BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008727
(556 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FMU2|PP380_ARATH Pentatricopeptide repeat-containing protein At5g14080
OS=Arabidopsis thaliana GN=At5g14080 PE=2 SV=2
Length = 634
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/550 (56%), Positives = 426/550 (77%), Gaps = 2/550 (0%)
Query: 3 MRPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLT 62
MRPAT+LA RI + ++ S +R AR W+PL+EQ+LH LG R S+SPSLVARVI+P+LL
Sbjct: 1 MRPATELAVRIGRELLKVSGSSRAARIWSPLIEQSLHGLGFRHSISPSLVARVIDPFLLN 60
Query: 63 HHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVY 122
HHSLALGFFNWA+QQP ++H +SYHSI KSLSLSRQ +A+D++ KQVK NKI LDSSVY
Sbjct: 61 HHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVY 120
Query: 123 RFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSH 182
R +I +L+ G+ Q AF V E ++I P++CN LLA L SDG D A K+F +M H
Sbjct: 121 RSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRH 180
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRV 242
+GV +T+GFGV+I FC +++ Q+L ++DEV+K N INGS+IA+LI+H CK R
Sbjct: 181 KGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKK-ANLNINGSIIALLILHSLCKCSRE 239
Query: 243 EEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
+AF +L+ELR +CKPDF+AYR++AE F + G+++ER+VVLKKKRKLGVAPR++DYR F
Sbjct: 240 MDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAF 299
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRV 362
IL LI +R+ EAKE+ EVIVSGKF +D+D+L+ALIGSVS++DP SA+ F +M+ G++
Sbjct: 300 ILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKL 359
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P + TLS LSKNLC+ +KSD L++ Y++LS+ YF++++SY++M+SFLC +GR+RE+Y
Sbjct: 360 PAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTA 419
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+QEMK++GL PDVS YN+L+EACC+ +++RPAKKLWD+MF GC NL TYN+LI K SE
Sbjct: 420 LQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSE 479
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD-VMLARS 541
GE E +LRLF MLE+G+ PD T Y SL+EGLC+ET ++AA EVF K + D + R
Sbjct: 480 EGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRR 539
Query: 542 ILSTFMISLC 551
+LS F+++LC
Sbjct: 540 VLSEFVLNLC 549
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 228/469 (48%), Gaps = 5/469 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++ L +++ S+L ++ ++LD+ Y +I L++G+N A + +E+
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ +I P + + + V++ +G ++ A +FD M G+ + I +C +
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
Q +L E++KR N +I+ ++ G C ++ A+ ++ E+ C+P+ + Y
Sbjct: 399 RQGYELLVEMKKR-NIVISPYTYGT-VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 266 IVAEEFKLMGSVFEREV-VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + F L S F + VLK+ ++ G+AP Y I+GL +R+ EA+ +V
Sbjct: 457 TLIKTF-LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ A I G + + + SA + M E G +P + L CK+ K E
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
Y+ + D ++Y V+++ L + ++ +A + +EM+ KG+ PDV Y L+
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+ ++ A ++D+M G + N+ YN+L+ F GEIE A L M KG+ P
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+A TY ++++G C+ +L AF +F++ ++ + +T + CR
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 112/497 (22%), Positives = 198/497 (39%), Gaps = 78/497 (15%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ N SP +Y +++K + S ++ +++K++ + + +Y +I + +Q
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRF 468
Query: 136 QKAFSVFNEVKFNCEDIGPEI-C-NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
A V E+K + I P+I C NSL+ L+ +D A EM G++ + +G
Sbjct: 469 GDAMRVLKEMKE--QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
FI + E ++ + E+R E ++ V+ +I+ +CK +V EA +
Sbjct: 527 AFISGYIEASEFASADKYVKEMR--ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV 584
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
+ D Y ++ V + E + ++ R G+AP Y I G
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF------- 637
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+LG + + A F+ M+E+G P + + L
Sbjct: 638 --SKLGNM-------------------------QKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
C+ + ++ E+ +S + +Y ++ C SG L EA+ + EMK KGL P
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 434 DVSFYNSLMEACCREDLLRPA--------------------------------------K 455
D Y +L++ CCR + + A
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLN 790
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+L D F N TYNI+I + G +E A LFH M + P TYTSLL G
Sbjct: 791 RLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850
Query: 516 CQETNLQAAFEVFNKSV 532
+ F VF++++
Sbjct: 851 DKMGRRAEMFPVFDEAI 867
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 176/410 (42%), Gaps = 42/410 (10%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS--LLAVLASDGYIDNALK 175
D+ Y ++ L + A +F E++ + I P++ + L+ + G + A
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMR--GKGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+FDEM G+ + I + + + FC + ++ + +LDE+ + + +V II G
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK--GLHPNAVTYCTIIDG 706
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
+CK + EAF++ DE++++ PD Y + + + V ER + + K G A
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV-ERAITIFGTNKKGCASS 765
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNF 355
T + I V GK + +VLN L+ + V +N
Sbjct: 766 TAPFNALI---------------NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
MI+ LCK + E++ + + + +Y +++ GR
Sbjct: 811 MIDY---------------LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGR 855
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA-----SGCSGNL 470
E + V E G++PD Y+ ++ A +E + A L DQMFA GC ++
Sbjct: 856 RAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSI 915
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
T L+S F++VGE+E A ++ NM+ PD+ T L+ C +N
Sbjct: 916 STCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 123/565 (21%), Positives = 222/565 (39%), Gaps = 90/565 (15%)
Query: 36 QTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQP-------NFTHSPL--- 85
TL L ++P +V V+ + S L FFNW Q +F+ L
Sbjct: 49 DTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLC 108
Query: 86 SYHSILKSLSLSRQI--------NAIDSVLK--QVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ S K+LS+ ++ S+++ Q V K + D ++ + I
Sbjct: 109 NFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGK-SDDGVLFGILFDGYIAKGYI 167
Query: 136 QKAFSVFNEVKFNCEDIGPEI------CNSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
++A VF+ +G E+ C LL L +D ++ M R V F
Sbjct: 168 EEAVFVFSS------SMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDV 221
Query: 190 IGFGVFIWKFCE--NAKLGQVLSM------------LDEVRKRENSMINGSVIAV----- 230
+ + I C N +LG+ + +D K + SMI ++ +
Sbjct: 222 KTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYD 281
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I G CK KR+E+A +L E+ L
Sbjct: 282 VLIDGLCKIKRLEDAKSLLVEMD-----------------------------------SL 306
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSA 349
GV+ + Y I GL+ R AK L +VS I + + I +S A
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F+ MI G +P ++L + C+ + E+ + + +Y +V
Sbjct: 367 KALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
+C+SG L AY +++EM G P+V Y +L++ + A ++ +M G + +
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+ YN LI S+ ++ A M+E G+ P+A TY + + G + + +A + +
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA-DKYV 545
Query: 530 KSVNHDVMLARSILSTFMIS-LCRR 553
K + +L +L T +I+ C++
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKK 570
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 105/268 (39%), Gaps = 40/268 (14%)
Query: 53 ARVINPYLLTHHSLALGFFNWASQQP-----------NFTHSPLSYHSILKSLSLSRQIN 101
+ I P + ++ L GF + Q T + + Y+ +L S +I
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLL 161
+L ++ V + ++ Y II + + +AF +F+E+K + + P+ S +
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL--KGLVPD---SFV 734
Query: 162 AVLASDGY-----IDNALKMFDEMSHRGVEFSTIGFGVFI-WKFCENAKLGQVLSMLDEV 215
DG ++ A+ +F + +G ST F I W F K G+ + EV
Sbjct: 735 YTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVF----KFGKT-ELKTEV 788
Query: 216 RKRENSMINGS---------VIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
R +++GS V ++I CK +E A ++ +++ P I Y
Sbjct: 789 LNR---LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAP 294
+ + MG E V + G+ P
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEP 873
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 143/571 (25%), Positives = 249/571 (43%), Gaps = 44/571 (7%)
Query: 24 TRPARKWTPLLEQTLHQLGLRDS---LSPSLVARVINPYLLTHHSLALGFFNWASQQPNF 80
T A +W LL + LR+S ++P + +++ L + S ++ F+W Q +
Sbjct: 51 TDSANEWEKLL-KPFDLDSLRNSFHKITPFQLYKLLE--LPLNVSTSMELFSWTGSQNGY 107
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
HS Y ++ L + + ID +L Q+K I S++ I+ + +
Sbjct: 108 RHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTR 167
Query: 141 VFNEVK--FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
+ E++ ++CE N +L +L S A +F +M R + + FGV +
Sbjct: 168 LMLEMRNVYSCEPTFKSY-NVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKA 226
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
FC ++ LS+L ++ K + + SVI +IH K RV EA ++L+E+ + C
Sbjct: 227 FCAVNEIDSALSLLRDMTK--HGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 284
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
PD + V + E ++ + G AP Y + GL R+ AK+L
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 319 ------GEVIV----------SGKFTIDDDVLNALI---GSVSSIDPRSAIVF------- 352
E+++ G+ VL+ ++ G V + +++++
Sbjct: 345 FYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 353 -------FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
+ M KG P + + + L CK K DE V +SA+ + +N
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++S C R+ EA + +EM RKG PDV +NSL+ C D ++ A L M + G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
N TYN LI+ F GEI+ A +L + M+ +G D TY SL++GLC+ + A
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 526 EVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+F K + + + + LCR ++
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMV 615
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 112/498 (22%), Positives = 208/498 (41%), Gaps = 64/498 (12%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++ ++K+ +I++ S+L+ + + +S +Y+ +I SL + +A + E
Sbjct: 218 FTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEE 277
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ E N ++ L I+ A KM + M RG I +G + C+ +
Sbjct: 278 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR 337
Query: 205 LGQVLSMLDEVRKRE----NSMINGSVI--------AVL------------------IIH 234
+ + + K E N++I+G V AVL +I+
Sbjct: 338 VDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 235 GFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAP 294
G+ K V A +VL ++R + CKP+ +Y I+ + F +G + E VL + G+ P
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 295 RTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFN 354
T + I E RI EA E+ F
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEI----------------------------------FR 483
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M KG P + T ++L LC+ ++ + + + + + + +YN +++ G
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
++EA ++ EM +G D YNSL++ CR + A+ L+++M G + + + N
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
ILI+ G +E A+ M+ +G PD T+ SL+ GLC+ ++ +F K
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663
Query: 535 DVMLARSILSTFMISLCR 552
+ +T M LC+
Sbjct: 664 GIPPDTVTFNTLMSWLCK 681
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 235/498 (47%), Gaps = 19/498 (3%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
S AL FN AS++PNF+ P Y IL L S + + +L+ +K ++ + +S +
Sbjct: 64 SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLI 123
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PE--ICNSLLAVLASDGYIDNALKMFD-- 178
+I S Q + + SV V + ++ G P+ N +L +L DG N+LK+ +
Sbjct: 124 LIESYAQFELQDEILSV---VDWMIDEFGLKPDTHFYNRMLNLLV-DG---NSLKLVEIS 176
Query: 179 --EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
+MS G++ F V I C +L + ML+++ ++ ++ G+
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSY--GLVPDEKTFTTVMQGY 234
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER-EVVLKKKRKLGVAPR 295
+ ++ A ++ +++ C ++ ++ F G V + + + + G P
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPRSAIVFFN 354
+ + GL + A E+ +V++ + D N++I + + + + A+ +
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
MI + P T + L LCK N+ +E E+ +VL++ D+ ++N ++ LC +
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
R A + +EM+ KG +PD YN L+++ C + L A + QM SGC+ ++ TYN
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
LI F + + A +F M GV+ ++ TY +L++GLC+ ++ A ++ ++ +
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 535 DVMLARSILSTFMISLCR 552
+ ++ + CR
Sbjct: 535 GQKPDKYTYNSLLTHFCR 552
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 200/458 (43%), Gaps = 2/458 (0%)
Query: 68 LGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
L +W + Y+ +L L + ++ ++ V I D S + +I
Sbjct: 138 LSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIK 197
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF 187
+L + + A + ++ + +++ +G +D AL++ ++M G +
Sbjct: 198 ALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSW 257
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
S + V + FC+ ++ L+ + E+ ++ + L+ +G CK V+ A +
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV-NGLCKAGHVKHAIE 316
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
++D + PD Y V +G V E VL + +P T Y I L
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC 376
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
E ++ EA EL V+ S D N+LI G + + R A+ F M KG P
Sbjct: 377 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T + L +LC + K DE + + K + + + +YN ++ C + + REA + EM
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
+ G+ + YN+L++ C+ + A +L DQM G + TYN L++ F G+I
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 556
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
+ A + M G PD TY +L+ GLC+ ++ A
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 132/320 (41%), Gaps = 40/320 (12%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y+ ++ SL +++ ++LKQ++++ Y +I + T++A +F+E
Sbjct: 436 FTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDE 495
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
++ + N+L+ L +++A ++ D+M G
Sbjct: 496 MEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG-------------------- 535
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAY 264
+K + N L+ H FC+G +++A ++ + C+PD + Y
Sbjct: 536 -----------QKPDKYTYNS-----LLTH-FCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ G V +L+ + G+ + Y I GL +R+ EA L ++
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638
Query: 325 GKFTIDDDVLNALI--GSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
D V ++ G + P R A+ F ++EKG VP S+L L++ L +
Sbjct: 639 QNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSME 698
Query: 382 DELVEVYKVLSANDYFTDME 401
+ LV++ ++ F++ E
Sbjct: 699 ETLVKLVNMVMQKARFSEEE 718
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 214/508 (42%), Gaps = 66/508 (12%)
Query: 50 SLVARVINPYLLTHHSLALGFFNWAS--------------QQPNFTHSPLSYHSILKSLS 95
++V + NP ++ L GFF + QP+ +Y++++
Sbjct: 114 TMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDV----FAYNALINGFC 169
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGP 154
+I+ VL +++ + D+ Y +I SL A V N++ NC+ P
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ---P 226
Query: 155 EICNSLLAVLAS--DGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSML 212
+ + + A+ +G +D ALK+ DEM RG++ +
Sbjct: 227 TVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT------------------ 268
Query: 213 DEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFK 272
II G CK V+ AF+++ L ++ C+PD I+Y I+
Sbjct: 269 -------------------IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALL 309
Query: 273 LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDD 332
G E E ++ K P Y I L + +I EA L +++ T D
Sbjct: 310 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 369
Query: 333 VLNALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYK 389
+ LI + +D AI F MI G +P + + + LCK K+D+ +E++
Sbjct: 370 SYDPLIAAFCREGRLD--VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFG 427
Query: 390 VLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRED 449
L + SYN M S L +SG A +I EM G+DPD YNS++ CRE
Sbjct: 428 KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487
Query: 450 LLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYT 509
++ A +L M + ++ TYNI++ F + IE A+ + +M+ G P+ TTYT
Sbjct: 488 MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547
Query: 510 SLLEGLCQETNLQAAFEVFNKSVNHDVM 537
L+EG+ A E+ N V D +
Sbjct: 548 VLIEGIGFAGYRAEAMELANDLVRIDAI 575
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 149/322 (46%), Gaps = 2/322 (0%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
I H C+ E+ +L+ + + PD I + + F + ++ + V++ K G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AI 350
P Y I G RI +A + + + S F+ D N +IGS+ S A+
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
N ++ PT+ T + L + DE +++ + + DM +YN ++ +
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C G + A+ +++ ++ KG +PDV YN L+ A + +KL +MF+ C N+
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TY+ILI+ G+IE A+ L M EKG+ PDA +Y L+ C+E L A E
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 531 SVNHDVMLARSILSTFMISLCR 552
++ + +T + +LC+
Sbjct: 394 MISDGCLPDIVNYNTVLATLCK 415
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 168/337 (49%), Gaps = 23/337 (6%)
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER---EVVLKKKR 288
+I+GFCK R+++A +VLD +R ++ PD + Y I ++GS+ R ++ LK
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI------MIGSLCSRGKLDLALKVLN 217
Query: 289 KL---GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV--SS 343
+L P Y I ++E + EA +L + ++S D N +I +
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
+ R+ + N + KG P + + + L + L + K +E ++ + + ++ +Y
Sbjct: 278 MVDRAFEMVRNLEL-KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
+++++ LC G++ EA +++ MK KGL PD Y+ L+ A CRE L A + + M +
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN--- 520
GC ++ YN +++ + G+ + AL +F + E G +P++++Y ++ L +
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 521 -LQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
L E+ + ++ D + S++S LCR ++
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISC----LCREGMV 489
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 67/134 (50%)
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
+ E+ K PDV YN+L+ C+ + + A ++ D+M + S + TYNI+I
Sbjct: 146 VMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
G+++ AL++ + +L P TYT L+E E + A ++ ++ ++ +
Sbjct: 206 RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265
Query: 543 LSTFMISLCRRVLI 556
+T + +C+ ++
Sbjct: 266 YNTIIRGMCKEGMV 279
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/367 (17%), Positives = 151/367 (41%), Gaps = 17/367 (4%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
N + ++Y ++++ L ++ ++ ++ + D Y II + + +A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 139 FSVFNEVKF-NCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
F + ++ CE P++ N LL L + G + K+ +M + + + + +
Sbjct: 283 FEMVRNLELKGCE---PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR 255
I C + K+ + +++L ++ E + + +I FC+ R++ A + L+ +
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMK--EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
C PD + Y V G + + K ++G +P ++ Y L A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 316 KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV--FFNFMIEKGRV---PTLSTLSN 370
+ ++S D+ N++I + R +V F +++ P++ T +
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLC----REGMVDEAFELLVDMRSCEFHPSVVTYNI 513
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
+ CK ++ ++ + V + + N + +Y V++ + +G EA + ++ R
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRID 573
Query: 431 LDPDVSF 437
+ SF
Sbjct: 574 AISEYSF 580
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 220/493 (44%), Gaps = 21/493 (4%)
Query: 64 HSLALGFFNWASQQPNFT--HSPLSYHSILK-SLSLSRQINAIDSVLKQVKVNKITL--- 117
+L L F NWA+ FT ++ H + K L + QI A D K + +L
Sbjct: 62 QALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFK 121
Query: 118 -----------DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLL-AVLA 165
SSV+ ++ S + KA S+ + + + G N++L A +
Sbjct: 122 SLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIR 181
Query: 166 SDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMING 225
S I A +F EM V + + + I FC + L++ D++ + +
Sbjct: 182 SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETK--GCLPN 239
Query: 226 SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLK 285
V +I G+CK +++++ FK+L + ++ +P+ I+Y +V G + E VL
Sbjct: 240 VVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLT 299
Query: 286 KKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI- 344
+ + G + Y I G E +A + ++ T +LI S+
Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 359
Query: 345 DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYN 404
+ A+ F + M +G P T + L ++ +E V + ++ N + + +YN
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 405 VMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
+++ C +G++ +A V+++MK KGL PDV Y++++ CR + A ++ +M
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
G + TY+ LI F E + A L+ ML G+ PD TYT+L+ C E +L+ A
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 525 FEVFNKSVNHDVM 537
++ N+ V V+
Sbjct: 540 LQLHNEMVEKGVL 552
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 124/521 (23%), Positives = 225/521 (43%), Gaps = 64/521 (12%)
Query: 75 SQQPNFTHSPLSYHSILKSLSLS-RQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
+Q F LSY+++L + S R I+ ++V K++ ++++ + Y +I
Sbjct: 160 AQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAG 219
Query: 134 NTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGY-----IDNALKMFDEMSHRGVE 186
N A ++F+ K + P + N+L+ DGY ID+ K+ M+ +G+E
Sbjct: 220 NIDVALTLFD--KMETKGCLPNVVTYNTLI-----DGYCKLRKIDDGFKLLRSMALKGLE 272
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE--------NSMING------------- 225
+ I + V I C ++ +V +L E+ +R N++I G
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 226 -----------SVIAVL-IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
SVI +IH CK + A + LD++R+R P+ Y + + F
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD-D 332
G + E VL++ G +P Y I G V ++ +A + E + + D
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
L G S D A+ M+EKG P T S+L + C++ ++ E ++Y+ +
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
D +Y +++ C G L +A + EM KG+ PDV Y+ L+ ++ R
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEV---------------GEIEGALRLFHNML 497
AK+L ++F + TY+ LI S + G + A ++F +ML
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESML 632
Query: 498 EKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
K PD T Y ++ G C+ +++ A+ ++ + V +L
Sbjct: 633 GKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLL 673
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 76/151 (50%)
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN+++ C +G + A + +M+ KG P+V YN+L++ C+ + KL M
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G NL +YN++I+ G ++ + M +G + D TY +L++G C+E N
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A + + + H + + ++ + S+C+
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCK 357
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/505 (22%), Positives = 223/505 (44%), Gaps = 34/505 (6%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINA 102
R+ LS SLV V+ L+ S + FF WA +Q + H+ Y++++ +
Sbjct: 126 FREKLSESLVIEVLR--LIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKV 183
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDI----GPEICN 158
+ L+Q++ + D V+ + L++ +FS+ E +D N
Sbjct: 184 PEEFLQQIRDD----DKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYN 239
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR 218
L+ +D+A + EMS + F + C+ K + L++++
Sbjct: 240 CLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET---- 295
Query: 219 ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+ + +V +I G C+ EEA L+ +R C P+ + Y + L G +
Sbjct: 296 -ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTL-----LCGCLN 349
Query: 279 EREV-----VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
++++ VL G P + + A +L + +V V
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409
Query: 334 LNALIGSVSSIDPRS--------AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
N LIGS+ D S A ++ M+ G V +S+ ++ LC K ++
Sbjct: 410 YNILIGSICG-DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
V + + + D +Y+ ++++LC + ++ A+ + +EMKR GL DV Y ++++
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+ L+ A+K +++M GC+ N+ TY LI + + ++ A LF ML +G P+
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNK 530
TY++L++G C+ ++ A ++F +
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFER 613
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 155/385 (40%), Gaps = 21/385 (5%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
+S L S G + A + EM +G T + + C +K+ + +E+++
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
++ +++ FCK +E+A K +E+R C P+ + Y + + V
Sbjct: 512 --GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 569
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLI----VER------RICEAKELGEVIVSGKF 327
+ + G P Y I G VE+ R+C +K++ +V + K
Sbjct: 570 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK- 628
Query: 328 TIDDD-------VLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
DD+ AL+ G S A + M +G P L LCK
Sbjct: 629 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K DE EV +S + + + +Y+ ++ R A V+ +M P+V Y
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+++ C+ A KL M GC N+ TY +I F +G+IE L L M K
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Query: 500 GVAPDATTYTSLLEGLCQETNLQAA 524
GVAP+ TY L++ C+ L A
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVA 833
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/476 (20%), Positives = 202/476 (42%), Gaps = 33/476 (6%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y +L L + ++ + +++K + D Y ++ S + ++A FNE+
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 146 KFNCEDIG--PEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
+ ++G P + +L+ + A ++F+ M G + + + I C+
Sbjct: 545 R----EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 202 NAKLGQVLSMLDEV--------------RKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
++ + + + + + +NS V ++ GFCK RVEEA K
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
+LD + + C+P+ I Y + + +G + E + V + + G Y I
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Query: 308 -VERRICEAKELGEVI---VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVP 363
V+R+ +K L +++ + I ++++ L V D A M EKG P
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC-KVGKTD--EAYKLMQMMEEKGCQP 777
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ T + + K + +E+ + + + + +Y V++ C +G L A+ ++
Sbjct: 778 NVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLL 837
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEV 483
+EMK+ + Y ++E +E + + L D++ + L Y +LI +
Sbjct: 838 EEMKQTHWPTHTAGYRKVIEGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKA 895
Query: 484 GEIEGALRLFHNM--LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+E ALRL + + ++TY SL+E LC ++ AF++F++ V+
Sbjct: 896 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVI 951
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 145/383 (37%), Gaps = 55/383 (14%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
+D A K + EM GV + I F C K + S++ E+ + I +
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ--GFIPDTSTY 486
Query: 230 VLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
+++ C ++E AF + +E++ D Y I+ + F G + + + R+
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSA 349
+G P Y I + +++ A EL
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANEL------------------------------- 575
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F M+ +G +P + T S L CK + ++ ++++ + + D++ Y
Sbjct: 576 ---FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY------ 626
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
++ P+V Y +L++ C+ + A+KL D M GC N
Sbjct: 627 -------------FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
Y+ LI +VG+++ A + M E G TY+SL++ + A +V +
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733
Query: 530 KSVNHDVMLARSILSTFMISLCR 552
K + + I + + LC+
Sbjct: 734 KMLENSCAPNVVIYTEMIDGLCK 756
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 158/378 (41%), Gaps = 17/378 (4%)
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
I + + S+ + +D KQ N + Y ++ + ++A + + +
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+ + ++L+ L G +D A ++ EMS G + + I ++ + +
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+L ++ ENS VI +I G CK + +EA+K++ + + C+P+ + Y + +
Sbjct: 730 KVLSKML--ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
F ++G + +L++ GVAP YR I + A L E + +
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 847
Query: 330 DDDVLNALIGSVSSIDPRSAIVFFNFMIEKGR---VPTLSTLSNLSKNLCKRNKSD---E 383
+I + + I + E G+ P LS L NL K + +
Sbjct: 848 HTAGYRKVIEGFN----KEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALR 903
Query: 384 LVEVYKVLSAN--DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
L+E SA DY + +YN ++ LC + ++ A+ + EM +KG+ P++ + SL
Sbjct: 904 LLEEVATFSATLVDYSS---TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSL 960
Query: 442 MEACCREDLLRPAKKLWD 459
++ R + A L D
Sbjct: 961 IKGLFRNSKISEALLLLD 978
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 3/189 (1%)
Query: 363 PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGV 422
P+ ST + L + K ++ D +++ +S + D + LC G+ REA +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 423 IQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSE 482
++ + PD FY L+ C L A ++M A+ C N+ TY+ L+
Sbjct: 293 VET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
++ R+ + M+ +G P + SL+ C + A+++ K V M +
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409
Query: 543 LSTFMISLC 551
+ + S+C
Sbjct: 410 YNILIGSIC 418
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 79/226 (34%), Gaps = 44/226 (19%)
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
TL + +LCK K E + ++ ++ D Y ++S LC + EA + M
Sbjct: 272 TLRCFAYSLCKVGKWREAL---TLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRM 328
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
+ P+V Y++L+ C + L K++ + M GC + K +N L+ + G+
Sbjct: 329 RATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDH 388
Query: 487 EGALRL-----------------------------------------FHNMLEKGVAPDA 505
A +L + ML GV +
Sbjct: 389 SYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNK 448
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
+S LC + AF V + + + S S + LC
Sbjct: 449 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/471 (23%), Positives = 226/471 (47%), Gaps = 16/471 (3%)
Query: 70 FFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKV-NKITLDSSVYRFIIPS 128
F A + +F + S+++S + S ++++ +L ++++ N++ ++ S FI+
Sbjct: 63 MFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERS---FIVVF 119
Query: 129 LIQGKN--TQKAFSVFNEV--KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
GK KA +F+ + +F C+ NS+L V+ ++G L+ +D + +
Sbjct: 120 RAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSF-NSVLNVIINEGLYHRGLEFYDYVVNSN 178
Query: 185 VEFST----IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
+ + + F + I C+ + + + + + +R+ + +G L+ G CK +
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERK-CLPDGYTYCTLM-DGLCKEE 236
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
R++EA +LDE++ C P + Y ++ + G + ++ G P Y
Sbjct: 237 RIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYN 296
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEK 359
I GL ++ ++ +A L E +VS K +D LI G V A+ + M E+
Sbjct: 297 TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G S L L K K++E + +++ ++ ++ Y+V+V LC G+ EA
Sbjct: 357 GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEA 416
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
++ M G P+ Y+SLM+ + L A ++W +M +GCS N Y++LI
Sbjct: 417 KEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDG 476
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
VG ++ A+ ++ ML G+ PD Y+S+++GLC ++ AA +++++
Sbjct: 477 LCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHE 527
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 181/414 (43%), Gaps = 28/414 (6%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEV-KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
+ +I +L + + +A VF + + C G C +L+ L + ID A+ + DEM
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYC-TLMDGLCKEERIDEAVLLLDEM 248
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
G S + + V I C+ L +V ++D + + + V +IHG C
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK--GCVPNEVTYNTLIHGLCLKG 306
Query: 241 RVEEAFKVLDELRIRECKPDFIAY----------RIVAEEFKLMGSVFEREVVLKKKRKL 290
++++A +L+ + +C P+ + Y R + +L+ S+ ER
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER---------- 356
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G + Y I GL E + EA L + + V + L+ G P A
Sbjct: 357 GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEA 416
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
N MI G +P T S+L K K +E V+V+K + + Y+V++
Sbjct: 417 KEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDG 476
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFAS---GC 466
LC GR++EA V +M G+ PD Y+S+++ C + A KL+ +M
Sbjct: 477 LCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKS 536
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETN 520
++ TYNIL+ +I A+ L ++ML++G PD T + L L +++N
Sbjct: 537 QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN 590
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 94/234 (40%), Gaps = 35/234 (14%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F M E+ +P T L LCK + DE V + + + YNV++
Sbjct: 206 AIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC G L ++ M KG P+ YN+L+ C + L A L ++M +S C
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIP 325
Query: 469 NLKT-----------------------------------YNILISKFSEVGEIEGALRLF 493
N T Y++LIS + G+ E A+ L+
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLW 385
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
M EKG P+ Y+ L++GLC+E A E+ N+ + + S+ M
Sbjct: 386 RKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK----TYNILISKFSEVGEIEGAL 490
V +NS++ E L + +D + S + N+ ++N++I ++ ++ A+
Sbjct: 148 VKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAI 207
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
+F M E+ PD TY +L++GLC+E + A + ++ + + I + + L
Sbjct: 208 EVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGL 267
Query: 551 CRR 553
C++
Sbjct: 268 CKK 270
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/502 (22%), Positives = 234/502 (46%), Gaps = 38/502 (7%)
Query: 78 PNFTHSPLSY----HSILKSLSLSRQINAIDSVLKQVKVNKI----TLDS---------S 120
PNF H+ LS H +++S LS + + ++++ V+++ +LDS S
Sbjct: 107 PNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDS 166
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
V+ +I + +Q + ++A F ++ + + CN+L+ L G+++ A ++ E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
S GV + + + C++ K+ +V + L +V+ E + V +I +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ--EKGVYPDIVTYNTLISAYSSKG 284
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+EEAF++++ + + P Y V G + V + + G++P + YR
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTID---DDVLNALI--GSVSSIDPRS-----AI 350
++ EA + G+V+ + K D DV+ L+ S+ S+ RS A+
Sbjct: 345 SLLM---------EACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
++FN + E G +P + L + C++ + + + D+ +YN ++ L
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C L EA + EM + L PD L++ C+ L+ A +L+ +M ++
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
TYN L+ F +VG+I+ A ++ +M+ K + P +Y+ L+ LC + +L AF V+++
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 531 SVNHDVMLARSILSTFMISLCR 552
++ ++ I ++ + CR
Sbjct: 576 MISKNIKPTVMICNSMIKGYCR 597
Score = 115 bits (289), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/465 (20%), Positives = 216/465 (46%), Gaps = 20/465 (4%)
Query: 56 INPYLLTHHSLALGF---------FNWASQQPNFTHSP--LSYHSILKSLSLSRQINAID 104
+ P ++T+++L + F + P SP +Y++++ L +
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK 325
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE-IC-NSLLA 162
V ++ + ++ DS+ YR ++ + + + VF++++ D+ P+ +C +S+++
Sbjct: 326 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR--SRDVVPDLVCFSSMMS 383
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSM 222
+ G +D AL F+ + G+ + + + I +C + +++ +E+ ++ +M
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 223 INGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
V I+HG CK K + EA K+ +E+ R PD I+ + +G++
Sbjct: 444 --DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+ +K ++ + Y + G I AKE+ +VS + + L+ ++
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 343 SIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
S + A ++ MI K PT+ +++ K C+ + + + + + + D
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRK--GLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
SYN ++ + +A+G++++M+ + GL PDV YNS++ CR++ ++ A+ +
Sbjct: 622 SYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 681
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
+M G + + TY +I+ F + A R+ ML++G +PD
Sbjct: 682 KMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 128/284 (45%), Gaps = 38/284 (13%)
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSID------------PRSAI------- 350
R++ EA E ++ S FT+ D NALIGS+ I RS +
Sbjct: 179 RKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTL 238
Query: 351 -----------------VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
F + + EKG P + T + L + +E E+ +
Sbjct: 239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG 298
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS-LMEACCREDLLR 452
+ + +YN +++ LC G+ A V EM R GL PD + Y S LMEAC + D++
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE 358
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
+K++ M + +L ++ ++S F+ G ++ AL F+++ E G+ PD YT L+
Sbjct: 359 -TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 513 EGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+G C++ + A + N+ + + +T + LC+R ++
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%)
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L + + K E E + +L + + +++ N ++ L G + A+GV QE+ R G
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+ +V N ++ A C++ + Q+ G ++ TYN LIS +S G +E A
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
L + M KG +P TY +++ GLC+ + A EVF + + + + + ++
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 551 CRR 553
C++
Sbjct: 351 CKK 353
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/390 (18%), Positives = 146/390 (37%), Gaps = 40/390 (10%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y S+L + + V ++ + D + ++ + N KA FN V
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
K I L+ G I A+ + +EM +G + + + C+ L
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR 265
G+ + +E+ +R ++ S ++I G CK ++ A ++ +++ + + D + Y
Sbjct: 462 GEADKLFNEMTER--ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 266 IVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSG 325
+ + F +G + + + + P Y + L + + EA + + ++S
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK 579
Query: 326 KFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVP---TLSTL-------SNLSK- 373
+ N++I G S + F MI +G VP + +TL N+SK
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKA 639
Query: 374 --------------------------NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
C++N+ E V + + D +Y M+
Sbjct: 640 FGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMI 699
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
+ + L EA+ + EM ++G PD F
Sbjct: 700 NGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 205/473 (43%), Gaps = 45/473 (9%)
Query: 66 LALGFFNWASQ-QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
LAL F +A + P FTH+ +YHSIL LS +R + ++S++ ++ + + F
Sbjct: 64 LALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLF 123
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE----ICNSLLAVLASDGYIDNALKMFDEM 180
I L++ + + D G + N+LL VL + D MF
Sbjct: 124 I--DLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNS 181
Query: 181 SHR-GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
G+ + + + C+ + +LDE+ ++ V I+ G+
Sbjct: 182 KESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSM--GLVPNLVTYTTILGGYVAR 239
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
+E A +VL+E+ R PD Y ++ + + +G E V+ K + P
Sbjct: 240 GDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPN---- 295
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
E G+++ R +C+ K+ GE A F+ M+E+
Sbjct: 296 -EVTYGVMI-RALCKEKKSGE----------------------------ARNMFDEMLER 325
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
+P S + LC+ +K DE +++ + N+ D + ++ +LC GR+ EA
Sbjct: 326 SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEA 385
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ E + KG P + YN+L+ C + L A +LWD M+ C N TYN+LI
Sbjct: 386 RKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEG 444
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
S+ G ++ +R+ MLE G P+ TT+ L EGL + + A ++ + +V
Sbjct: 445 LSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAV 497
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 91/193 (47%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P + T + L K LCK+N + +V + + ++ +Y ++ G + A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
V++EM +G PD + Y LM+ C+ A + D M + N TY ++I
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ + A +F MLE+ PD++ +++ LC++ + A ++ K + ++ M
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 365
Query: 540 RSILSTFMISLCR 552
++LST + LC+
Sbjct: 366 NALLSTLIHWLCK 378
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 175/387 (45%), Gaps = 3/387 (0%)
Query: 168 GYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV 227
G +D K+ + M +G++ ++ +G I C KL + E+ ++ ++ +V
Sbjct: 295 GELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ--GILPDTV 352
Query: 228 IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
+ +I GFCK + A K E+ R+ PD + Y + F +G + E + +
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDP 346
G+ P + + E I G + +A + ++ + + LI G D
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
SA + M + G P + T +++ LCK +E V++ A D +Y +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ C SG + +A +++EM KGL P + +N LM C +L +KL + M A G
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ N T+N L+ ++ ++ A ++ +M +GV PD TY +L++G C+ N++ A+
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 527 VFNKSVNHDVMLARSILSTFMISLCRR 553
+F + ++ S S + +R
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKR 679
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/487 (21%), Positives = 202/487 (41%), Gaps = 48/487 (9%)
Query: 63 HHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVY 122
HH L L + +T +SY +++ +++ + +++ +K + +S +Y
Sbjct: 266 HHLLLL------MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 123 RFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEM 180
II L + +A F+E+ + I P+ + +L+ G I A K F EM
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIR--QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 377
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
R + + + I FC+ + + + E+ + + SV +I+G+CK
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK--GLEPDSVTFTELINGYCKAG 435
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+++AF+V + + C P+ + Y + + G + +L + K+G+ P Y
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 301 EFILGLIVERRICEA-KELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEK 359
+ GL I EA K +GE +G LNA
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAG--------LNA----------------------- 524
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
T + L CK + D+ E+ K + + ++NV+++ C G L +
Sbjct: 525 ----DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
++ M KG+ P+ + +NSL++ C + L+ A ++ M + G + KTY L+
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ ++ A LF M KG + +TY+ L++G + A EVF++ +
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Query: 540 RSILSTF 546
+ I F
Sbjct: 701 KEIFDFF 707
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 99/194 (51%)
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
KG P + + S + C+ + D++ ++ +V+ + Y ++ LC +L E
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A EM R+G+ PD Y +L++ C+ +R A K + +M + + ++ TY +IS
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
F ++G++ A +LFH M KG+ PD+ T+T L+ G C+ +++ AF V N +
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 539 ARSILSTFMISLCR 552
+T + LC+
Sbjct: 455 NVVTYTTLIDGLCK 468
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 108/219 (49%), Gaps = 2/219 (0%)
Query: 314 EAKELGEVIVSGKFTIDDDVLNALIGSVSS--IDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
EA+ + E +++ + D N + +S +AI+ F E G +++ + +
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
+C+ + E + ++ Y D+ SY+ +V+ C G L + + +I+ MKRKGL
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
P+ Y S++ CR L A++ + +M G + Y LI F + G+I A +
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
F+ M + + PD TYT+++ G CQ ++ A ++F++
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 347 RSAIVFFNFMIEKGRVPTLST----LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
R A F M+ G V ++ + L+ LSK+ K+ + V++ ++ S
Sbjct: 192 REARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC---YKTATAIIVFREFPEVGVCWNVAS 248
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN+++ F+C GR++EA+ ++ M+ KG PDV Y++++ CR L KL + M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G N Y +I + ++ A F M+ +G+ PD YT+L++G C+ +++
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 523 AA----FEVFNKSVNHDVMLARSILSTF 546
AA +E+ ++ + DV+ +I+S F
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGF 396
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 168/378 (44%), Gaps = 11/378 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSM----LD 213
N LL VL G + K+ D++ RGV + + +FI C+ +L + M ++
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279
Query: 214 EVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKL 273
+ K + N +I+G CK + +EA L ++ +PD Y + +
Sbjct: 280 QGPKPDVITYNN------LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333
Query: 274 MGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV 333
G V E ++ G P YR I GL E A L + + +
Sbjct: 334 GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL 393
Query: 334 LNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
N LI +S+ A N M EKG +P + T + L LCK + + KV+
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ YF D+ ++N+++ T ++ A ++ M G+DPDV YNSL+ C+
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
+ + M GC+ NL T+NIL+ +++ AL L M K V PDA T+ +L+
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 513 EGLCQETNLQAAFEVFNK 530
+G C+ +L A+ +F K
Sbjct: 574 DGFCKNGDLDGAYTLFRK 591
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 132/537 (24%), Positives = 226/537 (42%), Gaps = 67/537 (12%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKIT-LDSSVYRFI 125
AL FN ++ F H+ +Y S+++ L + A++ VL ++ N + VY
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGA 82
Query: 126 IPSLIQGKNTQKAFSVFNEVKF-NCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSH 182
+ + + Q+A +VF + F +CE P + N++++VL GY D A K++ M
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCE---PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRD 139
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA-VLIIHGF----- 236
RG+ F + + FC+ ++ L +L+ + + M +V+A ++ GF
Sbjct: 140 RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEM---NVVAYCTVVGGFYEENF 196
Query: 237 ------------------------------CKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
CK V+E K+LD++ R P+ Y +
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256
Query: 267 ----VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK-ELGEV 321
+ + +L G+V ++++ G P Y I GL + EA+ LG++
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQ----GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 322 IVSGKFTIDDDVLNALI------GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
+ G D N LI G V + FN G VP T +L L
Sbjct: 313 VNEG-LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFN-----GFVPDQFTYRSLIDGL 366
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C +++ + ++ ++ YN ++ L G + EA + EM KGL P+V
Sbjct: 367 CHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEV 426
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
+N L+ C+ + A L M + G ++ T+NILI +S ++E AL +
Sbjct: 427 QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDV 486
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
ML+ GV PD TY SLL GLC+ + + E + V + + SLCR
Sbjct: 487 MLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 195/429 (45%), Gaps = 35/429 (8%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK-------LGQVLS 210
N + L G +D A++M + +G + I + I+ C+N+K LG++++
Sbjct: 255 NLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVN 314
Query: 211 -MLDEVRKRENSMINGSVIAVLI-------------------------IHGFCKGKRVEE 244
L+ N++I G ++ I G C
Sbjct: 315 EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR 374
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFIL 304
A + +E + KP+ I Y + + G + E + + + G+ P + +
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVP 363
GL + +A L +V++S + D N LI G + + +A+ + M++ G P
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 364 TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVI 423
+ T ++L LCK +K ++++E YK + ++ ++N+++ LC +L EA G++
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554
Query: 424 QEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM-FASGCSGNLKTYNILISKFSE 482
+EMK K ++PD + +L++ C+ L A L+ +M A S + TYNI+I F+E
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTE 614
Query: 483 VGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSI 542
+ A +LF M+++ + PD TY +++G C+ N+ ++ + + + + + +
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTT 674
Query: 543 LSTFMISLC 551
L + LC
Sbjct: 675 LGRVINCLC 683
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 166/387 (42%), Gaps = 5/387 (1%)
Query: 173 ALKMFDEMSHR-GVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR-ENSMINGSVIAV 230
AL+MF+ M G + + + I K K + +L ++R+ N M+ G +
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGA 82
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+ +G KGK V+EA V + + +C+P +Y + G + V + R
Sbjct: 83 MKNYGR-KGK-VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR 140
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-A 349
G+ P + + R A L + S ++ ++G + ++
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
F M+ G LST + L + LCK+ E ++ + ++ +YN+ +
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
LC G L A ++ + +G PDV YN+L+ C+ + A+ +M G +
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
TYN LI+ + + G ++ A R+ + + G PD TY SL++GLC E A +FN
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380
Query: 530 KSVNHDVMLARSILSTFMISLCRRVLI 556
+++ + + +T + L + +I
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMI 407
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 174/375 (46%), Gaps = 5/375 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
++L+ L G + AL + D M G + + +G + + C K G LD RK
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC---KSGNSALALDLFRK 235
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E I SV+ ++I CK ++A + +E+ ++ K D + Y + G
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ +L++ + P + I + E ++ EAKEL +++ D N+
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G A F+ M+ KG P + T S L + CK + D+ + +++ +S+
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ +YN +V C SG+L A + QEM +G+ P V Y L++ C L A
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+++++M S + + YNI+I +++ A LF ++ +KGV PD TY ++ GL
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 535
Query: 516 CQETNLQAAFEVFNK 530
C++ +L A +F K
Sbjct: 536 CKKGSLSEADMLFRK 550
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 180/406 (44%), Gaps = 25/406 (6%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L + +A D L M G+E + I +C KL S+L K
Sbjct: 74 NRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWK 133
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E I S + ++GFC RV EA ++D + + +PD + + L G
Sbjct: 134 LGYEPDTITFSTL----VNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKG 189
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFI----------LGLIVERRICEAKELGEVIVSG 325
V E V++ + + G P Y + L L + R++ E + + +V
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM-EERNIKASVVQY 248
Query: 326 KFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
ID + S D A+ FN M KG + T S+L LC K D+
Sbjct: 249 SIVIDS------LCKDGSFD--DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
++ + + + D+ +++ ++ G+L EA + EM +G+ PD YNSL++
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C+E+ L A +++D M + GC ++ TY+ILI+ + + ++ +RLF + KG+ P+
Sbjct: 361 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
TY +L+ G CQ L AA E+F + V+ V + + LC
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 195/465 (41%), Gaps = 46/465 (9%)
Query: 51 LVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQV 110
L RV +L + GF QP+ ++Y +L L S + +++
Sbjct: 187 LKGRVSEALVLIDRMVEYGF------QPD----EVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 111 KVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYI 170
+ I Y +I SL + + A S+FNE++ +SL+ L +DG
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D+ KM EM R + + F I F + KL + + +E+ R + ++
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR--GIAPDTITYN 354
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I GFCK + EA ++ D + + C+PD + Y I+ + V + + ++
Sbjct: 355 SLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 414
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
G+ P T Y +LG ++ AKEL
Sbjct: 415 GLIPNTITYNTLVLGFCQSGKLNAAKEL-------------------------------- 442
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
F M+ +G P++ T L LC + ++ +E+++ + + + YN+++ +
Sbjct: 443 --FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C + ++ +A+ + + KG+ PDV YN ++ C++ L A L+ +M GC+ +
Sbjct: 501 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
TYNILI + ++ L M G + D++T +++ L
Sbjct: 561 FTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 161/362 (44%), Gaps = 9/362 (2%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL- 231
AL +F +M R ++ S + + + I C++ LS+ +E+ E I V+
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM---EMKGIKADVVTYSS 285
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I G C + ++ K+L E+ R PD + + + + F G + E + + + G
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS---VSSIDPRS 348
+AP T Y I G E + EA ++ +++VS D + LI S +D
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD--D 403
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
+ F + KG +P T + L C+ K + E+++ + + + +Y +++
Sbjct: 404 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
LC +G L +A + ++M++ + + YN ++ C + A L+ + G
Sbjct: 464 GLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TYN++I + G + A LF M E G PD TY L+ + L ++ E+
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELI 583
Query: 529 NK 530
+
Sbjct: 584 EE 585
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 154/326 (47%), Gaps = 7/326 (2%)
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
++I+ +C+ K++ AF VL +PD I + + F L G V E ++ + ++
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD----DVLNALIGSVSSIDP 346
P I GL ++ R+ EA L + +V F D+ VLN L S +S
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS--- 226
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
A+ F M E+ ++ S + +LCK D+ + ++ + D+ +Y+ +
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ LC G+ + +++EM + + PDV +++L++ +E L AK+L+++M G
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
+ + TYN LI F + + A ++F M+ KG PD TY+ L+ C+ +
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 527 VFNKSVNHDVMLARSILSTFMISLCR 552
+F + + ++ +T ++ C+
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQ 432
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ I AI F MI+ +PT + L + + + D ++ K + N D
Sbjct: 45 GIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHD 104
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
M + +M++ C +L A+ V+ + G +PD +++L+ C E + A L D
Sbjct: 105 MYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVD 164
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M +L T + LI+ G + AL L M+E G PD TY +L LC+
Sbjct: 165 RMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 224
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
N A ++F K ++ + S + SLC+
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 188/409 (45%), Gaps = 14/409 (3%)
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
N DI P C +L+ G A K+ + + G I + V I +C+ ++
Sbjct: 133 NVPDIIP--CTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINN 190
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
LS+LD + S+ V I+ C ++++A +VLD + R+C PD I Y I+
Sbjct: 191 ALSVLDRM-----SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTIL 245
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-KELGEVIVSG- 325
E V +L + R G P Y + G+ E R+ EA K L ++ SG
Sbjct: 246 IEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC 305
Query: 326 --KFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ +L ++ + +D A M+ KG P++ T + L LC++
Sbjct: 306 QPNVITHNIILRSMCSTGRWMD---AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+++ + + + + SYN ++ C ++ A ++ M +G PD+ YN+++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
A C++ + A ++ +Q+ + GCS L TYN +I ++ G+ A++L M K + P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
D TY+SL+ GL +E + A + F++ + ++ M+ LC+
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 189/423 (44%), Gaps = 10/423 (2%)
Query: 118 DSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALK 175
D Y +I + A SV + + + P++ N++L L G + A++
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMS-----VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 176 MFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHG 235
+ D M R I + + I C ++ +G + +LDE+R R V ++++G
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR--GCTPDVVTYNVLVNG 283
Query: 236 FCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPR 295
CK R++EA K L+++ C+P+ I + I+ G + E +L + G +P
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 343
Query: 296 TNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFN 354
+ I L + + A ++ E + + N L+ G AI +
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+ +G P + T + + LCK K ++ VE+ LS+ + +YN ++ L +G
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ +A ++ EM+ K L PD Y+SL+ RE + A K + + G N T+N
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFN 523
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
++ + + + A+ M+ +G P+ T+YT L+EGL E + A E+ N+ N
Sbjct: 524 SIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583
Query: 535 DVM 537
+M
Sbjct: 584 GLM 586
Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 154/317 (48%), Gaps = 8/317 (2%)
Query: 219 ENSMINGSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
EN + +G+V ++ +I GFC+ + +A K+L+ L PD I Y ++ +
Sbjct: 126 ENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKA 185
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
G + VL + + V+P Y + L ++ +A E+ + ++ D
Sbjct: 186 GEINNALSVLDR---MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITY 242
Query: 335 NALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
LI + A+ + M ++G P + T + L +CK + DE ++ + +
Sbjct: 243 TILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ ++ ++N+++ +C++GR +A ++ +M RKG P V +N L+ CR+ LL
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A + ++M GC N +YN L+ F + +++ A+ M+ +G PD TY ++L
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 514 GLCQETNLQAAFEVFNK 530
LC++ ++ A E+ N+
Sbjct: 423 ALCKDGKVEDAVEILNQ 439
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 323 VSGKFTIDD-DVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
V+ F ++D + N L V + + F M+ G VP + + L + C+ K+
Sbjct: 94 VNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKT 153
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+ ++ ++L + D+ +YNVM+S C +G + A V+ M + PDV YN++
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTI 210
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ + C L+ A ++ D+M C ++ TY ILI + A++L M ++G
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGC 270
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVFN---------KSVNHDVMLARSILST 545
PD TY L+ G+C+E L A + N + H+++L RS+ ST
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL-RSMCST 322
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 141/315 (44%), Gaps = 10/315 (3%)
Query: 242 VEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYRE 301
+EE FK L+ + PD I + F +G + +L+ G P Y
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 302 FILGLIVERRICEAKELGEVI-VSGKFTIDDDVL--NALIGSV-SSIDPRSAIVFFNFMI 357
I G C+A E+ + V + ++ DV+ N ++ S+ S + A+ + M+
Sbjct: 178 MISGY------CKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
++ P + T + L + C+ + +++ + D+ +YNV+V+ +C GRL
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
EA + +M G P+V +N ++ + C A+KL M G S ++ T+NILI
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVM 537
+ G + A+ + M + G P++ +Y LL G C+E + A E + V+
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 538 LARSILSTFMISLCR 552
+T + +LC+
Sbjct: 412 PDIVTYNTMLTALCK 426
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
Y ++++ D+ES N + + T G L E + ++ M G PD+ +L+ CR
Sbjct: 91 YSSVNSSFALEDVESNNHLRQMVRT-GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
R A K+ + + SG ++ TYN++IS + + GEI AL + M V+PD T
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVT 206
Query: 508 YTSLLEGLCQETNLQAAFEVFNKSVNHD 535
Y ++L LC L+ A EV ++ + D
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 99/244 (40%), Gaps = 14/244 (5%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQI 100
LR SPS+V I L L + + P P LSY+ +L +++
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 395
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--N 158
+ L+++ D Y ++ +L + + A + N+ + + P + N
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ--LSSKGCSPVLITYN 453
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK- 217
+++ LA G A+K+ DEM + ++ TI + + K+ + + E +
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
R N++ S I+ G CK ++ + A L + R CKP+ +Y I+ E G
Sbjct: 514 GIRPNAVTFNS-----IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEG 568
Query: 276 SVFE 279
E
Sbjct: 569 MAKE 572
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 181/397 (45%), Gaps = 7/397 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ +A D + + ++M G+ + + + I FC +++ L++L ++ K
Sbjct: 14 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 73
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E S++ S + ++G+C GKR+ +A ++D++ +PD I + + L
Sbjct: 74 LGYEPSIVTLSSL----LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E ++ + + G P Y + GL I A L + + K D + N
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 336 ALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I S+ A+ F M KG P + T S+L LC + + ++ +
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ ++N ++ G+ EA + +M ++ +DPD+ YNSL+ C D L A
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K++++ M + C +L TYN LI F + +E LF M +G+ D TYT+L++G
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
L + + A +VF + V+ V S + LC
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 165/362 (45%), Gaps = 9/362 (2%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-L 231
A+ + D M RG + + + +GV + C+ + ++L+ K E + I V+
Sbjct: 134 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN---KMEAAKIEADVVIFNT 190
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
II CK + V++A + E+ + +P+ + Y + G + +L +
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSSIDP-RS 348
+ P + I + E + EA++L + ++ K +ID D+ N+LI D
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMI--KRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A F FM+ K P L T + L K CK + ++ E+++ +S D +Y ++
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L G A V ++M G+ PD+ Y+ L++ C L A +++D M S
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ Y +I + G+++ LF ++ KGV P+ TY +++ GLC + LQ A+ +
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 529 NK 530
K
Sbjct: 489 KK 490
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 161/368 (43%), Gaps = 9/368 (2%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK---REN 220
L G ID A + ++M +E + F I C+ + L++ E+ R N
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
+ S+I+ L +G R +A ++L ++ ++ P+ + + + + F G E
Sbjct: 220 VVTYSSLISCLCSYG-----RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-G 339
E + K + P Y I G + R+ +AK++ E +VS D D N LI G
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
S F M +G V T + L + L D +V+K + ++ D
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ +Y++++ LC +G+L +A V M++ + D+ Y +++E C+ + L+
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+ G N+ TYN +IS ++ A L M E G PD+ TY +L+ ++
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Query: 520 NLQAAFEV 527
+ A+ E+
Sbjct: 515 DKAASAEL 522
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/506 (21%), Positives = 213/506 (42%), Gaps = 66/506 (13%)
Query: 42 GLRDSLSPSLVARVIN----PYLLTHHSLALGFF--NWASQ-------------QPNFTH 82
G R S + +LV +++ P +T +L G F N AS+ QPN
Sbjct: 93 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL-- 150
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
++Y ++ L I+ ++L +++ KI D ++ II SL + ++ A ++F
Sbjct: 151 --VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E++ + I P + +SL++ L S G +A ++ +M + + + + F I F
Sbjct: 209 KEME--TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 266
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ K + + D++ KR I+ + +I+GFC R+++A ++ + + ++C P
Sbjct: 267 KEGKFVEAEKLHDDMIKRS---IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 323
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
D Y + + F V + + ++ G+ T Y I GL +
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG--------- 374
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
D +A F M+ G P + T S L LC
Sbjct: 375 -------------------------DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K ++ +EV+ + ++ D+ Y M+ +C +G++ + + + + KG+ P+V YN
Sbjct: 410 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 469
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+++ C + LL+ A L +M G + TYN LI G+ + L M
Sbjct: 470 TMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 529
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAF 525
DA+T L+ + + L +F
Sbjct: 530 RFVGDAST-IGLVANMLHDGRLDKSF 554
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 120/271 (44%), Gaps = 1/271 (0%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
+L K KLG P + G +RI +A L + +V + D LI +
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 343 SIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ S A+ + M+++G P L T + LCKR D + + A D+
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+N ++ LC + +A + +EM+ KG+ P+V Y+SL+ C A +L M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ NL T+N LI F + G+ A +L +M+++ + PD TY SL+ G C L
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A ++F V+ D +T + C+
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 92/197 (46%)
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M++ +P++ + L + K K D ++ + + + ++ +YN++++ C +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ A ++ +M + G +P + +SL+ C + A L DQM G + T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI + A+ L M+++G P+ TY ++ GLC+ ++ AF + NK
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 536 VMLARSILSTFMISLCR 552
+ I +T + SLC+
Sbjct: 181 IEADVVIFNTIIDSLCK 197
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 131/534 (24%), Positives = 225/534 (42%), Gaps = 53/534 (9%)
Query: 60 LLTHHSLALGFFNWAS----QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKI 115
L++ L LGF + + + F + Y +I+ +L + A + + ++
Sbjct: 167 LMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGF 226
Query: 116 TLDSSVYRFIIPSLIQGKNTQKAFSVF-----------NEVKFN------CE-------- 150
LDS + ++ +G N + A VF N V ++ CE
Sbjct: 227 VLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAF 286
Query: 151 ----DIGPEICNS-------LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+G + C L+ L G ID A +FDEM RG + + + V I
Sbjct: 287 GLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGL 346
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECK 258
C + K+ + + RK I SVI +I+G+CK RV AF++L + R CK
Sbjct: 347 CRDGKIEEANGV---CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACK 403
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
P+ + + E +G ++ +LK+ G++P Y I GL E + A +L
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Query: 319 GEVIVSGKFTIDDDVLN--ALIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSK 373
+ F I+ D L A+I + D SA F M+ KG T + L
Sbjct: 464 LSSM--NCFDIEPDCLTFTAIINAFCKQGKADVASA--FLGLMLRKGISLDEVTGTTLID 519
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
+CK K+ + + + + L T S NV++ L +++E ++ ++ + GL P
Sbjct: 520 GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVP 579
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
V Y +L++ R + + ++ + M SGC N+ Y I+I+ + G +E A +L
Sbjct: 580 SVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL 639
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
M + GV+P+ TYT +++G L A E V L I S+ +
Sbjct: 640 SAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 117/511 (22%), Positives = 215/511 (42%), Gaps = 62/511 (12%)
Query: 31 TPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSI 90
TP E+ L ++P++ ++VI+ + + + + FF W + ++ P + +
Sbjct: 51 TPNWEKNSSLKSLVSHMNPNVASQVIS-LQRSDNDICVRFFMWVCKHSSYCFDPTQKNQL 109
Query: 91 LK---SLSLSRQINA-IDSVLKQV------------------KVNKITLDSSVYRFIIPS 128
LK S L R +A I +++K+ +V L+ Y ++ S
Sbjct: 110 LKLIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMS 169
Query: 129 LIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG-VEF 187
L + A+ + ++ + +G +++ L +GY + A ++ G V
Sbjct: 170 LAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLD 229
Query: 188 STIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFK 247
S IG + + FC L L + D V +E + SV ++IHG C+ R+EEAF
Sbjct: 230 SHIGTSLLLG-FCRGLNLRDALKVFD-VMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFG 287
Query: 248 VLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI 307
+ D++ + C+P Y ++ + G + + + + G P + Y I GL
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLC 347
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRV-PTLS 366
+ +I EA + +V + NALI N + GRV P
Sbjct: 348 RDGKIEEANGVCRKMVKDRIFPSVITYNALI---------------NGYCKDGRVVPAFE 392
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
L+ + K CK N + ++N ++ LC G+ +A +++ M
Sbjct: 393 LLTVMEKRACKPN--------------------VRTFNELMEGLCRVGKPYKAVHLLKRM 432
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
GL PD+ YN L++ CRE + A KL M + T+ +I+ F + G+
Sbjct: 433 LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ A ML KG++ D T T+L++G+C+
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCK 523
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 74/425 (17%), Positives = 163/425 (38%), Gaps = 23/425 (5%)
Query: 43 LRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQI 100
L + LSP +V+ + L + S F P L++ +I+ + +
Sbjct: 433 LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQ-GKNTQKAFSVFNEVKFNCEDIGPEICNS 159
+ + L + I+LD +I + + GK F + VK P N
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTT-PHSLNV 551
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
+L +L+ + L M +++ G+ S + + + + + +L E+ K
Sbjct: 552 ILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL-ELMKLS 610
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+ N + II+G C+ RVEEA K+L ++ P+ + Y ++ + + G +
Sbjct: 611 GCLPNVYPYTI-IINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDR 669
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
++ + G Y + G ++ ++ + E V D + +N LI
Sbjct: 670 ALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELIS 729
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
V + G + L L LCK ++DE ++ + + F +
Sbjct: 730 VVEQLG--------------GCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVFLE 773
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
++ ++++ C+ + + +I + + G P + +++ +E A++L
Sbjct: 774 -KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVM 832
Query: 460 QMFAS 464
++ S
Sbjct: 833 ELLTS 837
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/511 (22%), Positives = 225/511 (44%), Gaps = 49/511 (9%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
A GF +W ++ F SY +++ L+ + +++ + ++ + D + Y +I
Sbjct: 168 ARGFLDWMWKE-GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILI 226
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRG 184
++ K+ + A +++ + + P + N +++ L+ G +D+ LK+++ M
Sbjct: 227 DGFLKEKDHKTAMELWDRL-LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNE 285
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
E + I C+ + + S+ +E+ +R+ S+ V ++ GFC+ +++E
Sbjct: 286 REKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI--DVVTYNTMLGGFCRCGKIKE 343
Query: 245 AFKVLDELRIRECKP--DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREF 302
+ L+ RI E K + ++Y I+ + G + E ++ + G A Y F
Sbjct: 344 S---LELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIF 400
Query: 303 ILGLIV-----------------------------------ERRICEAKELGEVIVSGKF 327
I GL V ++R+ EA L + +
Sbjct: 401 IHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGV 460
Query: 328 TIDDDVLNALIGSVSSIDPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELV 385
++ V NALIG + D R A F M + G PT+ + + L LCK K E
Sbjct: 461 ELNSHVCNALIGGLIR-DSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEAS 519
Query: 386 EVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEAC 445
K + N + D+++Y++++ LC ++ A + + + GL+ DV +N L+
Sbjct: 520 AFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGL 579
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
C L A + M C+ NL TYN L+ F +VG+ A ++ M + G+ PD
Sbjct: 580 CSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDI 639
Query: 506 TTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+Y ++++GLC + A E F+ + NH +
Sbjct: 640 ISYNTIMKGLCMCRGVSYAMEFFDDARNHGI 670
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 132/578 (22%), Positives = 230/578 (39%), Gaps = 98/578 (16%)
Query: 46 SLSPSLVARVI----NPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQIN 101
SLSP V +++ NP A F+ A++ P + HS + YH IL+ LS +R +N
Sbjct: 7 SLSPKHVLKLLKSEKNP------RAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVN 60
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK--FNCEDIGPEI--C 157
+ +++ ++ + D V +I + + +A VF ++ F CE P I
Sbjct: 61 HVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCE---PAIRSY 117
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+LL +F GV + + V I C+ + + LD + K
Sbjct: 118 NTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWK 177
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF----- 271
V + +I+ K ++++A ++ DE+ R PD Y I+ + F
Sbjct: 178 EG---FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKD 234
Query: 272 -----KLMGSVFEREVV-----------------------LKKKRKLGVAPRTND---YR 300
+L + E V LK ++ R D Y
Sbjct: 235 HKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYS 294
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEK 359
I GL + +A+ + + K +ID N ++G + ++ + M K
Sbjct: 295 SLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK 354
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
V +S + L K L + K DE +++++ A Y D +Y + + LC +G + +A
Sbjct: 355 NSVNIVS-YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKA 413
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL---------------------- 457
GV+QE++ G DV Y S+++ C++ L A L
Sbjct: 414 LGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGG 473
Query: 458 -------------WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
+M +GC + +YNILI + G+ A MLE G PD
Sbjct: 474 LIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPD 533
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNK----SVNHDVML 538
TY+ LL GLC++ + A E++++ + DVM+
Sbjct: 534 LKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMM 571
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 188/438 (42%), Gaps = 21/438 (4%)
Query: 88 HSILKS-LSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
H+I+ S LS +++ + +++K N+ D Y +I L N KA SVFNE+
Sbjct: 258 HNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELD 317
Query: 147 FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG 206
I N++L G I +L+++ M H+ + + + + I EN K+
Sbjct: 318 ERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKID 376
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ +M+ + + + + + I HG C V +A V+ E+ D AY
Sbjct: 377 EA-TMIWRLMPAKGYAADKTTYGIFI-HGLCVNGYVNKALGVMQEVESSGGHLDVYAYAS 434
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA----KELGE-- 320
+ + + E ++K+ K GV ++ I GLI + R+ EA +E+G+
Sbjct: 435 IIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG 494
Query: 321 ---VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
+VS I G S+ F M+E G P L T S L LC+
Sbjct: 495 CRPTVVSYNILICGLCKAGKFGEASA--------FVKEMLENGWKPDLKTYSILLCGLCR 546
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
K D +E++ + TD+ +N+++ LC+ G+L +A V+ M+ + ++
Sbjct: 547 DRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVT 606
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
YN+LME + A +W M+ G ++ +YN ++ + A+ F +
Sbjct: 607 YNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDAR 666
Query: 498 EKGVAPDATTYTSLLEGL 515
G+ P T+ L+ +
Sbjct: 667 NHGIFPTVYTWNILVRAV 684
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 110/221 (49%), Gaps = 4/221 (1%)
Query: 333 VLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLS 392
+LNA + + + S +F G P L T + L K CK+ + ++ +
Sbjct: 120 LLNAFVEAKQWVKVESLFAYFE---TAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMW 176
Query: 393 ANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLR 452
+ D+ SY+ +++ L +G+L +A + EM +G+ PDV+ YN L++ +E +
Sbjct: 177 KEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHK 236
Query: 453 PAKKLWDQMFA-SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A +LWD++ S N+KT+NI+IS S+ G ++ L+++ M + D TY+SL
Sbjct: 237 TAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSL 296
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ GLC N+ A VFN+ + +T + CR
Sbjct: 297 IHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR 337
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 130/559 (23%), Positives = 234/559 (41%), Gaps = 51/559 (9%)
Query: 29 KWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYH 88
KW P E+ L L L+ + LV ++ + ++ + FF WA ++ NF H +Y
Sbjct: 75 KWGPDAEKALEVLKLK--VDHRLVRSILE--IDVEINVKIQFFKWAGKRRNFQHDCSTYM 130
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNK-ITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
++++ L +R + +++V N +++ +V ++ +L + K KA SVF + K
Sbjct: 131 TLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKG 190
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEF-STIGFGVFIWKFCENAKLG 206
NS++ +L +G + +++ EM + G F TI + I + + +
Sbjct: 191 RKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRND 250
Query: 207 QVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRI 266
+ + DE++ +N M I ++ + K +VE+A + +E++ C P Y
Sbjct: 251 SAIRLFDEMK--DNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTE 308
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRT---NDYREFILGLI--VERRICEAKELGEV 321
+ + G V E K + G+ P N+ ILG + VE E+G
Sbjct: 309 LIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN-ILGKVGRVEELTNVFSEMGMW 367
Query: 322 IVSGKFTIDDDVLNALIGS---------------VSSIDP------------------RS 348
+ + V+ AL S S+ P
Sbjct: 368 RCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEK 427
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A++ M EKG P + +L L K + + E++K L N Y VM+
Sbjct: 428 ALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIK 487
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
G+L EA + EMK +G PDV YN+LM + ++ A L +M +GC
Sbjct: 488 HFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRA 547
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF--- 525
++ ++NI+++ F+ G A+ +F + G+ PD TY +LL + A
Sbjct: 548 DINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMM 607
Query: 526 -EVFNKSVNHDVMLARSIL 543
E+ +K +D + SIL
Sbjct: 608 REMKDKGFEYDAITYSSIL 626
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 177/374 (47%), Gaps = 3/374 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L +G + +A+ + D M G + + + +G + C++ + + +L ++ +
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R+ + +V +II G CK ++ AF + +E+ I+ K D I Y + F G
Sbjct: 241 RKIKL--DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ +L+ K + P + I + E ++ EA+EL + ++ + D +L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I G A + M+ KG P + T + L CK N D+ +E+++ +S
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D +YN ++ C G+L A + QEM + + PD+ Y L++ C A +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+++++ S ++ YNI+I +++ A LF ++ KGV PD TY ++ GLC
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 517 QETNLQAAFEVFNK 530
++ +L A +F K
Sbjct: 539 KKGSLSEADLLFRK 552
Score = 125 bits (314), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 173/380 (45%), Gaps = 7/380 (1%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L +V+A D L + +M +G+ + + I C KL S + ++ K
Sbjct: 78 LFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLG 137
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+V +I+G C RV EA +++D + KP I + L G V +
Sbjct: 138 YE--PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSD 195
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+++ + + G P Y + + + A EL + K +D + +I
Sbjct: 196 AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIID 255
Query: 340 SV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
+ S+D +A FN M KG + + L + C + D+ ++ + +
Sbjct: 256 GLCKDGSLD--NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ +++ ++ G+LREA + +EM ++G+ PD Y SL++ C+E+ L A
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+ D M + GC N++T+NILI+ + + I+ L LF M +GV D TY +L++G C
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 517 QETNLQAAFEVFNKSVNHDV 536
+ L+ A E+F + V+ V
Sbjct: 434 ELGKLEVAKELFQEMVSRRV 453
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 171/371 (46%), Gaps = 13/371 (3%)
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
NEV + GP +L V+ G A+++ +M R ++ + + + I C++
Sbjct: 211 NEVTY-----GP-----VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD 260
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
L ++ +E+ + +I +I GFC R ++ K+L ++ R+ PD +
Sbjct: 261 GSLDNAFNLFNEMEIK--GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
A+ + + F G + E E + K+ + G++P T Y I G E ++ +A + +++
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 323 VSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
VS + N LI G + + F M +G V T + L + C+ K
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+ E+++ + + D+ SY +++ LC +G +A + +++++ ++ D+ YN +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
+ C + A L+ + G ++KTYNI+I + G + A LF M E G
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 502 APDATTYTSLL 512
+P+ TY L+
Sbjct: 559 SPNGCTYNILI 569
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/475 (22%), Positives = 206/475 (43%), Gaps = 47/475 (9%)
Query: 51 LVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQV 110
L +V + LL + GF QPN ++Y +LK + S Q +L+++
Sbjct: 189 LNGKVSDAVLLIDRMVETGF------QPN----EVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 111 KVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYI 170
+ KI LD+ Y II L + + AF++FNE++ I +L+ G
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D+ K+ +M R + + F I F + KL + + E+ +R S +V
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS--PDTVTYT 356
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+I GFCK ++++A +LD + + C P+ + I+ + + + + +K
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAI 350
GV T Y I G ++ AKEL + +VS + R I
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV-------------------RPDI 457
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
V + +++ LC + ++ +E+++ + + D+ YN+++ +
Sbjct: 458 VSYKILLD---------------GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C + ++ +A+ + + KG+ PDV YN ++ C++ L A L+ +M G S N
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
TYNILI G+ + +L + G + DA+T +++ L + L+ +F
Sbjct: 563 CTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRLKKSF 616
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 93/213 (43%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ I A+ F M P L S L + + + D ++++ K + +
Sbjct: 47 GIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHN 106
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ + ++M++ C +L A+ + ++ + G +PD +++L+ C E + A +L D
Sbjct: 107 LYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVD 166
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M G L T N L++ G++ A+ L M+E G P+ TY +L+ +C+
Sbjct: 167 RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSG 226
Query: 520 NLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A E+ K + L S + LC+
Sbjct: 227 QTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 184/398 (46%), Gaps = 7/398 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ +A D + + + M + + + + + I FC ++L L++L ++ K
Sbjct: 84 NKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK 143
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E ++ S + ++G+C GKR+ EA ++D++ + E +P+ + + + L
Sbjct: 144 LGYEPDIVTLSSL----LNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHN 199
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E ++ + G P Y + GL I A L + + GK D +
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 336 ALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I ++ + + A+ F M KG P + T ++L + LC + + + +
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ +++ ++ G+L EA + EM ++ +DPD+ Y+SL+ C D L A
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K +++ M + C N+ TYN LI F + +E + LF M ++G+ + TY +L++G
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L Q + A ++F K V+ V S + LC+
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 207/476 (43%), Gaps = 61/476 (12%)
Query: 58 PYLLTHHSLALGFF--NWASQ-------------QPNFTHSPLSYHSILKSLSLSRQINA 102
P +T ++L G F N AS+ QP+ +Y +++ L I+
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL----FTYGTVVNGLCKRGDIDL 238
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSL 160
S+LK+++ KI D +Y II +L KN A ++F E+ + + I P + NSL
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM--DNKGIRPNVVTYNSL 296
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
+ L + G +A ++ +M R + + + F I F + KL + + DE+ KR
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS- 355
Query: 221 SMINGSVIAVL-IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
I+ + +I+GFC R++EA + + + ++C P+ + Y + + F V E
Sbjct: 356 --IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+ ++ + G+ T Y I GL + G+ ++ K
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLF---------QAGDCDMAQKI------------ 452
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
F M+ G P + T S L LCK K ++ + V++ L + D
Sbjct: 453 -------------FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ +YN+M+ +C +G++ + + + + KG+ P+V Y +++ CR+ L A L+
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 559
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+M G N TYN LI G+ + L M G DA+T + ++ L
Sbjct: 560 EMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 169/375 (45%), Gaps = 9/375 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L A+ + D M RG + +G + C+ + LS+L +K
Sbjct: 189 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL---KK 245
Query: 218 RENSMINGSV-IAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E I V I II C K V +A + E+ + +P+ + Y + G
Sbjct: 246 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL-- 334
+ +L + + P + I + E ++ EA++L + ++ K +ID D+
Sbjct: 306 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTY 363
Query: 335 NALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
++LI D A F MI K P + T + L K CK + +E +E+++ +S
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ +YN ++ L +G A + ++M G+ PD+ Y+ L++ C+ L
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A +++ + S ++ TYNI+I + G++E LF ++ KGV P+ YT+++
Sbjct: 484 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 543
Query: 514 GLCQETNLQAAFEVF 528
G C++ + A +F
Sbjct: 544 GFCRKGLKEEADALF 558
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 166/369 (44%), Gaps = 5/369 (1%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L G ID AL + +M +E + + I C + L++ E+ +N I
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM---DNKGI 286
Query: 224 NGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+V+ +I C R +A ++L ++ R+ P+ + + + + F G + E E
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSV 341
+ + K + P Y I G + R+ EAK + E+++S + N LI G
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ + F M ++G V T + L + L + D +++K + ++ D+
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+Y++++ LC G+L +A V + +++ ++PD+ YN ++E C+ + L+ +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
G N+ Y +IS F G E A LF M E G P++ TY +L+ ++ +
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDK 586
Query: 522 QAAFEVFNK 530
A+ E+ +
Sbjct: 587 AASAELIKE 595
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F M++ +P++ + L + K NK D ++ + + + D+ SYN++++
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C +L A V+ +M + G +PD+ +SL+ C + A L DQMF
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N T+N LI + A+ L M+ +G PD TY +++ GLC+ ++ A +
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 529 NKSVNHDVMLARSILSTFMISLC 551
K + I +T + +LC
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALC 266
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 125/509 (24%), Positives = 222/509 (43%), Gaps = 20/509 (3%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDS 105
++SPS V+ + + L AL F +W SQ P + HS SY S+L L N
Sbjct: 87 AISPSHVSSLFS--LDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLI----NNGYVG 140
Query: 106 VLKQVKVNKI-TLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
V+ ++++ I + DS + L + N + F + ++ C N+LL L
Sbjct: 141 VVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCY-------NTLLNSL 193
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
A G +D +++ EM V + + + +C KLG V V K + ++
Sbjct: 194 ARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYC---KLGNVEEANQYVSKIVEAGLD 250
Query: 225 GSVIAVL-IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVV 283
+I G+C+ K ++ AFKV +E+ ++ C+ + +AY + + + E +
Sbjct: 251 PDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDL 310
Query: 284 LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-S 342
K + P Y I L R EA L + + + LI S+ S
Sbjct: 311 FVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCS 370
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
A M+EKG +P + T + L CKR ++ V+V +++ + + +
Sbjct: 371 QCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRT 430
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
YN ++ C S + +A GV+ +M + + PDV YNSL++ CR A +L M
Sbjct: 431 YNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G + TY +I + +E A LF ++ +KGV P+ YT+L++G C+ +
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLC 551
A + K ++ + + + + LC
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 190/460 (41%), Gaps = 12/460 (2%)
Query: 74 ASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
A P+F +Y S++ + +++ V ++ + + Y +I L +
Sbjct: 247 AGLDPDF----FTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 134 NTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+A +F VK ++ P + L+ L AL + EM G++ +
Sbjct: 303 RIDEAMDLF--VKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 360
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ V I C K + +L ++ E ++ + +I+G+CK +E+A V++
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQML--EKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ R+ P+ Y + + + +V + VL K + V P Y I G
Sbjct: 419 MESRKLSPNTRTYNELIKGY-CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
A L ++ D ++I S+ S A F+ + +KG P + +
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L CK K DE + + + + + + ++N ++ LC G+L+EA + ++M + G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
L P VS L+ ++ A + QM +SG + TY I + G + A
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ M E GV+PD TY+SL++G AF+V +
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 195/454 (42%), Gaps = 35/454 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+S++ S ++ +L + + D Y +I SL + K ++A +F+
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
++ + + P + +L+ G +D A M ++M + +++ F I C +
Sbjct: 523 LEQ--KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFI 262
KL + ++L+E + S +LI H K + A+ ++ KPD
Sbjct: 581 GKLKEA-TLLEEKMVKIGLQPTVSTDTILI-HRLLKDGDFDHAYSRFQQMLSSGTKPDAH 638
Query: 263 AYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVI 322
Y + + G + + E ++ K R+ GV+P Y I G G++
Sbjct: 639 TYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY------------GDL- 685
Query: 323 VSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIE------KGRVPTLSTLSNLSKNLC 376
G+ DVL + + + + ++E KG P L +SN+ +
Sbjct: 686 --GQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMME--- 740
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR-KGLDPDV 435
D +VE+ + + + + +SY ++ +C G LR A V M+R +G+ P
Sbjct: 741 ----FDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSE 796
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
+N+L+ CC+ A K+ D M G L++ +LI + GE E +F N
Sbjct: 797 LVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQN 856
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN 529
+L+ G D + +++G+ ++ ++A +E+FN
Sbjct: 857 LLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFN 890
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 115/534 (21%), Positives = 215/534 (40%), Gaps = 39/534 (7%)
Query: 51 LVARVINPYLLTHHSLALGFF---NWASQQPNFTHSPL--------SYHSILKSLSLSRQ 99
+V ++P T+ SL +G+ + S F PL +Y ++ L ++R+
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 100 INAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--C 157
I+ + ++K ++ Y +I SL + +A ++ E++ I P I
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET--GIKPNIHTY 361
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
L+ L S + A ++ +M +G+ + I + I +C K G + +D V
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC---KRGMIEDAVDVVEL 418
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E+ ++ + +I G+CK V +A VL+++ R+ PD + Y + + G+
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+L G+ P Y I L +R+ EA +L + + + + A
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G + A + M+ K +P T + L LC K E + + +
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ + +++ L G AY Q+M G PD Y + ++ CRE L A+
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG- 514
+ +M +G S +L TY+ LI + ++G+ A + M + G P T+ SL++
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Query: 515 --------------LCQETNL---QAAFEVFNKSVNHDVMLARSILSTFMISLC 551
LC +N+ E+ K V H V ++ +C
Sbjct: 718 LEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGIC 771
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 35/210 (16%)
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
DE+ +VY + + ++ +YN MV+ C G + EA + ++ GLDPD Y SL
Sbjct: 200 DEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSL 259
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGN-------------------------------- 469
+ C+ L A K++++M GC N
Sbjct: 260 IMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDEC 319
Query: 470 ---LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
++TY +LI AL L M E G+ P+ TYT L++ LC + + A E
Sbjct: 320 FPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARE 379
Query: 527 VFNKSVNHDVMLARSILSTFMISLCRRVLI 556
+ + + +M + + C+R +I
Sbjct: 380 LLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 126/336 (37%), Gaps = 53/336 (15%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
L+ L DG D+A F +M G + + FI +C +L M+ + RE
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM--AKMRE 665
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD---------------FIAY 264
N + +I G+ + AF VL +R C+P +
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ 725
Query: 265 RIVAEEFKLMGSVFEREVV---LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ E M ++ E + V L+K + V P Y + ILG ICE +G +
Sbjct: 726 KGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILG------ICE---VGNL 776
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
V+ K VF + +G P+ + L CK K
Sbjct: 777 RVAEK------------------------VFDHMQRNEGISPSELVFNALLSCCCKLKKH 812
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
+E +V + + +ES V++ L G V Q + + G D + +
Sbjct: 813 NEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKII 872
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
++ ++ L+ +L++ M +GC + +TY++LI
Sbjct: 873 IDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 181/387 (46%), Gaps = 8/387 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L A+ + D M +G + + +GV + C+ ++L+++
Sbjct: 190 NTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME- 248
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ + G +I II G CK K +++A + E+ + +P+ + Y + G
Sbjct: 249 -QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--N 335
+ +L + + P + I + E ++ EA++L + +V K +ID ++ +
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV--KRSIDPSIVTYS 365
Query: 336 ALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+LI D A F FM+ K P + T + L K CK + +E +EV++ +S
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ +YN+++ L +G A + +EM G+ P++ YN+L++ C+ L A
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+++ + S + TYNI+I + G++E LF N+ KGV PD Y +++ G
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARS 541
C++ + + A +F K + D L S
Sbjct: 546 FCRKGSKEEADALF-KEMKEDGTLPNS 571
Score = 125 bits (314), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 198/451 (43%), Gaps = 10/451 (2%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN +++++++ L L + + +++ ++ D Y ++ L + +T
Sbjct: 183 QPN----TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
AF++ N+++ + G I N+++ L ++D+AL +F EM +G+ + + + I
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIR 255
C + +L ++ +R+ IN V +I F K ++ EA K+ DE+ R
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERK---INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 256 ECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA 315
P + Y + F + + E + + + P Y I G +R+ E
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 316 KELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
E+ + + N LI G + D A F M+ G P + T + L
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK K ++ + V++ L + + +YN+M+ +C +G++ + + + + KG+ PD
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
V YN+++ CR+ A L+ +M G N YN LI G+ E + L
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
M G A DA+T L+ + + L +F
Sbjct: 596 EMRSCGFAGDAST-IGLVTNMLHDGRLDKSF 625
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 178/396 (44%), Gaps = 7/396 (1%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK-- 217
LL+ +A D + + ++M + G+ + + + I FC ++L L++L ++ K
Sbjct: 87 LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 146
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E +++ S + ++G+C KR+ EA ++D++ + +P+ + + + L
Sbjct: 147 YEPNIVTLSSL----LNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E ++ + G P Y + GL A L + GK + N +
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 338 IGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I + A+ F M KG P + T S+L LC + + + +
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
D+ +++ ++ G+L EA + EM ++ +DP + Y+SL+ C D L AK+
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
+++ M + C ++ TYN LI F + +E + +F M ++G+ + TY L++GL
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
Q + A E+F + V+ V +T + LC+
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%)
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+L +A + EM + P + ++ L+ A + + L +QM G N TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
ILI+ F ++ AL + M++ G P+ T +SLL G C + A + ++
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 174/382 (45%), Gaps = 11/382 (2%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK-- 217
L + +A D L + +M +G+ + + I FC KL S + ++ K
Sbjct: 94 LFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG 153
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
E + I S + I+G C RV EA +++D + KPD I + L G
Sbjct: 154 YEPNTITFSTL----INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKE 209
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E +++ K + G P Y + + + A EL + +D + +
Sbjct: 210 AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269
Query: 338 IGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
I + S+D +A FN M KG + T + L C + D+ ++ + +
Sbjct: 270 IDGLCKHGSLD--NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ +++V++ G+LREA + +EM +G+ PD Y SL++ C+E+ L A
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++ D M + GC N++T+NILI+ + + I+ L LF M +GV D TY +L++G
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 515 LCQETNLQAAFEVFNKSVNHDV 536
C+ L A E+F + V+ V
Sbjct: 448 FCELGKLNVAKELFQEMVSRKV 469
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/470 (21%), Positives = 206/470 (43%), Gaps = 52/470 (11%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQIN-AIDSVLKQVKVNKITLDSSVYRFI 125
A+G +PN +++ +++ L L +++ A++ V + V++ ++ +
Sbjct: 145 AMGKIIKLGYEPN----TITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLV 200
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCE----DIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
+ GK + + V++ C+ GP +L V+ G A+++ +M
Sbjct: 201 NGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP-----VLNVMCKSGQTALAMELLRKME 255
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGK 240
R ++ + + + I C++ L ++ +E+ E I ++I ++I GFC
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM---EMKGITTNIITYNILIGGFCNAG 312
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
R ++ K+L ++ R+ P+ + + ++ + F G + E E + K+ G+AP T Y
Sbjct: 313 RWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYT 372
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKG 360
I G E + +A ++ + M+ KG
Sbjct: 373 SLIDGFCKENHLDKANQM----------------------------------VDLMVSKG 398
Query: 361 RVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P + T + L CK N+ D+ +E+++ +S D +YN ++ C G+L A
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
+ QEM + + P++ Y L++ C A ++++++ S ++ YNI+I
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+++ A LF ++ KGV P TY ++ GLC++ L A +F K
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 194/449 (43%), Gaps = 41/449 (9%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN ++Y +L + S Q +L++++ I LD+ Y II L + +
Sbjct: 225 QPN----AVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
AF++FNE++ N L+ + G D+ K+ +M R + + + F V I
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
F + KL + + E+ R + ++ +I GFCK +++A +++D + +
Sbjct: 341 DSFVKEGKLREAEELHKEMIHR--GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
C P+ + I+ + + + + +K GV T Y I G ++ AK
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
EL F M+ + P + T L LC
Sbjct: 459 EL----------------------------------FQEMVSRKVPPNIVTYKILLDGLC 484
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
+S++ +E+++ + + D+ YN+++ +C + ++ +A+ + + KG+ P V
Sbjct: 485 DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK 544
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN ++ C++ L A+ L+ +M G + + TYNILI G+ +++L +
Sbjct: 545 TYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAF 525
G + DA+T +++ L + L+ +F
Sbjct: 605 KRCGFSVDASTIKMVIDML-SDGRLKKSF 632
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 95/211 (45%)
Query: 343 SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
I AI F MI +PT+ S L + K + D ++ + K + ++ +
Sbjct: 66 DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
++M++ C +L A+ + ++ + G +P+ +++L+ C E + A +L D+M
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
G +L T N L++ G+ A+ L M+E G P+A TY +L +C+
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
A E+ K ++ L S + LC+
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 186/400 (46%), Gaps = 9/400 (2%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK-- 217
LL+ ++ D + ++++M G+ + + + FC ++L LS L ++ K
Sbjct: 87 LLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLG 146
Query: 218 RENSMIN-GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E S++ GS +++GFC+G RV +A + D++ KP+ + Y + +
Sbjct: 147 HEPSIVTFGS-----LLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
V +L + K G+ P Y I GL R +A + + + D NA
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNA 261
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI V A F+ MI + P + T S L LC ++ DE E++ + +
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
F D+ +Y+++++ C S ++ + EM ++G+ + Y L++ CR L A+
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+++ +M G N+ TYN+L+ + G+IE AL + +M + G+ D TY ++ G+
Sbjct: 382 EIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGM 441
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
C+ + A++++ +M +T M+ L ++ L
Sbjct: 442 CKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGL 481
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 164/377 (43%), Gaps = 7/377 (1%)
Query: 157 CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVR 216
CN LL + AL +M G E S + FG + FC ++ L M D++
Sbjct: 119 CNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV 178
Query: 217 KRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
VI II G CK K+V+ A +L+ + PD + Y + G
Sbjct: 179 GMGYK--PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ ++ K + P + I + E R+ EA+E E ++ D +
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 337 LIGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
LI + S +D + F FM+ KG P + T S L CK K + ++++ +S
Sbjct: 297 LIYGLCMYSRLDEAEEM--FGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ +Y +++ C +G+L A + + M G+ P++ YN L+ C +
Sbjct: 355 RGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEK 414
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A + M +G ++ TYNI+I + GE+ A ++ ++ +G+ PD TYT+++
Sbjct: 415 ALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMML 474
Query: 514 GLCQETNLQAAFEVFNK 530
GL ++ + A +F K
Sbjct: 475 GLYKKGLRREADALFRK 491
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 157/352 (44%), Gaps = 11/352 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
SLL + +AL MFD+M G + + + + I C++ QV + LD + +
Sbjct: 155 GSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSK---QVDNALDLLNR 211
Query: 218 RENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E I V+ +I G C R +A +++ + RE PD + + + G
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
V E E ++ + + P Y I GL + R+ EA+E+ +VS D +
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G S + F M ++G V T + L + C+ K + E+++ +
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
++ +YNV++ LC +G++ +A ++ +M++ G+D D+ YN ++ C+ + A
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA- 450
Query: 456 KLWDQMFASGCSG---NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
WD + C G ++ TY ++ + G A LF M E G+ P+
Sbjct: 451 --WDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
+FF+ M++ +P+++ S L + K K D ++ +++ + ++ + N++++
Sbjct: 68 LFFH-MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C +L A + +M + G +P + + SL+ CR D + A ++DQM G N+
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
YN +I + +++ AL L + M + G+ PD TY SL+ GLC
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC 232
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%)
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
P ++ ++ L+ A + LW+QM G NL T NIL++ F ++ AL
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
M++ G P T+ SLL G C+ + A +F++ V I +T + LC+
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 136/585 (23%), Positives = 254/585 (43%), Gaps = 63/585 (10%)
Query: 13 ISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFN 72
IS +IS + +P P LE L LS +++ VI + + L FF
Sbjct: 33 ISGEVISILAKKKPIE---PALEP------LVPFLSKNIITSVIKDEV--NRQLGFRFFI 81
Query: 73 WASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQG 132
WAS++ S S+ ++ LS + L+++K +++DS + +I + +
Sbjct: 82 WASRRER-LRSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKM 140
Query: 133 KNTQKAFSVFNEVK-FNCEDIGPEI--CNSLLAVLASDG-YIDNALKMFDEMSHRGVEFS 188
+KA F +K F+C P++ N +L V+ + + A +++EM +
Sbjct: 141 GMAEKAVESFGRMKEFDCR---PDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPN 197
Query: 189 TIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKV 248
FG+ + + + M D++ R S V ++I G C+ ++A K+
Sbjct: 198 LYTFGILMDGLYKKGRTSDAQKMFDDMTGRGIS--PNRVTYTILISGLCQRGSADDARKL 255
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
E++ PD +A+ + + F +G + E +L+ K G Y I GL
Sbjct: 256 FYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFR 315
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLST 367
RR +A EL ++ D + LI +S A+ + M KG P
Sbjct: 316 ARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYC 375
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
+ + K LC R +E + +S + F D ++ +++ +C +G +REA + E++
Sbjct: 376 YNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIE 435
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM-------------------------- 461
+ G P V+ +N+L++ C+ L+ A+ L +M
Sbjct: 436 KSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVES 495
Query: 462 ------------FA-SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTY 508
FA +G S ++ +YN+LI+ F G+I+GAL+L + + KG++PD+ TY
Sbjct: 496 GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTY 555
Query: 509 TSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+L+ GL + + AF++F D + ++ + M CR+
Sbjct: 556 NTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRK 598
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/474 (20%), Positives = 185/474 (39%), Gaps = 95/474 (20%)
Query: 122 YRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMS 181
+R +I + Q+++S N +FN I ++++LA I+ AL+
Sbjct: 7 FRSVIQFYSKPSWMQRSYSSGN-AEFN-------ISGEVISILAKKKPIEPALEPLVPFL 58
Query: 182 HRGVEFSTI--------GFGVFIWKFCENAK-----LGQVLSMLDEVRK----------- 217
+ + S I GF FIW G V+ ML E
Sbjct: 59 SKNIITSVIKDEVNRQLGFRFFIWASRRERLRSRESFGLVIDMLSEDNGCDLYWQTLEEL 118
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV------AEEF 271
+ + S ++I + K E+A + ++ +C+PD Y ++ E F
Sbjct: 119 KSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVF 178
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
++ E++ K +P + + GL + R +A+++
Sbjct: 179 FMLAFAVYNEML-----KCNCSPNLYTFGILMDGLYKKGRTSDAQKM------------- 220
Query: 332 DVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
F+ M +G P T + L LC+R +D+ +++ +
Sbjct: 221 ---------------------FDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEM 259
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
+ + D ++N ++ C GR+ EA+ +++ ++ G + Y+SL++ R
Sbjct: 260 QTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRY 319
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A +L+ M ++ Y ILI S+ G+IE AL+L +M KG++PD Y ++
Sbjct: 320 TQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAV 379
Query: 512 LEGLCQETNLQ---------AAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
++ LC L+ + E F + H +++ S+CR L+
Sbjct: 380 IKALCGRGLLEEGRSLQLEMSETESFPDACTHTILIC---------SMCRNGLV 424
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 121/531 (22%), Positives = 197/531 (37%), Gaps = 125/531 (23%)
Query: 138 AFSVFNE-VKFNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
AF+V+NE +K NC P + L+ L G +A KMFD+M+ RG+ + + + +
Sbjct: 182 AFAVYNEMLKCNCS---PNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTI 238
Query: 195 FIWKFCENA--------------------------------KLGQVLSMLDEVRKRENSM 222
I C+ KLG+++ + +R E
Sbjct: 239 LISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEK-- 296
Query: 223 INGSVIAVL----IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVF 278
+G V+ + +I G + +R +AF++ + + KPD I Y I+ + G +
Sbjct: 297 -DGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIE 355
Query: 279 EREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI 338
+ +L G++P T Y I L + E + L + + D LI
Sbjct: 356 DALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILI 415
Query: 339 GSVSSID-PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR------------------- 378
S+ R A F + + G P+++T + L LCK
Sbjct: 416 CSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPA 475
Query: 379 ----------NKS-DELVEVYKVLSAN---DYFTD------MESYNVMVSFLCTSGRLRE 418
N+S D +VE +L A +F D + SYNV+++ C +G +
Sbjct: 476 SLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDG 535
Query: 419 AYGVIQEMKRKGLDPDVSFYN---------------------------------SLMEAC 445
A ++ ++ KGL PD YN SLM
Sbjct: 536 ALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWS 595
Query: 446 CREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDA 505
CR+ + A LW + + +T N + F E GE E ALR ++E D
Sbjct: 596 CRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKE-GETERALR---RLIELDTRKDE 651
Query: 506 TT---YTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
T YT L GLCQ A VF+ +++ + LC+R
Sbjct: 652 LTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKR 702
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 78/423 (18%), Positives = 156/423 (36%), Gaps = 79/423 (18%)
Query: 87 YHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVK 146
Y +++ LS + +I +L + I+ D+ Y +I +L ++ S+ +++
Sbjct: 341 YTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSL--QLE 398
Query: 147 FNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + P+ C L+ + +G + A ++F E+ G S F I C++ +
Sbjct: 399 MSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGE 458
Query: 205 LGQVLSMLDEV-----------------RKRENSMINGSVIAV----------------- 230
L + +L ++ R + + +GS++
Sbjct: 459 LKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIV 518
Query: 231 ---LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKK 287
++I+GFC+ ++ A K+L+ L+++ PD + Y + +G E + K
Sbjct: 519 SYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAK 578
Query: 288 RKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA----------- 336
+P YR + +R++ A L + +DD+ N
Sbjct: 579 DDFRHSPAV--YRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETE 636
Query: 337 ------------------------LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
LIG S A++ F+ + EK + T + L
Sbjct: 637 RALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLI 696
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYG-VIQEMKRKGL 431
LCKR + D +EV+ N++ N ++S L S E + M+R G
Sbjct: 697 HGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLLESTEKMEIVSQLTNRMERAGY 756
Query: 432 DPD 434
+ D
Sbjct: 757 NVD 759
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 210/504 (41%), Gaps = 28/504 (5%)
Query: 61 LTHHSLALGFFNWASQQPNF------------TH--------SPLSYHSILKSLSLSRQI 100
L H LAL F W +QP TH P + ILK LSL
Sbjct: 47 LVHGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARH--ILKELSLMSGK 104
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSL 160
++ + SVY +I ++ Q + +F + + CN++
Sbjct: 105 SSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAI 164
Query: 161 LAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
L + G + EM R + F + I C + ++ +K E
Sbjct: 165 LGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLM---QKMEK 221
Query: 221 SMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
S +++ ++H +CK R + A ++LD ++ + D Y ++ + + +
Sbjct: 222 SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 281
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
++L+ RK + P Y I G E ++ A +L ++S + + NALI
Sbjct: 282 GYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID 341
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
G +S + + A+ F M KG P+ + L LCK + D Y + N
Sbjct: 342 GHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV 401
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+Y M+ LC +G L EA ++ EM + G+DPD+ Y++L+ C+ + AK++
Sbjct: 402 GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 461
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+++ G S N Y+ LI +G ++ A+R++ M+ +G D T+ L+ LC+
Sbjct: 462 CRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKA 521
Query: 519 TNLQAAFEVFNKSVNHDVMLARSI 542
+ A E F + + D +L ++
Sbjct: 522 GKVAEA-EEFMRCMTSDGILPNTV 544
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/478 (22%), Positives = 200/478 (41%), Gaps = 71/478 (14%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ + + ++Y+++L + A +L +K + D Y +I L +
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 279
Query: 136 QKAFSVF----------NEVKFNCED----------IGPEICNSLLAVLAS--------- 166
K + + NEV +N I ++ N +L+ S
Sbjct: 280 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 339
Query: 167 -DGYIDN-----ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKREN 220
DG+I ALKMF M +G+ S + +GV + C+NA+ L+ +R + N
Sbjct: 340 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFD--LARGFYMRMKRN 397
Query: 221 SMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
+ G + +I G CK ++EA +L+E+ PD + Y + F +G
Sbjct: 398 GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA 457
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+ ++ + ++G++P G+I I +G +
Sbjct: 458 KEIVCRIYRVGLSPN---------GIIYSTLIYNCCRMGCL------------------- 489
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
+ AI + MI +G T + L +LCK K E E + ++++ +
Sbjct: 490 ------KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
S++ +++ SG +A+ V EM + G P Y SL++ C+ LR A+K
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603
Query: 461 MFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ A + + YN L++ + G + A+ LF M+++ + PD+ TYTSL+ GLC++
Sbjct: 604 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 661
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 102/544 (18%), Positives = 221/544 (40%), Gaps = 46/544 (8%)
Query: 54 RVINPYLLTHHSLALGFFN-----WASQQPN----FTHSP--LSYHSILKSLSLSRQINA 102
R+I+P +T+++L GF N ASQ N F SP +++++++
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351
Query: 103 IDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLA 162
+ ++ +T Y ++ L + A + +K N +G ++
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411
Query: 163 VLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLG---QVLSMLDEVRKRE 219
L +G++D A+ + +EMS G++ + + I FC+ + +++ + V
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471
Query: 220 NSMINGSVI----------------AVLIIHG--------------FCKGKRVEEAFKVL 249
N +I ++I +I+ G CK +V EA + +
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531
Query: 250 DELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
+ P+ +++ + + G + V + K+G P Y + GL
Sbjct: 532 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTL 368
+ EA++ + + + +D + N L+ ++ S + A+ F M+++ +P T
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSA-NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
++L LC++ K+ + K A + + Y V + +G+ + ++M
Sbjct: 652 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 711
Query: 428 RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
G PD+ N++++ R + L +M NL TYNIL+ +S+ ++
Sbjct: 712 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 771
Query: 488 GALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
+ L+ +++ G+ PD T SL+ G+C+ L+ ++ + V + R + +
Sbjct: 772 TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 831
Query: 548 ISLC 551
C
Sbjct: 832 SKCC 835
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 112/523 (21%), Positives = 207/523 (39%), Gaps = 62/523 (11%)
Query: 79 NFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKA 138
F S + ++IL S+ S + ++ S LK++ KI D + + +I L + +K+
Sbjct: 153 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 212
Query: 139 FSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
+ K P I N++L G A+++ D M +GV+ + + I
Sbjct: 213 SYLMQ--KMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLI 270
Query: 197 WKFCENAKLGQVLSMLDEVRKR--------ENSMING----------------------- 225
C + ++ + +L ++RKR N++ING
Sbjct: 271 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 330
Query: 226 --SVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE------EFKLMGSV 277
V +I G +EA K+ + + P ++Y ++ + EF L
Sbjct: 331 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL---- 386
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV----SGKFTIDDDV 333
R ++ KR GV Y I GL C+ L E +V K ID D+
Sbjct: 387 -ARGFYMRMKRN-GVCVGRITYTGMIDGL------CKNGFLDEAVVLLNEMSKDGIDPDI 438
Query: 334 L--NALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
+ +ALI + ++A + G P S L N C+ E + +Y+
Sbjct: 439 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 498
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ + D ++NV+V+ LC +G++ EA ++ M G+ P+ ++ L+
Sbjct: 499 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 558
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
A ++D+M G TY L+ + G + A + ++ A D Y +
Sbjct: 559 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 618
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
LL +C+ NL A +F + V ++ ++ + LCR+
Sbjct: 619 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 661
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 118/556 (21%), Positives = 222/556 (39%), Gaps = 70/556 (12%)
Query: 45 DSLSPSLVAR--VINPYLLTHHSLALGFFNWASQQPNFTHSP--LSYHSILKSLSLSRQI 100
D + P+ V+ +IN Y + L F+ + H P +Y S+LK L +
Sbjct: 537 DGILPNTVSFDCLINGY--GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594
Query: 101 NAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE--ICN 158
+ LK + +D+ +Y ++ ++ + N KA S+F E+ I P+
Sbjct: 595 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQ--RSILPDSYTYT 652
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRG------VEFSTIGFGVFIWKFCENAKLGQVLSML 212
SL++ L G A+ E RG V ++ G+F K GQ + +
Sbjct: 653 SLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMF--------KAGQWKAGI 704
Query: 213 DEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEF 271
+ +N ++ +I G+ + ++E+ +L E+ + P+ Y I+ +
Sbjct: 705 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 764
Query: 272 KLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL-----------IVERRICEAKEL-- 318
V ++ + G+ P +LG+ I++ IC E+
Sbjct: 765 SKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDR 824
Query: 319 -------------GE---------VIVSGKFTIDDDVLNALIGSVSSIDPR--SAIVFFN 354
GE V+ S ++D D +A++ SV + + R + + +
Sbjct: 825 YTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMV-SVLNRNHRFQESRMVLH 883
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M ++G P L LC+ V + + A+ + + MV L G
Sbjct: 884 EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG 943
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ EA +++ M + L P ++ + +LM CC+ + A +L M G +L +YN
Sbjct: 944 KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1003
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG-LCQETNLQAAFEVFNKSVN 533
+LI+ G++ A L+ M G +ATTY +L+ G L +ET A +
Sbjct: 1004 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKD--- 1060
Query: 534 HDVMLARSILSTFMIS 549
+LAR +++ +S
Sbjct: 1061 ---LLARGFITSMSLS 1073
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 91/458 (19%), Positives = 181/458 (39%), Gaps = 39/458 (8%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
T +++ ++ SL + ++ + ++ + + I ++ + +I KAFS
Sbjct: 505 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 564
Query: 141 VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
VF+E+ SLL L G++ A K + T+ + + C
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 624
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFC-KGKRVEEAFKVLDELRIRECKP 259
++ L + +S+ E+ +R S++ S +I G C KGK V
Sbjct: 625 KSGNLAKAVSLFGEMVQR--SILPDSYTYTSLISGLCRKGKTV----------------- 665
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
IA + A+E + G+V +V+ Y F+ G+ +
Sbjct: 666 --IAI-LFAKEAEARGNVLPNKVM---------------YTCFVDGMFKAGQWKAGIYFR 707
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
E + + T D NA+I S + M + P L+T + L KR
Sbjct: 708 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 767
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
+Y+ + N D + + +V +C S L +++ +G++ D +
Sbjct: 768 KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 827
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLE 498
N L+ CC + A L M + G S + T + ++S + + + + H M +
Sbjct: 828 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 887
Query: 499 KGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
+G++P++ Y L+ GLC+ +++ AF V + + H +
Sbjct: 888 QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 925
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 183/433 (42%), Gaps = 80/433 (18%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL+ +A D + + ++M + G+ + + +FI FC ++L L++L ++ K
Sbjct: 81 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMK-- 138
Query: 220 NSMINGSVIAVL--IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ G I L +++GFC G R+ EA ++D++
Sbjct: 139 --LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV------------------------ 172
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
++G P T + + GL + EA L E +V D A+
Sbjct: 173 -----------EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 221
Query: 338 I-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN-LSKNLCKRNKSDELVEVYKVLSAND 395
I G +P A+ N M EKG++ + N + LCK D+ +++ +
Sbjct: 222 INGLCKRGEPDLALNLLNKM-EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
D+ +YN ++S LC GR +A ++ +M K ++PD+ F+N+L++A +E L A+
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 456 KLWDQMFAS------------------------------------GCSGNLKTYNILISK 479
KL+D+M S G GN TY LI
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
F + + + A +F M+ GV PD TY LL+GLC N++ A VF D+ L
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460
Query: 540 RSILSTFMISLCR 552
+T + +LC+
Sbjct: 461 IVTYTTMIEALCK 473
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 160/357 (44%), Gaps = 4/357 (1%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI 232
A+ + + M +G + + +G I C+ + L++L+++ K + VI I
Sbjct: 199 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK--GKIEADVVIYNTI 256
Query: 233 IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGV 292
I G CK K +++AF + +++ + KPD Y + G + +L + +
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
Query: 293 APRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV-LNALI-GSVSSIDPRSAI 350
P + I + E ++ EA++L + +V K D V N LI G +
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGM 376
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
F M ++G V T + L + D V+K + ++ D+ +YN+++ L
Sbjct: 377 EVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGL 436
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
C +G + A V + M+++ + D+ Y +++EA C+ + L+ + G N+
Sbjct: 437 CNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNV 496
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
TY ++S F G E A LF M E G P++ TY +L+ ++ + A+ E+
Sbjct: 497 VTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAEL 553
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/499 (20%), Positives = 204/499 (40%), Gaps = 51/499 (10%)
Query: 40 QLGLRDSLSPSLVARVINPYLLTHHSLALGFFN---------WASQQPNFTHSP--LSYH 88
QL L ++ ++ P ++T +SL GF + Q + P +++
Sbjct: 125 QLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 184
Query: 89 SILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFN 148
+++ L + + ++++++ V D Y +I L + A ++ N+++
Sbjct: 185 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG 244
Query: 149 CEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV 208
+ I N+++ L ++D+A +F++M +G++ + I C +
Sbjct: 245 KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA 304
Query: 209 LSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDEL-RIRECKPDFIAYRI 266
+L ++ ++ IN ++ +I F K ++ EA K+ DE+ + + C PD +AY
Sbjct: 305 SRLLSDMLEKN---INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 267 VAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGK 326
+ + F V E V ++ + G+ T Y I G R
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQAR---------------- 405
Query: 327 FTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
D +A + F M+ G P + T + L LC + +
Sbjct: 406 ------------------DCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALV 447
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
V++ + D D+ +Y M+ LC +G++ + + + + KG+ P+V Y ++M C
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
R+ L A L+ +M G N TYN LI G+ + L M G A DA+
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAS 567
Query: 507 TYTSLLEGLCQETNLQAAF 525
T+ L+ + + L +F
Sbjct: 568 TF-GLVTNMLHDGRLDKSF 585
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F M++ P++ S L + K NK D ++ + + + ++ +Y++ ++
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
+ C +L A ++ +M + G P + NSL+ C + + A L DQM G
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ T+ L+ + + A+ L M+ KG PD TY +++ GLC+ A +
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
NK + I +T + LC+
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCK 262
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 79/184 (42%)
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
NLS+ + + K D+ + ++ + + F + ++ ++S + + + ++M+
Sbjct: 45 NLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 104
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
G+ ++ Y+ + CR L A + +M G ++ T N L++ F I A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMIS 549
+ L M+E G PD T+T+L+ GL Q A + + V +
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224
Query: 550 LCRR 553
LC+R
Sbjct: 225 LCKR 228
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 182/398 (45%), Gaps = 7/398 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ +A D + + ++M G+ + + + I FC +++ L++L ++ K
Sbjct: 89 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E S++ S + ++G+C GKR+ +A ++D++ +PD I + + L
Sbjct: 149 LGYEPSIVTLSSL----LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E ++ + + G P Y + GL I A L + + K + + +
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 336 ALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I S+ A+ F M KG P + T S+L LC + + + +
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ ++N ++ G+L EA + EM ++ +DPD+ Y+SL+ C D L A
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K +++ M + C N+ TYN LI+ F + I+ + LF M ++G+ + TYT+L+ G
Sbjct: 385 KHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHG 444
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
Q + A VF + V+ V +T + LC+
Sbjct: 445 FFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Score = 115 bits (288), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 169/372 (45%), Gaps = 29/372 (7%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSV-IAVL 231
A+ + D M RG + + + +GV + C+ + ++L+ K E + I +V I
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN---KMEAAKIEANVVIYST 265
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV----------AEEFKLMGSVFERE 281
+I CK + ++A + E+ + +P+ I Y + ++ +L+ + ER+
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 282 VVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIG 339
+ P + I + E ++ EA++L + ++ K +ID D+ ++LI
Sbjct: 326 I----------NPNVVTFNALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTYSSLIN 373
Query: 340 SVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
D A F MI K P + T + L CK + DE VE+++ +S
Sbjct: 374 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+ +Y ++ + A V ++M G+ P++ YN+L++ C+ L A ++
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+ + S + TYNI+I + G++E LF ++ KGV PD Y +++ G C++
Sbjct: 494 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Query: 519 TNLQAAFEVFNK 530
+ A +F K
Sbjct: 554 GLKEEADALFRK 565
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 153/346 (44%), Gaps = 5/346 (1%)
Query: 164 LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
L G ID A + ++M +E + + + I C+ L++ E+ EN +
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM---ENKGV 291
Query: 224 NGSVIAVL-IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREV 282
+VI +I C +R +A ++L ++ R+ P+ + + + + F G + E E
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSV 341
+ + K + P Y I G + R+ EAK + E+++S + N LI G
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ + F M ++G V T + L + D V+K + ++ ++
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+YN ++ LC +G+L +A V + ++R ++P + YN ++E C+ + L+ +
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
G ++ YN +IS F G E A LF M E G PD+ T
Sbjct: 532 SLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 156/347 (44%), Gaps = 5/347 (1%)
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
Y ++ L + + AF++ N+++ + I ++++ L + D+AL +F EM
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKG 239
++GV + I + I C + +L ++ +R+ IN +V+ +I F K
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK---INPNVVTFNALIDAFVKE 343
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
++ EA K+ DE+ R PD Y + F + + E + + + P Y
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 300 REFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIE 358
I G +RI E EL + + LI G + D +A + F M+
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
G P + T + L LCK K ++ + V++ L + + +YN+M+ +C +G++ +
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
+ + + KG+ PDV YN+++ CR+ L A L+ +M G
Sbjct: 524 GWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 100/221 (45%)
Query: 332 DVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVL 391
D L + S+ AI F M++ +P++ + L + K K D ++ + + +
Sbjct: 52 DYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM 111
Query: 392 SANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLL 451
++ +YN++++ C ++ A ++ +M + G +P + +SL+ C +
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 452 RPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSL 511
A L DQM G + T+ LI + A+ L M+++G P+ TY +
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 512 LEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+ GLC+ ++ AF + NK + I ST + SLC+
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCK 272
Score = 33.9 bits (76), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/165 (17%), Positives = 70/165 (42%), Gaps = 13/165 (7%)
Query: 51 LVARVINPYLLTHHSLALGF------------FNWASQQPNFTHSPLSYHSILKSLSLSR 98
++++ P ++T+++L GF F SQ+ + ++Y +++ +R
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR-GLVGNTVTYTTLIHGFFQAR 449
Query: 99 QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN 158
+ V KQ+ + + + Y ++ L + +KA VF ++ + + N
Sbjct: 450 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 509
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
++ + G +++ +F +S +GV+ I + I FC
Sbjct: 510 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 177/382 (46%), Gaps = 7/382 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N L + +A + L + +M +G+ S + I FC KL S + ++ K
Sbjct: 92 NRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMK 151
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+VI +++G C RV EA +++D + KP I + L G V
Sbjct: 152 LGYE--PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKV 209
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
+ V++ + + G P Y + + + A EL + +D + +
Sbjct: 210 SDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269
Query: 338 IGSV---SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
I + S+D +A FN M KG + T + L C + D+ ++ + +
Sbjct: 270 IDGLCKDGSLD--NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ +++V++ G+LREA +++EM ++G+ P+ YNSL++ C+E+ L A
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++ D M + GC ++ T+NILI+ + + I+ L LF M +GV + TY +L++G
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 515 LCQETNLQAAFEVFNKSVNHDV 536
CQ L+ A ++F + V+ V
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRV 469
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 175/375 (46%), Gaps = 5/375 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L +G + +A+ + D M G + + + +G + C K GQ ++ +RK
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMC---KSGQTALAMELLRK 253
Query: 218 RENSMIN-GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E I +V +II G CK ++ AF + +E+ I+ K D I Y + F G
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNA 336
+ +L+ K ++P + I + E ++ EA +L + ++ + N+
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 337 LI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
LI G AI + MI KG P + T + L CK N+ D+ +E+++ +S
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ +YN +V C SG+L A + QEM + + PD+ Y L++ C L A
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL 493
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+++ ++ S ++ Y I+I +++ A LF ++ KGV DA Y ++ L
Sbjct: 494 EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISEL 553
Query: 516 CQETNLQAAFEVFNK 530
C++ +L A +F K
Sbjct: 554 CRKDSLSKADILFRK 568
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 177/390 (45%), Gaps = 15/390 (3%)
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
NEV + GP +L V+ G A+++ +M R ++ + + + I C++
Sbjct: 227 NEVTY-----GP-----VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
L ++ +E+ E +I +I GFC R ++ K+L ++ R+ P+
Sbjct: 277 GSLDNAFNLFNEM---EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ + ++ + F G + E + +LK+ + G+AP T Y I G E R+ EA ++ ++
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 322 IVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
++S D N LI G + + F M +G + T + L + C+ K
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
+ ++++ + + D+ SY +++ LC +G L +A + ++++ ++ D+ Y
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
++ C + A L+ + G + + YNI+IS+ + A LF M E+G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
APD TY L+ + + A E+ +
Sbjct: 574 HAPDELTYNILIRAHLGDDDATTAAELIEE 603
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/496 (22%), Positives = 202/496 (40%), Gaps = 53/496 (10%)
Query: 39 HQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSR 98
L RD LS LV + ++ L F + +P + + ++ + +++ ++
Sbjct: 52 RNLSYRDKLSSGLVG------IKADDAVDL-FRDMIQSRP--LPTVIDFNRLFSAIAKTK 102
Query: 99 QINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICN 158
Q + ++ KQ++ I +I + + AFS ++ + I N
Sbjct: 103 QYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFN 162
Query: 159 SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLD---EV 215
+LL L + + AL++ D M G + + I + C N K+ + ++D E
Sbjct: 163 TLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVET 222
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+ N + G V+ V+ CK + A ++L ++ R K D + Y I+ + G
Sbjct: 223 GFQPNEVTYGPVLNVM-----CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
S+ N + F E+ + G F D N
Sbjct: 278 SL------------------DNAFNLF----------------NEMEIKG-FKADIITYN 302
Query: 336 ALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
LIG + MI++ P + T S L + K K E ++ K +
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ +YN ++ C RL EA ++ M KG DPD+ +N L+ C+ + +
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+L+ +M G N TYN L+ F + G++E A +LF M+ + V PD +Y LL+G
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Query: 515 LCQETNLQAAFEVFNK 530
LC L+ A E+F K
Sbjct: 483 LCDNGELEKALEIFGK 498
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 219/491 (44%), Gaps = 26/491 (5%)
Query: 9 LATRISQAIISASNRTRPARKWTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLAL 68
L R+S+A+ K T + TL GL L +V + +L +
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNTLVN-GL------CLNGKVSDAVVLIDRMVET 222
Query: 69 GFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPS 128
GF QPN ++Y +L + S Q +L++++ I LD+ Y II
Sbjct: 223 GF------QPN----EVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 129 LIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFS 188
L + + AF++FNE++ N+L+ + G D+ K+ +M R + +
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 189 TIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKV 248
+ F V I F + KL + +L E+ +R + ++ +I GFCK R+EEA ++
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQR--GIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
+D + + C PD + + I+ + + + + ++ GV T Y + G
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVP-TLS 366
++ AK+L + +VS + D L+ G + + A+ F IEK ++ +
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFG-KIEKSKMELDIG 509
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
+ +C +K D+ +++ L D +YN+M+S LC L +A + ++M
Sbjct: 510 IYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM 569
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
+G PD YN L+ A +D A +L ++M +SG ++ T ++I+ S GE+
Sbjct: 570 TEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS-GEL 628
Query: 487 EGALRLFHNML 497
+ + F +ML
Sbjct: 629 DKS---FLDML 636
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 101/222 (45%), Gaps = 4/222 (1%)
Query: 331 DDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
D + + L+G I A+ F MI+ +PT+ + L + K + + ++ + K
Sbjct: 58 DKLSSGLVG----IKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ + + + ++M++ C +L A+ + ++ + G +PD +N+L+ C E
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
+ A +L D+M G L T N L++ G++ A+ L M+E G P+ TY
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
+L +C+ A E+ K ++ L S + LC+
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 194/407 (47%), Gaps = 17/407 (4%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ + D + + +M G+ F + I FC ++ LS+L ++ K
Sbjct: 89 NRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLK 148
Query: 218 ---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
+ + GS +++GFC+ RV +A ++D++ KPD +AY + +
Sbjct: 149 LGYEPDRVTIGS-----LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 203
Query: 275 GSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL 334
V + K+ + G+ P Y + GL R +A L ++ K T +
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 263
Query: 335 NALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
+AL+ + V + A F M+ P + T S+L LC ++ DE +++ ++ +
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 323
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
D+ SYN +++ C + R+ + + +EM ++GL + YN+L++ + +
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A++ + QM G S ++ TYNIL+ + GE+E AL +F +M ++ + D TYT+++
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443
Query: 514 GLCQETNLQAAFEVFN----KSVNHDVMLARSILSTFMISLCRRVLI 556
G+C+ ++ A+ +F K + D++ +T M LC + L+
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIV----TYTTMMSGLCTKGLL 486
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 95/203 (46%), Gaps = 4/203 (1%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F+ M++ P++ + L + K K D ++ + K + D+ ++N++++
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C ++ A ++ +M + G +PD SL+ CR + + A L D+M G
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF--- 525
++ YN +I + + A F + KG+ P+ TYT+L+ GLC + A
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 526 -EVFNKSVNHDVMLARSILSTFM 547
++ K + +V+ ++L F+
Sbjct: 249 SDMIKKKITPNVITYSALLDAFV 271
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%)
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+L +A + +M + P + +N L+ A + L +M G +L T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
I+I+ F ++ AL + ML+ G PD T SL+ G C+ + A + +K V
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/531 (22%), Positives = 219/531 (41%), Gaps = 43/531 (8%)
Query: 66 LALGFFNWASQ-QPNFTHSPLSYHSILKSLSLSRQI-NAIDSVLKQVKVNKITLDSSVYR 123
L LGF + + F +++ +LK L ++ +A+D VL+++ + Y
Sbjct: 103 LDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYN 162
Query: 124 FIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLAS---DGYIDNALKMFDEM 180
++ L +Q+A + + + + P S V+ +G D A + EM
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
RG+ + + I C+ + + + +L+ + K N ++ + I+HG+C
Sbjct: 223 LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK--NGVMPDCMTYNSILHGYCSSG 280
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+ +EA L ++R +PD + Y ++ + G E + K G+ P Y
Sbjct: 281 QPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYG 340
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---------------------- 338
+ G + + E L +++V D V + LI
Sbjct: 341 TLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 400
Query: 339 ---------GSVSSIDPRS-----AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDEL 384
G+V I +S A+++F MI++G P ++L LC NK +
Sbjct: 401 GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 460
Query: 385 VEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEA 444
E+ + + +N ++ C GR+ E+ + + M R G+ P+V YN+L+
Sbjct: 461 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLING 520
Query: 445 CCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPD 504
C + A KL M + G N TY+ LI+ + ++ +E AL LF M GV+PD
Sbjct: 521 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPD 580
Query: 505 ATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVL 555
TY +L+GL Q AA E++ + + S + + LC+ L
Sbjct: 581 IITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKL 631
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 178/422 (42%), Gaps = 8/422 (1%)
Query: 138 AFSVFNEV-KFNCEDIGPEICNS--LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
A S +N + + +++ P++C L+ G +D + +G I F
Sbjct: 68 AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP 127
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-- 252
+ C + + + ++ R E I +++ G C R +EA ++L +
Sbjct: 128 LLKGLCADKRTSDAMDIVLR-RMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMAD 186
Query: 253 -RIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
R PD ++Y V F G + + G+ P Y I L +
Sbjct: 187 DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQA 246
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
+ +A E+ +V D N+++ G SS P+ AI F M G P + T S
Sbjct: 247 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSL 306
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LCK + E +++ ++ ++ +Y ++ T G L E +G++ M R G
Sbjct: 307 LMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+ PD ++ L+ A ++ + A ++ +M G + N TY +I + G +E A+
Sbjct: 367 IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISL 550
F M+++G++P Y SL+ GLC + A E+ + ++ + L ++ + S
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH 486
Query: 551 CR 552
C+
Sbjct: 487 CK 488
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 184/426 (43%), Gaps = 50/426 (11%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
++A +FDE+ RG S G + ++ V R + +
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 231 LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER------EVVL 284
++I C+ R++ F L + + + D IA+ + L G ++ ++VL
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPL-----LKGLCADKRTSDAMDIVL 146
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS--GKFTIDDDVLNALI--GS 340
++ +LG P Y + GL E R EA EL ++ G + D V + G
Sbjct: 147 RRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGF 206
Query: 341 VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDM 400
D A ++ M+++G +P + T +++ LCK D+ +EV + N D
Sbjct: 207 FKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDC 266
Query: 401 ESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQ 460
+YN ++ C+SG+ +EA G +++M+ G++PDV Y+ LM+ C+ A+K++D
Sbjct: 267 MTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDS 326
Query: 461 MFASGCSGNLKTY-----------------------------------NILISKFSEVGE 485
M G + TY +ILI +++ G+
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK 386
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILST 545
++ A+ +F M ++G+ P+A TY +++ LC+ ++ A F + ++ + + ++
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 546 FMISLC 551
+ LC
Sbjct: 447 LIHGLC 452
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/486 (20%), Positives = 211/486 (43%), Gaps = 20/486 (4%)
Query: 58 PYLLTHHSLALGFFNWASQQPNFT--HSPL---------SYHSILKSLSLSRQINAIDSV 106
P ++++ ++ GFF ++ H L +Y+SI+ +L ++ ++ V
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEV 253
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNS--LLAVL 164
L + N + D Y I+ ++A K + + P++ L+ L
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLK--KMRSDGVEPDVVTYSLLMDYL 311
Query: 165 ASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMIN 224
+G A K+FD M+ RG++ +G + + L ++ +LD + + N +
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR--NGIHP 369
Query: 225 GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVL 284
+ ++I + K +V++A V ++R + P+ + Y V G V + +
Sbjct: 370 DHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 429
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI 344
++ G++P Y I GL + A+EL ++ ++ N++I S
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK- 488
Query: 345 DPR--SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
+ R + F M+ G P + T + L C K DE +++ + + + +
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
Y+ +++ C R+ +A + +EM+ G+ PD+ YN +++ + AK+L+ ++
Sbjct: 549 YSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 608
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
SG L TYNI++ + + AL++F N+ + +A T+ +++ L +
Sbjct: 609 ESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRND 668
Query: 523 AAFEVF 528
A ++F
Sbjct: 669 EAKDLF 674
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 194/454 (42%), Gaps = 21/454 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y+SIL S Q LK+++ + + D Y ++ L + +A +F+
Sbjct: 267 MTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDS 326
Query: 145 VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+ + PEI +LL A+ G + + D M G+ F + I + +
Sbjct: 327 MTK--RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384
Query: 203 AKLGQVLSMLDEVRKR---ENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
K+ Q + + ++R++ N++ G+VI +L CK RVE+A +++ P
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL-----CKSGRVEDAMLYFEQMIDEGLSP 439
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
I Y + E ++ + G+ T + I E R+ E+++L
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499
Query: 320 EVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKR 378
E++V + N LI G + A+ + M+ G P T S L CK
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKI 559
Query: 379 NKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFY 438
++ ++ + ++K + ++ D+ +YN+++ L + R A + + G ++S Y
Sbjct: 560 SRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY 619
Query: 439 NSLMEACCREDLLRPAKKLWDQMFASGCSGNLK----TYNILISKFSEVGEIEGALRLFH 494
N ++ C+ L A QMF + C +LK T+NI+I +VG + A LF
Sbjct: 620 NIILHGLCKNKLTDDAL----QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV 675
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
G+ P+ TY + E + + L+ ++F
Sbjct: 676 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLF 709
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 188/434 (43%), Gaps = 8/434 (1%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y ++L+ + + + +L + N I D V+ +I + + +A VF+++
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397
Query: 146 KFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKL 205
+ + +++ +L G +++A+ F++M G+ I + I C K
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Query: 206 GQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIR-ECKPDFIAY 264
+ ++ E+ R + ++ II CK RV E+ K+ EL +R KP+ I Y
Sbjct: 458 ERAEELILEMLDR--GICLNTIFFNSIIDSHCKEGRVIESEKLF-ELMVRIGVKPNVITY 514
Query: 265 RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVS 324
+ + L G + E +L +G+ P T Y I G R+ +A L + + S
Sbjct: 515 NTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMES 574
Query: 325 GKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
+ D N ++ G + +A + + E G LST + + LCK +D+
Sbjct: 575 SGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDD 634
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+++++ L D + ++N+M+ L GR EA + GL P+ Y + E
Sbjct: 635 ALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 694
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
+ LL +L+ M +GC+ + N ++ + + GEI A + EK +
Sbjct: 695 NIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSL 754
Query: 504 DATT---YTSLLEG 514
+A+T + LL G
Sbjct: 755 EASTASLFIDLLSG 768
>sp|O81908|PPR2_ARATH Pentatricopeptide repeat-containing protein At1g02060,
chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2
SV=2
Length = 710
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 193/475 (40%), Gaps = 84/475 (17%)
Query: 67 ALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126
L FF+W S + F+H S+ +L+ L +R +N V R +
Sbjct: 84 GLRFFDWVSNK-GFSHKEQSFFLMLEFLGRARNLN-------------------VARNFL 123
Query: 127 PSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVE 186
S+ + N C + NSL+ + G ++K+F M G+
Sbjct: 124 FSIERRSN-------------GCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGIS 170
Query: 187 FSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAF 246
S + F + + + G + DE+R R + S +I+GFCK V+EAF
Sbjct: 171 PSVLTFNSLLSILLKRGRTGMAHDLFDEMR-RTYGVTPDSYTFNTLINGFCKNSMVDEAF 229
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK--KRKLGVAPRTNDYREFIL 304
++ ++ + C PD + Y + + G V VL K+ V P Y +
Sbjct: 230 RIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVR 289
Query: 305 GLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT 364
G C +E+ E A++ F+ M+ +G P
Sbjct: 290 G------YCMKQEIDE----------------------------AVLVFHDMLSRGLKPN 315
Query: 365 LSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT----DMESYNVMVSFLCTSGRLREAY 420
T + L K L + ++ DE+ ++ ++ ND FT D ++N+++ C +G L A
Sbjct: 316 AVTYNTLIKGLSEAHRYDEIKDI--LIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAM 373
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF-------ASGCSGNLKTY 473
V QEM L PD + Y+ L+ C + A+ L++++F C Y
Sbjct: 374 KVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAY 433
Query: 474 NILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
N + G+ + A ++F ++++GV D +Y +L+ G C+E + A+E+
Sbjct: 434 NPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELL 487
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 39/220 (17%)
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
G P T + L CK + DE ++K + D+ +YN ++ LC +G+++ A
Sbjct: 204 GVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIA 263
Query: 420 YGVIQEMKRKGLD--PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+ V+ M +K D P+V Y +L+ C + + A ++ M + G N TYN LI
Sbjct: 264 HNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI 323
Query: 478 SKFSEV-------------------------------------GEIEGALRLFHNMLEKG 500
SE G ++ A+++F ML
Sbjct: 324 KGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMK 383
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLAR 540
+ PD+ +Y+ L+ LC A +FN+ +V+L +
Sbjct: 384 LHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGK 423
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 100/541 (18%), Positives = 204/541 (37%), Gaps = 54/541 (9%)
Query: 34 LEQTLHQLGLRDSLSPSLVARVINPYLLTHHSL------------ALGFFNWASQQPNFT 81
L QT+ Q+G I+P +LT +SL A F+ + T
Sbjct: 160 LFQTMKQMG-------------ISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVT 206
Query: 82 HSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSV 141
++++++ + ++ + K +++ D Y II L + + A +V
Sbjct: 207 PDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNV 266
Query: 142 FNEVKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+ + D+ P + + +L+ ID A+ +F +M RG++ + + + I
Sbjct: 267 LSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGL 326
Query: 200 CENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKP 259
E + ++ +L + + ++I C ++ A KV E+ + P
Sbjct: 327 SEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHP 386
Query: 260 DFIAYRIVAE------EFK----LMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVE 309
D +Y ++ EF L +FE+EV+L K +A N E+ L
Sbjct: 387 DSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEY---LCAN 443
Query: 310 RRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLS 369
+ +A+++ ++ + G + A M+ + VP L T
Sbjct: 444 GKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYE 503
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK-- 427
L L K ++ + + + + Y +++ +++ L E++ ++ M
Sbjct: 504 LLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEK 563
Query: 428 --RKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGE 485
R+ +D L + +E + L+D +G L L+ E +
Sbjct: 564 RIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYD-------NGYLVKMEELLGYLCENRK 616
Query: 486 IEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV---NHDVMLARSI 542
+ A L LEK D T +++EGLC+ AF ++N+ V NH + +
Sbjct: 617 LLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVV 676
Query: 543 L 543
L
Sbjct: 677 L 677
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 95/475 (20%), Positives = 184/475 (38%), Gaps = 101/475 (21%)
Query: 64 HSLALGFFNWASQ-QPNFTHSPLSYHSILKSLSLSRQINAI-----DSVLKQVKVNKITL 117
H++ G A+ PN +SY ++++ + ++I+ D + + +K N +T
Sbjct: 264 HNVLSGMLKKATDVHPNV----VSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTY 319
Query: 118 D------SSVYRFI-IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDG 168
+ S +R+ I ++ G N AF+ F P+ C N L+ G
Sbjct: 320 NTLIKGLSEAHRYDEIKDILIGGN--DAFTTF----------APDACTFNILIKAHCDAG 367
Query: 169 YIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVI 228
++D A+K+F EM + + + + V I C + + ++ +E+ ++E
Sbjct: 368 HLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKE--------- 418
Query: 229 AVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
VL+ GK ECKP AY + E G + E V ++
Sbjct: 419 -VLL------GKD--------------ECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLM 457
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSI-DPR 347
K GV + Y+ I G E + A EL +++ +F D + LI + I +
Sbjct: 458 KRGVQDPPS-YKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEAL 516
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE-------LVE-------------- 386
A M+ +P +T ++ L KR ++E ++E
Sbjct: 517 LAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVV 576
Query: 387 --------------VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
+ ++L N Y ME ++ +LC + +L +A+ ++ K
Sbjct: 577 RLLFSSAQKEKAFLIVRLLYDNGYLVKMEE---LLGYLCENRKLLDAHTLVLFCLEKSQM 633
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIE 487
D+ N+++E C+ A L++++ G L + +L + G+ E
Sbjct: 634 VDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWE 688
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/524 (21%), Positives = 225/524 (42%), Gaps = 53/524 (10%)
Query: 30 WTPLLEQTLHQLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHS 89
W P E TL L + P V V+ L + A+ +F W ++ H P SY+S
Sbjct: 48 WGPSAENTLSALSFKPQ--PEFVIGVLRR--LKDVNRAIEYFRWYERRTELPHCPESYNS 103
Query: 90 ILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNC 149
+L ++ R +A+D +L ++ V + ++ ++ ++ + V ++
Sbjct: 104 LLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFK 163
Query: 150 EDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVL 209
+L+ ++ + D L +F +M G E + F I F + ++ L
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYR---- 265
S+LDE+ + +S+ V+ + I F K +V+ A+K E+ KPD + Y
Sbjct: 224 SLLDEM--KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIG 281
Query: 266 IVAEEFKLMGSV--FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIV 323
++ + +L +V FE L+K R++ P T Y I+G
Sbjct: 282 VLCKANRLDEAVEMFEH---LEKNRRV---PCTYAYNTMIMGY----------------- 318
Query: 324 SGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDE 383
GS D A KG +P++ + + L K K DE
Sbjct: 319 ---------------GSAGKFD--EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
++V++ + D ++ +YN+++ LC +G+L A+ + M++ GL P+V N +++
Sbjct: 362 ALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
C+ L A ++++M C+ + T+ LI +VG ++ A +++ ML+
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFM 547
++ YTSL++ + +++ +N + +L+T+M
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYM 524
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 199/448 (44%), Gaps = 10/448 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y S++ L + +++ + + ++ N+ + Y +I +A+S+
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGV-EFSTIGFGVFIWKFCENA 203
+ N +L L G +D ALK+F+EM ST + + I C
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLST--YNILIDMLCRAG 391
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
KL + D ++K + +++ CK ++++EA + +E+ + C PD I
Sbjct: 392 KLDTAFELRDSMQKA--GLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEIT 449
Query: 264 YRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND--YREFILGLIVERRICEAKELGEV 321
+ + + +G V + V +K L RTN Y I R + ++ +
Sbjct: 450 FCSLIDGLGKVGRVDDAYKVYEKM--LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 322 IVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+++ + D +LN + + + +P F + + VP + S L L K
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
++E E++ + D +YN+++ C G++ +AY +++EMK KG +P V Y S
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+++ + D L A L+++ + N+ Y+ LI F +VG I+ A + +++KG
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ P+ T+ SLL+ L + + A F
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCF 715
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/493 (20%), Positives = 211/493 (42%), Gaps = 13/493 (2%)
Query: 61 LTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSS 120
+ H + L F Q+ + + + ++++ + ++++ S+L ++K + + D
Sbjct: 181 VNHSDMMLTLFQ-QMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 121 VYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEM 180
+Y I S + A+ F+E++ N S++ VL +D A++MF+ +
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGK 240
T + I + K + S+L+ R+R I + I+ K
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE--RQRAKGSIPSVIAYNCILTCLRKMG 357
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
+V+EA KV +E++ ++ P+ Y I+ + G + + +K G+ P
Sbjct: 358 KVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVN 416
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI---GSVSSIDPRSAIVFFNFMI 357
+ L +++ EA + E + T D+ +LI G V +D A + M+
Sbjct: 417 IMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVD--DAYKVYEKML 474
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+ ++L KN + ++ ++YK + + D++ N + + +G
Sbjct: 475 DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPE 534
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+ + +E+K + PD Y+ L+ + +L+ M GC + + YNI+I
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVN 533
F + G++ A +L M KG P TY S+++GL + L A+ +F +K +
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654
Query: 534 HDVMLARSILSTF 546
+V++ S++ F
Sbjct: 655 LNVVIYSSLIDGF 667
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/485 (21%), Positives = 203/485 (41%), Gaps = 47/485 (9%)
Query: 86 SYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEV 145
+Y++++ + + + S+L++ + Y I+ L + +A VF E+
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 146 KFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENA 203
K +D P + N L+ +L G +D A ++ D M G+ + + + + C++
Sbjct: 370 K---KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426
Query: 204 KLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIA 263
KL + +M +E+ + + +I G K RV++A+KV +++ +C+ + I
Sbjct: 427 KLDEACAMFEEMDYK--VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIV 484
Query: 264 YRIVAEEFKLMGSVFEREVVLK-------------------------------------K 286
Y + + F G + + K K
Sbjct: 485 YTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSID 345
R+ P Y I GLI E EL + +D N +I G
Sbjct: 545 ARRF--VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602
Query: 346 PRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNV 405
A M KG PT+ T ++ L K ++ DE +++ + ++ Y+
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
++ GR+ EAY +++E+ +KGL P++ +NSL++A + + + A + M
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
C+ N TY ILI+ +V + A + M ++G+ P +YT+++ GL + N+ A
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 526 EVFNK 530
+F++
Sbjct: 783 ALFDR 787
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 142/318 (44%), Gaps = 7/318 (2%)
Query: 210 SMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAE 269
+M +E++ R + + ++IHG K E +++ ++ + C D AY IV +
Sbjct: 538 AMFEEIKARR--FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVID 595
Query: 270 EFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTI 329
F G V + +L++ + G P Y I GL R+ EA L E S + +
Sbjct: 596 GFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 655
Query: 330 DDDVLNALI---GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVE 386
+ + ++LI G V ID A + +++KG P L T ++L L K + +E +
Sbjct: 656 NVVIYSSLIDGFGKVGRID--EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALV 713
Query: 387 VYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACC 446
++ + + +Y ++++ LC + +A+ QEM+++G+ P Y +++
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLA 773
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
+ + A L+D+ A+G + YN +I S A LF +G+
Sbjct: 774 KAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNK 833
Query: 507 TYTSLLEGLCQETNLQAA 524
T LL+ L + L+ A
Sbjct: 834 TCVVLLDTLHKNDCLEQA 851
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/429 (19%), Positives = 177/429 (41%), Gaps = 7/429 (1%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
T +++ S++ L +++ V +++ + +S VY +I + +
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 141 VFNE-VKFNCE-DIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
++ + + NC D+ ++ N+ + + G + MF+E+ R + + I
Sbjct: 504 IYKDMINQNCSPDL--QLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
+ + + ++ E + + ++I GFCK +V +A+++L+E++ + +
Sbjct: 562 LIKAGFANETYELFYSMK--EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
P + Y V + + + E ++ ++ + + Y I G RI EA +
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 319 GEVIVSGKFTIDDDVLNALIGS-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCK 377
E ++ T + N+L+ + V + + A+V F M E P T L LCK
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739
Query: 378 RNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSF 437
K ++ ++ + SY M+S L +G + EA + K G PD +
Sbjct: 740 VRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSAC 799
Query: 438 YNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNML 497
YN+++E + A L+++ G + KT +L+ + +E A + +
Sbjct: 800 YNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLR 859
Query: 498 EKGVAPDAT 506
E G A A
Sbjct: 860 ETGKARHAA 868
Score = 39.7 bits (91), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 69 GFFNWAS-QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIP 127
F W Q+ S +SY +++ L+ + I ++ + K N DS+ Y +I
Sbjct: 746 AFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIE 805
Query: 128 SLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNA 173
L G AFS+F E + I + C LL L + ++ A
Sbjct: 806 GLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 64/155 (41%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
Q T + +++S+L +L + +IN + +K K T + Y +I L + +
Sbjct: 685 QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFN 744
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
KAF + E++ ++++ LA G I A +FD G + + I
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL 231
+ S+ +E R+R + N + + +L
Sbjct: 805 EGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/479 (21%), Positives = 199/479 (41%), Gaps = 37/479 (7%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
Q T S ++ + +L+ I ++V ++ V + DSS Y+ ++ +
Sbjct: 174 QNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKI 233
Query: 136 QKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVF 195
Q+A + C +L L +G ++ A+ F +M G + + I F
Sbjct: 234 QEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSL 293
Query: 196 IWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDEL-RI 254
I C+ + Q ML+E+ + N +I G CK E+AF++ +L R
Sbjct: 294 IDGLCKKGSIKQAFEMLEEMVR--NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
KP+ Y + + + E++ + ++ G+ P N Y I G C+
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGH------CK 405
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN 374
A G A N M ++G +P + T + +
Sbjct: 406 AGSFGR----------------------------AYELMNLMGDEGFMPNIYTYNAAIDS 437
Query: 375 LCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
LCK++++ E E+ + D +Y +++ C + +A M + G + D
Sbjct: 438 LCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEAD 497
Query: 435 VSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFH 494
+ N L+ A CR+ ++ +++L+ + + G +TY +IS + + G+I+ AL+ FH
Sbjct: 498 MRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFH 557
Query: 495 NMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
NM G PD+ TY SL+ GLC+++ + A +++ ++ + T C+R
Sbjct: 558 NMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKR 616
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 177/401 (44%), Gaps = 4/401 (0%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N +L + G I+ A +FDEMS RGV + + + + + K+ + L + +
Sbjct: 186 NCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQ 245
Query: 218 RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
R I + LI+ C+ V A ++ KP+ I + + + GS+
Sbjct: 246 R--GFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSI 303
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG-EVIVSGKFTIDDDVLNA 336
+ +L++ + G P + I GL +A L +++ S + + +
Sbjct: 304 KQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTS 363
Query: 337 LIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAND 395
+IG D A + F+ M E+G P ++T + L CK E+ ++
Sbjct: 364 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEG 423
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ ++ +YN + LC R EAY ++ + GL+ D Y L++ C+++ + A
Sbjct: 424 FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQAL 483
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
+ +M +G +++ NILI+ F +++ + RLF ++ G+ P TYTS++
Sbjct: 484 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCY 543
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRRVLI 556
C+E ++ A + F+ H + + + LC++ ++
Sbjct: 544 CKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMV 584
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/540 (22%), Positives = 236/540 (43%), Gaps = 25/540 (4%)
Query: 2 TMRPATDLATRISQAIISASNRTRPARKWTPLLEQTLHQLGLR-DSLSPSLVARVINPYL 60
+ R + RI + + + + + W+ +L+ +R +SP + R+ +
Sbjct: 20 SFRSHLPITPRIKKLVSDTVSILKTQQNWSQILDDCFADEEVRFVDISPFVFDRIQDV-- 77
Query: 61 LTHHSLALGFFNWAS--QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLD 118
+ + F+W S ++ F + + S LK L+ R N I+ VL ++ + L
Sbjct: 78 ----EIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLT 133
Query: 119 SSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKM 176
++ + + + KA +++ V D P++ CNSLL++L + +A K+
Sbjct: 134 HEALSHVLHAYAESGSLSKAVEIYDYV-VELYDSVPDVIACNSLLSLLVKSRRLGDARKV 192
Query: 177 FDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGF 236
+DEM RG + + C K+ +V L E R + + N V II G+
Sbjct: 193 YDEMCDRGDSVDNYSTCILVKGMCNEGKV-EVGRKLIEGRWGKGCIPN-IVFYNTIIGGY 250
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
CK +E A+ V EL+++ P + + F G + +L + ++ G+ R
Sbjct: 251 CKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGL--RV 308
Query: 297 NDYREFILGLIVER-----RICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AI 350
+ + F+ +I + ++ A+ +G I++ D N LI + + A+
Sbjct: 309 SVW--FLNNIIDAKYRHGYKVDPAESIG-WIIANDCKPDVATYNILINRLCKEGKKEVAV 365
Query: 351 VFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFL 410
F + +KG +P + + L + CK + D ++ ++ D+ +Y +++ L
Sbjct: 366 GFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGL 425
Query: 411 CTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNL 470
SG + +A + ++ +G+ PD + YN LM C+ PAK L+ +M +
Sbjct: 426 VVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDA 485
Query: 471 KTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
Y LI F G+ + A ++F +EKGV D + ++++G C+ L A N+
Sbjct: 486 YVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNR 545
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 137/329 (41%), Gaps = 36/329 (10%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
+ + I + C+ K + LDE K+ +I ++ +I +CK K + A K+L +
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKK--GLIPNNLSYAPLIQAYCKSKEYDIASKLLLQ 405
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERR 311
+ R CKPD + Y I+ + G + + + K GV+P Y + GL R
Sbjct: 406 MAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGR 465
Query: 312 ICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNL 371
AK + F+ M+++ +P + L
Sbjct: 466 FLPAK----------------------------------LLFSEMLDRNILPDAYVYATL 491
Query: 372 SKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGL 431
+ DE +V+ + D+ +N M+ C SG L EA + M + L
Sbjct: 492 IDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL 551
Query: 432 DPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALR 491
PD Y+++++ ++ + A K++ M + C N+ TY LI+ F G+ + A
Sbjct: 552 VPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEE 611
Query: 492 LFHNMLEKGVAPDATTYTSLLEGLCQETN 520
F M + + P+ TYT+L+ L +E++
Sbjct: 612 TFKEMQLRDLVPNVVTYTTLIRSLAKESS 640
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 165/402 (41%), Gaps = 15/402 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+++ G I+NA +F E+ +G + FG I FC+ +L EV++
Sbjct: 244 NTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKE 303
Query: 218 RE---NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLM 274
R + ++I HG+ +V+ A + + + +CKPD Y I+
Sbjct: 304 RGLRVSVWFLNNIIDAKYRHGY----KVDPA-ESIGWIIANDCKPDVATYNILINRLCKE 358
Query: 275 GSVFEREVV---LKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDD 331
G ++EV L + K G+ P Y I + A +L + D
Sbjct: 359 G---KKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDI 415
Query: 332 DVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKV 390
LI G V S A+ +I++G P + + L LCK + ++
Sbjct: 416 VTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSE 475
Query: 391 LSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDL 450
+ + D Y ++ SG EA V KG+ DV +N++++ CR +
Sbjct: 476 MLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGM 535
Query: 451 LRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTS 510
L A ++M + TY+ +I + + ++ A+++F M + P+ TYTS
Sbjct: 536 LDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTS 595
Query: 511 LLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
L+ G C + + + A E F + D++ +T + SL +
Sbjct: 596 LINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAK 637
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 87/434 (20%), Positives = 164/434 (37%), Gaps = 66/434 (15%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKV--NKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
++Y ++ L +S ++ D+V +VK+ ++ D+++Y ++ L + A +F
Sbjct: 416 VTYGILIHGLVVSGHMD--DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLF 473
Query: 143 NEVKFNCEDIGPE--ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+E+ +I P+ + +L+ G D A K+F +GV+ + I FC
Sbjct: 474 SEMLD--RNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC 531
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ L + L+ ++ R E ++ II G+ K + + A K+ + +CKP+
Sbjct: 532 RSGMLDEALACMN--RMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPN 589
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ Y + F G E K+ + + P Y I L E E
Sbjct: 590 VVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLE------ 643
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
A+ ++ M+ VP T + L + K+
Sbjct: 644 ---------------------------KAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTS 676
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
KVL+ D +S ++ F MK G + YNS
Sbjct: 677 G-------KVLAEPDGSNHGQS-SLFSEFF-------------HRMKSDGWSDHAAAYNS 715
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL-FHNMLEK 499
+ C +++ A D+M G S + ++ ++ F VG + + F N+ EK
Sbjct: 716 ALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEK 775
Query: 500 GVAPDATTYTSLLE 513
G+ A Y+ +LE
Sbjct: 776 GLEV-AVRYSQVLE 788
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 120/505 (23%), Positives = 223/505 (44%), Gaps = 45/505 (8%)
Query: 49 PSL-VARVINPYLLTHHSLAL------GFFNWASQQPNFTHSPLSYHSILKSLSLSRQIN 101
PSL V V++ L+ H+ L+L FF + S QP F + +Y + + L++
Sbjct: 78 PSLSVHHVVD--LINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFLAVHEMFT 135
Query: 102 AIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIG--PEI--- 156
S+++ V V++ +S+ FI SL++ + T + + + D+G P+
Sbjct: 136 EAQSLIELV-VSRKGKNSASSVFI--SLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQC 192
Query: 157 ---------------CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
C +LL + + E+ G + F + + KFC+
Sbjct: 193 FRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCK 252
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ + DE+ KR + +V++ +I+G+CK ++E F++ ++ +PD
Sbjct: 253 EGNISDAQKVFDEITKRS---LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPD 309
Query: 261 FIAY----RIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
Y + +E K+ G+ + + K G+ P + I G I K
Sbjct: 310 VFTYSALINALCKENKMDGA----HGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMK 365
Query: 317 ELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
E + ++S D + N L+ G + D +A + MI +G P T + L
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C+ + +E+ K + N D ++ +V +C GR+ +A ++EM R G+ PD
Sbjct: 426 CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDD 485
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y +M+A C++ + KL +M + G ++ TYN+L++ ++G+++ A L
Sbjct: 486 VTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDA 545
Query: 496 MLEKGVAPDATTYTSLLEGLCQETN 520
ML GV PD TY +LLEG + N
Sbjct: 546 MLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 102/200 (51%)
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F+ + ++ PT+ + + L CK DE + + + D+ +Y+ +++ LC
Sbjct: 263 FDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCK 322
Query: 413 SGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKT 472
++ A+G+ EM ++GL P+ + +L+ R + K+ + +M + G ++
Sbjct: 323 ENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVL 382
Query: 473 YNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
YN L++ F + G++ A + M+ +G+ PD TYT+L++G C+ +++ A E+ +
Sbjct: 383 YNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMD 442
Query: 533 NHDVMLARSILSTFMISLCR 552
+ + L R S + +C+
Sbjct: 443 QNGIELDRVGFSALVCGMCK 462
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 1/217 (0%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKN-LCKRNKSDELVEVYKVLSAND 395
L+ + ++P I F I P + N+ N CK + +V+ ++
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 396 YFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAK 455
+ S+N +++ C G L E + + +M++ PDV Y++L+ A C+E+ + A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 456 KLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGL 515
L+D+M G N + LI S GEI+ + ML KG+ PD Y +L+ G
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 516 CQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
C+ +L AA + + + + + +T + CR
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR 427
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 89/182 (48%), Gaps = 4/182 (2%)
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
NL + K N + + Y + + ++ +N++++ C G + +A V E+ +
Sbjct: 209 GNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITK 268
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
+ L P V +N+L+ C+ L +L QM S ++ TY+ LI+ + +++G
Sbjct: 269 RSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDG 328
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSILS 544
A LF M ++G+ P+ +T+L+ G + + E + +K + D++L ++++
Sbjct: 329 AHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Query: 545 TF 546
F
Sbjct: 389 GF 390
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 200/433 (46%), Gaps = 12/433 (2%)
Query: 125 IIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSH 182
++ SL++ QK F+ V C+ + P++ + + G ++ A+K+F +M
Sbjct: 245 LLTSLVRANEFQKCCEAFDVV---CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 301
Query: 183 RGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR--ENSMINGSVIAVLIIHGFCKGK 240
GV + + F I + + +++ +R E ++I S++ + G + K
Sbjct: 302 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL----VKGLTRAK 357
Query: 241 RVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYR 300
R+ +A+ VL E+ + P+ I Y + + F GS+ + + G++ ++ Y
Sbjct: 358 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 417
Query: 301 EFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSS-IDPRSAIVFFNFMIEK 359
I G + A+ L + ++S F ++ ++I + S + SA+ F M+ +
Sbjct: 418 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 477
Query: 360 GRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREA 419
P L+ L LCK K + +E++ + D + N ++ LC +G+L EA
Sbjct: 478 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 537
Query: 420 YGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISK 479
+ + +E+ +G D YN+L+ CC + L A D+M G + TY+ILI
Sbjct: 538 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 597
Query: 480 FSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
+ ++E A++ + + G+ PD TY+ +++G C+ + E F++ ++ +V
Sbjct: 598 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 657
Query: 540 RSILSTFMISLCR 552
+ + + + CR
Sbjct: 658 TVVYNHLIRAYCR 670
Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 99/477 (20%), Positives = 194/477 (40%), Gaps = 36/477 (7%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++Y ++K L+ +++I VLK++ + VY +I S I+ + KA + +
Sbjct: 344 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL 403
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+ + N+L+ +G DNA ++ EM G + F I C +
Sbjct: 404 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM 463
Query: 205 LGQVLSMLDEVRKRENSMINGSVIAVLI-------------------------------- 232
L + E+ R N G ++ LI
Sbjct: 464 FDSALRFVGEMLLR-NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 522
Query: 233 --IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL 290
+HG C+ +++EAF++ E+ R C D ++Y + + E + L + K
Sbjct: 523 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 582
Query: 291 GVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSA 349
G+ P Y I GL ++ EA + + D + +I G +
Sbjct: 583 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 642
Query: 350 IVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSF 409
FF+ M+ K P ++L + C+ + +E+ + + + +Y ++
Sbjct: 643 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 702
Query: 410 LCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGN 469
+ R+ EA + +EM+ +GL+P+V Y +L++ + + + L +M + N
Sbjct: 703 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 762
Query: 470 LKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
TY ++I ++ G + A RL + M EKG+ PD+ TY + G ++ + AF+
Sbjct: 763 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 93/197 (47%)
Query: 359 KGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLRE 418
KG P + + CK K +E V+++ + ++ ++N ++ L GR E
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 326
Query: 419 AYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILIS 478
A+ ++M +G++P + Y+ L++ R + A + +M G N+ YN LI
Sbjct: 327 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 386
Query: 479 KFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVML 538
F E G + A+ + M+ KG++ ++TY +L++G C+ A + + ++ +
Sbjct: 387 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 446
Query: 539 ARSILSTFMISLCRRVL 555
+ ++ + LC ++
Sbjct: 447 NQGSFTSVICLLCSHLM 463
Score = 39.7 bits (91), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QPN + Y+ ++++ S +++ + + +K I+ +S+ Y +I + +
Sbjct: 655 QPN----TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 710
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALK---MFDEMSHRGVEFSTIGFG 193
+A +F E++ E + P + + A++ G + +K + EM + V + I +
Sbjct: 711 EAKLLFEEMRM--EGLEPNVFH-YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 767
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
V I + + + + +L+E+R E ++ S+ I+G+ K V EAFK DE
Sbjct: 768 VMIGGYARDGNVTEASRLLNEMR--EKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 165/362 (45%), Gaps = 9/362 (2%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-L 231
A+ + D M RG + + + +GV + C+ L++L+ K E + I V+
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLN---KMEAAKIEADVVIFNT 265
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
II CK + V++A + E+ + +P+ + Y + G + +L +
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSSIDP-RS 348
+ P + I + E + EA++L + ++ K +ID D+ N+L+ D
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMI--KRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A F FM+ K P + T + L K CK + ++ E+++ +S D +Y ++
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
L G A V ++M G+ PD+ Y+ L++ C L A +++D M S
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ Y +I + G+++ LF ++ KGV P+ TY +++ GLC + LQ A+ +
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 529 NK 530
K
Sbjct: 564 KK 565
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 185/433 (42%), Gaps = 42/433 (9%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ +A D + + ++M + + + I FC +++ L++L ++ K
Sbjct: 89 NKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E S++ S + ++G+C GKR+ +A ++D++ +PD I + + L
Sbjct: 149 LGYEPSIVTLSSL----LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E ++ + + G P Y + GL A L + + K D + N
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
Query: 336 ALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I S+ A+ F M KG P + T S+L LC + + ++ +
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ ++N ++ G+ EA + +M ++ +DPD+ YNSL+ C D L A
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEV------------------------------- 483
K++++ M + C ++ TYN LI F +
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Query: 484 ----GEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLA 539
G+ + A ++F M+ GV PD TY+ LL+GLC L+ A EVF+ ++ L
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 504
Query: 540 RSILSTFMISLCR 552
I +T + +C+
Sbjct: 505 IYIYTTMIEGMCK 517
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 113/517 (21%), Positives = 217/517 (41%), Gaps = 68/517 (13%)
Query: 31 TPLLEQTLHQLGLRDSLSPSLVARVIN----PYLLTHHSLALGFF--NWASQ-------- 76
+ LL H G R S + +LV +++ P +T +L G F N AS+
Sbjct: 159 SSLLNGYCH--GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 77 -----QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQ 131
QPN ++Y ++ L + ++L +++ KI D ++ II SL +
Sbjct: 217 VQRGCQPNL----VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 272
Query: 132 GKNTQKAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFST 189
++ A ++F E++ + I P + +SL++ L S G +A ++ +M + + +
Sbjct: 273 YRHVDDALNLFKEME--TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 190 IGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKV 248
+ F I F + K + + D++ KR I+ + +++GFC R+++A ++
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRS---IDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 249 LDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIV 308
+ + ++C PD + Y + + F V + + ++ G+ T Y I GL
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 309 ERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTL 368
+ D +A F M+ G P + T
Sbjct: 448 DG----------------------------------DCDNAQKVFKQMVSDGVPPDIMTY 473
Query: 369 SNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKR 428
S L LC K ++ +EV+ + ++ D+ Y M+ +C +G++ + + + +
Sbjct: 474 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 533
Query: 429 KGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEG 488
KG+ P+V YN+++ C + LL+ A L +M G N TYN LI G+
Sbjct: 534 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAA 593
Query: 489 ALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+ L M DA+T L+ + + L +F
Sbjct: 594 SAELIREMRSCRFVGDAST-IGLVANMLHDGRLDKSF 629
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 200/470 (42%), Gaps = 16/470 (3%)
Query: 65 SLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRF 124
SLAL + + S ++ S+L ++I+ +++ Q+ D+ +
Sbjct: 137 SLALALLG-KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 125 IIPSLIQGKNTQKAFSVFNE-VKFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMS 181
+I L +A ++ + V+ C+ P + + V L G D AL + ++M
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQ---PNLVTYGVVVNGLCKRGDTDLALNLLNKME 252
Query: 182 HRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCK 238
+E + F I C+ + L++ E+ R N + S+I+ L +G
Sbjct: 253 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG--- 309
Query: 239 GKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTND 298
R +A ++L ++ ++ P+ + + + + F G E E + K + P
Sbjct: 310 --RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Query: 299 YREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMI 357
Y + G + R+ +AK++ E +VS D N LI G S F M
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 358 EKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLR 417
+G V T + L + L D +V+K + ++ D+ +Y++++ LC +G+L
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 487
Query: 418 EAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILI 477
+A V M++ + D+ Y +++E C+ + L+ + G N+ TYN +I
Sbjct: 488 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Query: 478 SKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
S ++ A L M E G P++ TY +L+ ++ + A+ E+
Sbjct: 548 SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAEL 597
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 93/204 (45%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
AI F M++ +P++ + L + K K D ++ + + + + + +YN++++
Sbjct: 69 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 128
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C ++ A ++ +M + G +P + +SL+ C + A L DQM G
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ T+ LI + A+ L M+++G P+ TY ++ GLC+ + A +
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 248
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
NK + I +T + SLC+
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCK 272
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 16/170 (9%)
Query: 384 LVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLME 443
+VE K+LSA M+ ++V++S RL +G+ YN L+
Sbjct: 85 IVEFNKLLSA---IAKMKKFDVVISLGEKMQRLEIVHGLYT-------------YNILIN 128
Query: 444 ACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAP 503
CR + A L +M G ++ T + L++ + I A+ L M+E G P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 504 DATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
D T+T+L+ GL A + ++ V + LC+R
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%)
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+L +A G+ M + P + +N L+ A + L ++M L TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSV 532
ILI+ F +I AL L M++ G P T +SLL G C + A + ++ V
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 121/515 (23%), Positives = 219/515 (42%), Gaps = 64/515 (12%)
Query: 31 TPLLEQTLHQLGLRDS--LSPSLVARVINPYLLTHHSLALGFF--NWASQ---------- 76
+ LL H + D+ L +V P T +L G F N AS+
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 77 ---QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGK 133
QP+ ++Y +++ L I+ S+LK+++ KI D +Y II L + K
Sbjct: 217 RGCQPDL----VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK 272
Query: 134 NTQKAFSVFNEVKFNCEDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+ A ++F E+ + + I P++ +SL++ L + G +A ++ +M R + + +
Sbjct: 273 HMDDALNLFTEM--DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVL-IIHGFCKGKRVEEAFKVLD 250
F I F + KL + + DE+ KR I+ + +I+GFC R++EA + +
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRS---IDPDIFTYSSLINGFCMHDRLDEAKHMFE 387
Query: 251 ELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVER 310
+ ++C P+ + Y + + F V E + ++ + G+ T Y I G R
Sbjct: 388 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Query: 311 RICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSN 370
D +A + F M+ G P + T +
Sbjct: 448 ----------------------------------DCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 371 LSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKG 430
L LCK K + + V++ L + D+ +YN+M+ +C +G++ + + + + KG
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 431 LDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGAL 490
+ P+V YN+++ CR+ A L +M G N TYN LI G+ E +
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 593
Query: 491 RLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
L M G A DA+T L+ + + L +F
Sbjct: 594 ELIKEMRSCGFAGDAST-IGLVTNMLHDGRLDKSF 627
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 181/401 (45%), Gaps = 13/401 (3%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ +A + + + ++M G+ + +FI FC ++L L++L ++ K
Sbjct: 87 NKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK 146
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E ++ S + ++G+C KR+ +A ++D++ KPD + + L
Sbjct: 147 LGYEPDIVTLSSL----LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E ++ + + G P Y + GL I A L + + GK D + N
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 336 ALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I + A+ F M KG P + T S+L LC + + + +
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ +++ ++ G+L EA + EM ++ +DPD+ Y+SL+ C D L A
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K +++ M + C N+ TY+ LI F + +E + LF M ++G+ + TYT+L+ G
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 515 LCQETNLQAAFEVFNKSVN---HDVMLARSILSTFMISLCR 552
Q + A VF + V+ H +L +IL + LC+
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNIL---LDGLCK 480
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 166/362 (45%), Gaps = 9/362 (2%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-L 231
A+ + D+M RG + + +G + C+ + LS+L +K E I V+
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL---KKMEKGKIEADVVIYNT 263
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
II G CK K +++A + E+ + +PD Y + G + +L +
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALIGSVSSIDP-RS 348
+ P + I + E ++ EA++L + ++ K +ID D+ ++LI D
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A F MI K P + T S L K CK + +E +E+++ +S + +Y ++
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
+ A V ++M G+ P++ YN L++ C+ L A +++ + S
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
++ TYNI+I + G++E LF N+ KGV+P+ Y +++ G C++ + + A +
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 529 NK 530
K
Sbjct: 562 KK 563
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 93/204 (45%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F M++ P++ + L + K NK + ++ + + + D+ +Y++ ++
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C +L A V+ +M + G +PD+ +SL+ C + A L DQM G
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ T+ LI + A+ L M+++G PD TY +++ GLC+ ++ A +
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
K + I +T + LC+
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCK 270
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 84/215 (39%), Gaps = 21/215 (9%)
Query: 360 GRVPTLSTLSNLSKNLCKRNK------------SDELVEVYKVLSANDYFTDME------ 401
G PT+ + NL + C + L ++ KV A D F DM
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFP 81
Query: 402 ---SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+N ++S + + + ++M+ G+ D+ Y+ + CR L A +
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M G ++ T + L++ + I A+ L M+E G PD T+T+L+ GL
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
A + ++ V T + LC+R
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 100/469 (21%), Positives = 216/469 (46%), Gaps = 37/469 (7%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
L L +++W + + + S +L SL+ +++ + I S L
Sbjct: 83 LCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLD----------------- 125
Query: 126 IPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNA-----LKMFDEM 180
++ + + S+F+ + C+++ NS++A + Y +N+ + F
Sbjct: 126 --GFVRNGSDHQVHSIFHAISM-CDNV---CVNSIIADMLVLAYANNSRFELGFEAFKRS 179
Query: 181 SHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKG 239
+ G + S + + + + V + E+ +R+ I +V ++I+ CK
Sbjct: 180 GYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRK---IQPNVFTFNVVINALCKT 236
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS---VFEREVVLKKKRKLGVAPRT 296
++ +A V++++++ C P+ ++Y + + + +G +++ + VLK+ + V+P
Sbjct: 237 GKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNL 296
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNF 355
+ I G + + + ++ + ++ + N+LI + + S AI +
Sbjct: 297 TTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDK 356
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M+ G P L T + L CK + E ++++ + YN+++ C G+
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ + + + +EM+R+G+ PDV YN L+ CR + AKKL+DQ+ + G +L T++I
Sbjct: 417 IDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHI 475
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
L+ + GE A L M + G+ P TY +++G C+E NL+AA
Sbjct: 476 LMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 177/394 (44%), Gaps = 24/394 (6%)
Query: 151 DIGPEICNSLLAVLASDGYIDNALKMFDEMSH---RGVEFSTIGFGVFIWKFCENAKLGQ 207
++ P++C + L + I +L++ ++ H +S I F+ F N Q
Sbjct: 78 ELDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIR--SFLDGFVRNGSDHQ 135
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLD-------ELRIRECKPD 260
V S+ + +N +N S+IA +++ + R E F+ +L CKP
Sbjct: 136 VHSIFHAISMCDNVCVN-SIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPL 194
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
IA ++ E + E V K+ + + P + I L ++ +A+++ E
Sbjct: 195 MIA--LLKEN-----RSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVME 247
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRS----AIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
+ + + N LI + A M+E P L+T + L
Sbjct: 248 DMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFW 307
Query: 377 KRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVS 436
K + ++V+K + D ++ SYN +++ LC G++ EA + +M G+ P++
Sbjct: 308 KDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLI 367
Query: 437 FYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNM 496
YN+L+ C+ D+L+ A ++ + G + YN+LI + ++G+I+ L M
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 497 LEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+G+ PD TY L+ GLC+ N++AA ++F++
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 182/428 (42%), Gaps = 62/428 (14%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQ-GKNT 135
QPN +++ ++ +L + ++N V++ +KV + + Y +I + G N
Sbjct: 220 QPNV----FTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNG 275
Query: 136 Q--KAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIG 191
+ KA +V E+ N D+ P + N L+ D + ++K+F EM + V+ + I
Sbjct: 276 KMYKADAVLKEMVEN--DVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLI-----IHGFCKGKRVEEAF 246
+ I C K+ + +SM D+ M++ V LI I+GFCK ++EA
Sbjct: 334 YNSLINGLCNGGKISEAISMRDK-------MVSAGVQPNLITYNALINGFCKNDMLKEAL 386
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
+ ++ + P Y ++ + + +G + + + ++ + G+ P Y I GL
Sbjct: 387 DMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
I AK+L F+ + KG +P L
Sbjct: 447 CRNGNIEAAKKL----------------------------------FDQLTSKG-LPDLV 471
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T L + C++ +S + + K +S +YN+++ C G L+ A + +M
Sbjct: 472 TFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM 531
Query: 427 -KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVG- 484
K + L +V+ YN L++ ++ L A L ++M G N TY I+ + + G
Sbjct: 532 EKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGF 591
Query: 485 --EIEGAL 490
+IEG L
Sbjct: 592 VPDIEGHL 599
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/490 (22%), Positives = 218/490 (44%), Gaps = 36/490 (7%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
F + +++ +LK L + + S+L++++ N + D Y +I +GK +KA
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKAL 197
Query: 140 SVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKF 199
+ NE+K + L+ G +D A+ EM G+E + + I F
Sbjct: 198 ELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGF 257
Query: 200 CENAKLGQVLSMLDEVRKRE--------NSMING-----------SVIAVLI-------- 232
C+ +L + ++ DEV +R N++I G + +I
Sbjct: 258 CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNV 317
Query: 233 ------IHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKK 286
I G C + +EA ++L+ + ++ +P+ + Y I+ + G V + +++
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVEL 377
Query: 287 KRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL--NALI-GSVSS 343
+K P Y + GL + + EA +L +++ D DV+ NALI G
Sbjct: 378 MKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKE 437
Query: 344 IDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESY 403
A+ ++ ++EK T + L + K ++ +E++K +S + + ++Y
Sbjct: 438 NRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY 497
Query: 404 NVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFA 463
M+ C +G L A G++ +M+ L P V YN L+ + C+E L A +L+++M
Sbjct: 498 TAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQR 557
Query: 464 SGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQA 523
++ ++NI+I + G+I+ A L M G++PD TY+ L+ + L
Sbjct: 558 DNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDE 617
Query: 524 AFEVFNKSVN 533
A F+K V+
Sbjct: 618 AISFFDKMVD 627
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 175/389 (44%), Gaps = 52/389 (13%)
Query: 180 MSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKG 239
M RG F+ + + C N + G+ +S+L E+R+ NS++ +I GFC+G
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRR--NSLMPDVFSYNTVIRGFCEG 190
Query: 240 KRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDY 299
K +E+A ++ +E++ C + + I+ + F G + E LK+ + +G+ Y
Sbjct: 191 KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVY 250
Query: 300 REFILGLIVERRICEAKEL--GEVIVSGKFTIDDD----VLNALIGSVSSIDP-RSAIVF 352
I G C+ EL G+ + D N LI + + A
Sbjct: 251 TSLIRGF------CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 353 FNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCT 412
F FMIE+G P + T + L LC K+ E +++ ++ D + +YN++++ LC
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 413 SGRLREAYGVIQEMKRK--------------GL-----------------------DPDV 435
G + +A +++ MK++ GL DPDV
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDV 424
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
YN+L+ C+E+ L A ++D + +G+ T NIL++ + G++ A+ L+
Sbjct: 425 ISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAA 524
+ + + ++ TYT++++G C+ L A
Sbjct: 485 ISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 102/199 (51%)
Query: 337 LIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
L G +++ A+ M +P + + + + + C+ + ++ +E+ + +
Sbjct: 149 LKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC 208
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
+ ++ +++ C +G++ EA G ++EMK GL+ D+ Y SL+ C L K
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKA 268
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
L+D++ G S TYN LI F ++G+++ A +F M+E+GV P+ TYT L++GLC
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 517 QETNLQAAFEVFNKSVNHD 535
+ A ++ N + D
Sbjct: 329 GVGKTKEALQLLNLMIEKD 347
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 103/509 (20%), Positives = 208/509 (40%), Gaps = 75/509 (14%)
Query: 81 THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFS 140
+ S +++ ++ + + +++ LK++K + D VY +I + +
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKA 268
Query: 141 VFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
+F+EV + N+L+ G + A ++F+ M RGV + + I C
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
K + L +L+ + +++ +V +II+ CK V +A ++++ ++ R +PD
Sbjct: 329 GVGKTKEALQLLNLMIEKDEE--PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD 386
Query: 261 FIAYRIVAEEFKLMGSVFE--REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKEL 318
I Y I+ G + E + + L K P Y I GL E R+ +A ++
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDI 446
Query: 319 GEVIVSGKFTIDDDVLNALIGS----------------------VSSIDPRSAIV----- 351
+++V D N L+ S V + D +A++
Sbjct: 447 YDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCK 506
Query: 352 --FFNF---MIEKGRV----PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES 402
N ++ K RV P++ + L +LCK D+ +++ + ++ F D+ S
Sbjct: 507 TGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVS 566
Query: 403 YNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMF 462
+N+M+ +G ++ A ++ M R GL PD+ Y+
Sbjct: 567 FNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSK---------------------- 604
Query: 463 ASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQ 522
LI++F ++G ++ A+ F M++ G PDA S+L+ +
Sbjct: 605 -------------LINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETD 651
Query: 523 AAFEVFNKSVNHDVMLARSILSTFMISLC 551
E+ K V+ D++L + + T M +C
Sbjct: 652 KLTELVKKLVDKDIVLDKELTCTVMDYMC 680
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 95/196 (48%)
Query: 335 NALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
N + V S + A F+ M+E +LS L + + K+ V ++
Sbjct: 77 NLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKR 136
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ ++ ++N+++ LC + +A +++EM+R L PDV YN+++ C L A
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
+L ++M SGCS +L T+ ILI F + G+++ A+ M G+ D YTSL+ G
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 515 LCQETNLQAAFEVFNK 530
C L +F++
Sbjct: 257 FCDCGELDRGKALFDE 272
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%)
Query: 355 FMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSG 414
M+++G + + L K LC+ + + V + + + N D+ SYN ++ C
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
L +A + EMK G + + L++A C+ + A +M G +L Y
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
LI F + GE++ LF +LE+G +P A TY +L+ G C+ L+ A E+F
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 203/484 (41%), Gaps = 48/484 (9%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S ++Y I+ S + A D + K TL++S+Y II + Q N ++A ++
Sbjct: 378 SLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALV 437
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYI-----DNALKMFDEMSHRGVEFSTIGFGVFIW 197
E++ D I ++++ DGY L +F + G + + +G I
Sbjct: 438 REMEEEGIDAPIAIYHTMM-----DGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLIN 492
Query: 198 KFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIREC 257
+ + K+ + L + V K E N + ++I+GF K K AF V +++
Sbjct: 493 LYTKVGKISKALE-VSRVMKEEGVKHNLKTYS-MMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 258 KPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKL--------------------------- 290
KPD I Y + F MG++ +K+ +KL
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Query: 291 --------GVAPRTNDYREFILGLIVERRICEAKE-LGEVIVSGKFTIDDDVLNALIGSV 341
G P + + I GL+ +R++ +A E L E+ ++G + + G
Sbjct: 611 VFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYA 670
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
S D A +F + +G + T L K CK + + V K +SA + +
Sbjct: 671 SVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 730
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
YN+++ G + EA +IQ+MK++G+ PD+ Y S + AC + + A + ++M
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM 790
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
A G N+KTY LI ++ E AL + M G+ PD Y LL L ++
Sbjct: 791 EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASI 850
Query: 522 QAAF 525
A+
Sbjct: 851 AEAY 854
Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 155/373 (41%), Gaps = 3/373 (0%)
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
I SL+ A +D AL +M G+E S + + V + F + DE
Sbjct: 346 IYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEA 405
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
KR + +N S+ II+ C+ +E A ++ E+ Y + + + ++
Sbjct: 406 -KRIHKTLNASIYGK-IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVA 463
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
+ VV K+ ++ G P Y I +I +A E+ V+ + +
Sbjct: 464 DEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYS 523
Query: 336 ALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I G V D +A F M+++G P + +N+ C D ++ K +
Sbjct: 524 MMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL 583
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
+ ++ ++ SG +R + V M+R G P V +N L+ + + A
Sbjct: 584 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKA 643
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
++ D+M +G S N TY ++ ++ VG+ A F + +G+ D TY +LL+
Sbjct: 644 VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKA 703
Query: 515 LCQETNLQAAFEV 527
C+ +Q+A V
Sbjct: 704 CCKSGRMQSALAV 716
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/381 (19%), Positives = 153/381 (40%), Gaps = 44/381 (11%)
Query: 192 FGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDE 251
FG+ + + + + + +R R + S I +IH + G+ ++EA + +
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRAR--GITPTSRIYTSLIHAYAVGRDMDEALSCVRK 369
Query: 252 LRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLI---- 307
++ + + Y ++ F G + + +++ + Y + I
Sbjct: 370 MKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCN 429
Query: 308 VERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLST 367
+ER +E+ E + I +++ G D + +V F + E G PT+ T
Sbjct: 430 MERAEALVREMEEEGIDAPIAIYHTMMD---GYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 368 LSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMK 427
L K K + +EV +V+ ++++Y++M++ A+ V ++M
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 428 RKGLDPDVSFYNSLMEACC-----------------------------------REDLLR 452
++G+ PDV YN+++ A C + +R
Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 606
Query: 453 PAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLL 512
+ +++D M GC + T+N LI+ E ++E A+ + M GV+ + TYT ++
Sbjct: 607 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 666
Query: 513 EGLCQETNLQAAFEVFNKSVN 533
+G + AFE F + N
Sbjct: 667 QGYASVGDTGKAFEYFTRLQN 687
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/317 (18%), Positives = 123/317 (38%), Gaps = 14/317 (4%)
Query: 88 HSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKF 147
H KS + R + D + + V + + +I L++ + +KA + +E+
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTV----HTFNGLINGLVEKRQMEKAVEILDEMTL 652
Query: 148 NCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
++ AS G A + F + + G++ + + C++ ++
Sbjct: 653 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 712
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
L++ E+ R ++ S + ++I G+ + V EA ++ +++ KPD Y
Sbjct: 713 ALAVTKEMSAR--NIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSF 770
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL----IVERRICEAKELGEVIV 323
G + +++ LGV P Y I G + E+ + +E+ + +
Sbjct: 771 ISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 830
Query: 324 SGKFTIDDDVLNALIGSVSSIDP---RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
+ +L +L+ S + + M+E G + + T + SK LCK
Sbjct: 831 KPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEA 890
Query: 381 S-DELVEVYKVLSANDY 396
S EL E + D+
Sbjct: 891 SGGELTETLQKTFPPDW 907
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 447 REDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDAT 506
R D+ R A++ +++M A G + + Y LI ++ +++ AL M E+G+
Sbjct: 322 RGDMHR-ARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLV 380
Query: 507 TYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
TY+ ++ G + + +AA F+++ L SI + + C+
Sbjct: 381 TYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/506 (23%), Positives = 216/506 (42%), Gaps = 66/506 (13%)
Query: 42 GLRDSLSPSLVARVI----NPYLLTHHSLALGFF--NWASQ-------------QPNFTH 82
G R S + SLV +++ P T ++L G F N AS+ QP+
Sbjct: 164 GNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDL-- 221
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
++Y ++ L I+ S+LK+++ KI +Y II +L KN A ++F
Sbjct: 222 --VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
E+ + + I P + NSL+ L + G +A ++ +M R + + + F I F
Sbjct: 280 TEM--DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGSVIAVL-IIHGFCKGKRVEEAFKVLDELRIRECKP 259
+ KL + + DE+ KR I+ + +I+GFC R++EA + + + ++C P
Sbjct: 338 KEGKLVEAEKLYDEMIKRS---IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394
Query: 260 DFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELG 319
+ + Y + + F V E + ++ + G+ T Y I G + R C+
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF-QARECD----- 448
Query: 320 EVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+A + F M+ G +P + T S L LC
Sbjct: 449 ----------------------------NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
K + + V++ L + D+ +YN+M+ +C +G++ + + + + KG+ P+V Y
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
++M CR+ L A L+ +M G + TYN LI G+ + L M
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 600
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAF 525
DA+T L+ + + L +F
Sbjct: 601 RFVGDAST-IGLVTNMLHDGRLDKSF 625
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 199/448 (44%), Gaps = 11/448 (2%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++ +S+L +I+ S++ Q+ DS + +I L + +A ++ +
Sbjct: 152 VTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDR 211
Query: 145 -VKFNCEDIGPEICNSLLAV--LASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
V C+ P++ + V L G ID AL + +M +E + + I C
Sbjct: 212 MVVKGCQ---PDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCN 268
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
+ L++ E+ +N I +V+ +I C R +A ++L ++ R+ P+
Sbjct: 269 YKNVNDALNLFTEM---DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 325
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ + + + F G + E E + + K + P Y I G + R+ EAK + E
Sbjct: 326 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 385
Query: 321 VIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+++S + N LI G + + F M ++G V T + L +
Sbjct: 386 LMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 445
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
+ D V+K + ++ D+ +Y++++ LC +G++ A V + ++R ++PD+ YN
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYN 505
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
++E C+ + L+ + G N+ TY ++S F G E A LF M E+
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEV 527
G PD+ TY +L+ ++ + A+ E+
Sbjct: 566 GPLPDSGTYNTLIRAHLRDGDKAASAEL 593
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 176/425 (41%), Gaps = 67/425 (15%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL+ +A D + + ++M + G+ + + + I FC ++L L++L ++ K
Sbjct: 87 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG 146
Query: 220 --------NSMING-----------SVIAVLI--------------IHGFCKGKRVEEAF 246
NS++NG S++ ++ IHG + R EA
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 247 KVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGL 306
++D + ++ C+PD + Y IV G + +LKK + + P Y I L
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 307 IVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLS 366
C K + +D LN F M KG P +
Sbjct: 267 ------CNYKNV------------NDALN----------------LFTEMDNKGIRPNVV 292
Query: 367 TLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEM 426
T ++L + LC + + + + ++ +++ ++ G+L EA + EM
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 427 KRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEI 486
++ +DPD+ Y+SL+ C D L AK +++ M + C N+ TYN LI F + +
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 487 EGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTF 546
+ + LF M ++G+ + TYT+L+ G Q A VF + V+ V+ S
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 547 MISLC 551
+ LC
Sbjct: 473 LDGLC 477
Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 169/375 (45%), Gaps = 9/375 (2%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N+L+ L A+ + D M +G + + +G+ + C+ + LS+L +K
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL---KK 246
Query: 218 RENSMIN-GSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGS 276
E I G VI II C K V +A + E+ + +P+ + Y + G
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 277 VFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVL-- 334
+ +L + + P + I + E ++ EA++L + ++ K +ID D+
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTY 364
Query: 335 NALIGSVSSIDP-RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSA 393
++LI D A F MI K P + T + L K CK + DE +E+++ +S
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 394 NDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRP 453
+ +Y ++ + A V ++M G+ PD+ Y+ L++ C +
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
Query: 454 AKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLE 513
A +++ + S ++ TYNI+I + G++E LF ++ KGV P+ TYT+++
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 544
Query: 514 GLCQETNLQAAFEVF 528
G C++ + A +F
Sbjct: 545 GFCRKGLKEEADALF 559
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 117/271 (43%), Gaps = 1/271 (0%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
VL K KLG P + G RI +A L +V + D N LI +
Sbjct: 138 VLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF 197
Query: 343 SIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ S A+ + M+ KG P L T + LCKR D + + K + +
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
YN ++ LC + +A + EM KG+ P+V YNSL+ C A +L M
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ N+ T++ LI F + G++ A +L+ M+++ + PD TY+SL+ G C L
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A +F ++ D +T + C+
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F M++ P++ S L + K NK D ++ + + + ++ +Y+++++
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C +L A V+ +M + G +PD+ NSL+ C + + A L QM G
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ T+N LI A+ L M+ KG PD TY ++ GLC+ ++ A +
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 529 NKSVNHDVMLARSILSTFMISLC 551
K + I +T + +LC
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALC 267
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 22/187 (11%)
Query: 370 NLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRK 429
NL ++ K +VE K+LSA M +++++S + ++M+
Sbjct: 67 NLFGDMVKSRPFPSIVEFSKLLSA---IAKMNKFDLVIS-------------LGEQMQNL 110
Query: 430 GLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGA 489
G+ ++ Y+ L+ CR L A + +M G ++ T N L++ F I A
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 490 LRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI- 548
+ L M+E G PD+ T+ +L+ GL + A + ++ V V + L T+ I
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMV---VKGCQPDLVTYGIV 227
Query: 549 --SLCRR 553
LC+R
Sbjct: 228 VNGLCKR 234
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 201/470 (42%), Gaps = 50/470 (10%)
Query: 66 LALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFI 125
LAL FF + F H+PL++ +++ L++ Q++++ +L+Q+K+ ++ +
Sbjct: 58 LALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISV 117
Query: 126 IPSLIQGKNTQKAFSVFNEVK-FNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRG 184
I Q ++A +F +K F C D +I N +L L + I ++ +M G
Sbjct: 118 ISVYRQVGLAERAVEMFYRIKEFGC-DPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 176
Query: 185 VEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEE 244
E + + V ++ CK +V+
Sbjct: 177 FEPNVFTYNV-------------------------------------LLKALCKNNKVDG 199
Query: 245 AFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG--VAPRTNDYREF 302
A K+L E+ + C PD ++Y V +G ++K+ R+L P + Y
Sbjct: 200 AKKLLVEMSNKGCCPDAVSYTTVISSMCEVG-------LVKEGRELAERFEPVVSVYNAL 252
Query: 303 ILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFMIEKGR 361
I GL E A EL +V + + + LI + +S A F M+++G
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312
Query: 362 VPTLSTLSNLSKNLCKRNKSDELVEVY-KVLSANDYFTDMESYNVMVSFLCTSGRLREAY 420
P + TLS+L K R + + ++++ +++ ++ +YN +V C+ G + +A
Sbjct: 313 HPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAV 372
Query: 421 GVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKF 480
V M+ G P++ Y SL+ + L A +W++M SGC N+ Y ++
Sbjct: 373 SVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEAL 432
Query: 481 SEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNK 530
+ + A L M ++ AP T+ + ++GLC L A +VF +
Sbjct: 433 CRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 173/397 (43%), Gaps = 36/397 (9%)
Query: 173 ALKMFDEMSHRGV-EFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKR-----ENSMINGS 226
AL F +++ + + + + F V I K + ++ V +L +++ + E+ I S
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFI--S 116
Query: 227 VIAVLIIHGFCKGKRVEEAFKVLDELRIRE--CKPDFIAYRIVAEEFKLMGSVFEREVVL 284
VI+V G +R E F RI+E C P Y V + + +V
Sbjct: 117 VISVYRQVGL--AERAVEMF-----YRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVY 169
Query: 285 KKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDV-LNALIGSVSS 343
+ ++ G P Y + L ++ AK+L V +S K D V +I S+
Sbjct: 170 RDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKL-LVEMSNKGCCPDAVSYTTVISSMCE 228
Query: 344 IDPRSAIVFFNFMIEKGRV------PTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
+ ++++GR P +S + L LCK + E+ + +
Sbjct: 229 VG----------LVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGIS 278
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
++ SY+ +++ LC SG++ A+ + +M ++G P++ +SL++ C A L
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDL 338
Query: 458 WDQMFAS-GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
W+QM G N+ YN L+ F G I A+ +F +M E G +P+ TY SL+ G
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
+ +L A ++NK + + + + +LCR
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRH 435
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 158/378 (41%), Gaps = 17/378 (4%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQG----KNTQKAFS 140
+SY +++ L S QI S L Q+ K ++Y + SL++G T A
Sbjct: 282 ISYSTLINVLCNSGQIELAFSFLTQML--KRGCHPNIY--TLSSLVKGCFLRGTTFDALD 337
Query: 141 VFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWK 198
++N++ + P + N+L+ S G I A+ +F M G + +G I
Sbjct: 338 LWNQM-IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING 396
Query: 199 FCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECK 258
F + L + + +++ + V+ ++ C+ + +EA +++ + C
Sbjct: 397 FAKRGSLDGAVYIWNKMLT--SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCA 454
Query: 259 PDFIAYRIVAEEFKLMGSVFEREVVLKK-KRKLGVAPRTNDYREFILGLIVERRICEAKE 317
P + + G + E V ++ +++ P Y E + GL RI EA
Sbjct: 455 PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYG 514
Query: 318 LGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLC 376
L I N L+ GS ++ P A+ M+ G+ P T++ + C
Sbjct: 515 LTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYC 574
Query: 377 KRNKSDELVEVYKVLSAN--DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPD 434
K+ K++ ++ ++S + D+ SY ++ LC S + +++ M G+ P
Sbjct: 575 KQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPS 634
Query: 435 VSFYNSLMEACCREDLLR 452
++ ++ L+ +D++R
Sbjct: 635 IATWSVLINCFILDDIVR 652
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/480 (18%), Positives = 174/480 (36%), Gaps = 82/480 (17%)
Query: 76 QQPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNT 135
++ F + +Y+ +LK+L + +++ +L ++ D+ Y +I S+ +
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCE---- 228
Query: 136 QKAFSVFNEVKFNCEDIGP--EICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFG 193
+ E + E P + N+L+ L + A ++ EM +G+ + I +
Sbjct: 229 ---VGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYS 285
Query: 194 VFIWKFCENAKLGQVLSMLDEVRKRE----------------------------NSMING 225
I C + ++ S L ++ KR N MI G
Sbjct: 286 TLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345
Query: 226 -----SVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
+V+A ++ GFC + +A V + C P+ Y + F GS+
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDG 405
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI- 338
+ K G P Y + L + EA+ L E++ NA I
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 339 GSVSSIDPRSAIVFFNFMIEKGRVP-TLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
G + A F M ++ R P + T + L L K N+ +E + + +
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCRE--------- 448
+YN ++ C +G A ++ +M G PD N ++ A C++
Sbjct: 526 WSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM 585
Query: 449 -DLLRPAKKLW---------------------------DQMFASGCSGNLKTYNILISKF 480
DL+ ++ W ++M ++G ++ T+++LI+ F
Sbjct: 586 LDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 180/397 (45%), Gaps = 7/397 (1%)
Query: 158 NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRK 217
N LL+ +A + + + ++M G+ + +FI FC ++L L++L ++ K
Sbjct: 87 NKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK 146
Query: 218 --RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
E ++ S + ++G+C KR+ +A ++D++ KPD + + L
Sbjct: 147 LGYEPDIVTLSSL----LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLN 335
E ++ + + G P Y + GL I A L + + + + + N
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262
Query: 336 ALIGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSAN 394
+I S+ A+ F M KG P + T ++L LC + + + +
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK 322
Query: 395 DYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPA 454
++ ++N ++ G+L EA + +EM ++ +DPD YN L+ C + L A
Sbjct: 323 KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA 382
Query: 455 KKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEG 514
K+++ M + C N++TYN LI+ F + +E + LF M ++G+ + TYT++++G
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 515 LCQETNLQAAFEVFNKSVNHDVMLARSILSTFMISLC 551
Q + +A VF + V++ V S + LC
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 196/452 (43%), Gaps = 50/452 (11%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
QP+ ++Y +++ L I+ ++L +++ +I + ++ II SL + ++ +
Sbjct: 220 QPDL----VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 137 KAFSVFNEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGV 194
A +F E++ + I P + NSL+ L + G +A ++ M + + + + F
Sbjct: 276 VAVDLFTEME--TKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 195 FIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRI 254
I F + KL + + +E+ +R S+ ++ L+I+GFC R++EA ++ +
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQR--SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS 391
Query: 255 RECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICE 314
++C P+ Y + F V + + ++ + G+ T Y I G
Sbjct: 392 KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF------- 444
Query: 315 AKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPT-LSTLSNLSK 373
+ D SA + F M+ RVPT + T S L
Sbjct: 445 ---------------------------QAGDCDSAQMVFKQMVSN-RVPTDIMTYSILLH 476
Query: 374 NLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDP 433
LC K D + ++K L ++ ++ YN M+ +C +G++ EA+ + + K P
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---P 533
Query: 434 DVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLF 493
DV YN+++ C + LL+ A L+ +M G N TYN LI + + L
Sbjct: 534 DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELI 593
Query: 494 HNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
M G DA+T SL+ + + L +F
Sbjct: 594 KEMRSSGFVGDAST-ISLVTNMLHDGRLDKSF 624
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 203/448 (45%), Gaps = 14/448 (3%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
++ S+L S++I+ +++ Q+ D+ + +I L +A ++ ++
Sbjct: 154 VTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQ 213
Query: 145 -VKFNCEDIGPEICN--SLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCE 201
V+ C+ P++ +++ L G ID AL + ++M ++ + + F I C
Sbjct: 214 MVQRGCQ---PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC- 269
Query: 202 NAKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPD 260
K V +D + E I +V+ +I+ C R +A ++L + ++ P+
Sbjct: 270 --KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN 327
Query: 261 FIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGE 320
+ + + + F G + E E + ++ + + P T Y I G + R+ EAK++ +
Sbjct: 328 VVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387
Query: 321 VIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRN 379
+VS + N LI G + F M ++G V T + + + +
Sbjct: 388 FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447
Query: 380 KSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYN 439
D V+K + +N TD+ +Y++++ LC+ G+L A + + +++ ++ ++ YN
Sbjct: 448 DCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYN 507
Query: 440 SLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK 499
+++E C+ + A WD + ++ TYN +IS ++ A LF M E
Sbjct: 508 TMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKED 564
Query: 500 GVAPDATTYTSLLEGLCQETNLQAAFEV 527
G P++ TY +L+ ++ + A+ E+
Sbjct: 565 GTLPNSGTYNTLIRANLRDCDRAASAEL 592
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 174/386 (45%), Gaps = 43/386 (11%)
Query: 173 ALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV-L 231
A+ + D+M RG + + +G + C+ + L++L+ K E + I +V+
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLN---KMEAARIKANVVIFNT 263
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
II CK + VE A + E+ + +P+ + Y + G + +L +
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 292 VAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRSAIV 351
+ P + I E ++ EA++L E ++ SIDP + +
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ-----------------RSIDPDT--I 364
Query: 352 FFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLC 411
+N +I C N+ DE +++K + + D ++++YN +++ C
Sbjct: 365 TYNLLI---------------NGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Query: 412 TSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLK 471
R+ + + +EM ++GL + Y ++++ + A+ ++ QM ++ ++
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469
Query: 472 TYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF-NK 530
TY+IL+ G+++ AL +F + + + + Y +++EG+C+ + A+++F +
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529
Query: 531 SVNHDVMLARSILSTFMISLCRRVLI 556
S+ DV+ +++S LC + L+
Sbjct: 530 SIKPDVVTYNTMIS----GLCSKRLL 551
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 1/271 (0%)
Query: 283 VLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVS 342
VL K KLG P + G +RI +A L + +V + D LI +
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 343 SIDPRS-AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
+ S A+ + M+++G P L T + LCKR D + + + A ++
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVV 259
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
+N ++ LC + A + EM+ KG+ P+V YNSL+ C A +L M
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
+ N+ T+N LI F + G++ A +L M+++ + PD TY L+ G C L
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 522 QAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
A ++F V+ D + +T + C+
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%)
Query: 349 AIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVS 408
A+ F M++ P++ + L + K NK + ++ + + + D+ +Y++ ++
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 409 FLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSG 468
C +L A V+ +M + G +PD+ +SL+ C + A L DQM G
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 469 NLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVF 528
+ T+ LI + A+ L M+++G PD TY +++ GLC+ ++ A +
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 529 NKSVNHDVMLARSILSTFMISLCR 552
NK + I +T + SLC+
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCK 270
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 84/215 (39%), Gaps = 21/215 (9%)
Query: 360 GRVPTLSTLSNLSKNLCKRNK------------SDELVEVYKVLSANDYFTDME------ 401
G PT+ + NL + C + L ++ KV A D F DM
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFP 81
Query: 402 ---SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
+N ++S + + + ++M+ G+ D+ Y+ + CR L A +
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQE 518
+M G ++ T + L++ + I A+ L M+E G PD T+T+L+ GL
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 519 TNLQAAFEVFNKSVNHDVMLARSILSTFMISLCRR 553
A + ++ V T + LC+R
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/498 (22%), Positives = 214/498 (42%), Gaps = 62/498 (12%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFF--NWASQ-------------QPNFTHSPLSYHSI 90
+L +V P +T +L G F N AS+ QP+ ++Y ++
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL----VTYGAV 211
Query: 91 LKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCE 150
+ L + + ++L +++ KI D +Y +I SL + ++ A ++F E+ + +
Sbjct: 212 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM--DNK 269
Query: 151 DIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQV 208
I P++ +SL++ L + G +A ++ +M R + + + F I F + KL +
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 209 LSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
+ DE+ +R I+ +++ +I+GFC R++EA ++ + ++C PD + Y +
Sbjct: 330 EKLFDEMIQRS---IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKF 327
F V + + + + G+ T Y I G
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF-------------------- 426
Query: 328 TIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEV 387
+ D +A + F M+ G P + T + L LCK K ++ + V
Sbjct: 427 --------------QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Query: 388 YKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCR 447
++ L + D+ +YN+M +C +G++ + + + + KG+ PDV YN+++ C+
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532
Query: 448 EDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATT 507
+ L A L+ +M G + TYN LI G+ + L M A DA+T
Sbjct: 533 KGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAST 592
Query: 508 YTSLLEGLCQETNLQAAF 525
Y L+ + + L F
Sbjct: 593 Y-GLVTDMLHDGRLDKGF 609
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 176/396 (44%), Gaps = 7/396 (1%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL+ +A D + ++M GV + + + I C ++L L++L ++ K
Sbjct: 71 LLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMK-- 128
Query: 220 NSMINGSVIAVL--IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSV 277
+ G I L +++GFC G R+ EA ++D++ +PD + + +
Sbjct: 129 --LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 186
Query: 278 FEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNAL 337
E ++++ G P Y I GL A L + GK D + + +
Sbjct: 187 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTV 246
Query: 338 IGSVSSI-DPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDY 396
I S+ A+ F M KG P + T S+L LC + + + +
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 397 FTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKK 456
++ ++N ++ G+L EA + EM ++ +DP++ YNSL+ C D L A++
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 457 LWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLC 516
++ M + C ++ TYN LI+ F + ++ + LF +M +G+ + TYT+L+ G
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426
Query: 517 QETNLQAAFEVFNKSVNHDVMLARSILSTFMISLCR 552
Q ++ A VF + V+ V +T + LC+
Sbjct: 427 QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/484 (20%), Positives = 219/484 (45%), Gaps = 23/484 (4%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S + + +L +++ ++ + + S +++++ ++ + Y +I L + +Q +F++
Sbjct: 64 SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLC--RRSQLSFALA 121
Query: 143 NEVKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFC 200
K GP I NSLL I A+ + D+M G + T+ F +
Sbjct: 122 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 181
Query: 201 ENAKLGQVLSMLDEVRKRENSMINGS----VIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
++ K + ++++ E ++ G V +I+G CK + A +L+++ +
Sbjct: 182 QHNKASEAVALV------ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 235
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
+ D + Y V + V + + + G+ P Y I L R +A
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295
Query: 317 ELGEVIVSGKFTIDDDVLNALIGSVSSIDPR-SAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
L ++ K + N+LI + + A F+ MI++ P + T ++L
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C ++ DE +++ ++ + D D+ +YN +++ C + ++ + + ++M R+GL +
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y +L+ + A+ ++ QM + G N+ TYN L+ + G++E A+ +F
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 475
Query: 496 MLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFN----KSVNHDVMLARSILSTFMISLC 551
+ + + PD TY + EG+C+ ++ +++F K V DV+ +++S F C
Sbjct: 476 LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF----C 531
Query: 552 RRVL 555
++ L
Sbjct: 532 KKGL 535
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 199/455 (43%), Gaps = 15/455 (3%)
Query: 80 FTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAF 139
+ S ++ +S+L +I+ +++ Q+ D+ + ++ L Q +A
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190
Query: 140 SVFNE-VKFNCEDIGPEIC--NSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
++ V C+ P++ +++ L G D AL + ++M +E + + I
Sbjct: 191 ALVERMVVKGCQ---PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 197 WKFCENAKLGQVLSMLDEVRK---RENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELR 253
C+ + L++ E+ R + S+I+ L C R +A ++L ++
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL-----CNYGRWSDASRLLSDML 302
Query: 254 IRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRIC 313
R+ P+ + + + + F G + E E + + + + P Y I G + R+
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 314 EAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLS 372
EA+++ ++VS D N LI G + + F M +G V T + L
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 373 KNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLD 432
+ + D V+K + ++ ++ +YN ++ LC +G+L +A V + +++ ++
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 433 PDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRL 492
PD+ YN + E C+ + L+ + G ++ YN +IS F + G E A L
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 493 FHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEV 527
F M E G PD+ TY +L+ ++ + A+ E+
Sbjct: 543 FIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 577
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 157/377 (41%), Gaps = 11/377 (2%)
Query: 183 RGVEFSTIGFGVFIWKFCENA----KLGQVLSMLDEVRKREN--SMINGSVIAVLIIHGF 236
RG+ FS + + + K NA KL + + + E+ K S++ S + +
Sbjct: 20 RGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKL----LSAI 75
Query: 237 CKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRT 296
K K+ + +++ I + Y I+ + +L K KLG P
Sbjct: 76 AKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSI 135
Query: 297 NDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSVSSIDPRS-AIVFFNF 355
+ G RI EA L + +V + D L+ + + S A+
Sbjct: 136 VTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER 195
Query: 356 MIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGR 415
M+ KG P L T + LCKR + D + + + D+ Y+ ++ LC
Sbjct: 196 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH 255
Query: 416 LREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNI 475
+ +A + EM KG+ PDV Y+SL+ C A +L M + N+ T+N
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNS 315
Query: 476 LISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHD 535
LI F++ G++ A +LF M+++ + P+ TY SL+ G C L A ++F V+ D
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 536 VMLARSILSTFMISLCR 552
+ +T + C+
Sbjct: 376 CLPDVVTYNTLINGFCK 392
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 166/373 (44%), Gaps = 6/373 (1%)
Query: 160 LLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRE 219
LL V+A D + + D + GV + + FC++++ S L ++ K
Sbjct: 78 LLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKL- 136
Query: 220 NSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFE 279
V +I+GFC G R+EEA +++++ KPD + Y + + G V
Sbjct: 137 -GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNY 195
Query: 280 REVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIG 339
+ + G+ P Y + GL R +A L + K D NALI
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 340 S-VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFT 398
+ V A +N MI P + T ++L C DE +++ ++ F
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 399 DMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLW 458
D+ +Y +++ C ++ +A + EM +KGL + Y +L++ + A++++
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375
Query: 459 DQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEK---GVAPDATTYTSLLEGL 515
M + G N++TYN+L+ G+++ AL +F +M ++ GVAP+ TY LL GL
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGL 435
Query: 516 CQETNLQAAFEVF 528
C L+ A VF
Sbjct: 436 CYNGKLEKALMVF 448
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 174/366 (47%), Gaps = 8/366 (2%)
Query: 170 IDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIA 229
++ A+ M ++M G++ + + I C+N + LS+ D++ EN I V+
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM---ENYGIRPDVVM 214
Query: 230 VL-IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKR 288
+++G C R +A +L + R+ KPD I + + + F G + E + +
Sbjct: 215 YTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274
Query: 289 KLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALI-GSVSSIDPR 347
++ +AP Y I G +E + EA+++ ++ + D +LI G
Sbjct: 275 RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVD 334
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMV 407
A+ F M +KG T + L + + K + EV+ + + ++ +YNV++
Sbjct: 335 DAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Query: 408 SFLCTSGRLREAYGVIQEMKRKGLD---PDVSFYNSLMEACCREDLLRPAKKLWDQMFAS 464
LC +G++++A + ++M+++ +D P++ YN L+ C L A +++ M
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Query: 465 GCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAA 524
+ TY I+I + G+++ A+ LF ++ KGV P+ TYT+++ GL +E A
Sbjct: 455 EMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEA 514
Query: 525 FEVFNK 530
+F K
Sbjct: 515 HVLFRK 520
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 131/300 (43%), Gaps = 1/300 (0%)
Query: 238 KGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTN 297
K K+ + + D L+I D ++ F + L K KLG P
Sbjct: 84 KMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIV 143
Query: 298 DYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV-SSIDPRSAIVFFNFM 356
+ I G + R+ EA + +V D + +I S+ + A+ F+ M
Sbjct: 144 TFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM 203
Query: 357 IEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRL 416
G P + ++L LC + + + + ++ D+ ++N ++ G+
Sbjct: 204 ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKF 263
Query: 417 REAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNIL 476
+A + EM R + P++ Y SL+ C E + A++++ M GC ++ Y L
Sbjct: 264 LDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSL 323
Query: 477 ISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDV 536
I+ F + +++ A+++F+ M +KG+ + TYT+L++G Q A EVF+ V+ V
Sbjct: 324 INGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGV 383
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 6/217 (2%)
Query: 342 SSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDME 401
S P A F M++ G P + T ++L C N+ +E + + + D+
Sbjct: 119 QSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVV 178
Query: 402 SYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQM 461
Y ++ LC +G + A + +M+ G+ PDV Y SL+ C R A L M
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 462 FASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNL 521
++ T+N LI F + G+ A L++ M+ +AP+ TYTSL+ G C E +
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298
Query: 522 QAAFEVF----NKSVNHDVMLARSILSTFMISLCRRV 554
A ++F K DV+ S+++ F C++V
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGF--CKCKKV 333
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 95/212 (44%), Gaps = 4/212 (1%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ S+ A+ F M+E +P++ + L + K K D ++ + L D
Sbjct: 47 GLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHD 106
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ + N++++ C S + A + +M + G +PD+ + SL+ C + + A + +
Sbjct: 107 LYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVN 166
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
QM G ++ Y +I + G + AL LF M G+ PD YTSL+ GLC
Sbjct: 167 QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Query: 520 NLQAAFEVF----NKSVNHDVMLARSILSTFM 547
+ A + + + DV+ +++ F+
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 58/138 (42%)
Query: 415 RLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYN 474
+ EA + M P + + L+ + L D + G S +L T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 475 ILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNH 534
+L++ F + + A M++ G PD T+TSL+ G C ++ A + N+ V
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 535 DVMLARSILSTFMISLCR 552
+ + +T + SLC+
Sbjct: 172 GIKPDVVMYTTIIDSLCK 189
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 197/427 (46%), Gaps = 15/427 (3%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSL-IQGKNTQKAFSVFNEVKFNCEDIGPEIC--NSLL 161
SVL +V D++ + +I L ++GK ++ V V+ C+ P++ NS++
Sbjct: 144 SVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ---PDVVTYNSIV 200
Query: 162 AVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENS 221
+ G AL + +M R V+ + I C + + +S+ E+ E
Sbjct: 201 NGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM---ETK 257
Query: 222 MINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
I SV+ ++ G CK + + +L ++ RE P+ I + ++ + F G + E
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+ K+ G++P Y + G ++ R+ EA + +++V K + D +LI
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 341 ---VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYF 397
V +D + F + ++G V T S L + C+ K E+++ + ++
Sbjct: 378 YCMVKRVD--DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 398 TDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKL 457
D+ +Y +++ LC +G+L +A + +++++ +D + Y +++E C+ + A L
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 458 WDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQ 517
+ + G N+ TY ++IS + G + A L M E G AP+ TY +L+ +
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 518 ETNLQAA 524
+ +L A+
Sbjct: 556 DGDLTAS 562
Score = 122 bits (305), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 183/371 (49%), Gaps = 9/371 (2%)
Query: 171 DNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMINGSVIAV 230
D+A+ +F EM S + F F F A+ Q +LD ++ E + I ++ +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRF---FSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126
Query: 231 -LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRK 289
++I+ FC+ + A+ VL ++ +PD + + + L G V E V++ + +
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 290 LGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGSV---SSIDP 346
G P Y + G+ A +L + D + +I S+ ID
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID- 245
Query: 347 RSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMESYNVM 406
+AI F M KG ++ T ++L + LCK K ++ + K + + + ++ ++NV+
Sbjct: 246 -AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 407 VSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASGC 466
+ G+L+EA + +EM +G+ P++ YN+LM+ C ++ L A + D M + C
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 467 SGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAFE 526
S ++ T+ LI + V ++ +++F N+ ++G+ +A TY+ L++G CQ ++ A E
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 527 VFNKSVNHDVM 537
+F + V+H V+
Sbjct: 425 LFQEMVSHGVL 435
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/440 (19%), Positives = 195/440 (44%), Gaps = 7/440 (1%)
Query: 77 QPNFTHSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQ 136
+P+ T ++++++K L L +++ ++ ++ N D Y I+ + + +T
Sbjct: 155 EPDTT----TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 137 KAFSVFNEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFI 196
A + +++ ++++ L DG ID A+ +F EM +G++ S + + +
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 197 WKFCENAKLGQVLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRE 256
C+ K +L ++ RE ++ + +++ F K +++EA ++ E+ R
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSRE--IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 257 CKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAK 316
P+ I Y + + + + + E +L + +P + I G + +R+ +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 317 ELGEVIVSGKFTIDDDVLNALI-GSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNL 375
++ I + + L+ G S + A F M+ G +P + T L L
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 376 CKRNKSDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDV 435
C K ++ +E+++ L + + Y ++ +C G++ +A+ + + KG+ P+V
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 436 SFYNSLMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHN 495
Y ++ C++ L A L +M G + N TYN LI G++ + +L
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Query: 496 MLEKGVAPDATTYTSLLEGL 515
M G + DA++ +++ L
Sbjct: 569 MKSCGFSADASSIKMVIDML 588
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/477 (19%), Positives = 196/477 (41%), Gaps = 48/477 (10%)
Query: 83 SPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVF 142
S + + +++ ++Q N + KQ+++N I + +I + T A+SV
Sbjct: 87 SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146
Query: 143 NEVKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCEN 202
+V + N+L+ L +G + A+ + D M G + + + + C +
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 206
Query: 203 AKLGQVLSMLDEVRKRENSMINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDF 261
G LD +RK E + V II C+ ++ A + E+ + K
Sbjct: 207 ---GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263
Query: 262 IAYRIVAEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEV 321
+ Y + G + ++LK + P + + + E ++ EA EL
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL--- 320
Query: 322 IVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKS 381
+ MI +G P + T + L C +N+
Sbjct: 321 -------------------------------YKEMITRGISPNIITYNTLMDGYCMQNRL 349
Query: 382 DELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSL 441
E + ++ N D+ ++ ++ C R+ + V + + ++GL + Y+ L
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 442 MEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGV 501
++ C+ ++ A++L+ +M + G ++ TY IL+ + G++E AL +F ++ + +
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 502 APDATTYTSLLEGLCQETNLQAAFEVF----NKSVNHDVMLARSILSTFMIS-LCRR 553
YT+++EG+C+ ++ A+ +F K V +VM T MIS LC++
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY-----TVMISGLCKK 521
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 95/191 (49%)
Query: 340 SVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ I AI F MI +P+L S + + + + +++ K L N +
Sbjct: 63 GIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHN 122
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ + N+M++ C + AY V+ ++ + G +PD + +N+L++ E + A L D
Sbjct: 123 IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVD 182
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
+M +GC ++ TYN +++ G+ AL L M E+ V D TY+++++ LC++
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 520 NLQAAFEVFNK 530
+ AA +F +
Sbjct: 243 CIDAAISLFKE 253
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 131/295 (44%), Gaps = 13/295 (4%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWAS-QQPNFTH--------SP--LSYHSILKSLS 95
L +V+R I P ++T + L F Q+ N + SP ++Y++++
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 96 LSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPE 155
+ +++ +++L + NK + D + +I K VF +
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 156 ICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEV 215
+ L+ G I A ++F EM GV + +G+ + C+N KL + L + +++
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 216 RKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMG 275
+K + + G V+ II G CKG +VE+A+ + L + KP+ + Y ++ G
Sbjct: 465 QKSKMDL--GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Query: 276 SVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTID 330
S+ E ++L+K + G AP Y I + + + + +L E + S F+ D
Sbjct: 523 SLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
>sp|Q9C9A2|PP112_ARATH Pentatricopeptide repeat-containing protein At1g71060,
mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2
SV=1
Length = 510
Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 188/426 (44%), Gaps = 55/426 (12%)
Query: 47 LSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDSV 106
LSP+L+ V+ L LAL F WA Q F H+ +Y+++++SL +Q I S+
Sbjct: 92 LSPALIEEVLKK-LSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSL 150
Query: 107 LKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVLAS 166
+ +K K+ L + I + + ++A F++++ + N +L L+
Sbjct: 151 VDDMKAKKL-LSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSK 209
Query: 167 DGYIDNALKMFDEMSHRGVEFSTIGFGVFI--WKFCENAKLGQVLSML--DEV-RKRENS 221
+ +A K+FD+M + E + + + W GQ L++L DEV R+ ++
Sbjct: 210 SRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGW--------GQELNLLRVDEVNREMKDE 261
Query: 222 MINGSVIAV-LIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
V+A +II+ CK K+ EEA + +E+ R CKP
Sbjct: 262 GFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKP--------------------- 300
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+P + I GL E+++ +A E E S F ++ NAL+G+
Sbjct: 301 ------------SPHI--FCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGA 346
Query: 341 VS-SIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
S A + M KG P T + +L + +S E EVY+ +S
Sbjct: 347 YCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE---PT 403
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+ +Y +MV C RL A + EMK KG+ P + ++SL+ A C E+ L A + ++
Sbjct: 404 VSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFN 463
Query: 460 QMFASG 465
+M G
Sbjct: 464 EMLDVG 469
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 188/434 (43%), Gaps = 23/434 (5%)
Query: 105 SVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNEVKFNCEDIGPEICNSLLAVL 164
SV QV N + D+ I ++ K ++ NE + P + +L L
Sbjct: 52 SVETQVSANDASQDAER----ICKILTKFTDSKVETLLNEASVK---LSPALIEEVLKKL 104
Query: 165 ASDGYIDNALKMFD-EMSHRGVEFSTIGFGVFIWKFCENAKLGQVLSMLDEVRKRENSMI 223
++ G + AL +F + +G + +T + I + + + S++D+++ ++ ++
Sbjct: 105 SNAGVL--ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKK--LL 160
Query: 224 NGSVIAVLIIHGFCKGKRVEEA---FKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFER 280
+ A LI + + ++V+EA F ++E + DF + + +V +
Sbjct: 161 SKETFA-LISRRYARARKVKEAIGAFHKMEEFGFKMESSDF---NRMLDTLSKSRNVGDA 216
Query: 281 EVVLKKKRKLGVAPRTNDYREFILGLIVERRICEAKELGEVIVSGKFTIDDDVLNALIGS 340
+ V K +K P Y + G E + E+ + F D +I +
Sbjct: 217 QKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINA 276
Query: 341 -VSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTD 399
+ AI FFN M ++ P+ +L L K ++ +E ++ ++ + +
Sbjct: 277 HCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLE 336
Query: 400 MESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWD 459
+YN +V C S R+ +AY + EM+ KG+ P+ Y+ ++ R + A +++
Sbjct: 337 APTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQ 396
Query: 460 QMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQET 519
M C + TY I++ F ++ A++++ M KGV P ++SL+ LC E
Sbjct: 397 TM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHEN 453
Query: 520 NLQAAFEVFNKSVN 533
L A E FN+ ++
Sbjct: 454 KLDEACEYFNEMLD 467
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 122 bits (305), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 121/533 (22%), Positives = 221/533 (41%), Gaps = 38/533 (7%)
Query: 46 SLSPSLVARVINPYLLTHHSLALGFFNWASQQPNFTHSPLSYHSILKSLSLSRQINAIDS 105
+L+P V RV+ L LA FF W+ + F HS SY + L +R +S
Sbjct: 105 TLAPIWVPRVLVE-LKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANS 163
Query: 106 VLKQVKVNKITLDS---------------SVYRFIIPSLIQGKNTQKAFSVFNEVK-FNC 149
VLK++ ++K D V+ + LI ++A F+++K F
Sbjct: 164 VLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFR- 222
Query: 150 EDIGPEI--CNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAKLGQ 207
+ P+ CN LL A G D+ + F +M G + + + I C+ +
Sbjct: 223 --VFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEA 280
Query: 208 VLSMLDEVRKRENSMINGSVIAVLIIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIV 267
+ +E++ R ++ +V +I GF K R+++ +E++ C+PD I Y +
Sbjct: 281 ARGLFEEMKFR--GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL 338
Query: 268 AEEFKLMGSVFEREVVLKKKRKLGVAPRTNDYREFILGLIVERRICEA-------KELGE 320
F G + ++ + G+ P Y + E + +A + +G
Sbjct: 339 INCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 321 VIVSGKFTIDDDVLNALIGSVSSIDPRSAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNK 380
V +T D N IG++S A N M++ G + T + L LC +
Sbjct: 399 VPNEYTYTSLIDA-NCKIGNLSD-----AFRLGNEMLQVGVEWNVVTYTALIDGLCDAER 452
Query: 381 SDELVEVYKVLSANDYFTDMESYNVMVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNS 440
E E++ + ++ SYN ++ + + A ++ E+K +G+ PD+ Y +
Sbjct: 453 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 512
Query: 441 LMEACCREDLLRPAKKLWDQMFASGCSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKG 500
+ C + + AK + ++M G N Y L+ + + G L L M E
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
Query: 501 VAPDATTYTSLLEGLCQETNLQAAFEVFNKSVNHDVMLARSILSTFMI-SLCR 552
+ T+ L++GLC+ + A + FN+ N + A + + T MI LC+
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 625
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/492 (19%), Positives = 195/492 (39%), Gaps = 43/492 (8%)
Query: 85 LSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFIIPSLIQGKNTQKAFSVFNE 144
+Y+ ++ + + A + +++K + D+ Y +I + F E
Sbjct: 263 FTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEE 322
Query: 145 VKFNCEDIGPEICNSLLAVLASDGYIDNALKMFDEMSHRGVEFSTIGFGVFIWKFCENAK 204
+K C + N+L+ G + L+ + EM G++ + + + + FC+
Sbjct: 323 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 205 LGQVLSMLDEVRK--------RENSMINGS-------------------------VIAVL 231
+ Q + ++R+ S+I+ + V
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 232 IIHGFCKGKRVEEAFKVLDELRIRECKPDFIAYRIVAEEFKLMGSVFEREVVLKKKRKLG 291
+I G C +R++EA ++ ++ P+ +Y + F ++ +L + + G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 292 VAPRTNDYREFILGLIVERRICEAK----ELGEVIVSGKFTIDDDVLNALIGSVSSIDPR 347
+ P Y FI GL +I AK E+ E + I +++A S +P
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF---KSGNPT 559
Query: 348 SAIVFFNFMIEKGRVPTLSTLSNLSKNLCKRNKSDELVEVYKVLSANDYFTDMES--YNV 405
+ + M E T+ T L LCK + V+ + +S ND+ + +
Sbjct: 560 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS-NDFGLQANAAIFTA 618
Query: 406 MVSFLCTSGRLREAYGVIQEMKRKGLDPDVSFYNSLMEACCREDLLRPAKKLWDQMFASG 465
M+ LC ++ A + ++M +KGL PD + Y SLM+ ++ + A L D+M G
Sbjct: 619 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 678
Query: 466 CSGNLKTYNILISKFSEVGEIEGALRLFHNMLEKGVAPDATTYTSLLEGLCQETNLQAAF 525
+L Y L+ S +++ A M+ +G+ PD S+L+ + + A
Sbjct: 679 MKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAV 738
Query: 526 EVFNKSVNHDVM 537
E+ + + H ++
Sbjct: 739 ELQSYLMKHQLL 750
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 188,911,509
Number of Sequences: 539616
Number of extensions: 7641482
Number of successful extensions: 26334
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 19060
Number of HSP's gapped (non-prelim): 3147
length of query: 556
length of database: 191,569,459
effective HSP length: 123
effective length of query: 433
effective length of database: 125,196,691
effective search space: 54210167203
effective search space used: 54210167203
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)