +L + LG S PS+ +++ LL H L
Sbjct: 96 RLLSRLLGAGHRPHLAASLVDILHRAALALGPHRSALPSVFDTLLS--LLADHGLLDDAV 153
Query: 67 -ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
AL PN + + IL L+ +RQ + + + + + + +
Sbjct: 154 RALARVRQLRVPPNTR----TCNHILLRLARNRQGGLVRRLFEHLPAPNVF----TFNIV 205
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHR 183
I L + +A ++F V+ P++ NSL+ G ++ + EM
Sbjct: 206 IDFLCKQGELVEARALF--VRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKS 263
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G + + I F + + + S E+ KR M N ++ + FCK V
Sbjct: 264 GCAADVVTYNALINCFSKFGWIEKAYSYFGEM-KRLGVMANVVTLSTFV-DAFCKEGLVR 321
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
EA K+ ++R+R P+ Y + + G + + V+L + G+ P Y +
Sbjct: 322 EAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV 381
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRV 362
GL E ++ A ++ ++ ++ + LI G + + A+ N M KG
Sbjct: 382 DGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGME 441
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
+S L LCK K DE + + + Y ++ +G+ EA +
Sbjct: 442 LDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVAL 501
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ ++ GL P+V Y +L++ C+ + A +D+M G N++ Y LI F +
Sbjct: 502 LHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCK 561
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
+G + A+ L + M++KG++ D YTSL++G ++ +LQ AF + K + + L
Sbjct: 562 IGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYC 621
Query: 543 LSTFMISLC 551
+ F+ C
Sbjct: 622 YTCFISGFC 630
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 162/377 (42%), Gaps = 3/377 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ + G+I+ A F EM GV + + F+ FC+ + + + + ++R
Sbjct: 273 NALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRV 332
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R M+ ++ G CK R+++A +LDE+ + P+ + Y ++ + G V
Sbjct: 333 R--GMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKV 390
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ VL + GV Y I G + + A +L + + +D + L
Sbjct: 391 AVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTL 450
Query: 338 IGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I + + A + M + G P + + K K E V + + +
Sbjct: 451 IWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGL 510
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ +Y ++ LC +G + EA +M+ GLDP+V Y +L++ C+ L A
Sbjct: 511 QPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVH 570
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L ++M G S + Y LI + G+++GA L M+E G+ D YT + G C
Sbjct: 571 LMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFC 630
Query: 517 QETNLQAAFEVFNKSVN 533
+Q A V ++ +
Sbjct: 631 NMNMMQEARGVLSEMIG 647
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 42/229 (18%)
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVE-VYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
RVP + N RN+ LV +++ L A + FT +N+++ FLC G L EA
Sbjct: 163 RVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPAPNVFT----FNIVIDFLCKQGELVEA 218
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ MK G PDV YNSL++ + L + L +M SGC+ ++ TYN LI+
Sbjct: 219 RALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINC 278
Query: 480 FSEVGEIEGA-----------------------------------LRLFHNMLEKGVAPD 504
FS+ G IE A ++LF M +G+ P+
Sbjct: 279 FSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPN 338
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI-SLCR 552
TYTSL++G C+ L A + ++ V H ++ + T M+ LC+
Sbjct: 339 EFTYTSLVDGTCKAGRLDDAIVLLDEMV-HQGLVPNVVTYTVMVDGLCK 386
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 150/376 (39%), Gaps = 58/376 (15%)
Query: 103 IDSVLKQVKVNK--ITLDSSVYRFIIPS------LIQGKNTQKAFSVFNEVKFNCEDIGP 154
+D K +++ + LD V++ ++P+ ++ G + +V ++V E G
Sbjct: 346 VDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGV 405
Query: 155 EICNSLLAVLASDGYIDN-----ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ N LL G+ N AL + +EM ++G+E +G IW C+ KL +
Sbjct: 406 K-ANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAK 464
Query: 210 SML---DEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
S+L D+ R N+ VI I+ F K + EA +L ++ +P+ + Y
Sbjct: 465 SLLHKMDDCGLRPNT-----VIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCA 519
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ + GS++E K R+LG+ P Y I G + +A L +V
Sbjct: 520 LIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKG 579
Query: 327 FTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
++D V +LI G + D + A MIE G
Sbjct: 580 MSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETG------------------------- 614
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
D+ Y +S C ++EA GV+ EM G+ PD + YN L+
Sbjct: 615 ----------LQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKY 664
Query: 446 CREDLLRPAKKLWDQM 461
+ + A L ++M
Sbjct: 665 QKLGNMEEASSLQNEM 680
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 65/124 (52%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P+V +N +++ C++ L A+ L+ +M A GCS ++ TYN LI + + GE+E L
Sbjct: 197 PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELL 256
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M + G A D TY +L+ + ++ A+ F + VM LSTF+ + C+
Sbjct: 257 VSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCK 316
Query: 553 RVLI 556
L+
Sbjct: 317 EGLV 320
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 157/361 (43%), Gaps = 36/361 (9%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L G + +A +FDEM RGV + + F I C L ++ R
Sbjct: 244 NVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETL--HRRM 301
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E + +I G C+ R+E+A V +++ R KP+ + + I+ + G
Sbjct: 302 SEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDA 361
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ ++ R+ GV P Y + GL C A++L
Sbjct: 362 ETMLELHREMRERGVRPDAVTYNAIVNGL------CRARDL------------------- 396
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
+SA M G P T + L CK + D +E+ + + A
Sbjct: 397 ---------KSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVG 447
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D +Y ++S L +GR +A V+ EM GL+PD + Y +++A CR+ ++ +L
Sbjct: 448 LDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRL 507
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+M G + TYN++++ F ++G+++ A L + M+ GV+PD TY LL+G C+
Sbjct: 508 LKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCK 567
Query: 518 E 518
Sbjct: 568 H 568
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 132/306 (43%), Gaps = 38/306 (12%)
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A V DE++ R + +++ + G + E + ++ + GV P Y I
Sbjct: 259 AQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQ 318
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT 364
GL RI +A+ + F M +G P
Sbjct: 319 GLCRVGRIEDARGV----------------------------------FEKMCGRGMKPN 344
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
+ L CK+ ++ ++E+++ + D +YN +V+ LC + L+ A G++
Sbjct: 345 AVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVV 404
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
EM+ GL PD Y +L++ C+E+ L A ++ M A G + TY LIS S+ G
Sbjct: 405 EMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAG 464
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF----EVFNKSVNHDVMLAR 540
A R+ M+E G+ PD TTYT +++ C++ +++ E+ NK V+
Sbjct: 465 RSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYN 524
Query: 541 SILSTF 546
I++ F
Sbjct: 525 VIMNGF 530
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 82/151 (54%), Gaps = 9/151 (5%)
Query: 383 ELVEVYKVLSANDYFTDMES---------YNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
+LV + ++ SA + F +M+S +N M+S +C +G L A + + M G+ P
Sbjct: 249 DLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTP 308
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
DV Y +L++ CR + A+ ++++M G N + ILI + G+ E L L
Sbjct: 309 DVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELH 368
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
M E+GV PDA TY +++ GLC+ +L++A
Sbjct: 369 REMRERGVRPDAVTYNAIVNGLCRARDLKSA 399
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 99/220 (45%), Gaps = 1/220 (0%)
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N +I G + D A M E G P + T L + LC+ + ++ V++ +
Sbjct: 279 NTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCG 338
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ + +++ C G + +EM+ +G+ PD YN+++ CR L+
Sbjct: 339 RGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKS 398
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A + +M ++G + TY LI + + E++ A+ + NM+ +GV D TYT+L+
Sbjct: 399 ASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALIS 458
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
GL + A V + + + + + + + CR+
Sbjct: 459 GLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRK 498
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+NV++ L G L A V EM+ +G+ V +N+++ CR L A+ L +M
Sbjct: 243 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMS 302
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ----E 518
+G + ++ TY LI VG IE A +F M +G+ P+A +T L++ C+ E
Sbjct: 303 EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAE 362
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
T L+ E+ + V D + +I++ LCR
Sbjct: 363 TMLELHREMRERGVRPDAVTYNAIVN----GLCR 392
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%)
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
EA ++ GL P+ +N LM R L A+ ++D+M + G + ++N +I
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
S G+++GA L M E GV PD TY +L++GLC+ ++ A VF K +
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342
Query: 538 LARSILSTFMISLCRR 553
+ + + + C++
Sbjct: 343 PNAVVFTILIDAHCKK 358
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 210/475 (44%), Gaps = 12/475 (2%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSV 106
+S S++ V N Y L H + + ++++++L L ++ +
Sbjct: 95 ISDSILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVL 154
Query: 107 LKQVKVNKITLDSSV-YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLA 165
K++ KI + V Y ++ L + +T+K S+ ++ + ++ L
Sbjct: 155 FKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALC 214
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMING 225
D +D A+ + +EM + + + + I C+ + +V ++L E+ N IN
Sbjct: 215 KDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEM---VNLNINP 271
Query: 226 SVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+V ++I G CK +VE+A +V+ + + +PD I Y + + + L G V V
Sbjct: 272 NVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVF 331
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSG---KFTIDDDVLNALIGS 340
R G+ P Y I G ++ + +A +L GE+ G +L+ LI
Sbjct: 332 NVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLI-E 390
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
V I I F+ M+ G P + S L K +E + ++ L N T++
Sbjct: 391 VGRIGDAKKI--FDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNI 448
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
Y V+++ LC + R+REA+ + +++ GL PDV YN ++ CRE L K + +
Sbjct: 449 SFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRK 508
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
M +GC N TYN+++ F +I + M +G + DATT L+ L
Sbjct: 509 MEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVL 563
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/459 (19%), Positives = 197/459 (42%), Gaps = 57/459 (12%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSV- 141
S + + + K++ + +A+ S+ +++++ I + S+ + S AFSV
Sbjct: 61 SVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTNSYCLRHRIDCAFSVL 120
Query: 142 ---------FNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV-EFSTIG 191
FN V FN +LL L ++ + +A+ +F ++ + E + +
Sbjct: 121 PIYLKTGIPFNVVTFN----------TLLGGLFAENKVTDAVVLFKKLVREKICEPNEVM 170
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+G + + + LS+L + ++ N+ + ++ +I CK ++ A +L+E
Sbjct: 171 YGTVMNGLSKRGHTEKTLSLL-RIMEQGNTKPDVRTYSI-VIDALCKDINLDAAINLLNE 228
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
++ + P+ Y + + +G + + +L + L + P + + I GL E +
Sbjct: 229 MKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGK 288
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
+ +A E+ MIEKG P + T S +
Sbjct: 289 VEDADEV----------------------------------MRHMIEKGVEPDIITYSAI 314
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
C R + D V+ VL ++ SY+++++ C L +A + E+ +KGL
Sbjct: 315 MDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGL 374
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
PD Y++++ + AKK++D+M G + ++ ++ L+ + + G +E A+
Sbjct: 375 KPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAML 434
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
LF + + + YT ++ GLC+ ++ A +F K
Sbjct: 435 LFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEK 473
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 175/376 (46%), Gaps = 30/376 (7%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR----KRENSMING 225
+D+A+ +F M S I F V+S+ E+R +S++N
Sbjct: 43 LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILN- 101
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI---VAEEFKLMGSVFERE- 281
++ + +C R++ AF VL P ++ I V L+G +F
Sbjct: 102 -----IVTNSYCLRHRIDCAFSVL---------PIYLKTGIPFNVVTFNTLLGGLFAENK 147
Query: 282 ----VVLKKK--RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
VVL KK R+ P Y + GL + L ++ G D +
Sbjct: 148 VTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYS 207
Query: 336 ALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I ++ I+ +AI N M +K P + T ++L LCK + +++ + +
Sbjct: 208 IVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNL 267
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ ++ ++++++ LC G++ +A V++ M KG++PD+ Y+++M+ C + A
Sbjct: 268 NINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRA 327
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+++++ + G N+ +Y+ILI+ + + + A++LF + +KG+ PD TY+++L G
Sbjct: 328 RRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHG 387
Query: 515 LCQETNLQAAFEVFNK 530
L + + A ++F++
Sbjct: 388 LIEVGRIGDAKKIFDE 403
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 5/185 (2%)
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME-SYNVMVSFLCTSGRLREAYGVIQE 425
T + L L NK + V ++K L E Y +++ L G + +++
Sbjct: 134 TFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRI 193
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M++ PDV Y+ +++A C++ L A L ++M N+ TYN LI ++G+
Sbjct: 194 MEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQ 253
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARS 541
E L M+ + P+ T++ L++GLC+E ++ A EV K V D++ +
Sbjct: 254 WEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSA 313
Query: 542 ILSTF 546
I+ +
Sbjct: 314 IMDGY 318
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/188 (19%), Positives = 87/188 (46%), Gaps = 1/188 (0%)
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
S L+ ++ + C R++ D V + ++ ++N ++ L ++ +A + ++
Sbjct: 98 SILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKK 157
Query: 426 MKRKGL-DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
+ R+ + +P+ Y ++M + L M +++TY+I+I +
Sbjct: 158 LVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDI 217
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILS 544
++ A+ L + M +K + P+ TY SL++GLC+ + + ++ VN ++ S
Sbjct: 218 NLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFS 277
Query: 545 TFMISLCR 552
+ LC+
Sbjct: 278 ILIDGLCK 285
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 196/427 (45%), Gaps = 15/427 (3%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSL-IQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLL 161
SVL +V D++ + +I L ++GK ++ V V+ C+ P++ NS++
Sbjct: 144 SVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQ---PDMVTYNSIV 200
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
+ G A M +M R V+ + I C + + +S+ E+ E
Sbjct: 201 NGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM---ETK 257
Query: 222 MINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
I SV+ ++ G CK + + +L ++ RE P+ I + ++ + F G + E
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+ K+ G++P Y + G ++ R+ EA + +++V K + D +LI
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 341 ---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
V +D + F + ++G V T S L + C+ K E+++ + ++
Sbjct: 378 YCMVKRVD--DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D+ +Y +++ LC +G+L +A + +++++ +D + Y +++E C+ + A L
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ + G N+ TY ++IS + G + A L M E G AP+ TY +L+ +
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 518 ETNLQAA 524
+ +L A+
Sbjct: 556 DGDLTAS 562
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 181/371 (48%), Gaps = 9/371 (2%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D+A+ +F EM + F F F A+ Q +LD ++ E + I ++ +
Sbjct: 70 DDAIALFQEMIRSRPLPGLVDFSRF---FSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126
Query: 231 -LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
++I+ FC+ + A+ VL ++ +PD + + L G V + V++ + +
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVE 186
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDP 346
G P Y + G+ A ++ + D + +I S+ ID
Sbjct: 187 NGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCID- 245
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+AI F M KG ++ T ++L + LCK K ++ + K + + + ++ ++NV+
Sbjct: 246 -AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ G+L+EA + +EM +G+ P++ YN+LM+ C ++ L A + D M + C
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
S ++ T+ LI + V ++ +++F N+ ++G+ +A TY+ L++G CQ ++ A E
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 527 VFNKSVNHDVM 537
+F + V+H V+
Sbjct: 425 LFQEMVSHGVL 435
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/440 (19%), Positives = 195/440 (44%), Gaps = 7/440 (1%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+P+ T ++++++ L L +++ ++ ++ N D Y I+ + + +T
Sbjct: 155 EPDTT----TFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTS 210
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
AF + +++ ++++ L DG ID A+ +F EM +G++ S + + +
Sbjct: 211 LAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C+ K +L ++ RE ++ + +++ F K +++EA ++ E+ R
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSRE--IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
P+ I Y + + + + + E +L + +P + I G + +R+ +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 317 ELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
++ I + + L+ G S + A F M+ G +P + T L L
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C K ++ +E+++ L + + Y ++ +C G++ +A+ + + KG+ P+V
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y ++ C++ L A L +M G + N TYN LI G++ + +L
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Query: 496 MLEKGVAPDATTYTSLLEGL 515
M G + DA++ +++ L
Sbjct: 569 MKSCGFSADASSIKMVIDML 588
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/475 (19%), Positives = 193/475 (40%), Gaps = 48/475 (10%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+ + +++ ++Q N + KQ+++N I + +I + T A+SV +
Sbjct: 89 VDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGK 148
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
V + N+L+ L +G + A+ + D M G + + + + C +
Sbjct: 149 VMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGD 208
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
ML RK E + V II C+ ++ A + E+ + K +
Sbjct: 209 TSLAFDML---RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + G + ++LK + P + + + E ++ EA EL
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL----- 320
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ MI +G P + T + L C +N+ E
Sbjct: 321 -----------------------------YKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ ++ N D+ ++ ++ C R+ + V + + ++GL + Y+ L++
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C+ ++ A++L+ +M + G ++ TY IL+ + G++E AL +F ++ + +
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471
Query: 504 DATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSILSTFMIS-LCRR 553
YT+++EG+C+ ++ A+ +F K V +VM T MIS LC++
Sbjct: 472 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY-----TVMISGLCKK 521
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 93/191 (48%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ I AI F MI +P L S + + + + +++ K L N +
Sbjct: 63 GIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHN 122
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ + N+M++ C + AY V+ ++ + G +PD + +N+L+ C E + A L D
Sbjct: 123 IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVD 182
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M +GC ++ TYN +++ G+ A + M E+ V D TY+++++ LC++
Sbjct: 183 RMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 520 NLQAAFEVFNK 530
+ AA +F +
Sbjct: 243 CIDAAISLFKE 253
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 131/295 (44%), Gaps = 13/295 (4%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWAS-QQPNFTH--------SP--LSYHSILKSLS 95
L +V+R I P ++T + L F Q+ N + SP ++Y++++
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
+ +++ +++L + NK + D + +I K VF +
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+ L+ G I A ++F EM GV + +G+ + C+N KL + L + +++
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+K + + G V+ II G CKG +VE+A+ + L + KP+ + Y ++ G
Sbjct: 465 QKSKMDL--GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
S+ E ++L+K + G AP Y I + + + + +L E + S F+ D
Sbjct: 523 SLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 194/449 (43%), Gaps = 36/449 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++ + + D++ K+ K +L+ +Y II + Q N ++A + E
Sbjct: 313 VTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVRE 372
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ + D ++ +S++ + L +F+ + G + S I +G + + + K
Sbjct: 373 MEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGK 432
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ + LS+ E+ + + + ++I+GF AF + +E+ +PD Y
Sbjct: 433 VAKALSISKEMES--CGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIY 490
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
++ E F MG++ +L+K +K + P +R I G V
Sbjct: 491 NLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAV---------------- 534
Query: 325 GKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ D +SA+ + M G VPT+ T + L L +++K
Sbjct: 535 ------------------AGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRA 576
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
V V +S + +Y +++ SG + +A+ ++K GL DV Y +L+ A
Sbjct: 577 VSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRA 636
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
CC+ ++ A + +M N YNILI ++ G++ A L M E GV P+
Sbjct: 637 CCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPN 696
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
TYTS + C+ ++Q A +V + V+
Sbjct: 697 IHTYTSYINACCKAGDMQRAEKVIEEMVD 725
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 163/374 (43%), Gaps = 5/374 (1%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+ SL+ A + AL +EM G+E + + + + I F + ++ E
Sbjct: 279 VFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEA 338
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ + +S+ NG +I IIH C+ +E A +++ E+ Y + + ++
Sbjct: 339 KTKLSSL-NG-IIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQ 396
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE-RRICEAKELGEVIVSGKFTIDDDVL 334
+ + VV ++ ++ G P Y +L L V+ ++ +A + + + S ++
Sbjct: 397 NENKCLVVFERLKECGFKPSIISY-GCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTY 455
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
+ LI G + D +A F M+ G P + + L + CK D + + + +
Sbjct: 456 SMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQK 515
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
++ ++ +G ++ A + M+R G P V YN+L+ R+ ++
Sbjct: 516 ERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQR 575
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A + D+M +G + N TY I++ ++ G+I A F + E G+ D Y +LL
Sbjct: 576 AVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLR 635
Query: 514 GLCQETNLQAAFEV 527
C+ +Q+A V
Sbjct: 636 ACCKSGRMQSALAV 649
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/444 (19%), Positives = 178/444 (40%), Gaps = 61/444 (13%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F S +SY +L ++ S+ K+++ I ++ Y +I I + A
Sbjct: 412 GFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANA 471
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
F++F E+ + I N L+ G +D A+ + ++M ++ S F I
Sbjct: 472 FAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEG 531
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDELRI 254
+ + L LD +R+ +G V V+ +IHG + +V+ A VLD++ I
Sbjct: 532 YAVAGDMKSALDTLDLMRR------SGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSI 585
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
P+ Y I+ + G + + K ++ G+ Y + R C+
Sbjct: 586 AGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLL------RACCK 639
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+ + + + S I PR+ + +N +I+
Sbjct: 640 SGRMQSALAVTREM-----------SFQKI-PRNTFI-YNILID---------------G 671
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
+R E ++ K + + ++ +Y ++ C +G ++ A VI+EM GL P+
Sbjct: 672 WARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPN 731
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V Y +L++ R L A K +++M +G + +Y+ L++
Sbjct: 732 VKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVT---------------- 775
Query: 495 NMLEKGVAPDATTYTSLLEGLCQE 518
++L + + +TYT ++ +C+E
Sbjct: 776 SLLSRATVMEGSTYTGII-SVCRE 798
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 62/125 (49%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+ +M+ + G A + M+ +G++P+ + SL+ A +R A ++M
Sbjct: 245 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMK 304
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
+ G + TY+ILIS F+++ + + A LF K + + Y++++ CQ N++
Sbjct: 305 SEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNME 364
Query: 523 AAFEV 527
A E+
Sbjct: 365 RAEEL 369
>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 602
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/519 (21%), Positives = 216/519 (41%), Gaps = 24/519 (4%)
Query: 4 RPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTH 63
+ +++A + + I R++P +W L D PS + ++ L +
Sbjct: 55 KDVSEIAAEVGKVI-----RSKP--RWEQSLLSDYPSFNFHD---PSFFSELLKQ--LNN 102
Query: 64 HSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
L+L FF W S QP F P+S + + +L ++ S L + + Y
Sbjct: 103 VFLSLRFFLWLSSQPEFLPHPVSCNKLFDALLEAKACVPAKSFLYSFEFSPEPASLENY- 161
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR 183
I + +G ++A F+ +K E N G D K+++ M
Sbjct: 162 --IRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMET 219
Query: 184 GVE----FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
GV+ T+G+ I FC + K+ + +L + E+ + + +I GFCK
Sbjct: 220 GVQKDVDIETVGY--LIQAFCNDNKVSRAYEILRQ--SLEDGLTPCNDAFNKLISGFCKE 275
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
K +++ + ++ PD Y+ + F + V + G AP Y
Sbjct: 276 KNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMY 335
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIE 358
I G ++ +A +L ++ F ++ N LI I + A+ + M++
Sbjct: 336 TTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLD 395
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
G T + + L LC ++DE + ++ + + D+ +YN ++ C G++ +
Sbjct: 396 SGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQ 455
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
+ +++E++ KGL P S Y L++ C+ ++ AK++W+ M G + T + +IS
Sbjct: 456 STDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRGLQPMVCTRDHIIS 515
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
E G + + ML+ + P T+ L++ L Q
Sbjct: 516 GLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSLIQ 554
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 89/197 (45%)
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
+E G P + L CK ++E+ + + D+ +Y +++ C +
Sbjct: 254 LEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMT 313
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
+A+ V +K +G PD+ Y +L+ C+ L A KLW +M G N +YN L
Sbjct: 314 LQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTL 373
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I F ++G ++ A++L+ ML+ G + +L+ GLC A++ F + ++
Sbjct: 374 IYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNI 433
Query: 537 MLARSILSTFMISLCRR 553
+ +T + CR
Sbjct: 434 VCDVITYNTLIQGFCRE 450
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 116/292 (39%), Gaps = 9/292 (3%)
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I C+G VEEA D L+ +P + + G +++ K +
Sbjct: 162 IRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRT---DLIWKLYEGMME 218
Query: 293 APRTNDYREFILGLIVE-----RRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDP 346
D +G +++ ++ A E+ + T +D N LI G +
Sbjct: 219 TGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNH 278
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+ + MI K R P + T + CK + + EV+ L Y DM Y +
Sbjct: 279 HRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTL 338
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ C G+L +A + EM KG P+ YN+L+ C+ L A KL+ +M SG
Sbjct: 339 IHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGY 398
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ N LI G + A F M K + D TY +L++G C+E
Sbjct: 399 KETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCRE 450
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 163/372 (43%), Gaps = 5/372 (1%)
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G++ TI F+ C + + + +L R E S + ++ +I C R +
Sbjct: 154 GLKTGTIQATTFLKCLCHAKRTDEAVDVLLH-RMSELSCVPDAISYNTVIKSLCGDSRSQ 212
Query: 244 EAFKVLDELRIR--ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
EA ++ + C PD +++ V F G V + + + + GV P Y
Sbjct: 213 EALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNS 272
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKG 360
+ L R + +A+ + +V D NA+I G S + + F M KG
Sbjct: 273 IVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKG 332
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
+P T S+ +LCK +S + E+++ ++ + D+ SY++++ T GR +
Sbjct: 333 LIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMN 392
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+ M KG+ + N L+ A + ++ A ++ +M G N+ TY+ LIS F
Sbjct: 393 NLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAF 452
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
+G + A+ F M+ G+ P+ Y SL+ G C +L A E ++ ++ +
Sbjct: 453 CRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPN 512
Query: 541 SI-LSTFMISLC 551
+ S+ + SLC
Sbjct: 513 IVFFSSIIHSLC 524
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/469 (20%), Positives = 200/469 (42%), Gaps = 43/469 (9%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+SI+ +L +R ++ + VL+Q+ + D Y II + +++ +F
Sbjct: 269 TYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFR-- 326
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
K + + P+ +S ++ L G +A ++F M+ +G + + + + +
Sbjct: 327 KMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEG 386
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ + ++ + + +++ ++I K ++EA V E++ + +P+ +
Sbjct: 387 RFADMNNLFHSMA--DKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVT 444
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + F MG + + + +G+ P T Y I G + + +AKE
Sbjct: 445 YSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKE------ 498
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKG-RVPTLSTLSNLSKNLCKRNKSD 382
F + M+ KG P + S++ +LC +
Sbjct: 499 ----------------------------FISEMMSKGLHRPNIVFFSSIIHSLCIEGRVM 530
Query: 383 ELVEVYK-VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+ +V+ V+ D T + ++N ++ C G++ +A+GV+ M G++PDV N+L
Sbjct: 531 DAQDVFNLVIHIGDRPT-IVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTL 589
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ C+ + L+ +M TYNI++ G A ++FH M++ G
Sbjct: 590 VSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGT 649
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
A D TY LL+GLC+ A +F+K D +IL+T + +L
Sbjct: 650 AVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINAL 698
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 115/558 (20%), Positives = 215/558 (38%), Gaps = 74/558 (13%)
Query: 44 RDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQIN-A 102
R L P+ VAR++ L T A F LK L +++ + A
Sbjct: 139 RPDLGPAFVARLLRAGLKTGTIQATTF--------------------LKCLCHAKRTDEA 178
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSL 160
+D +L ++ D+ Y +I SL +Q+A + + P++ N++
Sbjct: 179 VDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTV 238
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ----VLSMLDEVR 216
+ G + A +F+EM +GV + + C+ + + + M+D+
Sbjct: 239 IHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGV 298
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+ + N IIHG+ +E+ K+ ++ + PD + + G
Sbjct: 299 EPDGVTYNA------IIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGR 352
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ E + + G P Y + G E R + L + + +N
Sbjct: 353 SKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINI 412
Query: 337 LIGSVSS---IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE------- 386
LI + + +D A++ F M +G P + T S L C+ + + +E
Sbjct: 413 LISAHAKRGMMD--EAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMIS 470
Query: 387 --------VYKVL-----------SANDYFTDMES----------YNVMVSFLCTSGRLR 417
VY L A ++ ++M S ++ ++ LC GR+
Sbjct: 471 IGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVM 530
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+A V + G P + +NSL++ C + A + D M + G ++ T N L+
Sbjct: 531 DAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLV 590
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
S + + G+I+ L LF ML K V P TY +L+GL + AA ++F++ ++
Sbjct: 591 SGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTA 650
Query: 538 LARSILSTFMISLCRRVL 555
+ + LCR L
Sbjct: 651 VDIDTYKILLKGLCRNDL 668
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 177/433 (40%), Gaps = 54/433 (12%)
Query: 129 LIQGKNTQKAFSVFNEVKFNCEDIG----PEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
L+ G T+ F+ N + + D G N L++ A G +D A+ +F EM +G
Sbjct: 378 LLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQG 437
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVL---SMLDEVRKRENSMINGSVIAVLIIHGFCKGKR 241
V + + + I FC +L + S + + N+ + S +IHGFC
Sbjct: 438 VRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHS-----LIHGFCMHGD 492
Query: 242 VEEAFKVLDELRIREC-KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+ +A + + E+ + +P+ + + + + G V + + V +G P +
Sbjct: 493 LVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFN 552
Query: 301 EFILGLIVERRICEAKELGEVIVS--------------------GKFTIDDDVL------ 334
I G + ++ +A + + +VS GK IDD ++
Sbjct: 553 SLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGK--IDDGLILFREML 610
Query: 335 ------------NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
L G + + +A F+ MI+ G + T L K LC+ + +D
Sbjct: 611 HKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTD 670
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E + ++ L A D D+ N M++ L R EA + + GL P+VS Y ++
Sbjct: 671 EAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMI 730
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+E + A ++ M SGC+ + + N +I + G+I A + ++
Sbjct: 731 RNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIIS 790
Query: 503 PDATTYTSLLEGL 515
+A+T TSLL L
Sbjct: 791 LEAST-TSLLMSL 802
>gi|15233383|ref|NP_193806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75211707|sp|Q9SVH3.1|PP328_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g20740
gi|5262214|emb|CAB45840.1| putative protein [Arabidopsis thaliana]
gi|7268870|emb|CAB79074.1| putative protein [Arabidopsis thaliana]
gi|332658957|gb|AEE84357.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/549 (19%), Positives = 237/549 (43%), Gaps = 48/549 (8%)
Query: 6 ATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHS 65
A++ + I++ ++ A + R W P + L++L ++PS+VA V+ L +
Sbjct: 87 ASERLSPIARFVLDAFRKNR--NHWGPSVVSELNKL---RRVTPSIVAEVLK--LGNDAA 139
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
+A FF+WA +Q + H +Y++ L+ + A D + + + + +
Sbjct: 140 VAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEIL 199
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV 185
I + + + V+ ++K + N ++ L +GY D AL ++++
Sbjct: 200 IRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDF----- 254
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEA 245
+E+ ++ S ++++ G CK R+EE
Sbjct: 255 --------------------------------KEDGLVEESTTFMILVKGLCKAGRIEEM 282
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
++L +R CKPD AY + + G++ V + R+ + P Y ++G
Sbjct: 283 LEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVG 342
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPT 364
L + R+ EL + + ID ++ LI G V+ RSA + +++ G +
Sbjct: 343 LCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIAD 402
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN-VMVSFLCTSGRLREAYGVI 423
+ + + K LC N+ D+ ++++V + D E+ + +MV+++ + RL + V+
Sbjct: 403 IGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMN-RLSDFSNVL 461
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+ + G P + + C ++ + + G++ YNIL+ ++
Sbjct: 462 ERIGELGY-PVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKM 520
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
G+I+ +L LF+ M + G PD+++Y+ + ++ +++AA K + + + +
Sbjct: 521 GDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAY 580
Query: 544 STFMISLCR 552
+ LC+
Sbjct: 581 LSLTKGLCQ 589
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 192/475 (40%), Gaps = 72/475 (15%)
Query: 82 HSP---LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI-IPSLIQGKNTQK 137
H P +S + +L S+ ++ + S+ + S V I I SL
Sbjct: 50 HPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGL 109
Query: 138 AFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
AFSV ++ + P +L+ L G AL ++D +G F + +G I
Sbjct: 110 AFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLIN 169
Query: 198 KFCENAKLGQVLSMLDEVRK---RENSMINGSVIAVL----------------------- 231
C+ K + +L ++ K R N ++ V+ L
Sbjct: 170 GLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICI 229
Query: 232 -------IIHGFCKGKRVEEAFKVLDELRIRE-CKPDFIAYRIVAEEFKLMGSVFEREVV 283
+IHGFC + + A ++L+E+ ++E +PD + I+ + +G V E V
Sbjct: 230 DVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNV 289
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
K G+ P + G + + EAKE+
Sbjct: 290 FGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEV------------------------- 324
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
F+ M+E+G++P + + S L CK DE + + + + D +Y
Sbjct: 325 ---------FDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTY 375
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N ++ L SGR+ + +++ M+ G PD+ YN L++ + + L A L+ +
Sbjct: 376 NCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVD 435
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+G S N++TYNILI + G ++ A +F + KG P+ TY ++ GL +E
Sbjct: 436 TGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRRE 490
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 160/398 (40%), Gaps = 5/398 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGV-EFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
N LL+ + + + + + +G + S + +FI ++G S++ ++
Sbjct: 59 NKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFSVMAKIV 118
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
KR + ++ G C R EA + D + D + Y + MG
Sbjct: 119 KRGFGV--DPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGK 176
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ +L+K K GV P Y + GL E + EA L +V ID N+
Sbjct: 177 TRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNS 236
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRV-PTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
LI G + + A+ N M+ K V P + T + L LCK E V+ ++
Sbjct: 237 LIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKR 296
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D+ S N +++ C G + EA V M +G P+V Y++L+ C+ ++ A
Sbjct: 297 GLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEA 356
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+L +M + TYN L+ S+ G + L M G APD TY LL+
Sbjct: 357 LRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDD 416
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ L A +F V+ + + + LC+
Sbjct: 417 YLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCK 454
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 160/348 (45%), Gaps = 11/348 (3%)
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
F + V + C +L + +L E+ +++ M + +H CK +V EA
Sbjct: 16 FDNYTYFVLVRAHCLAGELQAAMDLLREM-EQQPGMAPTPSMYNFFVHALCKSGKVPEAM 74
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
+V+ ++ CKPD + + + G + E + VL + + G A Y I GL
Sbjct: 75 EVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK-GRVPT 364
R EA + + + + T D NA+I G S + A F M ++ G P
Sbjct: 135 SSAGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191
Query: 365 LSTLSNLSKNLCKRN---KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
T S L LCK + K+DEL++ +++ D + ++N +V C + L A
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQ--EMIGRKDCCASVVAFNTLVDGYCKAQDLDRARE 249
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
++ M G PDV Y+++++ CR + L ++M + GC ++ TY +L++
Sbjct: 250 LLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLC 309
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ G++ A RL MLE G P+A TY+ + +GLC+ L A ++
Sbjct: 310 KAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLT 357
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/446 (20%), Positives = 186/446 (41%), Gaps = 81/446 (18%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNK-ITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y ++++ L+ ++ A +L++++ + S+Y F + +L + +A V
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79
Query: 145 VKFN-CEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+K C+ P++ N+L+A L G +D A ++ DEM G + + + I
Sbjct: 80 MKDGACK---PDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136
Query: 202 NAKLGQ-VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ G+ VL M + N IIHGFCK ++ A+ L+E+
Sbjct: 137 AGRSGEAVLVMQGMTTTPDTQTYNA------IIHGFCKSGEIDRAYGFLEEM-------- 182
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
K++ G +P T Y I GL C++ L +
Sbjct: 183 --------------------------KQRAGCSPDTFTYSILINGL------CKSSNLRK 210
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
D++L +IG D +++V FN +++ CK
Sbjct: 211 A---------DELLQEMIGRK---DCCASVVAFNTLVD---------------GYCKAQD 243
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
D E+ + + D+ +Y+ ++ LC G + + + ++++M +G PDV Y
Sbjct: 244 LDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTV 303
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L+ C+ + A +L +M GC+ N TY+++ ++ +++ A L ++ +KG
Sbjct: 304 LVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKG 363
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFE 526
D + +LL + + +AAF+
Sbjct: 364 RITDVVAFEALLLSVKKRLLDRAAFQ 389
>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/510 (22%), Positives = 206/510 (40%), Gaps = 33/510 (6%)
Query: 63 HHSLALGFFNWASQQPNFTHSPLSYHSILKS--LSLSRQINAIDSVLKQVKVNKITLDS- 119
H LAL F W +QP L++ L + L +R ++ S+L+ + I S
Sbjct: 89 HGRLALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSI 148
Query: 120 ---------------SVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
SV+ +I ++ A F V CN +LA +
Sbjct: 149 FGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASM 208
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
D + +F EMS +G+ + F + I C L + ++L ++ EN +
Sbjct: 209 VKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQME--ENGFVP 266
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
V +++ +CK R + A +++D + + + D Y + + + ++L
Sbjct: 267 TIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLL 326
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
KK RK ++P Y I G + E +I A ++ + + + NALIG +
Sbjct: 327 KKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHV 386
Query: 345 -DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
D A+ + M G L + E ++VY V++ N + D +
Sbjct: 387 GDFEEALRLLDHMEAAGL------------RLNEHGNVTEAMKVYAVMNCNGHGADHFTC 434
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
NV+VS LC G+L EA + M R GL P+ Y+ ++ A +D M
Sbjct: 435 NVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIK 494
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G + TY L+ + G + A + + + A D+ Y +LL C+ NL
Sbjct: 495 CGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHE 554
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCRR 553
A +F+K V ++V+ S+ + LCR+
Sbjct: 555 AVALFDKMVQNNVLPDSYTYSSLLTGLCRK 584
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/465 (22%), Positives = 195/465 (41%), Gaps = 27/465 (5%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ F + ++Y+++L + A ++ + I D Y I +L +
Sbjct: 260 EENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRS 319
Query: 136 QKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
KA+ + +++ E I P N+L+ +G I A ++F+EMS + + + +
Sbjct: 320 AKAYLLLKKMRK--EMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYN 377
Query: 194 VFIWKFCENAKLGQVLSMLDE-----VRKRENSMINGS--VIAVLIIHG----------- 235
I C + L +LD +R E+ + + V AV+ +G
Sbjct: 378 ALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVL 437
Query: 236 ---FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
C+ ++ EA K L + P+ I Y + + +G K G
Sbjct: 438 VSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQ 497
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG-SVSSIDPRSAIV 351
P Y + GL + EAK+ + +D + N L+ + S + A+
Sbjct: 498 HPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVA 557
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY-KVLSANDYFTDMESYNVMVSFL 410
F+ M++ +P T S+L LC++ K+ V ++ + F + Y +V L
Sbjct: 558 LFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGL 617
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
+G + A+ +EM +KG PD +N+++++C R + A + M G NL
Sbjct: 618 SKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNL 677
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
TYNIL+ FS+ + L L+ M+ +G+ PD T+ SL+ GL
Sbjct: 678 ATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGL 722
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 159/415 (38%), Gaps = 16/415 (3%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
Y ++ L +G N +A N + + + + N+LLA G + A+ +FD+M
Sbjct: 503 TYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKM 562
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
V + + + C K + + R ++ V+ ++ G K
Sbjct: 563 VQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGR-GTLFPNHVMYTCLVDGLSKAG 621
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+ AF +E+ + PD +A+ + + G + + R GV P Y
Sbjct: 622 HPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYN 681
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS--------------IDP 346
+ G ++ + L ++ D ++LI +S I
Sbjct: 682 ILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIME 741
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
S +V M+E G +P + L +C+ ++ + A + + + + M
Sbjct: 742 ESTVVLHE-MLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAM 800
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
V L G+ +A V+ M R L P ++ + +LM CR+ + A KL M G
Sbjct: 801 VRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGL 860
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
++ YN+LI G+ A L+ M + + P+ TTY L++ + NL
Sbjct: 861 KLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNL 915
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 172/447 (38%), Gaps = 44/447 (9%)
Query: 134 NTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
N +A V+ NC G + CN L++ L DG + A K MS G+ ++I
Sbjct: 411 NVTEAMKVY--AVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSIT 468
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKV 248
+ I + S D++ K + GS ++ G CKG + EA K
Sbjct: 469 YDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGS-----LLKGLCKGGNLVEAKKF 523
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
L+ L D + Y + E G++ E + K + V P + Y + GL
Sbjct: 524 LNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCR 583
Query: 309 ERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLS 366
+ + A L G + G + + L+ +S P++A FF M++KG P
Sbjct: 584 KGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTV 643
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME---------SYNVMVSFLCTSGRLR 417
+ + + +R + ++ AND+F+ M +YN+++ L
Sbjct: 644 AFNAIIDSCSRRGQ---------MMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALL 694
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW------------DQMFASG 465
+ M R+G+ PD ++SL+ + + KL +M +G
Sbjct: 695 RYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENG 754
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
Y LI+ VG+I+GA +L M G ++++ GL + A
Sbjct: 755 VIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAM 814
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCR 552
V + + ++ + +T M CR
Sbjct: 815 LVLDHMLRMRLLPTIATFTTLMHRFCR 841
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 168/413 (40%), Gaps = 39/413 (9%)
Query: 70 FFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSL 129
F N P S + Y+++L S ++ ++ ++ N + DS Y ++ L
Sbjct: 523 FLNRLHYIPGAVDSVM-YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGL 581
Query: 130 IQGKNTQKAFSVF-----------NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFD 178
+ A +F N V + C L+ L+ G+ A F+
Sbjct: 582 CRKGKAVTAVCLFGTAMGRGTLFPNHVMYTC----------LVDGLSKAGHPKAAFYFFE 631
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK-RENSMINGSVIAVLIIHGFC 237
EM +G T+ F I C ++ GQ++ D R + +++HGF
Sbjct: 632 EMMKKGTCPDTVAFNAII-DSC--SRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFS 688
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYR----------IVAEEFKLMGSVF--EREVVLK 285
K + + + + PD + + I KL+G + E VVL
Sbjct: 689 KKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLH 748
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSI 344
+ + GV P+ Y I G+ I A +L + + + F + +A++ G +
Sbjct: 749 EMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCG 808
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
A++ + M+ +PT++T + L C+ K E +++ V+ D+ +YN
Sbjct: 809 KTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYN 868
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
V++ +C +G A+ + +EM+ + L P+++ Y L++A + L +KL
Sbjct: 869 VLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKL 921
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 135/583 (23%), Positives = 241/583 (41%), Gaps = 91/583 (15%)
Query: 24 TRPARKWTPLLEQTLHQLGLRDSLSPSLVARV--INPYLLTHHSLALGFFNWASQQPNFT 81
+RP + P L+ L SL+PSL+ + +NP LT AL FF W + NF
Sbjct: 34 SRPRWRKDPSLKT------LIPSLTPSLLCSLFNLNPDPLT----ALNFFRWIRRHHNFP 83
Query: 82 HSPLSYH--------------------SILKS----------LSLSRQINAIDSV----- 106
HS ++H S++KS L+L R++N +
Sbjct: 84 HSLATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDATFLLNLLRRMNTAAAAADHQH 143
Query: 107 -----LKQVKVNKITLDSSVYRFI--IPSLIQGKNTQKAFSVF-NEVKFN---------- 148
L N++ + S + + + SL + T SVF N + N
Sbjct: 144 QLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLG 203
Query: 149 --------------CEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
CE GP++ SL+ + ++ A +F M R + + +
Sbjct: 204 NMAVARLFFVRILRCEP-GPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR----NAVSY 258
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
I CE KL + L R RE+ +++ C+ R EA + E+
Sbjct: 259 TNLIHGLCEAGKLHEALEFW--ARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEM 316
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
R R C+P+ Y ++ + G + E +L + + GVAP + I G +R +
Sbjct: 317 RERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALI-GSYCKRGM 375
Query: 313 CE-AKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
E A + ++ S K + N LI G A+ N M+E P + T +
Sbjct: 376 MEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNT 435
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LC+ D +++++ + + D ++N + LC GR+ EA+ +++ +K K
Sbjct: 436 LIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKH 495
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+ + Y +L++ C+ + A L+ +M A C N T+N++I + G+++ A+
Sbjct: 496 VKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAM 555
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
L +M + V P TY L+E + +E + A E+ N+ ++
Sbjct: 556 LLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLIS 598
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 182/444 (40%), Gaps = 69/444 (15%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLA 162
VL ++ K+ + Y +I +GK+ +A ++ N K + P++ N+L+
Sbjct: 381 GVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLN--KMVESKLSPDVVTYNTLIH 438
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
L G +D+A ++F M G F F+ C ++G+ +L+ ++++
Sbjct: 439 GLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKA 498
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+ A +I G+CK ++E A + + EC P+ I + ++ + + G V + +
Sbjct: 499 NEHAYTA--LIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAML 556
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+++ K V P + Y ++VE EV+ F +++LN LI S
Sbjct: 557 LVEDMAKFDVKPTLHTY-----NILVE----------EVLKEYDFDRANEILNRLISS-- 599
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
G P + T + K C + + +E E+ + D
Sbjct: 600 -----------------GYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFI 642
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK------ 456
YN++++ G L A+GV++ M G +P Y+ LM+ E +
Sbjct: 643 YNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDV 702
Query: 457 -----------------------LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
L+++M GC NL TY+ LI+ +VG + A L+
Sbjct: 703 SLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLY 762
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQ 517
H+M E G++P + SLL C+
Sbjct: 763 HHMREGGISPSEIIHNSLLSSCCK 786
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 121/570 (21%), Positives = 228/570 (40%), Gaps = 80/570 (14%)
Query: 58 PYLLTHHSLALGFFNWASQQPN---FTHSP----LSYHSILKSLSLSRQINAIDSVLKQV 110
P L T+ SL LG+ + F P +SY +++ L + +++ ++
Sbjct: 222 PDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTNLIHGLCEAGKLHEALEFWARM 281
Query: 111 KVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYI 170
+ + Y ++ +L + +A S+F E++ + L+ L +G +
Sbjct: 282 REDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRM 341
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ---VLSMLDEVRKRENSMINGSV 227
D ALKM +EM +GV S + F I +C+ + VL +++ + N +
Sbjct: 342 DEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNEL 401
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
I GFC+GK ++ A +L+++ + PD + Y + +G V + +
Sbjct: 402 IC-----GFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLM 456
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDP 346
+ G +P + F++ L R+ EA ++ E + ++ ALI G +
Sbjct: 457 IRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKI 516
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A F M+ + +P T + + L K K + + + + ++ D + +YN++
Sbjct: 517 EHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNIL 576
Query: 407 V--------------------------------SFL---CTSGRLREAYGVIQEMKRKGL 431
V +F+ C+ GRL EA ++ ++K +G+
Sbjct: 577 VEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGV 636
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL-----ISKFSEVGEI 486
D YN L+ A LL A + +MF +GC + TY+IL I K + G
Sbjct: 637 LLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSN 696
Query: 487 EGALR------------------------LFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
L LF M E G P+ TY+ L+ GLC+ L
Sbjct: 697 PVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLN 756
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCR 552
AF +++ + + I ++ + S C+
Sbjct: 757 VAFSLYHHMREGGISPSEIIHNSLLSSCCK 786
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/487 (21%), Positives = 212/487 (43%), Gaps = 16/487 (3%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQ-QPNFTHSPLSYHSILKSLSLSRQI- 100
LR + +++ V+N L H + LGF A + ++ +++ ++++ L ++
Sbjct: 101 LRIPVHEFILSIVVNSCCLMHRT-DLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVK 159
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSL 160
+A+ K V+ N + +Y ++ L + +TQKAF + ++ +
Sbjct: 160 DAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIV 219
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
+ DG +D A + +EM + + + I C+ LS + VR
Sbjct: 220 IDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCK-------LSQWENVRTLFL 272
Query: 221 SMINGSVIAVL-----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
MI+ ++ + +I G CK +VE+A +++ + + PD I Y ++ + + L G
Sbjct: 273 EMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRG 332
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
V + + P Y I G +++I EA ++ I N
Sbjct: 333 QVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCN 392
Query: 336 ALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
L+ + + +SA FF+ M+ G +P L T L K +E + + L
Sbjct: 393 VLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERR 452
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
T+++ Y ++ LC +G+L +A+ +++ GL PDV Y +++ C+E LL A
Sbjct: 453 REDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA 512
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K + +M +GC + +TYN+++ F ++ + K + +A T L++
Sbjct: 513 KDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDI 572
Query: 515 LCQETNL 521
+ ++ ++
Sbjct: 573 IAEDPSI 579
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/480 (19%), Positives = 198/480 (41%), Gaps = 63/480 (13%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSV- 141
S S+ +LK++ + +++ S+ +++ +I + + ++ S T FSV
Sbjct: 71 SVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVL 130
Query: 142 ---------FNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV-EFSTIG 191
+NEV F +L+ L ++ + +A+ +F ++ + E + +
Sbjct: 131 AIHFKKGIPYNEVTFT----------TLIRGLFAENKVKDAVHLFKKLVRENICEPNEVM 180
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKREN-SMINGSVIAVLIIHGFCKGKRVEEAFKVLD 250
+G + C K G D +R E S + ++I FCK ++ A +L+
Sbjct: 181 YGTVMNGLC---KKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLN 237
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
E++ + PD Y + + + + + L + P + I GL E
Sbjct: 238 EMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEG 297
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
++ +A+E+ +MIEKG P + T +
Sbjct: 298 KVEDAEEI----------------------------------MRYMIEKGVDPDVITYNM 323
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
+ R + D E++ + D+ SYN++++ ++ EA V +E+ +KG
Sbjct: 324 IIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKG 383
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L P + N L+ + A+ +D+M ++G +L T+ L+ + + G +E A+
Sbjct: 384 LKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAM 443
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK----SVNHDVMLARSILSTF 546
FH + + + YT++++GLC+ L A F K ++ DV+ +++S +
Sbjct: 444 SHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGY 503
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 104/218 (47%), Gaps = 2/218 (0%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLS-TLSNLSKNLCKRNKSDELVEVYKVLSAND 395
L+ ++ + S++V I K R+P LS + + C +++D V +
Sbjct: 78 LLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKG 137
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL-DPDVSFYNSLMEACCREDLLRPA 454
+ ++ ++ L ++++A + +++ R+ + +P+ Y ++M C++ + A
Sbjct: 138 IPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKA 197
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
L M N +TY I+I F + G ++GA L + M +K + PD TY++L++
Sbjct: 198 FDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDA 257
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
LC+ + + +F + ++ ++ ++ + LC+
Sbjct: 258 LCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCK 295
>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Brachypodium distachyon]
Length = 864
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 159/372 (42%), Gaps = 13/372 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L +G + A ++ EM+H GV+ ++ + + + C+ K V + D VR
Sbjct: 318 NRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRS 377
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
M V ++H +C A ++LDE+ + C P+ Y ++ + G
Sbjct: 378 --GVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRT 435
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E E +L++ + G + T I GL ++ E+ IV G + L L
Sbjct: 436 TEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKL----EMAMDIVDGMWNEGRLALRRL 491
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
S S+ S+I K +P T S L LCK + DE + + D
Sbjct: 492 GNSFVSLVSDSSI-------SKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDIS 544
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D Y+ + C G+ A V+++M+++ +P YN L+ + KL
Sbjct: 545 PDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKL 604
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+M G S N+ TYN LI F G + A+ L ML+ + P+ T++ L++ C+
Sbjct: 605 MSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCK 664
Query: 518 ETNLQAAFEVFN 529
+ AA VF+
Sbjct: 665 TADFSAAQRVFD 676
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 175/400 (43%), Gaps = 60/400 (15%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+LL L++ G +D A ++FD M R EFS+ G+ +C + L++LD + +
Sbjct: 147 NALLEALSAAGRMDLARRVFDAMPARN-EFSS---GILARGYCRAGRSADALAVLDAMPE 202
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
N ++ +V+A GFC+ RV+EA +++D +R +
Sbjct: 203 M-NLVVCNTVVA-----GFCREGRVDEAERLVDRMRAQ---------------------- 234
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA----KELGEVIVSGKFTIDD-- 331
G+AP + I L R+ EA ++ E G D
Sbjct: 235 -------------GLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPRPDQVT 281
Query: 332 -DVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
DV+ + +D A V + M G + + + + L K + E E+
Sbjct: 282 FDVMLSGFCDAGMVD--EATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSE 339
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGV--IQEMKRKG-LDPDVSFYNSLMEACCR 447
++ + +YN++V LC G+ A+ V +++ R G + PDV Y SL+ A C
Sbjct: 340 MAHEGVQPNSYTYNIIVDGLCKEGK---AFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCS 396
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+ A ++ D+M GC+ NL TYN+L+ + G RL M EKG + D +
Sbjct: 397 KGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTAS 456
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
+++GLC+ + L+ A ++ + N + R + ++F+
Sbjct: 457 CNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFV 496
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/467 (20%), Positives = 194/467 (41%), Gaps = 65/467 (13%)
Query: 151 DIGPE----ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
D PE +CN+++A +G +D A ++ D M +G+ + + F I C+ ++
Sbjct: 198 DAMPEMNLVVCNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVL 257
Query: 207 QVLSMLDEVRKRENSMIN--GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ + +++++ + V +++ GFC V+EA ++D +R +Y
Sbjct: 258 EAYRIFNDMQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESY 317
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
G V E + +L + GV P + Y + GL E + + + + + + S
Sbjct: 318 NRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRS 377
Query: 325 GKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
G T D +L+ + S + +A + M +KG P L T + L ++L K ++ E
Sbjct: 378 GVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTE 437
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG------------- 430
+ + + +S Y D S N+++ LC + +L A ++ M +G
Sbjct: 438 VERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVS 497
Query: 431 ----------LDPDVSFYNSLMEACCREDLLRPAKK---------------LWD------ 459
PD Y++LM A C+E AKK ++D
Sbjct: 498 LVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGY 557
Query: 460 --------------QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
M C+ + ++YN+LI F E + + L+L M EKG++ +
Sbjct: 558 CMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNV 617
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
TY SL++ C + A + ++ + ++++ + + + C+
Sbjct: 618 MTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCK 664
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 27/154 (17%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM- 461
YN ++ RL + +++ G PDV N+L+EA + A++++D M
Sbjct: 111 YNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMDLARRVFDAMP 170
Query: 462 ----FASG------CSG----------------NLKTYNILISKFSEVGEIEGALRLFHN 495
F+SG C NL N +++ F G ++ A RL
Sbjct: 171 ARNEFSSGILARGYCRAGRSADALAVLDAMPEMNLVVCNTVVAGFCREGRVDEAERLVDR 230
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
M +G+AP+ T+ + LC+ + A+ +FN
Sbjct: 231 MRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFN 264
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
G P YN L+ A RED L + L+ + +G + ++ T N L+ S G ++ A
Sbjct: 103 GAAPPTPVYNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMDLA 162
Query: 490 LRLFHNMLEKGVAPDATTYTS--LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
R+F M P ++S L G C+ A V + ++++ ++++ F
Sbjct: 163 RRVFDAM------PARNEFSSGILARGYCRAGRSADALAVLDAMPEMNLVVCNTVVAGF 215
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 163/372 (43%), Gaps = 38/372 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L G I A D++ G + +G I C K+G+ + LD +++
Sbjct: 11 NTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLC---KVGETRAALDLLQR 67
Query: 218 RENSMIN-GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+ ++ +V+ +I+G CK K V +AF + E+ + P+ + Y + F ++G
Sbjct: 68 VDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGK 127
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ + + K + P + + G +R++ E K +
Sbjct: 128 LKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTV------------------ 169
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
F M+++G +P + T ++L + + ++ ++
Sbjct: 170 ----------------FAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGV 213
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ SYN++++ C ++ +A + EM K + P+V YNSL++ + + A +
Sbjct: 214 NPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQ 273
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L DQM G N+ TYN +I + +++ A+ L ++G+ P TYT L++GLC
Sbjct: 274 LVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLC 333
Query: 517 QETNLQAAFEVF 528
+ L+ A +F
Sbjct: 334 KGGRLKDARNIF 345
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 138/322 (42%), Gaps = 1/322 (0%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I G C ++ +AF D+L D ++Y + +G +L++
Sbjct: 13 LIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKL 72
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAI 350
V Y I G+ ++ + +A +L +VS + + +ALI + + AI
Sbjct: 73 VQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAI 132
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
FN +I + P T + L CK K E V+ ++ D+ +YN +V
Sbjct: 133 DLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGY 192
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
+ A + M + G++PD+ YN L+ C+ + A L+++M N+
Sbjct: 193 RLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNV 252
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TYN LI S+ G I AL+L M ++GV P+ TY S+++ L + + A + K
Sbjct: 253 VTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITK 312
Query: 531 SVNHDVMLARSILSTFMISLCR 552
+ + + + + LC+
Sbjct: 313 FKDQGIQPSMYTYTILIDGLCK 334
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 88/169 (52%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P TL+ L K LC + + + + L A + D SY ++ LC G R A
Sbjct: 2 GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
++Q + K + + YN+++ C++ + A L+ +M + G S N+ TY+ LIS
Sbjct: 62 LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
F VG+++ A+ LF+ ++ + + PD T+ L++G C++ ++ VF
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVF 170
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 90/172 (52%), Gaps = 10/172 (5%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+S++ L +++N S+ + + D Y +I + K KA ++FNE
Sbjct: 183 VTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNE 242
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ +C++I P + NSL+ L+ G I AL++ D+M RGV + + + I +
Sbjct: 243 M--HCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKT 300
Query: 203 AKLGQVLSMLDEVRKR--ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
++ + ++++ + + + + SM ++ +I G CKG R+++A + ++L
Sbjct: 301 HQVDKAIALITKFKDQGIQPSMYTYTI----LIDGLCKGGRLKDARNIFEDL 348
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/493 (24%), Positives = 220/493 (44%), Gaps = 47/493 (9%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS-VYRFIIPSLIQGKNT 135
+P+ L+ + K+L L+ +S+L+++K K+ + S Y +I + ++ N
Sbjct: 265 EPDSLLYSLAVQACCKTLDLA----MANSLLREMKEKKLCVPSQETYTSVILASVKQGNM 320
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
A + +E+ + + SL+ + + +AL +FD+M G +++ F V
Sbjct: 321 DDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVL 380
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRI 254
I F +N G++ L+ +K E + SV V II G+ KG++ EEA K+ DE
Sbjct: 381 IEWFRKN---GEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFE 437
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL-------- 306
F+ I++ K G E +L K G+ P Y +LG
Sbjct: 438 TGLANVFVCNTILSWLCK-QGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDL 496
Query: 307 -------IVERRICEAKELGEVIVSGKFTIDDD-----VLNALIGSVSSIDPRSAIVFFN 354
I+E+ + +++ G F D+ V+N + S ++ N
Sbjct: 497 ARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIIN 556
Query: 355 FMIEKGRVPTL-STLSNL--SKNLC--------------KRNKSDELVEVYKVLSANDYF 397
+ + G+ L+N+ K LC K + D V Y+ + N
Sbjct: 557 GLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGIS 616
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
++ +Y +++ LC + R+ +A + EMK KG+ D+ Y +L++ C+ + A L
Sbjct: 617 PNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASAL 676
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ ++ G + + YN LIS F +G + AL L+ ML+ G+ D TYT+L++GL +
Sbjct: 677 FSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLK 736
Query: 518 ETNLQAAFEVFNK 530
+ NL A E++ +
Sbjct: 737 DGNLILASELYTE 749
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 194/450 (43%), Gaps = 42/450 (9%)
Query: 111 KVNKITLDSSVYRF--IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDG 168
K+ + L SV+ II ++G+ ++A +F+E F +CN++L+ L G
Sbjct: 399 KMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE-SFETGLANVFVCNTILSWLCKQG 457
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC--ENAKLGQVL--SMLDEVRKRENS--- 221
D A ++ +M RG+ + + + + C +N L +++ ++L++ K N
Sbjct: 458 KTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYS 517
Query: 222 -MING-------------------------SVIAVLIIHGFCKGKRVEEAFKVLDEL--R 253
+I+G V+ II+G CK + +A ++L +
Sbjct: 518 ILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEE 577
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
R C ++Y + + F G + ++ G++P Y + GL R+
Sbjct: 578 KRLCV-SCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMD 636
Query: 314 EAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
+A E+ + + + +D ALI G + SA F+ ++E+G P+ ++L
Sbjct: 637 QALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLI 696
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
+++YK + + D+ +Y ++ L G L A + EM+ GL
Sbjct: 697 SGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLV 756
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
PD Y ++ ++ K++++M + + N+ YN +I+ G ++ A RL
Sbjct: 757 PDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRL 816
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
ML+KG+ PD T+ L+ G Q NLQ
Sbjct: 817 HDEMLDKGILPDGATFDILVSG--QVGNLQ 844
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 154/358 (43%), Gaps = 23/358 (6%)
Query: 210 SMLDEVRKRENSMING----SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+M D +R ++ + +G V A +I G CK + A + D++ P+ + +
Sbjct: 319 NMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFS 378
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVS 324
++ E F+ G + + KK LG+ P I G + ++ EA +L E +
Sbjct: 379 VLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFET 438
Query: 325 G--KFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
G + + +L+ L + + A + M +G P + + +N+ C++ D
Sbjct: 439 GLANVFVCNTILSWLCKQGKTDE---ATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMD 495
Query: 383 ELVEVY-----KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
V+ K L N+Y +Y++++ + + A V+ M ++ +
Sbjct: 496 LARIVFSNILEKGLKPNNY-----TYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVV 550
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASG--CSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y +++ C+ A++L M C + +YN +I F + GE++ A+ +
Sbjct: 551 YQTIINGLCKVGQTSKARELLANMIEEKRLCVSCM-SYNSIIDGFFKEGEMDSAVAAYEE 609
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
M G++P+ TYTSL+ GLC+ + A E+ ++ N V L + C+R
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKR 667
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 11/228 (4%)
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS--AIVFFNFMIEKGRVP 363
++V + + AK G F ++ N L+ + S D ++ A+ N M+E +P
Sbjct: 145 VLVSKLVDSAKSFG-------FEVNSRAFNYLLNAYSK-DRQTDHAVDIVNQMLELDVIP 196
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
++ L +RN E E+Y + A D + +++ + EA V+
Sbjct: 197 FFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVL 256
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG-CSGNLKTYNILISKFSE 482
+G +PD Y+ ++ACC+ L A L +M C + +TY +I +
Sbjct: 257 SRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVK 316
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
G ++ A+RL ML G++ + TSL+ G C+ +L +A +F+K
Sbjct: 317 QGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDK 364
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 117/263 (44%), Gaps = 28/263 (10%)
Query: 299 YREFILGLIVERR-ICEAKELGEVIVSGKFTID-DDVLNALI--GSVSSIDPRSAIVFFN 354
Y L +V+R + EAKEL +V+ +D D+V L+ S+ P A+ +
Sbjct: 200 YVNRTLSALVQRNSLTEAKELYSRMVA--IGVDGDNVTTQLLMRASLREEKPAEALEVLS 257
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM----------ESYN 404
IE+G P S L +L+ C + + AN +M E+Y
Sbjct: 258 RAIERGAEPD-SLLYSLAVQAC--------CKTLDLAMANSLLREMKEKKLCVPSQETYT 308
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
++ G + +A + EM G+ +V SL+ C+ + L A L+D+M
Sbjct: 309 SVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKE 368
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G S N T+++LI F + GE+E AL + M G+ P ++++G + + A
Sbjct: 369 GPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEA 428
Query: 525 FEVFNKSVN---HDVMLARSILS 544
++F++S +V + +ILS
Sbjct: 429 LKLFDESFETGLANVFVCNTILS 451
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/183 (18%), Positives = 81/183 (44%), Gaps = 2/183 (1%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y S++ L + +++ + ++K + LD Y +I + N + A ++F+E
Sbjct: 620 ITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSE 679
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + I NSL++ + G + AL ++ +M G+ + I ++
Sbjct: 680 LLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGN 739
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
L + E++ ++ +I +I++G K + + K+ +E++ P+ + Y
Sbjct: 740 LILASELYTEMQAV--GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIY 797
Query: 265 RIV 267
V
Sbjct: 798 NAV 800
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 164/365 (44%), Gaps = 3/365 (0%)
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLII 233
+++ D + I + + I C + +GQ + +LDE+ R V +++
Sbjct: 1 MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSR--GCKPDVVTYNVLV 58
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
+G CK R++EA K L+ + +P+ I + I+ G + E +L + + G +
Sbjct: 59 NGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCS 118
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVF 352
P + I L + + A ++ E + + T + N L+ G AI +
Sbjct: 119 PSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQY 178
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
M+ +G P + T + + LCK K D VE+ LS+ + +YN ++ L
Sbjct: 179 LEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSK 238
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G+ +A ++ EM+ KGL PDV Y+SL+ RE + A K + + G N T
Sbjct: 239 VGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFT 298
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YN ++ + + + A+ M+ KG P +YT L+EG+ E + A E+ N+
Sbjct: 299 YNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELC 358
Query: 533 NHDVM 537
+ V+
Sbjct: 359 SRGVV 363
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 148/337 (43%), Gaps = 34/337 (10%)
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
R+ E + ++I C V +A K+LDE+ R CKPD + Y ++ G
Sbjct: 6 RQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEG 65
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ E L G P + I+ R +C +G++ + +L
Sbjct: 66 RLDEAIKFLNSMPSYGSQPNVITHN------IILRSMCS---------TGRWMDAEKLLT 110
Query: 336 ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
M+ KG P++ T + L LC++ +++ + + +
Sbjct: 111 E-------------------MVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHG 151
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ SYN ++ C ++ A ++ M +G PD+ YN+++ A C++ + A
Sbjct: 152 CTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAV 211
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L +Q+ + GCS L TYN +I S+VG+ + A+ L H M KG+ PD TY+SL+ GL
Sbjct: 212 ELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGL 271
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+E ++ A + F+ V ++ M LC+
Sbjct: 272 SREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCK 308
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 106/255 (41%), Gaps = 11/255 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L G + A+ + ++M G +++ + + FC+ K+ + + L+ +
Sbjct: 125 NILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVS 184
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R V ++ CK +V+ A ++L++L + C P I Y V + +G
Sbjct: 185 R--GCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKT 242
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-----GEVIVSGKFTIDDD 332
+ +L + R G+ P Y I GL E ++ EA + G + FT +
Sbjct: 243 DQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYN-- 300
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
+ + G + AI F +MI KG PT + + L + + + E +E+ L
Sbjct: 301 --SIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELC 358
Query: 393 ANDYFTDMESYNVMV 407
+ + V+V
Sbjct: 359 SRGVVKKSSAEQVVV 373
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 95/234 (40%), Gaps = 14/234 (5%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQI 100
+R SPS+V I L L + + P +P LSY+ +L +++
Sbjct: 113 VRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKM 172
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--N 158
+ L+ + D Y ++ +L + A + N+ + + P + N
Sbjct: 173 DRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQ--LSSKGCSPVLITYN 230
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK- 217
+++ L+ G D A+++ EM +G++ I + I K+ + + +V
Sbjct: 231 TVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGF 290
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+ N+ S I+ G CK ++ + A L + + CKP ++Y I+ E
Sbjct: 291 GVKPNAFTYNS-----IMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIE 339
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 178/397 (44%), Gaps = 6/397 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N +L L ++ AL++F+EM V + + + I C KL L + D++
Sbjct: 129 NCILTCLGKKRRVEEALRIFEEMKRDAVP-NVPTYNILIDMLCREGKLNAALEIRDDM-- 185
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E + + +V+ V ++I CK +++EEA + + + + C P+ + + + + G
Sbjct: 186 -ERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGR 244
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
V + + +K G P Y I R + ++ + +V + D ++N
Sbjct: 245 VDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINT 304
Query: 337 LIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
+ V + + F + G +P + S L L K ++E E++ +
Sbjct: 305 YMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG 364
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D +YN ++ C SG++ +AY +++EMK KG P V Y S+++ + D L A
Sbjct: 365 CVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAY 424
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L+++ ++G N+ Y+ LI F +VG I+ A + +++KG+ P+ T+ LL+ L
Sbjct: 425 MLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 484
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ + A F + + S + LCR
Sbjct: 485 VKAEEINEALICFQSMKDLKCPPNQITYSILINGLCR 521
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 117/566 (20%), Positives = 236/566 (41%), Gaps = 50/566 (8%)
Query: 10 ATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPS--LVARV----INPYLLTH 63
++ IS +++ ++R R+ ++ QT+ + R + S L+ +V + P++L
Sbjct: 9 SSNISIELVANCVKSRKLREAFDII-QTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCK 67
Query: 64 HSL---ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS 120
+ A+ F Q +Y++++ + + + +L++ K
Sbjct: 68 ANRLDEAVELFEQLEQNRKVP-CAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVI 126
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFD 178
Y I+ L + + ++A +F E+K D P + N L+ +L +G ++ AL++ D
Sbjct: 127 AYNCILTCLGKKRRVEEALRIFEEMK---RDAVPNVPTYNILIDMLCREGKLNAALEIRD 183
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR-------------------- 218
+M G+ + + + I + C+ KL + S+ + + +
Sbjct: 184 DMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 243
Query: 219 -------------ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ + G+++ +I F K R E+ K+ E+ C PD
Sbjct: 244 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLIN 303
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ G + + ++ G P Y I GL+ E EL +
Sbjct: 304 TYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQ 363
Query: 326 KFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+D NA+I G S A M KG PT+ T ++ L K ++ DE
Sbjct: 364 GCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEA 423
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+++ +N ++ Y+ ++ GR+ EAY +++E+ +KGL P+V +N L++A
Sbjct: 424 YMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 483
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
+ + + A + M C N TY+ILI+ V + A + M + G+ P+
Sbjct: 484 LVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPN 543
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNK 530
TYT+++ GL + N+ A +F++
Sbjct: 544 TITYTTMISGLAKAGNILEASGLFSR 569
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 170/396 (42%), Gaps = 51/396 (12%)
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
+F W C+ +L + + + +++ +N + + +I G+ + +EA+ +L+ +
Sbjct: 60 LFPWVLCKANRLDEAVELFEQLE--QNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQK 117
Query: 254 IRECKPDFIAY----------RIVAEEFKLMGSVFEREVV------------LKKKRKLG 291
+ P IAY R V E ++ + +R+ V L ++ KL
Sbjct: 118 AKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLN 176
Query: 292 VAPRTNDYRE--------FILGLIVERRICEAKELGEV--IVSGKFTIDDDVL--NAL-- 337
A D E + ++++ R+C+A++L E I G +DD V NA+
Sbjct: 177 AALEIRDDMERAGLFPNVLTVNIMID-RLCKAQKLEEACSIFEG---MDDKVCTPNAVTF 232
Query: 338 ------IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
+G +D A + M++ G VP ++L ++ K + ++ ++YK +
Sbjct: 233 SSLIDGLGKCGRVD--DAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEM 290
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
D+ N + + +G + + +E+ G PD Y+ L+ + L
Sbjct: 291 VHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLA 350
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
+L+ M GC + YN +I F + G++ A +L M KG P TY S+
Sbjct: 351 NETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSV 410
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
++GL + L A+ +F ++ ++ + L + S+ +
Sbjct: 411 IDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLI 446
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/444 (20%), Positives = 190/444 (42%), Gaps = 9/444 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
L+ + ++ L ++++ S+ + + T ++ + +I L + A+S++ +
Sbjct: 195 LTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEK 254
Query: 145 VKFNCEDI-GPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ +C + G + SL+ G ++ K++ EM H G ++ +
Sbjct: 255 M-LDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAG 313
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ + ++ E+ + I + ++IHG K E +++ ++ + C D A
Sbjct: 314 ETEKGRALFREINA--HGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHA 371
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y V + F G V + +L++ + G P Y I GL R+ EA L E
Sbjct: 372 YNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 431
Query: 324 SGKFTIDDDVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
S ++ V ++LI G V ID A + +++KG P + T + L L K +
Sbjct: 432 SNGIKLNVVVYSSLIDGFGKVGRID--EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 489
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+E + ++ + + +Y+++++ LC + +A+ QEM++ GL P+ Y +
Sbjct: 490 INEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTT 549
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
++ + + A L+ + A+G + +YN +I S + A LF KG
Sbjct: 550 MISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKG 609
Query: 501 VAPDATTYTSLLEGLCQETNLQAA 524
T LL+ L + L+ A
Sbjct: 610 CNIHTKTCVVLLDALHKAECLEQA 633
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 159/355 (44%), Gaps = 3/355 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ + + + +F EM RG++++ + I FC + S+ + K
Sbjct: 44 NRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLK 103
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R VI +I G C+ + E A +L E+ + C PD + + + G +
Sbjct: 104 R--GFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKI 161
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ + G+ P Y FI G +I EA EL + + + N L
Sbjct: 162 DKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTL 221
Query: 338 IGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I ++ ++ PR A V F M G P + S L CK+ DE++ +++ +
Sbjct: 222 IKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLV 281
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ Y ++++ +C S ++++A V+ + +GL PDV Y +L++ CRE + A +
Sbjct: 282 KPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALR 341
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
L+ +M GC +YN+L+ + + ++L H M ++G DA T T L
Sbjct: 342 LFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTRTFL 396
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 156/363 (42%), Gaps = 36/363 (9%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G +D+AL F+ M R + I F + K V+S+ E+ R N
Sbjct: 19 GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFR-GIKYNVCT 77
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+++LI + FC V+ F V + R KPD + + + + +G +LK+
Sbjct: 78 LSILI-NCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEM 136
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR 347
+G P + G + +I + +++
Sbjct: 137 GLVGCVPDVVTCNSLMRGYCSQGKIDKVRKI----------------------------- 167
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
F+ M+ KG P + + S CK K DE +E++ +S + +YN ++
Sbjct: 168 -----FHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLI 222
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
LC + R R+A + ++M GL PD+ Y++L++ C++ L L+ +M
Sbjct: 223 KALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVK 282
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
+L Y I+I+ +++ A + ++ +G+ PD TYT+L++GLC+E ++ A +
Sbjct: 283 PDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRL 342
Query: 528 FNK 530
F K
Sbjct: 343 FRK 345
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 102/193 (52%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G VP + T ++L + C + K D++ +++ ++ + D+ SY++ ++ C ++ EA
Sbjct: 140 GCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEA 199
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ EM +G+ P+ YN+L++A C+ R A+ L+ +M A G S ++ Y+ L+
Sbjct: 200 MELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDG 259
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
F + G ++ L LF M + V PD YT ++ G+C+ ++ A EV ++ + +
Sbjct: 260 FCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPD 319
Query: 540 RSILSTFMISLCR 552
+ + LCR
Sbjct: 320 VHTYTALVDGLCR 332
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 101/205 (49%)
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A+ FN M+++ P + + L ++ + K + +V ++K + ++ + ++++
Sbjct: 23 DALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILI 82
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+ C + + V + ++G PDV + +L++ CR A L +M GC
Sbjct: 83 NCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCV 142
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
++ T N L+ + G+I+ ++FH M+ KG+ PD +Y+ + G C+ + A E+
Sbjct: 143 PDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMEL 202
Query: 528 FNKSVNHDVMLARSILSTFMISLCR 552
F++ + V+ +T + +LC+
Sbjct: 203 FDEMSHRGVVPNAVTYNTLIKALCQ 227
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F +++G P + + L +C+ K++ + K + D+ + N ++ C+
Sbjct: 98 FGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCS 157
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G++ + + M KGL PDV Y+ + C+ + + A +L+D+M G N T
Sbjct: 158 QGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVT 217
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YN LI + A LF M G++PD Y++LL+G C++ NL +F +
Sbjct: 218 YNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQ 277
Query: 533 NHDVMLARSILSTFMISLCR 552
V + + + +CR
Sbjct: 278 RRLVKPDLVVYTIIINGMCR 297
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 116/256 (45%), Gaps = 5/256 (1%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CNSL+ S G ID K+F M +G++ + +FI +C+ K+ + + + DE+
Sbjct: 148 CNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMS 207
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
R ++ +V +I C+ R +A + ++ PD +AY + + F G+
Sbjct: 208 HR--GVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGN 265
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE-LGEVIVSGKFTIDDDVLN 335
+ E V+ ++ ++ V P Y I G+ R++ +AKE L +IV G D
Sbjct: 266 LDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEG-LKPDVHTYT 324
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
AL+ G A+ F M E G +P + + L + + N + +V++ ++
Sbjct: 325 ALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADR 384
Query: 395 DYFTDMESYNVMVSFL 410
++ D + + FL
Sbjct: 385 GFYADAVTRTFLKDFL 400
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 165/372 (44%), Gaps = 3/372 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ G +D+A++MF EM +G E +G + + ++ + S D + +
Sbjct: 104 NVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLE 163
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R + L++ F K +++ A + E++ R +P + Y I+ + G V
Sbjct: 164 R--GLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRV 221
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ K G +P + Y + GL R+ EA ++ +V +D N+L
Sbjct: 222 GAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSL 281
Query: 338 IGSVSSIDPRSAI-VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ +++ + M KG P + + + L K NK D EV+ + +
Sbjct: 282 LATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGC 341
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ SYN+++ G +A +++EM G P+ YNSL+ + + A
Sbjct: 342 KPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFA 401
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ ++M +GC ++ TYN L+ + GE + A RLF M +KGV PD +Y ++GL
Sbjct: 402 VLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLA 461
Query: 517 QETNLQAAFEVF 528
+ L A +F
Sbjct: 462 FDDRLDEALVLF 473
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 202/485 (41%), Gaps = 15/485 (3%)
Query: 47 LSPSLVARVINPYLLTHHSL-ALGFFNWASQQPNFTHSPLSYHSILKSLSL---SRQINA 102
L P+ + ++I Y + S A FN Q +F SP + H+ K + + S +
Sbjct: 28 LRPNTLVKLITAYGRGNKSGDAFDLFN---QAESFACSP-TVHAFTKLIDILVNSGEFER 83
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLA 162
+ V K++ LD Y +I + A +F E+K + L+
Sbjct: 84 AELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVN 143
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
L G + A FD M RG+ + + + + F + +L L + E+++R
Sbjct: 144 ALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRG--- 200
Query: 223 INGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
SV+ +++ C RV A K+ ++ C PD Y + G V E
Sbjct: 201 FQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAH 260
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
V ++ GVA +Y + L + +L + + F D N ++ ++
Sbjct: 261 KVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDAL 320
Query: 342 SSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ P +A F M+E G P L + + L + + + + ++ + + + +
Sbjct: 321 GKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPET 380
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
++YN ++ +L T G++ EA+ V++EM+ G PDV YN LM+ + + A +L+ Q
Sbjct: 381 KTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQ 440
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL--CQE 518
M G + +Y + I + ++ AL LF +M G D Y L+ +
Sbjct: 441 MKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGD 500
Query: 519 TNLQA 523
T L+A
Sbjct: 501 TELEA 505
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 171/411 (41%), Gaps = 3/411 (0%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y+ +++ S Q+++ + +++K+ D Y F++ +L + Q+A S F+
Sbjct: 101 FAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDA 160
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ N L+ G +D AL +F EM RG + S + + + + C +
Sbjct: 161 MLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGR 220
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+G + ++ + S +++G K RVEEA KV E+ R D + Y
Sbjct: 221 VGAARKLFHKMTG--DGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNY 278
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ G++ ++K+ + G P + + L + A+E+ +V
Sbjct: 279 NSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVE 338
Query: 325 GKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
D N LI S + D A M+E G +P T ++L L + DE
Sbjct: 339 SGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDE 398
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
V + + D+ +YN ++ L G + A + Q+MK KG++PD Y ++
Sbjct: 399 AFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRID 458
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+D L A L+ M A GC + Y ILI G+ E +L H
Sbjct: 459 GLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKH 509
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 191/450 (42%), Gaps = 21/450 (4%)
Query: 100 INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK-FNCEDIGPEI-- 156
++ ++++LK++ L + +I + +G + AF +FN+ + F C P +
Sbjct: 11 LDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACS---PTVHA 67
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
L+ +L + G + A ++ ++ +G + + V I F + +L + M E++
Sbjct: 68 FTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMK 127
Query: 217 KRENSMINGS----VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
I GS +++ K RV+EA D + R P+ Y ++ + F+
Sbjct: 128 ------IKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFR 181
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
+G + + + ++ G P Y + L R+ A++L + + D
Sbjct: 182 KVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSY 241
Query: 333 VLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
+ L+ G S A F M+++G L ++L L K D + ++ K +
Sbjct: 242 TYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEM 301
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
S + D S+N ++ L + + A V M G PD+ YN L+++ R
Sbjct: 302 SRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDA 361
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A+++ ++M +G KTYN LI + G+++ A + M G PD TY L
Sbjct: 362 AQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRL 421
Query: 512 LEGLCQETNLQAAFEVF----NKSVNHDVM 537
++ L + Q A +F +K V D +
Sbjct: 422 MDMLGKRGENQRAARLFQQMKDKGVEPDTL 451
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 165/416 (39%), Gaps = 56/416 (13%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
+L VLAS G +D + EM G I + K G + ++
Sbjct: 1 MLVVLASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAE--- 57
Query: 220 NSMINGSVIAVLIIHGFCK-------GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
S +H F K E A V +L + C+ D AY ++ F
Sbjct: 58 ------SFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFG 111
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
G + + ++ + G P Y + L R+ EA+ + ++ T +
Sbjct: 112 RSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIP 171
Query: 333 VLNALIGS---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
N L+ + V +D A+ F M +G P++ T + L LC + +++
Sbjct: 172 TYNLLMDAFRKVGQLD--MALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFH 229
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGV--------------------------- 422
++ + D +Y+ +V+ L SGR+ EA+ V
Sbjct: 230 KMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAG 289
Query: 423 --------IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
++EM RKG PD +N++M+A + + A++++ +M SGC +L +YN
Sbjct: 290 NMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYN 349
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
ILI ++ G+ A ++ M+E G P+ TY SL+ L + + AF V +
Sbjct: 350 ILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEE 405
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 180/431 (41%), Gaps = 9/431 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+++S++ + Q++ + ++ + D Y +I L + +A +F E+
Sbjct: 12 TFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEM 71
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + +L+ L + + L M M G ST + + C K
Sbjct: 72 ----DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKA 127
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ ML E+ E + V +I+ +CK R+ +A +VL+ +++R CKP+ Y
Sbjct: 128 KEAEEMLQEMF--EKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYN 185
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + F G V + +L K R GV P Y I G ++ I A L ++
Sbjct: 186 ALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGD 245
Query: 326 KFTIDDDVLNALIGSVSSIDPRS--AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
D NALI ++ D R+ A F+ + +G P T ++L LCK K+D
Sbjct: 246 GLIADQYTYNALINALCK-DGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADI 304
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ + + + D +Y+ + LC +E I EM +K + P Y ++
Sbjct: 305 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIH 364
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+E + W +M +SGC+ ++ TY + + G + A + M + GV
Sbjct: 365 KLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTV 424
Query: 504 DATTYTSLLEG 514
D Y +L++G
Sbjct: 425 DTMAYNTLMDG 435
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 154/395 (38%), Gaps = 75/395 (18%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NSL+ +D A +FD+M RG + + I CE ++ + + + E+ +
Sbjct: 14 NSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ 73
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ M ++ G C +R EE
Sbjct: 74 PDMHMYAA------LVKGLCNAERGEEGL------------------------------- 96
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
++L++ ++LG P T Y + ER+ EA+E+
Sbjct: 97 ----LMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEM------------------- 133
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
M EKG P + T + + CK + + + V +++
Sbjct: 134 ---------------LQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCK 178
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
++ +YN +V C G++ +A ++ +M+ G++PD YN L+ C + + A +L
Sbjct: 179 PNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRL 238
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
M G + TYN LI+ + G + A LF ++ +G+ P+A T+ SL+ GLC+
Sbjct: 239 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 298
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A++ K V+ S+F+ LC+
Sbjct: 299 SGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK 333
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 108/535 (20%), Positives = 210/535 (39%), Gaps = 45/535 (8%)
Query: 10 ATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVA--RVINPYL----LTH 63
+TR A++ R R A++ +L++ + L+P +V VIN Y ++
Sbjct: 110 STRAYAAVVDFRCRERKAKEAEEMLQEMFEK-----GLAPCVVTCTAVINAYCKEGRMSD 164
Query: 64 HSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
L +PN +Y+++++ +++ ++L +++ + D+ Y
Sbjct: 165 ALRVLELMKLRGCKPNV----WTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYN 220
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR 183
+I + + AF + ++ + N+L+ L DG D A +FD + R
Sbjct: 221 LLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETR 280
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G++ + + F I C++ K L+++ + + I H CK K +
Sbjct: 281 GIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVS-AGCTPDTYTYSSFIEH-LCKMKGSQ 338
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR-----KLGVAPRTND 298
E + E+ ++ KP + Y IV + + ER L + G P
Sbjct: 339 EGLSFIGEMLQKDVKPSTVNYTIVIHKL-----LKERNYGLVARTWGEMVSSGCNPDVVT 393
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMI 357
Y + +E R+ EA+ + + T+D N L+ +SI A+ M
Sbjct: 394 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 453
Query: 358 EKGRVPTLSTLSNLSKNLCKRN--------------KSDELVEVY---KVLSANDYFTDM 400
VP T L ++L + K+ EL +V+ V+ N++ +
Sbjct: 454 SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNS 513
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+Y+ ++ GR EA ++ MK + + Y +L+ C+ A L
Sbjct: 514 GTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCS 573
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
M G L +Y L+S G+ + A +F N K +PD + +++GL
Sbjct: 574 MIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGL 628
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 35/217 (16%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M+ G P T ++L C+ N+ D +++ + + D+ SY ++ LC +GR
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 416 LREA---YG----------------------------VIQEMKRKGLDPDVSFYNSLMEA 444
+ EA +G +++ MK G P Y ++++
Sbjct: 61 IDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
CRE + A+++ +MF G + + T +I+ + + G + ALR+ M +G P+
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNK----SVNHDVM 537
TY +L++G C E + A + NK VN D +
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAV 217
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 93/493 (18%), Positives = 185/493 (37%), Gaps = 66/493 (13%)
Query: 54 RVINPYLLTHHSLALGFFNWASQQPNFT-----------HSPLSYHSILKSLSLSRQINA 102
R P + T+++L GF N T ++Y+ +++ + I +
Sbjct: 175 RGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIES 234
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLA 162
+L+ ++ + + D Y +I +L + T +A S+F+ ++ NSL+
Sbjct: 235 AFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLIN 294
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
L G D A K ++M G T + FI C+ + LS + E+ +++ +
Sbjct: 295 GLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD--V 352
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+V ++IH K + + E+ C PD + Y + + G + E E
Sbjct: 353 KPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAEN 412
Query: 283 VLKKKRKLGVAPRTNDYREFILGLI----VERRICEAKELGEVI-VSGKFT--------- 328
VL + K GV T Y + G + + K++ V V +FT
Sbjct: 413 VLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLV 472
Query: 329 ---IDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ +DVL V +I+ F+ M + +P T S++ + + +++E
Sbjct: 473 RMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEA 532
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+ ++ + + + Y +V+ C S R +A+ ++ M + G P + Y L+
Sbjct: 533 TSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSG 592
Query: 445 CCREDLLRPAKKL---------------W----DQMFASG----------------CSGN 469
E AK++ W D + G C +
Sbjct: 593 LICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPS 652
Query: 470 LKTYNILISKFSE 482
+TY +L + +
Sbjct: 653 HQTYAMLTEELPD 665
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%)
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M SG + T+N LI + +++ A LF M +G A D +Y +L+EGLC+
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 521 LQAAFEVFNKSVNHDVMLARSIL 543
+ A E+F + D+ + +++
Sbjct: 61 IDEAVELFGEMDQPDMHMYAALV 83
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 200/461 (43%), Gaps = 9/461 (1%)
Query: 71 FNWASQQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPS 128
+W ++ F P +SY++IL +L R + +L +K ++ + Y ++
Sbjct: 233 LDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCG 292
Query: 129 LIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVE 186
+ ++A V + N ++ P + N L+ +DG ID A ++ DEM V
Sbjct: 293 YCRLGLLKEATKVIEIMTRN--NLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVL 350
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
+ + I + +V S+++E+ K+ + +V +I+ CK + EA
Sbjct: 351 PDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKK--GVKCNAVTYNIILKWMCKKGNMTEAT 408
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
LD++ PD + Y + + G + + ++ + G+ T + L
Sbjct: 409 TTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCL 468
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTL 365
VE+++ EA L + +D+ LI G A+ ++ M E+ +P+
Sbjct: 469 CVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPST 528
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
T +++ LC+ K D+ ++ + N D +YN+++ C G + +A+ E
Sbjct: 529 ITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNE 588
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M PDV N L+ CRE +L A KL++ + + G ++ TYN +IS + G+
Sbjct: 589 MIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGK 648
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
E A L M K + PD TY ++ L ++ A E
Sbjct: 649 FENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEE 689
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 124/538 (23%), Positives = 229/538 (42%), Gaps = 31/538 (5%)
Query: 35 EQTLHQLGL---RDSLSPS--LVARVINPYL-LTHHSLALGFFNWASQQPNFTHSPLSYH 88
+ LH+L L RD PS L+ I Y+ + LA FN ++ N+ + L+ +
Sbjct: 121 QHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFN-KMKRLNYRPNLLTCN 179
Query: 89 SILKSLS---------LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
+++ SL L+RQ+ DS+ V N + + +Y + + S ++ A
Sbjct: 180 TLMNSLVRYPSSSSILLARQV-LKDSIKLGVVPNTNSFNILIYGYCLESKVK-----DAL 233
Query: 140 SVFNEV-KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
N++ +F C P+ N++L L + A + +M +G+ + + + +
Sbjct: 234 DWVNKMSEFGCV---PDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLV 290
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
+C L + ++ E+ R N+++ ++++GFC +++EAF++ DE+
Sbjct: 291 CGYCRLGLLKEATKVI-EIMTR-NNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMN 348
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
PD + Y + + E ++++ K GV Y + + + + EA
Sbjct: 349 VLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEAT 408
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ + + D N LIG+ A + M KG TL+ + L
Sbjct: 409 TTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCL 468
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C K DE + S Y D SY +++ + A + EMK + + P
Sbjct: 469 CVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPST 528
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YNS++ C+ + A ++M +G + TYNI+I F G +E A + +
Sbjct: 529 ITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNE 588
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
M+E PD T LL GLC+E L+ A ++FN V+ + +T + SLC+
Sbjct: 589 MIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKE 646
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/474 (22%), Positives = 206/474 (43%), Gaps = 20/474 (4%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A+ FF++ + F + I + ++R AI S+ +++++ +I L+ + +I
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAI-SLYRKMEIRRIPLNIYSFNILI 148
Query: 127 PSLIQGKNTQKAFSVFNE----------VKFNCEDIGPEICNSLLAVLASDGYIDNALKM 176
+ S F + V FN G + + + LA GY+ +
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSL 208
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHG 235
FD+M G+ I F I C G+VL V K ++ V+ I++G
Sbjct: 209 FDQMVEIGLTPVVITFNTLINGLCLE---GRVLEAAALVNKMVGKGLHIDVVTYGTIVNG 265
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
CK + A +L ++ KPD + Y + + G + + + + + G+AP
Sbjct: 266 MCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 325
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFN 354
Y I G R +A+ L ++ + D NALI SV A +
Sbjct: 326 VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCD 385
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+ + P T +++ CK N+ D+ ++ ++++ D T +N ++ C +
Sbjct: 386 EMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVT----FNTIIDVYCRAK 441
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
R+ E +++E+ R+GL + + YN+L+ C D L A+ L+ +M + G + T N
Sbjct: 442 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 501
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
IL+ F E ++E AL LF + + D Y ++ G+C+ + + A+++F
Sbjct: 502 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 555
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 207/474 (43%), Gaps = 21/474 (4%)
Query: 38 LHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLS 97
LH L L D +S +L + Y++ SL F+ + T +++++++ L L
Sbjct: 183 LHGLCLEDRISEALA---LFGYMVETGSL----FDQMVE-IGLTPVVITFNTLINGLCLE 234
Query: 98 RQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE-- 155
++ +++ ++ + +D Y I+ + + +T+ A ++ + K I P+
Sbjct: 235 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS--KMEETHIKPDVV 292
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
I ++++ L DG+ +A +F EM +G+ + + I FC + +L ++
Sbjct: 293 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 352
Query: 216 RKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+RE IN V+ +I K ++ EA K+ DE+ R PD + Y + F
Sbjct: 353 IERE---INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF--- 406
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
R K L +P + I +R+ E +L I +
Sbjct: 407 -CKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 465
Query: 335 NALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N LI +D +A F MI G P T + L C+ K +E +E+++V+
Sbjct: 466 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 525
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ D +YN+++ +C ++ EA+ + + G++PDV YN ++ C + +
Sbjct: 526 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 585
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
A L+ +M +G + TYN LI + GEI+ ++ L M G + DA T
Sbjct: 586 ANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 639
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 132/313 (42%), Gaps = 32/313 (10%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I F + R + A + ++ IR + ++ I+ + F + K KLG
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 292 VAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
P + + GL +E RI EA L G ++ +G
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSL----------------------- 208
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
F+ M+E G P + T + L LC + E + + D+ +Y +V+ +
Sbjct: 209 --FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C G + A ++ +M+ + PDV Y+++++ C++ A+ L+ +M G + N+
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 326
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TYN +I F G A RL +M+E+ + PD T+ +L+ +E L A ++
Sbjct: 327 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC-- 384
Query: 531 SVNHDVMLARSIL 543
D ML R I
Sbjct: 385 ----DEMLHRCIF 393
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 80/214 (37%), Gaps = 45/214 (21%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI FF++M+ T + + + N+ D + +Y+ + ++ S+N+++
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C +L + ++ + G PDV +N+L+ C ED
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED------------------- 190
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEK----------GVAPDATTYTSLLEGLCQE 518
I AL LF M+E G+ P T+ +L+ GLC E
Sbjct: 191 ----------------RISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLE 234
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ A + NK V + + T + +C+
Sbjct: 235 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCK 268
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 196/433 (45%), Gaps = 17/433 (3%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEICNSLLAV--LASDGYIDNALKM 176
Y ++ +L + +T+K ++ E+K IG P I + + L ID+A +
Sbjct: 237 TYSALMVALGRRGDTRKIMNLLEEMK----SIGLRPNIYTYTICIRALGRARRIDDAWGI 292
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
F EM G I + V I C KL + + V+ R +S V + ++ F
Sbjct: 293 FKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELY--VKMRASSHSPDRVTYITLMDKF 350
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
K +E + +E+ + PD + Y I+ E G V +L G+ P
Sbjct: 351 GKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNL 410
Query: 297 NDYREFILGLIVERRICEAKELGEVIVS--GKFTIDDDVLNALIGSVSSIDPRSAIVFFN 354
+ Y I GL+ RR+ EA EL E + S K T VL S DP AI F
Sbjct: 411 HTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSG-DPAKAIDTFE 469
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M ++G +P+++ + L + + E +++ L D +YN+++ +G
Sbjct: 470 TMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAG 529
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
++ +A ++ EM KG +PDV NSL+ + + A K++ ++ + + TYN
Sbjct: 530 QIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYN 589
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK---- 530
IL++ + G+I AL LF +M E G P+ T+ SLL+ L + + A ++F +
Sbjct: 590 ILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMM 649
Query: 531 SVNHDVMLARSIL 543
+ N DV+ +I+
Sbjct: 650 NCNPDVLTYNTII 662
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/489 (22%), Positives = 217/489 (44%), Gaps = 55/489 (11%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+ ++K S + QI+ +L ++ D + +I +L + A+ +F
Sbjct: 516 VTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGR 575
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+K N + + P + N LL L +G I AL++F M+ G +TI F + +N
Sbjct: 576 LK-NLK-LAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKN 633
Query: 203 AKLGQVLSMLDEVRKRENSMINGS---VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ L M + +M+N + + II+G + R++ AF +++ + P
Sbjct: 634 DAVDLALKMFCRM-----TMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSP 687
Query: 260 DFIAYRIVAEEFKLMGSVFER-EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
D++ + G V + +VV++ + + + + E + ++ E I EA
Sbjct: 688 DYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISF 747
Query: 319 GEVIVSGKFTIDDDVLNALIGSV----SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
E++V DD V+ LI + ++D ++ VF F G PTL + + L
Sbjct: 748 AEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQN--VFDKFTKNLGIHPTLESYNCLMDG 805
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
L N +++ +E+++ + + + +YN+++ S R+ + Y + EM+ +G +P+
Sbjct: 806 LLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPN 865
Query: 435 VSFYNSLMEACCREDLL-----------------------------------RPAKKLWD 459
+N ++ A + + L A K+++
Sbjct: 866 AITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFE 925
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M GC N YNILI+ F + GEI+ A LF M+++G+ PD +YT L+E LC
Sbjct: 926 EMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITG 985
Query: 520 NLQAAFEVF 528
+ A + F
Sbjct: 986 RIDEAVQYF 994
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 110/206 (53%), Gaps = 9/206 (4%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ + MI +G P++ T S L L +R + +++ + + + + ++ +Y + +
Sbjct: 219 ALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIR 278
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L + R+ +A+G+ +EM +G PDV Y L++A C L AK+L+ +M AS S
Sbjct: 279 ALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSP 338
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ TY L+ KF +VG++E R ++ M G APD TYT L+E LC+ ++ AF++
Sbjct: 339 DRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDML 398
Query: 529 NKSVNHDVMLARSI---LSTFMISLC 551
DVM + I L T+ +C
Sbjct: 399 ------DVMTTKGIFPNLHTYNTMIC 418
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 168/421 (39%), Gaps = 76/421 (18%)
Query: 113 NKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGP--EICNSLLAVLASDGYI 170
N + D V +I L + K A +VF++ N I P E N L+ L +
Sbjct: 754 NSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNL-GIHPTLESYNCLMDGLLGSNFT 812
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
+ AL++F++M G + + + +LD
Sbjct: 813 EKALELFEDMKSAGTHPNNFTYNL----------------LLDA---------------- 840
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
HG K KR+ + + + E+R R C+P+ I + I+
Sbjct: 841 ---HG--KSKRINKLYDLYSEMRSRGCEPNAITHNII----------------------- 872
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
I L+ + +A +L ++SG F+ LI G + + A
Sbjct: 873 ------------ISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQA 920
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ F M++ G P + L K + D E++K + D++SY ++V
Sbjct: 921 MKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVEC 980
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC +GR+ EA +E+K GLDPD YN ++ + L A L+ +M G S +
Sbjct: 981 LCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPD 1040
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
L TYN LI G+++ A++++ + G+ P TY +L+ G N AF VF
Sbjct: 1041 LYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFK 1100
Query: 530 K 530
K
Sbjct: 1101 K 1101
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/489 (20%), Positives = 196/489 (40%), Gaps = 45/489 (9%)
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
+S++ +L + +++A + ++K K+ Y ++ L + KA +F +
Sbjct: 554 NSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTE 613
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
+ NSLL L+ + +D ALKMF M+ + + I+ ++
Sbjct: 614 SGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDY 673
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKV------------------- 248
+++K + V +I G + RVE+A KV
Sbjct: 674 AFWFFHQMKK---FLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGE 730
Query: 249 -----LDELRIRE-------------CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
L E I E C+ D + ++ K ++ + V K + L
Sbjct: 731 LMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNL 790
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---GSVSSIDPR 347
G+ P Y + GL+ +A EL E + S ++ N L+ G I+
Sbjct: 791 GIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKL 850
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
+ ++ M +G P T + + L K N ++ +++Y L + D+ +Y ++
Sbjct: 851 YDL--YSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLI 908
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
L +GR +A + +EM G P+ YN L+ + + A +L+ +M G
Sbjct: 909 DGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIR 968
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
+LK+Y IL+ G I+ A++ F + G+ PD +Y ++ GL + L A +
Sbjct: 969 PDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSL 1028
Query: 528 FNKSVNHDV 536
F++ N +
Sbjct: 1029 FSEMKNRGI 1037
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 159/387 (41%), Gaps = 39/387 (10%)
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSL 160
N D K + ++ TL+S Y ++ L+ T+KA +F ++K N L
Sbjct: 781 NVFDKFTKNLGIHP-TLES--YNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLL 837
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
L I+ ++ EM RG E + I + I ++ L + L + E+ +
Sbjct: 838 LDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDF 897
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
S + +I G K R E+A K+ +E+ C P+ + Y I+ F G +
Sbjct: 898 SPTPCTYGP--LIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFA 955
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+ KK K G+ P Y + L + RI EA + E +
Sbjct: 956 CELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEEL-----------------K 998
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
++ +DP + V +NF+I L K + DE + ++ + D+
Sbjct: 999 LTGLDPDT--VSYNFIIN---------------GLGKSRRLDEALSLFSEMKNRGISPDL 1041
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+YN ++ L +G++ A + +E++ GL+P V YN+L+ A ++ +
Sbjct: 1042 YTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKK 1101
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIE 487
M GCS N +T+ L +K+ G +
Sbjct: 1102 MMVVGCSPNTETFAQLPNKYPRAGLVH 1128
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 96/453 (21%), Positives = 175/453 (38%), Gaps = 80/453 (17%)
Query: 155 EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ---VLSM 211
+ CN +L +L I++ + +FD M + + + + +G+ L
Sbjct: 132 DACNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRK 191
Query: 212 LDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
+ EV N+ +I L++ GFC EA KV + KP Y +
Sbjct: 192 MTEVGFILNAYSYNGLIH-LLLPGFC-----NEALKVYKRMISEGMKPSMKTYSALMVAL 245
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA----KELGE------- 320
G + +L++ + +G+ P Y I L RRI +A KE+ +
Sbjct: 246 GRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDV 305
Query: 321 ---------VIVSGKFTIDDDVLNALIGSVSSIDPRSAIV----------------FFNF 355
+ +GK ++ + S S D + I F+N
Sbjct: 306 ITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNE 365
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M G P + T + L + LCK D ++ V++ F ++ +YN M+ L + R
Sbjct: 366 MEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARR 425
Query: 416 LREA-------------------------YG----------VIQEMKRKGLDPDVSFYNS 440
L EA YG + MK++G+ P ++ N+
Sbjct: 426 LDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNA 485
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+ + A+ +++ + G S + TYN+L+ +S+ G+I+ A +L M+ KG
Sbjct: 486 SLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKG 545
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
PD SL+ L + + AA+++F + N
Sbjct: 546 CEPDVMIINSLINTLYKAGRVDAAWKMFGRLKN 578
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/493 (23%), Positives = 213/493 (43%), Gaps = 27/493 (5%)
Query: 72 NWASQQPNFTHSPLSYHSILKSLSLSRQI-NAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
W +Q F SPL LK L ++ +A+D L+++ T ++ Y ++ L
Sbjct: 126 GWTAQAITF--SPL-----LKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLC 178
Query: 131 QGKNTQKAFSVFNEVKFNCEDIG--PEICN--SLLAVLASDGYIDNALKMFDEMSHRGVE 186
+Q+A + + + + G P++ + +++ L +G +D A +FDEM +G+
Sbjct: 179 DENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMS 238
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA--VLIIHGFCKGKRVEE 244
+ I + + +C + K + + + RK + V+ L+++ CK R E
Sbjct: 239 PNCITYNCLLHGYCSSGKPKEAIGIF---RKMCRDGVEPDVVTYNTLMVY-LCKNGRSME 294
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI- 303
A KV D + + KPD Y + + G + + +L + G P + I
Sbjct: 295 ARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIG 354
Query: 304 ----LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
G++ E + +K + + T V++AL V +D A+ F+ +I +
Sbjct: 355 AYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGT-VMDALC-RVGKVD--DAMSQFDRLISE 410
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P L LC +K D+ E+ + + +N +++ LC G + A
Sbjct: 411 GLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRA 470
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ M R + DV Y +L++ C + + A KL + M G N TYN +I+
Sbjct: 471 KNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIING 530
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ + G IE A LF M KGV P Y+++L GL Q + AA E++ + + L
Sbjct: 531 YCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLP 590
Query: 540 RSILSTFMISLCR 552
+ + LC+
Sbjct: 591 IGTYNIILQGLCQ 603
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 193/454 (42%), Gaps = 7/454 (1%)
Query: 81 THSPLSYHSILKSL---SLSRQ-INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
T + SY+ +LK L + S+Q ++ + +++ D Y +I L++
Sbjct: 164 TPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLD 223
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
KA+ +F+E+ N LL S G A+ +F +M GVE + + +
Sbjct: 224 KAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLM 283
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C+N + + + D + K+ + S I ++HG+ + + ++LD +
Sbjct: 284 VYLCKNGRSMEARKVFDSMVKKGHK--PDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNG 341
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
+PD + I+ + G V E + K R+ G+ P Y + L ++ +A
Sbjct: 342 TQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAM 401
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ ++S T + V LI + + D A MI +G P + L +L
Sbjct: 402 SQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHL 461
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
CK ++ ++ D D+ +Y ++ C G++ EA +++ M G+ P+
Sbjct: 462 CKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNE 521
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YN+++ C+ + A L+ QM + G + + Y+ ++ + I A L+
Sbjct: 522 VTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLW 581
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
M++ G+ TY +L+GLCQ A +F+
Sbjct: 582 MIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFH 615
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 144/331 (43%), Gaps = 6/331 (1%)
Query: 232 IIHGFCKGKRVEEAFKV-LDELRIRECKPDFIAYRIV----AEEFKLMGSVFEREVVLKK 286
++ G C KR +A + L + C P+ +Y I+ +E + ++ ++
Sbjct: 137 LLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMAD 196
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSID 345
+ G P Y I GL+ E ++ +A L + ++ + + N L+ G SS
Sbjct: 197 DTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGK 256
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
P+ AI F M G P + T + L LCK +S E +V+ + + D Y
Sbjct: 257 PKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGT 316
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++ T G L + + ++ M R G PD +N L+ A + ++ A + +M G
Sbjct: 317 LLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQG 376
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
N+ TY ++ VG+++ A+ F ++ +G+ P+ + +L+ GLC A
Sbjct: 377 LHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAE 436
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
E+ + + + +T + LC+ ++
Sbjct: 437 ELAVEMIGRGICPNTIFFNTLLNHLCKEGMV 467
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 106/552 (19%), Positives = 224/552 (40%), Gaps = 62/552 (11%)
Query: 24 TRPARKWTPLLEQTLHQLGLRDSLSPSL---VARVINPYLLTHHSLALGFF--NWASQQP 78
T A ++PLL+ H D++ +L A P +++ L G N + Q
Sbjct: 128 TAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQAL 187
Query: 79 NFTHSPL-------------SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
+ H+ + SY +++ L Q++ + ++ ++ + Y +
Sbjct: 188 HLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCL 247
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCED-IGPEIC--NSLLAVLASDGYIDNALKMFDEMSH 182
+ ++A +F ++ C D + P++ N+L+ L +G A K+FD M
Sbjct: 248 LHGYCSSGKPKEAIGIFRKM---CRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVK 304
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRV 242
+G + + +G + + L Q+ +LD V R + + + +LI + K V
Sbjct: 305 KGHKPDSSIYGTLLHGYATEGYLVQMHQLLD-VMVRNGTQPDHYIFNILI-GAYAKHGMV 362
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
+EA ++R + P+ + Y V + +G V + + G+ P +R
Sbjct: 363 DEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTL 422
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGR 361
I GL + +A+EL ++ + N L+ + + A F+ M+
Sbjct: 423 IHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDV 482
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
+ T + L C K DE ++ + + + + +YN +++ C +GR+ +A
Sbjct: 483 QCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACS 542
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+ ++M KG++P + Y++++ + + AK+L+ M G + TYNI++
Sbjct: 543 LFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLC 602
Query: 482 EVGEIEGALRLFHNM-----------------------------------LEKGVAPDAT 506
+ + ALR+FHN+ L +G+ P+
Sbjct: 603 QNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVV 662
Query: 507 TYTSLLEGLCQE 518
TY +++ L ++
Sbjct: 663 TYWLMMKSLIEQ 674
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 169/395 (42%), Gaps = 42/395 (10%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFD 178
Y ++ +L + A S F+ + E + P + +L+ L + D A ++
Sbjct: 383 TYGTVMDALCRVGKVDDAMSQFD--RLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAV 440
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGFC 237
EM RG+ +TI F + C+ + + ++ D + + + + VI +I G+C
Sbjct: 441 EMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVD---VQCDVITYTTLIDGYC 497
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
+V+EA K+L+ + + KP+ + Y + + G + + + ++ GV P
Sbjct: 498 LDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIV 557
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMI 357
Y + GL RRI AKEL + +MI
Sbjct: 558 IYSTILHGLFQTRRIAAAKEL----------------------------------YLWMI 583
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+ G + T + + + LC+ N +D+ + ++ L D+ ++N+M+ L GR
Sbjct: 584 KCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHD 643
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
EA + + +GL P+V Y +M++ + LL L+ + +GC+ + + N L+
Sbjct: 644 EAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALV 703
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
K + GE+ A + E + +A+T SL+
Sbjct: 704 GKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLV 738
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 160/375 (42%), Gaps = 44/375 (11%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG---QVLSMLDEV 215
+L+ L G + L D++ + + + + +G + C+ + ++L M+++
Sbjct: 85 TLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDR 144
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
R N ++ + II G CK K V EA+ + E+ RE P+ I Y + F L G
Sbjct: 145 STRPNVVMYSA-----IIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAG 199
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ +L + + P + I L E + AK++
Sbjct: 200 QLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQI----------------- 240
Query: 336 ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
F+ M++ G P + + + + LCK + DE + + + + +
Sbjct: 241 -----------------FHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKN 283
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D +YN ++ LC SGR+ A ++ EM +G DV Y SL++A C+ L A
Sbjct: 284 MVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKAT 343
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L+ +M G + TY LI + G ++ A LF ++L KG D TYT ++ GL
Sbjct: 344 ALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGL 403
Query: 516 CQETNLQAAFEVFNK 530
C+E A + +K
Sbjct: 404 CKEGMFDEALAIKSK 418
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 147/338 (43%), Gaps = 38/338 (11%)
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
++ ++ + + + I+ F +G + +L K KLG P T + + GL ++
Sbjct: 35 QMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKG 94
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
+ + + +V+ F + L+ G + + R AI + ++ P + S
Sbjct: 95 EVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYS 154
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
+ LCK +E ++Y + A + F ++ +YN ++ C +G+L A+ ++ EM K
Sbjct: 155 AIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILK 214
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
++PDV ++ L++A C+E + AK+++ M G + N+ +YNI+I+ + ++ A
Sbjct: 215 NINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEA 272
Query: 490 LRLFHNMLEKGVAPDATTY-----------------------------------TSLLEG 514
+ L ML K + PD TY TSLL+
Sbjct: 273 MNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDA 332
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
LC+ NL A +F K + + + LC+
Sbjct: 333 LCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCK 370
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 169/395 (42%), Gaps = 15/395 (3%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
+ + +++ +++K L L ++ + +V + Y ++ L + T+ A
Sbjct: 76 YXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAI 135
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+ ++ + ++++ L D ++ A ++ EM R + + I + I F
Sbjct: 136 KLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAF 195
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCK-GKRVEEAFKVLDELRIREC 257
C +L S+L E+ + IN V ++I CK GK ++ F + ++ +
Sbjct: 196 CLAGQLMGAFSLLHEMILKN---INPDVYTFSILIDALCKEGKNAKQIFHAMVQMGVN-- 250
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
P+ +Y I+ V E +L++ + P T Y I GL RI A
Sbjct: 251 -PNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALN 309
Query: 318 L-GEVIVSGK---FTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
L E+ G+ +L+AL + ++D +A+ F M E+G PT+ T + L
Sbjct: 310 LMNEMHHRGQPADVVTYTSLLDALCKN-QNLDKATAL--FMKMKERGIQPTMYTYTALID 366
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
LCK + E+++ L D+ +Y VM+S LC G EA + +M+ G P
Sbjct: 367 GLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIP 426
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
+ + ++ + +D A+KL +M A G G
Sbjct: 427 NAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLG 461
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 121/489 (24%), Positives = 201/489 (41%), Gaps = 74/489 (15%)
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLA 162
+DS LK+ + +K+ + L++ T+ + + N+V N G
Sbjct: 244 LDSFLKEGRNDKVAM-----------LLKEMETRGSGCLPNDVTHNVVITG--------- 283
Query: 163 VLASDGYIDNALKMFDEM--SHRGVEFS--TIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
LA G ++ A +M + M S + F+ + G+ F + A Q+ +
Sbjct: 284 -LARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQL--------EM 334
Query: 219 ENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
EN I +V+ +IHG + +VE A E+R +PD I Y + + GS+
Sbjct: 335 ENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSL 394
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E ++ R G+AP Y I G + EA+ L E +V D L
Sbjct: 395 KEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTIL 454
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ GS ++ A FF+ M+ KG P + + + + +V+
Sbjct: 455 MKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGI 514
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+D +YN+++ LC +G L +A + +M GL PD Y L+ A C LLR A+K
Sbjct: 515 SSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARK 574
Query: 457 LWDQMFASGCS----------------GNLK-------------------TYNILISKFS 481
+ M + G + GNL TYN+LI
Sbjct: 575 FFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALC 634
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA----FEVFNKSVNHDVM 537
G + A R FH MLE+G+ P+ TYT L++G C+E N + A FE+ ++ D +
Sbjct: 635 RTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYL 694
Query: 538 LARSILSTF 546
+++ F
Sbjct: 695 THKALFKGF 703
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 196/454 (43%), Gaps = 45/454 (9%)
Query: 139 FSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
S F+E+ + + P++ CN +L VL+ D+ + EM G+E S + + +
Sbjct: 187 LSAFHEMASH--GVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLL 244
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
F + + +V +L E+ R + + V ++I G + +EEA ++++ +R+ +
Sbjct: 245 DSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK 304
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
K Y + G V + + + + G+ P Y I GL+ ++ EA
Sbjct: 305 -KASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQV-EAA 362
Query: 317 ELGEVIVSGKFTIDDDVL--NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
++ V + + DV+ N+L+ G + + A++ F + G PT+ T + L
Sbjct: 363 QVKFVEMRA-MGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILID 421
Query: 374 NLCK-------RNKSDELVE--------VYKVLS-----------ANDYFTDMES----- 402
C+ R +E+VE Y +L A ++F +M S
Sbjct: 422 GYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQP 481
Query: 403 ----YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
YN + T G + +A+ + + M +G+ D YN L++ C+ L AK L
Sbjct: 482 DCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQ 541
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M +G + TY LI E G + A + F +M+ G+AP A TYT + C+
Sbjct: 542 MKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRR 601
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
NL +A+ F K + V + + +LCR
Sbjct: 602 GNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCR 635
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 176/425 (41%), Gaps = 26/425 (6%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S +Y+ ++ L + D + +++ I Y +I L+Q + A F
Sbjct: 307 SSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKF 366
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E++ + P++ NSLL G + AL +F ++ H G+ + + + + I +C
Sbjct: 367 VEMR--AMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYC 424
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIA-----VLIIHGFCKGKRVEEAFKVLDELRIR 255
+LG L+E R+ + M+ + +++ G + A + DE+ +
Sbjct: 425 ---RLGD----LEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSK 477
Query: 256 ECKPDFIAY--RIVAE-EFKLMGSVFE-REVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+PD AY RI AE + F REV++ + G++ T Y I GL
Sbjct: 478 GLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLE----GISSDTVTYNILIDGLCKTGN 533
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSN 370
+ +AK+L +V D LI + R A FF MI G P+ T +
Sbjct: 534 LNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTV 593
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
C+R ++ + + +YNV++ LC +GR + AY EM +G
Sbjct: 594 FIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERG 653
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L P+ Y L++ C+E A + + +M +G + T+ L F E G + A+
Sbjct: 654 LVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDE-GHMNHAI 712
Query: 491 RLFHN 495
N
Sbjct: 713 EYLEN 717
>gi|449507993|ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37230-like [Cucumis sativus]
Length = 760
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/537 (21%), Positives = 241/537 (44%), Gaps = 25/537 (4%)
Query: 28 RKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSY 87
R+WT L+ ++ L +LV V++ + H AL FF W + F H ++
Sbjct: 102 REWTTRLQNSIRSL--VPQFDHNLVYNVLHAAKKSEH--ALNFFRWVERAGLFQHDRETH 157
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
I++ L + ++N +L + + D ++ +I S + Q+A +F ++K
Sbjct: 158 FKIIEILGRASKLNHARCILLDMPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKE 217
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
+ + ++L + G A + F+ M + G+E + V +W F + +L
Sbjct: 218 LGVERSVKSYDALFKEIMRRGRYMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLET 277
Query: 208 VLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
++++ R I+ V+ +I+G+C+ K +EEA + E++ + P I+Y
Sbjct: 278 AKRFYEDMKSRG---ISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTT 334
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ + + + + + ++ + G P Y + GL ++ EA+++ +V+
Sbjct: 335 MIKGYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRH 394
Query: 327 FTIDDD--VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN-LSKNLCKRNKSDE 383
F D+ + L D +A+ MI + +PT + L +N CK D+
Sbjct: 395 FAPKDNSIFMRLLSCQCKHGDLDAAMHVLKAMI-RLSIPTEAGHYGILIENCCKAGMYDQ 453
Query: 384 LVEVYKVLSANDYFT------DMES--YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
V++ + L + +ME+ YN+++ +LC G+ +A +++ +KG+ +V
Sbjct: 454 AVKLLENLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEV 513
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
+F N+L+ +E A ++ M G S + ++Y +LI + GE A +
Sbjct: 514 AF-NNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDS 572
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN----KSVNHDVMLARSILSTFMI 548
M+E G +PD+ + S++E L + +Q A V N K + ++ L IL +
Sbjct: 573 MIENGHSPDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKILEALFM 629
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 83/455 (18%), Positives = 186/455 (40%), Gaps = 64/455 (14%)
Query: 51 LVARVINPYLLTHHSLALGF-----------FNWASQQPNFTHSPLSYHSILKS-LSLSR 98
+ +R I+P ++T++++ G+ F + N + +SY +++K +S+SR
Sbjct: 285 MKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSR 344
Query: 99 QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV---KFNCEDIGPE 155
+A+ + +++K + Y ++P L + +A + E+ F +D
Sbjct: 345 ADDAL-RLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKD--NS 401
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
I LL+ G +D A+ + M + +G+ I C+ Q + +L+ +
Sbjct: 402 IFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENL 461
Query: 216 RKRENSMINGSVIAV------LIIHGFC-----------------KGKRVEEAFKVLDEL 252
++E + S + + LII C KG + E AF L
Sbjct: 462 VEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVAFNNLIRG 521
Query: 253 RIRECKPDFIAYRIV-----------AEEFKLM-------GSVFEREVVLKKKRKLGVAP 294
+E PD +A+ ++ AE +KL+ G + + L + G +P
Sbjct: 522 HAKEGNPD-LAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSP 580
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFF 353
+ +R + L + R+ A + ++ T + D++ ++ ++ A+
Sbjct: 581 DSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEALGRI 640
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
N ++ P ++L ++ LC++ K+ ++ + + SY ++ L +
Sbjct: 641 NLLMNCNCPPDFNSLLSV---LCEKGKTTSAFKLLDFGLERECNIEFSSYEKVLDALLGA 697
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
G+ AY ++ ++ KG D S + L+++ +E
Sbjct: 698 GKTLNAYAILCKIMEKGGAKDWSSCDDLIKSLNQE 732
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 188/405 (46%), Gaps = 18/405 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
+ LL+ +A D + +F M G+ + + I C ++ LS++ ++ K
Sbjct: 73 SKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMK 132
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E ++ S + I+GFC+G RV A ++ ++ CK D + Y + + F G
Sbjct: 133 FGYEPDVVTVSSL----INGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTG 188
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
V V+ + + GV T Y + GL R +A L +V +
Sbjct: 189 LVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFT 248
Query: 336 ALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
ALI + V A F+ MI + P + T +++ LC + DE ++ ++
Sbjct: 249 ALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTK 308
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
F D+ +YN +++ C + R+ E +++EM ++GL D +N++++ + A
Sbjct: 309 GCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAA 368
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++++ +M G N++TY+IL+ +E AL LF +M + + D TTY ++ G
Sbjct: 369 QEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHG 425
Query: 515 LCQETNLQAAFEVFN----KSVNHDVMLARSILSTFMISLCRRVL 555
+C N++ A+++F K + DV+ +++S F CR+ L
Sbjct: 426 MCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGF----CRKRL 466
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 171/391 (43%), Gaps = 18/391 (4%)
Query: 82 HSPLSYHSILKSLS-LSRQINAIDSVLKQVKV----NKITLDSSVYRFIIPSLIQGKNTQ 136
H +Y+ ++ L SR + A+ V K +K + +T+ S +I QG
Sbjct: 102 HDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSS-----LINGFCQGNRVF 156
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
A + ++++ + I N+++ G ++NAL +F M GV T+ + +
Sbjct: 157 GAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLV 216
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C + + ++ ++ R+ ++ + +I+ F + + EA K +E+ IR
Sbjct: 217 TGLCCSGRRSDAARLMRDMVMRD--IVPNVITFTALINAFVREGKFLEAKKFYEEM-IRR 273
Query: 257 C-KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
C PD Y + + G V E + +L G P Y I G +R+ E
Sbjct: 274 CIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEG 333
Query: 316 KELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+L + +D N +I G + P +A F+ M G P + T S L
Sbjct: 334 TKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYG 390
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LC + ++ + +++ + ++ D+ +YN+++ +C G + +A+ + + KGL+PD
Sbjct: 391 LCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPD 450
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
V Y +++ CR+ L A L+ +M G
Sbjct: 451 VVTYTTMISGFCRKRLWDKADFLYRKMQEDG 481
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 142/343 (41%), Gaps = 7/343 (2%)
Query: 195 FIWKFCENAKLGQVLSM-LDEVRKRENSMINGSVIAVLI-----IHGFCKGKRVEEAFKV 248
FI +F A + LSM LDE +MI + ++ + K K + +
Sbjct: 32 FISRFWGRAFTTKRLSMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISL 91
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
+ I D Y IV V+ K K G P I G
Sbjct: 92 FHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQ 151
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
R+ A +L + + +D + N +I G + +A+V F M G T
Sbjct: 152 GNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVT 211
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
++L LC + + + + + D ++ ++ +++ G+ EA +EM
Sbjct: 212 YNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMI 271
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
R+ +DPDV YNS++ C + AK++ D M GC ++ TYN LI+ F + ++
Sbjct: 272 RRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVD 331
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+L M ++G+ D T+ ++++G Q AA E+F++
Sbjct: 332 EGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSR 374
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/440 (19%), Positives = 189/440 (42%), Gaps = 18/440 (4%)
Query: 70 FFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSL 129
F N +P S + + +L +++ S+ + + S+ +++ I D Y +I L
Sbjct: 57 FCNMIQSRP--LPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCL 114
Query: 130 IQGKNTQKAFSVFNEV-KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVE 186
+ A SV ++ KF E P++ +SL+ + A+ + +M +
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYE---PDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCK 171
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
+ + I FC+ + L + R + + +V ++ G C R +A
Sbjct: 172 LDVVIYNTIIDGFCKTGLVNNALVLFG--RMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
+++ ++ +R+ P+ I + + F G E + ++ + + P Y I GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALIGS---VSSIDPRSAIVFFNFMIEKGRVP 363
+ ++ EAK++ +++V+ D N LI +D + +V M ++G V
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLV--REMSQRGLVV 347
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
T + + + + + D E++ + + ++ +Y++++ LC + R+ +A +
Sbjct: 348 DTVTFNTIIQGYFQAGRPDAAQEIFSRMGSR---PNIRTYSILLYGLCYNWRVEKALVLF 404
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+ M++ ++ D++ YN ++ C + A L+ + G ++ TY +IS F
Sbjct: 405 ESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRK 464
Query: 484 GEIEGALRLFHNMLEKGVAP 503
+ A L+ M E G+ P
Sbjct: 465 RLWDKADFLYRKMQEDGLLP 484
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 82/209 (39%), Gaps = 35/209 (16%)
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
S++ AI F MI+ +P++ S L N+ K D ++ ++ + D+ +
Sbjct: 47 SMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYT 106
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN++++ LC R A V+ +M + G +PDV +SL+ C+
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQ--------------- 151
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
GN + GA+ L M E D Y ++++G C+ +
Sbjct: 152 -----GN---------------RVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVN 191
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLC 551
A +F + V ++ + LC
Sbjct: 192 NALVLFGRMERDGVRADTVTYNSLVTGLC 220
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%)
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L+ M G +L TYNI+I+ AL + M++ G PD T +SL+ G C
Sbjct: 91 LFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 150
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
Q + A ++ +K L I +T + C+ L+
Sbjct: 151 QGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLV 190
>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 191/450 (42%), Gaps = 52/450 (11%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
YR I S ++ +A F+E+ K NC + N + VL D A + +D M
Sbjct: 12 YRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDY-NRFIGVLVRQSRFDLAEQYYDRM 70
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV----LIIHGF 236
+G ++ + FI C+ + +L+++ + G V + + ++
Sbjct: 71 IPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRL------GYVPDIWAYNIYLNLL 124
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
C +++ A V+ + + +PD + Y IV G + + + G +P
Sbjct: 125 CCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDE 184
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS---IDPRSAIVFF 353
R +LGL + ++ A EL + G+ + N+LI ID +I+ F
Sbjct: 185 KACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISF 244
Query: 354 -----------------NF----------------MIEKGRVPTLSTLSNLSKNLCKRNK 380
N+ M G P + + + L K LCK N+
Sbjct: 245 MRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANR 304
Query: 381 SDE--LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
D+ ++ V K+ + D+ SYN ++ LCT+ + AY + +EM KG+ PDV +
Sbjct: 305 LDKAYMMMVNKMEAKG--LCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTF 362
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
L++A RE AKKL DQM G + Y ++ + G++ A +F +M+E
Sbjct: 363 TILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVE 422
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
G+ PD +Y +L+ GLC+ + + A ++
Sbjct: 423 SGITPDVVSYNALINGLCRASRVSEAMHLY 452
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 158/369 (42%), Gaps = 13/369 (3%)
Query: 154 PEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM 211
P+I + + L G D+A++++ M +G + C + K+ +
Sbjct: 147 PDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYEL 206
Query: 212 -LDEVRKR---ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
+ +R R S+ N +I+GFC+ +++A ++ +R C+PD + Y ++
Sbjct: 207 TVGAMRGRIKFSKSIYNS------LINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVL 260
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
+ E E ++KK + GV P Y E + GL R+ +A + + K
Sbjct: 261 LNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKG 320
Query: 328 TIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
D N +I ++ + + A F M KG P + T + L K + S+ +
Sbjct: 321 LCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKK 380
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
+ ++ D Y +V LC +G++ A+ V +M G+ PDV YN+L+ C
Sbjct: 381 LLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLC 440
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
R + A L++ M G + T+ ++I ++ A R++ M+EKG D
Sbjct: 441 RASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGA 500
Query: 507 TYTSLLEGL 515
+L+ +
Sbjct: 501 VSETLVNAI 509
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 41/204 (20%)
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND---YFTDMESYNVMVS 408
+++ MI +G T S LCK V + K+L D Y D+ +YN+ ++
Sbjct: 66 YYDRMIPQGFSLNSFTYSRFISGLCK---VKNFVLIEKLLEDMDRLGYVPDIWAYNIYLN 122
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC +L A GV+Q M KG +PD+
Sbjct: 123 LLCCENQLDVALGVVQTMVEKGREPDIV-------------------------------- 150
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
TY I+I+ G + A+ ++ NM+ KG +PD +L+ GLC + + A+E+
Sbjct: 151 ---TYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELT 207
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
++ + ++SI ++ + C+
Sbjct: 208 VGAMRGRIKFSKSIYNSLINGFCQ 231
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 131/335 (39%), Gaps = 42/335 (12%)
Query: 113 NKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN-CEDIGPEIC--NSLLAVLASDGY 169
+I S+Y +I Q KA S+ + ++ N CE P++ N LL +
Sbjct: 213 GRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCE---PDLVTYNVLLNYCCDELL 269
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
++ A + +M GVE + + C+ +L + M+ V K E + V
Sbjct: 270 LEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMM--VNKMEAKGLCDVVSY 327
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
II C + A+K+ +E+ + PD + + I+ + F GS + +L +
Sbjct: 328 NTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTG 387
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSA 349
LG+ P + +L + +C+ ++G A
Sbjct: 388 LGLLP------DRVLYTTIVDHLCKTGKMG----------------------------MA 413
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F M+E G P + + + L LC+ ++ E + +Y+ + D ++ +++
Sbjct: 414 HSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGG 473
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
L +L A V +M KG D + +L+ A
Sbjct: 474 LIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVNA 508
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 112/263 (42%), Gaps = 43/263 (16%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
SY+ +LK L + +++ ++ K D Y II +L +T++A+ +F E+
Sbjct: 291 SYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEM 350
Query: 146 KFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ I P++ L+ +G + A K+ D+M+ G+ + + + C+
Sbjct: 351 --GGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTG 408
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
K+G S+ ++ + S I V++ +I+G C+ RV EA + +++ PD +
Sbjct: 409 KMGMAHSVFCDMVE---SGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEV 465
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
++++ I GLI E+++ A + + +
Sbjct: 466 TFKLI-----------------------------------IGGLIWEKKLSVACRVWDQM 490
Query: 323 VSGKFTIDDDVLNALIGSVSSID 345
+ FT+D V L+ ++ S D
Sbjct: 491 MEKGFTLDGAVSETLVNAIHSND 513
>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 122/530 (23%), Positives = 242/530 (45%), Gaps = 29/530 (5%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQIN-AID 104
+++ SLV RVI + LAL F +W ++ + HS S ++ L S++ + A+
Sbjct: 4 NMTCSLVGRVICKFQ-NSPQLALEFHDWVLEKKSVLHSIESCCVVIHVLVNSKRYDDALF 62
Query: 105 SVLKQVKVNKIT----LDS------------SVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
+ + VN I+ LD+ +V+ ++ + Q T+ A+ V +++ +
Sbjct: 63 IMGNLMNVNGISPLEVLDALISSYDICKSSPAVFDALVRTCTQIGATEGAYEVITKLQLD 122
Query: 149 CEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV 208
+ N+ L+ L ++ KM+ EM G + F + I+ + +L +
Sbjct: 123 GFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEA 182
Query: 209 LSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE---CKPDFIAYR 265
+S++ R + + V +II G K ++ A K++ ++ + KPD + Y
Sbjct: 183 VSVI--YRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYN 240
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLG--VAPRTNDYREFILGLIVERRICEAKELGEVIV 323
F +G++ E KK LG + P Y + G + A L + +V
Sbjct: 241 SFVNGFCKIGNLAVAEEF--KKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELV 298
Query: 324 SGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+ + N++I +S D A + + MI+K P T S + + LC+ +
Sbjct: 299 EKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLN 358
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E + +++ D S+NV++++LC S L A ++ M +GL PDV + +L+
Sbjct: 359 EAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLI 418
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+ C++ + A +++++M +G NL YN +I+ F++ G + A+ L + G+
Sbjct: 419 DRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF 478
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
D TY +L+ G C + AF +F++ N ++ + +T + SLC+
Sbjct: 479 -DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCK 527
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 165/390 (42%), Gaps = 7/390 (1%)
Query: 168 GYIDNALKM---FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
G +D ALK+ + MS V+ ++ + F+ FC+ L E+ +E N
Sbjct: 212 GAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEP-N 270
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
A L+ G+ + +E AF++ DEL + P+ + Y + + G + ++L
Sbjct: 271 VRTYATLV-DGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLL 329
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-S 343
+ P Y I GL + EA + ++I+ D N +I + S
Sbjct: 330 SDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRS 389
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ A M +G VP + T L CK K + ++VY+ + ++ Y
Sbjct: 390 NNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIY 449
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N +++ G A +I ++R GL DV YN+L+ C + A L+ +M
Sbjct: 450 NSVINGFAKEGSFDPAILLIDTLRRMGL-FDVVTYNTLIHGYCNCGKIDQAFALFSEMRN 508
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
SG + TYN LI+ + G + A L M+ +G+ PD TYT L+ ++ + +
Sbjct: 509 SGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEE 568
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCRR 553
E+ + V V+ R T +I L +
Sbjct: 569 VIELHDYMVLKGVVPDRQTYQTMVIPLLQE 598
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 196/442 (44%), Gaps = 46/442 (10%)
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLAS 166
L+ VK + ++S Y+ ++ + ++ ++ KAF V+ E++ + N LL LA
Sbjct: 191 LRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK 250
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
D + A ++F++M R + + I K + + + +E+ + G
Sbjct: 251 D---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEM------ITEGL 301
Query: 227 VIAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+ V+ ++ KGK V++A +V + C+P+ Y ++ G + +
Sbjct: 302 TLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDG 361
Query: 283 VLK-KKR---------------KLG----------------VAPRTNDYREFILGLIVER 310
V++ KR KLG V + Y + L
Sbjct: 362 VVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAG 421
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLS 369
+ EA E+ I D + N + ++ + S I F M + G P + T +
Sbjct: 422 KTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYN 481
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
L + + + DE + +++ L +D D+ SYN +++ L +G + EA+ +EM+ K
Sbjct: 482 ILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEK 541
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
GL+PDV Y++LME + + + A L+++M GC N+ TYNIL+ + G A
Sbjct: 542 GLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEA 601
Query: 490 LRLFHNMLEKGVAPDATTYTSL 511
+ L+ M ++G+ PD+ TYT L
Sbjct: 602 VDLYSKMKQQGLTPDSITYTVL 623
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 36/203 (17%)
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K ++ +V++ + D +Y +M+ + G+ EA G+ EM +GL +V YN
Sbjct: 250 KDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYN 309
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL------------------ISK-- 479
+LM+ + ++ A +++ +M +GC N TY++L ISK
Sbjct: 310 TLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRY 369
Query: 480 ------------FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE- 526
S++G + A RLF +M V + +Y S+LE LC A E
Sbjct: 370 MTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEM 429
Query: 527 ---VFNKSVNHDVMLARSILSTF 546
+ K V D M+ ++ S
Sbjct: 430 LSKIHEKGVVTDTMMYNTVFSAL 452
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 127/307 (41%), Gaps = 21/307 (6%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF---KLMGSVFEREVVLKKKR 288
++ + + + +AF V E+R K D AY ++ + + VFE KKR
Sbjct: 209 LLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFED----MKKR 264
Query: 289 KLGVAPRTNDYREFILGLIVER--RICEAKELGEVIVSGKFTIDDDVLNALIGSVSS--- 343
R ++Y I+ + R + EA L +++ T++ N L+ ++
Sbjct: 265 HC----RRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKM 320
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+D AI F+ M+E G P T S L L +LV + V+ + + Y
Sbjct: 321 VD--KAIQVFSRMVETGCRPNEYTYSLLLNLLVAEG---QLVRLDGVVEISKRYMTQGIY 375
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+ +V L G + EA+ + +M + + Y S++E+ C A ++ ++
Sbjct: 376 SYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHE 435
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G + YN + S ++ +I LF M + G +PD TY L+ + +
Sbjct: 436 KGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDE 495
Query: 524 AFEVFNK 530
A +F +
Sbjct: 496 AINIFEE 502
>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 766
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 192/428 (44%), Gaps = 7/428 (1%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y++++ + +++ +L+ ++ + I+ + Y +I L + +KA + E+
Sbjct: 326 YNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMV 385
Query: 147 FNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ P + +SL L G + +L MF + G + I + I F
Sbjct: 386 --QSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRD 443
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+G ++ E+R N + S +IHGFCK +R+++A +V + + +
Sbjct: 444 MGSACKLVHEMRM--NGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTC 501
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
I+A+EF G +E ++ + + LG+ P + Y I L E++ +A E+ V++
Sbjct: 502 NIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLK 561
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
N LI G +P A++ + M++ G P++ T + L R+K E
Sbjct: 562 NNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQE 621
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
++K + D + +++ C G ++ A+ + +EM + G P+V Y L++
Sbjct: 622 AYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLID 681
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+ + A L+++M + + TY LI + +G + +F+ M E GV P
Sbjct: 682 GYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFP 741
Query: 504 DATTYTSL 511
+ T Y +L
Sbjct: 742 NYTAYATL 749
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 167/384 (43%), Gaps = 39/384 (10%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN LL A + +F+E+ G + + + + +C+ + G+ + ++
Sbjct: 216 CNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGS-FGKNIDIVKATE 274
Query: 217 KRENSMINGSVIAVLI----IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
E +NG V+ IHG C+ VE A +++ +LRIR + Y V EF
Sbjct: 275 VLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFC 334
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
G + E +L+ R G++P Y I GL + ++ +A +L E
Sbjct: 335 RNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEE----------- 383
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
M++ P+L T S+L LCK ++ + ++ L
Sbjct: 384 -----------------------MVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLG 420
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
A Y D+ SYN +++ + A ++ EM+ G P+ +N L+ C+ L
Sbjct: 421 AEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLD 480
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A +++ M G N+ T NI+ +F+ G AL+L + + + G+ P++ TY ++
Sbjct: 481 KALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVI 540
Query: 513 EGLCQETNLQAAFEVFNKSVNHDV 536
+ LC+E + A+EV + ++V
Sbjct: 541 KWLCKEQKTEKAWEVLPVMLKNNV 564
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/487 (21%), Positives = 208/487 (42%), Gaps = 43/487 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQG---KNTQ--KAF 139
LS + +L + + Q I S+ +++K + + + Y ++ +G KN KA
Sbjct: 214 LSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKAT 273
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
V E++ N E + + L G ++ AL++ ++ R ++ + I +F
Sbjct: 274 EVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEF 333
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
C N +L + +L+++R S S ++I G CK +VE+A +++E+ KP
Sbjct: 334 CRNGELHEAFELLEDMRSHGISPTAYSY--SILIDGLCKKGQVEKALDLIEEMVQSNVKP 391
Query: 260 DFIAY---------------------RIVAEEFK---------LMGSVFEREV-----VL 284
+ Y + AE +K + G V +R++ ++
Sbjct: 392 SLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLV 451
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
+ R G P + + I G +R+ +A E+ +++ ++ N + +
Sbjct: 452 HEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNRE 511
Query: 345 DP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
A+ N + + G VP T + + K LCK K+++ EV V+ N+ F Y
Sbjct: 512 GHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHY 571
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N ++ +A + +M + G+ P + Y L+ ++ A L+ +M
Sbjct: 572 NTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIK 631
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G + + +I+ F +VG+++ A L+ M + G +P+ TYT L++G + +
Sbjct: 632 KGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDK 691
Query: 524 AFEVFNK 530
A +FNK
Sbjct: 692 ADFLFNK 698
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 5/137 (3%)
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDL-----LRPAKKLWDQMFASGCSGNLKTYNIL 476
+ +E+K G P+V Y +M C+ + A ++ ++M +G S + TY
Sbjct: 235 LFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAY 294
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I G +E ALRL ++ + ++ Y +++ C+ L AFE+ +H +
Sbjct: 295 IHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGI 354
Query: 537 MLARSILSTFMISLCRR 553
S + LC++
Sbjct: 355 SPTAYSYSILIDGLCKK 371
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 94/227 (41%), Gaps = 6/227 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y+ ++K L ++ VL + N + + Y +I + N KA ++
Sbjct: 535 TYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLY--A 592
Query: 146 KFNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
K I P I L+ + ++ + A +F EM +G+ I F I FC+
Sbjct: 593 KMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVG 652
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ ++ +E+ + S V +I G+ K KR+++A + ++++ PD +
Sbjct: 653 DMKSAWALYEEMSQWGKS--PNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLT 710
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
Y + ++ +G + + ++ GV P Y L L V R
Sbjct: 711 YTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATLGLHLGVVR 757
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 194/449 (43%), Gaps = 36/449 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++ + + D++ K+ K +L+ +Y II + Q N ++A + E
Sbjct: 334 VTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVCE 393
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ + D ++ +S++ + L +F+ + G + S I +G + + + K
Sbjct: 394 MEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGK 453
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ + LS+ E+ + + + ++I+GF AF + +E+ +PD Y
Sbjct: 454 VAKALSISKEMES--CGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIY 511
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
++ E F MG++ +L+K +K + P +R I G V
Sbjct: 512 NLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAV---------------- 555
Query: 325 GKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ D +SA+ + M G VPT+ T + L L +++K
Sbjct: 556 ------------------AGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRA 597
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
V V +S + +Y +++ SG + +A+ ++K GL DV Y +L+ A
Sbjct: 598 VSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRA 657
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
CC+ ++ A + +M N YNILI ++ G++ A L M E GV P+
Sbjct: 658 CCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPN 717
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
TYTS + C+ ++Q A +V + V+
Sbjct: 718 IHTYTSYINACCKAGDMQRAEKVIEEMVD 746
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 163/374 (43%), Gaps = 5/374 (1%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+ SL+ A + AL +EM G+E + + + + I F + ++ E
Sbjct: 300 VFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEA 359
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ + +S+ NG +I IIH C+ +E A +++ E+ Y + + ++
Sbjct: 360 KTKLSSL-NG-IIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQ 417
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE-RRICEAKELGEVIVSGKFTIDDDVL 334
+ + VV ++ ++ G P Y +L L V+ ++ +A + + + S ++
Sbjct: 418 NENKCLVVFERLKECGFKPSIISY-GCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTY 476
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
+ LI G + D +A F M+ G P + + L + CK D + + + +
Sbjct: 477 SMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQK 536
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
++ ++ +G ++ A + M+R G P V YN+L+ R+ ++
Sbjct: 537 ERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQR 596
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A + D+M +G + N TY I++ ++ G+I A F + E G+ D Y +LL
Sbjct: 597 AVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLR 656
Query: 514 GLCQETNLQAAFEV 527
C+ +Q+A V
Sbjct: 657 ACCKSGRMQSALAV 670
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/444 (19%), Positives = 178/444 (40%), Gaps = 61/444 (13%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F S +SY +L ++ S+ K+++ I ++ Y +I I + A
Sbjct: 433 GFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANA 492
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
F++F E+ + I N L+ G +D A+ + ++M ++ S F I
Sbjct: 493 FAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEG 552
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDELRI 254
+ + L LD +R+ +G V V+ +IHG + +V+ A VLD++ I
Sbjct: 553 YAVAGDMKSALDTLDLMRR------SGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSI 606
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
P+ Y I+ + G + + K ++ G+ Y + R C+
Sbjct: 607 AGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLL------RACCK 660
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+ + + + S I PR+ + +N +I+
Sbjct: 661 SGRMQSALAVTREM-----------SFQKI-PRNTFI-YNILID---------------G 692
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
+R E ++ K + + ++ +Y ++ C +G ++ A VI+EM GL P+
Sbjct: 693 WARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPN 752
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V Y +L++ R L A K +++M +G + +Y+ L++
Sbjct: 753 VKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVT---------------- 796
Query: 495 NMLEKGVAPDATTYTSLLEGLCQE 518
++L + + +TYT ++ +C+E
Sbjct: 797 SLLSRATVMEGSTYTGII-SVCRE 819
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 62/125 (49%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+ +M+ + G A + M+ +G++P+ + SL+ A +R A ++M
Sbjct: 266 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMK 325
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
+ G + TY+ILIS F+++ + + A LF K + + Y++++ CQ N++
Sbjct: 326 SEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNME 385
Query: 523 AAFEV 527
A E+
Sbjct: 386 RAEEL 390
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 157/361 (43%), Gaps = 36/361 (9%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L G + +A +FDEM RGV + + F I C L ++ R
Sbjct: 120 NVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETL--HRRM 177
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E + +I G C+ R+E+A V +++ R KP+ + + I+ + G
Sbjct: 178 SEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDA 237
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ ++ R+ GV P Y + GL C A++L
Sbjct: 238 ETMLELHREMRERGVRPDAVTYNAIVNGL------CRARDL------------------- 272
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
+SA M G P T + L CK + D +E+ + + A
Sbjct: 273 ---------KSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVG 323
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D +Y ++S L +GR +A V+ EM GL+PD + Y +++A CR+ ++ +L
Sbjct: 324 LDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRL 383
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+M G + TYN++++ F ++G+++ A L + M+ GV+PD TY LL+G C+
Sbjct: 384 LKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCK 443
Query: 518 E 518
Sbjct: 444 H 444
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 132/306 (43%), Gaps = 38/306 (12%)
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A V DE++ R + +++ + G + E + ++ + GV P Y I
Sbjct: 135 AQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQ 194
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT 364
GL RI +A+ + F M +G P
Sbjct: 195 GLCRVGRIEDARGV----------------------------------FEKMCGRGMKPN 220
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
+ L CK+ ++ ++E+++ + D +YN +V+ LC + L+ A G++
Sbjct: 221 AVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVV 280
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
EM+ GL PD Y +L++ C+E+ L A ++ M A G + TY LIS S+ G
Sbjct: 281 EMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAG 340
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF----EVFNKSVNHDVMLAR 540
A R+ M+E G+ PD TTYT +++ C++ +++ E+ NK V+
Sbjct: 341 RSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYN 400
Query: 541 SILSTF 546
I++ F
Sbjct: 401 VIMNGF 406
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 82/151 (54%), Gaps = 9/151 (5%)
Query: 383 ELVEVYKVLSANDYFTDMES---------YNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
+LV + ++ SA + F +M+S +N M+S +C +G L A + + M G+ P
Sbjct: 125 DLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTP 184
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
DV Y +L++ CR + A+ ++++M G N + ILI + G+ E L L
Sbjct: 185 DVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELH 244
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
M E+GV PDA TY +++ GLC+ +L++A
Sbjct: 245 REMRERGVRPDAVTYNAIVNGLCRARDLKSA 275
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 99/220 (45%), Gaps = 1/220 (0%)
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N +I G + D A M E G P + T L + LC+ + ++ V++ +
Sbjct: 155 NTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCG 214
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ + +++ C G + +EM+ +G+ PD YN+++ CR L+
Sbjct: 215 RGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKS 274
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A + +M ++G + TY LI + + E++ A+ + NM+ +GV D TYT+L+
Sbjct: 275 ASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALIS 334
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
GL + A V + + + + + + + CR+
Sbjct: 335 GLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRK 374
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+NV++ L G L A V EM+ +G+ V +N+++ CR L A+ L +M
Sbjct: 119 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMS 178
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ----E 518
+G + ++ TY LI VG IE A +F M +G+ P+A +T L++ C+ E
Sbjct: 179 EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAE 238
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
T L+ E+ + V D + +I++ LCR
Sbjct: 239 TMLELHREMRERGVRPDAVTYNAIVN----GLCR 268
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%)
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
GL P+ +N LM R L A+ ++D+M + G + ++N +IS G+++GA
Sbjct: 111 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 170
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
L M E GV PD TY +L++GLC+ ++ A VF K + + + + +
Sbjct: 171 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 230
Query: 550 LCRR 553
C++
Sbjct: 231 HCKK 234
>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 690
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 123/536 (22%), Positives = 228/536 (42%), Gaps = 75/536 (13%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWASQQ-PNFTHSPLSYHSILKSLSLS---RQIN 101
SL+P+ + ++ L LAL FF+ S P F H +Y IL LS S ++I+
Sbjct: 132 SLTPAEASEILKS--LNSPDLALQFFHRCSSLCPKFRHDAFTYSRILLMLSHSSSSKRID 189
Query: 102 AIDSVLKQVKVNKIT--------------------------------LDSSVYRFIIPSL 129
+ +L Q+ ++I L++ YR ++ +
Sbjct: 190 QVREILSQMDRDQIRGTISTVNILIKIFSSNEDLELCTGLIKKWDLRLNAYTYRCLLQAH 249
Query: 130 IQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
I+ +++ +AF+V+ E+ + N LL LA D +D + K+F +M +
Sbjct: 250 IRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDE 309
Query: 190 IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKV 248
+ + I + + + L++ +E+ + ++IA +I K V++A +
Sbjct: 310 YTYTIMIRMTGKMGRAEESLALFEEMLTKG---CTPNLIAYNTMIQALSKSGMVDKAILL 366
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL----------------KKKRKLGV 292
+ C+P+ Y I+ G + + VL + KLG
Sbjct: 367 FCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKFINKSIYAYLVRTLSKLGH 426
Query: 293 APRT----------------NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ + Y + L + EA EL + + D + N
Sbjct: 427 SSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNT 486
Query: 337 LIGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
++ ++ + S + + M + G P + T + L +L + K E VEV++ L ++D
Sbjct: 487 VLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSD 546
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D+ SYN +++ L +G + EA+ EM+ KGL+PDV Y++L+E + D + A+
Sbjct: 547 CKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMAR 606
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
L+D+M GC N+ TYNIL+ G + L+ + E+G+ PD+ TY L
Sbjct: 607 SLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTPDSITYAIL 662
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 114/300 (38%), Gaps = 37/300 (12%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+++ K ++++ ++KV +++++ C PD Y I+ MG E + ++
Sbjct: 279 MLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTK 338
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
G P Y I L S +D AI
Sbjct: 339 GCTPNLIAYNTMIQAL-----------------SKSGMVD-----------------KAI 364
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+ F MI+ P T S + L + L EV L ++ F + Y +V L
Sbjct: 365 LLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEV---LEVSNKFINKSIYAYLVRTL 421
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
G EA+ + M D Y S++E+ CR A +L ++ G S +
Sbjct: 422 SKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDT 481
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
YN ++S ++ ++ L+ M + G PD TY L+ L + ++ A EVF +
Sbjct: 482 MMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEE 541
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%)
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A+ V EM KG D+ YN L++A +++ L + K++ M C+ + TY I+I
Sbjct: 258 AFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIR 317
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++G E +L LF ML KG P+ Y ++++ L + + A +F
Sbjct: 318 MTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLF 367
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 111/499 (22%), Positives = 227/499 (45%), Gaps = 22/499 (4%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQ-QPNFTHSPLSYHSILKSLSLSRQI- 100
LR + ++ V+N L H + LGF A + ++ +++ ++++ L ++
Sbjct: 101 LRIPVDAFALSTVVNSCCLMHRT-DLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVK 159
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSL 160
+A+ K V+ N D +Y ++ L + +TQKAF + ++ I N +
Sbjct: 160 DAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIV 219
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
+ DG +D A + +EM + + I + I LG+ LS ++VR
Sbjct: 220 IDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLI------DGLGK-LSQWEKVRTLFL 272
Query: 221 SMINGSVIAVL-----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
MI+ ++ + +I G CK +VE+A +++ + + +P+ I Y +V + + L G
Sbjct: 273 EMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRG 332
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ + G+ P Y I G + ++++ +A +L I +
Sbjct: 333 QMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCS 392
Query: 336 ALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
L+ + + A +FF+ M G +P L T L K +E + + L
Sbjct: 393 VLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERR 452
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
T+++ Y +++ LC +G+L +A+ +++ GL PDV Y +++ C+E LL A
Sbjct: 453 REDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA 512
Query: 455 KKLWDQMFASGCSGNLKTYNILISKF---SEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
K + +M +GC + +TYN+++ F S+V E++ L+ + K + +A T L
Sbjct: 513 KDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLK---EIAGKSFSFEAATVELL 569
Query: 512 LEGLCQETNLQAAFEVFNK 530
++ + ++ +L F++
Sbjct: 570 MDIIAEDPSLLNMIPEFHR 588
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 1/188 (0%)
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVL-SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
T + L + L NK + V ++K L N D Y ++ LC G ++A+ +++
Sbjct: 144 TFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRL 203
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M++ PD YN +++A C++ +L A L ++M ++ TY LI ++ +
Sbjct: 204 MEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQ 263
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
E LF M+ + PD T+ S+++GLC+E ++ A E+ + V +
Sbjct: 264 WEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNV 323
Query: 546 FMISLCRR 553
M C R
Sbjct: 324 VMDGYCLR 331
>gi|449464322|ref|XP_004149878.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Cucumis sativus]
Length = 760
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 117/537 (21%), Positives = 241/537 (44%), Gaps = 25/537 (4%)
Query: 28 RKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSY 87
R+WT L+ ++ L +LV V++ + H AL FF W + F H ++
Sbjct: 102 REWTTRLQNSIRSL--VPQFDHNLVYNVLHAAKKSEH--ALNFFRWVERAGLFQHDRETH 157
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
I++ L + ++N +L + + D ++ +I S + Q+A +F ++K
Sbjct: 158 FKIIEILGRASKLNHARCILLDMPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKE 217
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
+ + ++L + G A + F+ M + G+E + V +W F + +L
Sbjct: 218 LGVERSVKSYDALFKEIMRRGRYMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLET 277
Query: 208 VLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
++++ R I+ V+ +I+G+C+ K +EEA + E++ + P I+Y
Sbjct: 278 AKRFYEDMKSRG---ISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTT 334
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ + + + + + ++ + G P Y + GL ++ EA+++ +V+
Sbjct: 335 MIKGYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRH 394
Query: 327 FTIDDD--VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN-LSKNLCKRNKSDE 383
F D+ + L D +A+ MI + +PT + L +N CK D+
Sbjct: 395 FAPKDNSIFMRLLSCQCKHGDLDAAMHVLKAMI-RLSIPTEAGHYGILIENCCKAGMYDQ 453
Query: 384 LVEVYKVLSANDYFT------DMES--YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
V++ + L + +ME+ YN+++ +LC G+ +A +++ +KG+ +V
Sbjct: 454 AVKLLENLVEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEV 513
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
+F N+L+ +E A ++ M G S + ++Y +LI + GE A +
Sbjct: 514 AF-NNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDS 572
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN----KSVNHDVMLARSILSTFMI 548
M+E G +PD+ + S++E L + +Q A V N K + ++ L IL +
Sbjct: 573 MIENGHSPDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKILEALFM 629
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 83/455 (18%), Positives = 186/455 (40%), Gaps = 64/455 (14%)
Query: 51 LVARVINPYLLTHHSLALGF-----------FNWASQQPNFTHSPLSYHSILKS-LSLSR 98
+ +R I+P ++T++++ G+ F + N + +SY +++K +S+SR
Sbjct: 285 MKSRGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSR 344
Query: 99 QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV---KFNCEDIGPE 155
+A+ + +++K + Y ++P L + +A + E+ F +D
Sbjct: 345 ADDAL-RLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKD--NS 401
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
I LL+ G +D A+ + M + +G+ I C+ Q + +L+ +
Sbjct: 402 IFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENL 461
Query: 216 RKRENSMINGSVIAV------LIIHGFC-----------------KGKRVEEAFKVLDEL 252
++E + S + + LII C KG + E AF L
Sbjct: 462 VEKEIILRPQSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVAFNNLIRG 521
Query: 253 RIRECKPDFIAYRIV-----------AEEFKLM-------GSVFEREVVLKKKRKLGVAP 294
+E PD +A+ ++ AE +KL+ G + + L + G +P
Sbjct: 522 HAKEGNPD-LAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSMIENGHSP 580
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFF 353
+ +R + L + R+ A + ++ T + D++ ++ ++ A+
Sbjct: 581 DSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKILEALFMRGHDEEALGRI 640
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
N ++ P ++L ++ LC++ K+ ++ + + SY ++ L +
Sbjct: 641 NLLMNCNCPPDFNSLLSV---LCEKGKTTSAFKLLDFGLERECNIEFSSYEKVLDALLGA 697
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
G+ AY ++ ++ KG D S + L+++ +E
Sbjct: 698 GKTLNAYAILCKIMEKGGAKDWSSCDDLIKSLNQE 732
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 185/422 (43%), Gaps = 19/422 (4%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS-------LLAVLASDGYI 170
D +Y ++I +L + + ++A + + EIC+ ++ L DG
Sbjct: 43 DILLYGYLINALRKTRQARRAVELHRRML-------SEICSGNFFTYGLVIDSLCKDGLA 95
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
LKMF EM + G+ + I + I C KL + +++ DE+ + I +VI
Sbjct: 96 IKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQG---IKANVITY 152
Query: 231 -LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+IH C+ +EA + ++ PD + + + + G V E + + K
Sbjct: 153 NSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIK 212
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRS 348
G AP Y + GL + ++ A L EV+V ID N LI G +S
Sbjct: 213 QGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEE 272
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F M + P+++T + L K L + + E++ + +++Y V++
Sbjct: 273 AMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLD 332
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC +G + EA V + +K P + Y+ L+ + A +++D++ G
Sbjct: 333 GLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVP 392
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ TYNI+I+ + G++ A RLF M E G D ++ ++ G QE +Q A E
Sbjct: 393 NIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFL 452
Query: 529 NK 530
+
Sbjct: 453 KR 454
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 177/382 (46%), Gaps = 19/382 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA--KLGQVLSMLDEV 215
++L+ + +G + +AL++FD+M+ G + + +G I NA K Q ++
Sbjct: 13 STLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLI-----NALRKTRQARRAVELH 67
Query: 216 RKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
R+ + + +G+ L+I CK + K+ E+ P+ I Y + +
Sbjct: 68 RRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRV 127
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFI-----LGLIVERRICEAKELGEVIVSGKFTI 329
G + E + + G+ Y I GL E ++ +GE I+
Sbjct: 128 GKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILP----- 182
Query: 330 DDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
D LI +S + A F MI++G P + T ++L LC ++ D V ++
Sbjct: 183 DVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLF 242
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+V+ D+ SYN +++ CTSG+ EA + ++M+ + L P ++ Y L++A +
Sbjct: 243 EVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQN 302
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
+R AK+L++ M G S +L TY +L+ + G IE A+ +F ++ P Y
Sbjct: 303 GRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIY 362
Query: 509 TSLLEGLCQETNLQAAFEVFNK 530
+ L+ G+ Q ++A E+F++
Sbjct: 363 SILIGGMFQARRWESAMEIFDE 384
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%), Gaps = 7/255 (2%)
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPR 347
K G P + G+ E ++ +A EL + + F D + LI ++ R
Sbjct: 2 KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A+ M+ + T + +LCK + + +++++ + ++ Y+ ++
Sbjct: 62 RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+ LC G+LREA + EM +G+ +V YNSL+ A CR L + A + + QM G
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
++ T+ LI S+ G+++ A ++F M+++G AP+ TY SLL GLC + A +
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRL 241
Query: 528 FNKSVNHDVMLARSI 542
F +VM+ R I
Sbjct: 242 F------EVMVERGI 250
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 79/157 (50%)
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
Y ++ + + +V +C G++ +A + +M R G D+ Y L+ A + R A
Sbjct: 5 YQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAV 64
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L +M + CSGN TY ++I + G L++F M+ G+ P+ Y+SL+ GL
Sbjct: 65 ELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGL 124
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
C+ L+ A +F++ V+ + ++ + + CR
Sbjct: 125 CRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCR 161
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 95/197 (48%)
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
++ G P L T+S L K +C K + +E++ ++ + + D+ Y +++ L + +
Sbjct: 1 MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
R A + + M + + Y ++++ C++ L K++ +M G N+ Y+ L
Sbjct: 61 RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I+ VG++ A+ LF M+ +G+ + TY SL+ C+ + A F++ V +
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180
Query: 537 MLARSILSTFMISLCRR 553
+ +T + L ++
Sbjct: 181 LPDVVTFTTLIDHLSKK 197
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 190/456 (41%), Gaps = 47/456 (10%)
Query: 66 LALGFFNWASQ-QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
LAL F++A + P FTH+ +YH+I+ LS +R ++S+L +++ DS +
Sbjct: 67 LALQIFHYAGKYHPAFTHNYDTYHAIIYRLSRARAFEPVESLLLELQ------DSGI--- 117
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNC-EDIGPEICNSLLAVLASDGYIDN---ALKMFDEM 180
NC ED+ + V+ S G ALK F +
Sbjct: 118 -----------------------NCSEDL-------FITVIRSYGLASRPKMALKTFLRI 147
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
GV S + +N + V +L + K + ++ ++I CK
Sbjct: 148 QTFGVRRSVRSLNTLLNALVQNNRFSSV-HLLFKYSKSKFGVVPNVFTCNILIKALCKKN 206
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
VE A KV DE+ P+ + Y + + G + + V + G P Y
Sbjct: 207 DVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYT 266
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK 359
+ G + + R +A ++ + + +D +I G A+ N M+EK
Sbjct: 267 ILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEK 326
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
+P + + LC + E ++++ L + D + ++ +LC G + EA
Sbjct: 327 KYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEA 386
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ E +R G + YN+L+ C L A +LWD M GC N TYN+LI
Sbjct: 387 RKLFNEFER-GTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKG 445
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
F +VG+ + +++ ML+KG + +TY L+EGL
Sbjct: 446 FLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGL 481
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 108/221 (48%), Gaps = 2/221 (0%)
Query: 334 LNALIGSVSSIDPRSAI-VFFNFMIEK-GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
LN L+ ++ + S++ + F + K G VP + T + L K LCK+N + +V+ +
Sbjct: 159 LNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEM 218
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+ ++ +Y ++ + G + A V E+ G PD + Y LM+ ++
Sbjct: 219 PSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRF 278
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A K+ D+M +G N TY ++I + + + AL L ++MLEK P++ +
Sbjct: 279 TDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKV 338
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++ LC E ++ A +++ K + + +I ST + LC+
Sbjct: 339 IDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCK 379
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/523 (21%), Positives = 225/523 (43%), Gaps = 76/523 (14%)
Query: 67 ALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
AL S +P P +SY +++++L R+ +L+ ++ + D Y
Sbjct: 75 ALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYG- 133
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
+LI+G +C+ A+D +D A+++ +EM G
Sbjct: 134 ---TLIRG-----------------------LCD------AAD--VDTAVELLNEMCESG 159
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
+E + + + + +C+ + V + +E+ R + V+ +I C+ +V++
Sbjct: 160 IEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGR--GIEPDVVMYTALIDSLCRHGKVKK 217
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A +V+D + R +P+ + Y ++ GSV E + K + GV P Y I
Sbjct: 218 AARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLIT 277
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSSID-PRSAIVFFNFMIEKGR 361
GL + EA L E ++ G+ + D++ N++I + I R A+ M E G
Sbjct: 278 GLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGC 337
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
L + L L + +K + +E+ ++++ D +Y+++++ C ++ A
Sbjct: 338 RCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAES 397
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM----------FASGCSGNLK 471
+ EM+ +G++P+ Y L++A C + ++ A+ L+++M +++ G K
Sbjct: 398 YLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFK 457
Query: 472 ------------------------TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
TY+I I+ F++ G++ A R+ M G PD
Sbjct: 458 SGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAV 517
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
+ SL++G + + + E+ + DV L I+ST + SL
Sbjct: 518 FDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSL 560
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDME---SYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
LC++ D + + +V+S SY ++ LC R +A G+++ M+ G+
Sbjct: 66 LCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGV 125
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
PDV Y +L+ C + A +L ++M SG N+ Y+ L+ + + G E +
Sbjct: 126 RPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGK 185
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+F M +G+ PD YT+L++ LC+ ++ A V +
Sbjct: 186 VFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMD 223
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 18/218 (8%)
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
S PR A + ++ +GR + L+ + L L E +LSA D
Sbjct: 5 SRTPPRRAAPYLAVLLRRGRGEAAARLNRHLRLL-------PLPESPALLSALPSVRDAV 57
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMK---RKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
SYN +++ LC G L A +++ M R P+ Y +LM A C + A L
Sbjct: 58 SYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLL 117
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
M G ++ TY LI + +++ A+ L + M E G+ P+ Y+ LL G C+
Sbjct: 118 RSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKT 177
Query: 519 TNLQAAFEVF----NKSVNHDVMLARSILSTFMISLCR 552
++ +VF + + DV++ +++ SLCR
Sbjct: 178 GRWESVGKVFEEMSGRGIEPDVVMYTALID----SLCR 211
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
++ A EM H+G+E + + + C+ +GQ + +E+ + N ++ + +
Sbjct: 392 VERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDR--NCKLDAAAYS 449
Query: 230 VLIIHGFCKG-KRVEEAF--KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
+I F G K++ E F ++DE I PD + Y I F G + E VLK+
Sbjct: 450 TMIHGAFKSGEKKIAEEFLKDMIDEGLI----PDAVTYSIPINMFAKSGDLAAAERVLKQ 505
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSID 345
G P + I G + + EL + + +D +++ ++ S+ +SI+
Sbjct: 506 MTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSLGASIE 565
Query: 346 PR---SAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+ ++ F+ I KG V + + N+ + C
Sbjct: 566 GQKLLQSLPGFDTEISKGDVISPHDVMNMLQKHC 599
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 128/540 (23%), Positives = 223/540 (41%), Gaps = 67/540 (12%)
Query: 45 DSLSPSLVARVINPYLLTHHSLALGFFN-------------WASQQPNFTHSPLSYHSIL 91
D L+PSLV+ + L+ +LA F N A + SP +L
Sbjct: 67 DKLTPSLVSTTLLS-LVKTPNLAFNFVNHIDLYRLDFQTQCLAIAVISKLSSPKPVTQLL 125
Query: 92 KSLSLSRQINAIDSVLKQVKVNKITLDSS---VYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
K + SR+ N+I ++ ++ + L++ ++ ++ Q + +A F +K
Sbjct: 126 KEVVTSRK-NSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEK 184
Query: 149 CEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV 208
E CN +L +L+ I+NA + +M ++ + F + I C+ KL +
Sbjct: 185 GFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKA 244
Query: 209 LSMLD--EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
L EV + +++ + + + GF R+E A ++ E++ + +PD Y
Sbjct: 245 KGFLGIMEVFGIKPTIVTYNTL----VQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300
Query: 267 -------------VAEEFKLMGSV------------------------FEREVVLKKKRK 289
V E K +G V + E+V K
Sbjct: 301 ILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMV-----K 355
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRS 348
G+ P Y I GL +E +I A+ L I +D N LI G D +
Sbjct: 356 QGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKK 415
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A + M+ G PT T ++L LC++NK+ E E+++ + D+ N ++
Sbjct: 416 AFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMD 475
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C G + A+ +++EM ++PD YN LM C E A++L +M G
Sbjct: 476 GHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKP 535
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ +YN LIS +S+ G+ + A + ML G P TY +LL+GL + + A E+
Sbjct: 536 DHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELL 595
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 3/207 (1%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+ A F M G PT+ T + L + R + + + + + + DM++YN +
Sbjct: 242 KKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPI 301
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+S++C GR E V++EMK GL PD YN L+ C L A D+M G
Sbjct: 302 LSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGM 358
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
TYN LI +IE A L + EKG+ D+ TY L+ G CQ + + AF
Sbjct: 359 VPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFA 418
Query: 527 VFNKSVNHDVMLARSILSTFMISLCRR 553
+ ++ + + + ++ + LCR+
Sbjct: 419 LHDEMMTDGIQPTQFTYTSLIYVLCRK 445
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 3/196 (1%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M KG P + T + + +C ++ E++ K + D SYN+++ +G
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIG---LVPDSVSYNILIRGCSNNGD 342
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L A+ EM ++G+ P YN+L+ E+ + A+ L ++ G + TYNI
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI+ + + G+ + A L M+ G+ P TYTSL+ LC++ + A E+F K V
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462
Query: 536 VMLARSILSTFMISLC 551
+ +++T M C
Sbjct: 463 MKPDLVMMNTLMDGHC 478
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 97/198 (48%), Gaps = 9/198 (4%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F M EKG P T +++ L + N+ + Y + + +++ ++N+M++
Sbjct: 174 AIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMIN 233
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G+L++A G + M+ G+ P + YN+L++ + A+ + +M + G
Sbjct: 234 VLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQP 293
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+++TYN ++S G LR M E G+ PD+ +Y L+ G +L+ AF
Sbjct: 294 DMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY- 349
Query: 529 NKSVNHDVMLARSILSTF 546
D M+ + ++ TF
Sbjct: 350 -----RDEMVKQGMVPTF 362
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 120/264 (45%), Gaps = 2/264 (0%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y++++ L + +I A + ++++++ I LDS Y +I Q + +KAF++ +E+
Sbjct: 364 TYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEM 423
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ SL+ VL A ++F+++ +G++ + + C +
Sbjct: 424 MTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNM 483
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ S+L E+ S+ V ++ G C + EEA +++ E++ R KPD I+Y
Sbjct: 484 DRAFSLLKEMDMM--SINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYN 541
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + G +V + LG P Y + GL + A+EL + S
Sbjct: 542 TLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSE 601
Query: 326 KFTIDDDVLNALIGSVSSIDPRSA 349
+D ++I ++S++D + +
Sbjct: 602 GIVPNDSSFCSVIEAMSNLDAKKS 625
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 120/513 (23%), Positives = 212/513 (41%), Gaps = 40/513 (7%)
Query: 77 QPNFTHSPLS-YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
+ N H+ + Y+ + + +++ ++K + + D Y +I L +G
Sbjct: 260 KSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRL 319
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
+A +F +++ N N+++ S G D A + + RG S I +
Sbjct: 320 DEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCI 379
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
+ + +LG+ L +E++K ++ N S VLI CK VE AFKV D ++
Sbjct: 380 LTCLGKKGRLGEALRTFEEMKK--DAAPNLSTYNVLI-DMLCKAGEVEAAFKVRDAMKEA 436
Query: 256 ECKPDFIAYRIV------AEEFKLMGSVFE---------REVVLKKK-RKLGVAPRTND- 298
P+ + I+ A++ S+FE EV LG R +D
Sbjct: 437 GLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDA 496
Query: 299 YREF--------------ILGLIVERRICEAKELGEVI----VSGKFTIDDDVLNALIGS 340
YR + LI C KE G I + + D +LNA +
Sbjct: 497 YRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDC 556
Query: 341 V-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
V + + F + +G +P + + S L L K + E E++ + D
Sbjct: 557 VFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLD 616
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+YN + C SG++ +AY +++EMK KG P V Y S+++ + D L A L++
Sbjct: 617 THAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFE 676
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+ ++G N+ Y+ LI F +VG I+ A + +++KG+ P+ T+ LL+ L +
Sbjct: 677 EAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAE 736
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ A F N S + LCR
Sbjct: 737 EINEALVCFQNMKNLKGTPNHITYSILINGLCR 769
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/481 (21%), Positives = 198/481 (41%), Gaps = 39/481 (8%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y++++ + + + S+L++ K Y I+ L + +A F E+
Sbjct: 340 AYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM 399
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
K +D P + N L+ +L G ++ A K+ D M G+ + + + I + C+
Sbjct: 400 K---KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAK 456
Query: 204 KLGQVLSMLDEVRKR---------------------------------ENSMINGSVIAV 230
KL + S+ + + + ++ I +V+
Sbjct: 457 KLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYT 516
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I F K R E+ K+ E+ R C PD + G + + ++ +
Sbjct: 517 SLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSR 576
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G P Y I GL+ E EL + +D N I G S A
Sbjct: 577 GFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKA 636
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
M KGR PT+ T ++ L K ++ DE +++ +N ++ Y+ ++
Sbjct: 637 YQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDG 696
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
GR+ EAY +++E+ +KGL P+V +N L++A + + + A + M + N
Sbjct: 697 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPN 756
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
TY+ILI+ V + A + M ++G+ P+ TYT+++ GL + N+ A +F
Sbjct: 757 HITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFE 816
Query: 530 K 530
+
Sbjct: 817 R 817
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/509 (20%), Positives = 214/509 (42%), Gaps = 47/509 (9%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+P F+ +Y +++ +LS ++ + + ++ Q++ + ++ +I +
Sbjct: 195 RPAFS----AYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLD 250
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
A S+ +E+K NC + N + G +D A K F E+ G+ + + I
Sbjct: 251 AALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMI 310
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C+ +L + + + +++ + N + + +I G+ + +EA+ +L+ + R
Sbjct: 311 GVLCKGNRLDEAVEIFEQMEQNRN--VPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARG 368
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI------------- 303
C P IAY + G + E ++ +K AP + Y I
Sbjct: 369 CIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK-DAAPNLSTYNVLIDMLCKAGEVEAAF 427
Query: 304 --------LGL--------IVERRICEAKELGEV--IVSG---KFTIDDDV----LNALI 338
GL I+ R+C+AK+L E I G K D+V L +
Sbjct: 428 KVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGL 487
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G +D A + M++ ++P ++L K+ K + ++ +++K +
Sbjct: 488 GKQGRVD--DAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSP 545
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D+ N + + +G + + +E+K +G PDV Y+ L+ + R +L+
Sbjct: 546 DLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELF 605
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
M GC + YN I F + G++ A +L M KG P TY S+++GL +
Sbjct: 606 YAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKI 665
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFM 547
L A+ +F ++ ++ + L I S+ +
Sbjct: 666 DRLDEAYMLFEEAKSNGLELNVVIYSSLI 694
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 182/420 (43%), Gaps = 51/420 (12%)
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCED-IGPEICNSLLAVLASDGYIDNALKMFDEMSH 182
+I L + K+ +A S F + + + PE +SLL V+A + D ++ EMS
Sbjct: 97 LVIGVLRRAKDVNQAISYFRWTERKTDQALCPEAYDSLLLVMAKNVKFDYFEQILGEMSI 156
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRV 242
G ST K C + +I K ++
Sbjct: 157 AGFGPST--------KTC-----------------------------IELILSCIKSNKL 179
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL---KKKRKLGVAPRTNDY 299
E F ++ +R + +P F AY + + SV E +++L + ++LG + +
Sbjct: 180 REGFDLIQCMRKFKFRPAFSAYTTL---IGALSSVQESDIMLTLFHQMQELGYEVSVHLF 236
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---GSVSSIDPRSAIVFFNFM 356
I E R+ A L + + S D + N I G +D A FF+ +
Sbjct: 237 TTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVD--MAWKFFHEI 294
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
G +P T +++ LCK N+ DE VE+++ + N +YN M+ ++G+
Sbjct: 295 KSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKF 354
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
EAY +++ K +G P V YN ++ ++ L A + +++M + NL TYN+L
Sbjct: 355 DEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLSTYNVL 413
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I + GE+E A ++ M E G+ P+ T +++ LC+ L A +F + +NH +
Sbjct: 414 IDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIF-EGMNHKI 472
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 163/369 (44%), Gaps = 7/369 (1%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
SL+ G ++ K+F EM HRG ++ + + G+ ++ +E++ R
Sbjct: 517 SLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSR 576
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
I + ++IHG K E +++ ++ + C D AY + F G V
Sbjct: 577 --GFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVN 634
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
+ +L++ + G P Y I GL R+ EA L E S ++ + ++LI
Sbjct: 635 KAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLI 694
Query: 339 ---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
G V ID A + +++KG P + T + L L K + +E + ++ +
Sbjct: 695 DGFGKVGRID--EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLK 752
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ +Y+++++ LC + +A+ QEM+++GL P+ Y +++ + + A
Sbjct: 753 GTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEAS 812
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L+++ A+G + +YN +I S A ++F KG T +LL+ L
Sbjct: 813 SLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDAL 872
Query: 516 CQETNLQAA 524
++ L+ A
Sbjct: 873 QKDECLEQA 881
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 69 GFFNWAS-QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
F W Q+ + ++Y +++ L+ + I S+ ++ K N DS+ Y II
Sbjct: 776 AFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIE 835
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNA 173
L + +A+ +F E + +I + C +LL L D ++ A
Sbjct: 836 GLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQA 881
>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
Length = 697
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/443 (20%), Positives = 201/443 (45%), Gaps = 21/443 (4%)
Query: 81 THSPLS---YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQK 137
++ PL+ Y+++++ + + +L+++K I+ D Y ++ + + +
Sbjct: 254 SNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIES 313
Query: 138 AFSVFNEVKFNCEDIGPEIC-NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
++ E++ +C P +C S+L L + G +++ L F E+S +G + I + I
Sbjct: 314 GMNLIQEME-HCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLI 372
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
F + + +++ E+RK N ++ +I + +I +C+ ++EA K +
Sbjct: 373 HGFLKGHNVKSANNLVHEMRK--NGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDG 430
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
+PD I + +++ G E + + + + + P + Y I L + + +A
Sbjct: 431 LQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAW 490
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSID--------PRSAIVFFNFMIEKGRVPTLSTL 368
E+ V+ D++ ++I + +D P A + M + G P TL
Sbjct: 491 EVLPVMFK------DNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTL 544
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ L KR K + + ++K ++ D ++ ++ C G ++ A+ + ++MKR
Sbjct: 545 TVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKR 604
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
+ P+V Y L++ C+ L A L D M + + ++KTY LI+ + + I+
Sbjct: 605 NNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDR 664
Query: 489 ALRLFHNMLEKGVAPDATTYTSL 511
A +F M +KG PD Y +L
Sbjct: 665 AYEVFDEMKKKGTLPDHIAYLTL 687
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 105/511 (20%), Positives = 215/511 (42%), Gaps = 56/511 (10%)
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
++K + ++ + V Q K + L+ S F++ L +G + S+F+++K
Sbjct: 121 LIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLK--- 177
Query: 150 EDIGPEICNSLLAVLASDGY----------IDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+ GP N + + Y ++ A + +EM +G + + +GV+I
Sbjct: 178 -NSGPSP-NVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGL 235
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
C + + + ++R N +N LI GFC+ R +EA K+L+E++ P
Sbjct: 236 CRVGSIEDAWNKIQDLRS-SNQPLNIYCYNALI-QGFCQKGRPDEALKLLEEMKDEGISP 293
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP------------RT----ND----- 298
D +Y I+ F G + ++++ P RT ND
Sbjct: 294 DIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFF 353
Query: 299 --------------YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
Y I G + + A L + D + +LI
Sbjct: 354 HELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRK 413
Query: 345 DP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ A+ F M++ G P + T +++ C R + +E + + + + +Y
Sbjct: 414 GCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTY 473
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK--KLWDQM 461
+V++++LC + +A+ V+ M + + P V Y ++M+ ++ P K KL+ +M
Sbjct: 474 SVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQ-FKNPMKAWKLYRKM 532
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
GC + T +L+ FS+ G++ AL LF M E+G++ D +T++++G C+ N+
Sbjct: 533 PKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNV 592
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ A+ ++ K ++V + + C+
Sbjct: 593 KRAWSMYKKMKRNNVTPNVKTYTCLVDGFCK 623
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 177/420 (42%), Gaps = 51/420 (12%)
Query: 119 SSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI----CNSLLAVLASDGYIDNAL 174
++V +I K A VF + K IG E+ CN LL LA ++
Sbjct: 115 ATVLSLLIKVFASNKMLADAKDVFMQAK----KIGVELNISSCNFLLKCLAEGDKLEAVR 170
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFC-----ENAKLGQVLSMLDEVRKR-ENSMINGSVI 228
+FD++ + G + + + I +C +N + Q +L+E+ ++ EN + V
Sbjct: 171 SLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTV---VT 227
Query: 229 AVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+ IHG C+ +E+A+ + +LR + Y + + F G E +L++ +
Sbjct: 228 YGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMK 287
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS 348
G++P Y I+ F + D+ S
Sbjct: 288 DEGISPDIYSYS---------------------ILVNAFCTEGDI-------------ES 313
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
+ M + P L +++ L + ++ + + LSA Y D+ SY+ ++
Sbjct: 314 GMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIH 373
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
++ A ++ EM++ GL PD Y SL+ CR+ L+ A K + M G
Sbjct: 374 GFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQP 433
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ T N ++ ++ G+ E AL + M ++ + P++ TY+ ++ LC+ ++ A+EV
Sbjct: 434 DIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVL 493
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 111/268 (41%), Gaps = 9/268 (3%)
Query: 43 LRDSLSPSLVA--RVINPYL-LTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQ 99
L+D L P ++ +++ Y AL + N Q N + +Y I+ L +
Sbjct: 427 LQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQ-NILPNSYTYSVIINWLCKYQA 485
Query: 100 INAIDSVLKQVKVNKITLDSSVYRFIIPSLI-QGKNTQKAFSVFNEV-KFNCEDIGPEIC 157
+ VL + + I Y I+ Q KN KA+ ++ ++ K C+ +
Sbjct: 486 VEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTL- 544
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
L+ + + G + AL +F EM+ G+ F I +C + + SM ++ K
Sbjct: 545 TVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKM-K 603
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R N N L+ GFCK KR++ A ++D+++ PD Y + ++ + ++
Sbjct: 604 RNNVTPNVKTYTCLV-DGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENI 662
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILG 305
V + +K G P Y LG
Sbjct: 663 DRAYEVFDEMKKKGTLPDHIAYLTLGLG 690
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 111/522 (21%), Positives = 212/522 (40%), Gaps = 59/522 (11%)
Query: 39 HQLGLRDSLSPSLVARVINPYLLTHHSLALGFFN----------WAS--QQPNFTHSPLS 86
H L L D + S V P ++ +++L G F W + P + +
Sbjct: 211 HALDLLDEMPRSRV----QPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLAT 266
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y+ +L L + + V +++ N + D Y +I L + + A V++E+
Sbjct: 267 YNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEII 326
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
I + NSL+ G + A K +D G+ + + + I ++ +
Sbjct: 327 KTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVD 385
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ + + D + K + + I +V +IHG C+ +AF + +E R+ + D +Y
Sbjct: 386 EAIELWDLLEK-DVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSS 444
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ +G + + V +K K G P ++ Y I G C+ +
Sbjct: 445 MINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGF------CQVYRTSD------ 492
Query: 327 FTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
A+ ++ M + G PT+ T + L LCK K E
Sbjct: 493 ----------------------AVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASS 530
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
V + + N + D+ +Y ++ L + ++ +A + +++ KGL DV +N L+ C
Sbjct: 531 VAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLC 590
Query: 447 REDLLRPAKKLWDQMF-ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
+ A ++ M C NL TYN L+ E G I+ A L+ ++ E G+ PD
Sbjct: 591 SAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDI 650
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
+Y + ++GLC + ++ D +L+R I+ T +
Sbjct: 651 ISYNTRIKGLCSCDRIHEGIQLL------DEVLSRGIIPTVI 686
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 204/462 (44%), Gaps = 22/462 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++ L+ +++ +L ++ +++ D Y ++ + +K V+++
Sbjct: 194 ITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDK 253
Query: 145 VKFNCEDIG--PEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+ +D G P + N +L L G ++++ M ++ I +G+ I C
Sbjct: 254 L---VKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLC 310
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + + E+ K ++ + + ++ GFC+ RV+EA+K D + +
Sbjct: 311 RSGDVDGAARVYSEIIK--TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-N 367
Query: 261 FIAYRIVAEEFKLMGSVFER-EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL- 318
Y I+ + G V E E+ ++ + P T + I GL +A +
Sbjct: 368 LRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIF 427
Query: 319 GEVIVSGKFTID----DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
E VSGK +D ++N L +D A+ + M + G P + L
Sbjct: 428 EEARVSGK-QLDVFSYSSMINGLCNVGRLVD---AVKVYEKMDKDGCKPNSHIYNALISG 483
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
C+ ++ + V +Y ++ N + +YN ++ LC + + +EA V +EM G PD
Sbjct: 484 FCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPD 543
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
++ Y SL+ + + A +W Q+ G ++ +NILI G+++ AL +F
Sbjct: 544 ITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFS 603
Query: 495 NMLE-KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
+M E K P+ TY +L++GL + + A ++ S+ D
Sbjct: 604 DMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWT-SITED 644
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 178/417 (42%), Gaps = 16/417 (3%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N ++Y ++ L S ++ V ++ + +D+++Y ++ Q Q+A
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA 353
Query: 139 FSVFNEVKF-NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR-GVEFSTIGFGVFI 196
+ ++ F ++ N ++ L G +D A++++D + T+ FG I
Sbjct: 354 WKFWDSAGFAGLRNL--RTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLI 411
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDEL 252
C+N + ++ +E R ++G + V +I+G C R+ +A KV +++
Sbjct: 412 HGLCQNGFANKAFTIFEEAR------VSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKM 465
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
CKP+ Y + F + + + K G +P Y I GL +
Sbjct: 466 DKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKY 525
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
EA + +V FT D +LI G S A+ + ++ KG + + L
Sbjct: 526 QEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNIL 585
Query: 372 SKNLCKRNKSDELVEVYKVL-SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
LC K DE + V+ + + ++ +YN ++ L +G + +A + + G
Sbjct: 586 IHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDG 645
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
L+PD+ YN+ ++ C D + +L D++ + G + T+NIL+ + G I+
Sbjct: 646 LEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/486 (20%), Positives = 205/486 (42%), Gaps = 45/486 (9%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVN----KITLDSSVYRFIIPSLIQGKNTQKAFSV 141
S++++L + +R+ + D+ + +I + Y ++ SL + +A ++
Sbjct: 121 SHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTL 180
Query: 142 FNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
F+ ++ + P+ ++L+ LA +D+AL + DEM V+ + + +
Sbjct: 181 FDSLRR--RQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGC 238
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ + +V+ + D++ K + N + V++ G CK R +E +V + + +P
Sbjct: 239 FKAGEFEKVMRVWDKLVKDPGARPNLATYNVML-DGLCKFGRFKEVGEVWERMVANNLQP 297
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D I Y I+ G V V + K G+ Y + G R+ EA +
Sbjct: 298 DVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW 357
Query: 320 E--------------VIVSGKF---TIDD-----DVLNALIGSVSSIDPRSAIV------ 351
+ +++ G F +D+ D+L + + ++
Sbjct: 358 DSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQN 417
Query: 352 -FFN--FMI-EKGRVP----TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
F N F I E+ RV + + S++ LC + + V+VY+ + + + Y
Sbjct: 418 GFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIY 477
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N ++S C R +A + +M G P V YN+L++ C+ + + A + +M
Sbjct: 478 NALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVE 537
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
+G + ++ TY LI +I+ AL ++ +L KG+ D + L+ GLC +
Sbjct: 538 NGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDE 597
Query: 524 AFEVFN 529
A VF+
Sbjct: 598 ALHVFS 603
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 176/410 (42%), Gaps = 26/410 (6%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSH----RGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
N+LL +A F +SH R + + + + + C L + +++ D
Sbjct: 123 NALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFD 182
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
+R+R+ + + ++ G K R++ A +LDE+ +PD + Y L
Sbjct: 183 SLRRRQ--VAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYN------AL 234
Query: 274 MGSVF---EREVVLKKKRKL----GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+G F E E V++ KL G P Y + GL R E E+ E +V+
Sbjct: 235 LGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANN 294
Query: 327 FTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
D LI G S D A ++ +I+ G V + ++L K C+ + +
Sbjct: 295 LQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGR---VQ 351
Query: 386 EVYKVLSANDY--FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK-GLDPDVSFYNSLM 442
E +K + + ++ +YN+M+ L SG + EA + +++ PD + +L+
Sbjct: 352 EAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLI 411
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
C+ A ++++ SG ++ +Y+ +I+ VG + A++++ M + G
Sbjct: 412 HGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCK 471
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
P++ Y +L+ G CQ A +++K ++ +T + LC+
Sbjct: 472 PNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCK 521
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLF----HNMLEKGVAPDATTYTSLLEGLCQETN 520
GC+ ++++N L+ F A F H + +AP+ TY +L LC +
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173
Query: 521 LQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
L A +F+ V R ST M L ++
Sbjct: 174 LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQ 206
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/480 (22%), Positives = 196/480 (40%), Gaps = 91/480 (18%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNK---ITLDSSV 121
S AL FFNWA Q+ +TH+ SY S+L+ L +R +N + L ++ + L++
Sbjct: 93 SKALQFFNWA-QEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARF 151
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDE 179
+ ++ + + Q++ VF +K + P + NSLL +L G + A K++DE
Sbjct: 152 FNSLMRNFNRAGLFQESIKVFTIMK--SHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDE 209
Query: 180 M-SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
M S GV T F + I FC N
Sbjct: 210 MLSTYGVTPDTFTFNILIRGFCMNG----------------------------------- 234
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK--KKRKLGVAPRT 296
V++ F++ ++L C+PD + Y + + G V V+K K+ + + P
Sbjct: 235 --MVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNV 292
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFM 356
Y I G +R I A+ F M
Sbjct: 293 VTYTTLIRGYCAKREI----------------------------------EKALAVFEEM 318
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT-DMESYNVMVSFLCTSGR 415
+ +G T + L K LC+ K +++ ++ + + + F+ D ++N ++ C +G
Sbjct: 319 VNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGN 378
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF-------ASGCSG 468
L +A V + M + PD + Y++L+ + C+ A+ L D++ GC
Sbjct: 379 LDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKP 438
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ YN + E G+ + A + F ++ +G D +Y +L+ G C+E ++ +E+
Sbjct: 439 LVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELL 497
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 38/218 (17%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P T + L + C D+ ++ LS D+ +YN +V LC +G++ A
Sbjct: 215 GVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVA 274
Query: 420 YGVIQEMKRKGLD--PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
Y V++ M +K +D P+V Y +L+ C + + A ++++M G N TYN LI
Sbjct: 275 YNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLI 334
Query: 478 S------KFSEV------------------------------GEIEGALRLFHNMLEKGV 501
KF ++ G ++ AL++F M E +
Sbjct: 335 KGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKI 394
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
PD+ TY++L+ LCQ + + A ++ +K + ++L+
Sbjct: 395 QPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLS 432
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 66/403 (16%), Positives = 151/403 (37%), Gaps = 54/403 (13%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++++ R+I +V +++ + ++ Y +I L + + +K +
Sbjct: 293 VTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEG 352
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ P+ C N+L+ G +D+ALK+F+ MS ++ + + + C+
Sbjct: 353 TAGD-GTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQG 411
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLI------------------------------ 232
+ +LD++ +R+ +++G L+
Sbjct: 412 GHYEKAEDLLDKLLERK-ILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRG 470
Query: 233 ----------IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
I G CK E +++L + ++ PDF Y + M
Sbjct: 471 TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQ 530
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI----VSGKFTIDDDVLNALI 338
L+K + P ++ + + L+ + R E+ L +++ + + + L
Sbjct: 531 SLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLDKNIRQNLSFSTGCVRLLF 590
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G+ + A + + KG + L + LC K + ++ + F
Sbjct: 591 GAGMN---DKAFQLVHLLYGKGYS---VKMEELIRYLCHCRKVIQGSKLLLFSLESHQFV 644
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
DM+ N ++ LC +L EA+ + ++ G+ +S N L
Sbjct: 645 DMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQQLSCQNQL 687
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 203/479 (42%), Gaps = 13/479 (2%)
Query: 75 SQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKN 134
+Q N T + ++Y ++ + + I+ + VL Q++ + + + II L++
Sbjct: 388 AQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGC 447
Query: 135 TQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYI-----DNALKMFDEMSHRGVEFST 189
KA ++K + I P + + DG+ + AL ++ +M H GVE +
Sbjct: 448 LGKAADYMRKMKDS--GIAPNVVTYGTLI---DGFFKFQGQEAALDVYRDMLHEGVEANN 502
Query: 190 IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVL 249
+ +N + ++ ++ +R ++ V ++ G K + AFKV
Sbjct: 503 FVVDSLVNGLRKNGNIEGAEALFKDMDER--GLLLDHVNYTTLMDGLFKTGNMPAAFKVG 560
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
EL + PD + Y + +G E + LK+ R G+ P Y I E
Sbjct: 561 QELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCRE 620
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTL 368
+ +A +L + + + L+ G + + + A N M G PT T
Sbjct: 621 GKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTH 680
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ + + D ++E+++++ D+ YN +V LC G R A V+ EM
Sbjct: 681 QRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLT 740
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
+G+ PD +N+L+ C+ L A ++ QM G S N+ T+N L+ G I
Sbjct: 741 RGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGE 800
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
A + +M + G+ P+ TY L+ G +++N A ++ + V+ + S ++ M
Sbjct: 801 ADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLM 859
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 201/466 (43%), Gaps = 27/466 (5%)
Query: 56 INPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKI 115
I P ++T+ +L GFF + Q+ +L + R D + + V+ N
Sbjct: 463 IAPNVVTYGTLIDGFFKFQGQE--------------AALDVYR-----DMLHEGVEANNF 503
Query: 116 TLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALK 175
+DS ++ L + N + A ++F ++ + +L+ L G + A K
Sbjct: 504 VVDS-----LVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFK 558
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ E+ + + + + VFI C K + S L E+R + +I
Sbjct: 559 VGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRN--TGLEPDQATYNTMIAA 616
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
C+ + +A K+L E++ KP+ I Y + G V + + +L + G AP
Sbjct: 617 RCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPT 676
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFN 354
+ ++ + RR E+ E+++ D V N L+ + R+A V +
Sbjct: 677 SLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLD 736
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+ +G P T + L CK + D +Y + ++ ++N ++ L ++G
Sbjct: 737 EMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAG 796
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
R+ EA V+ +MK+ GL+P+ Y+ L+ ++ A +L+ +M + G TYN
Sbjct: 797 RIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYN 856
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
L+S F++ G + A LF M +GV ++TY LL G + N
Sbjct: 857 SLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRN 902
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 196/473 (41%), Gaps = 54/473 (11%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+ Y+S++ S +A V++++K + + + Y +I +GK +AFS++
Sbjct: 223 VGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEG 282
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ + + P++ ++L+ L DG A +F EM GV + + + I +
Sbjct: 283 MVRS--GVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKA 340
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+ + L +L E+ R ++ V+ ++ K ++EEA VL + P+F+
Sbjct: 341 RRGSESLGLLGEMVSR--GVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFV 398
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE----- 317
Y ++ + G++ E VL + + V P + I GL+ +R C K
Sbjct: 399 TYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLV--KRGCLGKAADYMR 456
Query: 318 -------------------------------------LGEVIVSGKFTIDDDVLNALIGS 340
L E + + F + D ++N L
Sbjct: 457 KMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVV-DSLVNGL--- 512
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ + A F M E+G + + L L K +V + L + D
Sbjct: 513 RKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDA 572
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
YNV ++ LCT G+ EA ++EM+ GL+PD + YN+++ A CRE A KL +
Sbjct: 573 VVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKE 632
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
M + NL TY L+ E G ++ A L + M G AP + T+ +L+
Sbjct: 633 MKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQ 685
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 170/393 (43%), Gaps = 12/393 (3%)
Query: 167 DGY-----IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
DGY + AL + + M+ +GV +G+ + F + L +++ R + +
Sbjct: 195 DGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVE--RMKADG 252
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
+ V +I +CKGK ++EAF + + + PD + + + G E
Sbjct: 253 VEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAY 312
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL---I 338
+ ++ K+GVAP Y I L RR E+ L +VS +D + AL +
Sbjct: 313 ALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRL 372
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G I+ + P T + L C+ D +V +
Sbjct: 373 GKEGKIEEAKDV--LRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIP 430
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
++ +++ +++ L G L +A +++MK G+ P+V Y +L++ + A ++
Sbjct: 431 NVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVY 490
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
M G N + L++ + G IEGA LF +M E+G+ D YT+L++GL +
Sbjct: 491 RDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKT 550
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
N+ AAF+V + + ++ + + F+ LC
Sbjct: 551 GNMPAAFKVGQELMEKNLSPDAVVYNVFINCLC 583
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 150/374 (40%), Gaps = 36/374 (9%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LA L+ G+ A + EM RGV + + + C +G+ + L E+
Sbjct: 119 NIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEA-AALAEMLV 177
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
R + V+ +I G+CK + + A V++ + + D + Y + F G
Sbjct: 178 RGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGD 237
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
V+++ + GV P Y I C+ K + E
Sbjct: 238 ADAALEVVERMKADGVEPNVVTYTALI------GEYCKGKGMDE---------------- 275
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
A + M+ G +P + TLS L LC+ + E +++ +
Sbjct: 276 ------------AFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGV 323
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ +Y ++ L + R E+ G++ EM +G+ D+ Y +LM+ +E + AK
Sbjct: 324 APNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKD 383
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ + + N TY +L+ G I+GA ++ M EK V P+ T++S++ GL
Sbjct: 384 VLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLV 443
Query: 517 QETNLQAAFEVFNK 530
+ L A + K
Sbjct: 444 KRGCLGKAADYMRK 457
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 124/280 (44%), Gaps = 3/280 (1%)
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D ++Y I G VL + K GV+ ++GL + EA L
Sbjct: 114 DTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALA 173
Query: 320 EVIVSGKFTIDDDVL--NALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
E++V G+ DV+ NALI + D +A+ M +G + ++L
Sbjct: 174 EMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFF 233
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+D +EV + + A+ ++ +Y ++ C + EA+ + + M R G+ PDV
Sbjct: 234 HSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVV 293
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
++L++ CR+ A L+ +M G + N TY LI ++ +L L M
Sbjct: 294 TLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEM 353
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+ +GV D YT+L++ L +E ++ A +V + + ++
Sbjct: 354 VSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNI 393
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 2/145 (1%)
Query: 410 LCTSGRLREAYGVIQEMKR-KGLDP-DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
LC +G + EA + + + R +G+D DV +N+L++ C+ + A + ++M G +
Sbjct: 160 LCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVA 219
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
++ YN L++ F G+ + AL + M GV P+ TYT+L+ C+ + AF +
Sbjct: 220 LDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSL 279
Query: 528 FNKSVNHDVMLARSILSTFMISLCR 552
+ V V+ LS + LCR
Sbjct: 280 YEGMVRSGVLPDVVTLSALVDGLCR 304
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 210/492 (42%), Gaps = 81/492 (16%)
Query: 66 LALGFFNWASQQP-NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
LAL FF+WAS +P + + +++ S+LK L+ R I+ VL+ +K + +
Sbjct: 72 LALKFFDWASTRPFSCSLDGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSA 131
Query: 125 IIPSLIQGKNTQKAFSVFNEVK--FNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEM 180
+I + + + +A +F+ V+ NC P + NSLL L G +D AL+++D+M
Sbjct: 132 LILAYGESGSLDRALQLFHTVREMHNCL---PTVVASNSLLNGLVKSGKVDVALQLYDKM 188
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
+ G G + + + +++ G C
Sbjct: 189 LQ-----TDDGTGAVVDNYTTS----------------------------IVVKGLCNLG 215
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
++EE +++ + + C P + Y ++ + + G + LK+ + GV P Y
Sbjct: 216 KIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYG 275
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKG 360
I G C+A G+F D +L M +G
Sbjct: 276 ALINGF------CKA---------GEFEAVDQLLTE-------------------MAARG 301
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
+ +N+ K + E + ++ D+ +YN M++F C GR++EA
Sbjct: 302 LNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEAD 361
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCRE-DLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+++ K +GL P+ Y LM A C++ D ++ A L+ ++ G +L +Y I
Sbjct: 362 EFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLF-RIAEIGEKPDLVSYGAFIHG 420
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA----FEVFNKSVNHD 535
GEI+ AL + M+EKGV PDA Y L+ GLC+ A E+ +++V D
Sbjct: 421 VVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPD 480
Query: 536 VMLARSILSTFM 547
V + +++ F+
Sbjct: 481 VYVFATLMDGFI 492
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 176/416 (42%), Gaps = 19/416 (4%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
Y II + + Q A E+K E +L+ G + ++ EM+
Sbjct: 239 YNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMA 298
Query: 182 HRGVEFSTIGFGVFI---WKFCENAKLGQVLSMLDEVR-----KRENSMINGSVIAVLII 233
RG+ + F I +K+ K + + + E+ N+MIN S
Sbjct: 299 ARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFS------- 351
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
CKG R++EA + L++ + R P+ +Y + + G + +L + ++G
Sbjct: 352 ---CKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEK 408
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI-VF 352
P Y FI G++V I A + E ++ D + N L+ + A+ +
Sbjct: 409 PDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLL 468
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
+ M+++ P + + L + + DE ++++KV+ + YN M+ C
Sbjct: 469 LSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCK 528
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
G++ +A + +MK PD Y+++++ ++ + A K++ QM N+ T
Sbjct: 529 FGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVIT 588
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
Y LI+ F + ++ A ++F M + P+ TYT+L+ G + + A +F
Sbjct: 589 YTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIF 644
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 167/386 (43%), Gaps = 26/386 (6%)
Query: 167 DGY-----IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
DGY + A + E+ +GV + +G I FC+ + V +L E+ R +
Sbjct: 244 DGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLN 303
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
M N V +I F G V +A + + + C PD Y + G + E +
Sbjct: 304 M-NVKVFNNVIDAEFKYG-LVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEAD 361
Query: 282 VVLKKKRKLGVAPRTNDYR----------EFILGLIVERRICEAKELGEVIVSGKFTIDD 331
L+K ++ G+ P Y +++ + RI E E +++ G F
Sbjct: 362 EFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAF---- 417
Query: 332 DVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
+ G V + A++ M+EKG P + L LCK + + + +
Sbjct: 418 -----IHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEM 472
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+ D+ + ++ +G L EA + + + RKG+DP + YN++++ C+ +
Sbjct: 473 LDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKM 532
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A ++M + + TY+ +I + + ++ AL++F M++ P+ TYTSL
Sbjct: 533 TDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSL 592
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVM 537
+ G C++ ++ A +VF + D++
Sbjct: 593 INGFCKKADMIRAEKVFRGMKSFDLV 618
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 7/227 (3%)
Query: 331 DDVLNALIGSVSSIDPRSAIVFFNFMIEK----GRVPTLSTLSNLSKNLCKRNKSDELVE 386
+ +LN L+ S +D A+ ++ M++ G V T S + K LC K +E
Sbjct: 166 NSLLNGLVKS-GKVD--VALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRR 222
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
+ K + YN+++ C G L+ A ++E+K KG+ P V Y +L+ C
Sbjct: 223 LVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFC 282
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ +L +M A G + N+K +N +I + G + A M E G PD T
Sbjct: 283 KAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDIT 342
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
TY +++ C+ ++ A E K+ ++ + + M + C++
Sbjct: 343 TYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQ 389
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/280 (19%), Positives = 115/280 (41%), Gaps = 17/280 (6%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L+ +G +D A+K+F + +GV+ +G+ I FC+ K+ LS L++++
Sbjct: 486 TLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNV 545
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
++ +I G+ K + A K+ ++ + KP+ I Y + F +
Sbjct: 546 HHA--PDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMI 603
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
E V + + + P Y + G + +A + E+++ +D + LI
Sbjct: 604 RAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLI 663
Query: 339 GSVSSI--------------DPRSAIV-FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+++ + RS I+ FF M+ +G ++ +++ LCK D
Sbjct: 664 NGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDT 723
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ + + D + M+ LC G+ +E +I
Sbjct: 724 AQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNII 763
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 197/442 (44%), Gaps = 10/442 (2%)
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
+L L +R+ + + +++ ++ ++ LD+ ++ +I + +KA F
Sbjct: 1 MLTLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTL--AAFTK 58
Query: 150 EDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
E P +S++ V G + N L M+ +M F + I + ++ +
Sbjct: 59 EGGRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEE 118
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
++ ++ K S ++I R++ K+ + + + C+P+ Y V
Sbjct: 119 ACNVFGDMFKLNVS--PDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSV 176
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
F G V E + ++ + G+ P Y I ++ A + V S F
Sbjct: 177 MHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDF--VGKSRSF 234
Query: 328 TIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
T ++ N+L+ S+ D + + F M KG V T + L + L + +++ +
Sbjct: 235 T-NEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQ 293
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
+Y + ND D+ + N ++ L +GR+ A+ + Q+MK KGL+ D YN L+
Sbjct: 294 LYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLG 353
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
R L A L +M +GC+ N+ TYN LIS + + + A RLF M E+GVAP+
Sbjct: 354 RAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVV 413
Query: 507 TYTSLLEGLCQETNLQAAFEVF 528
+Y+SL+EG + AA +F
Sbjct: 414 SYSSLIEGFGKAGRTDAAISLF 435
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 186/427 (43%), Gaps = 55/427 (12%)
Query: 108 KQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEICNS--LLAVL 164
KQ+ K D + + +I SL + ++A +VF ++ K N + P++ L+ L
Sbjct: 89 KQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLN---VSPDVYTYTILIRSL 145
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
+ G ID +K+F+ M+ +G + + +F +
Sbjct: 146 GTIGRIDAVMKLFESMTAQGCQPN-----LFTYHS------------------------- 175
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
++H F RV+EA + ++ + +PD + Y I+ + F G + +
Sbjct: 176 -------VMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFV 228
Query: 285 KKKRKLGVAPRTND--YREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSV 341
K R TN+ Y + L + I EL G++ G + +++ A++
Sbjct: 229 GKSRSF-----TNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKG--LVSNELTYAILIER 281
Query: 342 SSIDPRSAIVFFNF--MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
R V+ + M++ + T++N+ L K + + E+++ + D
Sbjct: 282 LGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNAD 341
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+YN++++ L +G+L A ++ EM+ G P++ YN+L+ + + L A +L+
Sbjct: 342 TVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFL 401
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M G + N+ +Y+ LI F + G + A+ LF M +G P+ TY L++ L +
Sbjct: 402 EMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAG 461
Query: 520 NLQAAFE 526
AA E
Sbjct: 462 RFGAAME 468
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 5/225 (2%)
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
RR + + L E + + +D + N LI G + ++ ++ F E GR PT
Sbjct: 9 RRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMME-KALQTLAAFTKEGGR-PTAY 66
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T S++ + K + +YK + + D ++N+++ L + ++ EA V +M
Sbjct: 67 TYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDM 126
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
+ + PDV Y L+ + + KL++ M A GC NL TY+ ++ F G +
Sbjct: 127 FKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRV 186
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
+ A +F M++KG+ PDA TY L++ + L+ AF+ KS
Sbjct: 187 DEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKS 231
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 110/216 (50%), Gaps = 4/216 (1%)
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
++ KF D N LI S++ D A F M + P + T + L ++L +
Sbjct: 91 MLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGR 150
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
D ++++++ ++A ++ +Y+ ++ ++GR+ EA + Q+M +KGL PD YN
Sbjct: 151 IDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNI 210
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L++A + L A +D + S N TYN L+S G+I+G + LF M KG
Sbjct: 211 LIDAFGKTGQLERA---FDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKG 267
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+ + TY L+E L ++ ++++ + V++D+
Sbjct: 268 LVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDI 303
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 64/132 (48%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y+ M+ G ++ + ++M + PD + +N L+++ + D + A ++ M
Sbjct: 67 TYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDM 126
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
F S ++ TY ILI +G I+ ++LF +M +G P+ TY S++ +
Sbjct: 127 FKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRV 186
Query: 522 QAAFEVFNKSVN 533
A ++F + V
Sbjct: 187 DEACDIFQQMVQ 198
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 118/281 (41%), Gaps = 22/281 (7%)
Query: 51 LVARVINPYLLTHHSLALGF---------FNWASQQPNFTHSPLSYHSILKSLSLSRQIN 101
+V + + P +T++ L F F++ + +FT+ ++Y+S+L SL I
Sbjct: 196 MVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNE-VTYNSLLSSLGRKGDIQ 254
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF-----NEVKFNCEDIGPEI 156
+ + Q+K + + Y +I L + + ++ N++K++ I
Sbjct: 255 GLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTI---- 310
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
N++L L+ G ++ A ++F +M +G+ T+ + + I KL ++L E+
Sbjct: 311 -NNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEM- 368
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
EN + +I + K + A ++ E++ R P+ ++Y + E F G
Sbjct: 369 -EENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGR 427
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
+ ++ + G P Y I LI R A E
Sbjct: 428 TDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAME 468
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 199/450 (44%), Gaps = 11/450 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK--NTQKAFSVFN 143
+Y +++ +L R + +LK+++ + L +VY F I + G+ +A+ +F
Sbjct: 229 TYSALMVALGKKRDSEMVMVLLKEME--DLGLRPNVYTFTICIRVLGRAGKIDEAYEIFR 286
Query: 144 EVKFNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ + E GP++ L+ L + G ++NA ++F +M G + + + + KF +
Sbjct: 287 --RMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFND 344
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
L ++ + + V +++ CK + +EAF D +R + P+
Sbjct: 345 FGDLDTFKEFWSQMEA--DGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNL 402
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
Y + G + + +L +GV P Y FI +A E E
Sbjct: 403 HTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEK 462
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ + + NA + S++ + R A FN + E G P T + + K K +
Sbjct: 463 MKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQ 522
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
DE V + + N D+ N ++ L +GR+ EA+ + MK L P V YN+
Sbjct: 523 VDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNT 582
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L+ +E ++ A +L++ M CS N ++N L+ F + E+E AL++F M
Sbjct: 583 LLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD 642
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
PD TY +++ GL +E + AF F++
Sbjct: 643 CKPDVLTYNTVIYGLIKENKVNHAFWFFHQ 672
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 211/492 (42%), Gaps = 57/492 (11%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+ ++K S Q++ ++L ++ N D V +I SL + +A+ +F+
Sbjct: 508 VTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDR 567
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+K + P + N+LL+ L +G + A+++F+ M + +TI F + FC+N
Sbjct: 568 MKD--MKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKN 625
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
++ L M ++ + V+ +I+G K +V AF +L+ + PD
Sbjct: 626 DEVELALKMFSKMTVMD---CKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDH 681
Query: 262 IAYRI----------------VAEEF--------------KLMGSVF-----EREVVLKK 286
+ +A +F LMG ++ ++ +
Sbjct: 682 VTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAE 741
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAK-ELGEVIVSGKFTIDDDV------LNALIG 339
+ L R + F++ L+ R +C+ K EL + KFT + N LIG
Sbjct: 742 ELVLNGICRED---SFLIPLV--RVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIG 796
Query: 340 SVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
+ + A F M G P T + L K K EL E+YK + +
Sbjct: 797 ELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKP 856
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D +YN+++S L S L +A ++ P Y L++ + L A +L+
Sbjct: 857 DAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLF 916
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
++M GC N +NILI+ + ++G+ E A +LF M+ +G+ PD +YT L++ LC
Sbjct: 917 EEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLA 976
Query: 519 TNLQAAFEVFNK 530
+ A FN+
Sbjct: 977 GRVDEALYYFNE 988
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 134/288 (46%), Gaps = 13/288 (4%)
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV-----FEREVVL 284
+L +HG K ++ E F++ E+ R CKPD I Y IV ++ F ++V
Sbjct: 829 LLAVHG--KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVS 886
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
R PRT Y I GL R+ EA L E + + + N LI I
Sbjct: 887 SDFRP---TPRT--YGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKI 941
Query: 345 -DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
D +A F M+ +G P L + + L LC + DE + + L + D +Y
Sbjct: 942 GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N +++ L S R+ EA + EM+ +G+ PD+ YNSLM ++ AK++++++
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQL 1061
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
+G ++ TYN LI +S E A ++ NM+ G P+ TY L
Sbjct: 1062 AGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 194/458 (42%), Gaps = 23/458 (5%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +I K+LS+ + + +VL +++ L++ Y +I LIQ +A V+
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYR-- 216
Query: 146 KFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
+ E + P + ++L+ L + + + EM G+ + F + I
Sbjct: 217 RMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAG 276
Query: 204 KLGQVLSMLDEVRKRENSMINGS--VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
K+ + E+ +R + G V ++I C ++E A ++ +++ KPD
Sbjct: 277 KIDEAY----EIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQ 332
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ Y + ++F G + + + G P + + I+ +C+A++ E
Sbjct: 333 VIYITLLDKFNDFGDLDTFKEFWSQMEADGYMP------DVVTFTILVDVLCKARDFDEA 386
Query: 322 IVSGKFTIDDDVL------NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
+ +L N LI G + + A+ + M G PT T
Sbjct: 387 FATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDY 446
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
K ++ + VE ++ + A ++ + N + L GRLREA + ++ GL PD
Sbjct: 447 FGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPD 506
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
YN +M+ + + A L +M +GC ++ N LI + G ++ A ++F
Sbjct: 507 SVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFD 566
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
M + ++P TY +LL GL +E +Q A E+F +
Sbjct: 567 RMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMI 604
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 179/428 (41%), Gaps = 4/428 (0%)
Query: 91 LKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCE 150
++ L + +I+ + +++ D Y +I +L + A +F ++K N
Sbjct: 269 IRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH 328
Query: 151 DIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS 210
I +LL G +D + + +M G + F + + C+ + +
Sbjct: 329 KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFA 388
Query: 211 MLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
D +RK + + N LI G + R+E+A K+LD + +P Y +
Sbjct: 389 TFDVMRK-QGILPNLHTYNTLIC-GLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDY 446
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
F G + +K + G+ P + L R+ EAK + + D
Sbjct: 447 FGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPD 506
Query: 331 DDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
N ++ S + A+ + MI G P + +++L +L K + DE +++
Sbjct: 507 SVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFD 566
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+ + +YN ++S L GR+++A + + M K P+ +N+L++ C+ D
Sbjct: 567 RMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKND 626
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
+ A K++ +M C ++ TYN +I + ++ A FH L+K + PD T
Sbjct: 627 EVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ-LKKSMHPDHVTIC 685
Query: 510 SLLEGLCQ 517
+LL GL +
Sbjct: 686 TLLPGLVK 693
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/485 (18%), Positives = 205/485 (42%), Gaps = 42/485 (8%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
AL +F S+ P H+ + + +L+ L + ++ + +V + ++ I D Y I
Sbjct: 105 ALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIF 164
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVE 186
+L ++ +V N+++ + N L+ +L G+ AL+++ M G++
Sbjct: 165 KALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLK 224
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI-IHGFCKGKRVEEA 245
S + + + V+ +L E+ E+ + +V I I + +++EA
Sbjct: 225 PSLKTYSALMVALGKKRDSEMVMVLLKEM---EDLGLRPNVYTFTICIRVLGRAGKIDEA 281
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
+++ + C PD + Y ++ + G L+ ++L V + N ++
Sbjct: 282 YEIFRRMDDEGCGPDLVTYTVLIDALCNAGQ-------LENAKELFVKMKANGHK----- 329
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTL 365
++ + + KF G + + F++ M G +P +
Sbjct: 330 ---------PDQVIYITLLDKFND--------FGDLDTFKE-----FWSQMEADGYMPDV 367
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
T + L LCK DE + V+ ++ +YN ++ L +GR+ +A ++
Sbjct: 368 VTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDT 427
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
M+ G+ P Y + ++ + A + +++M A G N+ N + +E+G
Sbjct: 428 MESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGR 487
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH----DVMLARS 541
+ A +F+ + E G+APD+ TY +++ + + A + ++ + + DV++ S
Sbjct: 488 LREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNS 547
Query: 542 ILSTF 546
++ +
Sbjct: 548 LIDSL 552
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 100/502 (19%), Positives = 208/502 (41%), Gaps = 43/502 (8%)
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
+S++ SL + +++ + ++K K++ Y ++ L + QKA +F +
Sbjct: 546 NSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIX 605
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
N+LL + ++ ALKMF +M+ + + + I+ + K+
Sbjct: 606 KKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNH 665
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKV----LDELRIRECKP---D 260
+++K SM V ++ G K ++ +A + + ++R R + D
Sbjct: 666 AFWFFHQLKK---SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWED 722
Query: 261 FIAYRIV----------AEEFKLMG--------------------SVFEREVVLKKKRKL 290
+ +V AEE L G ++ ++ K +KL
Sbjct: 723 LMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKL 782
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
G++P Y I L+ +A +L + + + D N L+ +V +
Sbjct: 783 GISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL-AVHGKSGKITE 841
Query: 351 VF--FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
+F + MI + P T + + +L K N D+ ++ + L ++D+ +Y ++
Sbjct: 842 LFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLID 901
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L GRL EA + +EM G P+ + +N L+ + A +L+ +M G
Sbjct: 902 GLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRP 961
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+LK+Y IL+ G ++ AL F+ + G+ PD Y ++ GL + ++ A ++
Sbjct: 962 DLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALY 1021
Query: 529 NKSVNHDVMLARSILSTFMISL 550
N+ N ++ ++ M++L
Sbjct: 1022 NEMRNRGIVPDLYTYNSLMLNL 1043
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 132/554 (23%), Positives = 233/554 (42%), Gaps = 48/554 (8%)
Query: 8 DLATRISQAIIS-ASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSL 66
D+ IS++I + +N P P L++ L SL+ + +IN L+ L
Sbjct: 27 DILYTISESINTIHNNNPNPDYSLNPTLKRIL------PSLTSHHITNLINLNPLSLPPL 80
Query: 67 AL-GFFNWASQQPNFTHSPLSYHSI---LKSLSLSRQINAI------------------- 103
+L FFN+ + +P F H+ +Y ++ L S +L Q +++
Sbjct: 81 SLFSFFNYLASRPPFRHTLHNYSTMAHFLSSHNLLSQTHSLFLFIISKMGHHSSTSLISS 140
Query: 104 --DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLL 161
+V + N L V+ +I + + + A VK N I C+ LL
Sbjct: 141 LIQTVPTHHRHNHSVL---VFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLL 197
Query: 162 A-VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS---MLDEVRK 217
V+ + + + + E+ G + F + + FC K+G V++ + DE+ +
Sbjct: 198 RRVMKLNQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFC---KIGDVMNARMVFDEISR 254
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
R + SV++ +I G+C+ K VEE F + + PD Y +
Sbjct: 255 RG---LRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESR 311
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
V E + + ++G+ P + I G +I A E++ D NA
Sbjct: 312 VEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNA 371
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G D + A N MI G P T + L CK D +E+ +
Sbjct: 372 LINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEG 431
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D ++ ++S LC GR+R+A ++++M G PD Y +++ C++ ++
Sbjct: 432 IELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGA 491
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
KL +M G + TYN L++ F + G+++ A L H ML V P+ T+ LL+G
Sbjct: 492 KLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGH 551
Query: 516 CQETNLQAAFEVFN 529
C+ + F++FN
Sbjct: 552 CKHGS-SVDFKIFN 564
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 112/221 (50%), Gaps = 1/221 (0%)
Query: 333 VLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
+ N L+ I D +A + F+ + +G P++ + + L C+ +E + V+
Sbjct: 228 LFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVM 287
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+ D+ +Y+ +++ LC R+ EA G+ EM GL P+ + +L++ C+ +
Sbjct: 288 ESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKI 347
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A + ++ M G +L TYN LI+ G+++ A +L + M+ G PD T+T+L
Sbjct: 348 DLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTL 407
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++G C++ ++ +A E+ ++ V + L + + LCR
Sbjct: 408 MDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCR 448
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%)
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
P F+ +++ G P + + L CK V+ +S + S+N
Sbjct: 207 PGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNT 266
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++S C S + E + + M+ + + PDV Y++L+ C+E + A L+D+M G
Sbjct: 267 LISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMG 326
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
N T+ LI + G+I+ ALR F M ++G+ PD TY +L+ GLC++ +L+ A
Sbjct: 327 LVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEAR 386
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCR 552
++ N+ + + + +T M C+
Sbjct: 387 KLLNEMIGNGFKPDKITFTTLMDGCCK 413
>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 823
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 118/547 (21%), Positives = 223/547 (40%), Gaps = 89/547 (16%)
Query: 2 TMRPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLR-DSLSPSLVARVINPYL 60
+ R + RI + + + + + W+ +L+ +R +SP + R+ +
Sbjct: 20 SFRSHFPITPRIKKLVSDTVSILKTQQNWSQILDDCFADEEVRFVDISPFVFDRIQDV-- 77
Query: 61 LTHHSLALGFFNWAS--QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLD 118
+ + F+W S ++ F + + S LK L+ R N I+ VL ++ + L
Sbjct: 78 ----EIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARHRIFNEIEDVLGNLRNENVKLT 133
Query: 119 SSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKM 176
++ + + KA +++ V D P++ CN+LL+++ +++A K+
Sbjct: 134 HEALSHVLHAYAESGFLSKAVEIYDYV-VELYDSVPDVIACNALLSLVVKSRRLEDARKV 192
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
+DEM RG + N S +++ G
Sbjct: 193 YDEMCERG-----------------------------------GCVDNYS--TCIMVKGM 215
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
C +VEE K++++ + C P+ + Y + + +G + ++V K+ + G P
Sbjct: 216 CSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTL 275
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFM 356
+ I G C+ G F D +L V R + F N +
Sbjct: 276 ETFGTMINGF------CK---------KGDFVASDRLLE----EVKERGLRVCVWFLNNI 316
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
I+ + + E + + AND D+ +YN++++ LC G+
Sbjct: 317 IDAKY---------------RHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKK 361
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
A G++ E +KGL Y L++A C+ A KL Q+ GC ++ TY IL
Sbjct: 362 EVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGIL 421
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I G ++ A+ + ++++GV+PDA Y L+ GLC+ A +F++
Sbjct: 422 IHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSE------ 475
Query: 537 MLARSIL 543
ML RSIL
Sbjct: 476 MLDRSIL 482
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 134/329 (40%), Gaps = 36/329 (10%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ + I + C+ K +LDE K+ + N S +I +CK K + A K+L +
Sbjct: 348 YNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAP--LIQAYCKSKEYDIASKLLLQ 405
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
L R CKPD + Y I+ + G + + + K GV+P Y + GL R
Sbjct: 406 LAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGR 465
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
AK + F+ M+++ +P + L
Sbjct: 466 FLPAK----------------------------------LLFSEMLDRSILPDAYVYATL 491
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
+ DE +V+ + D+ +N M+ C SG L EA + M + L
Sbjct: 492 IDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL 551
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
PD Y+++++ ++ + A K++ M + C N+ TY LI+ F G+ A
Sbjct: 552 VPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEE 611
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETN 520
F M + + P+ TYT+L+ +E++
Sbjct: 612 TFKEMQSRDLVPNVVTYTTLIRSFAKESS 640
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 153/386 (39%), Gaps = 13/386 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++ G I+NA +F E+ +G + FG I FC+ +L+EV++
Sbjct: 244 NTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKE 303
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR-----ECKPDFIAYRIVAEEFK 272
R G + V ++ K FKV IR +CKPD Y I+
Sbjct: 304 R------GLRVCVWFLNNIIDAK-YRHGFKVDPAESIRWIVANDCKPDIATYNILINRLC 356
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
G +L + K G+ Y I + A +L + D
Sbjct: 357 KEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIV 416
Query: 333 VLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
LI G V S A+ +I++G P + + L LCK + ++ +
Sbjct: 417 TYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEM 476
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
D Y ++ SG EA V KG+ DV +N++++ CR +L
Sbjct: 477 LDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGML 536
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A ++M + TY+ +I + + ++ A+++F +M + P+ TYTSL
Sbjct: 537 DEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSL 596
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVM 537
+ G C + + A E F + + D++
Sbjct: 597 INGFCCQGDFSLAEETFKEMQSRDLV 622
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/432 (19%), Positives = 163/432 (37%), Gaps = 62/432 (14%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKV--NKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
++Y ++ L +S ++ D+V +VK+ ++ D+++Y ++ L + A +F
Sbjct: 416 VTYGILIHGLVVSGHMD--DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLF 473
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+E+ + +L+ G D A K+F +GV+ + I FC +
Sbjct: 474 SEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRS 533
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L + L+ ++ R E ++ II G+ K + + A K+ ++ +CKP+ +
Sbjct: 534 GMLDEALACMN--RMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVV 591
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + F G E K+ + + P Y I E E
Sbjct: 592 TYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLE-------- 643
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
A+ ++ M+ VP T + L + K+
Sbjct: 644 -------------------------KAVYYWELMMTNKCVPNEVTFNCLLQGFVKK---- 674
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
++ + + + +N SFL + MK G + YNS++
Sbjct: 675 ---------TSGRFLGEPDGFNHGQSFL--------FFEFFHRMKSDGWSDHGAAYNSVL 717
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL-FHNMLEKGV 501
C +++ A L D+M G S + ++ ++ F VG + + F N+ EKG+
Sbjct: 718 VCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFRNLDEKGL 777
Query: 502 APDATTYTSLLE 513
A Y+ +LE
Sbjct: 778 EV-AVRYSRVLE 788
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFA-SGCSGNLKTYNILISKFSEVGEIEGALR 491
PDV N+L+ + L A+K++D+M GC N T I++ G++E +
Sbjct: 168 PDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTC-IMVKGMCSEGKVEEGRK 226
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
L + KG P+ Y +++ G C+ +++ A VF + M T + C
Sbjct: 227 LIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFC 286
Query: 552 RR 553
++
Sbjct: 287 KK 288
>gi|242043100|ref|XP_002459421.1| hypothetical protein SORBIDRAFT_02g004410 [Sorghum bicolor]
gi|241922798|gb|EER95942.1| hypothetical protein SORBIDRAFT_02g004410 [Sorghum bicolor]
Length = 735
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 123/517 (23%), Positives = 231/517 (44%), Gaps = 31/517 (5%)
Query: 25 RPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP 84
R ++W P + L +L + PSLVA V+ LAL FF WA +Q F H
Sbjct: 111 RRHQRWGPPVVADLSKL---RRVPPSLVAEVLTARPPPPPPLALPFFLWAGRQKGFRHCF 167
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++H++ LS + A D + ++ + + S ++ + +A
Sbjct: 168 PAFHALASLLSAAGLPAAADQLPDLMRAHGKPVSHSQLTLLVRLHTAARRPLRALHALR- 226
Query: 145 VKFNCE-DIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+F E D+ P++ CN +L LA+ G++++ALK+FDEMS GV+ + F + +
Sbjct: 227 -RFRHEFDVQPQVHACNRVLGALAAAGHVEDALKLFDEMSEGGVQPIPVTFAIVVRALAH 285
Query: 202 NAKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
++L M+ +R R + + +++ ++ G+ G +V +E+ +
Sbjct: 286 AGMTDRLLEMIGRMRNEVCRPDVFVYTALVKTMVRRGYMDG-----CIRVWEEMEKDGVE 340
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD +AY + F G V E + K+ R G+ + Y I G + R+ + L
Sbjct: 341 PDTMAYATMVGGFCNTGMVEEAAELFKEMRSKGLLVARSVYASLIDGYVAAGRVGDGCRL 400
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+ +V D + N LI + I A F ++++ +P+ T+S L L +
Sbjct: 401 LKELVDAGSRADLGIYNTLISGLCGIGREDKAHNLFRIVLQEELMPSSDTVSPL---LAR 457
Query: 378 RNKSDELVEVYKVLS--ANDYFTDMESY-NVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
+ E+V + +++ A +E + M F GR +A V +K K
Sbjct: 458 YAEKGEMVTFFGLVNKLAELGLPVIEMLVDFMKLFAGKDGRELKAMEVFDALKEKQY-CS 516
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK----TYNILISKFSEVGEIEGAL 490
V YN L+E + + + L+++M + S N K TY+ +I F + G +E A
Sbjct: 517 VGIYNILIENLLKIKDRKKSLLLFEEMQS---SVNFKPDSCTYSHMIPCFMDEGNVEEAC 573
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
++ ++++ P + Y +L++GLC+ + AA +
Sbjct: 574 SCYNTVMKENWIPSMSAYCALVKGLCKMGEINAAISL 610
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + + L K + +R D + V++ + + D +Y MV C +G + EA +
Sbjct: 306 PDVFVYTALVKTMVRRGYMDGCIRVWEEMEKDGVEPDTMAYATMVGGFCNTGMVEEAAEL 365
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+EM+ KGL S Y SL++ + +L ++ +G +L YN LIS
Sbjct: 366 FKEMRSKGLLVARSVYASLIDGYVAAGRVGDGCRLLKELVDAGSRADLGIYNTLISGLCG 425
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+G + A LF +L++ + P + T + LL ++ + F + NK
Sbjct: 426 IGREDKAHNLFRIVLQEELMPSSDTVSPLLARYAEKGEMVTFFGLVNK 473
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 93/214 (43%), Gaps = 1/214 (0%)
Query: 335 NALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N ++G++++ A+ F+ M E G P T + + + L +D L+E+ +
Sbjct: 242 NRVLGALAAAGHVEDALKLFDEMSEGGVQPIPVTFAIVVRALAHAGMTDRLLEMIGRMRN 301
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
D+ Y +V + G + V +EM++ G++PD Y +++ C ++
Sbjct: 302 EVCRPDVFVYTALVKTMVRRGYMDGCIRVWEEMEKDGVEPDTMAYATMVGGFCNTGMVEE 361
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A +L+ +M + G Y LI + G + RL +++ G D Y +L+
Sbjct: 362 AAELFKEMRSKGLLVARSVYASLIDGYVAAGRVGDGCRLLKELVDAGSRADLGIYNTLIS 421
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
GLC A +F + ++M + +S +
Sbjct: 422 GLCGIGREDKAHNLFRIVLQEELMPSSDTVSPLL 455
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 150/315 (47%), Gaps = 6/315 (1%)
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRE--CKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+IA ++ GFC+ KR +EA +L R E C PD +Y I+ + G + + +L
Sbjct: 151 IIANHLLKGFCEAKRTDEALDILLH-RTPELGCVPDVFSYSILLKSLCDQGKSGQADDLL 209
Query: 285 KKKRKLGV--APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+ + G +P Y I E + +A +L + +V D ++++ ++
Sbjct: 210 RMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALC 269
Query: 343 SIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
A F M+ KG +P T +NL + E V V+K + + D+
Sbjct: 270 KARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV 329
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+ N+++ LC G+++EA V M KG +PDV Y ++ + L L+D M
Sbjct: 330 TLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLM 389
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G + ++ T+++LI ++ G ++ A+ +F+ M + GV PD TYT+++ LC+ +
Sbjct: 390 LGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKM 449
Query: 522 QAAFEVFNKSVNHDV 536
A E FN+ ++ V
Sbjct: 450 DDAMEKFNQMIDQGV 464
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/479 (20%), Positives = 204/479 (42%), Gaps = 15/479 (3%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
LAL FF + ++ H + R A+D +L + D Y +
Sbjct: 133 LALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSIL 192
Query: 126 IPSLI-QGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSH 182
+ SL QGK+ Q A + + P++ +++ +G ++ A +F EM
Sbjct: 193 LKSLCDQGKSGQ-ADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQ 251
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR----ENSMINGSVIAVLIIHGFCK 238
RG+ + + + C+ +G+ + L ++ + +N N +I+G+
Sbjct: 252 RGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNN------LIYGYSS 305
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
+ +EA +V E+R PD + ++ G + E V G P
Sbjct: 306 TGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 365
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMI 357
Y+ + G + + + +L ++++ D + LI + ++ A++ FN M
Sbjct: 366 YKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMR 425
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+ G P + T + + LC+ K D+ +E + + D +Y+ ++ CT G L
Sbjct: 426 DHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLL 485
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+A +I E+ G+ D+ F++S++ C+ + A+ ++D G + Y++L+
Sbjct: 486 KAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLM 545
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+ VG++E ALR+F M+ G+ P+ Y +L+ G C+ + +F + + +
Sbjct: 546 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 604
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 194/453 (42%), Gaps = 19/453 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y S++ +L +R + ++ L+Q+ + D+ Y +I ++A VF E
Sbjct: 259 VTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKE 318
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ + I P++ N L+ L G I A +FD M+ +G + + + +
Sbjct: 319 MRRH--SILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATK 376
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIA------VLIIHGFCKGKRVEEAFKVLDELRIRE 256
L + + D ++ G IA ++I + +++A + +E+R
Sbjct: 377 GCLVDMTDLFD--------LMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHG 428
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
KPD + Y V +G + + + GVAP Y I G + +AK
Sbjct: 429 VKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAK 488
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
EL I++ +D +++I ++ + A F+ + G+ P S L
Sbjct: 489 ELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGY 548
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C K ++ + V+ + + ++ Y +V+ C GR+ E + +EM +KG+ P
Sbjct: 549 CLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPST 608
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YN +++ PAK + +M SG + N TYNI++ F + + A+ LF
Sbjct: 609 ILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKE 668
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ V D T +++ G+ Q ++ A ++F
Sbjct: 669 LRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 701
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 138/299 (46%), Gaps = 34/299 (11%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I G CK + A ++++E++I+ C+P+ I Y I+ + F G + E VL + G
Sbjct: 20 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 79
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
+A Y I L + ++ D LN + G +SS
Sbjct: 80 LALNAVGYNCLISALCKDEKV------------------QDALN-MFGDMSS-------- 112
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
KG P + T ++L LCK NK +E + +Y+ + + +YN ++
Sbjct: 113 -------KGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFL 165
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
G ++EA ++ +M +G D YN L++A CR + L++ M + G + N
Sbjct: 166 RRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNI 225
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ NILI+ G I+ AL +M+ +G+ PD TY SL+ GLC+ Q A +F+K
Sbjct: 226 SCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDK 284
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 165/340 (48%), Gaps = 9/340 (2%)
Query: 153 GPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS 210
GP+I N+L+ L GY+ +A ++ +EM +G E + I + + I +FC+ +L + +
Sbjct: 11 GPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARN 70
Query: 211 MLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
+LDE+ + ++ +V +I CK ++V++A + ++ + CKPD + +
Sbjct: 71 VLDEMSGKGLAL--NAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLI-- 126
Query: 271 FKLMG-SVFEREVVLKKKRKL-GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFT 328
F L + FE + L + L GV T Y I + + EA +L ++
Sbjct: 127 FGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCP 186
Query: 329 IDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
+DD N LI ++ + + + F M+ KG P + + L LC+ +E
Sbjct: 187 LDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEF 246
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
+ + D+ +YN +++ LC +GR +EA + +++ +G+ PD YN+L+ C+
Sbjct: 247 LRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCK 306
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
E + A L + SG N T+ IL+S F + G+ E
Sbjct: 307 EGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%)
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
SA N M KG P + T + L CK + +E V +S + YN ++
Sbjct: 32 SARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLI 91
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
S LC ++++A + +M KG PD+ +NSL+ C+ + A L+ M G
Sbjct: 92 SALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI 151
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
N TYN LI F G ++ AL+L ++ML +G D TY L++ LC+ N++ +
Sbjct: 152 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLAL 211
Query: 528 FNKSVNHDVMLARSILSTFMISLCR 552
F ++ + + + LCR
Sbjct: 212 FEDMMSKGLNPNNISCNILINGLCR 236
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 13/270 (4%)
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSG------KFTIDDDVLNALIGSVS 342
+G P Y ILGL + + A+EL E+ + G +TI +++
Sbjct: 8 VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTI---LIDRFCKEGR 64
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
+ R+ + + M KG + L LCK K + + ++ +S+ D+ +
Sbjct: 65 LEEARNVL---DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 121
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+N ++ LC + EA G+ Q+M +G+ + YN+L+ A R ++ A KL + M
Sbjct: 122 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 181
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
GC + TYN LI G IE L LF +M+ KG+ P+ + L+ GLC+ N+Q
Sbjct: 182 FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 241
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A E ++ + ++ + LC+
Sbjct: 242 HALEFLRDMIHRGLTPDIVTYNSLINGLCK 271
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M+ G P + T + L LCK+ E+ + ++ +Y +++ C GR
Sbjct: 5 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L EA V+ EM KGL + YN L+ A C+++ ++ A ++ M + GC ++ T+N
Sbjct: 65 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI +V + E AL L+ +ML +GV + TY +L+ + +Q A ++ N +
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184
Query: 536 VMLARSILSTFMISLCR 552
L + + +LCR
Sbjct: 185 CPLDDITYNGLIKALCR 201
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D+ +YN ++ LC G L A ++ EM+ KG +P+V Y L++ C+E L A+ +
Sbjct: 13 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 72
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
D+M G + N YN LIS + +++ AL +F +M KG PD T+ SL+ GLC+
Sbjct: 73 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 132
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ A ++ + V+ +T + + RR
Sbjct: 133 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRR 167
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%)
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+ M G PD+ YN+L+ C++ L A++L ++M GC N+ TY ILI +F +
Sbjct: 3 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
G +E A + M KG+A +A Y L+ LC++ +Q A +F
Sbjct: 63 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 107
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ + M + GC ++ TYN LI + G + A L + M KG P+ TYT L++ C
Sbjct: 1 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+E L+ A V ++ + L + + +LC+
Sbjct: 61 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCK 96
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 111/522 (21%), Positives = 212/522 (40%), Gaps = 59/522 (11%)
Query: 39 HQLGLRDSLSPSLVARVINPYLLTHHSLALGFFN----------WAS--QQPNFTHSPLS 86
H L L D + S V P ++ +++L G F W + P + +
Sbjct: 211 HALDLLDEMPRSGV----QPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLAT 266
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y+ +L L + + V +++ N + D Y +I L + + A V++E+
Sbjct: 267 YNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEII 326
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
I + NSL+ G + A K +D G+ + + + I ++ +
Sbjct: 327 KTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVD 385
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ + + D + K + + I +V +IHG C+ +AF + +E R+ + D +Y
Sbjct: 386 EAIELWDLLEK-DVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSS 444
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ +G + + V +K K G P ++ Y I G C+ +
Sbjct: 445 MINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGF------CQVYRTSD------ 492
Query: 327 FTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
A+ ++ M + G PT+ T + L LCK K E
Sbjct: 493 ----------------------AVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASS 530
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
V + + N + D+ +Y ++ L + ++ +A + +++ KGL DV +N L+ C
Sbjct: 531 VAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLC 590
Query: 447 REDLLRPAKKLWDQMF-ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
+ A ++ M C NL TYN L+ E G I+ A L+ ++ E G+ PD
Sbjct: 591 SAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDI 650
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
+Y + ++GLC + ++ D +L+R I+ T +
Sbjct: 651 ISYNTRIKGLCSCDRIHEGIQLL------DEVLSRGIIPTVI 686
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 203/462 (43%), Gaps = 22/462 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y +++ L+ +++ +L ++ + + D Y ++ + +K V+++
Sbjct: 194 ITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDK 253
Query: 145 VKFNCEDIG--PEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+ +D G P + N +L L G ++++ M ++ I +G+ I C
Sbjct: 254 L---VKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLC 310
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + + E+ K ++ + + ++ GFC+ RV+EA+K D + +
Sbjct: 311 RSGDVDGAARVYSEIIK--TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-N 367
Query: 261 FIAYRIVAEEFKLMGSVFER-EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL- 318
Y I+ + G V E E+ ++ + P T + I GL +A +
Sbjct: 368 LRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIF 427
Query: 319 GEVIVSGKFTID----DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
E VSGK +D ++N L +D A+ + M + G P + L
Sbjct: 428 EEARVSGK-QLDVFSYSSMINGLCNVGRLVD---AVKVYEKMDKDGCKPNSHIYNALISG 483
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
C+ ++ + V +Y ++ N + +YN ++ LC + + +EA V +EM G PD
Sbjct: 484 FCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPD 543
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
++ Y SL+ + + A +W Q+ G ++ +NILI G+++ AL +F
Sbjct: 544 ITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFS 603
Query: 495 NMLE-KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
+M E K P+ TY +L++GL + + A ++ S+ D
Sbjct: 604 DMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWT-SITED 644
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 101/486 (20%), Positives = 206/486 (42%), Gaps = 45/486 (9%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVN----KITLDSSVYRFIIPSLIQGKNTQKAFSV 141
S++++L + +R+ + D+ + +I + Y ++ SL + +A ++
Sbjct: 121 SHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTL 180
Query: 142 FNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
F+ ++ + P+ ++L+ LA +D+AL + DEM GV+ + + +
Sbjct: 181 FDSLRR--RQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGC 238
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ + +V+ + D++ K + N + V++ G CK R +E +V + + +P
Sbjct: 239 FKAGEFEKVMRVWDKLVKDPGARPNLATYNVML-DGLCKFGRFKEVGEVWERMVANNLQP 297
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D I Y I+ G V V + K G+ Y + G R+ EA +
Sbjct: 298 DVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW 357
Query: 320 E--------------VIVSGKF---TIDD-----DVLNALIGSVSSIDPRSAIV------ 351
+ +++ G F +D+ D+L + + ++
Sbjct: 358 DSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQN 417
Query: 352 -FFN--FMI-EKGRVP----TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
F N F I E+ RV + + S++ LC + + V+VY+ + + + Y
Sbjct: 418 GFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIY 477
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N ++S C R +A + +M G P V YN+L++ C+ + + A + +M
Sbjct: 478 NALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVE 537
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
+G + ++ TY LI +I+ AL ++ +L KG+ D + L+ GLC +
Sbjct: 538 NGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDE 597
Query: 524 AFEVFN 529
A VF+
Sbjct: 598 ALHVFS 603
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 178/417 (42%), Gaps = 16/417 (3%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N ++Y ++ L S ++ V ++ + +D+++Y ++ Q Q+A
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA 353
Query: 139 FSVFNEVKF-NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR-GVEFSTIGFGVFI 196
+ ++ F ++ N ++ L G +D A++++D + T+ FG I
Sbjct: 354 WKFWDSAGFAGLRNL--RTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLI 411
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDEL 252
C+N + ++ +E R ++G + V +I+G C R+ +A KV +++
Sbjct: 412 HGLCQNGFANKAFTIFEEAR------VSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKM 465
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
CKP+ Y + F + + + K G +P Y I GL +
Sbjct: 466 DKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKY 525
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
EA + +V FT D +LI G S A+ + ++ KG + + L
Sbjct: 526 QEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNIL 585
Query: 372 SKNLCKRNKSDELVEVYKVL-SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
LC K DE + V+ + + ++ +YN ++ L +G + +A + + G
Sbjct: 586 IHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDG 645
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
L+PD+ YN+ ++ C D + +L D++ + G + T+NIL+ + G I+
Sbjct: 646 LEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 176/410 (42%), Gaps = 26/410 (6%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSH----RGVEFSTIGFGVFIWKFCENAKLGQVLSMLD 213
N+LL +A F +SH R + + + + + C L + +++ D
Sbjct: 123 NALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFD 182
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
+R+R+ + + ++ G K R++ A +LDE+ +PD + Y L
Sbjct: 183 SLRRRQ--VAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYN------AL 234
Query: 274 MGSVF---EREVVLKKKRKL----GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+G F E E V++ KL G P Y + GL R E E+ E +V+
Sbjct: 235 LGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANN 294
Query: 327 FTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
D LI G S D A ++ +I+ G V + ++L K C+ + +
Sbjct: 295 LQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGR---VQ 351
Query: 386 EVYKVLSANDY--FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK-GLDPDVSFYNSLM 442
E +K + + ++ +YN+M+ L SG + EA + +++ PD + +L+
Sbjct: 352 EAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLI 411
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
C+ A ++++ SG ++ +Y+ +I+ VG + A++++ M + G
Sbjct: 412 HGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCK 471
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
P++ Y +L+ G CQ A +++K ++ +T + LC+
Sbjct: 472 PNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCK 521
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 199/450 (44%), Gaps = 11/450 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK--NTQKAFSVFN 143
+Y +++ +L R + +LK+++ + L +VY F I + G+ +A+ +F
Sbjct: 229 TYSALMVALGKKRDSEMVMVLLKEME--DLGLRPNVYTFTICIRVLGRAGKIDEAYEIFR 286
Query: 144 EVKFNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ + E GP++ L+ L + G ++NA ++F +M G + + + + KF +
Sbjct: 287 --RMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFND 344
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
L ++ + + V +++ CK + +EAF D +R + P+
Sbjct: 345 FGDLDTFKEFWSQMEA--DGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNL 402
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
Y + G + + +L +GV P Y FI +A E E
Sbjct: 403 HTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEK 462
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ + + NA + S++ + R A FN + E G P T + + K K +
Sbjct: 463 MKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQ 522
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
DE V + + N D+ N ++ L +GR+ EA+ + MK L P V YN+
Sbjct: 523 VDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNT 582
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L+ +E ++ A +L++ M CS N ++N L+ F + E+E AL++F M
Sbjct: 583 LLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD 642
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
PD TY +++ GL +E + AF F++
Sbjct: 643 CKPDVLTYNTVIYGLIKENKVNHAFWFFHQ 672
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/486 (22%), Positives = 200/486 (41%), Gaps = 38/486 (7%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +I K+LS+ + + +VL +++ L++ Y +I LIQ +A V+ +
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRM 218
Query: 146 KFN-------------------------------CEDIG--PEICNSLLA--VLASDGYI 170
ED+G P + + VL G I
Sbjct: 219 VSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKI 278
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D A ++F M G + + V I C +L + V+ + N VI +
Sbjct: 279 DEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELF--VKMKANGHKPDQVIYI 336
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++ F ++ + ++ PD + + I+ + E RK
Sbjct: 337 TLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQ 396
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPRSA 349
G+ P + Y I GL+ RI +A +L + S N I S + A
Sbjct: 397 GILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKA 456
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ F M KG VP + + +L + + E ++ L N D +YN+M+
Sbjct: 457 VETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKC 516
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
G++ EA ++ EM R G +PDV NSL+++ + + A +++D+M S
Sbjct: 517 YSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPT 576
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ TYN L+S + G ++ A+ LF +M+EK +P+ ++ +LL+ C+ ++ A ++F+
Sbjct: 577 VVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFS 636
Query: 530 KSVNHD 535
K D
Sbjct: 637 KMTVMD 642
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 211/492 (42%), Gaps = 57/492 (11%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+ ++K S Q++ ++L ++ N D V +I SL + +A+ +F+
Sbjct: 508 VTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDR 567
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+K + P + N+LL+ L +G + A+++F+ M + +TI F + FC+N
Sbjct: 568 MKD--MKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKN 625
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
++ L M ++ + V+ +I+G K +V AF +L+ + PD
Sbjct: 626 DEVELALKMFSKMTVMD---CKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDH 681
Query: 262 IAYRI----------------VAEEF--------------KLMGSVF-----EREVVLKK 286
+ +A +F LMG ++ ++ +
Sbjct: 682 VTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAE 741
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAK-ELGEVIVSGKFTIDDDV------LNALIG 339
+ L R + F++ L+ R +C+ K EL + KFT + N LIG
Sbjct: 742 ELVLNGICRED---SFLIPLV--RVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIG 796
Query: 340 SVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
+ + A F M G P T + L K K EL E+YK + +
Sbjct: 797 ELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKP 856
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D +YN+++S L S L +A ++ P Y L++ + L A +L+
Sbjct: 857 DAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLF 916
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
++M GC N +NILI+ + ++G+ E A +LF M+ +G+ PD +YT L++ LC
Sbjct: 917 EEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLA 976
Query: 519 TNLQAAFEVFNK 530
+ A FN+
Sbjct: 977 GRVDEALYYFNE 988
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 134/288 (46%), Gaps = 13/288 (4%)
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV-----FEREVVL 284
+L +HG K ++ E F++ E+ R CKPD I Y IV ++ F ++V
Sbjct: 829 LLAVHG--KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVS 886
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
R PRT Y I GL R+ EA L E + + + N LI I
Sbjct: 887 SDFRP---TPRT--YGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKI 941
Query: 345 -DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
D +A F M+ +G P L + + L LC + DE + + L + D +Y
Sbjct: 942 GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N +++ L S R+ EA + EM+ +G+ PD+ YNSLM ++ AK++++++
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQL 1061
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
+G ++ TYN LI +S E A ++ NM+ G P+ TY L
Sbjct: 1062 AGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 179/428 (41%), Gaps = 4/428 (0%)
Query: 91 LKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCE 150
++ L + +I+ + +++ D Y +I +L + A +F ++K N
Sbjct: 269 IRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH 328
Query: 151 DIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS 210
I +LL G +D + + +M G + F + + C+ + +
Sbjct: 329 KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFA 388
Query: 211 MLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
D +RK + + N LI G + R+E+A K+L + +P Y I +
Sbjct: 389 TFDVMRK-QGILPNLHTYNTLIC-GLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDY 446
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
F G + +K + G+ P + L R+ EAK + + D
Sbjct: 447 FGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPD 506
Query: 331 DDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
N ++ S + A+ + MI G P + +++L +L K + DE +++
Sbjct: 507 SVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFD 566
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+ + +YN ++S L GR+++A + + M K P+ +N+L++ C+ D
Sbjct: 567 RMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKND 626
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
+ A K++ +M C ++ TYN +I + ++ A FH L+K + PD T
Sbjct: 627 EVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ-LKKSMHPDHVTIC 685
Query: 510 SLLEGLCQ 517
+LL GL +
Sbjct: 686 TLLPGLVK 693
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 131/303 (43%), Gaps = 40/303 (13%)
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+VE+ V + ++ + + D Y + + + G + + VL K RK G Y
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKG 360
I L+++ C GE A+ + M+ +G
Sbjct: 197 GLI-HLLIQSGFC-----GE----------------------------ALEVYRRMVSEG 222
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P+L T S L L K+ S+ ++ + K + ++ ++ + + L +G++ EAY
Sbjct: 223 LKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAY 282
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+ + M +G PD+ Y L++A C L AK+L+ +M A+G + Y L+ KF
Sbjct: 283 EIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKF 342
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
++ G+++ + M G PD T+T L++ LC+ + AF F DVM +
Sbjct: 343 NDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATF------DVMRKQ 396
Query: 541 SIL 543
IL
Sbjct: 397 GIL 399
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 102/505 (20%), Positives = 211/505 (41%), Gaps = 49/505 (9%)
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE-VK 146
+S++ SL + +++ + ++K K++ Y ++ L + QKA +F ++
Sbjct: 546 NSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIE 605
Query: 147 FNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
C P N+LL + ++ ALKMF +M+ + + + I+ + K
Sbjct: 606 KKCS---PNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENK 662
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKV----LDELRIRECKP- 259
+ +++K SM V ++ G K ++ +A + + ++R R +
Sbjct: 663 VNHAFWFFHQLKK---SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSF 719
Query: 260 --DFIAYRIV----------AEEFKLMG--------------------SVFEREVVLKKK 287
D + +V AEE L G ++ ++ K
Sbjct: 720 WEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFT 779
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR 347
+KLG++P Y I L+ +A +L + + + D N L+ +V +
Sbjct: 780 KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL-AVHGKSGK 838
Query: 348 SAIVF--FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
+F + MI + P T + + +L K N D+ ++ + L ++D+ +Y
Sbjct: 839 ITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGP 898
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++ L GRL EA + +EM G P+ + +N L+ + A +L+ +M G
Sbjct: 899 LIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEG 958
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+LK+Y IL+ G ++ AL F+ + G+ PD Y ++ GL + ++ A
Sbjct: 959 IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018
Query: 526 EVFNKSVNHDVMLARSILSTFMISL 550
++N+ N ++ ++ M++L
Sbjct: 1019 ALYNEMRNRGIVPDLYTYNSLMLNL 1043
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 105/249 (42%), Gaps = 42/249 (16%)
Query: 321 VIVSGKFTI---DDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRV-PTLSTLSNLSKNLC 376
++V GK I +D+VL L S DP A+ +F + E V T T + + + L
Sbjct: 77 MVVKGKTEIRVSEDEVLGVL---KSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLR 133
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+K +++ V++ + D+++Y + L G LR+ V+ +M++ G +
Sbjct: 134 VHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAY 193
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN---------------------- 474
YN L+ + A +++ +M + G +LKTY+
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM 253
Query: 475 -------------ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
I I G+I+ A +F M ++G PD TYT L++ LC L
Sbjct: 254 EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQL 313
Query: 522 QAAFEVFNK 530
+ A E+F K
Sbjct: 314 ENAKELFVK 322
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 169/372 (45%), Gaps = 10/372 (2%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L + G+++ A+ +FD+M G+ I F I C G+VL V K
Sbjct: 197 ALFGYMVETGFLE-AVALFDQMVEIGLTPVVITFNTLINGLCLE---GRVLEAAALVNKM 252
Query: 219 ENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ V+ I++G CK + A +L ++ KPD + Y + + G
Sbjct: 253 VGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHH 312
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ + + + + G+AP Y I G R +A+ L ++ + D NAL
Sbjct: 313 SDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNAL 372
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I SV A + M+ + P T +++ CK N+ D+ ++ ++++ D
Sbjct: 373 ISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDV 432
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
T +N ++ C + R+ E +++E+ R+GL + + YN+L+ C D L A+
Sbjct: 433 VT----FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L+ +M + G + T NIL+ F E ++E AL LF + + D Y ++ G+C
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 517 QETNLQAAFEVF 528
+ + + A+++F
Sbjct: 549 KGSKVDEAWDLF 560
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 210/475 (44%), Gaps = 18/475 (3%)
Query: 38 LHQLGLRDSLSPSLVARVINPYLLTHHSL-ALGFFNWASQQPNFTHSPLSYHSILKSLSL 96
LH L L D +S +L + Y++ L A+ F+ + T +++++++ L L
Sbjct: 183 LHGLCLEDRISEALA---LFGYMVETGFLEAVALFDQMVE-IGLTPVVITFNTLINGLCL 238
Query: 97 SRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE- 155
++ +++ ++ + +D Y I+ + + +T+ A ++ ++++ I P+
Sbjct: 239 EGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET--HIKPDV 296
Query: 156 -ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
I ++++ L DG+ +A +F EM +G+ + + I FC + +L +
Sbjct: 297 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 356
Query: 215 VRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
+ +RE IN V+ +I K ++ EA K+ DE+ R PD + Y + F
Sbjct: 357 MIERE---INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF-- 411
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
R K L +P + I +R+ E +L I +
Sbjct: 412 --CKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 334 LNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
N LI +D +A F MI G P T + L C+ K +E +E+++V+
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ D +YN+++ +C ++ EA+ + + G++PDV YN ++ C + +
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
A L+ +M +G + TYN LI + GEI+ ++ L M G + DA T
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 132/312 (42%), Gaps = 25/312 (8%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I F + R + A + ++ IR + ++ I+ + F + K KLG
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
P + + GL +E RI EA AL G + A+
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEAL-------------------ALFGYMVETGFLEAVA 212
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F+ M+E G P + T + L LC + E + + D+ +Y +V+ +C
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
G + A ++ +M+ + PDV Y+++++ C++ A+ L+ +M G + N+
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
TYN +I F G A RL +M+E+ + PD T+ +L+ +E L A ++
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC--- 389
Query: 532 VNHDVMLARSIL 543
D ML R I
Sbjct: 390 ---DEMLHRCIF 398
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 97/219 (44%), Gaps = 15/219 (6%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI FF++M+ T + + + N+ D + +Y+ + ++ S+N+++
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR---------------P 453
C +L + ++ + G PDV +N+L+ C ED +
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE 209
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A L+DQM G + + T+N LI+ G + A L + M+ KG+ D TY +++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 514 GLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
G+C+ + ++A + +K + I S + LC+
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCK 308
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 153/334 (45%), Gaps = 12/334 (3%)
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRE--CKPDFIAYRIVAEEFKLMGSVFEREVV 283
++IA ++ GFC+ KR +EA +L R E C PD +Y I+ + G + + +
Sbjct: 148 AIIASHLLKGFCEAKRTDEALDILLH-RTPELGCVPDVFSYNILLKSLCNQGKSGQADDL 206
Query: 284 LKKKRKLGV--APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID----DDVLNAL 337
L+ + G +P Y I G E + +A +L + +V D V++AL
Sbjct: 207 LRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHAL 266
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
++D A F M+ KG +P T +NL + E V V+K +
Sbjct: 267 C-KARAMDKAEA--FLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSIL 323
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D+ + N ++ LC G+++EA V M KG +PDV Y ++ + L L
Sbjct: 324 PDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDL 383
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+D M G + + T+N+LI ++ G ++ A+ +F+ M + GV P TY +++ LC+
Sbjct: 384 FDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCR 443
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+ A E FN+ ++ V+ + + C
Sbjct: 444 IGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFC 477
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/480 (21%), Positives = 202/480 (42%), Gaps = 17/480 (3%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
LAL FF + + ++ H + R A+D +L + D Y +
Sbjct: 131 LALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNIL 190
Query: 126 IPSLI-QGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSH 182
+ SL QGK+ Q A + + P++ N+++ +G ++ A +F EM
Sbjct: 191 LKSLCNQGKSGQ-ADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 249
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-----IIHGFC 237
RG+ + + + C+ + + + L + M+N V+ +I+G+
Sbjct: 250 RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQ-------MVNKGVLPDNWTYNNLIYGYS 302
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
+ +EA +V E+R + PD +A + G + E V G P
Sbjct: 303 STGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 362
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFM 356
Y + G + + + +L ++++ N LI + ++ A++ FN M
Sbjct: 363 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM 422
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
+ G P + T + LC+ K D+ +E + + D +Y+ ++ CT G L
Sbjct: 423 RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSL 482
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
+A +I E+ G+ D+ F+ S++ C+ + A+ ++D G + YN+L
Sbjct: 483 LKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNML 542
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+ + VG++E ALR+F M+ G+ P+ Y +L+ G C+ + +F + + +
Sbjct: 543 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGI 602
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 190/440 (43%), Gaps = 17/440 (3%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV--YRFIIPSLIQGKNTQKAFSVF 142
SY+ +LKSL + D +L+ + V Y +I + + KA +F
Sbjct: 185 FSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLF 244
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E+ I P++ +S++ L +D A +M ++GV + I+ +
Sbjct: 245 KEMVQ--RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYS 302
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG-FCKGKRVEEAFKVLDELRIRECKP 259
+ + + + E+R++ I V+A+ + G CK +++EA V D + ++ P
Sbjct: 303 STGQWKEAVRVFKEMRRQS---ILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNP 359
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL----IVERRICEA 315
D +Y I+ + G + + + G+AP + I ++++ +
Sbjct: 360 DVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIF 419
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
E+ + V V+ AL + +D A+ FN MI++G VP L +
Sbjct: 420 NEMRDHGVKPHVVTYMTVIAALC-RIGKMD--DAMEKFNQMIDQGVVPDKYAYHCLIQGF 476
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C + E+ + N D+ + +++ LC GR+ +A + GL PD
Sbjct: 477 CTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA 536
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YN LM+ C + A +++D M ++G N+ Y L++ + ++G I+ L LF
Sbjct: 537 VVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFRE 596
Query: 496 MLEKGVAPDATTYTSLLEGL 515
ML+KG+ P Y +++GL
Sbjct: 597 MLQKGIKPSTILYNIIIDGL 616
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/515 (20%), Positives = 217/515 (42%), Gaps = 31/515 (6%)
Query: 55 VINPYLLTHHSLALGFF-----NWASQ------QPNFTHSPLSYHSILKSLSLSRQINAI 103
V +P ++ ++++ GFF N A Q ++Y S++ +L +R ++
Sbjct: 216 VCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKA 275
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLL 161
++ L+Q+ + D+ Y +I ++A VF E++ + I P++ N+L+
Sbjct: 276 EAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRR--QSILPDVVALNTLM 333
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
L G I A +FD M+ +G + + + + L + + D
Sbjct: 334 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD-------- 385
Query: 222 MINGSVIAVLI------IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
++ G IA +I I + +++A + +E+R KP + Y V +G
Sbjct: 386 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIG 445
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ + + GV P Y I G + +AKEL I++ +D
Sbjct: 446 KMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFG 505
Query: 336 ALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
++I ++ + A F+ + G P + L C K ++ + V+ + +
Sbjct: 506 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 565
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ Y +V+ C GR+ E + +EM +KG+ P YN +++ PA
Sbjct: 566 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 625
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K + +M SG + N TY+I++ + + A+ LF + V D T +++ G
Sbjct: 626 KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 685
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
+ Q ++ A ++F S++ ++ ++ + MI+
Sbjct: 686 MFQTRRVEEAKDLF-ASISRSGLVPCAVTYSIMIT 719
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 168/391 (42%), Gaps = 12/391 (3%)
Query: 136 QKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
KA +FNE++ + + P + +++A L G +D+A++ F++M +GV +
Sbjct: 413 DKAMIIFNEMRDH--GVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
I FC + L + ++ E+ N M V II+ CK RV +A + D
Sbjct: 471 CLIQGFCTHGSLLKAKELISEIMN--NGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTV 528
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
PD + Y ++ + + L+G + + V G+ P Y + G RI
Sbjct: 529 NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRID 588
Query: 314 EAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
E L ++ + N +I G + A V F+ M E G T S +
Sbjct: 589 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 648
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
+ L K DE + ++K L A + D+ + N M++ + + R+ EA + + R GL
Sbjct: 649 RGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV 708
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P Y+ ++ +E L+ A+ ++ M +GC + + N ++ + + EI A
Sbjct: 709 PCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAY 768
Query: 493 FHNMLEKGVAPDATTYTSLLE-----GLCQE 518
+ E+ + + T L++ G C+E
Sbjct: 769 LSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 799
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 3/210 (1%)
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN-DYFTDMESYN 404
P A+ FF ++ G S+L K C+ ++DE +++ + D+ SYN
Sbjct: 129 PELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYN 188
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKG--LDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+++ LC G+ +A +++ M G PDV YN++++ +E + A L+ +M
Sbjct: 189 ILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMV 248
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G +L TY+ ++ + ++ A M+ KGV PD TY +L+ G +
Sbjct: 249 QRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWK 308
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A VF + ++ L+T M SLC+
Sbjct: 309 EAVRVFKEMRRQSILPDVVALNTLMGSLCK 338
>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 726
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 134/553 (24%), Positives = 233/553 (42%), Gaps = 15/553 (2%)
Query: 8 DLATRISQAIISASNRTRPARK-WTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSL 66
DLA ++ + R R+ W+P LE L L LR LSP V V+
Sbjct: 52 DLAEESRSRLVRDTCRLLELRESWSPKLEAQLRHL-LR-VLSPPQVRAVLRAQARGDVRR 109
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A FF WA +Q + H+P + +L LS +R + V++ + + + + ++
Sbjct: 110 AFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLM 169
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVE 186
S + + A V + ++ + ICN + VL G +D AL+ + M GVE
Sbjct: 170 LSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVE 229
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
+ I C ++ + M+ + +N + ++ CK KRVEE
Sbjct: 230 PDVYTYNCLIKGLCGARRVVDAMEMIGVML--QNGCPPDKISYYTVMSFLCKEKRVEEVR 287
Query: 247 KVLDELRIRECK-PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
+L +R PD + Y ++ G E L++ Y +
Sbjct: 288 GLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHS 347
Query: 306 LIVERRICEAKEL-GEVIVSGKFTIDDDVL--NALIGSVSSI-DPRSAIVFFNFMIEKGR 361
+ R+ EAKE+ GE+I G DV+ + ++ I + A M +
Sbjct: 348 FCLNGRMAEAKEIVGEMISKG---CQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDC 404
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME-SYNVMVSFLCTSGRLREAY 420
P T + L LCK K+ E E+ S +++T + +Y+V++ G+L+E+
Sbjct: 405 KPNTVTHTALLNGLCKVGKTSEAWELLNK-SEEEWWTPSDITYSVVMHGFRREGKLKESC 463
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
V+ +M +KG P N L+ A C++ AK +Q + GC+ N+ + +I F
Sbjct: 464 DVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGF 523
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
S G++E AL L +M PD TYT +++ L ++ L+ A + K +N V+
Sbjct: 524 SRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTP 583
Query: 541 SILSTFMISLCRR 553
T + C +
Sbjct: 584 VTYRTVIHRYCEK 596
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 102/469 (21%), Positives = 197/469 (42%), Gaps = 55/469 (11%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITL--DSSVYRFIIPSLIQGKNTQKAFSVF 142
+SY++++ L +++ + +L++++ N L D Y +I L + + +A
Sbjct: 268 ISYYTVMSFLCKEKRVEEVRGLLQRMR-NDAGLFPDQVTYNVLIHGLAKHGHADEALEFL 326
Query: 143 NEV---KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
E +F +++G ++++ +G + A ++ EM +G + + + + F
Sbjct: 327 RESEGKRFRVDEVG---YSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGF 383
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
C +L Q M+ + K N +V +++G CK + EA+++L++ P
Sbjct: 384 CRIGELDQARKMMKHMYK--NDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTP 441
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
I Y +V F+ G + E V+ + + G P T + I L +R+ EAK+
Sbjct: 442 SDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFM 501
Query: 320 EVIVSGKFTIDDDVLNALIGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
E S TI+ +I S D SA+ + M R P + T + + L K+
Sbjct: 502 EQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKK 561
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
GRL+EA G++++M +G+ P Y
Sbjct: 562 -----------------------------------GRLKEATGLVEKMLNRGVLPTPVTY 586
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT-YNILISKFSEVGEIEGALRLFHNML 497
+++ C + L L ++M A +K+ YN ++ K G++ A L + +L
Sbjct: 587 RTVIHRYCEKGNLEDLLNLLEKMLARQ---EMKSAYNQVVEKLCAFGKLNEAYSLLYKIL 643
Query: 498 EKGVAPDATTYTSLLEG-LCQETNLQA---AFEVFNKSVNHDVMLARSI 542
DA T L+E L + LQA A +F +++ DV L + +
Sbjct: 644 RTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIPDVKLCQKV 692
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 203/454 (44%), Gaps = 13/454 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
S++S+L + S Q + + ++ + Y +I + + +K + +
Sbjct: 116 SFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWM 175
Query: 146 KFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
N + P+I + +L+ LA G + +A+++FDEMS RGV + + + I F
Sbjct: 176 FEN--GLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKG 233
Query: 204 KLGQVLSMLDEVRKR---ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ +E+ KR E+S+ ++I+G CK +++E+ ++ + ++ E PD
Sbjct: 234 DFVKA----NEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPD 289
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ + G+ E V ++ + G++P Y + GL ++ + EL
Sbjct: 290 LFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWN 349
Query: 321 VIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
V+ S + N LI G + + AI ++ + E+G +T L LCK
Sbjct: 350 VM-SKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNG 408
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
++ + + + D +Y+ MV LC G L +A +I +MK+ + +N
Sbjct: 409 YLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFN 468
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
SL+ R L A + +M + C+ + +YN +I+ + A MLE+
Sbjct: 469 SLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEE 528
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
G+ PD TY+ L++GLC+ + A ++++ +N
Sbjct: 529 GLKPDMITYSLLIDGLCRGEKVDMALNLWHQCIN 562
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/453 (21%), Positives = 199/453 (43%), Gaps = 44/453 (9%)
Query: 73 WASQQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLI 130
W + N SP ++ S++ LS + NA + V +++ + ++ D Y ++ L
Sbjct: 278 WNRMKKN-EKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLF 336
Query: 131 QGKNTQKAFSVFNEV-KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
+ K F ++N + K NC +I N L+ L + ++ A+ + + RG++ +
Sbjct: 337 RTGKLNKCFELWNVMSKNNCCNIVSY--NMLIQGLLDNKKVEQAICYWQLLHERGLKADS 394
Query: 190 IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-IIHGFCKGKRVEEAFKV 248
+G+ I C+N L + L +L+E EN + A ++HG CK +E+A ++
Sbjct: 395 TTYGLLINGLCKNGYLNKALRILEEA---ENEGADLDTFAYSSMVHGLCKKGMLEQAVEL 451
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
+ +++ K + + + + + E VL++ + AP Y I GL
Sbjct: 452 IHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGL-- 509
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTL 368
C+A+ + +S K M+E+G P + T
Sbjct: 510 ----CKAERFSDAYLSLKE----------------------------MLEEGLKPDMITY 537
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
S L LC+ K D + ++ D++ +N+++ LCT+ ++ A + +M++
Sbjct: 538 SLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQ 597
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
PD+ +N++ME + A K+WD++ +G ++ +YNI +
Sbjct: 598 VNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSD 657
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
A+ ++ L++G+ P+A T+ L+ + + L
Sbjct: 658 AIEFLYDALDRGILPNAPTWNVLVRAVVDDKPL 690
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 118/552 (21%), Positives = 233/552 (42%), Gaps = 59/552 (10%)
Query: 47 LSPSLVARVI----NPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINA 102
+SP+LV +++ NP + AL F+ A Q P + H P +H IL+ L + +
Sbjct: 8 ISPTLVLKLLKAEKNP------NAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVH 61
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK--FNCEDIGPEICNSL 160
+ ++ ++ + T V I + + +A ++F + F C + G NS+
Sbjct: 62 VGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGC-NPGIRSFNSM 120
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
L A F G+ + + + I C+ + + +L + EN
Sbjct: 121 LNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMF--EN 178
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
+ + +I+ K + +A ++ DE+ +R PD + Y I+ + F G +
Sbjct: 179 GLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKA 238
Query: 281 EVVLKKK-RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+ K+ + V P Y I GL ++ E+ E+ + + + D +++I
Sbjct: 239 NEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIH 298
Query: 340 SVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND--- 395
+S + +A F MIE G P + T + + L + K ++ E++ V+S N+
Sbjct: 299 GLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCN 358
Query: 396 ----------------------YF---------TDMESYNVMVSFLCTSGRLREAYGVIQ 424
Y+ D +Y ++++ LC +G L +A +++
Sbjct: 359 IVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILE 418
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
E + +G D D Y+S++ C++ +L A +L QM + N +N LI+ +
Sbjct: 419 EAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAF 478
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF----EVFNKSVNHDVMLAR 540
++E A+ + M K AP +Y +++ GLC+ A+ E+ + + D M+
Sbjct: 479 KLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPD-MITY 537
Query: 541 SILSTFMISLCR 552
S+L + LCR
Sbjct: 538 SLL---IDGLCR 546
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 189/449 (42%), Gaps = 17/449 (3%)
Query: 103 IDSVLKQ---VKVNKI----TLDSSVY------RFIIPSLIQGKNTQKAFSVFNEVKFNC 149
ID L++ VK N+I +SSVY +I L + ++ ++N +K N
Sbjct: 226 IDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNE 285
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ +S++ L+ G + A K+F EM G+ + + KL +
Sbjct: 286 KSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCF 345
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+ + + K I V ++I G K+VE+A L R K D Y ++
Sbjct: 346 ELWNVMSKNNCCNI---VSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLIN 402
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
G + + +L++ G T Y + GL + + +A EL + + +
Sbjct: 403 GLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKL 462
Query: 330 DDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
+ V N+LI G V + AI M K PT+ + + + LCK + +
Sbjct: 463 NSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSL 522
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
K + DM +Y++++ LC ++ A + + K L PD+ +N ++ C
Sbjct: 523 KEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTA 582
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
+ A +++ QM C +L T+N ++ + G+ AL+++ +LE G+ PD +Y
Sbjct: 583 QKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISY 642
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+GLC + A E +++ ++
Sbjct: 643 NITFKGLCSCARVSDAIEFLYDALDRGIL 671
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 175/403 (43%), Gaps = 23/403 (5%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL+ LA + ++++M G+ + + C ++G+ L+++ + +R
Sbjct: 102 LLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRR- 160
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
I V +I G C R+ +A + ++ C P+ I Y + + G++
Sbjct: 161 -GYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNI-- 217
Query: 280 REVVLKKKRKL---------GVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTI 329
+ LK +++ P Y I L +RR EA++L E+ V G
Sbjct: 218 -SIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQG---- 272
Query: 330 DDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
+ + S +S+ A FN M+ +G P + T + L LCK K E ++ +
Sbjct: 273 ----MTPTVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLE 328
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
V+ ++ +YN ++ C G L A + M KG +PDV Y L+ C+
Sbjct: 329 VMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTS 388
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
+ A KL++ M G ++KTY L++ + G++ A +LF M G+ D Y
Sbjct: 389 KVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYG 448
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L GLC+ L A E+FNK ++++ L + + LC+
Sbjct: 449 IFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCK 491
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 181/418 (43%), Gaps = 34/418 (8%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L+ L + I A +F M G + I +G + C + L + E+
Sbjct: 171 TLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEML-N 229
Query: 219 ENSM--INGSVIAV---LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY-RIVAEEFK 272
++S+ IN + + +II CK +R +EA + +E++++ P I+Y ++ EE K
Sbjct: 230 DSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAK 289
Query: 273 LM--------------------------GSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
+ G V E + +L+ + G+ P Y I G
Sbjct: 290 RLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGF 349
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTL 365
+ + A+EL + S D LI G + A+ +N M++ G+ P +
Sbjct: 350 CLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDV 409
Query: 366 STLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQE 425
T L L + K + +++ V+ D+ Y + ++ LC +G L EA + +
Sbjct: 410 KTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNK 469
Query: 426 MKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
+K + D+ +N L++ C+ L A +L++++ ++ TYNI+I +F G+
Sbjct: 470 LKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQ 529
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
+ A LF M + G PD TY +L+ G + L+ E+ + V DV L +IL
Sbjct: 530 VVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVNIL 587
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
N G++++I A FF+ M+ P LS+ ++L L K ++ +Y + +
Sbjct: 69 NCKTGNITAIQ---AFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLS 125
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D + N++++ LC R+ E V+ + R+G PD+ Y +L++ C E + A
Sbjct: 126 GISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKA 185
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK------GVAPDATTY 508
L+ +M GC+ N TY L+ G I AL+L ML P +Y
Sbjct: 186 ALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISY 245
Query: 509 TSLLEGLCQETNLQAAFEVF 528
+ +++ LC++ A ++F
Sbjct: 246 SIIIDALCKDRREDEARDLF 265
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 168/352 (47%), Gaps = 5/352 (1%)
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ G V ++++E+R+ +I V V+++ F + V +A +VLDE+ C+PD
Sbjct: 145 QFGAVWALIEEMRQENPHLITPQVF-VILMRRFASARMVHKAVQVLDEMPNYGCEPDEYV 203
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+ + + + GSV E + ++ R P + + G E ++ EAK + +
Sbjct: 204 FGCLLDALRKNGSVKEAASLFEELR-YRWKPSVKHFTSLLYGWCKEGKLMEAKHVLVQMK 262
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
D V N L+G + D A M KG P ++ + L ++LCK + +
Sbjct: 263 DAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRKGCEPNATSYTVLIQSLCKHERLE 322
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E V+ + N D+ +Y+ ++S C G+++ Y ++ EM ++G P+ Y +M
Sbjct: 323 EATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIM 382
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
A +++ L K+L ++M GC+ +L YN +I ++GE++ +RL++ M G++
Sbjct: 383 VAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGVRLWNEMESSGLS 442
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA--RSILSTFMISLCR 552
P T+ ++ G ++ L A E F + V + A L M SL R
Sbjct: 443 PSIDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFAAPQYGTLKELMNSLLR 494
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/500 (22%), Positives = 204/500 (40%), Gaps = 76/500 (15%)
Query: 32 PLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSIL 91
P LE L + G+ + P L RV+N +LA F++WAS+Q +Y +++
Sbjct: 81 PKLELALRESGV--VVRPGLTERVLN-RCGDAGNLAYRFYSWASKQSGHRLDHDAYKAMI 137
Query: 92 KSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCED 151
K LS RQ A+ +++++++ P LI
Sbjct: 138 KVLSRMRQFGAVWALIEEMRQEN------------PHLIT-------------------- 165
Query: 152 IGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM 211
P++ L+ AS + A+++ DEM + G E FG + +N + + S+
Sbjct: 166 --PQVFVILMRRFASARMVHKAVQVLDEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASL 223
Query: 212 LDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
+E+R R + +++G+CK ++ EA VL +++ +PD + Y + +
Sbjct: 224 FEELRYRWKPSVKHFTS---LLYGWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGY 280
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
+ + +LK+ R+ G P Y I L R+ EA +
Sbjct: 281 AQADKMGDAYDLLKEMRRKGCEPNATSYTVLIQSLCKHERLEEATRV------------- 327
Query: 332 DVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
F M G L T S L CK K E+ +
Sbjct: 328 ---------------------FVEMQRNGCQADLVTYSTLISGFCKWGKIKRGYELLDEM 366
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+F + Y ++ L E ++ EM++ G PD+S YN+++ C+ +
Sbjct: 367 IQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEV 426
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV--APDATTYT 509
+ +LW++M +SG S ++ T+ I+I+ F E G + A F M+ +G+ AP T
Sbjct: 427 KEGVRLWNEMESSGLSPSIDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFAAPQYGTLK 486
Query: 510 SLLEGLCQETNLQAAFEVFN 529
L+ L + L+ A + +N
Sbjct: 487 ELMNSLLRAEKLEMAKDAWN 506
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 176/394 (44%), Gaps = 14/394 (3%)
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
+L + G+++ A+ +FD+M G+ I F I C G+VL V K
Sbjct: 197 ALFGYMVETGFLE-AVALFDQMVEIGLTPVVITFNTLINGLCLE---GRVLEAAALVNKM 252
Query: 219 ENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ V+ I++G CK + A +L ++ KPD + Y + + G
Sbjct: 253 VGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHH 312
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ + + + + G+AP Y I G R +A+ L ++ + D NAL
Sbjct: 313 SDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNAL 372
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I SV A + M+ + P T +++ CK N+ D+ ++ ++++ D
Sbjct: 373 ISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDV 432
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
T +N ++ C + R+ E +++E+ R+GL + + YN+L+ C D L A+
Sbjct: 433 VT----FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L+ +M + G + T NIL+ F E ++E AL LF + + D Y ++ G+C
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 517 QETNLQAAFEVFN----KSVNHDVMLARSILSTF 546
+ + + A+++F V DV ++S F
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 214/485 (44%), Gaps = 18/485 (3%)
Query: 38 LHQLGLRDSLSPSLVARVINPYLLTHHSL-ALGFFNWASQQPNFTHSPLSYHSILKSLSL 96
LH L L D +S +L + Y++ L A+ F+ + T +++++++ L L
Sbjct: 183 LHGLCLEDRISEALA---LFGYMVETGFLEAVALFDQMVE-IGLTPVVITFNTLINGLCL 238
Query: 97 SRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE- 155
++ +++ ++ + +D Y I+ + + +T+ A ++ ++++ I P+
Sbjct: 239 EGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET--HIKPDV 296
Query: 156 -ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
I ++++ L DG+ +A +F EM +G+ + + I FC + +L +
Sbjct: 297 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 356
Query: 215 VRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
+ +RE IN V+ +I K ++ EA K+ DE+ R PD + Y + F
Sbjct: 357 MIERE---INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF-- 411
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
R K L +P + I +R+ E +L I +
Sbjct: 412 --CKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 334 LNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
N LI +D +A F MI G P T + L C+ K +E +E+++V+
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ D +YN+++ +C ++ EA+ + + G++PDV YN ++ C + +
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A L+ +M +G + TYN LI + GEI+ ++ L M G + DA T
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAE 649
Query: 513 EGLCQ 517
E +C+
Sbjct: 650 EIICR 654
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 137/322 (42%), Gaps = 19/322 (5%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I F + R + A + ++ IR + ++ I+ + F + K KLG
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
P + + GL +E RI EA AL G + A+
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEAL-------------------ALFGYMVETGFLEAVA 212
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F+ M+E G P + T + L LC + E + + D+ +Y +V+ +C
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
G + A ++ +M+ + PDV Y+++++ C++ A+ L+ +M G + N+
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
TYN +I F G A RL +M+E+ + PD T+ +L+ +E L A ++ ++
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 532 VNHDVMLARSILSTFMISLCRR 553
++ + ++ + C+
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKH 414
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 122/289 (42%), Gaps = 24/289 (8%)
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
+R++ K + GV R N R I G + E+ L +V T + + L
Sbjct: 29 KRDIEKKNTKSGGV--RLNS-RRLIHGRVAEKGTKSLPSLTQV------TFEGEELKLKS 79
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
GS AI FF++M+ T + + + N+ D + +Y+ +
Sbjct: 80 GSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPL 139
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR------ 452
++ S+N+++ C +L + ++ + G PDV +N+L+ C ED +
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 453 ---------PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
A L+DQM G + + T+N LI+ G + A L + M+ KG+
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
D TY +++ G+C+ + ++A + +K + I S + LC+
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCK 308
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 191/464 (41%), Gaps = 82/464 (17%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINA---IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
+ S L+Y+++L +LS + +A DS+L + + + Y +I +L +
Sbjct: 111 GYVPSVLAYNAVLLALSDASLTSARRFFDSMLS----DGVAPNVYTYNILIRALCGRGHR 166
Query: 136 QKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
++A S+ +++ GP + N+L+A G +D A ++ M G++ + + F
Sbjct: 167 KEALSILRDMRG--AGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTF- 223
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
NSM+NG CK ++E+A KV DE+
Sbjct: 224 --------------------------NSMVNG----------MCKAGKMEDARKVFDEMM 247
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
PD ++Y + + G E V + + G+ P + I +C
Sbjct: 248 REGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLI------HVMC 301
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+A L A+ M E+G T + L
Sbjct: 302 KAGNL----------------------------EWAVTLVRQMRERGLQMNEVTFTALID 333
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
CK+ D+ + + + + YN +++ C GR+ EA ++ EM+ KGL P
Sbjct: 334 GFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKP 393
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
DV Y++++ A C+ A +L QM G + TY+ LI E + A LF
Sbjct: 394 DVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLF 453
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
NM++ G+ PD TYTSL++G C+E N++ A + +K V V+
Sbjct: 454 KNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVL 497
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 111/513 (21%), Positives = 210/513 (40%), Gaps = 82/513 (15%)
Query: 57 NPYLLTHHSLALGFFNWA---------------SQQPNFTHSPLSYHSILKSLSLSRQIN 101
P ++T+++L FF +PN ++++S++ + + ++
Sbjct: 182 GPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNL----VTFNSMVNGMCKAGKME 237
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--S 159
V ++ + D Y ++ + + +A SVF E+ + I P++ S
Sbjct: 238 DARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQ--KGIMPDVVTFTS 295
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ V+ G ++ A+ + +M RG++ + + F I FC+ L L VR
Sbjct: 296 LIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL---AVRGMR 352
Query: 220 NSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL---MG 275
I SV+ +I+G+C R++EA ++L E+ + KPD + Y + +
Sbjct: 353 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 412
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
S FE + +K GV P Y I R +CE K L +
Sbjct: 413 SAFELNQQMLEK---GVLPDAITYSSLI------RVLCEEKRLSD--------------- 448
Query: 336 ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
A V F MI+ G P T ++L CK + + ++ +
Sbjct: 449 -------------AHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAG 495
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC---------- 445
D+ +Y+V+++ L S R EA ++ ++ + P + Y++LM C
Sbjct: 496 VLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLA 555
Query: 446 -----CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
C + L+ A K++ M + + Y++LI G + AL ML++G
Sbjct: 556 LLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRG 615
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
AP++T+ SL+ GL + + A +V + +N
Sbjct: 616 FAPNSTSTISLIRGLFENGMVVEADQVIQQLLN 648
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 171/410 (41%), Gaps = 51/410 (12%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NS++ + G +++A K+FDEM G+ + + + +C+ + LS+ E+ +
Sbjct: 224 NSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQ 283
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ ++ V +IH CK +E A ++ ++R R + + + + + + F G +
Sbjct: 284 K--GIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFL 341
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ + ++ R+ + P Y I G + R+ EA+EL
Sbjct: 342 DDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEAREL------------------- 382
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
+ M KG P + T S + CK + E+ + +
Sbjct: 383 ---------------LHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVL 427
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D +Y+ ++ LC RL +A+ + + M + GL PD Y SL++ C+E + A L
Sbjct: 428 PDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSL 487
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL------ 511
D+M +G ++ TY++LI+ S+ A +L + + P T Y +L
Sbjct: 488 HDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRK 547
Query: 512 ---------LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L+G C + + A +V+ ++ + L S+ S + CR
Sbjct: 548 AELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCR 597
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 109/219 (49%)
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
NA++ ++S SA FF+ M+ G P + T + L + LC R E + + + +
Sbjct: 120 NAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGA 179
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ +YN +V+ +G + A ++ M GL P++ +NS++ C+ + A
Sbjct: 180 GCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDA 239
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+K++D+M G + + +YN L+ + + G AL +F M +KG+ PD T+TSL+
Sbjct: 240 RKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHV 299
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+C+ NL+ A + + + + + + C++
Sbjct: 300 MCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKK 338
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 181/433 (41%), Gaps = 11/433 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+++S++ ++Q+ + ++ + D+ Y +I + +A +F E
Sbjct: 165 FTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFRE 224
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ P++ +L+ L G + L M +M G +T + + +C
Sbjct: 225 MT------QPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCRE 278
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
K + +L+E+ ++ ++ V ++++ +C+ R+ A +V + +R + C+P+
Sbjct: 279 QKAEEAEKILNEMF--DSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVW 336
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + F G V++ +L + R+ GV P Y I G ++ I A L ++
Sbjct: 337 TYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLM 396
Query: 323 VSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
D N LI ++ A F+ + +G P T + + LCK K
Sbjct: 397 EGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKF 456
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
D + + + Y D +Y+ + LC + +E I EM +K + P Y +
Sbjct: 457 DVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIV 516
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ E A ++W QM + GCS ++ TY + + G ++ A + M +
Sbjct: 517 INRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRT 576
Query: 502 APDATTYTSLLEG 514
DA Y +L++G
Sbjct: 577 IVDAMAYNTLIDG 589
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 165/395 (41%), Gaps = 40/395 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L + +A + M G F I +C +L + ++
Sbjct: 133 NALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPF 192
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R S +V +I GFC+ R++EA ++ E+ +PD + + + G
Sbjct: 193 RGFS--QDAVSYAALIEGFCEAGRIDEALELFREMT----QPDMYTHAALVKGLCDAGRG 246
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E +L+K ++LG P T Y + E++ EA+++
Sbjct: 247 EEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKI------------------- 287
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
N M + G +P + T + + C+ + V V++ +
Sbjct: 288 ---------------LNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCE 332
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
++ +YN +V C +G++ +A ++ +M+ G++PDV YN L+ C + + A +L
Sbjct: 333 PNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRL 392
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
M +G + + TYN+LI + G+++ A LF + +G+ P++ T+ +++ GLC+
Sbjct: 393 LRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCK 452
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A ++ S F+ +LC+
Sbjct: 453 AGKFDVACTFLENMISAGYAPDTYTYSPFIENLCK 487
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 153/378 (40%), Gaps = 7/378 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NSL+ ++ A +F +M RG + + I FCE ++ + L + E+ +
Sbjct: 168 NSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ 227
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ ++ G C R EE +L +++ +P AY + + +
Sbjct: 228 PD------MYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKA 281
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E E +L + G+ P + E R+ A + E + + NA+
Sbjct: 282 EEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAI 341
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ G ++ A+ + M E G P + T + L + C + +++ N
Sbjct: 342 VQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGL 401
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D +YNV++ LC +G++ EA + ++ +G+ P+ +N+++ C+ A
Sbjct: 402 AADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACT 461
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ M ++G + + TY+ I + + L ML+K V P YT ++ L
Sbjct: 462 FLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLF 521
Query: 517 QETNLQAAFEVFNKSVNH 534
E N A ++ + V+
Sbjct: 522 NERNYGLATRIWGQMVSQ 539
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN ++ LC LR A + M R G PD +NSL+ CR L A L+ +M
Sbjct: 131 TYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKM 190
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
G S + +Y LI F E G I+ AL LF M + PD T+ +L++GLC
Sbjct: 191 PFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLC 241
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P + YN+L+ A CR LR A++ M SG + T+N LI + ++E A L
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
F M +G + DA +Y +L+EG C+ + A E+F + D+
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDM 230
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 86/439 (19%), Positives = 165/439 (37%), Gaps = 40/439 (9%)
Query: 138 AFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
A VF ++F + N+++ + G + A+ + D+M GVE + + + I
Sbjct: 319 AVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIR 378
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
C + +G +L + N + ++I CK +V+EA + D L R
Sbjct: 379 GQCIDGHIGSAFRLLRLMEG--NGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGI 436
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
+P+ + + V G L+ G AP T Y FI +C+ K
Sbjct: 437 RPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFI------ENLCKTKG 490
Query: 318 LGEVIVSGKFTIDD----DVLNALIGSVSSID----PRS---AIVFFNFMIEKGRVPTLS 366
E G F ID+ DV + + I+ R+ A + M+ +G P +
Sbjct: 491 SQE----GLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVV 546
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T + + C + DE V + D +YN ++ + G+ A +++ M
Sbjct: 547 TYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHM 606
Query: 427 KRKGLDPD-VSFY---NSLMEACCREDLLRPAKKLW------------DQMFASGCSGNL 470
P+ +F+ L++ E + A +W + M + +
Sbjct: 607 TGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSA 666
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+TY ++ FSE ++ L M E+ + + Y +L+ C+ A+ +
Sbjct: 667 RTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCS 726
Query: 531 SVNHDVMLARSILSTFMIS 549
+ H L I +++S
Sbjct: 727 MIGHG-FLPNLIFYQYLLS 744
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/486 (17%), Positives = 171/486 (35%), Gaps = 62/486 (12%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y++I++ + ++ ++L Q++ + D Y +I + AF + +
Sbjct: 337 TYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLM 396
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ N N L+ L G +D A +FD + +RG+ +++ F I C+ K
Sbjct: 397 EGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKF 456
Query: 206 GQVLSMLDEVRKRENSMING----SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ L EN + G + I CK K +E +DE+ ++ KP
Sbjct: 457 DVACTFL------ENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPST 510
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ Y IV + + + G +P Y + E R+ EA+ +
Sbjct: 511 VNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTE 570
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRSAIV--------------FFNFMI---------- 357
+ + +D N LI +SI V F F I
Sbjct: 571 MKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRL 630
Query: 358 ---------------------------EKGRVPTLS-TLSNLSKNLCKRNKSDELVEVYK 389
+K VP+ + T ++ + + + DE+ +
Sbjct: 631 AEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVS 690
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
++ + + + YN +V+ C +A+ ++ M G P++ FY L+ E
Sbjct: 691 LMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEG 750
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
AK+++ + + + ++I F G + + + + P TY
Sbjct: 751 QADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYA 810
Query: 510 SLLEGL 515
L E L
Sbjct: 811 MLTEEL 816
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 83/191 (43%), Gaps = 4/191 (2%)
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
PT +T + L + LC+R ++ + + D ++N ++ C + +L A+
Sbjct: 126 APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHD 185
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+ +M +G D Y +L+E C + A +L+ +M ++ T+ L+
Sbjct: 186 LFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREM----TQPDMYTHAALVKGLC 241
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
+ G E L + M E G P Y +L++ C+E + A ++ N+ + +M
Sbjct: 242 DAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVV 301
Query: 542 ILSTFMISLCR 552
+ + + CR
Sbjct: 302 TCTIVVNAYCR 312
>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Cucumis sativus]
Length = 683
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/465 (22%), Positives = 207/465 (44%), Gaps = 20/465 (4%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
Q N + ++Y +++ S IN +S L +++ + Y +I ++
Sbjct: 108 QLNLVPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLH 167
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLAS--DGYIDNALKMFDEMSHRGVEFSTIGFGV 194
AF V ++ ++ P IC + + S G+ D AL ++ +M G++ +
Sbjct: 168 DAFKVLRKMVH--KNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDA 225
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI-----IHGFCKGKRVEEAFKVL 249
F+ + ++ +E + M +G + L+ + GF K +V A +
Sbjct: 226 FVNNMKRSGRM-------EEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLA 278
Query: 250 DELRIRECKPDFIAYRIVAE-EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
E+ + D + + ++ FKL S + E + R++G++P Y + G
Sbjct: 279 QEMTSKNVVFDIVTFNVLINCLFKLGKS--DTESIYSAMREMGLSPDLATYNTMLNGNFK 336
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
+ A EL + S K + N +I G + +AI M+ G PT +T
Sbjct: 337 KGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTT 396
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
L K ++D +++ +++L D + YN+++S LC G R+A V+++M+
Sbjct: 397 YRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDME 456
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
+G+ D + YN+L+ C L+ A + M + S +++TYN+L+ S+ G I
Sbjct: 457 ERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIH 516
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
A L + ++G+ P+A TY +L+ G C+ N + ++ + V
Sbjct: 517 EADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMV 561
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 174/377 (46%), Gaps = 26/377 (6%)
Query: 154 PEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ---- 207
P++ N +L+ G + +AL + EM+ + V F + F V I KLG+
Sbjct: 253 PDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCL---FKLGKSDTE 309
Query: 208 -VLSMLDEVR-----KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ S + E+ N+M+NG+ F KG A ++ +E++ R+ P+
Sbjct: 310 SIYSAMREMGLSPDLATYNTMLNGN---------FKKGNWTS-ALELWNEMKSRKLIPNA 359
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
I I+ G + +LK+ +G+ P + YR + RR + E+
Sbjct: 360 ITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHEL 419
Query: 322 IVSGKFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+V+ + +D DV N LI ++ + R A M E+G + +T + L C +
Sbjct: 420 LVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSH 479
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
Y + + D+E+YN+++ L +G + EA ++ E+K++GL P+ Y +
Sbjct: 480 LKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYET 539
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
LM C+ + +++ +M G + YN+LI FS++G+++ A L + M KG
Sbjct: 540 LMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKG 599
Query: 501 VAPDATTYTSLLEGLCQ 517
V+P TTY L+ G C
Sbjct: 600 VSPTCTTYDILICGWCN 616
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/538 (18%), Positives = 198/538 (36%), Gaps = 72/538 (13%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+++ SIL L +++ +L+++ + L++ Y ++ +L + +A
Sbjct: 11 VTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMTLAC 70
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + C L+ L G I A +F + + + I + I C+
Sbjct: 71 MIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCKLGD 130
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ S L E+ +++ + + +I+G+ K + +AFKVL ++ + P+ Y
Sbjct: 131 INGAESALHEMEEKD--CVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTY 188
Query: 265 RIVAE-----------------------------------EFKLMGSVFEREVVLKKKRK 289
I+ + K G + E E ++ K
Sbjct: 189 AILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMAS 248
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSA 349
G+ P +Y + G + ++ A L + + S D N LI + +
Sbjct: 249 GGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDT 308
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
++ M E G P L+T + + K+ +E++ + + + + N+M++
Sbjct: 309 ESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMING 368
Query: 410 LCTSGRLREAYGVIQEMKRKGLDP-----------------------------------D 434
LC +GR+ A +++EM GL P D
Sbjct: 369 LCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVD 428
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
YN L+ C+ + R A + M G + TYN LI + ++ A +
Sbjct: 429 KDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYS 488
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
ML + V+PD TY LL GL + + A ++ ++ ++ T M C+
Sbjct: 489 TMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCK 546
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M+ G P + T ++ LCK K E + + + + SY +++ L +G+
Sbjct: 1 MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ EA + M +G + DV L++ + ++ A+ L+ ++ N TY+
Sbjct: 61 VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI ++G+I GA H M EK P+ TY+SL+ G ++ L AF+V K V+ +
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180
Query: 536 VM 537
M
Sbjct: 181 AM 182
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/159 (19%), Positives = 72/159 (45%), Gaps = 2/159 (1%)
Query: 55 VINPYLLTHHSLALGFFNWASQQPNFTHSPL-SYHSILKSLSLSRQINAIDSVLKQVKVN 113
+I+ Y ++ H L F +++ + +Y+ +L LS + I+ D +L ++K
Sbjct: 470 LIHGYCISSH-LKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKR 528
Query: 114 KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNA 173
+ ++ Y ++ + +NT++ ++ E+ P N L+ + G + A
Sbjct: 529 GLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQA 588
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML 212
++ +EM +GV + + + I +C K+ + S L
Sbjct: 589 KELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTL 627
>gi|356509602|ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 598
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 203/468 (43%), Gaps = 43/468 (9%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSV 106
L+PSLV V+N L +L F + + + +HS L+Y +L+SL S + V
Sbjct: 36 LTPSLVYEVVNR--LHIPNLGFKFVEFCRHKLHMSHSYLTYSLLLRSLCRSNLHHTAKVV 93
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLAS 166
++ + D+ + F++ S + + +V+ N + + N L VL
Sbjct: 94 YDWMRCDGQIPDNRLLGFLVWSYAIVGRLDVSRELLADVQCNNVGVNAVVYNDLFNVLIR 153
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
+ +A+ +F E+ +R R + +
Sbjct: 154 QNKVVDAVVLFREL----------------------------------IRLRYKPV---T 176
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
+++ G C+ ++EAF++L++LR C PD I Y + + V +LK+
Sbjct: 177 YTVNILMRGLCRAGEIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKE 236
Query: 287 KRKLG-VAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSI 344
G AP Y I G ++ E L GE+I SG + NALIG +
Sbjct: 237 VCLNGEFAPDVVSYTTIISGYCKFSKMEEGNLLFGEMIRSGT-APNTFTFNALIGGFGKL 295
Query: 345 -DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
D SA+ + M+ +G VP ++T ++L + + + ++++ ++ + + ++
Sbjct: 296 GDMASALALYEKMLVQGCVPDVATFTSLINGYFRLGQVHQAMDMWHKMNDKNIGATLYTF 355
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+V+VS LC + RL +A +++ + + P YN +++ C+ + A K+ +M
Sbjct: 356 SVLVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEV 415
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
+ C + T+ ILI G + A+ +FH ML G APD T +L
Sbjct: 416 NRCKPDKLTFTILIIGHCMKGRMPEAIGIFHKMLAVGCAPDEITVNNL 463
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 138/324 (42%), Gaps = 2/324 (0%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
L++ C+ A V D +R PD + + ++G + +L +
Sbjct: 76 LLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVWSYAIVGRLDVSRELLADVQCN 135
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
V Y + LI + ++ +A L ++ ++ +N L+ G + + A
Sbjct: 136 NVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILMRGLCRAGEIDEA 195
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT-DMESYNVMVS 408
N + G +P + T + L LC+ N+ D + K + N F D+ SY ++S
Sbjct: 196 FRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEVCLNGEFAPDVVSYTTIIS 255
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C ++ E + EM R G P+ +N+L+ + + A L+++M GC
Sbjct: 256 GYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALALYEKMLVQGCVP 315
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ T+ LI+ + +G++ A+ ++H M +K + T++ L+ GLC L A ++
Sbjct: 316 DVATFTSLINGYFRLGQVHQAMDMWHKMNDKNIGATLYTFSVLVSGLCNNNRLHKARDIL 375
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
D++ I + + C+
Sbjct: 376 RLLNESDIVPQPFIYNPVIDGYCK 399
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%)
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T S L ++LC+ N VY + + D +V GRL + ++ ++
Sbjct: 73 TYSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVWSYAIVGRLDVSRELLADV 132
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
+ + + YN L R++ + A L+ ++ T NIL+ GEI
Sbjct: 133 QCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILMRGLCRAGEI 192
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ A RL +++ G PD TY +L+ GLC+
Sbjct: 193 DEAFRLLNDLRSFGCLPDVITYNTLIHGLCR 223
>gi|226493958|ref|NP_001147934.1| fertility restorer [Zea mays]
gi|195614680|gb|ACG29170.1| fertility restorer [Zea mays]
Length = 563
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 181/404 (44%), Gaps = 20/404 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI----WKFCE-NAKLGQVLSML 212
N+LL L G A +FD M GV + F + + W+ + + Q+ +M
Sbjct: 99 NTLLNALVEAGRAVEARSVFDGMLAAGVAPNASSFNILVKLYAWRTADFHLAYDQIHAM- 157
Query: 213 DEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
+R + + + L+ G C+ +++EA+ VLD + C+P Y + + +
Sbjct: 158 ----RRHGLLPDVGTFSTLVT-GLCRAGKLDEAWGVLDWMLQEGCRPMVHTYTPIVQGYC 212
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE-LGEVIVSGK--FTI 329
G + E ++ + G P Y I L + R E ++ L E+ G T+
Sbjct: 213 RQGQIEEATNLIGFMEEAGCPPNAVTYNVLIRALCDDARFAEVEQVLAEIETKGHELSTV 272
Query: 330 DDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
++ +G + A+ F + KG PT TLS + LC ++ + + + +
Sbjct: 273 TYNIYMDALGKKGMA--KEALKQFEALQCKGLHPTAFTLSIILNCLCCTSRFSQAISILE 330
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+ ++ + +YN ++S LC GR ++ +M +K + P+ N + + C D
Sbjct: 331 RSTDLNFCAAVVAYNTVMSRLCDMGRWPAVLELLADMIKKCIVPNTRTLNIFIHSLCIAD 390
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE-KGVAPDATTY 508
L AKKL ++ G N TYN LI F GE A +F M E +APD TY
Sbjct: 391 KLSVAKKL---VYNQGFPANAVTYNTLIHSFYLRGEAYEADNMFAYMTEVANIAPDEVTY 447
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
T +++GLC++ A + F +S+ + + L++ +L+ + L R
Sbjct: 448 TIMVDGLCRQGKFDKATDFFKESLRNRLRLSKDLLTALLNGLAR 491
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 2/263 (0%)
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG--SVSSIDPRS 348
GV P Y + L+ R EA+ + + +++ + N L+ + + D
Sbjct: 90 GVPPSVLCYNTLLNALVEAGRAVEARSVFDGMLAAGVAPNASSFNILVKLYAWRTADFHL 149
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A + M G +P + T S L LC+ K DE V + + +Y +V
Sbjct: 150 AYDQIHAMRRHGLLPDVGTFSTLVTGLCRAGKLDEAWGVLDWMLQEGCRPMVHTYTPIVQ 209
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C G++ EA +I M+ G P+ YN L+ A C + +++ ++ G
Sbjct: 210 GYCRQGQIEEATNLIGFMEEAGCPPNAVTYNVLIRALCDDARFAEVEQVLAEIETKGHEL 269
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ TYNI + + G + AL+ F + KG+ P A T + +L LC + A +
Sbjct: 270 STVTYNIYMDALGKKGMAKEALKQFEALQCKGLHPTAFTLSIILNCLCCTSRFSQAISIL 329
Query: 529 NKSVNHDVMLARSILSTFMISLC 551
+S + + A +T M LC
Sbjct: 330 ERSTDLNFCAAVVAYNTVMSRLC 352
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 106/276 (38%), Gaps = 7/276 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L D ++ E+ +G E ST+ + +++ + + L + ++
Sbjct: 240 NVLIRALCDDARFAEVEQVLAEIETKGHELSTVTYNIYMDALGKKGMAKEALKQFEALQC 299
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + + +I++ C R +A +L+ +AY V MG
Sbjct: 300 K--GLHPTAFTLSIILNCLCCTSRFSQAISILERSTDLNFCAAVVAYNTVMSRLCDMGRW 357
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+L K + P T FI L + ++ AK+L + + F + N L
Sbjct: 358 PAVLELLADMIKKCIVPNTRTLNIFIHSLCIADKLSVAKKL---VYNQGFPANAVTYNTL 414
Query: 338 IGSVS-SIDPRSAIVFFNFMIEKGRV-PTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
I S + A F +M E + P T + + LC++ K D+ + +K N
Sbjct: 415 IHSFYLRGEAYEADNMFAYMTEVANIAPDEVTYTIMVDGLCRQGKFDKATDFFKESLRNR 474
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
+ +++ L S R V QE++R+G
Sbjct: 475 LRLSKDLLTALLNGLARSDRNTNILVVFQEIERQGF 510
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET-NL 521
++G ++ YN L++ E G A +F ML GVAP+A+++ L++ T +
Sbjct: 88 SAGVPPSVLCYNTLLNALVEAGRAVEARSVFDGMLAAGVAPNASSFNILVKLYAWRTADF 147
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A++ + H ++ ST + LCR
Sbjct: 148 HLAYDQIHAMRRHGLLPDVGTFSTLVTGLCR 178
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 53/283 (18%), Positives = 102/283 (36%), Gaps = 5/283 (1%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G I+ A + M G + + + V I C++A+ +V +L E+ + + + +V
Sbjct: 215 GQIEEATNLIGFMEEAGCPPNAVTYNVLIRALCDDARFAEVEQVLAEIETKGHEL--STV 272
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+ + K +EA K + L+ + P I+ + +L++
Sbjct: 273 TYNIYMDALGKKGMAKEALKQFEALQCKGLHPTAFTLSIILNCLCCTSRFSQAISILERS 332
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR 347
L Y + L R EL ++ + LN I S+ D
Sbjct: 333 TDLNFCAAVVAYNTVMSRLCDMGRWPAVLELLADMIKKCIVPNTRTLNIFIHSLCIADKL 392
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS-ANDYFTDMESYNVM 406
S V + +G T + L + R ++ E ++ ++ + D +Y +M
Sbjct: 393 S--VAKKLVYNQGFPANAVTYNTLIHSFYLRGEAYEADNMFAYMTEVANIAPDEVTYTIM 450
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
V LC G+ +A +E R L +L+ R D
Sbjct: 451 VDGLCRQGKFDKATDFFKESLRNRLRLSKDLLTALLNGLARSD 493
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 178/431 (41%), Gaps = 9/431 (2%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+++S++ + Q++ + ++ + D Y +I + +A +F E+
Sbjct: 48 TFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEM 107
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + +L+ L G + L M M G ST + + C K
Sbjct: 108 ----DQPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKA 163
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ ML E+ E + V +I+ +CK R+ +A +VL+ +++R CKP+ Y
Sbjct: 164 KEAEEMLQEMF--EKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYN 221
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + F G V + +L K R GV P Y I G ++ I A L ++
Sbjct: 222 ALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGD 281
Query: 326 KFTIDDDVLNALIGSVSSIDPRS--AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
D NALI ++ D R+ A F+ + +G P T ++L LCK K D
Sbjct: 282 GLIADQYTYNALINALCK-DGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDI 340
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ + + + D +Y+ + LC +E I EM +K + P Y ++
Sbjct: 341 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIH 400
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+E + W +M +SGC+ ++ TY + + G + A + M + GV
Sbjct: 401 KLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTV 460
Query: 504 DATTYTSLLEG 514
D Y +L++G
Sbjct: 461 DTMAYNTLMDG 471
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 165/395 (41%), Gaps = 40/395 (10%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++ L + +AL+ M G F I +C ++ + D++
Sbjct: 15 NAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPL 74
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R V +I GFC+ R++EA ++ E+ +PD Y + + G
Sbjct: 75 R--GFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E ++L++ ++LG P T Y + ER+ EA+E+
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEM------------------- 169
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
M EKG P + T + + CK + + + V +++
Sbjct: 170 ---------------LQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCK 214
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
++ +YN +V C G++ +A ++ +M+ G++PD YN L+ C + + A +L
Sbjct: 215 PNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRL 274
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
M G + TYN LI+ + G + A LF ++ +G+ P+A T+ SL+ GLC+
Sbjct: 275 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 334
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ A++ K V+ S+F+ LC+
Sbjct: 335 SGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK 369
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 167/396 (42%), Gaps = 11/396 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NSL+ +D A +FD+M RG + + I FCE ++ + + + E+ +
Sbjct: 50 NSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ 109
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ M ++ G CK R EE +L ++ +P AY V +
Sbjct: 110 PDMHMYAA------LVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKA 163
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E E +L++ + G+AP I E R+ +A + E++ + NAL
Sbjct: 164 KEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNAL 223
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ G + A+ N M G P T + L + C + + +++ +
Sbjct: 224 VQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGL 283
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D +YN +++ LC GR +A + ++ +G+ P+ +NSL+ C+ + A K
Sbjct: 284 IADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWK 343
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
++M ++GC+ + TY+ I ++ + L ML+K V P YT ++ L
Sbjct: 344 FLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLL 403
Query: 517 QETNL----QAAFEVFNKSVNHDVMLARSILSTFMI 548
+E N + E+ + N DV+ + + + I
Sbjct: 404 KERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCI 439
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 108/535 (20%), Positives = 212/535 (39%), Gaps = 45/535 (8%)
Query: 10 ATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVA--RVINPYL----LTH 63
+TR A++ R A++ +L++ + L+P +V VIN Y ++
Sbjct: 146 STRAYAAVVDFRCWERKAKEAEEMLQEMFEK-----GLAPCVVTCTAVINAYCKEGRMSD 200
Query: 64 HSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
L +PN +Y+++++ +++ ++L +++V + D+ Y
Sbjct: 201 ALRVLELMKLRGCKPNV----WTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYN 256
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR 183
+I + + AF + ++ + N+L+ L DG D A +FD + R
Sbjct: 257 LLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETR 316
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G++ + + F I C++ K+ L+++ + + I H CK K +
Sbjct: 317 GIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVS-AGCTPDTYTYSSFIEH-LCKMKGSQ 374
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR-----KLGVAPRTND 298
E + E+ ++ KP + Y IV + + ER L + G P
Sbjct: 375 EGLSFIGEMLQKDVKPSTVNYTIVIHKL-----LKERNYGLVARTWGEMVSSGCNPDVVT 429
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMI 357
Y + +E R+ EA+ + + T+D N L+ +SI A+ M
Sbjct: 430 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 489
Query: 358 EKGRVPTLSTLSNLSKNLCKRN--------------KSDELVEVY---KVLSANDYFTDM 400
VP T L ++L + K+ EL +V+ V+ N++ +
Sbjct: 490 SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNS 549
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+Y+ ++ GR EA ++ MK + + Y +L+ C+ A L
Sbjct: 550 GTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCS 609
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
M G +L +Y L+S G+ + A +F N K +PD + +++GL
Sbjct: 610 MIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGL 664
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN ++ LC L A + M R G PD +NSL+ CR + + A+ L+D+M
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
G + ++ +Y LI F E G I+ A+ LF M + PD Y +L++GLC+
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCK 124
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/493 (18%), Positives = 185/493 (37%), Gaps = 66/493 (13%)
Query: 54 RVINPYLLTHHSLALGFFNWASQQP-----------NFTHSPLSYHSILKSLSLSRQINA 102
R P + T+++L GF N ++Y+ +++ + I +
Sbjct: 211 RGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIES 270
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLA 162
+L+ ++ + + D Y +I +L + T +A S+F+ ++ NSL+
Sbjct: 271 AFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLIN 330
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
L G +D A K ++M G T + FI C+ + LS + E+ +++ +
Sbjct: 331 GLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD--V 388
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+V ++IH K + + E+ C PD + Y + + G + E E
Sbjct: 389 KPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAEN 448
Query: 283 VLKKKRKLGVAPRTNDYREFILGLI----VERRICEAKELGEVI-VSGKFT--------- 328
VL + K GV T Y + G + + K++ V V +FT
Sbjct: 449 VLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLV 508
Query: 329 ---IDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ +DVL V +I+ F+ M + +P T S++ + + +++E
Sbjct: 509 RMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEA 568
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+ ++ + + + Y +V+ C S R +A+ ++ M + G P + Y L+
Sbjct: 569 TSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSG 628
Query: 445 CCREDLLRPAKKL---------------W----DQMFASG----------------CSGN 469
E AK++ W D + G C +
Sbjct: 629 LICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPS 688
Query: 470 LKTYNILISKFSE 482
+TY +L + +
Sbjct: 689 HQTYAMLTEELPD 701
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%)
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
YN+++ + CR L A + M SG + T+N LI + +++ A LF M
Sbjct: 14 YNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
+G A D +Y +L+EG C+ + A E+F + D+ + +++
Sbjct: 74 LRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDMHMYAALV 119
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 106/480 (22%), Positives = 196/480 (40%), Gaps = 91/480 (18%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNK---ITLDSSV 121
S AL FFNWA Q+ +TH+ SY S+L+ L +R +N + L ++ + L++
Sbjct: 93 SKALQFFNWA-QEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARF 151
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDE 179
+ ++ + + Q++ VF +K + P + NSLL +L G + A K++DE
Sbjct: 152 FNSLMRNFNRAGLFQESIKVFTIMK--SHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDE 209
Query: 180 M-SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCK 238
M S GV T F + I FC N
Sbjct: 210 MLSTYGVTPDTFTFNILIRGFCMNG----------------------------------- 234
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK--KKRKLGVAPRT 296
V++ F++ ++L C+PD + Y + + G V V+K K+ + + P
Sbjct: 235 --MVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNV 292
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFM 356
Y I G +R I A+ F M
Sbjct: 293 VTYTTLIRGYCAKREI----------------------------------EKALAVFEEM 318
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT-DMESYNVMVSFLCTSGR 415
+ +G T + L K LC+ K +++ ++ + + + F+ D ++N ++ C +G
Sbjct: 319 VNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGN 378
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF-------ASGCSG 468
L +A V + M + PD + Y++L+ + C+ A+ L D++ GC
Sbjct: 379 LDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKP 438
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ YN + E G+ + A + F ++ +G D +Y +L+ G C+E ++ +E+
Sbjct: 439 LVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELL 497
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 38/218 (17%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P T + L + C D+ ++ LS D+ +YN +V LC +G++ A
Sbjct: 215 GVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVA 274
Query: 420 YGVIQEMKRKGLD--PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
Y V++ M +K +D P+V Y +L+ C + + A ++++M G N TYN LI
Sbjct: 275 YNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLI 334
Query: 478 S------KFSEV------------------------------GEIEGALRLFHNMLEKGV 501
KF ++ G ++ AL++F M E +
Sbjct: 335 KGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKI 394
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
PD+ TY++L+ LCQ + + A ++ +K + ++L+
Sbjct: 395 QPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLS 432
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 66/403 (16%), Positives = 151/403 (37%), Gaps = 54/403 (13%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++++ R+I +V +++ + ++ Y +I L + + +K +
Sbjct: 293 VTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEG 352
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ P+ C N+L+ G +D+ALK+F+ MS ++ + + + C+
Sbjct: 353 TAGD-GTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQG 411
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLI------------------------------ 232
+ +LD++ +R+ +++G L+
Sbjct: 412 GHYEKAEDLLDKLLERK-ILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRG 470
Query: 233 ----------IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
I G CK E +++L + ++ PDF Y + M
Sbjct: 471 TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQ 530
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI----VSGKFTIDDDVLNALI 338
L+K + P ++ + + L+ + R E+ L +++ + + + L
Sbjct: 531 SLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTGCVRLLF 590
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G+ + A + + KG + L + LC K + ++ + F
Sbjct: 591 GAGMN---DKAFQLVHLLYGKGYS---VKMEELIRYLCHCRKVIQGSKLLLFSLESHQFV 644
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
DM+ N ++ LC +L EA+ + ++ G+ +S N L
Sbjct: 645 DMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQQLSCQNQL 687
>gi|356574085|ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Glycine max]
Length = 733
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 126/587 (21%), Positives = 235/587 (40%), Gaps = 116/587 (19%)
Query: 2 TMRPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLL 61
T+ A+ + I++ I+ A R KW P + L +L ++P+LVA V+ +
Sbjct: 89 TLSSASLRLSPIARFIVDAFRRN--DNKWCPNVAAELSKL---RRITPNLVAEVLK--VQ 141
Query: 62 THHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSV 121
T+H+LA FF+WA Q + H+ SY+++ L+ Q A D + + ++
Sbjct: 142 TNHTLASKFFHWAGSQRGYHHNFASYNALAYCLNRHHQFRAADQLPELMESQGKPPSEKQ 201
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDE 179
+ +I + + V+ +++ N + P + N ++ L G++D AL ++D+
Sbjct: 202 FEILIRMHSDANRGLRVYHVYEKMR-NKFGVKPRVFLYNRVMDALVRTGHLDLALSVYDD 260
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
+ +E+ ++ SV ++++ G CK
Sbjct: 261 L-------------------------------------KEDGLVEESVTFMVLVKGLCKC 283
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
R++E +VL +R R CKPD AY + + G++ V ++ ++ V P Y
Sbjct: 284 GRIDEMLEVLGRMRERLCKPDVFAYTALVKILVPAGNLDACLRVWEEMKRDRVEPDVKAY 343
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
I+GL R+ E EL + +D + AL+ + + +
Sbjct: 344 ATMIVGLAKGGRVQEGYELFREMKGKGCLVDRVIYGALVEA---------------FVAE 388
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELV-EVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
G+V EL ++ K L ++ Y D+ Y ++ LC R+++
Sbjct: 389 GKV--------------------ELAFDLLKDLVSSGYRADLGIYICLIEGLCNLNRVQK 428
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS----------- 467
AY + Q R+GL+PD L+ A + + KL +QM G
Sbjct: 429 AYKLFQLTVREGLEPDFLTVKPLLVAYAEANRMEEFCKLLEQMQKLGFPVIADLSKFFSV 488
Query: 468 --------------GNLK--------TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
G LK YNI + ++GE++ AL LF M + PD+
Sbjct: 489 LVEKKGPIMALETFGQLKEKGHVSVEIYNIFMDSLHKIGEVKKALSLFDEMKGLSLKPDS 548
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
TY + + L ++ A N+ + + + + S+ LC+
Sbjct: 549 FTYCTAILCLVDLGEIKEACACHNRIIEMSCIPSVAAYSSLTKGLCQ 595
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 212/476 (44%), Gaps = 28/476 (5%)
Query: 51 LVARVINPYLLTHH-SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQ 109
L RV++ + T H LAL ++ ++ +++ ++K L +I+ + VL +
Sbjct: 237 LYNRVMDALVRTGHLDLALSVYD-DLKEDGLVEESVTFMVLVKGLCKCGRIDEMLEVLGR 295
Query: 110 VKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGY 169
++ D Y ++ L+ N V+ E+K + + + +++ LA G
Sbjct: 296 MRERLCKPDVFAYTALVKILVPAGNLDACLRVWEEMKRDRVEPDVKAYATMIVGLAKGGR 355
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+ ++F EM +G + +G + F K+ +L ++ G I
Sbjct: 356 VQEGYELFREMKGKGCLVDRVIYGALVEAFVAEGKVELAFDLLKDLVSSGYRADLG--IY 413
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRE-CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+ +I G C RV++A+K+ +L +RE +PDF+ + + + + E +L++ +
Sbjct: 414 ICLIEGLCNLNRVQKAYKLF-QLTVREGLEPDFLTVKPLLVAYAEANRMEEFCKLLEQMQ 472
Query: 289 KLGVAPRTNDYREFILGLIVERR--ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-D 345
KLG P D +F ++VE++ I + G++ G +++ + N + S+ I +
Sbjct: 473 KLGF-PVIADLSKF-FSVLVEKKGPIMALETFGQLKEKGHVSVE--IYNIFMDSLHKIGE 528
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME---- 401
+ A+ F+ M KG + + + LC +L E+ + + ++ +M
Sbjct: 529 VKKALSLFDEM--KGLSLKPDSFTYCTAILCLV----DLGEIKEACACHNRIIEMSCIPS 582
Query: 402 --SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL-MEACCREDLLRPAKKLW 458
+Y+ + LC G + EA ++++ D + F SL + C+ ++ +
Sbjct: 583 VAAYSSLTKGLCQIGEIDEAMLLVRDCLGNVSDGPLEFKYSLTIIHACKSNVAEKVIDVL 642
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT--YTSLL 512
++M GCS + Y +IS + G IE A ++F N+ E+ ++ T Y LL
Sbjct: 643 NEMIEQGCSLDNVIYCSIISGMCKHGTIEEARKVFSNLRERNFLTESNTIVYDELL 698
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 124/547 (22%), Positives = 228/547 (41%), Gaps = 89/547 (16%)
Query: 31 TPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSI 90
P LE L++ G+ L P L+ RV++ +L FF WA++QP + HS S+
Sbjct: 81 VPKLELALNESGI--DLRPGLIIRVLS-RCGDAGNLGYRFFLWATKQPGYFHSYEVCKSM 137
Query: 91 LKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCE 150
+ LS RQ A+ ++++++ K N E
Sbjct: 138 VMILSKMRQFGAVWGLIEEMR----------------------------------KTNPE 163
Query: 151 DIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS 210
I PE+ L+ AS + A+++ DEM G+E FG + C+N + +
Sbjct: 164 LIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASK 223
Query: 211 MLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
+ +++R++ + +++G+C+ ++ EA +VL +++ +PD + + +
Sbjct: 224 VFEDMREKFPPNLR---YFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSG 280
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI-VERRICEAKELGEVIVSGKFTI 329
+ G + + ++ RK G P N Y I L E+R+ EA + + ++
Sbjct: 281 YAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRV--FVEMERYGC 338
Query: 330 DDDVL--NALIGSVSS---IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ D++ ALI ID +++ + M +KG +P+ T + K+ + +E
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVL--DDMRKKGVMPSQVTYMQIMVAHEKKEQFEEC 396
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY------ 438
+E+ + + D+ YNV++ C G ++EA + EM+ GL P V +
Sbjct: 397 LELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMING 456
Query: 439 ----NSLMEAC---------------------------CREDLLRPAKKLWDQMF--ASG 465
L+EAC R+D L AK +W + S
Sbjct: 457 FTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSS 516
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
C N+ + I I G ++ A +M+E + P TY L++GL + N A
Sbjct: 517 CELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAA 576
Query: 526 EVFNKSV 532
E+ K V
Sbjct: 577 EITEKVV 583
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 161/340 (47%), Gaps = 8/340 (2%)
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ G V +++E+RK +I + VL+ F V++A +VLDE+ +PD
Sbjct: 146 QFGAVWGLIEEMRKTNPELIEPELFVVLM-RRFASANMVKKAVEVLDEMPKYGLEPDEYV 204
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+ + + GSV E V + R+ P + + G E ++ EAKE+ ++
Sbjct: 205 FGCLLDALCKNGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAKEV--LVQ 261
Query: 324 SGKFTIDDDVL---NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ ++ D++ N L G + A N M ++G P ++ + L + LC+ K
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEK 321
Query: 381 S-DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
DE + V+ + D+ +Y ++S C G + + Y V+ +M++KG+ P Y
Sbjct: 322 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+M A +++ +L ++M GC +L YN++I ++GE++ A+RL++ M
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
G++P T+ ++ G + L A F + V+ + A
Sbjct: 442 GLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSA 481
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 2/204 (0%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+ A+ + M + G P L LCK E +V++ + + ++ + +
Sbjct: 184 KKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR-EKFPPNLRYFTSL 242
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ C G+L EA V+ +MK GL+PD+ + +L+ + A L + M G
Sbjct: 243 LYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGF 302
Query: 467 SGNLKTYNILISKFSEVGE-IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
N+ Y +LI + ++ A+R+F M G D TYT+L+ G C+ + +
Sbjct: 303 EPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGY 362
Query: 526 EVFNKSVNHDVMLARSILSTFMIS 549
V + VM ++ M++
Sbjct: 363 SVLDDMRKKGVMPSQVTYMQIMVA 386
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 10/158 (6%)
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG---LDPDVSFYNSLMEACCREDLLR 452
YF E MV L + +G+I+EM++ ++P++ + LM ++++
Sbjct: 127 YFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPEL--FVVLMRRFASANMVK 184
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A ++ D+M G + + L+ + G ++ A ++F +M EK P+ +TSLL
Sbjct: 185 KAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLL 243
Query: 513 EGLCQETNLQAAFEVF----NKSVNHDVMLARSILSTF 546
G C+E L A EV + D+++ ++LS +
Sbjct: 244 YGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGY 281
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 201/443 (45%), Gaps = 37/443 (8%)
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLA 162
+D + VK + ++ Y+ ++ ++ ++ KAF V+ ++ + N LL
Sbjct: 172 LDRCVGLVKKWGLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLD 231
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
LA D +D A K+F++M R E T + + I + K + L++ + ++ ++
Sbjct: 232 ALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTL 291
Query: 223 INGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI-----VAE-EFKLMG 275
++IA +I KG+ ++A + ++ C+P+ Y + VAE + +
Sbjct: 292 ---NLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLD 348
Query: 276 SVFEREVVLKKKR----------KLGVAPRT----------------NDYREFILGLIVE 309
++ E K+ KLG + + Y + L
Sbjct: 349 NIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSS 408
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTL 368
+I EA +L T D + N + ++ + S I + M + G P + T
Sbjct: 409 GKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTY 468
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
+ L + + + D V++++ L ++ D+ SYN +++ L +G + EA+ +EM+
Sbjct: 469 NILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQE 528
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
KGL+PDV Y++L+E + D + A L+D+M A GCS NL TYNIL+ G
Sbjct: 529 KGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAE 588
Query: 489 ALRLFHNMLEKGVAPDATTYTSL 511
A+ L+ + ++G+ PD+ TY L
Sbjct: 589 AVDLYAKLKQQGLTPDSITYAVL 611
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 149/352 (42%), Gaps = 67/352 (19%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+++ K ++V++A+KV ++++ R C+PD Y I+ G E + + +
Sbjct: 228 MLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEK 287
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSSIDPRS 348
G F L LI + EA G + D VL + ++ + + +
Sbjct: 288 G----------FTLNLIAYNTMIEALAKGRMA-------DKAVLLFSKMVENGCQPNEFT 330
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS----ANDYFTDM---- 400
V N ++ +G++ L + +SK + V L A+ F +M
Sbjct: 331 YSVLLNVLVAEGQLNKLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVH 390
Query: 401 -----ESYNVMVSFLCTSGRLREA-----------------------------------Y 420
++Y M+ LC+SG++ EA +
Sbjct: 391 DKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIH 450
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+ ++MK+ G PD+ YN L+ + R + A K+++++ S C ++ +YN LI+
Sbjct: 451 DLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCL 510
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
+ G+++ A F M EKG+ PD TY++L+E + ++ A +F++ +
Sbjct: 511 GKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMI 562
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 415 RLRE---AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
RLR+ A+GV +M R G D+ +N L++A ++ + A K+++ M C +
Sbjct: 200 RLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTF 259
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKS 531
TY I+I + G+ + +L LF MLEKG + Y +++E L + A +F+K
Sbjct: 260 TYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKM 319
Query: 532 V 532
V
Sbjct: 320 V 320
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 97/215 (45%), Gaps = 4/215 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y S+L+SL S +I +L + IT D+ +Y + +L + K ++ ++
Sbjct: 397 AYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKM 456
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
K + N L++ G +D+A+K+F+E+ + + I + I +N +
Sbjct: 457 KQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDV 516
Query: 206 GQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ E++++ +N V+ +I F K +VE A + DE+ C P+ + Y
Sbjct: 517 DEAHMRFKEMQEKG---LNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTY 573
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
I+ + + G E + K ++ G+ P + Y
Sbjct: 574 NILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITY 608
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 138/558 (24%), Positives = 246/558 (44%), Gaps = 45/558 (8%)
Query: 2 TMRPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLL 61
+++ ++A +IS+ ++S+ ++ + TP L SL+ V +++ ++L
Sbjct: 23 SLKLNQEIAGKISKTLVSSGAKSL---QTTP---------SLLSSLNSQTVHLILSNHIL 70
Query: 62 THHSLALGFFNWASQQPNFTHSPL-SYHSILKSLSLSRQINAIDSVLKQVKV----NKIT 116
T S L FF++ + N+ L +Y +++ L SR+ + + K ++ N
Sbjct: 71 TAES-CLDFFHFI--RKNYYKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAA 127
Query: 117 LDSS--VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNAL 174
+D V +I SL+ NE K N + + L V A + AL
Sbjct: 128 VDDGLRVPVTVIASLVD--------DACNESKCNRAKFKEKFFDLLFRVYADNKMFGEAL 179
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LII 233
+ F+ M +G V++ + GQV S L R+ N + +V ++ +++
Sbjct: 180 EAFEHMEKKGFHIDERSCLVYLLAL---RRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVL 236
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF--KL-MGSVFEREVVLKKKRKL 290
G CK VE K++DE+ + K + + Y E + +L +G V E +L K
Sbjct: 237 DGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAE---ILTLMEKE 293
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG-SVSSIDPRSA 349
GVA Y I G +I EA+ L E + D V ++I + S + + A
Sbjct: 294 GVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRA 353
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+V F+ M +KG +P+ T L +CK + + + + + +N ++
Sbjct: 354 LVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDG 413
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
C SG + EA + M++KGL+ DV YNS+ C+ + AK L M G S N
Sbjct: 414 YCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPN 473
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF---- 525
++ LI + + G A R+F M EKG P+ TY L++G + N++ A
Sbjct: 474 TMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKD 533
Query: 526 EVFNKSVNHDVMLARSIL 543
E+ N+ + DV S++
Sbjct: 534 ELENRGLIPDVYTCTSLI 551
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 185/392 (47%), Gaps = 3/392 (0%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
+L L G ++ K+ DE++ +GV+ + + + FI + + LG V +L + ++E
Sbjct: 235 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEIL-TLMEKE 293
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
N V L+IHGF ++EEA ++ +E+R + + D Y + G+V
Sbjct: 294 GVACN-VVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKR 352
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
V+ + G+ P + Y I G+ ++ A+ L + ++ + N LI
Sbjct: 353 ALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLID 412
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G S A+ M +KG + ++++ LCK N+ DE + +
Sbjct: 413 GYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSP 472
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+ S+ ++ C G EA V +EM+ KG P++ YN L++ + ++ A KL
Sbjct: 473 NTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLK 532
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
D++ G ++ T LI G+++ AL+LF M ++G+ P+ TYT+++ GL ++
Sbjct: 533 DELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKD 592
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
+ AF+++++ + ++ S+ + SL
Sbjct: 593 GRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 173/431 (40%), Gaps = 71/431 (16%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y++ ++ + + +L ++ + + Y +I ++A +F E
Sbjct: 265 VTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEE 324
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ + + S+++ G + AL +FDEM+ +G+ S +G I C+ +
Sbjct: 325 MREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQ 384
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ +++E++ + + VI +I G+C+ V+EA ++ + + + D AY
Sbjct: 385 MEAAQMLVNEMQGKGIDL--NPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAY 442
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+A + E + +L + GV+P T + I E EAK +
Sbjct: 443 NSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRV------ 496
Query: 325 GKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
F M EKG VP + T
Sbjct: 497 ----------------------------FREMEEKGNVPNIIT----------------- 511
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
YNV++ G ++EA+ + E++ +GL PDV SL+
Sbjct: 512 ------------------YNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHG 553
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C + + A KL+D+M G N+ TY +IS S+ G E A +L+ M E G+ PD
Sbjct: 554 ECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPD 613
Query: 505 ATTYTSLLEGL 515
T Y+SL+ L
Sbjct: 614 DTVYSSLVGSL 624
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 76/151 (50%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
S +++ LC G + ++ E+ KG+ +V YN+ +E + L ++ M
Sbjct: 231 SLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLM 290
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G + N+ TY +LI FS +G+IE A RLF M EKG+ D YTS++ C+ N+
Sbjct: 291 EKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNV 350
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ A +F++ + ++ + + +C+
Sbjct: 351 KRALVLFDEMTDKGLIPSAHTYGALIHGVCK 381
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 97/209 (46%)
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
S + FF M+ T+ +L+ + LCKR + ++ ++A ++ +YN +
Sbjct: 212 SCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFI 271
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
L ++ M+++G+ +V Y L+ + A++L+++M G
Sbjct: 272 EGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIE 331
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
++ Y +IS G ++ AL LF M +KG+ P A TY +L+ G+C+ ++AA +
Sbjct: 332 ADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQML 391
Query: 528 FNKSVNHDVMLARSILSTFMISLCRRVLI 556
N+ + L I +T + C ++
Sbjct: 392 VNEMQGKGIDLNPVIFNTLIDGYCESGMV 420
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/467 (21%), Positives = 204/467 (43%), Gaps = 42/467 (8%)
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLL 161
A+D + + + + Y +I + ++ N ++A V +E+ + SL+
Sbjct: 293 ALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLI 352
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
+ + AL F+ M G+ + F V I FC+N ++ + + E+ KR S
Sbjct: 353 TGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAV----EIYKRMKS 408
Query: 222 ------------MINGSVIA---------------VLIIHGF---------CKGKRVEEA 245
MI G + A I HGF CK +V+ A
Sbjct: 409 VGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAA 468
Query: 246 FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
L + + +P+ + Y + M ++ + + + G+ P Y I G
Sbjct: 469 TSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDG 528
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI--VFFNFMIEKGRVP 363
+ A E+ +++ F ++ + N +I + + S + N + EK
Sbjct: 529 FFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSM 588
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
++ +++ K +D VE Y+ +S N ++ ++ +++ C S R+ A +I
Sbjct: 589 GCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMI 648
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
EMK K L DV Y +L++ C+++ ++ A L+ ++ G N+ YN LIS F +
Sbjct: 649 HEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNL 708
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
G+++ A+ L+ M+ G++ D TYT++++GL ++ NL A +++++
Sbjct: 709 GKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSE 755
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/457 (21%), Positives = 192/457 (42%), Gaps = 47/457 (10%)
Query: 67 ALGFFNWASQQ---PNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYR 123
AL FFN ++ P+ + K++ + + + + K++K I S +
Sbjct: 364 ALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAV----EIYKRMKSVGIAPSSVLVH 419
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHR 183
+I ++ ++ + A +FN+ F +CN + +L G +D A M ++
Sbjct: 420 KMIQGCLKAESPEAALEIFND-SFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMENK 478
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G+E + + + + C + S+ E+ E + + ++I GF K + +
Sbjct: 479 GIEPNVVFYNNMMLAHCRMKNMDLARSIFSEML--EKGLQPNNFTYSILIDGFFKNQDEQ 536
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
A++V++++ + S FE V+ Y I
Sbjct: 537 NAWEVINQM---------------------IASNFEANEVI--------------YNTII 561
Query: 304 LGLIVERRICEAKE-LGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGR 361
GL + +AKE L +I ++++ N++I G D SA+ + M E G
Sbjct: 562 NGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGI 621
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P + T ++L CK N+ D +E+ + + D D+ +Y ++ C ++ AY
Sbjct: 622 SPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYT 681
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+ E+ GL P+VS YN+L+ + A L+ +M G S +L TY +I
Sbjct: 682 LFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLL 741
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ G + A L+ +L G+ PD Y L+ GL ++
Sbjct: 742 KDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKK 778
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/415 (20%), Positives = 170/415 (40%), Gaps = 68/415 (16%)
Query: 155 EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
E S++ +G ++ A+K+ DEM G+ S I I FC +LG+ L +
Sbjct: 311 ETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFN- 369
Query: 215 VRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
R E + V+ ++I FCK +E+A ++
Sbjct: 370 -RMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIY------------------------- 403
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG----EVIVSGKFTID 330
K+ + +G+AP + + I G + A E+ E ++ F +
Sbjct: 404 ----------KRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCN 453
Query: 331 DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD-------E 383
L L+ +D +A F M KG P + +N+ C+ D E
Sbjct: 454 KIFL--LLCKQGKVD--AATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSE 509
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
++E K L N++ +Y++++ + + A+ VI +M + + YN+++
Sbjct: 510 MLE--KGLQPNNF-----TYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIIN 562
Query: 444 ACCREDLLRPAKKLWDQM-----FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
C+ AK++ + ++ GC+ +YN +I F + G+ + A+ + M E
Sbjct: 563 GLCKVGQTSKAKEMLQNLIKEKRYSMGCT----SYNSIIDGFFKEGDTDSAVEAYREMSE 618
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
G++P+ T+TSL+ G C+ + A E+ ++ + D+ L + C++
Sbjct: 619 NGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKK 673
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 93/207 (44%), Gaps = 1/207 (0%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ FN M+++ VP + ++N+ +L + N DE E+Y + D + +++
Sbjct: 188 AVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMR 247
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR-EDLLRPAKKLWDQMFASGCS 467
+ EA + + + +G +PD ++ ++A C+ +DL+ L + G
Sbjct: 248 ASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVP 307
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
+ +TY +I + G +E A+++ M+ G+ TSL+ G C L A +
Sbjct: 308 ASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDF 367
Query: 528 FNKSVNHDVMLARSILSTFMISLCRRV 554
FN+ + + + S + C+ +
Sbjct: 368 FNRMEEEGLAPDKVMFSVMIEWFCKNM 394
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 183/440 (41%), Gaps = 51/440 (11%)
Query: 119 SSVYRFIIPSLIQGKNTQKAFS-VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMF 177
SS YRF+ P Q ++ + + VF+E++F + GP + L++ +D ++D+A +
Sbjct: 26 SSQYRFLHPPDNQSRDISDSTTEVFSELEFPHKASGPN-HSPLISTSETDNHVDDAHVIE 84
Query: 178 DEMSHRGVEFSTIGFGVFI---WKFCENAKLGQVLSML----DEVRKRENSMI------N 224
+ R S + + ++ CE + VL + R ++++ N
Sbjct: 85 VLLGRRNDPVSALQYCNWVKPLRSLCEGGDVFWVLIHILFSSPHTHDRASNLLVMFVSSN 144
Query: 225 GSVIAVLIIHGFC-KGKRVE-----EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
++I +++ KR + AF L IR + D+ + F LM
Sbjct: 145 PTLIPSAMVNNLVDSSKRFDFELSSRAFNYLLNAYIRNRRMDY-----AVDCFNLM---V 196
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNAL 337
+R VV P N+ + L+ I EAKE+ ++++ G D+V L
Sbjct: 197 DRNVV-------PFVPYVNN---VLSSLVRSNLIDEAKEIYNKMVLIG--VAGDNVTTQL 244
Query: 338 I--GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL---- 391
+ S+ P A+ F ++ +G P S + CK +LV +L
Sbjct: 245 LMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMK---DLVMALDLLREMR 301
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
E+Y ++ G + EA V EM G+ V SL+ C + L
Sbjct: 302 EKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNEL 361
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A +++M G + + ++++I F + E+E A+ ++ M G+AP + +
Sbjct: 362 GKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKM 421
Query: 512 LEGLCQETNLQAAFEVFNKS 531
++G + + +AA E+FN S
Sbjct: 422 IQGCLKAESPEAALEIFNDS 441
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 138/558 (24%), Positives = 246/558 (44%), Gaps = 45/558 (8%)
Query: 2 TMRPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLL 61
+++ ++A +IS+ ++S+ ++ + TP L SL+ V +++ ++L
Sbjct: 19 SLKLNQEIAGKISKTLVSSGAKSL---QTTP---------SLLSSLNSQTVHLILSNHIL 66
Query: 62 THHSLALGFFNWASQQPNFTHSPL-SYHSILKSLSLSRQINAIDSVLKQVKV----NKIT 116
T S L FF++ + N+ L +Y +++ L SR+ + + K ++ N
Sbjct: 67 TAES-CLDFFHFI--RKNYYKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAA 123
Query: 117 LDSS--VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNAL 174
+D V +I SL+ NE K N + + L V A + AL
Sbjct: 124 VDDGLRVPVTVIASLVD--------DACNESKCNRAKFKEKFFDLLFRVYADNKMFGEAL 175
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LII 233
+ F+ M +G V++ + GQV S L R+ N + +V ++ +++
Sbjct: 176 EAFEHMEKKGFHIDERSCLVYLLAL---RRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVL 232
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF--KL-MGSVFEREVVLKKKRKL 290
G CK VE K++DE+ + K + + Y E + +L +G V E +L K
Sbjct: 233 DGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAE---ILTLMEKE 289
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG-SVSSIDPRSA 349
GVA Y I G +I EA+ L E + D V ++I + S + + A
Sbjct: 290 GVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRA 349
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+V F+ M +KG +P+ T L +CK + + + + + +N ++
Sbjct: 350 LVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDG 409
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
C SG + EA + M++KGL+ DV YNS+ C+ + AK L M G S N
Sbjct: 410 YCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPN 469
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF---- 525
++ LI + + G A R+F M EKG P+ TY L++G + N++ A
Sbjct: 470 TMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKD 529
Query: 526 EVFNKSVNHDVMLARSIL 543
E+ N+ + DV S++
Sbjct: 530 ELENRGLIPDVYTCTSLI 547
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 185/392 (47%), Gaps = 3/392 (0%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
+L L G ++ K+ DE++ +GV+ + + + FI + + LG V +L + ++E
Sbjct: 231 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEIL-TLMEKE 289
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
N V L+IHGF ++EEA ++ +E+R + + D Y + G+V
Sbjct: 290 GVACN-VVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKR 348
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
V+ + G+ P + Y I G+ ++ A+ L + ++ + N LI
Sbjct: 349 ALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLID 408
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G S A+ M +KG + ++++ LCK N+ DE + +
Sbjct: 409 GYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSP 468
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+ S+ ++ C G EA V +EM+ KG P++ YN L++ + ++ A KL
Sbjct: 469 NTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLK 528
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
D++ G ++ T LI G+++ AL+LF M ++G+ P+ TYT+++ GL ++
Sbjct: 529 DELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKD 588
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
+ AF+++++ + ++ S+ + SL
Sbjct: 589 GRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 76/151 (50%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
S +++ LC G + ++ E+ KG+ +V YN+ +E + L ++ M
Sbjct: 227 SLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLM 286
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G + N+ TY +LI FS +G+IE A RLF M EKG+ D YTS++ C+ N+
Sbjct: 287 EKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNV 346
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ A +F++ + ++ + + +C+
Sbjct: 347 KRALVLFDEMTDKGLIPSAHTYGALIHGVCK 377
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 97/209 (46%)
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
S + FF M+ T+ +L+ + LCKR + ++ ++A ++ +YN +
Sbjct: 208 SCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFI 267
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
L ++ M+++G+ +V Y L+ + A++L+++M G
Sbjct: 268 EGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIE 327
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
++ Y +IS G ++ AL LF M +KG+ P A TY +L+ G+C+ ++AA +
Sbjct: 328 ADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQML 387
Query: 528 FNKSVNHDVMLARSILSTFMISLCRRVLI 556
N+ + L I +T + C ++
Sbjct: 388 VNEMQGKGIDLNPVIFNTLIDGYCESGMV 416
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 113/265 (42%), Gaps = 6/265 (2%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF--S 140
S +Y +++ + + Q+ A ++ +++ I L+ ++ +I + +A
Sbjct: 364 SAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQ 423
Query: 141 VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
V E K D+ NS+ + L D A + M RGV +T+ F I +C
Sbjct: 424 VVMEKKGLESDVFAY--NSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYC 481
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + + E+ ++ N + + ++I G+ K ++EA K+ DEL R PD
Sbjct: 482 KEGNFVEAKRVFREMEEKGN--VPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPD 539
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ + G V + + + G+ P Y I GL + R EA +L +
Sbjct: 540 VYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYD 599
Query: 321 VIVSGKFTIDDDVLNALIGSVSSID 345
+ T DD V ++L+GS+ S +
Sbjct: 600 EMKETGLTPDDTVYSSLVGSLHSAE 624
>gi|357494871|ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519059|gb|AET00683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 861
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 120/253 (47%), Gaps = 5/253 (1%)
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDPRSAIVFFNFMIEK 359
I E ++ EL ++ +D+ V NALI D S I+ + MI
Sbjct: 208 IKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEIL--HIMIAM 265
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
P++ T + L KR K+DE V+ L YF D Y ++ C G L EA
Sbjct: 266 KCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEA 325
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ EM +KGL P+ YN ++ C+ A+KL+D M G + N+ +Y+ +IS
Sbjct: 326 RKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISG 385
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
G+ + AL LFH M KG+A D +Y SL++GLCQE L A + NK + + +
Sbjct: 386 LYLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPS 445
Query: 540 RSILSTFMISLCR 552
S + + LC+
Sbjct: 446 VSSFTPLIKCLCK 458
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 198/472 (41%), Gaps = 59/472 (12%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
L+L F +W + F S +++ +L + + A S+L+ + + S+ ++
Sbjct: 79 LSLRFLHWLTSHCGFKPDQSSCNALFDALVDAGAVKAAKSLLEYPDF--VPKNDSLEGYV 136
Query: 126 IPSLIQGKN--TQKAFSVF---NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
+ G+N ++ F VF +V F +C LLA L G D K+++ M
Sbjct: 137 ---RLLGENGMVEEVFDVFVSLKKVGFLPSASSFNVC--LLACLKV-GRTDLVWKLYELM 190
Query: 181 --SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR----ENSMINGSVIAVLIIH 234
S GV G I FC K+ +L +V ++ +N++ N +I+
Sbjct: 191 IESGVGVNIDVETVGCLIKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNA------LIN 244
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
GFCK K+ + ++L + +C P Y+ + E V + G P
Sbjct: 245 GFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFP 304
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFN 354
Y I G + EA++L +F
Sbjct: 305 DRVMYTTVIKGFCDMGLLAEARKL---------------------------------WFE 331
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
MI+KG VP T + + CK E ++Y + Y ++ SY+ M+S L G
Sbjct: 332 -MIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHG 390
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ EA + EM RKG+ D+ YNSL++ C+E L A L +++ G ++ ++
Sbjct: 391 KTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFT 450
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
LI +VG+ EGA+RL +M ++ + P A+T+ ++ GL ++ + E
Sbjct: 451 PLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIGLSKKGDFAQGME 502
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 171/403 (42%), Gaps = 45/403 (11%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEI--CNSLLAVLASDGYIDNAL 174
D Y +I L + NT A + V+ NC+ P + N+++ L D + A
Sbjct: 132 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQ---PNVFAYNTIIDSLCKDRQVTEAF 188
Query: 175 KMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LII 233
+F EM +G+ + I C + V ++L+E+ +S I V++ ++
Sbjct: 189 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEM---VDSKIMPDVVSFNTVV 245
Query: 234 HGFCKGKRVEEAFKVLDELRIRE-CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
CK +V EA V+D++ R C P+ I+Y + + + + + + + + +
Sbjct: 246 DALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQEL 305
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVF 352
P T Y I GL C + L + AI
Sbjct: 306 IPDTVTYSTLIHGL------CHVERL----------------------------QDAIAL 331
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F+ M+ ++P L T L LCK E + + K + ++ D++ N+ + +C
Sbjct: 332 FHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCR 391
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
+G L A + + KGL PDV Y+ ++ CR LL A KL+ +M +GC+ N
Sbjct: 392 AGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCI 451
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
YN + F E A++L M+ +G + DA+T T ++ L
Sbjct: 452 YNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML 494
>gi|15228104|ref|NP_181260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216851|sp|Q9ZUU3.1|PP190_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37230
gi|4056478|gb|AAC98044.1| unknown protein [Arabidopsis thaliana]
gi|28973644|gb|AAO64144.1| unknown protein [Arabidopsis thaliana]
gi|110736716|dbj|BAF00321.1| hypothetical protein [Arabidopsis thaliana]
gi|330254276|gb|AEC09370.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 757
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 116/524 (22%), Positives = 231/524 (44%), Gaps = 27/524 (5%)
Query: 28 RKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSY 87
R WT L+ ++ L SLV V++ H AL FF W + H ++
Sbjct: 98 RAWTTRLQNSIRDL--VPEWDHSLVYNVLHGAKKLEH--ALQFFRWTERSGLIRHDRDTH 153
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
++K L ++N +L + + D ++ +I S + Q++ +F ++K
Sbjct: 154 MKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMK- 212
Query: 148 NCEDIGPEIC----NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
D+G E NSL V+ G A + F++M GVE + + + +W F +
Sbjct: 213 ---DLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSL 269
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+L L ++++ R S + + +I+GFC+ K+++EA K+ E++ + P ++
Sbjct: 270 RLETALRFFEDMKTRGISPDDATFNT--MINGFCRFKKMDEAEKLFVEMKGNKIGPSVVS 327
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
Y + + + + V + + ++ R G+ P Y + GL ++ EAK + + ++
Sbjct: 328 YTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMM 387
Query: 324 SGKFTIDDD--VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR--- 378
+ D+ L L+ + D +A M L +N CK
Sbjct: 388 AKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAY 447
Query: 379 NKS----DELVEVYKVLSANDYFTDME--SYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
N++ D L+E +L D +ME +YN ++ +LC +G+ +A + +++ ++G+
Sbjct: 448 NRAIKLLDTLIEKEIILRHQDTL-EMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ 506
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
D N+L+ +E + ++ M G Y +LI + GE A
Sbjct: 507 -DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTA 565
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+M+E G PD++ + S++E L ++ +Q A V ++ +V
Sbjct: 566 LDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNV 609
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 20/234 (8%)
Query: 330 DDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
D+D+ LI S + ++ F M + G T+ + ++L K + +R +
Sbjct: 184 DEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR-------- 235
Query: 389 KVLSANDYFTDM---------ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ A YF M +YN+M+ S RL A ++MK +G+ PD + +N
Sbjct: 236 -YMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFN 294
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+++ CR + A+KL+ +M + ++ +Y +I + V ++ LR+F M
Sbjct: 295 TMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSS 354
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVF-NKSVNHDVMLARSILSTFMISLCR 552
G+ P+ATTY++LL GLC + A + N H SI ++S +
Sbjct: 355 GIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSK 408
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D +++ M+ L +L A ++ +M KG+ D + L+E+ + +++ + K++
Sbjct: 149 DRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIF 208
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M G +K+YN L G A R F+ M+ +GV P TY +L G
Sbjct: 209 QKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLS 268
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L+ A F + + +T + CR
Sbjct: 269 LRLETALRFFEDMKTRGISPDDATFNTMINGFCR 302
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 182/405 (44%), Gaps = 31/405 (7%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N ++A L G +ALK+FDEM GV + I + I + L R
Sbjct: 198 NVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGF------RL 251
Query: 218 RENSMINGS----VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE---- 269
R+ + +G V +++ G C+ R++E ++DE+ PD Y I+ +
Sbjct: 252 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 311
Query: 270 --EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL--GLIVERRICEAKELGEVIVSG 325
E + M S+F LKK LG Y IL GL + ++ +A+++ E++V
Sbjct: 312 TGESRTMLSLFAES--LKKGVMLGA------YTCSILLNGLCKDGKVAKAEQVLEMLVHT 363
Query: 326 KFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ N LI + D R A F M + P T + L LCK +
Sbjct: 364 GLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKA 423
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
++ + + +E++N ++ T+G+L + + V+ +M++KG+ DV + S+++A
Sbjct: 424 EDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKA 483
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C+ + A + D M + N + YN +I + E G+ E A L M GV+
Sbjct: 484 FCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSAS 543
Query: 505 ATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSILST 545
TY LL+GLC+ + + A E+ N+ + DV+ +I+S
Sbjct: 544 IVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISA 588
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/431 (20%), Positives = 183/431 (42%), Gaps = 7/431 (1%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PN ++Y+ +L L + +++ ++ ++ + + D Y + L + ++
Sbjct: 261 KPNI----VTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESR 316
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
S+F E +G C+ LL L DG + A ++ + + H G+ +T+ + I
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLI 376
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
+C+ L + ++++ R + + +I+G CK + V +A ++ E+
Sbjct: 377 NGYCQVRDLRGAFCIFEQMKSRH--IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 434
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
P + + + + G + + VL ++ G+ + + +I EA
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 494
Query: 317 ELGEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ + ++ + V N++I + + S D A + M G ++ T + L K L
Sbjct: 495 AILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGL 554
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C+ ++ DE E+ L D+ SYN ++S C G +A ++QEM + G+ P +
Sbjct: 555 CRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTL 614
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y++L+ A + + L+ QM + Y I++ + L
Sbjct: 615 RTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKE 674
Query: 496 MLEKGVAPDAT 506
M EKG+A D T
Sbjct: 675 MSEKGIAFDDT 685
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 163/382 (42%), Gaps = 3/382 (0%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN LL L G + F + G T + + L L+M+ +
Sbjct: 125 CNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMG 184
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
+ E + + ++I G + + +A KV DE+ P++I Y + + + G
Sbjct: 185 RSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDG-HVKGG 243
Query: 277 VFEREVVLKKKR-KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E L+ + G P Y + GL R+ E + L + + S D +
Sbjct: 244 DLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYS 303
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
L G + + R+ + F ++KG + T S L LCK K + +V ++L
Sbjct: 304 ILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHT 363
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
YN +++ C LR A+ + ++MK + + PD YN+L+ C+ +++ A
Sbjct: 364 GLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKA 423
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+ L +M SG +++T+N LI + G++E + +M +KG+ D ++ S+++
Sbjct: 424 EDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKA 483
Query: 515 LCQETNLQAAFEVFNKSVNHDV 536
C+ + A + + + DV
Sbjct: 484 FCKNGKIPEAVAILDDMIYKDV 505
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 158/351 (45%), Gaps = 21/351 (5%)
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG---QVLSMLDEVRKRENSMINGSVIAV 230
L +F E +GV + + C++ K+ QVL ML ++ +VI
Sbjct: 319 LSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEML-----VHTGLVPTTVIYN 373
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I+G+C+ + + AF + ++++ R +PD I Y + + V + E ++ + K
Sbjct: 374 TLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKS 433
Query: 291 GVAPRTNDYREFI--LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS 348
GV P + I G + C L ++ G I DV++ GSV ++
Sbjct: 434 GVDPSVETFNTLIDAYGTAGQLEKC-FTVLSDMQQKG---IKSDVIS--FGSVVKAFCKN 487
Query: 349 -----AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
A+ + MI K P +++ + +++ + + + + + +Y
Sbjct: 488 GKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTY 547
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N+++ LC S ++ EA +I ++ +GL PDV YN+++ ACC + A +L +M
Sbjct: 548 NLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNK 607
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
G L+TY+ L+S + G + L+ ML K V P ++ Y +++
Sbjct: 608 YGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDA 658
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 74/154 (48%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D SYNV+++ L SG+ +A V EM G+ P+ YN++++ + L +L
Sbjct: 193 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLR 252
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
DQM G N+ TYN+L+S G ++ L M + PD TY+ L +GL +
Sbjct: 253 DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 312
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ +F +S+ VML S + LC+
Sbjct: 313 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCK 346
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 91/204 (44%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F+ M++ G VP T + + K + + + + ++ +YNV++S
Sbjct: 213 ALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLS 272
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC +GR+ E ++ EM + PD Y+ L + R R L+ + G
Sbjct: 273 GLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVML 332
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
T +IL++ + G++ A ++ ++ G+ P Y +L+ G CQ +L+ AF +F
Sbjct: 333 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 392
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
+ + + + + LC+
Sbjct: 393 EQMKSRHIRPDHITYNALINGLCK 416
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 400 MESYNVMVSFLCTSGR---LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ S N+++ L GR +R A+G++ G PD +N +++AC L A
Sbjct: 122 LSSCNLLLESLLFVGRHADVRAAFGLLVA---AGARPDTFAWNKVVQACVAAGDLDVALA 178
Query: 457 LWDQMFAS--GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+ +M S + +YN++I+ G+ AL++F M++ GV P+ TY ++++G
Sbjct: 179 MVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDG 238
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS-LCR 552
+ +L+A F + ++ + HD + ++S LCR
Sbjct: 239 HVKGGDLEAGFRLRDQML-HDGPKPNIVTYNVLLSGLCR 276
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 63/142 (44%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
QQ +S+ S++K+ + +I ++L + + ++ VY II + I+ +T
Sbjct: 466 QQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDT 525
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
++AF + ++K + N LL L ID A ++ + ++G+ + +
Sbjct: 526 EQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTI 585
Query: 196 IWKFCENAKLGQVLSMLDEVRK 217
I C + L +L E+ K
Sbjct: 586 ISACCNKGDTDKALELLQEMNK 607
>gi|14488297|gb|AAK63878.1|AC074105_7 Putative salt-inducible protein [Oryza sativa]
gi|222612440|gb|EEE50572.1| hypothetical protein OsJ_30721 [Oryza sativa Japonica Group]
Length = 854
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 199/475 (41%), Gaps = 40/475 (8%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALK 175
D+ Y ++ + AF++F+E++ P I N L+ L +G + A
Sbjct: 260 DACSYNILMKGHCLYGQAEDAFNLFDEMRVT--GCCPTIVTYNILMNELCREGRMVEARM 317
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFC-----ENA--------------------------- 203
+FDEM GVE +TI F V I + ENA
Sbjct: 318 LFDEMLQAGVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAY 377
Query: 204 KLGQV-LSMLDEVRKRE--NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
K G+ L +LD+ + E S ++ I +LI C R+++A+++L + +
Sbjct: 378 KFGKAALFVLDQQQLHEMFGSQLSTDGIDMLICR-LCWDGRLDDAWELLCSAIEKGVQVS 436
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ + + G E + K KLG+AP ++ I+GL R+ +A+ E
Sbjct: 437 VSGFNALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLE 496
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+V + + L S + D A+ ++ M G P S LC+ +
Sbjct: 497 YMVRMGYCVIASFTIYLDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDF 556
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
DE + + + +YN ++S C +G + EA + Q+M++ GL PD+ N
Sbjct: 557 LDEAYNGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNI 616
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
L++ CRE L A L+ M++ G + ++ TYN +++ + +I GA+ + ML G
Sbjct: 617 LIDGFCREGGLNTANNLFFGMYSIGLTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADG 676
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
PD TY + LC L A + ++ D +T M +C VL
Sbjct: 677 CEPDIFTYNIWMHSLCSNHLLNRAMMLLDELAATDCAPNSVTYNTLMDGICSDVL 731
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 179/454 (39%), Gaps = 77/454 (16%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G + A K+F+EM+ RG + F I+ C L +V L V R + + +
Sbjct: 205 GEVRAAWKVFEEMAARGPRPNLAIFNAMIFGLCHRG-LVRVSGGLLGVMGRFHVVPDACS 263
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+L + G C + E+AF + DE+R+ C P + Y I+ E G + E ++ +
Sbjct: 264 YNIL-MKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEM 322
Query: 288 RKLGVAPRTNDYREFILGLIVERRI-------CEAKELG--------EVIVSGK------ 326
+ GV T + I G ++ E K +G ++ +G
Sbjct: 323 LQAGVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGKA 382
Query: 327 --FTIDDDVLNALIGSVSSIDPRSAIV--------------FFNFMIEKGRVPTLSTLSN 370
F +D L+ + GS S D ++ IEKG ++S +
Sbjct: 383 ALFVLDQQQLHEMFGSQLSTDGIDMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFNA 442
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA----------- 419
L K +E E+YK ++ + N ++ LC GRL +A
Sbjct: 443 LIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMVRMG 502
Query: 420 YGVI-----------------------QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
Y VI +MK GL PD +++ + CR D L A
Sbjct: 503 YCVIASFTIYLDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEAYN 562
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ +M G N TYN LIS F G + AL+L M + G+ PD T L++G C
Sbjct: 563 GFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILIDGFC 622
Query: 517 QETNLQAA----FEVFNKSVNHDVMLARSILSTF 546
+E L A F +++ + DV+ ++L+ +
Sbjct: 623 REGGLNTANNLFFGMYSIGLTPDVVTYNTMLNAY 656
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 132/328 (40%), Gaps = 5/328 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+A + +G+ + A +++ M+ G+ S+ I C +L Q L+ + +
Sbjct: 441 NALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMVR 500
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+I + + + F G V A K D+++I +PDF+A+ + +
Sbjct: 501 MGYCVI--ASFTIYLDSSFRAGD-VLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFL 557
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E + + G+ P Y I + EA +L + + D N L
Sbjct: 558 DEAYNGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNIL 617
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G +A F M G P + T + + C+ + + + A+
Sbjct: 618 IDGFCREGGLNTANNLFFGMYSIGLTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGC 677
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ +YN+ + LC++ L A ++ E+ P+ YN+LM+ C D+L A
Sbjct: 678 EPDIFTYNIWMHSLCSNHLLNRAMMLLDELAATDCAPNSVTYNTLMDGIC-SDVLDRAMI 736
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVG 484
L ++ N T NIL S F + G
Sbjct: 737 LTGRLIKLAFQPNTVTINILFSHFCKNG 764
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%)
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+G EA V+ ++R G P +S +L+ R +R A K++++M A G NL
Sbjct: 168 AAGMADEALDVLARVRRAGDTPSLSALAALLRLLFRGGEVRAAWKVFEEMAARGPRPNLA 227
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+N +I G + + L M V PDA +Y L++G C + AF +F++
Sbjct: 228 IFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACSYNILMKGHCLYGQAEDAFNLFDE 286
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 206/494 (41%), Gaps = 46/494 (9%)
Query: 87 YHSILKSLSLSRQIN-AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+ +LK L +++++ A D +L+++ TL+ Y ++ L K ++A + + +
Sbjct: 131 FGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMM 190
Query: 146 KFNCEDIGPEICNSLLAVLASDG-----YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+ + G N + DG +D A +F M +GV + + I +
Sbjct: 191 ADDGD--GSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYL 248
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
K +V+ ML E+ + + VI +++ CK R EA + D L + KP
Sbjct: 249 STGKWKEVVQMLQEMST--HGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPH 306
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
Y I+ + G++ E L + GV+P + + + I EA + +
Sbjct: 307 VTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFD 366
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+ + ALI ++ + A++ FN MI +G P + S+L LC +
Sbjct: 367 KMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVD 426
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K ++ +++ + + +N+++ LC GR+ EA +I M R + PDV YN
Sbjct: 427 KWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYN 486
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+L++ C + A KL D M + G + TYN L+ + + I+ A LF ML K
Sbjct: 487 TLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMK 546
Query: 500 GVAP-----------------------------------DATTYTSLLEGLCQETNLQAA 524
G+ P D TYT +L GLC+ + A
Sbjct: 547 GLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEA 606
Query: 525 FEVFNKSVNHDVML 538
F++F + D+ L
Sbjct: 607 FKMFQSLCSKDLQL 620
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 187/430 (43%), Gaps = 9/430 (2%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y +L + ++ + S L + N ++ D ++ + + + +A +F+ K
Sbjct: 310 YGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFD--K 367
Query: 147 FNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + P + N +L+ L G +D+A+ F++M + GV F ++ C K
Sbjct: 368 MRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDK 427
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+ + EV + +N + +L+ + C+ RV EA +++D + + +PD I+Y
Sbjct: 428 WEKAEKLFFEVLD-QGIRLNAAFFNILMCN-LCREGRVMEAQRLIDLMLRVDVRPDVISY 485
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + L G + E +L +G+ P Y + G RRI +A L ++
Sbjct: 486 NTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLM 545
Query: 325 GKFTIDDDVLNALIGSVSSIDP--RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
T N ++ + I + ++ N MI R + T + + LC+ N D
Sbjct: 546 KGLTPGVVTYNTILHGLFQIGRFCEAKELYLN-MINNRRKCDIYTYTIILNGLCRNNFVD 604
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E ++++ L + D D+ + N+M+ L GR +A + + GL PDV Y +
Sbjct: 605 EAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIA 664
Query: 443 EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
E +E L +L+ M +G + N + N L+ G+I A + EK +
Sbjct: 665 ENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFS 724
Query: 503 PDATTYTSLL 512
+A+T + L+
Sbjct: 725 LEASTTSMLI 734
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 158/371 (42%), Gaps = 8/371 (2%)
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
S+ + + I FC +L + + K S+ N +VI ++ G C KRV+EA
Sbjct: 91 SSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSL-NNTVIFGQLLKGLCDAKRVDEATD 149
Query: 248 VLDELRIRE--CKPDFIAYRIVAEEF---KLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
+L R+ E C + I+Y I+ + K E ++ P Y
Sbjct: 150 ILLR-RMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTV 208
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGR 361
I GL + + AK + + ++ ++ LI G +S+ + + M G
Sbjct: 209 IDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGL 268
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P + L LCK + E ++ L + Y +++ T G L E +
Sbjct: 269 QPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHS 328
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+ M R G+ PD +N + A ++ ++ A ++D+M S + Y LI
Sbjct: 329 FLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALC 388
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
++G ++ A+ F+ M+ +GV PD ++SL+ GLC + A ++F + ++ + L +
Sbjct: 389 KLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAA 448
Query: 542 ILSTFMISLCR 552
+ M +LCR
Sbjct: 449 FFNILMCNLCR 459
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 165/429 (38%), Gaps = 84/429 (19%)
Query: 170 IDNALKMFDEMSHRG-----------------------------------------VEFS 188
+D+ALK+FDEM V S
Sbjct: 32 LDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPS 91
Query: 189 TIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKV 248
+ + + I FC +L + + K S+ N +VI ++ G C KRV+EA
Sbjct: 92 SCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSL-NNTVIFGQLLKGLCDAKRVDEA--- 147
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
+++L++ + G Y + GL
Sbjct: 148 -------------------------------TDILLRRMPEFGCTLNVISYNILLKGLCN 176
Query: 309 ERRICEAKELGEVIV---SGKFTIDDDVLNALIGSVSS---IDPRSAIVFFNFMIEKGRV 362
E+R EA EL ++ G T + +I + +D + F MI+KG
Sbjct: 177 EKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGV--FQHMIDKGVR 234
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P T + L K E+V++ + +S + D Y V++ +LC +GR EA +
Sbjct: 235 PNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNI 294
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ RKG+ P V+ Y L+ E L D M +G S + +NI+ + +++
Sbjct: 295 FDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAK 354
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
I+ A+ +F M ++ ++P Y +L++ LC+ + A FN+ +N V +
Sbjct: 355 KAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFV 414
Query: 543 LSTFMISLC 551
S+ + LC
Sbjct: 415 FSSLVYGLC 423
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/502 (19%), Positives = 208/502 (41%), Gaps = 42/502 (8%)
Query: 67 ALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
AL + + + +H+P ++Y +++ L ++ ++ V + + + ++ Y
Sbjct: 183 ALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTC 242
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
+I + ++ + E+ + I LL L +G A +FD + +G
Sbjct: 243 LIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKG 302
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
++ +G+ + + L ++ S LD + + N + I ++ + + K ++E
Sbjct: 303 IKPHVTIYGILLHGYATEGALSEMHSFLDLMVR--NGVSPDHHIFNIMFNAYAKKAMIDE 360
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A + D++R + P + Y + + +G V + + + GV P + +
Sbjct: 361 AMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVY 420
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFNFMIEKGRV 362
GL + +A++L ++ ++ N L+ ++ + R A + M+
Sbjct: 421 GLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCR-EGRVMEAQRLIDLMLRVDVR 479
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + + + L C + DE ++ V+ + D +YN ++ C + R+ +AY +
Sbjct: 480 PDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSL 539
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW------------------------ 458
+EM KGL P V YN+++ + AK+L+
Sbjct: 540 FREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCR 599
Query: 459 -------DQMFASGCSGNLK----TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+MF S CS +L+ T NI+I + G E A+ LF + G+ PD T
Sbjct: 600 NNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVET 659
Query: 508 YTSLLEGLCQETNLQAAFEVFN 529
Y + E L +E +L+ E+F+
Sbjct: 660 YRLIAENLIKEGSLEELDELFS 681
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 165/376 (43%), Gaps = 13/376 (3%)
Query: 155 EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
I N + A ID A+ +FD+M + + + +G I C KLG+V D+
Sbjct: 343 HIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALC---KLGRV----DD 395
Query: 215 VRKRENSMINGSVIAVL-----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+ N MIN V + +++G C + E+A K+ E+ + + + + I+
Sbjct: 396 AVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMC 455
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
G V E + ++ ++ V P Y + G + RI EA +L +V+VS
Sbjct: 456 NLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKP 515
Query: 330 DDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
D+ N L+ G + A F M+ KG P + T + + L + + E E+Y
Sbjct: 516 DEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELY 575
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
+ N D+ +Y ++++ LC + + EA+ + Q + K L D+ N ++ A +
Sbjct: 576 LNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKG 635
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
A L+ + A G +++TY ++ + G +E LF M E G AP++
Sbjct: 636 GRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRML 695
Query: 509 TSLLEGLCQETNLQAA 524
+L+ L ++ A
Sbjct: 696 NALVRWLLHRGDIGRA 711
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/424 (20%), Positives = 165/424 (38%), Gaps = 4/424 (0%)
Query: 114 KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEICNSLLAVLASDGYIDN 172
K+ S Y +I + + F+ F + K I LL L +D
Sbjct: 87 KVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDE 146
Query: 173 ALK-MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR-ENSMINGSVIAV 230
A + M G + I + + + C + + L ++ + + S V
Sbjct: 147 ATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYT 206
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I G CK + V+ A V + + +P+ Y + + G E +L++
Sbjct: 207 TVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTH 266
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
G+ P Y + L R EA+ + + ++ + L+ ++ S +
Sbjct: 267 GLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEM 326
Query: 351 -VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F + M+ G P + + K+ DE + ++ + + +Y ++
Sbjct: 327 HSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDA 386
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC GR+ +A +M +G+ PD+ ++SL+ C D A+KL+ ++ G N
Sbjct: 387 LCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLN 446
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+NIL+ G + A RL ML V PD +Y +L++G C + A ++ +
Sbjct: 447 AAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLD 506
Query: 530 KSVN 533
V+
Sbjct: 507 VMVS 510
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 170/401 (42%), Gaps = 22/401 (5%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLK--QVKVNKITLDSSVYRF 124
A+ F+ QQ + ++Y +++ +L +++ D+VLK Q+ +T D V+
Sbjct: 361 AMHIFDKMRQQW-LSPGVVNYGALIDALCKLGRVD--DAVLKFNQMINEGVTPDIFVFSS 417
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
++ L +KA +F EV + N L+ L +G + A ++ D M
Sbjct: 418 LVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVD 477
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLD---EVRKRENSMINGSVIAVLIIHGFCKGKR 241
V I + + C ++ + +LD + + + + ++HG+CK +R
Sbjct: 478 VRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNT-----LLHGYCKARR 532
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE-REVVLK---KKRKLGVAPRTN 297
+++A+ + E+ ++ P + Y + +G E +E+ L +RK +
Sbjct: 533 IDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYT--- 589
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFM 356
Y + GL + EA ++ + + S +D +N +IG++ A+ F +
Sbjct: 590 -YTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATI 648
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
G VP + T +++NL K +EL E++ + N + N +V +L G +
Sbjct: 649 SAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDI 708
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
A + ++ K + S + L+ R + + AK L
Sbjct: 709 GRAGVYLSKLDEKNFSLEASTTSMLISIYSRAEYQQLAKSL 749
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%), Gaps = 3/204 (1%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN---DYFTDMESYNVMVSFLCT 412
M E G + + + L K LC +++E +E+ +++ + + ++ +Y ++ LC
Sbjct: 155 MPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCK 214
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
+ + A GV Q M KG+ P+ Y L+ + ++ +M G +
Sbjct: 215 AQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVI 274
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
Y +L+ + G A +F +++ KG+ P T Y LL G E L + V
Sbjct: 275 YAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMV 334
Query: 533 NHDVMLARSILSTFMISLCRRVLI 556
+ V I + + ++ +I
Sbjct: 335 RNGVSPDHHIFNIMFNAYAKKAMI 358
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 157/389 (40%), Gaps = 73/389 (18%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L G I A+++F EM +G + + + I C++A+L +S++DE++ R S
Sbjct: 101 LCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPT 160
Query: 224 NGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
V +IHGFC RV+ A +LDE+ R
Sbjct: 161 --VVTYTTLIHGFCTAGRVDAAMDILDEMEHR---------------------------- 190
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS 343
G+ P T Y I GL C+ E+
Sbjct: 191 -------GITPNTVTYTALIQGL------CDCGEV------------------------- 212
Query: 344 IDPRSAIVFFNFMIEKGR--VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
AI+ M +G P + T + L LC++ + +E + + F +
Sbjct: 213 ---ERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y ++ LC G EA ++ EM G + DV YNSL++ C+ L A+++ M
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILM 329
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G + ++ TY LI + G ++ AL L M KG+ P++ TYT+L+ G Q
Sbjct: 330 VEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRT 389
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISL 550
A ++ N+ ++ +M A I SL
Sbjct: 390 DHALQLVNEMKSNGLMPAGDIYKILFKSL 418
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 145/362 (40%), Gaps = 38/362 (10%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+SY + L QI + ++++ DS Y +I L + + S+ +E
Sbjct: 92 ISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDE 151
Query: 145 VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ P + +L+ + G +D A+ + DEM HRG+ +T+ + I C+
Sbjct: 152 MQ--ARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
++ + + +L E++ R N V +IHG C+ E + LDE+ I C P+
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + GS E V+L + +G Y I GL ++GE+
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLC---------KMGELD 320
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+ + I M+EKG P + T ++L + LC D
Sbjct: 321 FAREMQI-------------------------LMVEKGVAPDVFTYTSLIQGLCDAGLLD 355
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLM 442
E + + + + A + +Y +++ + R A ++ EMK GL P Y L
Sbjct: 356 EALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILF 415
Query: 443 EA 444
++
Sbjct: 416 KS 417
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 2/142 (1%)
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE 448
K+L++ D TD+ SY+ ++ LC G++ EA + +EM+ KG PD YN L+ C++
Sbjct: 82 KLLNSQD--TDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKD 139
Query: 449 DLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
L L D+M A G S + TY LI F G ++ A+ + M +G+ P+ TY
Sbjct: 140 AQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTY 199
Query: 509 TSLLEGLCQETNLQAAFEVFNK 530
T+L++GLC ++ A V +
Sbjct: 200 TALIQGLCDCGEVERAILVLKE 221
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 2/182 (1%)
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
LCK+ + E +E+++ + D +YN++++ LC +L ++ EM+ +G P
Sbjct: 100 GLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSP 159
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
V Y +L+ C + A + D+M G + N TY LI + GE+E A+ +
Sbjct: 160 TVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVL 219
Query: 494 HNMLEKG--VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
M +G P+ TYT L+ GLCQ+ + E ++ + + + + LC
Sbjct: 220 KEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLC 279
Query: 552 RR 553
++
Sbjct: 280 QK 281
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 2/206 (0%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F M EKG P T + L LCK + + V + + A + + +Y ++
Sbjct: 110 AMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIH 169
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG--C 466
CT+GR+ A ++ EM+ +G+ P+ Y +L++ C + A + +M G C
Sbjct: 170 GFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNEC 229
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
N+ TY LI + G E + M+ G P+ TYT+L+ GLCQ+ + A
Sbjct: 230 CPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAV 289
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+ N+ V L I ++ + LC+
Sbjct: 290 LLNEMVAIGCELDVVIYNSLIDGLCK 315
>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 107/480 (22%), Positives = 210/480 (43%), Gaps = 13/480 (2%)
Query: 61 LTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS 120
LT L F Q+P+ + + + K+ + + I ++ ++ + I D+S
Sbjct: 78 LTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIG----SGIIPDAS 133
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
Y F++ SL + N A + ++++ NSL+ L G + +L++ D +
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRL 193
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV--RKRENSMINGSVIAVLIIHGFCK 238
+G+ + + + + + +LDE+ + E ++++ +V+ + G CK
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVL----LTGLCK 249
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
R E+A ++ EL + P+ ++Y I+ G E V+L + +P T
Sbjct: 250 EGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVT 309
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV-FFNFMI 357
Y I L + R A E+ E ++ +F N +I + +V + M+
Sbjct: 310 YNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMM 369
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+ P T + ++ LC+ E + + L + + E Y ++++ LC G
Sbjct: 370 YRHCNPNEGTYNAIA-TLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTY 428
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
A+ ++ EM + G PD Y+SL+ C E +L A +++ M + + + YN LI
Sbjct: 429 PAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPDTENYNSLI 487
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ + AL +F M+ KG P+ TTYT L+EG+ E + A +V + DV+
Sbjct: 488 LGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRELQLRDVI 547
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/459 (22%), Positives = 189/459 (41%), Gaps = 23/459 (5%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA- 138
F+H P L+ LSL++ + K + +IT+ F +P+ GK QK+
Sbjct: 26 FSHIP-----NLQKLSLNKGFS------KVLASTQITISPKDTIFTLPNWKTGKVEQKSK 74
Query: 139 ----FSVFNEVKFNCED-IGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
F ++F E P++ LL L + A+K+ + M G+
Sbjct: 75 ELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASS 134
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ + C +G + ++D++ E +V ++ G C + ++ ++LD
Sbjct: 135 YTFLVSSLCRKGNVGYAMQLVDKME--EYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDR 192
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
L + P+ Y + E E +L + G P Y + GL E R
Sbjct: 193 LIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGR 252
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSN 370
+A L + S F+ + N L+ S+ + A V M R P+ T +
Sbjct: 253 TEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNI 312
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L +L +++ +EV + + + SYN +++ LC G+L + +M +
Sbjct: 313 LIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRH 372
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+P+ YN++ C E +++ A + + S + Y I+I+ G A
Sbjct: 373 CNPNEGTYNAIA-TLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAF 431
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+L + M + G PD+ TY+SL+ GLC E L A E+F+
Sbjct: 432 QLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFS 470
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%)
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
RL +A+ ++ M KG PDV L+ C+ +R A K+ + M SG + +Y
Sbjct: 77 RLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYT 136
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
L+S G + A++L M E G + TY SL+ GLC NL + ++ ++
Sbjct: 137 FLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDR 192
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 104/513 (20%), Positives = 213/513 (41%), Gaps = 58/513 (11%)
Query: 55 VINPYLLTHHSLALGFFNWAS-----------QQPNFTHSPLSYHSILKSLSLSRQINAI 103
V +P ++T++++ GFF Q F ++++SI+ +L +R ++
Sbjct: 111 VCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNA 170
Query: 104 DSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT----QKAFSVFNEVKFNCEDIGPEIC-- 157
+ +L+Q+ N + + Y S+I G +T ++A +F E+ + P+I
Sbjct: 171 ELLLRQMVDNGVPPNKVTY----TSMIHGYSTLGRWEEATKMFREM--TGRGLIPDIVSW 224
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
NS + L G A ++F M+ +G + + +G+ + + ++S + ++
Sbjct: 225 NSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKG 284
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ ++ ++ ++I + K ++EA +L E++ + PD Y + MG +
Sbjct: 285 --DGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRL 342
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ + GV P T Y I G + +AKEL +++N
Sbjct: 343 ADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVY-----------EMMNNG 391
Query: 338 IGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
I PR I FFN ++ ++CK + + ++ ++
Sbjct: 392 I-------PRPNIAFFNSIVH---------------SICKEGRVMDAHHIFDLVKDIGER 429
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
+D+ +N ++ C G + +A+ V+ M G+ PD YN+L+ + + L
Sbjct: 430 SDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNL 489
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ +M TYNI++ G A ++ H M+ G TY +L+GLC+
Sbjct: 490 FREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCR 549
Query: 518 ETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
A +F K +V + L+T + S+
Sbjct: 550 NNCTDEAIVMFQKLCTMNVKFNITTLNTMINSM 582
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 163/376 (43%), Gaps = 5/376 (1%)
Query: 158 NSLLAVLASDGYIDNALK-MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
N++L L D+A+K + M+ G + + + + C++ + Q L +L +
Sbjct: 47 NTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMA 106
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
K E V +IHGF K ++ +A + E+ + PD + + + +
Sbjct: 107 KEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARA 166
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV-LN 335
V E++L++ GV P Y I G R EA ++ + +G+ I D V N
Sbjct: 167 VDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREM-TGRGLIPDIVSWN 225
Query: 336 ALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+ + S+ + A F M KG P + T L +++ + + +
Sbjct: 226 SFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGD 285
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ + +++ G + EA ++ EM+ +GL PDV Y++L+ A CR L A
Sbjct: 286 GIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADA 345
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA-PDATTYTSLLE 513
++QM +G N Y+ LI F G++ A L + M+ G+ P+ + S++
Sbjct: 346 VDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVH 405
Query: 514 GLCQETNLQAAFEVFN 529
+C+E + A +F+
Sbjct: 406 SICKEGRVMDAHHIFD 421
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 192/427 (44%), Gaps = 22/427 (5%)
Query: 70 FFNWASQ--QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
F++ A++ +PN ++Y +L + + S +K + I + V+ +I
Sbjct: 244 FYSMAAKGHRPNI----VTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILID 299
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGV 185
+ + +A + +E++ + + P++ ++L++ L G + +A+ F++M GV
Sbjct: 300 AYAKRGMMDEAMLILSEMQG--QGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGV 357
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL--IIHGFCKGKRVE 243
+ +T+ + I FC + L + ++ E+ N+ I IA I+H CK RV
Sbjct: 358 QPNTVVYHSLIQGFCTHGDLVKAKELVYEMM---NNGIPRPNIAFFNSIVHSICKEGRVM 414
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
+A + D ++ + D I + + + + L+G + + VL G+ P T Y +
Sbjct: 415 DAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLV 474
Query: 304 LGLIVERRICEA----KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
G RI + +E+ + + + +L+ L + ++ +A + MI
Sbjct: 475 NGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTV---AAQKMLHEMIGC 531
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G +L T + + K LC+ N +DE + +++ L + ++ + N M++ + T R EA
Sbjct: 532 GTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEA 591
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ + GL P+ S Y ++ +E + A ++ M SGC+ + N I
Sbjct: 592 KDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRT 651
Query: 480 FSEVGEI 486
E GEI
Sbjct: 652 LLEKGEI 658
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR- 491
P + Y +M CCR + ++ +G + N ++ + A++
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
L M E G PDA +Y +L+ LC + Q A ++
Sbjct: 66 LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLL 102
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 191/464 (41%), Gaps = 82/464 (17%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINA---IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
+ S L+Y+++L +LS + +A DS+L + + + Y ++ +L +
Sbjct: 151 GYVPSVLAYNAVLLALSDASLTSARRFFDSMLS----DGVAPNVYTYNILVRALCGRGHR 206
Query: 136 QKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
++A S+ +++ GP + N+L+A G +D A ++ M G++ + + F
Sbjct: 207 KEALSILRDMRG--AGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTF- 263
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
NSM+NG CK ++E+A KV DE+
Sbjct: 264 --------------------------NSMVNG----------MCKAGKMEDARKVFDEMV 287
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
PD ++Y + + G E V + + G+ P + I +C
Sbjct: 288 REGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLI------HVMC 341
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+A L A+ M E+G T + L
Sbjct: 342 KAGNL----------------------------ERAVTLVRQMRERGLQMNEVTFTALID 373
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
CK+ D+ + + + + YN +++ C GR+ EA ++ EM+ KGL P
Sbjct: 374 GFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKP 433
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
DV Y++++ A C+ A +L QM G + TY+ LI + A LF
Sbjct: 434 DVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLF 493
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
NM++ G+ PD TYTSL++G C+E N+++A + +K V V+
Sbjct: 494 KNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVL 537
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/488 (21%), Positives = 202/488 (41%), Gaps = 67/488 (13%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
+G +PN ++++S++ + + ++ V ++ + D Y ++
Sbjct: 248 VGMMREGGLKPNL----VTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVG 303
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGV 185
+ + +A SVF E+ + I P++ SL+ V+ G ++ A+ + +M RG+
Sbjct: 304 GYCKAGCSHEALSVFAEMTQ--KGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGL 361
Query: 186 EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEE 244
+ + + F I FC+ L L VR + I SV+ +I+G+C R++E
Sbjct: 362 QMNEVTFTALIDGFCKKGFLDDALL---AVRGMKQCRIKPSVVCYNALINGYCMVGRMDE 418
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKL---MGSVFEREVVLKKKRKLGVAPRTNDYRE 301
A ++L E+ + KPD + Y + + S FE + +K GV P Y
Sbjct: 419 ARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEK---GVLPDAITYSS 475
Query: 302 FILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGR 361
I L E+R+ +A V F MI+ G
Sbjct: 476 LIRVLCGEKRLSDAH----------------------------------VLFKNMIKLGL 501
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P T ++L CK + + ++ + D+ +Y+V+++ L S R EA
Sbjct: 502 QPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQ 561
Query: 422 VIQEMKRKGLDPDVSFYNSLMEAC---------------CREDLLRPAKKLWDQMFASGC 466
++ ++ + P + Y++LM C C + L+ A K++ M
Sbjct: 562 LLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNW 621
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ + Y++LI G + AL ML+ G AP++T+ SL+ GL + + A +
Sbjct: 622 NLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQ 681
Query: 527 VFNKSVNH 534
V + +N+
Sbjct: 682 VIQQLLNY 689
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 110/219 (50%)
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
NA++ ++S SA FF+ M+ G P + T + L + LC R E + + + +
Sbjct: 160 NAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGA 219
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ +YN +V+ +G + A ++ M+ GL P++ +NS++ C+ + A
Sbjct: 220 GCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDA 279
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+K++D+M G + + +YN L+ + + G AL +F M +KG+ PD T+TSL+
Sbjct: 280 RKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHV 339
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+C+ NL+ A + + + + + + C++
Sbjct: 340 MCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKK 378
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 155/322 (48%), Gaps = 10/322 (3%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-L 231
A +F +M G + + + I C++ ++ + L + ++ + I+ ++
Sbjct: 29 AAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKG---ISPNIFTYNS 85
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I G C R EA +L+E+ P+ + + ++ F G+VFE VLK ++G
Sbjct: 86 LIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMG 145
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAI 350
V P Y + G ++ + EA++L +V+++ D N LI G + A
Sbjct: 146 VEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAK 205
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
FN MI +G P + + + L LC+ + E +++K + N D+ +Y++++
Sbjct: 206 QLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGF 265
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C G L +A+ + + M+ L P++ YN L++A C+ L+ A+KL+ ++F G N+
Sbjct: 266 CKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNM 325
Query: 471 KTYNILISKFSEVGEIEGALRL 492
K + K E+ + ALR+
Sbjct: 326 KHW-----KLFEIWKRMAALRM 342
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 136/299 (45%), Gaps = 34/299 (11%)
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
R +PD Y + +G + KK + G P Y I L +RR+ E
Sbjct: 4 RGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNE 63
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
A ++ F++M KG P + T ++L +
Sbjct: 64 ALDI----------------------------------FSYMKAKGISPNIFTYNSLIQG 89
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LC ++ E + + + + ++ +++++++ C G + EA GV++ M G++P+
Sbjct: 90 LCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPN 149
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V Y+SLM + + A+KL+D M GC ++ +YNILI+ + + I A +LF+
Sbjct: 150 VVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFN 209
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
M+ +G+ PD +Y +L++GLCQ L+ A ++F + + + S + C++
Sbjct: 210 EMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQ 268
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 139/304 (45%), Gaps = 9/304 (2%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
II+G CK A + ++ C+PD + Y + + V E + + G
Sbjct: 16 IINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKG 75
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
++P Y I GL R EA + ++S + + LI +I + V
Sbjct: 76 ISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLI----NIFCKEGNV 131
Query: 352 F-----FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
F M E G P + T S+L + + E +++ V+ D+ SYN++
Sbjct: 132 FEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNIL 191
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
++ C + R+ EA + EM +GL PD+ YN+L++ C+ LR A L+ M +G
Sbjct: 192 INGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGN 251
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+L TY+IL+ F + G + A RLF M + P+ Y L++ +C+ NL+ A +
Sbjct: 252 LPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARK 311
Query: 527 VFNK 530
+F++
Sbjct: 312 LFSE 315
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 6/186 (3%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M+ +G P + T + + LCK ++ ++K + D+ +Y+ ++ LC R
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ EA + MK KG+ P++ YNSL++ C R A + ++M + N+ T+++
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI+ F + G + A + M E GV P+ TY+SL+ G +LQA EVF D
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGY----SLQA--EVFEARKLFD 174
Query: 536 VMLARS 541
VM+ +
Sbjct: 175 VMITKG 180
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 56/288 (19%), Positives = 114/288 (39%), Gaps = 42/288 (14%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
A QP+ ++Y +I+ SL R++N + +K I+ + Y +I L
Sbjct: 39 AGCQPDV----VTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFS 94
Query: 134 NTQKAFSVFNE----------VKFN------CED-----------------IGPEIC--N 158
++A ++ NE V F+ C++ + P + +
Sbjct: 95 RWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYS 154
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
SL+ + + A K+FD M +G + + + I +C+ ++G+ + +E+ +
Sbjct: 155 SLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQ 214
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+ V +I G C+ R+ EA + + PD Y I+ + F G +
Sbjct: 215 --GLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLA 272
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL-GEVIVSG 325
+ + + + + P Y I + R + EA++L E+ V G
Sbjct: 273 KAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQG 320
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 139/562 (24%), Positives = 238/562 (42%), Gaps = 75/562 (13%)
Query: 33 LLEQTLHQLGLRDSLSPSLVARVI-----NPYLLTHHSLALGFFNWASQQPNFTHSPLSY 87
+L+ L SL + +RV+ +P L T L FF++ Q P+ L
Sbjct: 14 ILKSGLQPFKTTPSLLSNFDSRVMQLVLSDPNLPTRSCLR--FFDFLRQNPS-RKPDLPA 70
Query: 88 HSILKS-LSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
H IL S L +R+ + +VLK + VN L S+V R + S I G+
Sbjct: 71 HLILFSRLYRARKFAEMKNVLKFI-VNDGNLWSNVERIV--SSIGGE------------- 114
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
FN I + C+ L V + D++L++FD +G E F+ + +
Sbjct: 115 FNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNME 174
Query: 207 QVLSMLDEVRKRENSMINGSVIA-VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ L R+ +S I V + ++ G CK V A ++DEL + KP I Y
Sbjct: 175 LCVEFL---RQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYN 231
Query: 266 IVAE---EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
+ E K +G V E +L K V Y I +I EA++L + +
Sbjct: 232 TLLNGYIEIKDVGGVNE---ILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEM 288
Query: 323 VSGKFTIDDDVLNALIG-SVSSIDPRSAIVFFNFMIEKGRVPTLST-------------- 367
+ D + ++I + + + A V F+ M E+ VP T
Sbjct: 289 LKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEM 348
Query: 368 ---------------------LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+ L CK+ DE + + ++ + D + N++
Sbjct: 349 KAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNII 408
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
S C S R EA ++ M+ +G+ P+V ++ L++ C+E A++L+ M G
Sbjct: 409 ASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGK 468
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ ++ TYN I ++ + G++E A +L + M E+G+ PD TYTSL++G N+ A E
Sbjct: 469 APSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALE 528
Query: 527 VFNK----SVNHDVMLARSILS 544
+FN+ +N +V+ I+S
Sbjct: 529 LFNEMPQLGLNRNVVTYTVIIS 550
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 203/468 (43%), Gaps = 18/468 (3%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
+L F++A ++ F S L +L S + L+Q+ + I + + ++
Sbjct: 141 SLEVFDYARKK-GFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVV 199
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYID-----NALKMFDE 179
L + +A ++ +E+ C+ P + N+LL +GYI+ ++
Sbjct: 200 DGLCKKGEVVRAKALMDELV--CKGFKPSVITYNTLL-----NGYIEIKDVGGVNEILSL 252
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M V+++ + + I + ++K+ + + DE+ K+ + I II+ CK
Sbjct: 253 MEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKK--GIEPDVYIYTSIINWNCKF 310
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
++ AF + DE+ R P+ Y + G + E+++ + GV +
Sbjct: 311 GNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIF 370
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIE 358
+ G + I EA L ++ F ID N + + R A M E
Sbjct: 371 NTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEE 430
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
+G P + + S L CK E ++KV+ + +YN + C G++ E
Sbjct: 431 RGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEE 490
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
AY +I EM+ +GL PD Y SL++ + A +L+++M G + N+ TY ++IS
Sbjct: 491 AYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIIS 550
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
S+ G + A +L+ M ++G+ PD Y+SL+ L + L + E
Sbjct: 551 GLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLE 598
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 98/207 (47%)
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ F M++ G + + + + LCK+ + + L + + +YN +++
Sbjct: 177 VEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNG 236
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
+ ++ M++ +D +V+ Y L+E R + A+KL+D+M G +
Sbjct: 237 YIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPD 296
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ Y +I+ + G ++ A LF M E+ + P+A TY +L+ G C+ ++AA + N
Sbjct: 297 VYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVN 356
Query: 530 KSVNHDVMLARSILSTFMISLCRRVLI 556
+ V + R I +T M C++ +I
Sbjct: 357 DMQSKGVDVNRVIFNTLMDGYCKKGMI 383
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 161/388 (41%), Gaps = 24/388 (6%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWAS-----------QQPNFTHSPLSYHSILKSL 94
+L LV + P ++T+++L G+ ++ ++ +Y +++
Sbjct: 213 ALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWY 272
Query: 95 SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGP 154
S S +I + + ++ I D +Y II + N ++AF +F+E+
Sbjct: 273 SRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNA 332
Query: 155 EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
+L+ G + A M ++M +GV+ + + F + +C+ M+DE
Sbjct: 333 YTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKG-------MIDE 385
Query: 215 VRKRENSMIN-----GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+ +N M + +I GFC+ R EEA ++L + R P+ +++ I+ +
Sbjct: 386 ALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILID 445
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
+ + E + K K G AP Y FI + ++ EA +L +
Sbjct: 446 IYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMP 505
Query: 330 DDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
D +LI G +S + A+ FN M + G + T + + L K ++DE ++Y
Sbjct: 506 DTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLY 565
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRL 416
++ D Y+ +++ L G L
Sbjct: 566 DEMNKEGIVPDDGIYSSLIASLHKVGPL 593
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 137/301 (45%), Gaps = 1/301 (0%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
L+I GF + VE A+ + +E++ C PD Y + + G + E + +
Sbjct: 795 LLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTR 854
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G P T Y I L+ R+ +A +L +VSG F+ LI G + S A
Sbjct: 855 GCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDA 914
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F+ M+ G P + + L K D E +K + D++SY ++V
Sbjct: 915 HEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDI 974
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC +GR+ +A +++K+ GLDPD+ YN ++ R A L+ +M G +
Sbjct: 975 LCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPD 1034
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
L TYN LI VG IE A +++ + G+ P+ TY +L+ G N + A+ ++
Sbjct: 1035 LYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYK 1094
Query: 530 K 530
K
Sbjct: 1095 K 1095
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 172/390 (44%), Gaps = 7/390 (1%)
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
VL DG ID A ++ M G + + V I C KL + + + + +S
Sbjct: 273 VLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLF--TKMKSSSH 330
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
V V ++ F +++ K+ E+ PD + + I+ G + E
Sbjct: 331 KPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFD 390
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG-SV 341
+L RK GV P + Y I GL+ R+ +A +L + S LI
Sbjct: 391 LLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHG 450
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
S P A+ F M +G P + + +L + + E ++ L ++ D
Sbjct: 451 KSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSV 510
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN+M+ G++ EA ++ EM + +PDV NSL++ + + A +++ +M
Sbjct: 511 TYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRM 570
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ + TYNIL++ + G+I+ A++LF +M G +P+ T+ +LL+ LC+ +
Sbjct: 571 EEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEV 630
Query: 522 QAAFEVFNK----SVNHDVMLARSILSTFM 547
A ++F K + DV+ +I+ F+
Sbjct: 631 DLALKMFYKMTTMNCRPDVLTFNTIIHGFI 660
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 200/471 (42%), Gaps = 9/471 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y I KSL + + S L++++ L++ Y +I L+Q ++A V+
Sbjct: 161 TYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYR-- 218
Query: 146 KFNCEDIGPEICNSLLAVLASDGY---IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ E + P + + A++ + G I + + +EM G+ + + + I +
Sbjct: 219 RMVSEGLKPSL-KTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRD 277
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
K+ + ++ R ++ V ++I C +++++A + +++ KPD +
Sbjct: 278 GKIDEAYRIMK--RMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKV 335
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + ++F G + + E + + G AP + + L RI EA +L + +
Sbjct: 336 TYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTM 395
Query: 323 VSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
+ N LI G + + A+ F+ M G PT T L K
Sbjct: 396 RKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHP 455
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+ +E ++ + A ++ + N + L GRL EA + E+K GL PD YN +
Sbjct: 456 GKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMM 515
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
M+ + + A KL +M C ++ N LI + G +E A ++F M E +
Sbjct: 516 MKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNL 575
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
AP TY LL GL +E +Q A ++F H +T + LC+
Sbjct: 576 APTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCK 626
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/443 (20%), Positives = 196/443 (44%), Gaps = 4/443 (0%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++ L +I+ ++K++ + D Y +I +L + A +F ++
Sbjct: 266 TYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKM 325
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
K + +LL + G++D K++ EM G + F + + C+ ++
Sbjct: 326 KSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRI 385
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ +LD +RK + + N LI G + R+++A + + +P Y
Sbjct: 386 NEAFDLLDTMRK-QGVLPNLHTYNTLI-SGLLRANRLDDALDLFSNMESLGVEPTAYTYI 443
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
++ + G + +K + G+AP + L R+ EAK + + S
Sbjct: 444 LLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSS 503
Query: 326 KFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
D N ++ S + AI + M + P + +++L L K + +E
Sbjct: 504 GLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEA 563
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
+++ + + + +YN++++ L G++++A + + M G P+ +N+L++
Sbjct: 564 WQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDC 623
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C+ D + A K++ +M C ++ T+N +I F + +I+ A+ LFH M +K + PD
Sbjct: 624 LCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-KKLLRPD 682
Query: 505 ATTYTSLLEGLCQETNLQAAFEV 527
T +LL G+ + ++ AF +
Sbjct: 683 HVTLCTLLPGVIKSGQIEDAFRI 705
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/525 (20%), Positives = 215/525 (40%), Gaps = 74/525 (14%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+ ++K S Q++ +L ++ + D V +I +L + ++A+ +F
Sbjct: 510 VTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMF-- 567
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ ++ P + N LLA L +G I A+++F+ M+ G +TI F + C+N
Sbjct: 568 CRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKN 627
Query: 203 AKLGQVLSMLDEVRKRE--------NSMINGSVI------AVLIIH-------------- 234
++ L M ++ N++I+G + A+ + H
Sbjct: 628 DEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPDHVTLC 687
Query: 235 ----GFCKGKRVEEAFKVLDELRIRE---------------------------------- 256
G K ++E+AF++ ++ +
Sbjct: 688 TLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVC 747
Query: 257 ---CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
CK D + I+ K + R V +K ++LGV P Y I G + +
Sbjct: 748 RAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVE 807
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV-FFNFMIEKGRVPTLSTLSNLS 372
A L E + S D N+LI + + + ++ M+ +G P T + +
Sbjct: 808 VAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVI 867
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
NL K N+ D+ +++Y L + D+ ++ ++ L SGRL +A+ + M G
Sbjct: 868 SNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCR 927
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P+ + YN L+ + + A + + +M G +LK+Y IL+ G ++ AL
Sbjct: 928 PNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHY 987
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
F + + G+ PD Y ++ GL + + A +F++ N ++
Sbjct: 988 FEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIV 1032
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 177/404 (43%), Gaps = 49/404 (12%)
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCE-DIGP--EICNSLLAVLASDGYID 171
I D SV II L + K T A +VF VKF E + P ++ N L+ ++
Sbjct: 750 ICKDDSVLIPIIKVLCKHKKTSVARNVF--VKFTKELGVKPTLKVYNLLIDGFLEVHNVE 807
Query: 172 NALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL 231
A +F+EM G T + NS+I+
Sbjct: 808 VAWNLFEEMKSAGCAPDTFTY---------------------------NSLIDA------ 834
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
HG K ++ E F + DE+ R CKP+ I Y +V + + ++ + L G
Sbjct: 835 --HG--KSGKINELFDLYDEMLTRGCKPNTITYNMVISNL-VKSNRLDKAMDLYYNLVSG 889
Query: 292 -VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---GSVSSIDPR 347
+P + I GL+ R+ +A E+ + +V + + N L+ G + +D
Sbjct: 890 DFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVD-- 947
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
+A FF M+++G P L + + L LC + D+ + ++ L D+ +YN+M+
Sbjct: 948 TACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMI 1007
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+ L S R EA + EM+ +G+ PD+ YNSL+ ++ A K+++++ G
Sbjct: 1008 NGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLK 1067
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
N+ TYN LI ++ G E A ++ M+ G P+ T+ L
Sbjct: 1068 PNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 120/291 (41%), Gaps = 9/291 (3%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y+S++ + S +IN + + ++ ++ Y +I +L++ KA ++
Sbjct: 826 FTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYN 885
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ D P C L+ L G +D+A +MFD M H G ++ + + + +
Sbjct: 886 LVSG--DFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGY--- 940
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
KLG V + + ++ I + + +++ C RV++A ++L+ PD
Sbjct: 941 GKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDL 1000
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+AY ++ E + + + G+ P Y IL L + I EA ++ E
Sbjct: 1001 VAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEE 1060
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
+ + NALI G S + A + M+ G P T + L
Sbjct: 1061 LQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 104/215 (48%), Gaps = 7/215 (3%)
Query: 320 EVIVSGK---FTIDDDVLNALIGSVSSIDPRSAIVFFNFMIE-KGRVPTLSTLSNLSKNL 375
E++V+GK + D+VL L S+S DP A+ +F + E V T T +++ + L
Sbjct: 78 ELVVNGKPRKGSSSDEVLGVL-HSIS--DPIHALFYFKSVGELPNVVHTTETCNHMLEIL 134
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
+ +++ V+ ++ ++++Y ++ L G LR+A +++M+ G +
Sbjct: 135 RVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNA 194
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YN L+ + + A +++ +M + G +LKT++ L+ + I+ + L
Sbjct: 195 YSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEE 254
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
M G+ P+ TYT + L ++ + A+ + +
Sbjct: 255 MESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKR 289
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 139/562 (24%), Positives = 238/562 (42%), Gaps = 75/562 (13%)
Query: 33 LLEQTLHQLGLRDSLSPSLVARVI-----NPYLLTHHSLALGFFNWASQQPNFTHSPLSY 87
+L+ L SL + +RV+ +P L T L FF++ Q P+ L
Sbjct: 10 ILKSGLQPFKTTPSLLSNFDSRVMQLVLSDPNLPTRSCLR--FFDFLRQNPS-RKPDLPA 66
Query: 88 HSILKS-LSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
H IL S L +R+ + +VLK + VN L S+V R + S I G+
Sbjct: 67 HLILFSRLYRARKFAEMKNVLKFI-VNDGNLWSNVERIV--SSIGGE------------- 110
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
FN I + C+ L V + D++L++FD +G E F+ + +
Sbjct: 111 FNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNME 170
Query: 207 QVLSMLDEVRKRENSMINGSVIA-VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
+ L R+ +S I V + ++ G CK V A ++DEL + KP I Y
Sbjct: 171 LCVEFL---RQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYN 227
Query: 266 IVAE---EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
+ E K +G V E +L K V Y I +I EA++L + +
Sbjct: 228 TLLNGYIEIKDVGGVNE---ILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEM 284
Query: 323 VSGKFTIDDDVLNALIG-SVSSIDPRSAIVFFNFMIEKGRVPTLST-------------- 367
+ D + ++I + + + A V F+ M E+ VP T
Sbjct: 285 LKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEM 344
Query: 368 ---------------------LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+ L CK+ DE + + ++ + D + N++
Sbjct: 345 KAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNII 404
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
S C S R EA ++ M+ +G+ P+V ++ L++ C+E A++L+ M G
Sbjct: 405 ASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGK 464
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ ++ TYN I ++ + G++E A +L + M E+G+ PD TYTSL++G N+ A E
Sbjct: 465 APSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALE 524
Query: 527 VFNK----SVNHDVMLARSILS 544
+FN+ +N +V+ I+S
Sbjct: 525 LFNEMPQLGLNRNVVTYTVIIS 546
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 203/468 (43%), Gaps = 18/468 (3%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
+L F++A ++ F S L +L S + L+Q+ + I + + ++
Sbjct: 137 SLEVFDYARKK-GFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVV 195
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYID-----NALKMFDE 179
L + +A ++ +E+ C+ P + N+LL +GYI+ ++
Sbjct: 196 DGLCKKGEVVRAKALMDELV--CKGFKPSVITYNTLL-----NGYIEIKDVGGVNEILSL 248
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M V+++ + + I + ++K+ + + DE+ K+ + I II+ CK
Sbjct: 249 MEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKK--GIEPDVYIYTSIINWNCKF 306
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
++ AF + DE+ R P+ Y + G + E+++ + GV +
Sbjct: 307 GNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIF 366
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNFMIE 358
+ G + I EA L ++ F ID N + + R A M E
Sbjct: 367 NTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEE 426
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
+G P + + S L CK E ++KV+ + +YN + C G++ E
Sbjct: 427 RGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEE 486
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
AY +I EM+ +GL PD Y SL++ + A +L+++M G + N+ TY ++IS
Sbjct: 487 AYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIIS 546
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
S+ G + A +L+ M ++G+ PD Y+SL+ L + L + E
Sbjct: 547 GLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLE 594
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 98/207 (47%)
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ F M++ G + + + + LCK+ + + L + + +YN +++
Sbjct: 173 VEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNG 232
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
+ ++ M++ +D +V+ Y L+E R + A+KL+D+M G +
Sbjct: 233 YIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPD 292
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ Y +I+ + G ++ A LF M E+ + P+A TY +L+ G C+ ++AA + N
Sbjct: 293 VYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVN 352
Query: 530 KSVNHDVMLARSILSTFMISLCRRVLI 556
+ V + R I +T M C++ +I
Sbjct: 353 DMQSKGVDVNRVIFNTLMDGYCKKGMI 379
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 161/388 (41%), Gaps = 24/388 (6%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWAS-----------QQPNFTHSPLSYHSILKSL 94
+L LV + P ++T+++L G+ ++ ++ +Y +++
Sbjct: 209 ALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWY 268
Query: 95 SLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGP 154
S S +I + + ++ I D +Y II + N ++AF +F+E+
Sbjct: 269 SRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNA 328
Query: 155 EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDE 214
+L+ G + A M ++M +GV+ + + F + +C+ M+DE
Sbjct: 329 YTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKG-------MIDE 381
Query: 215 VRKRENSMIN-----GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+ +N M + +I GFC+ R EEA ++L + R P+ +++ I+ +
Sbjct: 382 ALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILID 441
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
+ + E + K K G AP Y FI + ++ EA +L +
Sbjct: 442 IYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMP 501
Query: 330 DDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVY 388
D +LI G +S + A+ FN M + G + T + + L K ++DE ++Y
Sbjct: 502 DTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLY 561
Query: 389 KVLSANDYFTDMESYNVMVSFLCTSGRL 416
++ D Y+ +++ L G L
Sbjct: 562 DEMNKEGIVPDDGIYSSLIASLHKVGPL 589
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/513 (22%), Positives = 219/513 (42%), Gaps = 68/513 (13%)
Query: 64 HSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVK-----VNK---- 114
+ AL +WAS+QPNF + Y IL+ L N++ +L+++K +++
Sbjct: 67 ETAALRLLSWASKQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLL 126
Query: 115 ---------------------------ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
+ LD+ +Y F++ L+ G + +V + +
Sbjct: 127 IFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMV- 185
Query: 148 NCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ I P++ N L+ L I A+ + +EMS G+ F + F E
Sbjct: 186 -SKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEG-- 242
Query: 206 GQVLSMLDEVRKRENSMING----SVIAVLIIHGFCKGKRVEEAFKVLD----------- 250
+M R +E + G +V +++HGFCK R+EEA +D
Sbjct: 243 ----NMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMA 298
Query: 251 -----ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILG 305
E++ + C+PD Y ++ + G + E +L++ G A Y I G
Sbjct: 299 IELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDG 358
Query: 306 LIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPT 364
++I EA+E+ + + + + N LI G S + A + MI +G P
Sbjct: 359 FCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPD 418
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQ 424
T +++ C+ + ++ + +++N D+ +Y ++ LC +GR+ A +++
Sbjct: 419 KFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLR 478
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV- 483
++ KG+ YN +++A + + A +L+ +M G + + TY I+ S
Sbjct: 479 SIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSG 538
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
G I A+ M+EKG P+ +++ L EGLC
Sbjct: 539 GPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLC 571
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 19/282 (6%)
Query: 289 KLGVAPRTNDYREFILGLIVE-RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP- 346
+ G+A T Y F+L ++V+ ++ + + +VS D N LI ++
Sbjct: 151 EFGLALDTLLYN-FLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQI 209
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
R AI+ M G VP T + L + + D V + + + NV+
Sbjct: 210 RPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVL 269
Query: 407 VSFLCTSGRLREAYGVI----------------QEMKRKGLDPDVSFYNSLMEACCREDL 450
V C GR+ EA I EMK KG PD YN L+++ C
Sbjct: 270 VHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGK 329
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
L+ A L +M SGC+ N+ TYN LI F + +IE A +F M +G++ ++ TY +
Sbjct: 330 LQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNT 389
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L++GLC+ +Q A ++ ++ + + + ++ + CR
Sbjct: 390 LIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCR 431
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 120/308 (38%), Gaps = 40/308 (12%)
Query: 131 QGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTI 190
+GK+T A ++NE+K N L+ L G + AL + EM G + I
Sbjct: 292 EGKHTM-AIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVI 350
Query: 191 GFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD 250
+ I FC+N K+ + + D++ + + SV +I G CK +RV+EA +++D
Sbjct: 351 TYNTLIDGFCKNKKIEEAEEIFDQMEIQ--GLSRNSVTYNTLIDGLCKSRRVQEAAQLMD 408
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
++ + KPD Y + F G + + +++ G P Y I GL
Sbjct: 409 QMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAG 468
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALI-------------------------------- 338
R+ A L I + N +I
Sbjct: 469 RVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYK 528
Query: 339 ----GSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
G +S P A+ F MIEKG +P S+ L++ LC + D L+++ ++
Sbjct: 529 IVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVDLVME 588
Query: 394 NDYFTDME 401
F+ E
Sbjct: 589 KANFSQNE 596
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 173/403 (42%), Gaps = 42/403 (10%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSH 182
++ L++ + ++ A+ +F+E+ + P + N+L+ G + A +M+D+M
Sbjct: 149 VLDGLVKARRSRCAWELFDEMLR--RGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVA 206
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRV 242
R ++ + I + I CE +G + D ++ E M +++ G C+G V
Sbjct: 207 RQIDPNVITYTSMICVLCEEGCIGDAERLFDAMK--EAGMRPNQYTYNVLMSGHCQGDDV 264
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
AF + EL P+ + + + + F E + + + + GVAP Y
Sbjct: 265 NSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVY--- 321
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGR 361
N+L+ G+ S D + A+ + M G
Sbjct: 322 --------------------------------NSLMDGAFRSGDAQEALSLYQEMTRLGL 349
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P T S + + LC + + + + + +YN ++ C +G L EA
Sbjct: 350 CPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALA 409
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
M G++P+V Y+SL++ + ++ A ++ +M A G N+ TY LI +
Sbjct: 410 TCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHA 469
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
+ G I+ A R M+E G++P+A T + L++GLC+E +Q A
Sbjct: 470 KNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDA 512
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 145/357 (40%), Gaps = 36/357 (10%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
++ G K +R A+++ DE+ R P + Y + + G+V + + + +
Sbjct: 149 VLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQ 208
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAI 350
+ P Y I L E I +A+ L + + + N L+ G D SA
Sbjct: 209 IDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAF 268
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
V + ++ G +P + L CK + E ++++ + + YN ++
Sbjct: 269 VLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGA 328
Query: 411 CTSGRLREAYGVIQEMKRKGLDPD-----------------------------------V 435
SG +EA + QEM R GL PD
Sbjct: 329 FRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNA 388
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
+ YN+L++ CR L A +M G N+ +Y+ LI S++G+++ A+ ++
Sbjct: 389 AAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTE 448
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M+ KG+ P+ TYT+L+ G + + AAF + + + + +S + LCR
Sbjct: 449 MVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCR 505
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 3/171 (1%)
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
DE + V++ L + + N ++ L + R R A+ + EM R+G+ P V YN+L
Sbjct: 128 DEALYVFRRLWT---LPALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTL 184
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ AC + + A+++WDQM A N+ TY +I E G I A RLF M E G+
Sbjct: 185 INACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGM 244
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
P+ TY L+ G CQ ++ +AF ++ + +N ++ + +T + C+
Sbjct: 245 RPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCK 295
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 97/439 (22%), Positives = 176/439 (40%), Gaps = 52/439 (11%)
Query: 117 LDSSVYRFIIPS------LIQGKNTQKAFSVFNEV--KFNCEDIGPEICN--SLLAVLAS 166
D + R ++PS LI Q A + E+ + I P + S++ VL
Sbjct: 166 FDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCE 225
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGS 226
+G I +A ++FD M G+ + + V + C+ + + E+ + +I +
Sbjct: 226 EGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLN--SGLIPNA 283
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
V+ +I GFCK KR EA + ++ P Y + + G E + ++
Sbjct: 284 VVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQE 343
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF---------TIDDDVLNAL 337
+LG+ P EF ++V R +C+ G++ V+ +F ++ NAL
Sbjct: 344 MTRLGLCPD-----EFTCSIVV-RGLCDG---GQIQVAARFLEGVREDGVNLNAAAYNAL 394
Query: 338 IGSVS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I + + A+ M E G P + + S+L K K + +Y + A
Sbjct: 395 IDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGI 454
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ +Y ++ +G + A+ +EM G+ P+ + L++ CRE+ ++ A +
Sbjct: 455 EPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVR 514
Query: 457 LWDQMFASGCS-------------------GNLKTYNILISKFSEVGEIEGALRLFHNML 497
M SG N Y LI G+ A +LF M
Sbjct: 515 F--VMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMR 572
Query: 498 EKGVAPDATTYTSLLEGLC 516
+ G+ D+ TYT L+ G C
Sbjct: 573 KSGMISDSFTYTLLIRGQC 591
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 83/167 (49%)
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
+P L + + L K +S E++ + + +YN +++ G + +A
Sbjct: 140 LPALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQE 199
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
+ +M + +DP+V Y S++ C E + A++L+D M +G N TYN+L+S
Sbjct: 200 MWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHC 259
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ ++ A L+ +L G+ P+A +T+L++G C+ A ++F
Sbjct: 260 QGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMF 306
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
V+V L G L EA V +R P + N++++ + R A +L+D+M
Sbjct: 115 GVLVIALSQMGLLDEALYVF---RRLWTLPALPACNAVLDGLVKARRSRCAWELFDEMLR 171
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
G ++ TYN LI+ G + A ++ M+ + + P+ TYTS++ LC+E +
Sbjct: 172 RGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGD 231
Query: 524 AFEVFN 529
A +F+
Sbjct: 232 AERLFD 237
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 193/438 (44%), Gaps = 9/438 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEICNSLLAVLASDGYIDNALKM 176
+S Y +I L + ++AF + E V+ C+ L+ G D A+KM
Sbjct: 264 NSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQP-STRTYTVLIKAKCDIGMTDKAMKM 322
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
DEM+ + + + + I + C K+ + + ++ K + + G + +I+G+
Sbjct: 323 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK--HGLCPGIITFNALINGY 380
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
CK V AF++L + CKP+ Y + E + ++ ++L++ G+ P
Sbjct: 381 CKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDR 440
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNF 355
Y + G E ++ A + + S D ALI + + A
Sbjct: 441 VTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGS 500
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M++KG T + L CK K+ ++ +++ + N T ++N + L +
Sbjct: 501 MVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYK 560
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
L EA ++ +M + GL P V + L+E CR + K+ ++M +GCS N+ TY I
Sbjct: 561 LNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTI 620
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
+I+ G +E A + +M GV+P+ TY L++ + L AF++ + V +
Sbjct: 621 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 680
Query: 536 VM----LARSILSTFMIS 549
+ ++LS F++S
Sbjct: 681 CQPNSHIYSALLSGFVLS 698
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 163/372 (43%), Gaps = 11/372 (2%)
Query: 190 IGFGV-------FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRV 242
+GFG+ + C LG+ + +++ K EN N SV ++IHG C+ R+
Sbjct: 223 LGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPN-SVTYSILIHGLCEAGRL 281
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
EEAF++ E+ + C+P Y ++ + +G + +L + P + Y
Sbjct: 282 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 341
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGR 361
I L E +I EA + ++ NALI G SA + M EKG
Sbjct: 342 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM-EKGN 400
Query: 362 V-PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P + T + L + LC+ +KS + + + + N D +YN++V C G+L A+
Sbjct: 401 CKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAF 460
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+ M GL+PD + +L++ C+ L A + M G S + T+ LI
Sbjct: 461 NIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGH 520
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
++G+ + LF NM+E A T+ L+ L ++ L A + K + + ++ +
Sbjct: 521 CKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSV 580
Query: 541 SILSTFMISLCR 552
+ + CR
Sbjct: 581 VTHTILIEGHCR 592
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 13/256 (5%)
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMI 357
D R +LG++V R + + V++ + +D N ++ + ++D M
Sbjct: 104 DGRIQLLGVLVSRDLFGVAQKAVVLLIQEC---EDSENGVVKLMGALDG---------MT 151
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
E G + S L L K N VY+ + + Y +V+ LC +G ++
Sbjct: 152 ELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQ 211
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA-SGCSGNLKTYNIL 476
A ++ R G D SL+ A CR D L A +++++M C N TY+IL
Sbjct: 212 AAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSIL 271
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I E G +E A +L M+EKG P TYT L++ C A ++ ++
Sbjct: 272 IHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKAC 331
Query: 537 MLARSILSTFMISLCR 552
+ + + LCR
Sbjct: 332 VPNVHTYTILIDRLCR 347
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 104/526 (19%), Positives = 203/526 (38%), Gaps = 80/526 (15%)
Query: 43 LRDSLSPSLVA--RVINPYLLTHHSLALGFFNWAS--QQPNFTHSPLSYHSILKSLS-LS 97
L+ L P ++ +IN Y + F S ++ N + +Y+ +++ L +S
Sbjct: 362 LKHGLCPGIITFNALINGY--CKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVS 419
Query: 98 RQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE-- 155
+ A +L++V N + D Y ++ + AF++FN + N + P+
Sbjct: 420 KSYKAF-LLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM--NSAGLEPDGF 476
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE-------------- 201
+L+ L G ++ A + M +G+ + F I C+
Sbjct: 477 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 536
Query: 202 ---------------------NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
+ KL + +ML ++ K ++ V ++I G C+
Sbjct: 537 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKY--GLVPSVVTHTILIEGHCRAG 594
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+ K+L+ ++ C P+ Y I+ G V E E +L GV+P Y
Sbjct: 595 ETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYA 654
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG----SVSSIDPRSAIVFFNFM 356
+ + R+ A ++ +V + + +AL+ S ++I R+ +
Sbjct: 655 VLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARA-------L 707
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
G + S S + N C N E+ K + + YN +V LC GR+
Sbjct: 708 SSTGDLDARSLSSEENDNNCLSN------EIKKCGVPTE-----DLYNFLVVGLCKEGRI 756
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCR----EDLLRPAKKLWDQMFASGCSGNLKT 472
EA + Q+M + GL PD + +S++E C+ ++ L K + D F + +
Sbjct: 757 IEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFVP----SFAS 811
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
Y +I G ++ A +L +++ + T +E L +E
Sbjct: 812 YCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMKE 857
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 200/459 (43%), Gaps = 57/459 (12%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDE 179
+YR I ++ KA VF+E+ + NC + N + VL + D A + +
Sbjct: 11 IYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDY-NRFIGVLINHSRFDLANHYYSQ 69
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M RG S+ + FI C+ + +L ++ N + + + + F +G
Sbjct: 70 MGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETL-NCLPDIWAFNIYLHLLFVEG 128
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAE---EFKLMGSV--FEREVVLKKKRKLGVAP 294
R++ A +V +++ KPD + Y I+ + K + F R+++ K G +P
Sbjct: 129 -RIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHK-----GFSP 182
Query: 295 RTNDYREFILGLIVERRICEAKELG-EVIVSGKFTIDDDVLNALIGS---VSSIDPRSAI 350
++GL R++ A EL +V+ SG+ + V NALI ID AI
Sbjct: 183 DNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAI 242
Query: 351 -----------------VFFNFMIEK----------------GRVPTLSTLSNLSKNLCK 377
VF N+ ++ G P + + + L K +CK
Sbjct: 243 KSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICK 302
Query: 378 RNKSDELVEVYKVLSANDY---FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
N D+ Y +++ + D+ SYN ++ C G AY + +EM +KG+ PD
Sbjct: 303 GNCPDK---AYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPD 359
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V + ++A + AKKL DQM G S + Y +I + G++E A +F
Sbjct: 360 VVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFC 419
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
+M+E+G++PD ++ +L+ G C+ + + A ++ + N
Sbjct: 420 DMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQN 458
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 179/403 (44%), Gaps = 12/403 (2%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
I S +A G ID A+++FDEMS +I + FI +++ ++
Sbjct: 11 IYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQM 70
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
R S+ S I G CK K ++L ++ C PD A+ I + G
Sbjct: 71 GTRGFSL--SSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEG 128
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ V +K K G P Y I G+ ++ A + ++ F+ D+
Sbjct: 129 RIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACG 188
Query: 336 ALIGSVSSIDPRSAIVFFNFMIE---KGRVPTLSTL--SNLSKNLCKRNKSDELVEVYKV 390
A++ V D R + + +I+ GRV LSTL + L C+ + D+ +
Sbjct: 189 AIV--VGLCDGRKVDLAYELIIDVMKSGRVK-LSTLVYNALISGFCRAGRIDKAQAIKSF 245
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ N D+ +YNV +++ C L +A +++ M+R G++PDV YN L++ C+ +
Sbjct: 246 MRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNC 305
Query: 451 LRPAKKLW-DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
A L ++M+ G ++ +YN +I F ++G+ A +LF M +KG+ PD T+T
Sbjct: 306 PDKAYLLMTNKMWPKGLC-DVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFT 364
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
++ + + A ++ ++ + +T + LC+
Sbjct: 365 IFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCK 407
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/478 (20%), Positives = 209/478 (43%), Gaps = 14/478 (2%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
Q N + Y+ + L + + + Q+ +L S Y I L + KN
Sbjct: 37 QSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGFSLSSFTYSRFITGLCKVKN-- 94
Query: 137 KAFSVFNEVKFNCEDIG--PEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
F+ +E+ + E + P+I N L +L +G ID AL++F+++ G + + +
Sbjct: 95 --FTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTY 152
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK-VLDE 251
+ I C+ K + ++ + S N + A+++ G C G++V+ A++ ++D
Sbjct: 153 TIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVV--GLCDGRKVDLAYELIIDV 210
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
++ K + Y + F G + + + + R+ G P Y F+ E
Sbjct: 211 MKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELM 270
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSV--SSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
+ +AK+L +++ D N L+ + + ++ ++ N M KG +S +
Sbjct: 271 LDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVS-YN 329
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
+ K CK + ++++ + D+ ++ + + G A ++ +M
Sbjct: 330 TIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEM 389
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
GL PD FY ++++ C+ + A ++ M G S ++ ++N LI+ F + + A
Sbjct: 390 GLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEA 449
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
+ L+ M +G PD TY ++ GL +E + A V+ + ++ L R+I T +
Sbjct: 450 MHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLI 507
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 179/439 (40%), Gaps = 6/439 (1%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F+ S +Y + L + ID +L ++ D + + L A
Sbjct: 74 GFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLA 133
Query: 139 FSVFNEVKFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
VF ++ N P++ + + + D A++ + +M H+G G +
Sbjct: 134 LEVFEKIVKNGRK--PDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIV 191
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C+ K+ ++ +V K ++ V LI GFC+ R+++A + +R
Sbjct: 192 VGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALI-SGFCRAGRIDKAQAIKSFMRRNG 250
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C+PD + Y + F + + + +LK + G+ P Y + + G+ +A
Sbjct: 251 CEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAY 310
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
L + K D N +I + I D SA F M +KG P + T + K
Sbjct: 311 LLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAF 370
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
+ + ++ ++ D Y ++ LC SG++ A+ + +M +G+ PDV
Sbjct: 371 LGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDV 430
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
+N+L+ C+ + A L+++M G + TY ++I E +I A ++
Sbjct: 431 ISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQ 490
Query: 496 MLEKGVAPDATTYTSLLEG 514
M++KG D +L+ G
Sbjct: 491 MMDKGFTLDRAIAQTLIRG 509
>gi|297810935|ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319188|gb|EFH49610.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1281
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/503 (22%), Positives = 219/503 (43%), Gaps = 45/503 (8%)
Query: 47 LSPSLVARVINPYL--LTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAID 104
L+P L +V+ L LA FFNWAS+Q + + +Y+++ LS +RQ ++
Sbjct: 67 LAPELNTKVVETVLNEFKRWGLAYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLT 126
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK-----------FNC--ED 151
+++ + ++ + F I L ++A SVF+ V+ +NC E
Sbjct: 127 ALVGDILNSRCLMSPGALGFFIRCLGNAGLVEEASSVFDRVREMGLCVPNAYTYNCLLEA 186
Query: 152 IGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM 211
I +S+ V A EM G F + +C N K + LS+
Sbjct: 187 ISKSNSSSVELVEAR----------LKEMRDCGFHFDKFTLTPVLQVYCNNGKSERALSV 236
Query: 212 LDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
+E+ R ++ + +L++ FCK +V++AF++++ L R + ++ + ++ F
Sbjct: 237 FNEILSR--GWLDEHISTILVV-SFCKWGQVDKAFELIEMLEERHIRLNYKTFCVLIHGF 293
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
+ + + +K R++G+ P Y I GL + + A L I D
Sbjct: 294 VKESRIDKAFQLFEKMRRMGMNPDIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDR 353
Query: 332 DVLNALIGSVS--------------SIDPRSAIVFFNFMIEKG-RVPTLSTLSNLSKNLC 376
+L L+ S S ID +S ++ + ++E R + N +NL
Sbjct: 354 GILGKLLCSFSEESELSRITKVIIGDIDTKSVMLLYKSLLEGFIRNDLVHEAYNFIQNLM 413
Query: 377 KRNKSDELVEVYKVLSAND--YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
++SD + E+ K+L + D +S ++++ L + ++ A ++ ++ + GL P
Sbjct: 414 GNHESDGMSEIVKLLKDQNKAILPDSDSLSIVIDCLVKANKVNMAVTLLHDIVQNGLIPS 473
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+ YN+++E C+E + KL +M +G + T N + +E + GAL L
Sbjct: 474 LMMYNNIIEGMCKEGRSEESLKLLAEMKDAGVEPSQYTLNCIYGCLAERCDFAGALDLLK 533
Query: 495 NMLEKGVAPDATTYTSLLEGLCQ 517
M G P T L++ LC+
Sbjct: 534 KMRFYGFEPWIKHTTCLVKKLCE 556
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/475 (20%), Positives = 188/475 (39%), Gaps = 29/475 (6%)
Query: 99 QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC- 157
Q++ +++ ++ I L+ + +I ++ KAF +F +++ + P+I
Sbjct: 263 QVDKAFELIEMLEERHIRLNYKTFCVLIHGFVKESRIDKAFQLFEKMRR--MGMNPDIAL 320
Query: 158 -NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLS-MLDEV 215
+ L+ L ++ AL ++ E+ G+ G + F E ++L ++ ++ ++
Sbjct: 321 YDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITKVIIGDI 380
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL------------------RIREC 257
+ ++ S ++ GF + V EA+ + L + +
Sbjct: 381 DTKSVMLLYKS-----LLEGFIRNDLVHEAYNFIQNLMGNHESDGMSEIVKLLKDQNKAI 435
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKE 317
PD + IV + V +L + G+ P Y I G+ E R E+ +
Sbjct: 436 LPDSDSLSIVIDCLVKANKVNMAVTLLHDIVQNGLIPSLMMYNNIIEGMCKEGRSEESLK 495
Query: 318 LGEVIVSGKFTIDDDVLNALIGSVSS-IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
L + LN + G ++ D A+ M G P + + L K LC
Sbjct: 496 LLAEMKDAGVEPSQYTLNCIYGCLAERCDFAGALDLLKKMRFYGFEPWIKHTTCLVKKLC 555
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+ K+ + + ++ + M SY + L + + + ++ G PDV
Sbjct: 556 ENGKAVDACKYIDDVAGEGFLRHMVSYTAAIEGLIRNEGVDRGLELFRDTCANGHCPDVI 615
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
Y+ L++A C+ A L+++M + G ++ TYN +I + + GEI+ L M
Sbjct: 616 AYHVLIKALCKACRTTEADNLFNEMVSKGLKPSVATYNSMIDGWCKEGEIDRGLSCIVRM 675
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
E PD TYTSL+ GLC A +N+ D R + LC
Sbjct: 676 YEDEKNPDVITYTSLIHGLCASRRPSEAISRWNEMKGKDCYPNRITFMALIQGLC 730
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 138/344 (40%), Gaps = 29/344 (8%)
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
K+ +++L ++ +N +I ++ II G CK R EE+ K+L E++ +P
Sbjct: 454 KVNMAVTLLHDIV--QNGLIPSLMMYNNIIEGMCKEGRSEESLKLLAEMKDAGVEPSQYT 511
Query: 264 ----YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
Y +AE G++ +LKK R G P + +++CE G
Sbjct: 512 LNCIYGCLAERCDFAGAL----DLLKKMRFYGFEPWIKHTTCLV------KKLCEN---G 558
Query: 320 EVIVSGKFTID---DDVLNALIGSVSSIDP-------RSAIVFFNFMIEKGRVPTLSTLS 369
+ + + K+ D + L ++ ++I+ + F G P +
Sbjct: 559 KAVDACKYIDDVAGEGFLRHMVSYTAAIEGLIRNEGVDRGLELFRDTCANGHCPDVIAYH 618
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
L K LCK ++ E ++ + + + +YN M+ C G + I M
Sbjct: 619 VLIKALCKACRTTEADNLFNEMVSKGLKPSVATYNSMIDGWCKEGEIDRGLSCIVRMYED 678
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
+PDV Y SL+ C A W++M C N T+ LI G A
Sbjct: 679 EKNPDVITYTSLIHGLCASRRPSEAISRWNEMKGKDCYPNRITFMALIQGLCNCGWSSEA 738
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
L F M EK + PD+ Y SL+ N+ A F +F + V+
Sbjct: 739 LVYFREMEEKEMEPDSAVYLSLVSSFLSSENISAGFGIFREMVH 782
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/488 (19%), Positives = 210/488 (43%), Gaps = 26/488 (5%)
Query: 86 SYHSILKSLSLSRQ--INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
+Y+ +L+++S S + +++ LK+++ D ++ +++A SVFN
Sbjct: 179 TYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNNGKSERALSVFN 238
Query: 144 EVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
E+ + + I L+ G +D A ++ + + R + + F V I F + +
Sbjct: 239 EI-LSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERHIRLNYKTFCVLIHGFVKES 297
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD-FI 262
++ + + +++R+ M + ++I G CK K +E A + E++ PD I
Sbjct: 298 RIDKAFQLFEKMRRM--GMNPDIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGI 355
Query: 263 AYRIV---AEEFKL-------MGSVFEREVVLKKKRKLGVAPRTNDYRE---FILGLIVE 309
+++ +EE +L +G + + V+L K L R + E FI L+
Sbjct: 356 LGKLLCSFSEESELSRITKVIIGDIDTKSVMLLYKSLLEGFIRNDLVHEAYNFIQNLMGN 415
Query: 310 RRICEAKELGEVIVSGKFTI--DDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLS 366
E+ +++ I D D L+ +I V + A+ + +++ G +P+L
Sbjct: 416 HESDGMSEIVKLLKDQNKAILPDSDSLSIVIDCLVKANKVNMAVTLLHDIVQNGLIPSLM 475
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR--LREAYGVIQ 424
+N+ + +CK +S+E +++ + D + Y + + C + R A +++
Sbjct: 476 MYNNIIEGMCKEGRSEESLKL--LAEMKDAGVEPSQYTLNCIYGCLAERCDFAGALDLLK 533
Query: 425 EMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG 484
+M+ G +P + L++ C A K D + G ++ +Y I
Sbjct: 534 KMRFYGFEPWIKHTTCLVKKLCENGKAVDACKYIDDVAGEGFLRHMVSYTAAIEGLIRNE 593
Query: 485 EIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILS 544
++ L LF + G PD Y L++ LC+ A +FN+ V+ + + + +
Sbjct: 594 GVDRGLELFRDTCANGHCPDVIAYHVLIKALCKACRTTEADNLFNEMVSKGLKPSVATYN 653
Query: 545 TFMISLCR 552
+ + C+
Sbjct: 654 SMIDGWCK 661
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 166/427 (38%), Gaps = 12/427 (2%)
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
++ L + ++N ++L + N + +Y II + + ++++ + E+K
Sbjct: 445 VIDCLVKANKVNMAVTLLHDIVQNGLIPSLMMYNNIIEGMCKEGRSEESLKLLAEMKDAG 504
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ N + LA AL + +M G E + K CEN K
Sbjct: 505 VEPSQYTLNCIYGCLAERCDFAGALDLLKKMRFYGFEPWIKHTTCLVKKLCENGKAVDAC 564
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+D+V + V I G + + V+ ++ + PD IAY ++ +
Sbjct: 565 KYIDDVAGE--GFLRHMVSYTAAIEGLIRNEGVDRGLELFRDTCANGHCPDVIAYHVLIK 622
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
E + + + G+ P Y I G E I + L ++ +
Sbjct: 623 ALCKACRTTEADNLFNEMVSKGLKPSVATYNSMIDGWCKEGEI--DRGLSCIVRMYEDEK 680
Query: 330 DDDVLN--ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
+ DV+ +LI G +S P AI +N M K P T L + LC S E +
Sbjct: 681 NPDVITYTSLIHGLCASRRPSEAISRWNEMKGKDCYPNRITFMALIQGLCNCGWSSEALV 740
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
++ + + D Y +VS +S + +G+ +EM KG P N L+
Sbjct: 741 YFREMEEKEMEPDSAVYLSLVSSFLSSENISAGFGIFREMVHKGRFPVSVDRNYLLAVDA 800
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
D + A KL ++ G +N +I FS E ++R++ +L G +PD
Sbjct: 801 TSD-VNYAYKLLSKLSNPPDYG----WNFVIRGFSNSKNPEKSIRVYIQILRSGFSPDHM 855
Query: 507 TYTSLLE 513
TY LL+
Sbjct: 856 TYPFLLK 862
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 87/431 (20%), Positives = 167/431 (38%), Gaps = 51/431 (11%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFN--CEDIGPEICNSLLAVLASDGYIDNALKMFDE 179
Y I LI+ + + +F + N C D+ + L+ L A +F+E
Sbjct: 582 YTAAIEGLIRNEGVDRGLELFRDTCANGHCPDVIAY--HVLIKALCKACRTTEADNLFNE 639
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M +G++ S + I +C+ ++ + LS + VR E+ + +IHG C
Sbjct: 640 MVSKGLKPSVATYNSMIDGWCKEGEIDRGLSCI--VRMYEDEKNPDVITYTSLIHGLCAS 697
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+R EA +E++ ++C P+ I + + + G E V ++ + + P + Y
Sbjct: 698 RRPSEAISRWNEMKGKDCYPNRITFMALIQGLCNCGWSSEALVYFREMEEKEMEPDSAVY 757
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
+ + I S F I F M+ K
Sbjct: 758 LSLVSSFLSSENI-----------SAGFGI-----------------------FREMVHK 783
Query: 360 GRVPTLSTLSNLSKN-LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
GR P ++ +N L + + ++ YK+LS D +N ++ S +
Sbjct: 784 GRFPV-----SVDRNYLLAVDATSDVNYAYKLLSKLSNPPDY-GWNFVIRGFSNSKNPEK 837
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
+ V ++ R G PD Y L+++ R L + +G +L N LI
Sbjct: 838 SIRVYIQILRSGFSPDHMTYPFLLKSSSRLSNREIGGSLHCSVVKTGLEWDLFISNTLIH 897
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
+ + A +LF M K + T+ S+L+ + ++ +A VF++ DV+
Sbjct: 898 MYGSFRDKASARKLFDEMPYKNL----VTWNSILDSYAKSGDVVSARLVFDEMTMRDVVT 953
Query: 539 ARSILSTFMIS 549
S++ ++ S
Sbjct: 954 WSSMIDGYVKS 964
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 124/279 (44%), Gaps = 34/279 (12%)
Query: 275 GSVFEREVVLKKKRKLGVA-PRTNDYREFILGL---------IVERRICEAKELGEVIVS 324
G V E V + R++G+ P Y + + +VE R+ E ++ G
Sbjct: 155 GLVEEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCG--FHF 212
Query: 325 GKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT-LSTLSNLSKNLCKRNKSDE 383
KFT+ VL + S A+ FN ++ +G + +ST+ L + CK + D+
Sbjct: 213 DKFTLTP-VLQVYCNNGKS---ERALSVFNEILSRGWLDEHISTI--LVVSFCKWGQVDK 266
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
E+ ++L + +++ V++ R+ +A+ + ++M+R G++PD++ Y+ L+
Sbjct: 267 AFELIEMLEERHIRLNYKTFCVLIHGFVKESRIDKAFQLFEKMRRMGMNPDIALYDVLIG 326
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C+ L A L+ ++ SG + L+ FSE E+ + + K +
Sbjct: 327 GLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESEL--------SRITKVIIG 378
Query: 504 DATT------YTSLLEGLCQETNLQAAFE-VFNKSVNHD 535
D T Y SLLEG + + A+ + N NH+
Sbjct: 379 DIDTKSVMLLYKSLLEGFIRNDLVHEAYNFIQNLMGNHE 417
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 3/133 (2%)
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
TD +N M+ L + G +RE+ + +M+ +DPD + L+ AC L++ A
Sbjct: 1053 TDALMWNAMIGGLASHGFIRESLLLFHKMRESEIDPDEITFLCLLAACSHGGLVKEAWHF 1112
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ + SG + Y ++ S G ++ A ML + P + +L G
Sbjct: 1113 FTSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEML---IKPTGSVLGALFNGCIN 1169
Query: 518 ETNLQAAFEVFNK 530
NL+ A V K
Sbjct: 1170 HGNLELAETVGKK 1182
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 176/408 (43%), Gaps = 44/408 (10%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEM-SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
CN L+ L G +D A K+F EM V + V I C ++ ML E+
Sbjct: 183 CNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAEL 242
Query: 216 RKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
E S I +V+ +++ C+ RVEEAF++ + +P + + I+
Sbjct: 243 ---ERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARG 299
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFI---------------------LGL------- 306
E + VL++ G+ P Y + I G+
Sbjct: 300 QRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTY 359
Query: 307 -IVERRICEAKE-------LGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVF--FNFM 356
++ + +C+ E L E++++G T+ + N+++ R +V M
Sbjct: 360 NLIAKALCKEGEMEHAEQILDEMLLAG-MTVHCSLFNSVVAWHLRGTGRLDVVLRLIREM 418
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
+ + P + ++ + LCKR K +E E++ ++ ++ + N ++ LC +
Sbjct: 419 VARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNM 478
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
+EA V++ M G++ D YN +++ CC+ + A +L D M G +L T+N
Sbjct: 479 KEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTF 538
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
+ + +G++E L L M +G+ PD TY ++++G C+ ++ A
Sbjct: 539 LRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKA 586
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/477 (20%), Positives = 209/477 (43%), Gaps = 19/477 (3%)
Query: 90 ILKSLSLSRQINAIDSVLKQVK-VNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
++++L Q++ V +++ N + D Y +I +L + AF + E++ +
Sbjct: 186 LVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERS 245
Query: 149 CEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
I P + N L+ L G ++ A ++ M + S + FG+ I + G
Sbjct: 246 --GIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFG 303
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+V ++L E+ + VI +I C+ EA ++ DE+ + K + Y +
Sbjct: 304 EVDAVLQEMEGF--GITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNL 361
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL-GLIVERRICEAKELGEVIVSG 325
+A+ G + E +L + G+ + + + L R+ L +V+
Sbjct: 362 IAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVAR 421
Query: 326 KFTIDDDVLNALIGSVS--SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+D V+ A I + +A ++F ++ KG ++T + L LC+ N E
Sbjct: 422 FLKPNDAVMTACIQELCKRGKHEEAAEIWF-LVLGKGLGVNIATSNALIHGLCQGNNMKE 480
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+V K + + D +YN+M+ F C + ++ EA + +M ++G PD+ +N+ +
Sbjct: 481 ATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLR 540
Query: 444 ACCR----EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
A C ED+L L DQM + G ++ TY +I + + ++ A + +++
Sbjct: 541 AYCNLGKVEDILH----LLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKN 596
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
G+ P+A Y +L+ G + ++ A V + ++ + ++ M +C L+
Sbjct: 597 GLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLV 653
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 111/504 (22%), Positives = 205/504 (40%), Gaps = 70/504 (13%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S +++ ++ L+ ++ +D+VL++++ IT + +Y +I + + +A +F
Sbjct: 285 SIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLF 344
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF-GVFIWKFCE 201
+E+ N + L +G +++A ++ DEM G+ F V W
Sbjct: 345 DEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRG 404
Query: 202 NAKLGQVLSMLDEVRKR---ENSMINGSVIAVL--------------------------- 231
+L VL ++ E+ R N + + I L
Sbjct: 405 TGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIAT 464
Query: 232 ---IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+IHG C+G ++EA KVL + + D I Y I+ +F S E + L+
Sbjct: 465 SNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMI-QFCCKASKMEEAIQLRDDM 523
Query: 289 -KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPR 347
K G P + F+ R C LG+V +D+L+ L
Sbjct: 524 IKRGFKPDLFTFNTFL------RAYC---NLGKV---------EDILHLL---------- 555
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
+ M +G P + T + CK + + L N + YN ++
Sbjct: 556 ------DQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALI 609
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+G + +A GV+ MK G+ P YNSLM C L+ AK+++ Q
Sbjct: 610 GGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIE 669
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
+ Y I+I F ++G+I+ A+ F M + + P+ TYT+L+ C+ N + AF++
Sbjct: 670 LGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKL 729
Query: 528 FNKSVNHDVMLARSILSTFMISLC 551
F++ V+ ++ +T + C
Sbjct: 730 FDEMVSSGIVPDTVSYNTLISGCC 753
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE-KGVAPDATTYTSLLEGLCQE 518
++ G S ++KT NIL+ G+++ A ++F M + VAPD TYT +++ LC+
Sbjct: 170 ELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRA 229
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ AAF + + + + M +LCR
Sbjct: 230 GEIDAAFVMLAELERSGIQPTVVTYNVLMDALCR 263
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 162/376 (43%), Gaps = 37/376 (9%)
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
A GY A+K+ DEM +G + + V + C+ ++ + L +
Sbjct: 1 ATCKRSGY-KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY--G 57
Query: 222 MINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFERE 281
+V +++ G C +R E+A +++ E+ + C P+ + + ++ G V
Sbjct: 58 CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPAL 117
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV 341
VL++ K G P + Y + C+ K++ +
Sbjct: 118 EVLEQIPKYGCTPNSLSYNPLL------HAFCKQKKMDK--------------------- 150
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
A+ F + M+ +G P + + + L LC+ + D VE+ L +
Sbjct: 151 -------AMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLI 203
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
SYN ++ L +G+ +EA ++ EM KGL PD+ Y+++ CRED + A + + ++
Sbjct: 204 SYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV 263
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G N YN +I + E A+ LF M+ G P+ +TYT L+EGL E +
Sbjct: 264 QDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLI 323
Query: 522 QAAFEVFNKSVNHDVM 537
+ A ++ ++ + V+
Sbjct: 324 KEARDLLDELCSRGVV 339
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 151/323 (46%), Gaps = 5/323 (1%)
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
CK ++A K+LDE+R + C PD + Y +V G V + LK G P T
Sbjct: 3 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62
Query: 297 NDYREFILGLIVERRICEAKEL-GEVIVSG--KFTIDDDVLNALIGSVSSIDPRSAIVFF 353
Y + GL R +A+EL GE+ G + ++L + + ++P A+
Sbjct: 63 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEP--ALEVL 120
Query: 354 NFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTS 413
+ + G P + + L CK+ K D+ + ++ + + D+ SYN +++ LC S
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180
Query: 414 GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTY 473
G + A ++ ++K KG P + YN++++ + + A +L ++M + G ++ TY
Sbjct: 181 GEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITY 240
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVN 533
+ + + IE A+R F + + G+ P+ Y +++ GLC+ +A ++F +
Sbjct: 241 STIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIG 300
Query: 534 HDVMLARSILSTFMISLCRRVLI 556
+ M S + + L LI
Sbjct: 301 NGCMPNESTYTILIEGLAYEGLI 323
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 54/113 (47%)
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
A C+ + A KL D+M GC+ ++ TYN++++ + G ++ A+ N+ G P
Sbjct: 1 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+ +Y +L+GLC + A E+ + + + LCR+ L+
Sbjct: 61 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLV 113
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 51/277 (18%), Positives = 110/277 (39%), Gaps = 16/277 (5%)
Query: 27 ARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP-- 84
A +W E+ + ++G + P++V + L L Q P + +P
Sbjct: 75 AERWEDA-EELMGEMG-QKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNS 132
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
LSY+ +L + ++++ + L + D Y ++ +L + A + ++
Sbjct: 133 LSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 192
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+K + P + N+++ L G AL++ +EM +G++ I + C
Sbjct: 193 LKD--KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRE 250
Query: 203 AKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
++ + +V+ R N+++ + II G CK + A + + C P
Sbjct: 251 DRIEDAIRAFGKVQDMGIRPNTVLYNA-----IILGLCKRRETHSAIDLFAYMIGNGCMP 305
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
+ Y I+ E G + E +L + GV ++
Sbjct: 306 NESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKS 342
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 124/546 (22%), Positives = 228/546 (41%), Gaps = 89/546 (16%)
Query: 32 PLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSIL 91
P LE L++ G+ L P L+ RV++ +L FF WA++QP + HS S++
Sbjct: 82 PKLELALNESGI--DLRPGLIIRVLS-RCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMV 138
Query: 92 KSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCED 151
LS RQ A+ ++++++ K N E
Sbjct: 139 MILSKMRQFGAVWGLIEEMR----------------------------------KTNPEL 164
Query: 152 IGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM 211
I PE+ L+ AS + A+++ DEM G+E FG + C+N + + +
Sbjct: 165 IEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKV 224
Query: 212 LDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
+++R++ + +++G+C+ ++ EA +VL +++ +PD + + + +
Sbjct: 225 FEDMREKFPPNLR---YFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGY 281
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI-VERRICEAKELGEVIVSGKFTID 330
G + + ++ RK G P N Y I L E+R+ EA + + ++ +
Sbjct: 282 AHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRV--FVEMERYGCE 339
Query: 331 DDVL--NALIGSVSS---IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
D++ ALI ID +++ + M +KG +P+ T + K+ + +E +
Sbjct: 340 ADIVTYTALISGFCKWGMIDKGYSVL--DDMRKKGVMPSQVTYMQIMVAHEKKEQFEECL 397
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY------- 438
E+ + + D+ YNV++ C G ++EA + EM+ GL P V +
Sbjct: 398 ELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGF 457
Query: 439 ---NSLMEAC---------------------------CREDLLRPAKKLWDQMF--ASGC 466
L+EAC R+D L AK +W + S C
Sbjct: 458 TSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSC 517
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
N+ + I I G ++ A +M+E + P TY L++GL + N A E
Sbjct: 518 ELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAE 577
Query: 527 VFNKSV 532
+ K V
Sbjct: 578 ITEKVV 583
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 161/340 (47%), Gaps = 8/340 (2%)
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
+ G V +++E+RK +I + VL+ F V++A +VLDE+ +PD
Sbjct: 146 QFGAVWGLIEEMRKTNPELIEPELFVVLM-RRFASANMVKKAVEVLDEMPKYGLEPDEYV 204
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
+ + + GSV E V + R+ P + + G E ++ EAKE+ ++
Sbjct: 205 FGCLLDALCKNGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAKEV--LVQ 261
Query: 324 SGKFTIDDDVL---NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ ++ D++ N L G + A N M ++G P ++ + L + LC+ K
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEK 321
Query: 381 S-DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
DE + V+ + D+ +Y ++S C G + + Y V+ +M++KG+ P Y
Sbjct: 322 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+M A +++ +L ++M GC +L YN++I ++GE++ A+RL++ M
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
G++P T+ ++ G + L A F + V+ + A
Sbjct: 442 GLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSA 481
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 2/204 (0%)
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+ A+ + M + G P L LCK E +V++ + + ++ + +
Sbjct: 184 KKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSL 242
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ C G+L EA V+ +MK GL+PD+ + +L+ + A L + M G
Sbjct: 243 LYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGF 302
Query: 467 SGNLKTYNILISKFSEVGE-IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
N+ Y +LI + ++ A+R+F M G D TYT+L+ G C+ + +
Sbjct: 303 EPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGY 362
Query: 526 EVFNKSVNHDVMLARSILSTFMIS 549
V + VM ++ M++
Sbjct: 363 SVLDDMRKKGVMPSQVTYMQIMVA 386
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 10/158 (6%)
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG---LDPDVSFYNSLMEACCREDLLR 452
YF E MV L + +G+I+EM++ ++P++ + LM ++++
Sbjct: 127 YFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPEL--FVVLMRRFASANMVK 184
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A ++ D+M G + + L+ + G ++ A ++F +M EK P+ +TSLL
Sbjct: 185 KAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLL 243
Query: 513 EGLCQETNLQAAFEVF----NKSVNHDVMLARSILSTF 546
G C+E L A EV + D+++ ++LS +
Sbjct: 244 YGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGY 281
>gi|414877568|tpg|DAA54699.1| TPA: hypothetical protein ZEAMMB73_211194, partial [Zea mays]
Length = 709
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 133/552 (24%), Positives = 230/552 (41%), Gaps = 13/552 (2%)
Query: 8 DLATRISQAIISASNRTRPAR-KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSL 66
DLA + ++ + R R W+ LE L LR +L+PS V V+
Sbjct: 53 DLAQELRSHLVRDTCRLLELRDSWSAKLEAQLRHF-LR-ALTPSQVRAVLRAQAQRDARA 110
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A FF WA +Q + H+P + +L LS +R + V++ + I + + ++
Sbjct: 111 AFEFFRWADRQWKYRHAPEVFDEMLALLSRTRLHDPARRVVRLMIRRGIRRGTRQFAHLM 170
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRG 184
S + + A V ++ + P+IC N + VL G +D AL+ + M G
Sbjct: 171 LSYSRAGKLRSAMRVLQLMQKD--GCAPDICICNVAVNVLVVAGRVDKALEFAERMRRVG 228
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
V+ + + I C ++ + L M+ + +N + ++ CK KRV E
Sbjct: 229 VDPDVVTYNCLIKGLCGARRIVEALEMIGSML--QNGCPPDKISYFTVMSFLCKEKRVAE 286
Query: 245 AFKVLDELRIRE-CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
+ +L+ +R PD I Y ++ G E L++ Y +
Sbjct: 287 VWNLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSAIV 346
Query: 304 LGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGR 361
+ R+ EAKE+ GE+I G D +A++ I + A M + G
Sbjct: 347 HSFCLNGRMSEAKEIIGEMISKG-CRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGC 405
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
P T + L LCK KS E E+ + +Y+V++ G+L E+
Sbjct: 406 KPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVIMHGFRREGKLVESCD 465
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFS 481
V+ +M +KG P N L+ A C+E AK +Q + GC N+ + +I FS
Sbjct: 466 VVMQMLQKGFFPTAVEINLLIHALCKEQKPARAKDFMEQCQSKGCFINVVNFTTVIHGFS 525
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
G++E AL L +M PD TYT +++ L ++ ++ A + K +N ++
Sbjct: 526 RQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATALVEKMLNRGLLPTPV 585
Query: 542 ILSTFMISLCRR 553
T + C +
Sbjct: 586 TYRTVIHRYCEK 597
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/451 (19%), Positives = 186/451 (41%), Gaps = 53/451 (11%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNK-ITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
+SY +++ L +++ + ++L++++ + I D Y +I L + + +A +
Sbjct: 269 ISYFTVMSFLCKEKRVAEVWNLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLR 328
Query: 144 EV---KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E +F + +G ++++ +G + A ++ EM +G + + + FC
Sbjct: 329 ESEGKRFRVDQVGY---SAIVHSFCLNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFC 385
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+L Q M+ + K N +V +++G CK + EA+++L++ P
Sbjct: 386 RIGELDQARKMMKHMYK--NGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPS 443
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
I Y ++ F+ G + E V+ + + G P + I L E++ AK+ E
Sbjct: 444 GITYSVIMHGFRREGKLVESCDVVMQMLQKGFFPTAVEINLLIHALCKEQKPARAKDFME 503
Query: 321 ---------------VIVSGKFTIDDDVLNAL------------------------IGSV 341
++ G F+ D+ +AL +G
Sbjct: 504 QCQSKGCFINVVNFTTVIHG-FSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRK 562
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ +A+V M+ +G +PT T + C++ ++L+ + + F+
Sbjct: 563 GKMKEATALV--EKMLNRGLLPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLTKQGFSS-- 618
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN ++ LC G+L EAY ++ ++ R D + LM++ L + + +M
Sbjct: 619 AYNQVIEKLCAFGKLSEAYNLLSKVLRSASKRDAQTCHILMDSFLNRGLPLQSYNVACRM 678
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRL 492
F +LK + S+ + VGE A +L
Sbjct: 679 FQRNLIPDLKLCQKVDSQLALVGERHAAGKL 709
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/486 (23%), Positives = 212/486 (43%), Gaps = 45/486 (9%)
Query: 85 LSYHSILKSLSLSRQIN-AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFN 143
+S++++L L + +++ A+ + + ++N D Y +I LI+ AF +F+
Sbjct: 613 ISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFP-DVLTYNTVIYGLIKENRVNYAFWLFH 671
Query: 144 EVKFNCEDIGPE---ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF------GV 194
++K + I P+ +C +LL + DG I++A ++ E H + + F G+
Sbjct: 672 QMK---KVIYPDYVTLC-TLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGI 727
Query: 195 FIWK----------------FCEN-----------AKLGQVLSMLDEVRKRENSM-INGS 226
I CE+ K G+ + + K S I S
Sbjct: 728 LIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPS 787
Query: 227 VIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
+ A +I G K + E A+ + +++ C PD Y + + G + E + +
Sbjct: 788 LEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYE 847
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID 345
+ G P T + I GL+ + +A +L ++SG F+ LI + +
Sbjct: 848 EMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLG 907
Query: 346 P-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
A FF M++ G +P + L K+ + E+++ + D++SY+
Sbjct: 908 RLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYS 967
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
+MV LC G++ +A +E+K GLDPD+ YN ++ R + A L+D+M
Sbjct: 968 IMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNR 1027
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G + +L TYN LI G +E A +++ + KG+ P+ TY +L+ G N A
Sbjct: 1028 GITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRA 1087
Query: 525 FEVFNK 530
+ V+ K
Sbjct: 1088 YAVYKK 1093
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/456 (21%), Positives = 201/456 (44%), Gaps = 23/456 (5%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK--NTQKAFSVFN 143
+Y +++ +L R I + +L++++ + L ++Y F I I G+ +A+ +
Sbjct: 229 TYSALMVALGKRRDIETVMGLLQEME--SLGLRPNIYTFTICIRILGRAGKIDEAYGILK 286
Query: 144 EVKFNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ + GP++ L+ L + G ++NA ++F +M + + + + KF +
Sbjct: 287 --RMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSD 344
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ L + E+ + + V ++I CK +V+EAF LD ++ + P+
Sbjct: 345 HGDLDAIKEFWSEMEA--DGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNL 402
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
Y + + + E + LG+ Y FI ++ E G+
Sbjct: 403 HTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFI------DYYGKSGESGKA 456
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDP-------RSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
I + + + ++ ++ +S+ A FFN + + G P T + L +
Sbjct: 457 IKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRC 516
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
K + D+ +++ + N ++ N ++ L + R+ EA+ + Q MK L P
Sbjct: 517 YGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPT 576
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V YN+L+ +E ++ A L+ M A C N ++N L+ + GE++ AL++
Sbjct: 577 VVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLF 636
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
M E PD TY +++ GL +E + AF +F++
Sbjct: 637 RMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQ 672
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/517 (20%), Positives = 222/517 (42%), Gaps = 18/517 (3%)
Query: 45 DSLSPSLVARVINPYLLTHHSL---ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQIN 101
+ + P++VA + Y L A FFN ++ ++Y+ +++ + +++
Sbjct: 466 NGIVPNIVACNASLYSLAEQGRLEEAKEFFN-GLKKCGLAPDAITYNILMRCYGKAGRVD 524
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NS 159
+L +++ N + + +I +L + +A+ +F +K + P + N+
Sbjct: 525 DAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKE--MKLAPTVVTYNT 582
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LLA L +G + A +F M +TI F + C+N ++ L ML R E
Sbjct: 583 LLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKML--FRMTE 640
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+ + +I+G K RV AF + +++ + PD++ + G + +
Sbjct: 641 MNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK-KVIYPDYVTLCTLLPGVIKDGRIED 699
Query: 280 REVVLKK-KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
V K+ +G + + + + G+++E I ++ E +V DD VL L+
Sbjct: 700 AFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLV 759
Query: 339 GSV----SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+ ++D + VF P+L ++L L K ++ ++ +
Sbjct: 760 KFLCKHGKAVDAYN--VFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNA 817
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
D+ +YN+ + L SG+++E + + +EM +G P+ +N ++ + + L A
Sbjct: 818 GCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKA 877
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
L+ + + S TY LI ++G +E A + F ML+ G P+ Y L+ G
Sbjct: 878 IDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNG 937
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
++ +++ A E+F + V + S + LC
Sbjct: 938 FGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLC 974
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 136/284 (47%), Gaps = 5/284 (1%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS-VFEREVVLKKKRK 289
L + K +++E F + +E+ R CKP+ I + IV F L+ S ++ + L
Sbjct: 828 LFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVI--FGLVKSNSLDKAIDLYYDLM 885
Query: 290 LG-VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPR 347
G +P Y I GL+ R+ EAK+ E ++ + + N L+ G D
Sbjct: 886 SGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVE 945
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
+A F M+++G P L + S + LC K D+ + ++ L + D+ YN+M+
Sbjct: 946 TACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMI 1005
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
+ L S R+ EA + EM+ +G+ PD+ YN+L+ ++ A K+++++ G
Sbjct: 1006 NGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLE 1065
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
N+ TYN LI S G + A ++ M+ G P+ T+ L
Sbjct: 1066 PNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 148/390 (37%), Gaps = 36/390 (9%)
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
+L G ID A + M G + + V I C KL + ++ + +S
Sbjct: 271 ILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELF--LKMKASSH 328
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
V + ++ F ++ + E+ PD + + I+ + +G V E
Sbjct: 329 KPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFG 388
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
L +K GVAP + Y I GL+ R+ EA EL
Sbjct: 389 TLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALEL------------------------ 424
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
FN M G T T K +S + ++ ++ + N ++ +
Sbjct: 425 ----------FNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVA 474
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
N + L GRL EA +K+ GL PD YN LM + + A KL +M
Sbjct: 475 CNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEME 534
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
+GC + N LI + ++ A ++F M E +AP TY +LL GL +E +Q
Sbjct: 535 ENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQ 594
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A +F + D +T + LC+
Sbjct: 595 EATALFKGMIADDCPPNTISFNTLLDCLCK 624
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/489 (21%), Positives = 199/489 (40%), Gaps = 45/489 (9%)
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
+S++ +L + +++ + +++K K+ Y ++ L + Q+A ++F +
Sbjct: 546 NSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMI- 604
Query: 148 NCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+D P N+LL L +G +D ALKM M+ + + I+ + ++
Sbjct: 605 -ADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRV 663
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKV----------------- 248
+ +++K + V ++ G K R+E+AF+V
Sbjct: 664 NYAFWLFHQMKK---VIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFW 720
Query: 249 -------LDELRIRE-------------CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
L E I + C+ D + +V K +V V LK +
Sbjct: 721 EDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTK 780
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS-SIDPR 347
+ P Y I GL+ R A L + + T D N + ++ S +
Sbjct: 781 SFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIK 840
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
+ M+ +G P T + + L K N D+ +++Y L + D+ +Y ++
Sbjct: 841 ELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLI 900
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
L GRL EA +EM G P+ YN LM ++ + A +L+ +M G
Sbjct: 901 DGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIR 960
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
+LK+Y+I++ VG+++ AL F + G+ PD Y ++ GL + ++ A +
Sbjct: 961 PDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSL 1020
Query: 528 FNKSVNHDV 536
F++ N +
Sbjct: 1021 FDEMRNRGI 1029
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 135/313 (43%), Gaps = 34/313 (10%)
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+RVE+ V + ++ + K Y + + + G + E V L+K RK+G Y
Sbjct: 136 RRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSY 195
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
+GLI +++ F R A+ + M+ +
Sbjct: 196 ----IGLI------------HLLLKSGFC------------------REALKVYRRMVSE 221
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P+L T S L L KR + ++ + + + + ++ ++ + + L +G++ EA
Sbjct: 222 GIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEA 281
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
YG+++ M G PDV Y L++A C L AK+L+ +M AS + TY L+ K
Sbjct: 282 YGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDK 341
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
FS+ G+++ + M G PD T+T L++ LC+ + AF + V
Sbjct: 342 FSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPN 401
Query: 540 RSILSTFMISLCR 552
+T + L R
Sbjct: 402 LHTYNTLICGLLR 414
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 89/222 (40%), Gaps = 36/222 (16%)
Query: 345 DPRSAIVFFNFMIEKGRV-PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
DP A FFN + E RV T T + + + L + +++V V+ ++ + +Y
Sbjct: 101 DPNQAFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTY 160
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+ L G LREA +++M++ G + Y L+ + R A K++ +M +
Sbjct: 161 LTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVS 220
Query: 464 SGCSGNLKTYN-----------------------------------ILISKFSEVGEIEG 488
G +LKTY+ I I G+I+
Sbjct: 221 EGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDE 280
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
A + M + G PD TYT L++ LC L A E+F K
Sbjct: 281 AYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLK 322
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 113/273 (41%), Gaps = 25/273 (9%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWAS-----------QQPNFTHSPLSYHSILKSLS 95
L ++ R P +TH+ + G S +F+ +P +Y ++ L
Sbjct: 845 LYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLL 904
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE-VKFNCEDIGP 154
++ +++ + +Y ++ + + + A +F VK E I P
Sbjct: 905 KLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVK---EGIRP 961
Query: 155 EICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML 212
++ + + V L G +D+AL F+E+ G++ + + + I + ++ + LS+
Sbjct: 962 DLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLF 1021
Query: 213 DEVRKR---ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
DE+R R + ++I L I G VEEA K+ +EL+++ +P+ Y +
Sbjct: 1022 DEMRNRGITPDLYTYNALILNLGIAGM-----VEEAGKMYEELQLKGLEPNVFTYNALIR 1076
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
+ G+ V KK G P T + +
Sbjct: 1077 GHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 186/410 (45%), Gaps = 29/410 (7%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR- 218
LL +A + + +F + G+ F I FC A+L LS L ++ K
Sbjct: 85 LLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLG 144
Query: 219 -ENSMIN-GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E S++ GS +++GFC R EA ++D++ +P+ + Y + + G
Sbjct: 145 FEPSIVTFGS-----LVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQ 199
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI-CEAKELGEVIVSGKFTIDDDVL- 334
V VLK +K+G+ P Y I L A+ L +++ G I DV+
Sbjct: 200 VNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMG---ISPDVIT 256
Query: 335 -NALIGSVSS----IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
+ALI ++ + +N MI++ P + T ++L LC DE +V
Sbjct: 257 FSALIDVYGKEGQLLEAKKQ---YNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLN 313
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
VL + +F + +YN +++ C + R+ + ++ M R G+D D YN+L + C+
Sbjct: 314 VLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAG 373
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
A+K+ +M + G ++ T+NIL+ + G+I AL ++ + TY
Sbjct: 374 KFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYN 433
Query: 510 SLLEGLCQETNLQAAFEVFN----KSVNHDVMLARSILSTFMISLCRRVL 555
+++GLC+ ++ A+ +F K V+ DV+ T MI L R+ L
Sbjct: 434 IIIKGLCKADKVEDAWYLFCSLALKGVSPDVI----TYITMMIGLRRKRL 479
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 9/205 (4%)
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
RIC ++ F+ D L + SI A+ F M E +P++ S
Sbjct: 34 RICNSRA---------FSGRSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSR 84
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L + K NK + ++ +++ L D+ S+ ++ C RL A + +M + G
Sbjct: 85 LLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLG 144
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+P + + SL+ C + A L DQ+ G N+ YN +I E G++ AL
Sbjct: 145 FEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTAL 204
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGL 515
+ +M + G+ PD TY SL+ L
Sbjct: 205 DVLKHMKKMGIRPDVVTYNSLITRL 229
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 171/413 (41%), Gaps = 66/413 (15%)
Query: 44 RDSLSPSLVARVIN----PYLLTHHSLALGF---------FNWASQQPNFTHSP--LSYH 88
R SL+ S + +++ P ++T SL GF + Q + P + Y+
Sbjct: 129 RLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYN 188
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
+I+ SL Q+N VLK +K I D Y +I L + + +++
Sbjct: 189 TIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMR- 247
Query: 149 CEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
I P++ ++L+ V +G + A K ++EM R V + + + I C
Sbjct: 248 -MGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC------ 300
Query: 207 QVLSMLDEVRKRENSMIN-----GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
+ +LDE +K N +++ +V +I+G+CK KRV++ K+L + D
Sbjct: 301 -IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
Y + + + G E VL + GV P + + GL C+ ++G+
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGL------CDHGKIGKA 413
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
+V L L S + + I+ +N +I K LCK +K
Sbjct: 414 LVR---------LEDLQKSKTVV----GIITYNIII---------------KGLCKADKV 445
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK-GLDP 433
++ ++ L+ D+ +Y M+ L REA+ + ++M+++ GL P
Sbjct: 446 EDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 827
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 189/459 (41%), Gaps = 46/459 (10%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
Y I L + N + A + + + + + N ++ G + AL++ +EM
Sbjct: 359 YSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMK 418
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-IIHGFCKGK 240
G+ + + I FC G V+ LD + + E+S I S+++ +IHG CK
Sbjct: 419 SSGILPDVYSYSILINAFCGK---GDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKN 475
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG-------------------SVFERE 281
++ A + + CK D Y + + F + G + F
Sbjct: 476 MLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCR 535
Query: 282 VVLKKKRKLGVAPRTNDYREFIL--GLIVERRIC--------------EAKELGEVIVSG 325
+++ KLG+ + + +L G+ + C EA L E
Sbjct: 536 SLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEH 595
Query: 326 KFTIDDDVLNALIGSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
F ++ NA+I + P A+ M+++ +P++ S L K++
Sbjct: 596 GFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRA 655
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
V ++ + ++ +Y +++S S ++ EAYG+ +EMK +GL D Y +L+
Sbjct: 656 VNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVG 715
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C ++ A L+++M GCS N+ TY +I F + I+ A +F M V PD
Sbjct: 716 FCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPD 775
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
TYT L++ + A +++ DVM + +L
Sbjct: 776 VVTYTVLIDWYHKHGYFDQAHKLY------DVMKDKGVL 808
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/462 (22%), Positives = 196/462 (42%), Gaps = 20/462 (4%)
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE----- 155
NA+D V K + D F++ L++ + VF E+K D GP
Sbjct: 265 NALD-VFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELK----DRGPSPNIYT 319
Query: 156 ---ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML 212
+ N + + D + A + ++ G + + + + +I C K+G V + L
Sbjct: 320 YTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLC---KVGNVEAAL 376
Query: 213 DEVRKRE--NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
+R N +N +I+GFCK V EA +VL+E++ PD +Y I+
Sbjct: 377 MLIRNLHYTNQPLNSHSFND-VIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINA 435
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
F G V + ++++ + P Y I GL + + A ++ I + D
Sbjct: 436 FCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYD 495
Query: 331 DDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
V LI G D SAI MI VPT + +L + K D+ +EV+
Sbjct: 496 STVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFN 555
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
+ + + D + N ++ C +G +EA ++++ + G + + YN+++ C+E
Sbjct: 556 AMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEG 615
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
A +L +M ++ Y+ LIS F++ + A+ LF M++ G+ + TYT
Sbjct: 616 YPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYT 675
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
L+ + A+ +F + + L + +T ++ C
Sbjct: 676 ILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFC 717
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 191/441 (43%), Gaps = 14/441 (3%)
Query: 79 NFTHSPLSYHS---ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++T+ PL+ HS ++ ++ VL+++K + I D Y +I + +
Sbjct: 383 HYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDV 442
Query: 136 QKAFSVFNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
K + E++ + I P I + SL+ L + NA+ +F + ++ + +
Sbjct: 443 MKCLDLMEEMEHS--QIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYE 500
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
I FC + + +L+E+ N ++ + +I G+ K ++A +V + +
Sbjct: 501 TLIDGFCMQGDMDSAIKLLEEMIC--NELVPTAFSCRSLIRGYYKLGLFDQALEVFNAML 558
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
PD IA + + G E +L+ ++ G + Y I L E
Sbjct: 559 RDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPE 618
Query: 314 EAKELGEVIVSGKFTIDDDVLNA---LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
A EL ++ K + V+N + G + + A+ F M++ G ++T +
Sbjct: 619 RALELLPRML--KRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTI 676
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L +K E ++K + D SY ++ C + +++A+ + +EM R+G
Sbjct: 677 LMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREG 736
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
P+V Y +++ C+ + + A ++D+M ++ TY +LI + + G + A
Sbjct: 737 CSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAH 796
Query: 491 RLFHNMLEKGVAPDATTYTSL 511
+L+ M +KGV PD T+ L
Sbjct: 797 KLYDVMKDKGVLPDDITHNVL 817
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/458 (18%), Positives = 171/458 (37%), Gaps = 111/458 (24%)
Query: 134 NTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
+T + FS F + + E G + + L++V AS+ ++NAL +F H G+E
Sbjct: 228 DTFELFSAFLDSPQHVERSGV-VFDVLISVFASNSMLENALDVFSNAKHVGLE------- 279
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
++R ++ + RVE +V +EL+
Sbjct: 280 -------------------PDIRT-----------CNFLLKCLVEANRVEFVRRVFEELK 309
Query: 254 IRECKPDFIAYRIV----AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
R P+ Y I+ + + + V+L K + G P Y +I GL
Sbjct: 310 DRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGL--- 366
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
C+ +G+V +A++ + + + +
Sbjct: 367 ---CK-----------------------VGNV-----EAALMLIRNLHYTNQPLNSHSFN 395
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
++ CKR + E ++V + + ++ D+ SY+++++ C G + + +++EM+
Sbjct: 396 DVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHS 455
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
+ P + Y SL+ C++++L+ A ++ + AS C + Y LI F G+++ A
Sbjct: 456 QIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSA 515
Query: 490 LRL-----------------------------------FHNMLEKGVAPDATTYTSLLEG 514
++L F+ ML G+ PD +L+G
Sbjct: 516 IKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDG 575
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
C+ + A + H L + + LC+
Sbjct: 576 SCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCK 613
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 155/407 (38%), Gaps = 44/407 (10%)
Query: 83 SPLSYHSILKSLSLSRQI-NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSV 141
S +SY S++ L + NA+D + + + DS+VY +I + A +
Sbjct: 460 SIVSYTSLIHGLCKKNMLQNAVD-IFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKL 518
Query: 142 FNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
E+ C ++ P C SL+ G D AL++F+ M G+ TI +
Sbjct: 519 LEEMI--CNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGS 576
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
C + L++L++ ++ ++ S A II+ CK E A ++L + R P
Sbjct: 577 CRAGYFKEALTLLEDFQEHGFNLNPHSYNA--IIYKLCKEGYPERALELLPRMLKRNVLP 634
Query: 260 DFIAYRIVAEEFKLMGSVFEREV-VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
+ Y + F S F+R V + + K+G+ Y
Sbjct: 635 SVVNYSTLISGFAKQ-SNFKRAVNLFTRMVKVGITFNIATY------------------- 674
Query: 319 GEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
I+ F+ S A F M E+G + + L C
Sbjct: 675 --TILMSIFS-------------HSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNN 719
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+ + +++ +S ++ +Y ++ C S R+ A V +M R + PDV Y
Sbjct: 720 REMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTY 779
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
L++ + A KL+D M G + T+N+L K V E
Sbjct: 780 TVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVLGLKAGTVQE 826
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 109/229 (47%), Gaps = 6/229 (2%)
Query: 332 DVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
DVL ++ S S ++ +A+ F+ G P + T + L K L + N+ + + V++ L
Sbjct: 251 DVLISVFASNSMLE--NALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEEL 308
Query: 392 SANDYFTDMESYNVMVSFLCTS----GRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
++ +Y +M++F C+ +R+A ++ ++ R G P V Y++ + C+
Sbjct: 309 KDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCK 368
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+ A L + + N ++N +I F + GE+ AL++ M G+ PD +
Sbjct: 369 VGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYS 428
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
Y+ L+ C + ++ ++ + + + + ++ + LC++ ++
Sbjct: 429 YSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNML 477
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 173/435 (39%), Gaps = 73/435 (16%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ SD + AL++ ++M G + + + C+ ++L QV +L ++
Sbjct: 215 NILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLL--LQM 272
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + + +++HG+CK K ++EA +V++ + +
Sbjct: 273 KNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGK---------------------- 310
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
G+ P Y + GL E +I EA L + + S K D N L
Sbjct: 311 -------------GMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTL 357
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G +A M +G T + + K C K DE V + + +
Sbjct: 358 IDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGF 417
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK- 455
D +YN M++ C +G++ EAY ++ EM RKGL D N+L+ C E L A
Sbjct: 418 SPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYT 477
Query: 456 ----------------------------------KLWDQMFASGCSGNLKTYNILISKFS 481
KLW++M +G + TYN +I
Sbjct: 478 LTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLC 537
Query: 482 EVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARS 541
G+ + A+ + +LEKG+ PD +T ++ G C E ++ AF+ NK V H +
Sbjct: 538 LSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIF 597
Query: 542 ILSTFMISLCRRVLI 556
+ + LCR ++
Sbjct: 598 TCNILLRGLCREGML 612
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 195/443 (44%), Gaps = 7/443 (1%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+++L +L Q+ + +L Q+K + + + + Y ++ + K ++A V
Sbjct: 247 VTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIEL 306
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ + + P++ N+++ L +G ID A+++ D+M + + + I E+
Sbjct: 307 M--TGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEH 364
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
+++E++ R + V ++I FC +++EA V+ ++ PD
Sbjct: 365 RGSDAAFKLVEEMKAR--GVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCF 422
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + G + E ++ + + G+ T + + +E+++ +A L
Sbjct: 423 TYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKA 482
Query: 323 VSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
+ +D+ LI G A+ + M E G V T+ T + + + LC K+
Sbjct: 483 RKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKT 542
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
D+ V+ L D + N+++ C G + +A+ +M L PD+ N L
Sbjct: 543 DQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNIL 602
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ CRE +L L++ + G + TYNI+IS F + +E A L M K +
Sbjct: 603 LRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNL 662
Query: 502 APDATTYTSLLEGLCQETNLQAA 524
PD TY +++ GL + + A
Sbjct: 663 EPDRYTYNAIVTGLTKAGRTEEA 685
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 128/279 (45%), Gaps = 8/279 (2%)
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA----KELGEVIVSGKFTIDDD 332
VF REV + KLGV P N + I G + EA ++GE +
Sbjct: 193 VFSREV-FQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNT 251
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
VL AL R ++ M G P +T + L CK E EV ++++
Sbjct: 252 VLTALCKRSQLTQVRDLLLQ---MKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMT 308
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D+ +YN MV LC G++ EA + +M+ L PDV YN+L++ C
Sbjct: 309 GKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSD 368
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A KL ++M A G N T+NI+I F G+I+ A + M+E G +PD TY +++
Sbjct: 369 AAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMI 428
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
G C+ + A+++ ++ + L L+T + ++C
Sbjct: 429 NGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMC 467
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 164/365 (44%), Gaps = 7/365 (1%)
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVI 228
++ A ++ + M+ +G+ + + C+ K+ + + + D++ + ++ V
Sbjct: 296 WLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFK--LVPDVVT 353
Query: 229 AVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+I G + + + AFK+++E++ R K + + + I+ + F G + E V+ K
Sbjct: 354 YNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMV 413
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSID 345
+ G +P Y I G ++ EA ++ + + +D LN L+ ++ +D
Sbjct: 414 ESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLD 473
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
A ++G + T L K ++D +++++ + + +YN
Sbjct: 474 --DAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNT 531
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++ LC SG+ +A + E+ KGL PD S N ++ C E + A + ++M
Sbjct: 532 IIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHS 591
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
++ T NIL+ G +E L LF+ + KG D TY ++ C+E L+ AF
Sbjct: 592 LKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAF 651
Query: 526 EVFNK 530
++ +
Sbjct: 652 DLMTE 656
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 164/395 (41%), Gaps = 14/395 (3%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D A K+ +EM RGV+ + + + I FC K+ + +++ V+ E+
Sbjct: 368 DAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVM--VKMVESGFSPDCFTYN 425
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I+G+CK ++ EA+K++DE+ + K D + L + + + K RK
Sbjct: 426 TMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKR 485
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G Y I+G + + A +L E + N +I G S A
Sbjct: 486 GYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQA 545
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ N ++EKG VP ST + + C ++ + + + + D+ + N+++
Sbjct: 546 VDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRG 605
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC G L + + KG D YN ++ + C+E L A L +M +
Sbjct: 606 LCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPD 665
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKG-------VAPDATT----YTSLLEGLCQE 518
TYN +++ ++ G E A +L EKG +P+ T Y+ + LC +
Sbjct: 666 RYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQ 725
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ A ++F ++ V L + M L +R
Sbjct: 726 GKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKR 760
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 4/207 (1%)
Query: 328 TIDDDVLN-ALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV- 385
TI +L+ +L V S P FN M P L T + L L + N S LV
Sbjct: 135 TIPKPLLDTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVF 194
Query: 386 --EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
EV++ ++ ++N+++ C+ EA +I +M G PD YN+++
Sbjct: 195 SREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLT 254
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
A C+ L + L QM SG N TYNIL+ + ++ ++ A + M KG+ P
Sbjct: 255 ALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLP 314
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNK 530
D TY +++ GLC E + A + +K
Sbjct: 315 DVWTYNTMVRGLCDEGKIDEAVRLRDK 341
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 3/137 (2%)
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDL---LRPAKKLWDQMFASGCSGNLKTYNI 475
+ + +MKR P++ N+L+ A R + L +++++ G N+ T+NI
Sbjct: 157 GHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNI 216
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI + E ALRL + M E G PD TY ++L LC+ + L ++ + N
Sbjct: 217 LIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSG 276
Query: 536 VMLARSILSTFMISLCR 552
+ R+ + + C+
Sbjct: 277 LFPNRNTYNILVHGYCK 293
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 185/437 (42%), Gaps = 56/437 (12%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL L G ++ AL+ ++M + GVE + + + F ++L ++ K
Sbjct: 309 NILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGF-------RILGLISGAWK 361
Query: 218 RENSMI-NGS----VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
M+ NG V ++I G C+ +EE+FK+ +++ + K + Y ++
Sbjct: 362 VVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLC 421
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
G + E ++L + +G+ P Y + EA EL E + S + +
Sbjct: 422 KSGRIDEAVILLHEMEVIGLKPDLLTYSR--------GAVEEAIELYEEMCSKRIYPNSF 473
Query: 333 VLNALIG----------------SVSSIDPRSAIVFFNFMI------------------- 357
V +A+I SV+ D I+ +N MI
Sbjct: 474 VCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQI 533
Query: 358 -EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
EKG PT+ T ++L CK+ K E V++ + + +Y +++ C G +
Sbjct: 534 IEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDM 593
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
+ ++ EM+ K + P Y +++ C+E L + +L M+A G + TYN +
Sbjct: 594 HSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTV 653
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I F + +++ A +L + ML+ + P TY L+ GLC NL+ A + + +
Sbjct: 654 IQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSI 713
Query: 537 MLARSILSTFMISLCRR 553
L + +T + + C +
Sbjct: 714 RLTKVAYTTIIKAHCAK 730
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 182/435 (41%), Gaps = 17/435 (3%)
Query: 106 VLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLA 165
V++++ +N + D Y +I Q N +++F + ++ + LL+ L
Sbjct: 362 VVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLC 421
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV---RKRENSM 222
G ID A+ + EM G++ + + + + + + +E+ R NS
Sbjct: 422 KSGRIDEAVILLHEMEVIGLKPDLLTY--------SRGAVEEAIELYEEMCSKRIYPNSF 473
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+ ++I+ L F KG + EA D + + + I Y I+ + + +G++ E
Sbjct: 474 VCSAIISGL----FEKGA-ISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVR 528
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI-VSGKFTIDDDVLNALIGSV 341
K+ + G++P + I G + ++ EA +L + I V G + G
Sbjct: 529 SYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYC 588
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
D S + M K PT T + + K LCK + E V++ K + A F D
Sbjct: 589 EEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQI 648
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN ++ C + L++A+ + +M + L P YN L+ C L+ A +L +
Sbjct: 649 TYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTL 708
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
Y +I G+++ AL FH M+E+G Y++++ LC+ +
Sbjct: 709 QDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLI 768
Query: 522 QAAFEVFNKSVNHDV 536
A F + H +
Sbjct: 769 TDAKFFFCMMLTHGI 783
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 148/351 (42%), Gaps = 28/351 (7%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I G C+ R+++A L E E P +++ + F MGSV + K
Sbjct: 240 ILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKY 299
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-A 349
G+ P Y + GL V + EA E + + D N L + S A
Sbjct: 300 GLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGA 359
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
M+ G P L T + L C+ +E ++ + + + + +Y V++S
Sbjct: 360 WKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSS 419
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYN--------SLMEACCREDL----------- 450
LC SGR+ EA ++ EM+ GL PD+ Y+ L E C + +
Sbjct: 420 LCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAII 479
Query: 451 --------LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVA 502
+ A+ +D + S + + YNI+I ++++G I A+R + ++EKG++
Sbjct: 480 SGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGIS 539
Query: 503 PDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
P T+ SL+ G C++ L A ++ + H ++ +T M C
Sbjct: 540 PTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEE 590
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/488 (19%), Positives = 203/488 (41%), Gaps = 63/488 (12%)
Query: 56 INPYLLTHHSLALGFFNWASQQPNFTH-----------SPLSYHSILKSLSLSRQINAID 104
+NP L+T+ L G + + +F S ++Y +L SL S +I+
Sbjct: 371 LNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAV 430
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCED-IGPE--ICNSLL 161
+L +++V + D Y +G ++A ++ E+ C I P +C++++
Sbjct: 431 ILLHEMEVIGLKPDLLTYS-------RGA-VEEAIELYEEM---CSKRIYPNSFVCSAII 479
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
+ L G I A FD ++ V I + + I + AKLG + + ++
Sbjct: 480 SGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGY---AKLGNIGEAVRSYKQIIEK 536
Query: 222 MINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
I+ +++ +I+GFCK ++ EA K+LD +++ P + Y + + G +
Sbjct: 537 GISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSM 596
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+L + + P Y + GL E R+ E+ +L
Sbjct: 597 FDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQL---------------------- 634
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+M +G P T + + ++ CK + + +++ + +
Sbjct: 635 ------------LKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSP 682
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+YNV+++ LC G L++A ++ ++ + + Y ++++A C + ++ A + Q
Sbjct: 683 VTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQ 742
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
M G +++ Y+ +I++ + I A F ML G+ PD +L + +
Sbjct: 743 MVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGD 802
Query: 521 LQAAFEVF 528
+ FE+F
Sbjct: 803 PNSVFEIF 810
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 143/358 (39%), Gaps = 42/358 (11%)
Query: 114 KITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYID 171
+I +S V II L + +A F+ V + D+ EI N ++ A G I
Sbjct: 467 RIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKS--DVAEEIILYNIMIDGYAKLGNIG 524
Query: 172 NALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL 231
A++ + ++ +G+ + + F I+ FC+ KL + + +LD ++ + ++ SV
Sbjct: 525 EAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKV--HGLVPTSVTYTT 582
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+++G+C+ + F +L E+ + KP I Y +V + G + E +LK G
Sbjct: 583 LMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARG 642
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---------- 341
+ P Y I + +A +L ++ N LI +
Sbjct: 643 LFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDAD 702
Query: 342 --------------------------SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ D ++A+VFF+ M+E+G ++ S + L
Sbjct: 703 RLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRL 762
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
CKRN + + ++ + D + VM++ SG + + M + GL P
Sbjct: 763 CKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 96/224 (42%), Gaps = 38/224 (16%)
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+++T ++L NL +D + +VY + A+ + + +++ LC RL++A +
Sbjct: 202 SIATYNSLLYNL---RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFL 258
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+E + P V +N+LM C+ + AK + M G ++ +YNIL+
Sbjct: 259 RETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVA 318
Query: 484 GEIEGALRLFHNMLEKGVAPDA-----------------------------------TTY 508
G +E AL ++M GV PD TY
Sbjct: 319 GSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTY 378
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
T L+ G CQ N++ +F++ K ++ + L+ + + SLC+
Sbjct: 379 TILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCK 422
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 36/176 (20%)
Query: 397 FTDMESYNVMVSFL-CTSGR---LREAYGVIQEMKRKGLDPDVSFYNSLM---------- 442
F D + NV+ L C R + +A V+ +MK L ++ YNSL+
Sbjct: 161 FRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMW 220
Query: 443 ----------------------EACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+ CR+ L+ A + ++ ++N L+S F
Sbjct: 221 DVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGF 280
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
++G ++ A F M++ G+ PD +Y LL GLC +++ A E N NH V
Sbjct: 281 CKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGV 336
>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
Length = 567
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 141/564 (25%), Positives = 233/564 (41%), Gaps = 81/564 (14%)
Query: 9 LATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLAL 68
L T I+ ++I N P+ K + Q L Q L L ++V +VI Y T+ AL
Sbjct: 20 LVTSIT-SVIQRLNPQNPSPK--NISSQPLDQFSL--CLGSNIVTKVI--YEQTNPYHAL 72
Query: 69 GFFNWASQ---QPN-FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
FFNWAS PN + H+ Y +I L I+ S+LK NK++ F
Sbjct: 73 FFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNS--NKLS------DF 124
Query: 125 IIPSLIQG----KNTQKAFSVFNEVKFNCEDIGPEIC----NSLLAVLASDGYIDNALKM 176
I LI+ N + A F++ K I C NSLL VL N++K+
Sbjct: 125 FISKLIKAYGDRGNVKAAIFWFHQAK----QIENGACLYSYNSLLGVLVRV----NSIKL 176
Query: 177 FDEMSHRGVEFSTI-----GFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL 231
+E H+ V+ + + + I +C+ + + D + + N + +
Sbjct: 177 AEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNT----- 231
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRE-CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I+GFCK +E A V D + E C P+ + Y + + + G + E + + +
Sbjct: 232 MINGFCKKGDMESARLVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNR 291
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
G P Y I GL + R+ EAK L + F D+V
Sbjct: 292 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGF--KDNV----------------- 332
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
ST ++ K LC K D+ V + + + D++SY V+++
Sbjct: 333 ---------------STHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGF 377
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C G+ EA +++EM+ +GL P V +N++ L A L QM C N
Sbjct: 378 CKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNF 437
Query: 471 KTYNILISKFSEV-GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+YN +I G ++ L M+ G D T Y+ LL+G C+E N++ ++ +
Sbjct: 438 VSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAH 497
Query: 530 KSVNHDVMLARSILSTFMISLCRR 553
+ V ++ S + LC +
Sbjct: 498 EMVTKKYVIGLESFSVLVKQLCAK 521
>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 172/396 (43%), Gaps = 11/396 (2%)
Query: 117 LDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKM 176
LD Y +I L + +T A +++ + ++++ L DG + AL +
Sbjct: 180 LDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNL 239
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR----ENSMINGSVIAVLI 232
EM+ +GV + + + I C + + S+LDE+ K + M+N ++
Sbjct: 240 CSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLN------IL 293
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
+ FCK +V +A V+ + + PD Y + + L + E V G
Sbjct: 294 VDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGR 353
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID-PRSAIV 351
P + I G ++ I +A L E + F D LIG P +A
Sbjct: 354 LPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKE 413
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F M + G+VP L T + + LCK N E V + K + ++ ++ Y++++ +C
Sbjct: 414 LFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMC 473
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
++G+L A+ + + KGL +V Y +++ C++ L A+ L M +GC N
Sbjct: 474 SAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNC 533
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
TYN+ + EI +++ M +KG + DA T
Sbjct: 534 TYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAAT 569
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 184/417 (44%), Gaps = 15/417 (3%)
Query: 115 ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEI--CNSLLAVLASDGYID 171
I D+ +I L + K FSV + K E P + +L+ L G +
Sbjct: 108 IEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLE---PTVMTLTTLINGLCVQGNVA 164
Query: 172 NALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV- 230
A+ + D M +GV I C K G L+ + +RK E +V+
Sbjct: 165 QAVGLADHMEKMWYPLDVYTYGVLINGLC---KTGDTLAAVGWLRKMEERNWKPNVVVYS 221
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
I+ G CK V EA + E+ + +P+ + Y + + G E +L + K+
Sbjct: 222 TIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKM 281
Query: 291 GVAPRTNDYREFILGLIVERRICEAKE-LGEVIVSGKFTIDDDVLNALIGSVSSIDPR-- 347
G+ P + E ++ +AK +G +I++G+ D N+LI + + +
Sbjct: 282 GMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGP-DVFTYNSLI-HIYCLQNKMN 339
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A+ F+ M+ +GR+P + ++L CK ++ + + + +S + D+ ++ ++
Sbjct: 340 EAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLI 399
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCS 467
C +GR A + M + G P++ +++ C+E+LL A L M S
Sbjct: 400 GGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLD 459
Query: 468 GNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
N+ Y+IL+ G++ A LF ++ KG+ + YT +++GLC++ +L A
Sbjct: 460 LNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKA 516
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 127/265 (47%), Gaps = 11/265 (4%)
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
++VA F ++G++F KLG+ P I GL V+ + +A L + +
Sbjct: 126 KLVAFGFSVLGTMF----------KLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEK 175
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ +D LI G + D +A+ + M E+ P + S + LCK E
Sbjct: 176 MWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSE 235
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+ + ++ ++ +Y ++ LC GR +EA ++ EM + G+ PD+ N L++
Sbjct: 236 ALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVD 295
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
A C+E + AK + M +G ++ TYN LI + ++ A+R+FH M+ +G P
Sbjct: 296 AFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLP 355
Query: 504 DATTYTSLLEGLCQETNLQAAFEVF 528
D +TSL+ G C++ N+ A +
Sbjct: 356 DIVVFTSLIHGWCKDKNINKAMHLL 380
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 140/368 (38%), Gaps = 36/368 (9%)
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G+E + + I C + Q + + D + K + + VLI +G CK
Sbjct: 142 GLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPL-DVYTYGVLI-NGLCKTGDTL 199
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
A L ++ R KP+ + Y + + G V E + + GV P Y I
Sbjct: 200 AAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLI 259
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVP 363
GL R EA L +D+ M++ G P
Sbjct: 260 QGLCNFGRWKEAGSL----------LDE------------------------MMKMGMRP 285
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
L L+ L CK K + V + D+ +YN ++ C ++ EA V
Sbjct: 286 DLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVF 345
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
M +G PD+ + SL+ C++ + A L ++M G ++ T+ LI F +
Sbjct: 346 HLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQA 405
Query: 484 GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSIL 543
G A LF NM + G P+ T +L+GLC+E L A + ++ L I
Sbjct: 406 GRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIY 465
Query: 544 STFMISLC 551
S + +C
Sbjct: 466 SILLDGMC 473
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 120/292 (41%), Gaps = 14/292 (4%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
+GF + P+ +Y+S++ L ++N V + D V+ +I
Sbjct: 310 IGFMILTGEGPDV----FTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIH 365
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIG--PEICN--SLLAVLASDGYIDNALKMFDEMSHR 183
+ KN KA + E+ +G P++ +L+ G A ++F M
Sbjct: 366 GWCKDKNINKAMHLLEEM----SKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKY 421
Query: 184 GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVE 243
G + V + C+ L + +S L + ++ N +N VI +++ G C ++
Sbjct: 422 GQVPNLQTCAVILDGLCKENLLSEAVS-LAKAMEKSNLDLN-IVIYSILLDGMCSAGKLN 479
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
A+++ L + + + Y I+ + GS+ + E +L + G P Y F+
Sbjct: 480 AAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFV 539
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNF 355
GL+ ++ I + + ++ F++D +I +S+ + + I F F
Sbjct: 540 QGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYLSTNEGDTKIREFLF 591
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 196/435 (45%), Gaps = 10/435 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+ ++ L+ ++ ++ ++++K + Y +I L+ +KA ++ E
Sbjct: 267 VTYNVVINGLARKGELEKAAQLVDIMRLSK-KASAFTYNPLITGLLARDFVEKAGALLLE 325
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ E I P + N+L+ L G + A FDEM +G+ I + I +C+
Sbjct: 326 MEN--EGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKA 383
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
L Q L + ++++ + + +V+ ++I G+C+ +E A ++ +E+ +C PD
Sbjct: 384 GNLKQALCLFGDLKR---AGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDV 440
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
Y I+ ++ ++ + + G+ P Y I + I A +L E
Sbjct: 441 CTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREE 500
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
++ + D N LI G + + A V + M+ G T + L C+R +
Sbjct: 501 MMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGR 560
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
E ++ + A+ + +Y + + C G L AYG ++M +G++P+ YN
Sbjct: 561 LIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNV 620
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
LM A CR A + + +M G N TY +LI + G A+RL+ M +KG
Sbjct: 621 LMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKG 680
Query: 501 VAPDATTYTSLLEGL 515
+ PD T+ +L +G
Sbjct: 681 IHPDHCTHNALFKGF 695
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 182/422 (43%), Gaps = 6/422 (1%)
Query: 135 TQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGF 192
+ + S F E+ + + P + CN +L VL D+ ++ +M GVE S +
Sbjct: 175 STQCLSAFQEMARH--GVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTY 232
Query: 193 GVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL 252
+ FC+ ++ Q +++L ++ R + V ++I+G + +E+A +++D +
Sbjct: 233 NTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM 292
Query: 253 RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRI 312
R+ + K Y + V + +L + G+ P Y I GL
Sbjct: 293 RLSK-KASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNA 351
Query: 313 CEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
A+ + + + D N+LI G + + + A+ F + G PT+ T + L
Sbjct: 352 EAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNIL 411
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
C+ + + + ++ D D+ +Y ++++ C L EM KGL
Sbjct: 412 IDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGL 471
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
+PD YN+ + A + A +L ++M G S + TYN+LI + G ++ A
Sbjct: 472 EPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYV 531
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
L+ M+ G+ D TYT L+ C+ L A +F+ V + + + F+ + C
Sbjct: 532 LWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYC 591
Query: 552 RR 553
RR
Sbjct: 592 RR 593
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 182/419 (43%), Gaps = 18/419 (4%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFD 178
Y ++ S + +A ++ +++ P N ++ LA G ++ A ++ D
Sbjct: 231 TYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVD 290
Query: 179 EM--SHRGVEFS--TIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LII 233
M S + F+ + G+ F E A ++L E+ EN I +V+ +I
Sbjct: 291 IMRLSKKASAFTYNPLITGLLARDFVEKAG-----ALLLEM---ENEGIVPTVVTYNTLI 342
Query: 234 HGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVA 293
G K E A DE+R + PD I Y + + G++ + + ++ G+
Sbjct: 343 DGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLG 402
Query: 294 PRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI-VF 352
P Y I G + A+ L E + D L+ + + + +F
Sbjct: 403 PTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIF 462
Query: 353 FNFMIEKGRVP-TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
F+ M+ KG P + + +S L ++ ++ + + +D +YNV++ LC
Sbjct: 463 FDEMLSKGLEPDCFAYNTRISAELTIGAITNAF-QLREEMMLRGISSDTVTYNVLIDGLC 521
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
+G L++AY + +M GL D Y L+ A C L AK ++D M ASG S ++
Sbjct: 522 KTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVV 581
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TY I I + G + A F MLE+GV P+ TY L+ LC+ ++A++ F++
Sbjct: 582 TYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHE 640
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 95/243 (39%), Gaps = 40/243 (16%)
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSD 382
+S KF+ + ++ S S+ + F M G P + + + + L + D
Sbjct: 156 MSTKFSAECQAQKSVPASCST----QCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWD 211
Query: 383 ELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG---LDPDVSF-- 437
++ VY + + +YN ++ C +GR+ +A ++++M+ + L DV++
Sbjct: 212 DMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNV 271
Query: 438 -------------------------------YNSLMEACCREDLLRPAKKLWDQMFASGC 466
YN L+ D + A L +M G
Sbjct: 272 VINGLARKGELEKAAQLVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGI 331
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ TYN LI + G E A F M KG+ PD TY SL+ G C+ NL+ A
Sbjct: 332 VPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALC 391
Query: 527 VFN 529
+F
Sbjct: 392 LFG 394
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 167/380 (43%), Gaps = 23/380 (6%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L+ L +G + A ++ EM+H G++ ++ + + + C+ K + R+
Sbjct: 320 NRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAF-------DARR 372
Query: 218 RENSMINGS-----VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
EN + +G V ++H +C + A ++LDE+ + C P+ Y ++ +
Sbjct: 373 VENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLW 432
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
G E E +L++ + G + T I GL R+ A + IV G +
Sbjct: 433 RAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMD----IVDGMWEEGSG 488
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
L L S S+ S+I + +P T S L LCK + DE + +
Sbjct: 489 ALGRLGNSFLSVVSDSSI-------SQRCLPDQITYSILISALCKEGRFDEAKKKLLEMI 541
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D D Y+ + C G+ A V+++M++KG +P YN L+ +
Sbjct: 542 VKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSE 601
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
KL +M G S N+ TYN LI F + G + A+ L ML+ + P+ T++ L+
Sbjct: 602 EIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLI 661
Query: 513 EGLCQETNLQAAFEVFNKSV 532
+ C+ T+ +A VF+ ++
Sbjct: 662 KAYCKITDFPSAQMVFDAAL 681
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 167/379 (44%), Gaps = 54/379 (14%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL L G ++ A ++FD M R EFS FG+ +C + L +LD +
Sbjct: 149 NLLLQALCDAGRMELAQRVFDAMPARN-EFS---FGILARGYCRAGRSIDALKVLDGM-P 203
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
N ++ +V+A GFCK VEEA ++++ +R++ P+ + + G V
Sbjct: 204 SMNLVVCNTVVA-----GFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRV 258
Query: 278 FEREVV---LKKKRKLGVAPRTND--YREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
+ + +++ + G+ PR + + + G + EA+ L +++ G F +
Sbjct: 259 LDAYRIFQDMQEDWQHGL-PRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVE 317
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE--VYKV 390
N + + ++ GRV ++ EL+ ++
Sbjct: 318 SYNR---------------WLSGLVRNGRV----------------GEAQELLREMAHEG 346
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ N Y +YN++VS LC G+ +A V ++ + PDV Y SL+ A C +
Sbjct: 347 IQPNSY-----TYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGN 401
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ A ++ D+M GC+ N TYN+L+ G A RL M EKG + D
Sbjct: 402 IAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNI 461
Query: 511 LLEGLCQETNLQAAFEVFN 529
+++GLC+ + L A ++ +
Sbjct: 462 IIDGLCRNSRLDVAMDIVD 480
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/446 (21%), Positives = 185/446 (41%), Gaps = 67/446 (15%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+CN+++A +G ++ A ++ + M +G+ + + F I C K G+VL
Sbjct: 209 VCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALC---KAGRVLDAYRIF 265
Query: 216 RKRENSMING-----SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEE 270
+ + +G V +++ GFC V+EA ++D +R +Y
Sbjct: 266 QDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSG 325
Query: 271 FKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
G V E + +L++ G+ P + Y + GL E + +A+ + I SG + D
Sbjct: 326 LVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPD 385
Query: 331 DDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
+L+ + S + +A + M +KG P T + L ++L + ++ E + +
Sbjct: 386 VVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLE 445
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD----------------- 432
++ Y D N+++ LC + RL A ++ M +G
Sbjct: 446 RMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSS 505
Query: 433 ------PDVSFYNSLMEACCREDLLRPAKK---------------LWD------------ 459
PD Y+ L+ A C+E AKK ++D
Sbjct: 506 ISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKT 565
Query: 460 --------QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
M GC+ + +TYN+LI F E + E ++L M EKG++P+ TY SL
Sbjct: 566 SLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSL 625
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVM 537
++ CQ+ + A + ++ + ++++
Sbjct: 626 IKSFCQQGMVNKAMPLLDEMLQNELV 651
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
PT + L + ++ D + +YK L + D+ + N+++ LC +GR+ A V
Sbjct: 108 PTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRV 167
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
M + + SF L CR A K+ D M S NL N +++ F +
Sbjct: 168 FDAMPARN---EFSF-GILARGYCRAGRSIDALKVLDGM----PSMNLVVCNTVVAGFCK 219
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
G +E A RL M +G+AP+ T+ + + LC+ + A+ +F
Sbjct: 220 EGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQ 266
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 145/319 (45%), Gaps = 7/319 (2%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I G CK +R EA+ +L+E+ C PD Y + F + V ++ G
Sbjct: 60 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 119
Query: 292 VAPRTNDYREFILGLIVERRICEAKEL-GEVIVSGKFTIDDDVLNALIGSVSSIDP-RSA 349
P Y I GL E R+ EA +L G +I SG + N+LI + A
Sbjct: 120 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 179
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ M E G P + T + L CK + D+ ++ ++ ++ ++ ++
Sbjct: 180 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDG 239
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK-LWDQMFASGCSG 468
LC RL +A ++ EM+RK P V YN++++ CR + L A+K + ++M C
Sbjct: 240 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEM---DCPP 296
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N+ ++NI+I +V A+ L + PD YT++++ LC+E + A V+
Sbjct: 297 NVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVY 356
Query: 529 NKSVNHDVMLARSI-LSTF 546
K + L SI STF
Sbjct: 357 RKMLEEPGCLPNSITYSTF 375
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 102/192 (53%), Gaps = 1/192 (0%)
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG 421
VPT T ++L LCK ++ E ++ + + + D+ +Y +++ C S + +A
Sbjct: 51 VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 422 VIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG-CSGNLKTYNILISKF 480
V +++ +G PDV Y+ L++ C+E L+ A L+ +M SG C N TYN LIS F
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
+G+++ A+ L M E G +PD TYT+L+ G C+ L A+++ N+ +
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230
Query: 541 SILSTFMISLCR 552
++ M LCR
Sbjct: 231 VTFTSLMDGLCR 242
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 111/218 (50%), Gaps = 6/218 (2%)
Query: 335 NALIGSVSSIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
N+LI + + S A M+ G +P + T + L CK KSD+ + V++ L A
Sbjct: 58 NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 117
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG-LDPDVSFYNSLMEACCREDLLR 452
+ D+ +Y+ ++ LC GRL+EA + M + G P+ YNSL+ CR +
Sbjct: 118 RGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMD 177
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
A L ++M +G S ++ TY L++ F ++ ++ A L + M KG+ P+ T+TSL+
Sbjct: 178 EAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLM 237
Query: 513 EGLCQETNLQAAFEVFN----KSVNHDVMLARSILSTF 546
+GLC+E L A + KS + V +IL +
Sbjct: 238 DGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGY 275
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 168/402 (41%), Gaps = 50/402 (12%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QP H S+ L+ R A ++V + Y +I L + +
Sbjct: 18 QPKRCHVHGSHRRALQRWPGRRGCGAAVQDAEEVPT------AVTYNSLISGLCKAERAS 71
Query: 137 KAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
+A+ + E+ ++ P+I +L+ D+AL++F+++ RG + +
Sbjct: 72 EAYDLLEEMVYS--GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 129
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
I C+ +L + + + + K + M N +V +I GFC+ +++EA +L+ +
Sbjct: 130 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPN-TVTYNSLISGFCRMGKMDEAMNLLERMAE 188
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
PD + Y + F + + + +L + + G+ P + + GL E R+ +
Sbjct: 189 TGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSD 248
Query: 315 AKE-LGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
A LGE M K PT+ T + +
Sbjct: 249 AVHILGE-----------------------------------MRRKSCSPTVYTYNTILD 273
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
C+ N+ +E + +L D ++ S+N+M+ LC R EA +++E +R+ +P
Sbjct: 274 GYCRVNQLEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNP 331
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFAS-GCSGNLKTYN 474
DV Y ++++ CRE + A +++ +M GC N TY+
Sbjct: 332 DVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYS 373
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 182/404 (45%), Gaps = 31/404 (7%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N ++A L G +ALK+FDEM GV + I + I + L R
Sbjct: 20 NVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGF------RL 73
Query: 218 RENSMINGS----VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE---- 269
R+ + +G V +++ G C+ R++E ++DE+ PD Y I+ +
Sbjct: 74 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133
Query: 270 --EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL--GLIVERRICEAKELGEVIVSG 325
E + M S+F LKK LG Y IL GL + ++ +A+++ E++V
Sbjct: 134 TGESRTMLSLFAES--LKKGVMLGA------YTCSILLNGLCKDGKVAKAEQVLEMLVHT 185
Query: 326 KFTIDDDVLNALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
+ N LI + D R A F M + P T + L LCK +
Sbjct: 186 GLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKA 245
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
++ + + +E++N ++ T+G+L + + V+ +M++KG+ DV + S+++A
Sbjct: 246 EDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKA 305
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C+ + A + D M + N + YN +I + E G+ E A L M GV+
Sbjct: 306 FCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSAS 365
Query: 505 ATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSILS 544
TY LL+GLC+ + + A E+ N+ + DV+ +I+S
Sbjct: 366 IVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIIS 409
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/431 (20%), Positives = 183/431 (42%), Gaps = 7/431 (1%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+PN ++Y+ +L L + +++ ++ ++ + + D Y + L + ++
Sbjct: 83 KPNI----VTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESR 138
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
S+F E +G C+ LL L DG + A ++ + + H G+ +T+ + I
Sbjct: 139 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLI 198
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
+C+ L + ++++ R + + +I+G CK + V +A ++ E+
Sbjct: 199 NGYCQVRDLRGAFCIFEQMKSRH--IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 256
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
P + + + + G + + VL ++ G+ + + +I EA
Sbjct: 257 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 316
Query: 317 ELGEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ + ++ + V N++I + + S D A + M G ++ T + L K L
Sbjct: 317 AILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGL 376
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C+ ++ DE E+ L D+ SYN ++S C G +A ++QEM + G+ P +
Sbjct: 377 CRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTL 436
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y++L+ A + + L+ QM + Y I++ + L
Sbjct: 437 RTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKE 496
Query: 496 MLEKGVAPDAT 506
M EKG+A D T
Sbjct: 497 MSEKGIAFDDT 507
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 158/350 (45%), Gaps = 21/350 (6%)
Query: 174 LKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG---QVLSMLDEVRKRENSMINGSVIAV 230
L +F E +GV + + C++ K+ QVL ML ++ +VI
Sbjct: 141 LSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEML-----VHTGLVPTTVIYN 195
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I+G+C+ + + AF + ++++ R +PD I Y + + V + E ++ + K
Sbjct: 196 TLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKS 255
Query: 291 GVAPRTNDYREFI--LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS 348
GV P + I G + C L ++ G I DV++ GSV ++
Sbjct: 256 GVDPSVETFNTLIDAYGTAGQLEKC-FTVLSDMQQKG---IKSDVIS--FGSVVKAFCKN 309
Query: 349 -----AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
A+ + MI K P +++ + +++ + + + + + +Y
Sbjct: 310 GKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTY 369
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
N+++ LC S ++ EA +I ++ +GL PDV YN+++ ACC + A +L +M
Sbjct: 370 NLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNK 429
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
G L+TY+ L+S + G + L+ ML K V P ++ Y +++
Sbjct: 430 YGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVD 479
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 74/154 (48%)
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D SYNV+++ L SG+ +A V EM G+ P+ YN++++ + L +L
Sbjct: 15 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLR 74
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
DQM G N+ TYN+L+S G ++ L M + PD TY+ L +GL +
Sbjct: 75 DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 134
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ +F +S+ VML S + LC+
Sbjct: 135 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCK 168
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 91/204 (44%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F+ M++ G VP T + + K + + + + ++ +YNV++S
Sbjct: 35 ALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLS 94
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC +GR+ E ++ EM + PD Y+ L + R R L+ + G
Sbjct: 95 GLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVML 154
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
T +IL++ + G++ A ++ ++ G+ P Y +L+ G CQ +L+ AF +F
Sbjct: 155 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 214
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
+ + + + + LC+
Sbjct: 215 EQMKSRHIRPDHITYNALINGLCK 238
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
PD YN ++ R A K++D+M G N TYN +I + G++E RL
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQ---------AAFEVFNKSVNHDVML----- 538
ML G P+ TY LL GLC+ + A+ +F + ++
Sbjct: 74 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133
Query: 539 ---ARSILSTFMISLCRRVLI 556
+R++LS F SL + V++
Sbjct: 134 TGESRTMLSLFAESLKKGVML 154
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 63/142 (44%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
QQ +S+ S++K+ + +I ++L + + ++ VY II + I+ +T
Sbjct: 288 QQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDT 347
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
++AF + ++K + N LL L ID A ++ + ++G+ + +
Sbjct: 348 EQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTI 407
Query: 196 IWKFCENAKLGQVLSMLDEVRK 217
I C + L +L E+ K
Sbjct: 408 ISACCNKGDTDKALELLQEMNK 429
>gi|242034189|ref|XP_002464489.1| hypothetical protein SORBIDRAFT_01g019340 [Sorghum bicolor]
gi|241918343|gb|EER91487.1| hypothetical protein SORBIDRAFT_01g019340 [Sorghum bicolor]
Length = 585
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 187/439 (42%), Gaps = 44/439 (10%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMF 177
DS +I L++ T KA V + + CN L+A L +G + +A+K+
Sbjct: 157 DSKCCVRLIRGLVRTGKTNKARHVLEVMVLSGGVPDTITCNMLIARLCCEGQLSSAMKVL 216
Query: 178 DEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFC 237
++M G S I F I C + + +S E K + + L++ C
Sbjct: 217 EDMRFTGCSPSGITFNTLIRCMCSHHMYDRAISFWKEQLKL--GWPPYEMTSTLLVDLIC 274
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K A +VLDEL + C+PD ++Y + G + +++L G+ P
Sbjct: 275 KKCGPMRALEVLDELGLEGCQPDVVSYNTLISVSCKAGCLKNAKLILTHLSAEGLEPNGT 334
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMI 357
Y I+ +C+ + EV D+L + + D + +F N+
Sbjct: 335 TY------CILLHSLCDKRRWSEV---------GDLLAHMKQANHKPDVTAYNIFINY-- 377
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
C+ D+ ++V +V+ F D+ +YN +++ + G +
Sbjct: 378 -----------------FCRYGYLDQAIDVLEVMVNEKCFPDIVTYNTLLNAISKRGMVE 420
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
EA G+ ++ G YN+L++A ++ + A L+D+M G S + TY L+
Sbjct: 421 EALGIFHSIRENGCQVVRITYNTLIDALAKKGEVINAMTLFDEMTVDGISPDDVTYGSLV 480
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
F + + AL L + ML G ATT++ +++ LC+ N +AA E+ VM
Sbjct: 481 MGFCKKNMAKEALELLNQMLALGFEVKATTFSMMIQSLCKGCNTEAAAEILR------VM 534
Query: 538 LARSI--LSTFMISLCRRV 554
++R++ S F +S+ RV
Sbjct: 535 VSRNVNHRSAFYLSIVTRV 553
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 110/273 (40%), Gaps = 13/273 (4%)
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSA 349
G P + I GL+ + +A+ + EV+V D N LI + SA
Sbjct: 153 GQVPDSKCCVRLIRGLVRTGKTNKARHVLEVMVLSGGVPDTITCNMLIARLCCEGQLSSA 212
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
+ M G P+ T + L + +C + D + +K + + ++V
Sbjct: 213 MKVLEDMRFTGCSPSGITFNTLIRCMCSHHMYDRAISFWKEQLKLGWPPYEMTSTLLVDL 272
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
+C A V+ E+ +G PDV YN+L+ C+ L+ AK + + A G N
Sbjct: 273 ICKKCGPMRALEVLDELGLEGCQPDVVSYNTLISVSCKAGCLKNAKLILTHLSAEGLEPN 332
Query: 470 LKTYNILIS------KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
TY IL+ ++SEVG+ L +M + PD T Y + C+ L
Sbjct: 333 GTTYCILLHSLCDKRRWSEVGD------LLAHMKQANHKPDVTAYNIFINYFCRYGYLDQ 386
Query: 524 AFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
A +V VN +T + ++ +R ++
Sbjct: 387 AIDVLEVMVNEKCFPDIVTYNTLLNAISKRGMV 419
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 88/216 (40%), Gaps = 37/216 (17%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M+ G+VP L + L + K+++ V +V+ + D + N++++ LC G+
Sbjct: 149 MVLHGQVPDSKCCVRLIRGLVRTGKTNKARHVLEVMVLSGGVPDTITCNMLIARLCCEGQ 208
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW----------------- 458
L A V+++M+ G P +N+L+ C + A W
Sbjct: 209 LSSAMKVLEDMRFTGCSPSGITFNTLIRCMCSHHMYDRAISFWKEQLKLGWPPYEMTSTL 268
Query: 459 ------------------DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
D++ GC ++ +YN LIS + G ++ A + ++ +G
Sbjct: 269 LVDLICKKCGPMRALEVLDELGLEGCQPDVVSYNTLISVSCKAGCLKNAKLILTHLSAEG 328
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFN--KSVNH 534
+ P+ TTY LL LC + ++ K NH
Sbjct: 329 LEPNGTTYCILLHSLCDKRRWSEVGDLLAHMKQANH 364
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 86/189 (45%), Gaps = 20/189 (10%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
L A+ +P+ T + + + L + I+ ++ ++ + K D Y ++
Sbjct: 356 LAHMKQANHKPDVTAYNIFINYFCRYGYLDQAIDVLEVMVNE----KCFPDIVTYNTLLN 411
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
++ + ++A +F+ ++ N + N+L+ LA G + NA+ +FDEM+ G+
Sbjct: 412 AISKRGMVEEALGIFHSIRENGCQVVRITYNTLIDALAKKGEVINAMTLFDEMTVDGISP 471
Query: 188 STIGFGVFIWKFCEN--AK-----LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
+ +G + FC+ AK L Q+L++ EV+ SM +I CKG
Sbjct: 472 DDVTYGSLVMGFCKKNMAKEALELLNQMLALGFEVKATTFSM---------MIQSLCKGC 522
Query: 241 RVEEAFKVL 249
E A ++L
Sbjct: 523 NTEAAAEIL 531
>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 123/539 (22%), Positives = 217/539 (40%), Gaps = 94/539 (17%)
Query: 61 LTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVN-KITLDS 119
L +A FFNWAS Q F H+ +Y+++ LS +RQ NA S+L VN + +
Sbjct: 105 LKSWKIAYRFFNWASDQGGFNHNCYTYNAMASCLSHARQ-NAPLSLLSMDIVNSRCAMSP 163
Query: 120 SVYRFIIPSLIQGKNTQKAFSVFNEVK-----------FNCEDIGPEICNSLLAVLASDG 168
F I L ++A +F++VK FNC LL ++ G
Sbjct: 164 GALGFFIRCLGSTGLVEEANLLFDQVKMMRLCVPNSYSFNC----------LLEAISKSG 213
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVI 228
ID EM G E + +C + K + LS+ +E+ R ++G V+
Sbjct: 214 SIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGR--GWVDGHVL 271
Query: 229 AVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
++L++ F K V++AF++++ + + + + ++ F V + + KK +
Sbjct: 272 SILVL-TFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQ 330
Query: 289 KLGVAPRTNDYREFILGLIVERRI-------CEAKELGEVIVSGKFTIDDD--VLNALIG 339
K G AP + Y I GL ++ I E KELG ID D +L+ LI
Sbjct: 331 KSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELG---------IDPDIQILSKLIA 381
Query: 340 SVS--------------SIDPRSAIVFFN------------------------------- 354
S +D + ++ +N
Sbjct: 382 YCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNF 441
Query: 355 -----FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
FM+++ P ++ S + LC K D + +++ + ++ YN ++
Sbjct: 442 EVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDK 501
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
L S RL E Y +++EMK G P +NS+ CR + + A + +M G
Sbjct: 502 LSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPW 561
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+K Y +L+ + + A M+ +G PD Y++ ++G + + A E+F
Sbjct: 562 IKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIF 620
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/524 (20%), Positives = 218/524 (41%), Gaps = 69/524 (13%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
S++ +L+++S S I+ ++ LK++ + D ++ + + KA SVFNE+
Sbjct: 201 SFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEI 260
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + + + L+ + G +D A ++ + M G+ + F V I F +++
Sbjct: 261 -YGRGWVDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRV 319
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD----- 260
+ L + +++K + + +I G C K +E+A +L E++ PD
Sbjct: 320 DKALQLFKKMQK--SGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILS 377
Query: 261 -FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
IAY +EE + + ER L + L + Y + GL+ + + +A L
Sbjct: 378 KLIAY--CSEEVDIYRLIEERLEDLDTEAMLLL------YNSVLNGLVNGKSVDKAYYLL 429
Query: 320 EVIVSGKFT-------------------------IDD-------DVLNALIGSVSSIDPR 347
+ +T ID D+ +L + + +
Sbjct: 430 RAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCK 489
Query: 348 SAIVFFNFMIEK--------------------GRVPTLSTLSNLSKNLCKRNKSDELVEV 387
++ +N +I+K G PT T +++ LC+R +++
Sbjct: 490 QNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDM 549
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
+ + + + ++ Y ++V LC R EA + EM R+G PD+ Y++ ++ +
Sbjct: 550 VREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVK 609
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+ A +++ + A G ++ YN LI+ F +V + A + M+ KG+ P T
Sbjct: 610 IKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVT 669
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
Y L++G C+ ++ AF ++ V + +T + LC
Sbjct: 670 YNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLC 713
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 166/424 (39%), Gaps = 45/424 (10%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDN--ALKMFD 178
+Y ++ L+ GK+ KA+ LL + D Y DN K F
Sbjct: 408 LYNSVLNGLVNGKSVDKAYY-------------------LLRAMTGDNYTDNFEVNKFF- 447
Query: 179 EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML-DEVRK--RENSMINGSVIAVLIIHG 235
M V T F + I C KL LS+ D VR ++N ++ ++I L
Sbjct: 448 -MVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKL---- 502
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV------LKKKRK 289
R+EE + +L E++ +P + + G + RE V +++ R
Sbjct: 503 -SNSNRLEECYLLLKEMKGSGFRPTQFTHN------SIFGCLCRREDVTGALDMVREMRV 555
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RS 348
G P Y + L +R EA +V F D +A I I
Sbjct: 556 HGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQ 615
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F + +G P + + L CK + E ++ + A + +YN+++
Sbjct: 616 ALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLID 675
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C +G + +A+ + M K +P+V Y +L++ C A LW++M GCS
Sbjct: 676 GWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSP 735
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N ++ LI + G + AL F M E+ PD Y +L+ N AFE+
Sbjct: 736 NRISFIALIHGLCKCGWPDAALLYFREMGERE-TPDTIVYVALITSFISNKNPTLAFEIL 794
Query: 529 NKSV 532
+ V
Sbjct: 795 KEMV 798
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 101/494 (20%), Positives = 194/494 (39%), Gaps = 57/494 (11%)
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
S+L++ SR+ + SV ++ + +D V ++ + + KAF + +
Sbjct: 239 SVLQAYCNSRKFDKALSVFNEI-YGRGWVDGHVLSILVLTFSKCGEVDKAFELIERM--- 294
Query: 149 CEDIGPEICNSLLAVL----ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
ED+G + VL +D AL++F +M G + I C +
Sbjct: 295 -EDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKE 353
Query: 205 LGQVLSMLDEVRK---RENSMINGSVIAVL----------------------------II 233
+ + L +L E+++ + I +IA ++
Sbjct: 354 IEKALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVL 413
Query: 234 HGFCKGKRVEEAFKVL---------DELRIRE-------CKPDFIAYRIVAEEFKLMGSV 277
+G GK V++A+ +L D + + +PD ++ IV + G +
Sbjct: 414 NGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKL 473
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ + ++G Y I L R+ E L + + F N++
Sbjct: 474 DLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSI 533
Query: 338 IGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
G + D A+ M G P + + L K LCKR +S E + +
Sbjct: 534 FGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGF 593
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ +Y+ + + +A + +++ +G PDV YN+L+ C+ + A
Sbjct: 594 LPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHD 653
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ D+M A G ++ TYN+LI + + G+I+ A M+ K P+ TYT+L++GLC
Sbjct: 654 ILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLC 713
Query: 517 QETNLQAAFEVFNK 530
A ++N+
Sbjct: 714 NAGRPDDAIHLWNE 727
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 126/302 (41%), Gaps = 20/302 (6%)
Query: 82 HSPLSYHSILKSLSLSRQINAIDSV--LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
H P H L L ++ + ++ L ++ D Y I ++ K +A
Sbjct: 558 HEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQAL 617
Query: 140 SVFNEV--KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIW 197
+F ++ + C D+ N+L+ + A + DEM +G+ S + + + I
Sbjct: 618 EIFRDICARGYCPDVVAY--NTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLID 675
Query: 198 KFCENAKLGQVLSMLDEV--RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
+C+N + Q L + ++RE ++I + + I G C R ++A + +E+R +
Sbjct: 676 GWCKNGDIDQAFHCLSRMVGKEREPNVITYTTL----IDGLCNAGRPDDAIHLWNEMRGK 731
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV--APRTNDYREFILGLIVERRIC 313
C P+ I++ + G + L R++G P T Y I I +
Sbjct: 732 GCSPNRISFIALIHGLCKCGW---PDAALLYFREMGERETPDTIVYVALITSFISNKNPT 788
Query: 314 EAKE-LGEVIVSGKFT--IDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
A E L E++ GKF +D + L + + S +I +GR+PT+ LS+
Sbjct: 789 LAFEILKEMVAKGKFPDPLDKNDLPLRDAILELAEDASTSSNVKNLIAEGRIPTIVCLSD 848
Query: 371 LS 372
+
Sbjct: 849 VG 850
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
V++ ++ N Y S+N ++ + SG + ++EM G +PD S+++A
Sbjct: 189 VKMMRLCVPNSY-----SFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQA 243
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C A ++++++ G +IL+ FS+ GE++ A L M + G+ +
Sbjct: 244 YCNSRKFDKALSVFNEIYGRGWVDG-HVLSILVLTFSKCGEVDKAFELIERMEDLGIRLN 302
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
T+ L+ G +++ + A ++F K S+ + LC +
Sbjct: 303 EKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAK 351
>gi|359495078|ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
[Vitis vinifera]
Length = 1294
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 123/590 (20%), Positives = 254/590 (43%), Gaps = 59/590 (10%)
Query: 8 DLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLA 67
D+A +S + R R W P + L++L ++P LVA V+ + T +
Sbjct: 620 DIAKNLSPIARYICDSFRKHRNWGPPVVADLNKL---RRVTPVLVAEVLK--VQTDPVIC 674
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
FF+WA +Q + H+ SY++ L+ S Q A D V + + + + +I
Sbjct: 675 SKFFHWAGKQKGYKHNFASYNAFAYCLNRSNQFRAADQVPELMNMQGKPPSEKQFEILIR 734
Query: 128 SLIQGKNTQKAFSVFNEVK-FNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRG 184
I + + V+ ++K F I P + N ++ L G++D A+ ++++ G
Sbjct: 735 MHIDANRGLRVYYVYEKMKKFG---IKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDG 791
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGFCKGKRVE 243
+ ++ + + + C+ ++ +VL + +E+RK + + V+A ++ C G RV
Sbjct: 792 LVEESVTYMILVKGLCKAGRIDEVLEVWEEMRKDK---VEPDVMAYTTLVAALCNGNRVG 848
Query: 244 EAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFI 303
E F++ E++ ++ D Y + E F + V +LK G Y I
Sbjct: 849 EGFELFKEMKQKKYLIDRAIYGSLIEGFVVNERVGSACDLLKDLMDSGYRADLAIYNSLI 908
Query: 304 LGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVP 363
G+ +++ +A +L +V V + + ++ S + + ++K P
Sbjct: 909 EGMCNVKQVDKAYKLFQVTVHESLEPNFLTVKPMLVSYAEMKRMDDFCSLLGQMQKLGFP 968
Query: 364 TLSTLSNLSKNLCKRNKSDEL-VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
+ LS + ++ + +L +EV++ L A Y + + YN+++ + +G +++A +
Sbjct: 969 VIDDLSKFFSVMIEKGERLKLALEVFEHLKAKGYCS-ISIYNILMEAIHRTGEVKKALSL 1027
Query: 423 IQEMKRKGLDPDVSFY--------------------NSLMEAC---------------CR 447
++K PD S Y N ++E C C+
Sbjct: 1028 FDDIKDSNFKPDSSTYSNAIICFVEVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLCK 1087
Query: 448 EDLLRPAKKLWDQMFASGCSGNLK-TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ + A L A+ SG ++ Y + I + G E + + + M+++G PD
Sbjct: 1088 SEEIDAAIMLVRDCLANVTSGPMEFKYTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEV 1147
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
TY++L+ G+C+ L+ A +VF+ M R +L+ + + +LI
Sbjct: 1148 TYSALISGMCKHGTLEEARKVFSN------MRERKLLTEANVIVYDEILI 1191
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,871,324,502
Number of Sequences: 23463169
Number of extensions: 314758083
Number of successful extensions: 918729
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7099
Number of HSP's successfully gapped in prelim test: 3597
Number of HSP's that attempted gapping in prelim test: 773537
Number of HSP's gapped (non-prelim): 72054
length of query: 556
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 408
effective length of database: 8,886,646,355
effective search space: 3625751712840
effective search space used: 3625751712840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)