Your job contains 1 sequence.
>008728
MSSGSLSHPPHLRTLFKQQPPSSNDNDGGDVDEELIMKALDIRRQVTAEIFKEAMWRKGK
FGITYSTNVADRLPDFIDHVMIKAAALKKLPEFADSSFNVRAKWFIEDSNVVPLIRWLKH
NGLSYPKIAKLICMSGGNLESIRHLAEWLKSVHVKGEFLGVALLKTGGNILERSIEELNE
IVEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVHFYLDMGMNKNDFGTMVFDYPKI
LGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYYLGVSRD
GMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYKKIRPV
VIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKYFLSLGIKLHQLGAMIADFPM
LLRYNIDIFRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRHKIMVENRVNFKLRY
MLACSNEEFNQKVADKVEGRRLYELGLINEAPHSQTVDDSLRQQDAVDYTDIGSKASEPQ
AIDSSIERTEFDRSSN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008728
(556 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2049329 - symbol:EMB2219 "embryo defective 221... 1903 1.6e-196 1
TAIR|locus:2139394 - symbol:BSM "AT4G02990" species:3702 ... 436 4.6e-41 1
TAIR|locus:2051814 - symbol:AT2G44020 "AT2G44020" species... 402 1.9e-37 1
TAIR|locus:2207420 - symbol:AT1G78930 "AT1G78930" species... 360 1.1e-30 1
TAIR|locus:505006461 - symbol:MDA1 "AT4G14605" species:37... 318 3.4e-26 1
TAIR|locus:2039240 - symbol:EMB3114 "AT2G36000" species:3... 257 2.7e-21 1
TAIR|locus:2062328 - symbol:AT2G34620 "AT2G34620" species... 246 4.2e-20 1
TAIR|locus:2056745 - symbol:EMB93 "EMBRYO DEFECTIVE 93" s... 228 3.8e-18 1
TAIR|locus:2162092 - symbol:AT5G55580 "AT5G55580" species... 244 1.1e-17 1
TAIR|locus:2153433 - symbol:PTAC15 "AT5G54180" species:37... 230 4.3e-16 1
TAIR|locus:2087926 - symbol:AT3G18870 "AT3G18870" species... 202 2.5e-15 1
TAIR|locus:2102827 - symbol:AT3G46950 "AT3G46950" species... 189 1.2e-11 1
TAIR|locus:1006230704 - symbol:AT1G62085 "AT1G62085" spec... 187 2.1e-11 1
TAIR|locus:2036843 - symbol:AT1G61960 "AT1G61960" species... 183 5.7e-11 1
TAIR|locus:2207265 - symbol:AT1G79220 species:3702 "Arabi... 176 2.5e-10 1
TAIR|locus:2018042 - symbol:AT1G62110 "AT1G62110" species... 161 1.6e-08 1
TAIR|locus:2199612 - symbol:AT1G21150 "AT1G21150" species... 154 6.7e-08 1
TAIR|locus:2037338 - symbol:AT1G74120 "AT1G74120" species... 153 1.1e-07 1
TAIR|locus:2036858 - symbol:AT1G61970 "AT1G61970" species... 152 1.3e-07 1
TAIR|locus:2177734 - symbol:AT5G64950 "AT5G64950" species... 147 4.0e-07 1
TAIR|locus:2172798 - symbol:AT5G23930 "AT5G23930" species... 144 1.1e-06 1
TAIR|locus:2036878 - symbol:AT1G61990 "AT1G61990" species... 125 1.4e-06 2
UNIPROTKB|Q49AM1 - symbol:MTERFD3 "mTERF domain-containin... 138 3.8e-06 1
UNIPROTKB|F1SPQ4 - symbol:MTERFD3 "Uncharacterized protei... 134 1.1e-05 1
GENEDB_PFALCIPARUM|PF07_0113 - symbol:PF07_0113 "hypothet... 134 2.7e-05 1
UNIPROTKB|Q8IBI2 - symbol:PF07_0113 "Putative uncharacter... 134 2.7e-05 1
TAIR|locus:2133920 - symbol:AT4G19650 "AT4G19650" species... 97 3.4e-05 2
TAIR|locus:2018057 - symbol:AT1G62120 "AT1G62120" species... 130 3.7e-05 1
UNIPROTKB|F1MI83 - symbol:MTERFD3 "Uncharacterized protei... 125 0.00010 1
UNIPROTKB|Q5R6G1 - symbol:MTERFD3 "mTERF domain-containin... 125 0.00010 1
TAIR|locus:2036868 - symbol:AT1G61980 "AT1G61980" species... 125 0.00012 1
UNIPROTKB|G3V130 - symbol:MTERFD1 "mTERF domain-containin... 120 0.00022 1
UNIPROTKB|E2RMX2 - symbol:MTERFD3 "Uncharacterized protei... 121 0.00029 1
TAIR|locus:2018062 - symbol:AT1G62150 "AT1G62150" species... 128 0.00033 2
UNIPROTKB|Q96E29 - symbol:MTERFD1 "mTERF domain-containin... 120 0.00042 1
TAIR|locus:2103291 - symbol:SHOT1 "AT3G60400" species:370... 86 0.00048 2
UNIPROTKB|F1RY61 - symbol:MTERFD1 "Uncharacterized protei... 119 0.00054 1
MGI|MGI:1913660 - symbol:Mterfd1 "MTERF domain containing... 117 0.00089 1
UNIPROTKB|E2RL82 - symbol:MTERFD1 "Uncharacterized protei... 117 0.00091 1
>TAIR|locus:2049329 [details] [associations]
symbol:EMB2219 "embryo defective 2219" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] GO:GO:0009506 GO:GO:0009507
EMBL:CP002685 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 IPI:IPI00895653 RefSeq:NP_179763.3 UniGene:At.39539
ProteinModelPortal:F4IHL3 PRIDE:F4IHL3 EnsemblPlants:AT2G21710.1
GeneID:816708 KEGG:ath:AT2G21710 OMA:EMIADFP ArrayExpress:F4IHL3
Uniprot:F4IHL3
Length = 641
Score = 1903 (674.9 bits), Expect = 1.6e-196, P = 1.6e-196
Identities = 351/509 (68%), Positives = 439/509 (86%)
Query: 23 SNDNDGGDVDEELIMKALDIRRQVTAEIFKEAMWRKGKFGITYSTNVADRLPDFIDHVMI 82
S+ +D G+ + E+I+KAL+IRR+VT EI KE++ RKG+FGITY+TNV DRL DF+DHVMI
Sbjct: 126 SDGDDDGESEREMIVKALEIRRKVTKEIIKESLVRKGRFGITYATNVTDRLGDFVDHVMI 185
Query: 83 KAAALKKLPEFADSSFNVRAKWFIEDSNVVPLIRWLKHNGLSYPKIAKLICMSGGNLESI 142
+AAALK+LPEF++S FN+RA+ IEDSN VPL+RWLKH+ LSY +IAK+ICMS GNL+SI
Sbjct: 186 QAAALKRLPEFSESRFNLRARTVIEDSNFVPLVRWLKHHELSYNRIAKIICMSKGNLDSI 245
Query: 143 RHLAEWLKSVHVKGEFLGVALLKTGGNILERSIEELNEIVEYLETNGVRRDWMGYVMSRC 202
R + EWLKS+HVKGEF+ VA L++G NIL+R+ EELNEIVEYLE+NGVRRDWMGYV+ RC
Sbjct: 246 RIMIEWLKSIHVKGEFIAVAFLRSGDNILQRNREELNEIVEYLESNGVRRDWMGYVVGRC 305
Query: 203 PQLLSQSIEEVKTRVHFYLDMGMNKNDFGTMVFDYPKILGFLTLEEMHQKVTYLKEFGLS 262
P+LLS S+EEVK+RV F+L MGMN+NDFGTMV+DYPKI+GF + + M +K+ YLKEFGLS
Sbjct: 306 PELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKIIGFFSFQVMEKKINYLKEFGLS 365
Query: 263 TEDVGRLLAFRPHLMGCGIGERWKPLVKYLYYLGVSRDGMRRMLVIKPMVFCFDLETTIV 322
TE+VGRLLA++PHLMGC I ERWKPLVKY YYLG+ ++GM+R+LV+KP+++C DLE TI
Sbjct: 366 TEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIA 425
Query: 323 PKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYKKIRPVVIFLMTKAGVSERDIGKCLALG 382
PKVRF Q++G+ +E I NMLVKFPSLLT SLYKKIRPVVIFL+T+AGV+++DIGK +A+
Sbjct: 426 PKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMD 485
Query: 383 PELLGCSIGNKLEVNVKYFLSLGIKLHQLGAMIADFPMLLRYNIDIFRPKYRYLRRTMVR 442
P LLGCSIG KLE N++Y++SLGI+ +QLG MIADFPMLLRYN+D RPKYRYLRRTM+R
Sbjct: 486 PALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIR 545
Query: 443 PLQDLIEFPRFFSYSLEERIIPRHKIMVENRVNFKLRYMLACSNEEFNQKVADKVEGRRL 502
PLQDLIEFPRFFSYSLE RIIPRH IMVENRVNFKLRYMLAC++EEF ++V DKVE R
Sbjct: 546 PLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEFERRVRDKVERRER 605
Query: 503 YELGLINEAPHSQTVDDSLRQQDAVDYTD 531
+E GL +E SQ D+++ Q+ + ++D
Sbjct: 606 FEAGLDSE--DSQPSDENISDQE-IAFSD 631
>TAIR|locus:2139394 [details] [associations]
symbol:BSM "AT4G02990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0009536 "plastid" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0032502 "developmental
process" evidence=IMP] [GO:0042793 "transcription from plastid
promoter" evidence=IMP] [GO:0042794 "rRNA transcription from
plastid promoter" evidence=IMP] GO:GO:0009536 EMBL:CP002687
GO:GO:0008380 GO:GO:0009790 EMBL:AF069442 EMBL:AL161495 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 HOGENOM:HOG000241428
ProtClustDB:PLN03196 IPI:IPI00547639 PIR:T01394 RefSeq:NP_192208.1
UniGene:At.10877 ProteinModelPortal:Q9ZT96 SMR:Q9ZT96 STRING:Q9ZT96
PRIDE:Q9ZT96 EnsemblPlants:AT4G02990.1 GeneID:828116
KEGG:ath:AT4G02990 TAIR:At4g02990 InParanoid:Q9ZT96 OMA:FPAFFTY
PhylomeDB:Q9ZT96 ArrayExpress:Q9ZT96 Genevestigator:Q9ZT96
GO:GO:0042794 Uniprot:Q9ZT96
Length = 541
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 90/320 (28%), Positives = 170/320 (53%)
Query: 181 IVEYLETNGVRRDWMGYVMSRCPQLLSQSIE-EVKTRVHFYLDMGMNKNDFGTMVFDYPK 239
+++YL GVR+ + R PQ+L S+ ++ V + + + +D ++ YP+
Sbjct: 182 VLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVIDLAPVVKYLQGLDIKPSDVPRVLERYPE 241
Query: 240 ILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYYLGVSR 299
+LGF M V YL G++ ++G +L P ++G + KPLV+YL LG+ R
Sbjct: 242 VLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVARIIKPLVEYLEVLGIPR 301
Query: 300 DGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYKKIRP 359
R++ +P + F+L+ T+ P V+ QD VR+ + +++ ++P ++ L K+
Sbjct: 302 LAAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLPSIIAQYPEIIGIDLKPKLDT 361
Query: 360 VVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKYFLSLGIKLHQLGAMIADFP 419
L + ++ D+G + P+ + S L+ ++ + G + Q M+ P
Sbjct: 362 QRKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLK-HIDFLTKCGFSIDQTREMVIGCP 420
Query: 420 MLLRYNIDIFRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRHKIMVENRVNFKLR 479
+L N+ I + + Y ++ M RPLQDL++FP FF+Y LE + PRHK +++ + L
Sbjct: 421 QVLALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKKGIKCSLA 480
Query: 480 YMLACSNEEFNQKVA-DKVE 498
+ML CS+E+F Q+++ D ++
Sbjct: 481 WMLNCSDEKFEQRMSYDTID 500
Score = 199 (75.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 67/260 (25%), Positives = 118/260 (45%)
Query: 206 LSQSIEEVKTRVHFYLDMGMNKNDFGTMVFDYPKILGFLTLEEMHQKVTYLKEFGLSTED 265
L + + +K RV F +G+ D +YP +LG + M + YL + G+
Sbjct: 140 LPVTADVMKERVEFLHKLGLTIEDIN----NYPLVLGCSVKKNMVPVLDYLGKLGVRKST 195
Query: 266 VGRLLAFRPHLMGCGIGERWKPLVKYLYYLGVSRDGMRRMLVIKPMVFCFDLETTIVPKV 325
L P ++ + P+VKYL L + + R+L P V F LE T+ V
Sbjct: 196 FTEFLRRYPQVLHSSVVIDLAPVVKYLQGLDIKPSDVPRVLERYPEVLGFKLEGTMSTSV 255
Query: 326 RFFQDIGVRDEGIANMLVKFPSLLTYSLYKKIRPVVIFLMTKAGVSERDIGKCLALGPEL 385
+ IGV I +L ++P +L + + I+P+V +L G+ + + P +
Sbjct: 256 AYLVGIGVARREIGGILTRYPEILGMRVARIIKPLVEYLEV-LGIPRLAAARLIEKRPHI 314
Query: 386 LGCSIGNKLEVNVKYFLSLGIKLHQLGAMIADFPMLLRYNIDIFRPKYRYLRRTM----- 440
LG + + ++ NV+ ++ L ++IA +P ++ ID+ +PK R+ +
Sbjct: 315 LGFELDDTVKPNVQILQDFNVRETSLPSIIAQYPEII--GIDL-KPKLDTQRKLLCSAIH 371
Query: 441 VRP--LQDLIE-FPRFFSYS 457
+ P L LIE P+F S S
Sbjct: 372 LNPEDLGSLIERMPQFVSLS 391
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 62/270 (22%), Positives = 134/270 (49%)
Query: 170 ILERSIE-ELNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIE-EVKTRVHFYLDMGMNK 227
+L S+ +L +V+YL+ ++ + V+ R P++L +E + T V + + +G+ +
Sbjct: 206 VLHSSVVIDLAPVVKYLQGLDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVAR 265
Query: 228 NDFGTMVFDYPKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKP 287
+ G ++ YP+ILG + V YL+ G+ RL+ RPH++G + + KP
Sbjct: 266 REIGGILTRYPEILGMRVARIIKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKP 325
Query: 288 LVKYLYYLGVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFF-QDIGVRDEGIANMLVKFP 346
V+ L V + ++ P + DL+ + + + I + E + +++ + P
Sbjct: 326 NVQILQDFNVRETSLPSIIAQYPEIIGIDLKPKLDTQRKLLCSAIHLNPEDLGSLIERMP 385
Query: 347 SLLTYSLYKKIRPVVIFLMTKAGVSERDIGKCLALG-PELLGCSIGNKLEVNVKYFLSLG 405
++ S ++ + FL TK G S D + + +G P++L ++G ++++ +YF
Sbjct: 386 QFVSLSESPMLKHID-FL-TKCGFSI-DQTREMVIGCPQVLALNLGI-MKLSFEYFQK-E 440
Query: 406 IKLHQLGAMIADFPMLLRYNID-IFRPKYR 434
+K L ++ DFP Y ++ +P+++
Sbjct: 441 MK-RPLQDLV-DFPAFFTYGLESTVKPRHK 468
Score = 146 (56.5 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 57/214 (26%), Positives = 96/214 (44%)
Query: 159 LGVALLKTGGNILERSIEELN--------EIVEYLETNGVRRDWMGYVMSRCPQLLSQSI 210
+GVA + GG IL R E L +VEYLE G+ R ++ + P +L +
Sbjct: 261 IGVARREIGG-ILTRYPEILGMRVARIIKPLVEYLEVLGIPRLAAARLIEKRPHILGFEL 319
Query: 211 EE-VKTRVHFYLDMGMNKNDFGTMVFDYPKILGFLTLEEMH-QKVTYLKEFGLSTEDVGR 268
++ VK V D + + +++ YP+I+G ++ Q+ L+ ED+G
Sbjct: 320 DDTVKPNVQILQDFNVRETSLPSIIAQYPEIIGIDLKPKLDTQRKLLCSAIHLNPEDLGS 379
Query: 269 LLAFRPHLMGCGIGERWKPLVKYLYYL---GVSRDGMRRMLVIKPMVFCFDLETTIVPKV 325
L+ P + + E P++K++ +L G S D R M++ P V +L +
Sbjct: 380 LIERMPQFVS--LSE--SPMLKHIDFLTKCGFSIDQTREMVIGCPQVLALNLGIMKL-SF 434
Query: 326 RFFQDIGVRDEGIANMLVKFPSLLTYSLYKKIRP 359
+FQ R LV FP+ TY L ++P
Sbjct: 435 EYFQKEMKRP---LQDLVDFPAFFTYGLESTVKP 465
>TAIR|locus:2051814 [details] [associations]
symbol:AT2G44020 "AT2G44020" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004005
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
EMBL:AY039920 EMBL:AY079380 IPI:IPI00516323 PIR:T00682
RefSeq:NP_566005.1 UniGene:At.19499 UniGene:At.71899
ProteinModelPortal:O80572 SMR:O80572 PaxDb:O80572 PRIDE:O80572
EnsemblPlants:AT2G44020.1 GeneID:819007 KEGG:ath:AT2G44020
TAIR:At2g44020 eggNOG:NOG235651 HOGENOM:HOG000241428
InParanoid:O80572 OMA:YFTYSLE PhylomeDB:O80572 ProtClustDB:PLN03196
ArrayExpress:O80572 Genevestigator:O80572 Uniprot:O80572
Length = 507
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 93/359 (25%), Positives = 177/359 (49%)
Query: 176 EELNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIE-EVKTRVHFYLDMGMNKNDFGTMV 234
+ L ++ YLE G+ R +G + PQ+L S+ E+ V F + + K D G ++
Sbjct: 142 KNLIPVLAYLEKIGISRSKLGEFVKNYPQVLHASVVVELAPVVKFLRGLDVEKQDLGYVL 201
Query: 235 FDYPKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYY 294
YP++LGF M V YL G+S D+G ++ P+L+G +G KPLV YL
Sbjct: 202 MKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLLGMRVGTMIKPLVDYLIS 261
Query: 295 LGVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLY 354
+G+ + + RML + + ++LE T+ P V GV+ E + ++ ++P +L +
Sbjct: 262 IGLPKKIVARMLEKRSYIVGYNLEETVKPNVDCLISFGVKKELLPLLIAQYPQILGLPVK 321
Query: 355 KKIRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKYFLSLGIKLHQLGAM 414
K+ F K + + + P+++ N + +++ L ++ + M
Sbjct: 322 AKMSTQQYFFSLKLKIDPEGFARVVEKMPQIVSLK-QNVIMKPIEFLLGRAFQVEDIAKM 380
Query: 415 IADFPMLLRYNIDIFRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRHKIMVENRV 474
+ P +L +++ + Y + + M RP+++L+E+P +F+YSLE RI PR++ + +
Sbjct: 381 VVRCPQILCSRVELMKNSYYFYKTEMGRPMKELVEYPEYFTYSLESRIKPRYQKLQSKGI 440
Query: 475 NFKLRYMLACSNEEFNQKVADK-----VEGRRLYELGLINEAPHSQTVDDSLRQQDAVD 528
L + L CS++ F +++ EG +++G E P + V D ++D D
Sbjct: 441 RSSLNWFLNCSDQRFEERLQGNFIDPDTEGPT-FDMGGKLEMPGGEIVTDE--EEDESD 496
Score = 255 (94.8 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 89/355 (25%), Positives = 170/355 (47%)
Query: 115 IRWLKHNGLSYPKIAKLICMSGGNL-ESIRHLAEWLKSVHVKGEFLGVALLKTGGNILER 173
+ +L+ GL+ I + M G ++ +++ + +L+ + + LG +K +L
Sbjct: 116 VEFLQKLGLTIDDINEYPLMLGCSVRKNLIPVLAYLEKIGISRSKLG-EFVKNYPQVLHA 174
Query: 174 SIE-ELNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIE-EVKTRVHFYLDMGMNKNDFG 231
S+ EL +V++L V + +GYV+ + P+LL +E + T V + + +G++ D G
Sbjct: 175 SVVVELAPVVKFLRGLDVEKQDLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIG 234
Query: 232 TMVFDYPKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKY 291
MV YP +LG + V YL GL + V R+L R +++G + E KP V
Sbjct: 235 PMVTQYPYLLGMRVGTMIKPLVDYLISIGLPKKIVARMLEKRSYIVGYNLEETVKPNVDC 294
Query: 292 LYYLGVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQ-DIGVRDEGIANMLVKFPSLLT 350
L GV ++ + ++ P + ++ + + FF + + EG A ++ K P +++
Sbjct: 295 LISFGVKKELLPLLIAQYPQILGLPVKAKMSTQQYFFSLKLKIDPEGFARVVEKMPQIVS 354
Query: 351 YSLYKKIRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKYFLS--LGIKL 408
++P+ FL+ +A E DI K + P++L CS +L N YF +G +
Sbjct: 355 LKQNVIMKPIE-FLLGRAFQVE-DIAKMVVRCPQIL-CS-RVELMKNSYYFYKTEMGRPM 410
Query: 409 HQLGAMIADFPMLLRYNIDI-FRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERI 462
+L ++P Y+++ +P+Y+ L+ +R L F EER+
Sbjct: 411 KEL----VEYPEYFTYSLESRIKPRYQKLQSKGIR--SSLNWFLNCSDQRFEERL 459
Score = 217 (81.4 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 61/243 (25%), Positives = 119/243 (48%)
Query: 180 EIVEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVHFYLDMGMNKNDFGTMVFDYPK 239
+I +YL+ G+ D + + L +IE + RV F +G+ +D +YP
Sbjct: 85 KICDYLKGLGIITDELESIE------LPSTIEVMCERVEFLQKLGLTIDDIN----EYPL 134
Query: 240 ILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYYLGVSR 299
+LG + + + YL++ G+S +G + P ++ + P+VK+L L V +
Sbjct: 135 MLGCSVRKNLIPVLAYLEKIGISRSKLGEFVKNYPQVLHASVVVELAPVVKFLRGLDVEK 194
Query: 300 DGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYKKIRP 359
+ +L+ P + F LE T+ V + IGV I M+ ++P LL + I+P
Sbjct: 195 QDLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLLGMRVGTMIKP 254
Query: 360 VVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKYFLSLGIKLHQLGAMIADFP 419
+V +L++ G+ ++ + + L ++G ++ ++ NV +S G+K L +IA +P
Sbjct: 255 LVDYLIS-IGLPKKIVARMLEKRSYIVGYNLEETVKPNVDCLISFGVKKELLPLLIAQYP 313
Query: 420 MLL 422
+L
Sbjct: 314 QIL 316
Score = 216 (81.1 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 76/284 (26%), Positives = 142/284 (50%)
Query: 153 HVKGEFLGVALLKTGGNILERSIEELNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIEE 212
++KG LG+ + L +IE + E VE+L+ G+ D ++ P +L S+ +
Sbjct: 89 YLKG--LGIITDELESIELPSTIEVMCERVEFLQKLGLTID----DINEYPLMLGCSVRK 142
Query: 213 VKTRVHFYLD-MGMNKNDFGTMVFDYPKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLA 271
V YL+ +G++++ G V +YP++L + E+ V +L+ + +D+G +L
Sbjct: 143 NLIPVLAYLEKIGISRSKLGEFVKNYPQVLHASVVVELAPVVKFLRGLDVEKQDLGYVLM 202
Query: 272 FRPHLMGCGIGERWKPLVKYLYYLGVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQDI 331
P L+G + V YL +GVS + M+ P + + T I P V + I
Sbjct: 203 KYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLLGMRVGTMIKPLVDYLISI 262
Query: 332 GVRDEGIANMLVKFPSLLTYSLYKKIRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIG 391
G+ + +A ML K ++ Y+L + ++P V L++ GV + + +A P++LG +
Sbjct: 263 GLPKKIVARMLEKRSYIVGYNLEETVKPNVDCLIS-FGVKKELLPLLIAQYPQILGLPVK 321
Query: 392 NKLEVNVKYFLSLGIKLHQLG-AMIAD-FPML--LRYNIDIFRP 431
K+ +YF SL +K+ G A + + P + L+ N+ I +P
Sbjct: 322 AKMSTQ-QYFFSLKLKIDPEGFARVVEKMPQIVSLKQNV-IMKP 363
Score = 161 (61.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 70/308 (22%), Positives = 143/308 (46%)
Query: 110 NVVPLIRWLKHNGLSYPKIAKLI-----CMSGGNLESIRHLAEWLKSVHVKGEFLGVALL 164
N++P++ +L+ G+S K+ + + + + + + ++L+ + V+ + LG L+
Sbjct: 143 NLIPVLAYLEKIGISRSKLGEFVKNYPQVLHASVVVELAPVVKFLRGLDVEKQDLGYVLM 202
Query: 165 KTGGNILERSIE-ELNEIVEYLETNGVR-RDWMGYVMSRCPQLLSQSIEE-VKTRVHFYL 221
K +L +E ++ V YL + GV RD +G ++++ P LL + +K V + +
Sbjct: 203 KYP-ELLGFKLEGTMSTSVAYLVSIGVSPRD-IGPMVTQYPYLLGMRVGTMIKPLVDYLI 260
Query: 222 DMGMNKNDFGTMVFDYPKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGI 281
+G+ K M+ I+G+ E + V L FG+ E + L+A P ++G +
Sbjct: 261 SIGLPKKIVARMLEKRSYIVGYNLEETVKPNVDCLISFGVKKELLPLLIAQYPQILGLPV 320
Query: 282 GERWKPLVKYLYYLGVSRD--GMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIA 339
+ +Y + L + D G R++ P + + I+ + F + E IA
Sbjct: 321 KAKMSTQ-QYFFSLKLKIDPEGFARVVEKMPQIVSLK-QNVIMKPIEFLLGRAFQVEDIA 378
Query: 340 NMLVKFPSLLTYSLYKKIRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVK 399
M+V+ P +L S + ++ F T+ G R + K L PE S+ ++++ +
Sbjct: 379 KMVVRCPQILC-SRVELMKNSYYFYKTEMG---RPM-KELVEYPEYFTYSLESRIKPRYQ 433
Query: 400 YFLSLGIK 407
S GI+
Sbjct: 434 KLQSKGIR 441
>TAIR|locus:2207420 [details] [associations]
symbol:AT1G78930 "AT1G78930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009507 "chloroplast" evidence=IDA] EMBL:CP002684
GO:GO:0009507 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 EMBL:AK228193 IPI:IPI00543979 RefSeq:NP_178014.2
UniGene:At.34214 ProteinModelPortal:Q0WRV2 SMR:Q0WRV2 PRIDE:Q0WRV2
EnsemblPlants:AT1G78930.1 GeneID:844232 KEGG:ath:AT1G78930
TAIR:At1g78930 HOGENOM:HOG000084735 InParanoid:Q0WRV2 OMA:PHILGCS
PhylomeDB:Q0WRV2 ProtClustDB:CLSN2680664 Genevestigator:Q0WRV2
Uniprot:Q0WRV2
Length = 591
Score = 360 (131.8 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 102/356 (28%), Positives = 185/356 (51%)
Query: 139 LESIRHLAEWLKSVHVKGEFLGVALLKTGGNILERSIE-ELNEIVEYLETNGVRRDWMGY 197
+E+ R + L SV FL L++ +L S E ++ +VE+LE+ G+ + +G
Sbjct: 228 IEARRGGLDMLGSVDASFRFL----LESFPRLLLLSEENDMKPMVEFLESIGIPKYCLGK 283
Query: 198 VMSRCPQLLSQSIEEVKTRVHFYLD-MGMNKNDFGTMVFDYPKILGFLTLEEMHQKV-TY 255
V+ P ++ EE+K RV ++ + + D G ++ YP IL +++E + + ++
Sbjct: 284 VLLLYPPIMLGKTEEIKRRVATAMEKVSVVNKDSGKLLLKYPWILS-PSIQENYSHIGSF 342
Query: 256 LKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYYLGVSRDGMRRMLVIKP-MVFC 314
+ D+ + P L+GC + +VK LGV M +++ P ++ C
Sbjct: 343 FYSESVLKMDIDHAIRRWPLLLGCS-ASNMEMMVKEFDKLGVRDKRMGKVIPKMPQLLLC 401
Query: 315 FDLETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYKKIRPVVIFLMTKAGVSERD 374
E V V F +D+G + E + +L + P + S+ K ++ +IFL T+ GVS
Sbjct: 402 KPQEFLKV--VCFLEDLGFQKEIVGQILCRCPEIFGCSIEKTLQKKLIFL-TRFGVSTTH 458
Query: 375 IGKCLALGPELLGCSIGNKLEVNVKYFLSLGIKLHQLGAMIADFPMLLRYNID-IFRPKY 433
+ + PE L + +KY + +GI ++ MI F +L Y+ID + RPK+
Sbjct: 459 FPRIIKKYPEFLIYDADKTVLPRLKYLMEIGISEREIAFMIRKFSPILGYSIDKVLRPKF 518
Query: 434 RYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRHKIMVENRVNFKLRYMLACSNEEF 489
+L +M +P++++IE+PR+FSYSLE+RI PR +++ + L+ ML ++EEF
Sbjct: 519 EFLVNSMEKPVREVIEYPRYFSYSLEKRIKPRFRVLKGRNIECTLQEMLGKNDEEF 574
Score = 238 (88.8 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 70/275 (25%), Positives = 136/275 (49%)
Query: 107 EDSNVVPLIRWLKHNGLSYPKIAKLICMSG----GNLESI-RHLAEWLKSVHVKGEFLGV 161
E++++ P++ +L+ G+ + K++ + G E I R +A ++ V V + G
Sbjct: 260 EENDMKPMVEFLESIGIPKYCLGKVLLLYPPIMLGKTEEIKRRVATAMEKVSVVNKDSGK 319
Query: 162 ALLKTGGNILERSIEE-LNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVHFY 220
LLK IL SI+E + I + + V + + + + R P LL S ++ V +
Sbjct: 320 LLLKYPW-ILSPSIQENYSHIGSFFYSESVLKMDIDHAIRRWPLLLGCSASNMEMMVKEF 378
Query: 221 LDMGMNKNDFGTMVFDYPKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCG 280
+G+ G ++ P++L +E + V +L++ G E VG++L P + GC
Sbjct: 379 DKLGVRDKRMGKVIPKMPQLL-LCKPQEFLKVVCFLEDLGFQKEIVGQILCRCPEIFGCS 437
Query: 281 IGERWKPLVKYLYYLGVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIAN 340
I + + + +L GVS R++ P +D + T++P++++ +IG+ + IA
Sbjct: 438 IEKTLQKKLIFLTRFGVSTTHFPRIIKKYPEFLIYDADKTVLPRLKYLMEIGISEREIAF 497
Query: 341 MLVKFPSLLTYSLYKKIRPVVIFLMTKAGVSERDI 375
M+ KF +L YS+ K +RP FL+ R++
Sbjct: 498 MIRKFSPILGYSIDKVLRPKFEFLVNSMEKPVREV 532
>TAIR|locus:505006461 [details] [associations]
symbol:MDA1 "AT4G14605" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006970 "response to osmotic
stress" evidence=IMP] [GO:0009651 "response to salt stress"
evidence=IMP] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
GO:GO:0009737 EMBL:CP002687 GO:GO:0009651 GO:GO:0009658 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 IPI:IPI00532745
RefSeq:NP_567435.4 UniGene:At.33263 ProteinModelPortal:F4JVI3
SMR:F4JVI3 PRIDE:F4JVI3 EnsemblPlants:AT4G14605.1 GeneID:827109
KEGG:ath:AT4G14605 OMA:HLVSRLH PhylomeDB:F4JVI3 Uniprot:F4JVI3
Length = 493
Score = 318 (117.0 bits), Expect = 3.4e-26, P = 3.4e-26
Identities = 78/301 (25%), Positives = 158/301 (52%)
Query: 199 MSRCPQLLSQSIEEVKTRVHFYLDMGMNKNDFGTMVFDYPKILGFLTLE-EMHQKVTYLK 257
+SR +L ++ ++ + + LD+G+N T+ + + +L+ ++ V +L
Sbjct: 184 VSRVSELDTEGA--LRPQTLYLLDLGLNLEQIKTITRKFAAF-PYYSLDGKIKPVVEFLL 240
Query: 258 EFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYYLGVSRDGMRRMLVIKPMVFCFDL 317
+ G+ D+ +L RP + G + + KP + +L LG+ ++ +++ P + +
Sbjct: 241 DLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYSR 300
Query: 318 ETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYKKIRPVVIFLMTKAGVSERDIGK 377
+ + V F G+ +E I +L + P++++YS+ K+RP + + + V D+
Sbjct: 301 QK-LTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRS-LNV---DVAV 355
Query: 378 CLALGPELLGCSIGNKLEVNVKYFLSLGIKLHQLGAMIADFPMLLRYNI-DIFRPKYRYL 436
L P+ G SI + L+ ++FL G L ++G MI+ + L +++ + PK+ Y
Sbjct: 356 LLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYF 415
Query: 437 RRTMVRPLQDLIEFPRFFSYSLEERIIPRHKIMVENRVNFKLRYMLACSNEEFNQKVADK 496
+ TM P +L++FP+FF YSL+ERI PR++++ + V L +L+ S EF + V K
Sbjct: 416 Q-TMDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSLSGIEFEKVVKKK 474
Query: 497 V 497
+
Sbjct: 475 M 475
Score = 193 (73.0 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 53/234 (22%), Positives = 116/234 (49%)
Query: 177 ELNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSI-EEVKTRVHFYLDMGMNKNDFGTMVF 235
++ +VE+L G+ + + ++ + PQ+ S+ + +K + F +G++KN + ++
Sbjct: 231 KIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIIS 290
Query: 236 DYPKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYYL 295
+P IL + + +++ V +L + GL+ E +GR+L P++M + ++ +P ++Y L
Sbjct: 291 RFPAILTY-SRQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSL 349
Query: 296 GVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYK 355
V + +L P F +E+ + P FF + G + I M+ ++ +L T+SL +
Sbjct: 350 NVD---VAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKE 406
Query: 356 KIRPVVIFLMTKAGVSERDIGKC-LALGPELLGCSIGNKLEVNVKYFLSLGIKL 408
+ P + T D K L P+ G S+ +++ + G++L
Sbjct: 407 NVMPKWDYFQTM------DYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRL 454
Score = 179 (68.1 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 48/195 (24%), Positives = 93/195 (47%)
Query: 176 EELNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVHFYLDMGMNKNDFGTMVF 235
+ L + +LET G+ ++ ++SR P +L+ S +++ + V F G+ + G ++
Sbjct: 266 DNLKPTMAFLETLGIDKNQWAKIISRFPAILTYSRQKLTSTVEFLSQTGLTEEQIGRILT 325
Query: 236 DYPKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYYL 295
P I+ + +++ + Y + + DV LL P G I KP+ ++
Sbjct: 326 RCPNIMSYSVEDKLRPTMEYFRSLNV---DVAVLLHRCPQTFGLSIESNLKPVTEFFLEK 382
Query: 296 GVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYK 355
G D + M+ ++ F L+ ++PK +FQ + + LVKFP YSL +
Sbjct: 383 GFGLDEIGIMISRYGALYTFSLKENVMPKWDYFQTMDYPK----SELVKFPQFFGYSLQE 438
Query: 356 KIRPVVIFLMTKAGV 370
+I+P L+ ++GV
Sbjct: 439 RIKPRYE-LVQRSGV 452
>TAIR|locus:2039240 [details] [associations]
symbol:EMB3114 "AT2G36000" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009507 "chloroplast" evidence=IDA] GO:GO:0009507
EMBL:CP002685 GenomeReviews:CT485783_GR KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 EMBL:AY039871
EMBL:AY039888 EMBL:AY077666 IPI:IPI00529913 PIR:F84775
RefSeq:NP_850257.1 UniGene:At.21750 ProteinModelPortal:Q9SJ50
EnsemblPlants:AT2G36000.1 GeneID:818173 KEGG:ath:AT2G36000
TAIR:At2g36000 HOGENOM:HOG000149144 InParanoid:Q9SJ50 OMA:PTLYFLQ
PhylomeDB:Q9SJ50 ProtClustDB:CLSN2680066 Genevestigator:Q9SJ50
Uniprot:Q9SJ50
Length = 333
Score = 257 (95.5 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 78/249 (31%), Positives = 124/249 (49%)
Query: 245 TLEE-MHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYY--LGVSRDG 301
TLE +H+K+ YL G+ D L+ P L+ + + +V Y+ + +
Sbjct: 68 TLESSIHEKLIYLDSLGI---DFLTLINRHPPLLSTALSAV-ESVVDYMTTPPINFTLQD 123
Query: 302 MRRMLVIKPMVFCFDLETTIVPKVRFF-QDIGVRDE-GIANMLVKFPSLLTYSLYKKIRP 359
RR++ + P + L + +P + F +++GV + L + P LL S+ ++RP
Sbjct: 124 FRRLVSMCPELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRP 183
Query: 360 VVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKYFLSLGIKLHQLGAMIADFP 419
+ FL + G+ D K LL CS+ NKL + YF LG AM FP
Sbjct: 184 TLYFLQ-RIGIL--DPHK----HTYLLSCSVDNKLVPRIDYFEKLGFSRRSATAMFKRFP 236
Query: 420 MLLRYNI-DIFRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRHKIMVENRVNFKL 478
L Y+I + + PK +YL M R +++++EFP++FS+SLE RI PRH+ V F L
Sbjct: 237 QLFNYSIAENYEPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPL 296
Query: 479 RYMLACSNE 487
ML +NE
Sbjct: 297 PVMLK-TNE 304
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 50/226 (22%), Positives = 102/226 (45%)
Query: 141 SIRHLAEWLKSVHVKGEFLGVALLKTGGNILERSIEELNEIVEYLET---NGVRRDWMGY 197
SI +L S+ + +FL L+ +L ++ + +V+Y+ T N +D+
Sbjct: 72 SIHEKLIYLDSLGI--DFL--TLINRHPPLLSTALSAVESVVDYMTTPPINFTLQDFRRL 127
Query: 198 VMSRCPQLLSQSIEEVKTRVHFYL--DMGMNKN-DFGTMVFDYPKILGFLTLEEMHQKVT 254
V S CP+LL+ + V +L ++G++ D + P++L ++ +
Sbjct: 128 V-SMCPELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPTLY 186
Query: 255 YLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYYLGVSRDGMRRMLVIKPMVFC 314
+L+ G+ D + +L+ C + + P + Y LG SR M P +F
Sbjct: 187 FLQRIGIL--DPHK----HTYLLSCSVDNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFN 240
Query: 315 FDLETTIVPKVRFFQ-DIGVRDEGIANMLVKFPSLLTYSLYKKIRP 359
+ + PK+++ ++G RD +++FP ++SL +I+P
Sbjct: 241 YSIAENYEPKLKYLMVEMG-RD---VREVLEFPQYFSFSLENRIKP 282
>TAIR|locus:2062328 [details] [associations]
symbol:AT2G34620 "AT2G34620" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC004077 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 IPI:IPI00545404
PIR:H84758 RefSeq:NP_181009.1 UniGene:At.37779
ProteinModelPortal:O64685 SMR:O64685 STRING:O64685 PaxDb:O64685
PRIDE:O64685 EnsemblPlants:AT2G34620.1 GeneID:818027
KEGG:ath:AT2G34620 TAIR:At2g34620 eggNOG:NOG301834
HOGENOM:HOG000239190 InParanoid:O64685 OMA:RCPALFT PhylomeDB:O64685
ProtClustDB:CLSN2683649 Genevestigator:O64685 Uniprot:O64685
Length = 303
Score = 246 (91.7 bits), Expect = 4.2e-20, P = 4.2e-20
Identities = 69/250 (27%), Positives = 128/250 (51%)
Query: 244 LTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYYLGVSRDGMR 303
+TL+ M +K+ L+ G+ D G+ L+ P L + + + ++ +L G+ + +
Sbjct: 51 VTLQ-MKEKILCLELMGI---DSGKALSLNPCLCSAPL-DSIQSVLHFLQSKGIYPNDLP 105
Query: 304 RMLVIKPMVFCFDLETTIVPKVRFFQ-DIGVRDEGIANMLVKFPSLLTYSLYKKIRPVVI 362
R+L + P + D+ T + P F D+ V + ++ K P LL S+ +++P +
Sbjct: 106 RILGMCPKILTSDVRTELYPVFMFLSNDLHVPENAFRRVIKKCPRLLISSVEDQLKPALF 165
Query: 363 FLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKYFLSLGIKLHQLGAMIADFPMLL 422
+L + G+ +D+ P LL S+ + L +++ S+G + MI P L
Sbjct: 166 YLQ-RLGL--KDLEALAYQDPILLVSSVEHTLIPKLRFLESIGFSRPEAIGMILRCPALF 222
Query: 423 RYNIDI-FRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRHKIMVENRVNFKLRYM 481
++I+ F+PK Y + L++L EFP++F++SLE+RI PRH +E + L M
Sbjct: 223 TFSIENNFKPKLDYFMSEIKGKLENLKEFPQYFAFSLEKRIKPRHLESMERGLELPLSLM 282
Query: 482 LACSNEEFNQ 491
L ++EEF Q
Sbjct: 283 LKSTDEEFEQ 292
Score = 170 (64.9 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 50/193 (25%), Positives = 98/193 (50%)
Query: 177 ELNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVHFYLDMGMNKNDFGTMVFD 236
++ E + LE G+ D G +S P L S ++ +++ +HF G+ ND ++
Sbjct: 54 QMKEKILCLELMGI--D-SGKALSLNPCLCSAPLDSIQSVLHFLQSKGIYPNDLPRILGM 110
Query: 237 YPKILGFLTLEEMHQKVTYLK-EFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYYL 295
PKIL E++ +L + + R++ P L+ + ++ KP + YL L
Sbjct: 111 CPKILTSDVRTELYPVFMFLSNDLHVPENAFRRVIKKCPRLLISSVEDQLKPALFYLQRL 170
Query: 296 GVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGV-RDEGIANMLVKFPSLLTYSLY 354
G+ +D + + P++ +E T++PK+RF + IG R E I M+++ P+L T+S+
Sbjct: 171 GL-KD-LEALAYQDPILLVSSVEHTLIPKLRFLESIGFSRPEAIG-MILRCPALFTFSIE 227
Query: 355 KKIRPVVIFLMTK 367
+P + + M++
Sbjct: 228 NNFKPKLDYFMSE 240
Score = 163 (62.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 42/187 (22%), Positives = 91/187 (48%)
Query: 175 IEELNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVHFYL--DMGMNKNDFGT 232
++ + ++ +L++ G+ + + ++ CP++L+ + V +L D+ + +N F
Sbjct: 84 LDSIQSVLHFLQSKGIYPNDLPRILGMCPKILTSDVRTELYPVFMFLSNDLHVPENAFRR 143
Query: 233 MVFDYPKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYL 292
++ P++L +++ + YL+ GL +D+ L P L+ + P +++L
Sbjct: 144 VIKKCPRLLISSVEDQLKPALFYLQRLGL--KDLEALAYQDPILLVSSVEHTLIPKLRFL 201
Query: 293 YYLGVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYS 352
+G SR M++ P +F F +E PK+ +F +G L +FP +S
Sbjct: 202 ESIGFSRPEAIGMILRCPALFTFSIENNFKPKLDYFMS---EIKGKLENLKEFPQYFAFS 258
Query: 353 LYKKIRP 359
L K+I+P
Sbjct: 259 LEKRIKP 265
>TAIR|locus:2056745 [details] [associations]
symbol:EMB93 "EMBRYO DEFECTIVE 93" species:3702
"Arabidopsis thaliana" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0071452 "cellular
response to singlet oxygen" evidence=IGI] GO:GO:0009507
EMBL:CP002685 GO:GO:0009793 GO:GO:0071452 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 EMBL:AY219044
EMBL:AY649248 IPI:IPI00531063 RefSeq:NP_178405.2 UniGene:At.41435
ProteinModelPortal:Q84X53 SMR:Q84X53 PRIDE:Q84X53
EnsemblPlants:AT2G03050.1 GeneID:814834 KEGG:ath:AT2G03050
TAIR:At2g03050 InParanoid:Q84X53 OMA:ELAEFPH PhylomeDB:Q84X53
ProtClustDB:CLSN2681137 Genevestigator:Q84X53 Uniprot:Q84X53
Length = 283
Score = 228 (85.3 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 69/243 (28%), Positives = 119/243 (48%)
Query: 251 QKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYYLGVSRDGMRRMLVIKP 310
+K+ YL++ + D + L P L I + L G+SR + R+L + P
Sbjct: 34 EKLIYLQDLNV---DPHKALRVNPSLRSAPISSVVS-VETLLSSTGLSRPAVGRILDMFP 89
Query: 311 MVFCFDLETTIVPKVRFFQ-DIGVRDEGIANMLVKFPSLLTYSLYKKIRPVVIFLMTKAG 369
+ D E+ I+P +RF +I + ++ I + + P LL S+ ++RP + FL T G
Sbjct: 90 DLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKT-LG 148
Query: 370 VSERDIGKCLALGPELLGCSIGNKLEVNVKYFLS-LGIKLHQLGAMIADFPMLLRYNIDI 428
RD + LL ++ L ++Y LG ++ M+ P LL Y++D
Sbjct: 149 FVGRDT--ITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDN 206
Query: 429 -FRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRHKIMVENRVNFKLRYMLACSNE 487
PK + M +++L FP++FS+SLE +I PRH+++ E+ + L ML S+
Sbjct: 207 NLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDG 266
Query: 488 EFN 490
+FN
Sbjct: 267 QFN 269
Score = 150 (57.9 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 45/199 (22%), Positives = 92/199 (46%)
Query: 164 LKTGGNILERSIEELNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIE-EVKTRVHFYL- 221
L+ ++ I + + L + G+ R +G ++ P LL+ E E+ + F
Sbjct: 50 LRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSN 109
Query: 222 DMGMNKNDFGTMVFDYPKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGI 281
++ +++ D + P++L ++ +T+LK G D + + L+ +
Sbjct: 110 EISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRDT--ITSRNTVLLVSNV 167
Query: 282 GERWKPLVKYLYY-LGVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIAN 340
P ++YL LG +R+ + +M+V P + + ++ +VPKV FF + G
Sbjct: 168 ERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKVEFFIE---EMRGDVK 224
Query: 341 MLVKFPSLLTYSLYKKIRP 359
L +FP ++SL +KI+P
Sbjct: 225 ELKRFPQYFSFSLERKIKP 243
>TAIR|locus:2162092 [details] [associations]
symbol:AT5G55580 "AT5G55580" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0048364 "root development" evidence=IMP]
[GO:0048367 "shoot system development" evidence=IMP] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0048364 GO:GO:0048367
EMBL:AB009050 eggNOG:NOG246142 KO:K15032 InterPro:IPR003690
Pfam:PF02536 SMART:SM00733 UniGene:At.27411 EMBL:AY062691
EMBL:BT000141 IPI:IPI00542422 RefSeq:NP_200369.1
ProteinModelPortal:Q9FM80 SMR:Q9FM80 PRIDE:Q9FM80
EnsemblPlants:AT5G55580.1 GeneID:835652 KEGG:ath:AT5G55580
TAIR:At5g55580 HOGENOM:HOG000084463 InParanoid:Q9FM80 OMA:RPRHRFL
PhylomeDB:Q9FM80 ProtClustDB:CLSN2686991 ArrayExpress:Q9FM80
Genevestigator:Q9FM80 Uniprot:Q9FM80
Length = 496
Score = 244 (91.0 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 81/306 (26%), Positives = 147/306 (48%)
Query: 237 YPKILGFLTLE-EMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGE-RWKPLVKYLYY 294
YP++ + ++ + + YL FGL ++ + H+ I + + YL
Sbjct: 171 YPRLAEEIDIDPKCVPLLDYLSTFGLKESHFVQM--YERHMPSLQINVFSAQERLDYLLS 228
Query: 295 LGVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLY 354
+GV ++RML+ +P + + +E + + F +G+ + I ++ PSL +YS+
Sbjct: 229 VGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVE 288
Query: 355 KKIRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEV--NVKY-FLS--LGIKLH 409
+RP + +L+ + G+ E D+GK + L P++L +L++ N +Y FLS LG
Sbjct: 289 NSLRPTIRYLIEEVGIKETDVGKVVQLSPQILV----QRLDITWNTRYMFLSKELGAPRD 344
Query: 410 QLGAMIADFPMLLRYNIDI-FRPKYRYLRRT-MVRP--LQDLIEFPRFFSYSLEERIIPR 465
+ M+ P LL Y+ID F P+ +LR M L+ L + S SLE+ + P+
Sbjct: 345 SVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPK 404
Query: 466 HKIMVE---NRVNFKLRYMLACSNEEFNQKVADKVEGRRLYELGLINEAPH--SQTV--D 518
+ +V N V+ +Y + S +Q++ + R L EL + + P S V D
Sbjct: 405 YMYLVNELNNEVHILTKYPMYLSLS-LDQRIRPR--HRFLVELKKVRKGPFPLSSLVPND 461
Query: 519 DSLRQQ 524
+S QQ
Sbjct: 462 ESFCQQ 467
Score = 222 (83.2 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 58/260 (22%), Positives = 124/260 (47%)
Query: 181 IVEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVHFYLDMGMNKNDFGTMVFDYPKI 240
+++YL T G++ + R L ++ + R+ + L +G+ D M+ P+I
Sbjct: 187 LLDYLSTFGLKESHFVQMYERHMPSLQINVFSAQERLDYLLSVGVKHRDIKRMLLRQPQI 246
Query: 241 LGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYY-LGVSR 299
L + + +++L G+ +G+++A P L + +P ++YL +G+
Sbjct: 247 LQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKE 306
Query: 300 DGMRRMLVIKPMVFCFDLETTIVPKVRFF-QDIGVRDEGIANMLVKFPSLLTYSLYKKIR 358
+ +++ + P + L+ T + F +++G + + M+ K P LL YS+
Sbjct: 307 TDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFL 366
Query: 359 PVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKYFLS-LGIKLHQLGAMIAD 417
P + FL + G+ DI K L ++L S+ + L+ Y ++ L ++H ++
Sbjct: 367 PRINFLRS-IGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVH----ILTK 421
Query: 418 FPMLLRYNIDI-FRPKYRYL 436
+PM L ++D RP++R+L
Sbjct: 422 YPMYLSLSLDQRIRPRHRFL 441
Score = 177 (67.4 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 64/266 (24%), Positives = 126/266 (47%)
Query: 108 DSNVVPLIRWLKHNGLSYPKIAKLICMSGGNLE----SIRHLAEWLKSVHVKGEFLGVAL 163
D VPL+ +L GL ++ +L+ S + ++L SV VK + L
Sbjct: 181 DPKCVPLLDYLSTFGLKESHFVQMYERHMPSLQINVFSAQERLDYLLSVGVKHRDIKRML 240
Query: 164 LKTGGNILERSIEE-LNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIEE-VKTRVHFYL 221
L+ IL+ ++E L + +L G+ +G +++ P L S S+E ++ + + +
Sbjct: 241 LRQP-QILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLI 299
Query: 222 D-MGMNKNDFGTMVFDYPKILGFLTLEEMHQKVTYL-KEFGLSTEDVGRLLAFRPHLMGC 279
+ +G+ + D G +V P+IL + + +L KE G + V +++ P L+
Sbjct: 300 EEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHY 359
Query: 280 GIGERWKPLVKYLYYLGVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIA 339
I + + P + +L +G+ + ++L V LE + PK + + + +E
Sbjct: 360 SIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVN-ELNNE--V 416
Query: 340 NMLVKFPSLLTYSLYKKIRPVVIFLM 365
++L K+P L+ SL ++IRP FL+
Sbjct: 417 HILTKYPMYLSLSLDQRIRPRHRFLV 442
>TAIR|locus:2153433 [details] [associations]
symbol:PTAC15 "AT5G54180" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009295 "nucleoid" evidence=IDA] [GO:0009508
"plastid chromosome" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0042793 "transcription from plastid promoter"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] EMBL:CP002688 GO:GO:0009507
EMBL:AB013387 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
GO:GO:0009508 EMBL:AY081343 EMBL:BT000254 IPI:IPI00519701
RefSeq:NP_200229.1 UniGene:At.29509 ProteinModelPortal:Q9FK23
PRIDE:Q9FK23 EnsemblPlants:AT5G54180.1 GeneID:835506
KEGG:ath:AT5G54180 TAIR:At5g54180 InParanoid:Q9FK23 OMA:DNIEMIC
PhylomeDB:Q9FK23 ProtClustDB:CLSN2686733 ArrayExpress:Q9FK23
Genevestigator:Q9FK23 Uniprot:Q9FK23
Length = 500
Score = 230 (86.0 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 86/339 (25%), Positives = 160/339 (47%)
Query: 169 NILERSIE-ELNEIVEYLETNGVRRDWMGYVMSRC--PQLLSQ-SIEEVKTRVHFYLDMG 224
++++ SI N+ V L +G+ ++ + +V+++ +LL Q S+E+++ + F G
Sbjct: 171 SVVDTSILLSFNQKVRLLLLHGIPKEKISHVLNKVYLNKLLYQKSVEDIERLISFLEPFG 230
Query: 225 MNKNDFGTMVFDYPKILGFLTLEEMHQKVTYLKEFGLSTED---VGRLLAFRPHLMGCGI 281
G ++ P IL ++ +V +++ LS ED G +L P ++ +
Sbjct: 231 ----GIG-IIARRPVILNSDLDSQLIPRVDFIRN--LSGEDDFATGTVLRRLPAILSYSV 283
Query: 282 GERWKPLVKYLY-YLGVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIAN 340
E V++L + G++ + + +++ + P V E + P++ F ++ G G+
Sbjct: 284 -EHMNGQVEFLKSFAGLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKECGFDSPGMFK 342
Query: 341 MLVKFPSLLTYSLYKKIRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKY 400
L K P +L S + + FL+ K G R A+G + S N V +
Sbjct: 343 FLSKAPLILALS-ENNLSHKLGFLV-KIGYKHRTKELAFAMGA-VTRTSSDNMQRV-IGL 398
Query: 401 FLSLGIKLHQLGAMIADFPMLLRYNIDIFRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEE 460
+LS G+ + AM P +L+YN K YL M R +++L+ FP F Y L+
Sbjct: 399 YLSYGLSFEDILAMSTKHPQVLQYNYTSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDS 458
Query: 461 RIIPRHKIMVENR-VNFKLRYMLACSNEEFNQKVADKVE 498
RI R++ +++R N L +L S E F+ K AD +E
Sbjct: 459 RIKHRYEEKLKSRGENMSLNKLLTVSAERFS-KAADNIE 496
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 60/291 (20%), Positives = 134/291 (46%)
Query: 135 SGGNLESIRHLAEWLKSVHVKGEFLGVALLKTGGNILERSIEELNEIVEYLETNGVRRDW 194
SG +ES+ L + + + E + L +I S++++ V L++ +
Sbjct: 74 SGSQIESLFSLFRDIGFIEEETEMI----LAKNPDIKSTSLDKIGARVASLQSLKINGFP 129
Query: 195 MGYVMSRCPQLLSQSIEEVKTRVHFYLDMGMNKNDFGTMVFDYPKILGFLTLEEMHQKVT 254
+ ++++CP LL+ EE + F +D + D +V ++ L +QKV
Sbjct: 130 LQGLIAKCPNLLTS--EEFDLVISFLVDELEGRLD-PELVERLLSVVDTSILLSFNQKVR 186
Query: 255 YLKEFGLSTEDVGRLL--AFRPHLMGCGIGERWKPLVKYLYYLGVSRDGMRRMLVIKPMV 312
L G+ E + +L + L+ E + L+ +L G G+ ++ +P++
Sbjct: 187 LLLLHGIPKEKISHVLNKVYLNKLLYQKSVEDIERLISFLEPFG----GIG-IIARRPVI 241
Query: 313 FCFDLETTIVPKVRFFQDIGVRDE-GIANMLVKFPSLLTYSLYKKIRPVVIFLMTKAGVS 371
DL++ ++P+V F +++ D+ +L + P++L+YS+ + + V FL + AG++
Sbjct: 242 LNSDLDSQLIPRVDFIRNLSGEDDFATGTVLRRLPAILSYSV-EHMNGQVEFLKSFAGLT 300
Query: 372 ERDIGKCLALGPELLGCSIGNKLEVNVKYFLSLGIKLHQLGAMIADFPMLL 422
+ K + + P ++ S KL +++ G + ++ P++L
Sbjct: 301 SEQVFKIVHVFPNVISTSKERKLRPRIEFLKECGFDSPGMFKFLSKAPLIL 351
>TAIR|locus:2087926 [details] [associations]
symbol:AT3G18870 "AT3G18870" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016556 "mRNA modification" evidence=RCA]
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP002039
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
HOGENOM:HOG000239190 EMBL:BT029467 IPI:IPI00540238
RefSeq:NP_188517.1 UniGene:At.21618 UniGene:At.71275
ProteinModelPortal:Q9LHN2 SMR:Q9LHN2 EnsemblPlants:AT3G18870.1
GeneID:821420 KEGG:ath:AT3G18870 TAIR:At3g18870 eggNOG:NOG268043
InParanoid:Q9LHN2 OMA:PAIFGYS PhylomeDB:Q9LHN2
ProtClustDB:CLSN2684540 Genevestigator:Q9LHN2 Uniprot:Q9LHN2
Length = 274
Score = 202 (76.2 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 54/208 (25%), Positives = 105/208 (50%)
Query: 289 VKYLYYLGVSRDGMRRMLVIKPMVFC--FDLETTIVPKVRFFQ-DIGVRDEGIANMLVKF 345
V L G+S + R++ + P +F FD+ + + P F ++G E ++V
Sbjct: 69 VNLLKSKGISDEDFPRLVFLCPQLFSPTFDI-SKLDPVFDFLTGELGASAEESRGLIVNC 127
Query: 346 PSLLTYSLYKKIRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKYFLSLG 405
P++L + +RP +++L + GV R++ + +L + KL +++ S+G
Sbjct: 128 PNILFSDVEYCLRPTLVYLK-ELGV--RNLNRASKTNAHVLNTRV-EKLRAKMRFLKSIG 183
Query: 406 IKLHQLGAMIADFPMLLRYNI-DIFRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIP 464
+ + + P + Y++ D RPK+ +L M R L++L +FP++F++SL +RI P
Sbjct: 184 FEHEEAARVCGRIPAIFGYSVEDNLRPKFEFLVYDMERELEELKKFPQYFAFSLGKRIRP 243
Query: 465 RHKIMVENRVNFKLRYMLACSNEEFNQK 492
RH + + V L ML +++F K
Sbjct: 244 RHWHLKKKNVRVSLSRMLMWGDQKFYSK 271
Score = 133 (51.9 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 47/183 (25%), Positives = 86/183 (46%)
Query: 182 VEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVHF-YL--DMGMNKNDFGTMVFDYP 238
V L++ G+ + ++ CPQL S + + K F +L ++G + + ++ + P
Sbjct: 69 VNLLKSKGISDEDFPRLVFLCPQLFSPTFDISKLDPVFDFLTGELGASAEESRGLIVNCP 128
Query: 239 KILGFLTLEE-MHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYYLGV 297
IL F +E + + YLKE G+ ++ R H++ + E+ + +++L +G
Sbjct: 129 NIL-FSDVEYCLRPTLVYLKELGV--RNLNRASKTNAHVLNTRV-EKLRAKMRFLKSIGF 184
Query: 298 SRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRD-EGIANMLVKFPSLLTYSLYKK 356
+ R+ P +F + +E + PK F V D E L KFP +SL K+
Sbjct: 185 EHEEAARVCGRIPAIFGYSVEDNLRPKFEFL----VYDMERELEELKKFPQYFAFSLGKR 240
Query: 357 IRP 359
IRP
Sbjct: 241 IRP 243
Score = 115 (45.5 bits), Expect = 0.00068, P = 0.00068
Identities = 45/194 (23%), Positives = 88/194 (45%)
Query: 253 VTYLKEFGLSTEDVGRLLAFRPHLMGCGIG-ERWKPLVKYLY-YLGVSRDGMRRMLVIKP 310
V LK G+S ED RL+ P L + P+ +L LG S + R ++V P
Sbjct: 69 VNLLKSKGISDEDFPRLVFLCPQLFSPTFDISKLDPVFDFLTGELGASAEESRGLIVNCP 128
Query: 311 MVFCFDLETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYKKIRPVVIFLMTKAGV 370
+ D+E + P + + +++GVR+ N K + + + +K+R + FL + G
Sbjct: 129 NILFSDVEYCLRPTLVYLKELGVRN---LNRASKTNAHVLNTRVEKLRAKMRFLKS-IGF 184
Query: 371 SERDIGKCLALGPELLGCSIGNKLEVNVKYFL-SLGIKLHQLGAMIADFPMLLRYNIDI- 428
+ + P + G S+ + L ++ + + +L +L FP +++
Sbjct: 185 EHEEAARVCGRIPAIFGYSVEDNLRPKFEFLVYDMERELEEL----KKFPQYFAFSLGKR 240
Query: 429 FRPKYRYLRRTMVR 442
RP++ +L++ VR
Sbjct: 241 IRPRHWHLKKKNVR 254
Score = 115 (45.5 bits), Expect = 0.00068, P = 0.00068
Identities = 45/201 (22%), Positives = 90/201 (44%)
Query: 198 VMSRCPQLL--SQSIEEVKTRVHFYLDMGMNKNDFGTMVFDYPKILG-FLTLEEMHQKVT 254
++ + P+L + + + + V+ G++ DF +VF P++ + ++
Sbjct: 48 IVPQNPRLAPPANDLSVILSAVNLLKSKGISDEDFPRLVFLCPQLFSPTFDISKLDPVFD 107
Query: 255 YLK-EFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYYLGVSRDGMRRMLVIKPMVF 313
+L E G S E+ L+ P+++ + +P + YL LGV + R V
Sbjct: 108 FLTGELGASAEESRGLIVNCPNILFSDVEYCLRPTLVYLKELGVRN--LNRASKTNAHVL 165
Query: 314 CFDLETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYKKIRPVVIFLMTKAGVSER 373
+E + K+RF + IG E A + + P++ YS+ +RP FL+ ER
Sbjct: 166 NTRVEK-LRAKMRFLKSIGFEHEEAARVCGRIPAIFGYSVEDNLRPKFEFLVYDM---ER 221
Query: 374 DIGKCLALGPELLGCSIGNKL 394
++ + L P+ S+G ++
Sbjct: 222 ELEE-LKKFPQYFAFSLGKRI 241
>TAIR|locus:2102827 [details] [associations]
symbol:AT3G46950 "AT3G46950" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL096859
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
UniGene:At.28750 UniGene:At.48743 HOGENOM:HOG000113939
ProtClustDB:CLSN2682053 EMBL:AY045902 EMBL:AY117265 IPI:IPI00540395
PIR:T12953 RefSeq:NP_190279.1 ProteinModelPortal:Q9STG7
PaxDb:Q9STG7 PRIDE:Q9STG7 EnsemblPlants:AT3G46950.1 GeneID:823848
KEGG:ath:AT3G46950 TAIR:At3g46950 eggNOG:NOG316991
InParanoid:Q9STG7 OMA:ENPPISS PhylomeDB:Q9STG7 ArrayExpress:Q9STG7
Genevestigator:Q9STG7 Uniprot:Q9STG7
Length = 450
Score = 189 (71.6 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 79/331 (23%), Positives = 154/331 (46%)
Query: 176 EELNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVHFYLDMGMN-KNDFGTMV 234
+ L +++L++ G + ++S P +L + EE V Y D + D ++
Sbjct: 118 KSLRPKLQFLKSRGASSSEVIEIVSNVPTILDKKGEE---SVSLYYDFVKDIMQDGKSLC 174
Query: 235 FDYPKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYY 294
P+ G + ++ L+E G+ + + LL R + CG E+++ +K +
Sbjct: 175 ISCPE--G--KKGNRIRNISVLRELGVPQKLLFSLLISRYQPV-CG-KEKFEESLKKVVD 228
Query: 295 LGVSRDGMRRMLVIKPMVFCFDL-ETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSL 353
+G D + V + + +++ E TI KV ++ +G + I + K+P L +S
Sbjct: 229 MGF--DPAKSKFV-EALHVVYEMSEKTIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFS- 284
Query: 354 YKKIRPVVIF-LMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKYFLSLGIKLHQLG 412
KKI +++F + K G+ E +I L P+ + S K+ +++ FL LG
Sbjct: 285 EKKI--ILMFETLKKCGLVEEEIISVLKSRPQCIRSS-EQKILDSIEMFLGLGFSRDDFK 341
Query: 413 AMIADFPMLLRYNIDIFRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRHKI---- 468
M+ +P Y+ + R K+ L + M PL+ ++ P YSLE+RI+PR +
Sbjct: 342 MMVKRYPCCTAYSGETLRKKFEVLVKMMNWPLEAVVMIPTVLGYSLEKRIVPRSNVIKAL 401
Query: 469 MVENRV---NFKLRYMLACSNEEFNQKVADK 496
M + + N + +L C+++EF ++ K
Sbjct: 402 MSKGLIGSENPPISSVLVCTDQEFLKRYVMK 432
>TAIR|locus:1006230704 [details] [associations]
symbol:AT1G62085 "AT1G62085" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC000375
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
IPI:IPI00517604 PIR:D96647 RefSeq:NP_974069.1 UniGene:At.66074
ProteinModelPortal:O04576 PaxDb:O04576 PRIDE:O04576
EnsemblPlants:AT1G62085.1 GeneID:2745844 KEGG:ath:AT1G62085
TAIR:At1g62085 eggNOG:NOG314882 HOGENOM:HOG000113939
InParanoid:O04576 OMA:ENNIRRN PhylomeDB:O04576
ProtClustDB:CLSN2682053 Genevestigator:O04576 Uniprot:O04576
Length = 461
Score = 187 (70.9 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 83/322 (25%), Positives = 149/322 (46%)
Query: 182 VEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVHFYLD-----MGMNKND-FGTMVF 235
+++L++ G R + +++S P++L + + KT + Y D + +K+ F +
Sbjct: 127 LQFLQSRGASRSELTHIVSTVPEILGKRGD--KT-ISIYYDFVKEIIEADKSSKFEKLCH 183
Query: 236 DYPKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYYL 295
P+ G E + V L+E G+ + LL H CG E ++ +K + +
Sbjct: 184 SLPE--GSKQ-ENKIRNVLVLRELGVPQRLLFPLL-ISDHQPVCG-KENFEESLKKVVEM 238
Query: 296 GVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYK 355
G + + ++ +V+ F + TI KV + +G + M K PS L +S K
Sbjct: 239 GFDPTTSKFVKALR-VVYRFR-DKTIEAKVNVCKSLGFSVGDVWAMFKKCPSFLNFSENK 296
Query: 356 KIRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKYFLSLGIKLHQLGAMI 415
++ + K G+ E D+ L P+ + S K+ +++ FL LG ++ AMI
Sbjct: 297 IVQTWET--LKKCGLLEDDVLSVLKKFPQCINAS-EQKIMNSIETFLGLGFSRDEV-AMI 352
Query: 416 AD-FPMLLRYNIDIFRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRHKI----MV 470
A FP L + + + K +L + M PL+ ++ P YSLE+R IPR + M
Sbjct: 353 AKRFPQCLILSAETVKKKTEFLVKKMNWPLKAVVSTPAVLGYSLEKRTIPRCNVIKALMS 412
Query: 471 ENRVNFKLRYM---LACSNEEF 489
+ + +L M L C+NEEF
Sbjct: 413 KGSLGSELPGMSSVLVCTNEEF 434
>TAIR|locus:2036843 [details] [associations]
symbol:AT1G61960 "AT1G61960" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC004392
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
HOGENOM:HOG000113939 ProtClustDB:CLSN2682053 EMBL:BT028981
IPI:IPI00521152 PIR:T02140 RefSeq:NP_176387.1 UniGene:At.36342
ProteinModelPortal:O80701 PaxDb:O80701 PRIDE:O80701
EnsemblPlants:AT1G61960.1 GeneID:842491 KEGG:ath:AT1G61960
TAIR:At1g61960 eggNOG:NOG329656 InParanoid:O80701 OMA:ITHTFET
PhylomeDB:O80701 Genevestigator:O80701 Uniprot:O80701
Length = 457
Score = 183 (69.5 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 62/291 (21%), Positives = 137/291 (47%)
Query: 182 VEYLETNGVRRDWMGYVMSRCPQLLSQ-SIEEVKTRVHFYLDM--GMNKNDFGTMVFDYP 238
++ L++ G + ++S P++L + + + F D+ + + + +P
Sbjct: 124 LQSLQSRGASSSELTQIVSTVPKILGKRGHKSITVYYDFVKDIIEADKSSSYEKLCHSFP 183
Query: 239 KILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYYLGVS 298
+ G + + ++ L+E G++ + LL + CG ER++ +K + +G
Sbjct: 184 Q--G--NKKNKIRNISVLRELGVAQRLLFPLLISDGQPV-CG-KERFEESLKKVVEMGFD 237
Query: 299 RDGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYKKIR 358
+ + + ++ +++ + TI KV ++ +G + + K+PS L+YS KKI
Sbjct: 238 PETTKFVEALR-VIYRMS-DKTIEEKVNVYKRLGFGVADVWAIFKKWPSFLSYS-EKKIT 294
Query: 359 PVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKYFLSLGIKLHQLGAMIADF 418
L + G+ + ++ L P+ + CS K+ +++ FL LG + M+ +
Sbjct: 295 HTFETLKS-CGLLKHEVLLLLKKHPKCI-CSSEQKIVNSIETFLGLGFSRDEFAMMVKRY 352
Query: 419 PMLLRYNIDIFRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRHKIM 469
P + Y + + K ++ + M PL+ L+ P+ F YSLE+R +PR ++
Sbjct: 353 PQCIDYTAETVKKKTEFIVKNMNWPLEALVSIPQVFGYSLEKRTVPRCNVI 403
>TAIR|locus:2207265 [details] [associations]
symbol:AT1G79220 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC002986 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 IPI:IPI00545922
PIR:T01035 RefSeq:NP_565202.1 UniGene:At.34152
ProteinModelPortal:O64531 EnsemblPlants:AT1G79220.1 GeneID:844263
KEGG:ath:AT1G79220 TAIR:At1g79220 eggNOG:NOG329730
HOGENOM:HOG000114992 InParanoid:O64531 OMA:KVQRNMT PhylomeDB:O64531
ProtClustDB:CLSN2689322 Genevestigator:O64531 Uniprot:O64531
Length = 399
Score = 176 (67.0 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 50/238 (21%), Positives = 116/238 (48%)
Query: 248 EMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGI--GERWKPLVKYLYYLGVSRDGMRRM 305
++ K++ LK G+++ D+ ++L RP C + ER + Y + S++ +RR+
Sbjct: 114 QLEFKLSLLKPLGITSSDLVKILNCRPRFFSCRLVLDER----INYFMEILGSKEVLRRV 169
Query: 306 LVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYKKIRPVVIFLM 365
++ P + +DL+ I P + +++ +G + + ML+ P+L+ + + + I
Sbjct: 170 IIRNPSLMLYDLDDKIKPAIEYYKGLGFSQQDLVAMLISRPTLIPRTNFNNEKFEYI--- 226
Query: 366 TKAGVS-ERDIGKCLALGPELLGCSIGNKLEVNVKYFLSLGIKLHQLGAMIADFPMLLRY 424
K GV+ E + K +A+ ++G S +E V+ G ++ + P+LL
Sbjct: 227 EKTGVTRESKMFKYVAV---IIGVSRMETIEEKVRNLEKFGFSEEEIWHLYGKCPILLSL 283
Query: 425 NIDIFRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRHKIMVENRVNFKLRYML 482
+++ + ++ +M P +++ P +LE R+ PR + V+ + +L+ ++
Sbjct: 284 SVEKVQRNMTFVIASMKLPAHSVVKHPCLLLLNLESRLKPRADL-VKRVLEMRLKPLI 340
>TAIR|locus:2018042 [details] [associations]
symbol:AT1G62110 "AT1G62110" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR eggNOG:KOG1267
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
HOGENOM:HOG000113939 ProtClustDB:CLSN2682053 EMBL:BT005380
EMBL:AK117829 IPI:IPI00522637 RefSeq:NP_176402.2 UniGene:At.36313
ProteinModelPortal:Q8GY68 PaxDb:Q8GY68 PRIDE:Q8GY68
EnsemblPlants:AT1G62110.1 GeneID:842507 KEGG:ath:AT1G62110
TAIR:At1g62110 InParanoid:Q8GY68 OMA:QFIRISE PhylomeDB:Q8GY68
Genevestigator:Q8GY68 Uniprot:Q8GY68
Length = 462
Score = 161 (61.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 70/298 (23%), Positives = 134/298 (44%)
Query: 182 VEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVHFYLDMGMNKNDFGTMVFDYPKIL 241
+++LE+ G + ++S P++L ++E K+ +Y DF + + K
Sbjct: 124 LQFLESRGASSPELTQIVSTVPKILG--MKEGKSLGRYY--------DFVKEIIEADKSS 173
Query: 242 GFLTL-----EEMHQ-----KVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKY 291
+ TL E Q V+ L++ G+ + + LL + CG E ++ +K
Sbjct: 174 KYETLCQPLPEANRQGNKIRNVSVLRDLGVPQKLLFSLLISDAQPV-CG-KENFEESLKK 231
Query: 292 LYYLGVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTY 351
+ +G + + ++ V+ F + TI +V ++ G E + M K P L
Sbjct: 232 VVEMGFDPTTSKFVQALRA-VYRFT-DKTIEERVNVYKGFGFAVEDVWAMFKKCPYFLNS 289
Query: 352 SLYKKIRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKYFLSLGIKLHQL 411
S KKI + L K G+ E ++ L P+ +G S K+ +++ FL LG +
Sbjct: 290 S-EKKIGQTIETLK-KCGLLEDEVISVLKKYPQCIGTS-EQKILNSIEIFLGLGFSRDEF 346
Query: 412 GAMIADFPMLLRYNIDIFRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRHKIM 469
M+ FP L + + + K ++ + M PL+D++ P Y+LE+R +PR ++
Sbjct: 347 ITMVKRFPQCLILSAETVKKKIEFVVKKMNWPLKDVVSNPTVLGYNLEKRTVPRCNVI 404
>TAIR|locus:2199612 [details] [associations]
symbol:AT1G21150 "AT1G21150" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 EMBL:AC012190
IPI:IPI00537251 RefSeq:NP_173539.1 UniGene:At.66877
ProteinModelPortal:Q3ED83 PaxDb:Q3ED83 PRIDE:Q3ED83
EnsemblPlants:AT1G21150.1 GeneID:838711 KEGG:ath:AT1G21150
TAIR:At1g21150 eggNOG:NOG266402 HOGENOM:HOG000093133
InParanoid:Q3ED83 OMA:LIPCYDS PhylomeDB:Q3ED83
ProtClustDB:CLSN2912662 Genevestigator:Q3ED83 Uniprot:Q3ED83
Length = 390
Score = 154 (59.3 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 52/252 (20%), Positives = 108/252 (42%)
Query: 220 YLDMGMNKNDFGTMVFDYPKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGC 279
+ D G + +++ +P++L + + K+ + G ST D ++++ P ++
Sbjct: 95 FKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSY 154
Query: 280 GIGERWKPLVKYLYYLGVSRDGMRRMLVIKPMVFCFDLETT--IVPKVRFFQDIGVRDEG 337
+ +R P L + V + + + L K + CF L+ T + +V +++GV D+
Sbjct: 155 SLHKRLIPCYDSLKSILVEEESVVKCL--KRGIRCFSLKITHCVSLRVSICRELGVPDKS 212
Query: 338 IANMLVKFPSLLTYSLYKKIRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVN 397
I LV+ +S ++ V + + G + G A+ C+ + +E
Sbjct: 213 I-KWLVQASPFTFFSRERRFNEV-LNRVCSYGFDPKKAGFVHAM--VAFDCTSESAMERK 268
Query: 398 VKYFLSLGIKLHQLGAMIADFPMLLRYNIDIFRPKYRYLRRTMVRPLQDLIEFPRFFSYS 457
K F G A I FP + + + YL + +D++ P S S
Sbjct: 269 FKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLS 328
Query: 458 LEERIIPRHKIM 469
+E+RI PR++++
Sbjct: 329 MEKRIKPRNQVI 340
>TAIR|locus:2037338 [details] [associations]
symbol:AT1G74120 "AT1G74120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 EMBL:AC079678 IPI:IPI00521430 PIR:C96769
RefSeq:NP_565080.1 UniGene:At.66135 ProteinModelPortal:Q9C6A1
PRIDE:Q9C6A1 EnsemblPlants:AT1G74120.1 GeneID:843752
KEGG:ath:AT1G74120 TAIR:At1g74120 HOGENOM:HOG000006334
InParanoid:Q9C6A1 OMA:FRAGFEV PhylomeDB:Q9C6A1
ProtClustDB:CLSN2689192 ArrayExpress:Q9C6A1 Genevestigator:Q9C6A1
Uniprot:Q9C6A1
Length = 445
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 70/304 (23%), Positives = 132/304 (43%)
Query: 181 IVEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVHFYLDMGMNKNDFGTMVFDYPKI 240
+ L+ G + + +SR LL+ + E + + L + + + +++ D P +
Sbjct: 44 LANLLQRYGFPPSSLQHFLSRNNHLLNSDLVETEISLGILLSLKIPQKSLVSLISDCPNV 103
Query: 241 LGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIG-ERWKPLVKYLYYLGVSR 299
L L + ++ + G+ + + + H GIG +++ V+ L LG
Sbjct: 104 LRSEFLRKWRVPLSNCGKHGVVSSSA--IKSVLEHSSRIGIGPDKFNECVRVLKSLGFCD 161
Query: 300 DGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYKKIRP 359
+ R+L P V + E I K+ F IG+ + I FP +L +++P
Sbjct: 162 STVSRILSSFPGVLLVN-EIEIRRKIEFLVGIGIARDNIERFFHVFPEVLGIGTETRLKP 220
Query: 360 VVIFLMTKAGVSERDIGKCLALGPELLGCSIGNK---LE-VN-VKYFLSLGIKLHQLGAM 414
++ M K G S+ D+ K +A P +LG +G LE +N +K + + + GA
Sbjct: 221 LLDEFM-KMGFSKDDVKKEIAREPRVLGLELGELPRCLELINTLKCREVIRVSIISEGAF 279
Query: 415 IADFPMLLRYNIDIFRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRHKIMVENRV 474
A F + LR +D KY +RR + + + PR Y +E+ I + + NR+
Sbjct: 280 RAGFEVKLR--VDCLC-KYGLIRRDAFKVVW---KEPRVILYEIED--IEKKIEFLTNRM 331
Query: 475 NFKL 478
F +
Sbjct: 332 GFHI 335
Score = 132 (51.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 62/310 (20%), Positives = 129/310 (41%)
Query: 198 VMSRCPQLL-SQSIEEVKTRVHFYLDMGMNKNDFGTMVFDYPKILGFLTLEEMHQKVTYL 256
++S CP +L S+ + + + + G+ + V ++ +G + ++ ++ V L
Sbjct: 96 LISDCPNVLRSEFLRKWRVPLSNCGKHGVVSSSAIKSVLEHSSRIG-IGPDKFNECVRVL 154
Query: 257 KEFGLSTEDVGRLLAFRPHLMGCG-IGERWKPLVKYLYYLGVSRDGMRRMLVIKPMVFCF 315
K G V R+L+ P ++ I R K +++L +G++RD + R + P V
Sbjct: 155 KSLGFCDSTVSRILSSFPGVLLVNEIEIRRK--IEFLVGIGIARDNIERFFHVFPEVLGI 212
Query: 316 DLETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYKKIRPVVIFLMTKAGVSERDI 375
ET + P + F +G + + + + P +L L + R + + K R++
Sbjct: 213 GTETRLKPLLDEFMKMGFSKDDVKKEIAREPRVLGLELGELPRCLELINTLKC----REV 268
Query: 376 GKCLALGPELLGCSIGNKLEVNVKYFLSLGIKLHQLGAMIADFPMLLRYNIDIFRPKYRY 435
+ + KL V+ G+ ++ P ++ Y I+ K +
Sbjct: 269 IRVSIISEGAFRAGFEVKLRVDC--LCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEF 326
Query: 436 LRRTMVRPLQDLIEFPRFFSYSLEERIIPRHKIMVENRVNFKLRYMLACSNEEFNQKVAD 495
L M + L + P + +L+++I+PR+ ++ KL+ L C + K
Sbjct: 327 LTNRMGFHINCLADVPEYLGVNLQKQIVPRYNVIDY----LKLKGGLGC---DIGLKGLI 379
Query: 496 KVEGRRLYEL 505
K +R Y L
Sbjct: 380 KPSMKRFYNL 389
Score = 124 (48.7 bits), Expect = 0.00017, P = 0.00017
Identities = 51/231 (22%), Positives = 102/231 (44%)
Query: 176 EELNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVHFYLDMGMNKNDFGTMVF 235
++ NE V L++ G + ++S P +L + E++ ++ F + +G+ +++
Sbjct: 145 DKFNECVRVLKSLGFCDSTVSRILSSFPGVLLVNEIEIRRKIEFLVGIGIARDNIERFFH 204
Query: 236 DYPKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYYL 295
+P++LG T + + + G S +DV + +A P ++G +GE P L
Sbjct: 205 VFPEVLGIGTETRLKPLLDEFMKMGFSKDDVKKEIAREPRVLGLELGEL--PRCLELINT 262
Query: 296 GVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYK 355
R+ +R + +I F E + +V G+ ++ K P ++ Y + +
Sbjct: 263 LKCREVIR-VSIISEGAFRAGFEVKL--RVDCLCKYGLIRRDAFKVVWKEPRVILYEI-E 318
Query: 356 KIRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKL--EVNVKYFLSL 404
I + FL + G CLA PE LG ++ ++ NV +L L
Sbjct: 319 DIEKKIEFLTNRMGFHIN----CLADVPEYLGVNLQKQIVPRYNVIDYLKL 365
>TAIR|locus:2036858 [details] [associations]
symbol:AT1G61970 "AT1G61970" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:KOG1267 EMBL:AC004392 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 HOGENOM:HOG000113939
ProtClustDB:CLSN2682053 EMBL:AY139992 EMBL:BT008499 IPI:IPI00541464
PIR:T02141 RefSeq:NP_001185290.1 RefSeq:NP_176388.1
UniGene:At.36340 UniGene:At.68140 ProteinModelPortal:O80702
SMR:O80702 PaxDb:O80702 PRIDE:O80702 EnsemblPlants:AT1G61970.1
EnsemblPlants:AT1G61970.2 GeneID:842492 KEGG:ath:AT1G61970
TAIR:At1g61970 InParanoid:O80702 OMA:ATKCVAT PhylomeDB:O80702
ArrayExpress:O80702 Genevestigator:O80702 Uniprot:O80702
Length = 418
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 79/354 (22%), Positives = 144/354 (40%)
Query: 174 SIEELNE---IVEYLETNGVRRDWMGYVMSRCPQLLSQSIEE-VKTRVHFYLDMGMNKND 229
S E+ N ++ L ++G + ++ PQLL E+ + ++ F G + ++
Sbjct: 77 SFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSE 136
Query: 230 FGTMVFDYPKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLV 289
+V P+ILG + + ++K+ L L H + G E V
Sbjct: 137 ITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKSSKNEKLC---HSLPQGNLENKIRNV 193
Query: 290 KYLYYLGVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIG-VRDEGIANMLVKFPSL 348
L LG+ + +L+ C K +F + + V + G KF
Sbjct: 194 SVLRELGMPHKLLFSLLISDSQPVC--------GKEKFEETLKKVVEMGFDPTTSKFVEA 245
Query: 349 LT--YSLYKKIRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKYFLSLGI 406
L Y + +K + L G D+ P L S L+ +++ FL LG
Sbjct: 246 LQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLD-SIETFLGLGF 304
Query: 407 KLHQLGAMIADFPMLLRYNIDIFRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRH 466
+ M+ FP + + + + K +L + M PL+ ++ P F YSLE+RI+PR
Sbjct: 305 SRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRG 364
Query: 467 KI--------MVENRVNFKLRYMLACSNEEF-NQKVADKVEGRRLYELGLINEA 511
+ ++ N + + +L C+ + F N+ VA+ V+ + + EL I A
Sbjct: 365 NVIKALMSKGLMRNELP-SISCVLMCTKQVFLNRYVANHVDKQLVTELMAIYRA 417
>TAIR|locus:2177734 [details] [associations]
symbol:AT5G64950 "AT5G64950" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 EMBL:AB019236 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 IPI:IPI00545204
RefSeq:NP_201300.1 UniGene:At.28929 ProteinModelPortal:Q9LV83
EnsemblPlants:AT5G64950.1 GeneID:836619 KEGG:ath:AT5G64950
TAIR:At5g64950 InParanoid:Q9LV83 OMA:MSEFLIT PhylomeDB:Q9LV83
ProtClustDB:CLSN2686446 Genevestigator:Q9LV83 Uniprot:Q9LV83
Length = 391
Score = 147 (56.8 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 55/292 (18%), Positives = 134/292 (45%)
Query: 182 VEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVHFYLDMGMNKNDFGTMVFDYPKIL 241
VE+L NG ++ + R P L +S+E+ ++ + + + +P+++
Sbjct: 42 VEFLRDNGFQKPLAIAIAMRYPNL--KSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMM 99
Query: 242 GFLTLEE-MHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYYLGVSRD 300
F +E+ + K+ + K+ G + +G+ ++ ++G + ++ P V+ L + +
Sbjct: 100 -FYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKH 158
Query: 301 GMRRMLVIKP--MVFCFDLETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYKKIR 358
+++ + ++ D ++P + + + G+ +A++L + P + S +K+R
Sbjct: 159 EDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLS-EEKLR 217
Query: 359 PVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNK-LEVNVKYFLSLGIKLHQLGAMIAD 417
V + G + + + + + S+ K + VK F++ G ++ +I
Sbjct: 218 GYVSRALD-LGFT---LNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRR 273
Query: 418 FPMLLRYNIDIFRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRHKIM 469
P L+R + D + + + M + L + P SY+LE+R+IPR K++
Sbjct: 274 SPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVL 325
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 55/233 (23%), Positives = 107/233 (45%)
Query: 113 PLIRWLKHNGLSYPKIAKLICMSGG--NLESIRHL---AEWLKSVHV-KGEFLGVALLKT 166
P +R+ K G + + K + + + ++ L E LKS+ K E L V L +
Sbjct: 109 PKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRC 168
Query: 167 GGNILERSIEE-LNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVHFYLDMGM 225
G +L R L + YLET G+ + ++ R P++ + S E+++ V LD+G
Sbjct: 169 GWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGF 228
Query: 226 NKNDFGTMVFDYPKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERW 285
N M+ L L+ + +KV G S +++ ++ P L+ C +
Sbjct: 229 TLNS--RMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLT 286
Query: 286 KPLVKYLYYLGVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGI 338
YL +G+ R+ + + +P V ++LE ++P+++ Q + R++G+
Sbjct: 287 LGFEFYLKRMGLEREALAK----RPCVLSYNLEKRVIPRLKVLQIL--REKGL 333
>TAIR|locus:2172798 [details] [associations]
symbol:AT5G23930 "AT5G23930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB005244
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
HOGENOM:HOG000113939 ProtClustDB:CLSN2682053 IPI:IPI00546759
RefSeq:NP_197781.1 UniGene:At.65544 ProteinModelPortal:Q9FF87
PaxDb:Q9FF87 PRIDE:Q9FF87 ProMEX:Q9FF87 EnsemblPlants:AT5G23930.1
GeneID:832458 KEGG:ath:AT5G23930 TAIR:At5g23930 eggNOG:NOG273152
InParanoid:Q9FF87 OMA:MKANFDE PhylomeDB:Q9FF87
Genevestigator:Q9FF87 Uniprot:Q9FF87
Length = 457
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 68/303 (22%), Positives = 136/303 (44%)
Query: 170 ILERSIEELNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVHFYLDMGMNKND 229
++E + L + +L+ NG + ++S+ P++L + + + + Y+ + D
Sbjct: 115 LIENPEKTLRAKLHFLKLNGASSSELTEIVSKVPKILGKRGGKWISHYYDYVKEILQDQD 174
Query: 230 FGTMVFDYPKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLV 289
+ + ++ V+ L++ G+ + LL R + CG ER++ V
Sbjct: 175 SSSSSSKRKQT-------NRNRNVSVLRKLGVPQRLLLNLLISRAKPV-CG-KERFEESV 225
Query: 290 KYLYYLGVSRDGMRRMLVIKPMVFCFDL-ETTIVPKVRFFQDIGVRDEGIANMLVKFPSL 348
K + +G D V VF ++L + TI KV + +G+ + + K+P
Sbjct: 226 KKIVEMGF--DPKSPKFVNALYVF-YELSDKTIEEKVNAYIRLGLSVNEVWAVFKKWPFS 282
Query: 349 LTYSLYKKIRPVVIFLMTKAGVSERDIGKCLALG--PELLGCSIGNKLEVNVKYFLSLGI 406
L YS I+ + + G+++ ++ CL + PE +G S K+ +VK FL LG
Sbjct: 283 LKYSEKNIIQKFET--LKRVGLTKEEV--CLVVKKYPECVGTS-EEKIVKSVKTFLELGF 337
Query: 407 KLHQLGAMIADFPMLLRYNIDIFRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRH 466
++ +I P + D + K +L +TM PL+ + P +SLE+ ++PR
Sbjct: 338 TKDEVLMIIKRHPQCIGLAADSVKKKTEFLVKTMGWPLKVVASTPIVLGFSLEKFVLPRC 397
Query: 467 KIM 469
++
Sbjct: 398 NVI 400
>TAIR|locus:2036878 [details] [associations]
symbol:AT1G61990 "AT1G61990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
EMBL:AC004392 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 HOGENOM:HOG000113939 ProtClustDB:CLSN2682053
EMBL:AF462848 EMBL:BT000861 IPI:IPI00547257 PIR:T02143
RefSeq:NP_176390.1 UniGene:At.28258 UniGene:At.74237
UniGene:At.74283 ProteinModelPortal:O80704 SMR:O80704 PaxDb:O80704
PRIDE:O80704 EnsemblPlants:AT1G61990.1 GeneID:842494
KEGG:ath:AT1G61990 TAIR:At1g61990 eggNOG:NOG240230
InParanoid:O80704 OMA:QMSEKTI PhylomeDB:O80704
Genevestigator:O80704 Uniprot:O80704
Length = 414
Score = 125 (49.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 31/121 (25%), Positives = 58/121 (47%)
Query: 349 LTYSLYKKIRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKYFLSLGIKL 408
+ Y + +K + + G + D+ + P +L S K+ + + FL LG
Sbjct: 241 MLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVS-KKKILKSAETFLDLGYSR 299
Query: 409 HQLGAMIADFPMLLRYNIDIFRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRHKI 468
+ M+ +P + Y+++ + K +L + M P L+ P+ F YS+E+RIIPR I
Sbjct: 300 AEFLMMVKRYPPCIEYSVESVKKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNI 359
Query: 469 M 469
+
Sbjct: 360 L 360
Score = 62 (26.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 12/55 (21%), Positives = 29/55 (52%)
Query: 224 GMNKNDFGTMVFDYPKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMG 278
G + T++ DYP +L + + +K+ L+ G S+ ++ +++ P ++G
Sbjct: 95 GFTDSQISTIITDYPLLLVADAKKALGRKLQILQSRGASSSEITEIVSTVPRILG 149
>UNIPROTKB|Q49AM1 [details] [associations]
symbol:MTERFD3 "mTERF domain-containing protein 3,
mitochondrial" species:9606 "Homo sapiens" [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=ISS] [GO:0005759 "mitochondrial
matrix" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=ISS] GO:GO:0006355 GO:GO:0005759
GO:GO:0006351 GO:GO:0044212 GO:GO:0042645 InterPro:IPR003690
Pfam:PF02536 SMART:SM00733 EMBL:AY008301 EMBL:AK024124
EMBL:AK222558 EMBL:AL832827 EMBL:AC007541 EMBL:BC025984
EMBL:BC036066 IPI:IPI00018781 RefSeq:NP_001028222.1
RefSeq:NP_079474.2 UniGene:Hs.5009 ProteinModelPortal:Q49AM1
SMR:Q49AM1 PhosphoSite:Q49AM1 DMDM:118595440 PaxDb:Q49AM1
PeptideAtlas:Q49AM1 PRIDE:Q49AM1 DNASU:80298
Ensembl:ENST00000240050 Ensembl:ENST00000392830
Ensembl:ENST00000552029 GeneID:80298 KEGG:hsa:80298 UCSC:uc001tme.1
CTD:80298 GeneCards:GC12M107371 HGNC:HGNC:30779 HPA:HPA003526
neXtProt:NX_Q49AM1 PharmGKB:PA142671311 eggNOG:NOG285349
HOGENOM:HOG000113677 HOVERGEN:HBG081991 InParanoid:Q49AM1 KO:K15031
OMA:QYRIRKL OrthoDB:EOG46Q6SZ PhylomeDB:Q49AM1 GenomeRNAi:80298
NextBio:70754 ArrayExpress:Q49AM1 Bgee:Q49AM1 CleanEx:HS_MTERFD3
Genevestigator:Q49AM1 GermOnline:ENSG00000120832 Uniprot:Q49AM1
Length = 385
Score = 138 (53.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 65/276 (23%), Positives = 119/276 (43%)
Query: 178 LNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVHFYLDMGMNKNDFGTMVFDY 237
+ EI L+ G + ++ RCP+ + S V T+ + + N+ + ++ +
Sbjct: 77 VEEIANILQELGADETAVASILERCPEAIVCSPTAVNTQRKLWQLVCKNEEELIKLIEQF 136
Query: 238 PKILGFLTLEEM-HQK--VTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLY- 293
P+ F T+++ +QK V + +E GL + RLL P++ + E+ K +V+ L
Sbjct: 137 PE--SFFTIKDQENQKLNVQFFQELGLKNVVISRLLTAAPNVFHNPV-EKNKQMVRILQE 193
Query: 294 -YLGV--SRDGMR----RMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIANMLVKFP 346
YL V S M+ ++L P + + T I + F Q+ G I +L K
Sbjct: 194 SYLDVGGSEANMKVWLLKLLSQNPFIL-LNSPTAIKETLEFLQEQGFTSFEILQLLSKLK 252
Query: 347 SLLTYSLYKKIRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKYFLSLGI 406
L + I+ + F ++ D+ + + P LL S+ LE ++ L GI
Sbjct: 253 GFLFQLCPRSIQNSISFSKNAFKCTDHDLKQLVLKCPALLYYSVP-VLEERMQGLLREGI 311
Query: 407 KLHQLGAMIADFPMLLRYNIDIFRPKYRYLRRTMVR 442
+ A I + PM+L I + + R L + R
Sbjct: 312 SI----AQIRETPMVLELTPQIVQYRIRKLNSSGYR 343
>UNIPROTKB|F1SPQ4 [details] [associations]
symbol:MTERFD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005759 "mitochondrial matrix"
evidence=IEA] GO:GO:0006355 GO:GO:0005759 GO:GO:0006351
GO:GO:0044212 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
CTD:80298 KO:K15031 OMA:QYRIRKL GeneTree:ENSGT00530000063817
EMBL:CU463085 RefSeq:XP_003355417.1 Ensembl:ENSSSCT00000000174
GeneID:100152022 KEGG:ssc:100152022 Uniprot:F1SPQ4
Length = 385
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 60/269 (22%), Positives = 119/269 (44%)
Query: 172 ERSIEELNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVHFYLDMGMNKNDFG 231
E +EE+ +I++ L G + + ++ RCP+ + S + T+ + + NK +
Sbjct: 74 ETYVEEIADILQQL---GANQTAVASILERCPEAIICSPTAINTQRELWQLVCKNKEELV 130
Query: 232 TMVFDYPKILGFLTLEEM-HQK--VTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPL 288
++ +P+ F T+++ +QK V + +E GL + R L ++ + E+ K +
Sbjct: 131 KLIEQFPE--SFFTVKDQENQKLNVQFFQELGLKNVVISRFLTTASNIFHNPL-EKNKQM 187
Query: 289 VKYLY--YL--GVSRDGMR----RMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIAN 340
+K L YL G S M+ ++L P + I + F Q+ G + I
Sbjct: 188 IKILQESYLNLGGSEANMKVWLLKLLSQNPFIL-LKSSAAIKETLEFLQEQGFTNFEILQ 246
Query: 341 MLVKFPSLLTYSLYKKIRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKY 400
+L K L + I+ + F ++ D+ + + P LL S+ LE ++
Sbjct: 247 LLSKLKGFLFQLCPRSIQNSMSFTENAFKCTDHDLKQLVLKCPALLYYSVA-VLEERIQG 305
Query: 401 FLSLGIKLHQLGA--MIADF-PMLLRYNI 426
L GI + Q+ M+ + P +++Y I
Sbjct: 306 LLKEGISITQIRETPMVLELTPQIVQYRI 334
>GENEDB_PFALCIPARUM|PF07_0113 [details] [associations]
symbol:PF07_0113 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] EMBL:AL844506 InterPro:IPR003690
Pfam:PF02536 SMART:SM00733 RefSeq:XP_001349172.1
ProteinModelPortal:Q8IBI2 EnsemblProtists:PF07_0113:mRNA
GeneID:2655166 KEGG:pfa:PF07_0113 EuPathDB:PlasmoDB:PF3D7_0727500
HOGENOM:HOG000283859 ProtClustDB:CLSZ2500653 Uniprot:Q8IBI2
Length = 707
Score = 134 (52.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 51/193 (26%), Positives = 88/193 (45%)
Query: 315 FDLE-TTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYKKIRPVVIFLMTKAGVSER 373
FD++ TI+ K ++ G+ E I ++ P L + I+ + + + G +
Sbjct: 471 FDMDGNTIIKKTNVLEN-GINIEMIKKIIYTSPRLSLINKNTIIKRLKHY-KNELGYDYK 528
Query: 374 DIGKCLALGPELLGCSIGN-KLEVNVKYFLSLGIKLHQLGAMIADFPMLLRYNI-DIFRP 431
++ L P+ + GN K + ++ IK L +I +P + YNI RP
Sbjct: 529 ELQHILYNIPQFF--AFGNLKKKYKELLYIHETIKEKDLQKLIKMYPRIFTYNIYRTIRP 586
Query: 432 KYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRH----KIMVENRVNFK----LRYMLA 483
K YL + + D + FP++FSYS RIIPRH I ++ + + +Y A
Sbjct: 587 KLLYLILHLNKHFHDTLLFPQYFSYSFRLRIIPRHIAYMNIYYDDYIKYYNDLVKKYNYA 646
Query: 484 CSNEEFNQKVADK 496
N+ FN+ V +K
Sbjct: 647 DFNKYFNELVYNK 659
>UNIPROTKB|Q8IBI2 [details] [associations]
symbol:PF07_0113 "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] EMBL:AL844506 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 RefSeq:XP_001349172.1 ProteinModelPortal:Q8IBI2
EnsemblProtists:PF07_0113:mRNA GeneID:2655166 KEGG:pfa:PF07_0113
EuPathDB:PlasmoDB:PF3D7_0727500 HOGENOM:HOG000283859
ProtClustDB:CLSZ2500653 Uniprot:Q8IBI2
Length = 707
Score = 134 (52.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 51/193 (26%), Positives = 88/193 (45%)
Query: 315 FDLE-TTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYKKIRPVVIFLMTKAGVSER 373
FD++ TI+ K ++ G+ E I ++ P L + I+ + + + G +
Sbjct: 471 FDMDGNTIIKKTNVLEN-GINIEMIKKIIYTSPRLSLINKNTIIKRLKHY-KNELGYDYK 528
Query: 374 DIGKCLALGPELLGCSIGN-KLEVNVKYFLSLGIKLHQLGAMIADFPMLLRYNI-DIFRP 431
++ L P+ + GN K + ++ IK L +I +P + YNI RP
Sbjct: 529 ELQHILYNIPQFF--AFGNLKKKYKELLYIHETIKEKDLQKLIKMYPRIFTYNIYRTIRP 586
Query: 432 KYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRH----KIMVENRVNFK----LRYMLA 483
K YL + + D + FP++FSYS RIIPRH I ++ + + +Y A
Sbjct: 587 KLLYLILHLNKHFHDTLLFPQYFSYSFRLRIIPRHIAYMNIYYDDYIKYYNDLVKKYNYA 646
Query: 484 CSNEEFNQKVADK 496
N+ FN+ V +K
Sbjct: 647 DFNKYFNELVYNK 659
>TAIR|locus:2133920 [details] [associations]
symbol:AT4G19650 "AT4G19650" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 IPI:IPI00537653 RefSeq:NP_193700.2 UniGene:At.54414
ProteinModelPortal:F4JTX3 PRIDE:F4JTX3 EnsemblPlants:AT4G19650.1
GeneID:827709 KEGG:ath:AT4G19650 OMA:NPINEFE ArrayExpress:F4JTX3
Uniprot:F4JTX3
Length = 575
Score = 97 (39.2 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 39/187 (20%), Positives = 83/187 (44%)
Query: 218 HFYLDMGMNKNDFGTMVFDYPKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLM 277
H + G+ + G M + +I + + + K+ + GLS V +L+ P L+
Sbjct: 166 HALCNYGIPRGKIGRMYKEAREIFRYES-GMLAMKLRGYENLGLSKATVIKLVTSCPLLL 224
Query: 278 GCGIGERWKPLVKYLYYLGVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEG 337
GI + +V L L V D + R L + + + I+ + F +G ++E
Sbjct: 225 VGGIDAEFSSVVDKLKGLQVGCDWLGRYLSDRK-TYSW---RRILETIEFLDKVGCKEEK 280
Query: 338 IANMLVKFPSLLTYSLYKKIRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVN 397
++++L +P+L+ KK V+ + KAG+ +I + PE+L ++
Sbjct: 281 LSSLLKTYPALVIEGSGKKFY-VLFGRLFKAGLQVNEIYRLFIDNPEMLSDKCVKNIQKT 339
Query: 398 VKYFLSL 404
+ + +++
Sbjct: 340 LDFLIAI 346
Score = 97 (39.2 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 50/226 (22%), Positives = 104/226 (46%)
Query: 105 FIEDSNVVPL-IRWLKHNGLSYPKIAKLI--C---MSGGNLESIRHLAEWLKSVHVKGEF 158
F +S ++ + +R ++ GLS + KL+ C + GG + + LK + V ++
Sbjct: 189 FRYESGMLAMKLRGYENLGLSKATVIKLVTSCPLLLVGGIDAEFSSVVDKLKGLQVGCDW 248
Query: 159 LGVALLKTGGNILERSIEELNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVH 218
LG L + S + E +E+L+ G + + + ++ P L+ + + K V
Sbjct: 249 LGRYL----SDRKTYSWRRILETIEFLDKVGCKEEKLSSLLKTYPALVIEGSGK-KFYVL 303
Query: 219 F--YLDMGMNKNDFGTMVFDYPKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHL 276
F G+ N+ + D P++L ++ + + + +L + T+ + ++L L
Sbjct: 304 FGRLFKAGLQVNEIYRLFIDNPEMLSDKCVKNIQKTLDFLIAIRMETQFITKILLSHMEL 363
Query: 277 MG-CGIGERWKPLVKYLYYLGVSRDGMRRMLVIKPM-VFCFDLETT 320
+G C + P L L V +D + ++L +P+ +FCF + TT
Sbjct: 364 IGSCSLPA---PRTACLS-LNVKQDELCKILKKEPLRLFCF-VSTT 404
Score = 82 (33.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 22/95 (23%), Positives = 44/95 (46%)
Query: 391 GNKLEVNVKYFLSLGIKLHQLGAMIADFPMLLRYNIDIFRPKYRYLRRTMVRPLQDLIEF 450
G++L+ + G+ + + +I PM+L + D+ K L + P++ L+ F
Sbjct: 449 GDQLQERFDCLVKAGLNYNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRF 508
Query: 451 PRFFSYSLEERIIPRHKIMVENRVNFKLRYMLACS 485
P + Y ++ RI R + + R + ML+ S
Sbjct: 509 PAYLCYDMQ-RIHHRFSMYLWLRERDAAKPMLSPS 542
>TAIR|locus:2018057 [details] [associations]
symbol:AT1G62120 "AT1G62120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR eggNOG:KOG1267
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
HOGENOM:HOG000113939 ProtClustDB:CLSN2682053 EMBL:BT015077
EMBL:BT015902 IPI:IPI00545469 RefSeq:NP_176403.1 UniGene:At.49506
ProteinModelPortal:Q6DBE5 PRIDE:Q6DBE5 EnsemblPlants:AT1G62120.1
GeneID:842508 KEGG:ath:AT1G62120 TAIR:At1g62120 InParanoid:Q6DBE5
OMA:MYVRKHD PhylomeDB:Q6DBE5 Genevestigator:Q6DBE5 Uniprot:Q6DBE5
Length = 437
Score = 130 (50.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 64/293 (21%), Positives = 124/293 (42%)
Query: 179 NEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIEE-VKTRVHFYLDMGMNKNDFGTMVFDY 237
+ ++ L ++G + ++ P+LL E+ + ++ F +G + ++ V
Sbjct: 89 DSVLSLLRSHGFTDSQISNIIRTFPRLLILDAEKSLAPKLQFLQSIGASSSELTETVSAV 148
Query: 238 PKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPL-VKYLYYLG 296
PKILG + + + ++K + D L H + G + K + L +G
Sbjct: 149 PKILGKRKGKSLSRYYDFVKV--IIEADKSSKLEKLCHSLPEGSKQENKIRNLLVLREMG 206
Query: 297 VSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYKK 356
V + + +L+ C + ++ +IG D A VK ++L Y L K
Sbjct: 207 VPQRLLFSLLISDAGDVCG--KEKFKESLKKAVEIGF-DPTTATF-VKALNVL-YGLSDK 261
Query: 357 IRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKYFLSLGIKLHQLGAMIA 416
+ G++ D+ P +L S K+E +V+ FL LG + M+
Sbjct: 262 GIENKFNACKRLGLAVDDVWAMFKKWPNILTKS-EKKIENSVETFLGLGFSRDEFLMMVK 320
Query: 417 DFPMLLRYNIDIFRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRHKIM 469
FP + Y+ ++ + K +L M PL+ + P+ YSLE+R +PR ++
Sbjct: 321 RFPQCIGYSTELMKTKTEFLVTEMNWPLKAVASIPQVLGYSLEKRTVPRCNVI 373
>UNIPROTKB|F1MI83 [details] [associations]
symbol:MTERFD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005759 "mitochondrial matrix"
evidence=IEA] GO:GO:0006355 GO:GO:0005759 GO:GO:0006351
GO:GO:0044212 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
CTD:80298 KO:K15031 OMA:QYRIRKL GeneTree:ENSGT00530000063817
EMBL:DAAA02013749 IPI:IPI00717856 RefSeq:NP_001178103.1
UniGene:Bt.24320 Ensembl:ENSBTAT00000013386 GeneID:782988
KEGG:bta:782988 NextBio:20925817 Uniprot:F1MI83
Length = 385
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 62/276 (22%), Positives = 116/276 (42%)
Query: 172 ERSIEELNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVHFYLDMGMNKNDFG 231
E +EE+ I++ L G + ++ RCP+ + S V T+ + + N+
Sbjct: 74 ETYVEEIANILQQL---GASETAVASILERCPEAIICSPTAVNTQRELWQLVCKNEEKLV 130
Query: 232 TMVFDYPKILGFLTLEEMHQK---VTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPL 288
++ +P+ F T+++ + + + +E GL + R L ++ I E+ K +
Sbjct: 131 KLIEQFPE--SFFTVKDQENRKLNIQFFQELGLKNVVISRFLTTASNIFHNPI-EKNKQV 187
Query: 289 VKYLY--YL--GVSRDGMR----RMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIAN 340
+K L YL G S M+ ++L P + + I + FFQ G + I
Sbjct: 188 IKILQESYLNLGGSEANMKVWLLKLLSQNPFIL-LNSSAAIKETLEFFQKQGFTNFEILQ 246
Query: 341 MLVKFPSLLTYSLYKKIRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKY 400
+L K L + I+ + F ++ D+ + + P LL S+ LE ++
Sbjct: 247 LLSKLKGFLFQLCPRSIQNSMSFSKNAFKSTDHDLKQLVLKCPALLYYSVP-VLEERIQG 305
Query: 401 FLSLGIKLHQLGAMIADFPMLLRYNIDIFRPKYRYL 436
L GI + A I + PM+L I + + R L
Sbjct: 306 LLKEGISI----AQIRETPMVLELTPQIVQYRIRKL 337
>UNIPROTKB|Q5R6G1 [details] [associations]
symbol:MTERFD3 "mTERF domain-containing protein 3,
mitochondrial" species:9601 "Pongo abelii" [GO:0005759
"mitochondrial matrix" evidence=ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISS]
GO:GO:0006355 GO:GO:0005759 GO:GO:0006351 GO:GO:0044212
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 CTD:80298
HOVERGEN:HBG081991 KO:K15031 OMA:QYRIRKL OrthoDB:EOG46Q6SZ
GeneTree:ENSGT00530000063817 EMBL:CR860529 RefSeq:NP_001126554.1
UniGene:Pab.18727 Ensembl:ENSPPYT00000005818 GeneID:100173545
KEGG:pon:100173545 InParanoid:Q5R6G1 Uniprot:Q5R6G1
Length = 385
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 62/270 (22%), Positives = 115/270 (42%)
Query: 178 LNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVHFYLDMGMNKNDFGTMVFDY 237
+ EI L+ G + ++ RCP+ + V T+ + + N+ + ++ +
Sbjct: 77 VEEIANILQELGADETAVANILERCPEAIVCRPTAVNTQRKLWQLVCKNEEELIKLIEQF 136
Query: 238 PKILGFLTLEEM-HQK--VTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLY- 293
P+ F T+++ +QK V + +E GL + RLL ++ + E+ K +V+ L
Sbjct: 137 PE--SFFTIKDQENQKLNVQFFQELGLKNVVISRLLTAASNVFHNPV-EKNKQMVRILQE 193
Query: 294 -YLGV--SRDGMR----RMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIANMLVKFP 346
YL V S M+ ++L P + + T I + F Q+ G I +L K
Sbjct: 194 SYLNVGGSEANMKVWLLKLLSQNPFIL-LNSPTAIKETLEFLQEQGFTSFEILQLLSKLK 252
Query: 347 SLLTYSLYKKIRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKYFLSLGI 406
L + I+ + F ++ D+ + + P LL S+ LE ++ L GI
Sbjct: 253 GFLFQLCPRSIQNSISFSKNAFKCTDHDLKQLVLKCPALLYYSVP-VLEERMQGLLREGI 311
Query: 407 KLHQLGAMIADFPMLLRYNIDIFRPKYRYL 436
+ A I + PM+L I + + R L
Sbjct: 312 SI----AQIRETPMVLELTPQIVQYRIRKL 337
>TAIR|locus:2036868 [details] [associations]
symbol:AT1G61980 "AT1G61980" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IDA] [GO:0009409 "response to cold"
evidence=IEP] [GO:0005739 "mitochondrion" evidence=IDA]
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005634
GO:GO:0009409 EMBL:AC004392 KO:K15032 InterPro:IPR003690
Pfam:PF02536 SMART:SM00733 UniGene:At.23835 HOGENOM:HOG000113939
ProtClustDB:CLSN2682053 EMBL:BT029746 IPI:IPI00542184 PIR:T02142
RefSeq:NP_176389.1 UniGene:At.36338 ProteinModelPortal:O80703
PaxDb:O80703 PRIDE:O80703 EnsemblPlants:AT1G61980.1 GeneID:842493
KEGG:ath:AT1G61980 TAIR:At1g61980 eggNOG:NOG251984
InParanoid:O80703 OMA:LIGSELP PhylomeDB:O80703
Genevestigator:O80703 Uniprot:O80703
Length = 418
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 63/296 (21%), Positives = 118/296 (39%)
Query: 179 NEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIEE-VKTRVHFYLDMGMNKNDFGTMVFDY 237
+ ++ L ++G + +++ PQLL E+ + ++ F G + ++ +V
Sbjct: 85 DSVLNLLRSHGFTDSQISTIVTDYPQLLVADAEKSLAPKLQFLQSRGASSSELTEIVSTV 144
Query: 238 PKILGFLTLEEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYYLGV 297
PKILG + + ++KE L + +P G L + L V
Sbjct: 145 PKILGKRGHKTISVFYDFIKETLLDKSSKSEK-SCQPFPQG--------NLENKIRNLSV 195
Query: 298 SRD-GMRRMLVIKPMVFCFDLETTIVPKVRFFQDIG-VRDEGIANMLVKFPSLL--TYSL 353
R+ GM L+ ++ C + + K +F + + V + G KF L L
Sbjct: 196 LRELGMPHKLLFPLLISC---DVPVFGKEKFEESLKKVVEMGFDPSTSKFVEALCVVQRL 252
Query: 354 YKKIRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKYFLSLGIKLHQLGA 413
K + + G + P L S K+ ++ FL LG +
Sbjct: 253 SDKNIEDKVNAYKRLGFDVEYVWTVFKRWPNFLTHS-EKKILNTIETFLGLGFSRDEFSV 311
Query: 414 MIADFPMLLRYNIDIFRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRHKIM 469
+I FP + + ++ + K +L + M PL+ L+ P YSLE+R +PR ++
Sbjct: 312 LIKRFPQGIGLSAEMVKKKTEFLVKKMNWPLKALVSNPAVLGYSLEKRTVPRGNVV 367
>UNIPROTKB|G3V130 [details] [associations]
symbol:MTERFD1 "mTERF domain-containing protein 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] GO:GO:0005739
EMBL:CH471060 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
EMBL:AP003465 UniGene:Hs.308613 HGNC:HGNC:24258
ProteinModelPortal:G3V130 SMR:G3V130 Ensembl:ENST00000522822
ArrayExpress:G3V130 Bgee:G3V130 Uniprot:G3V130
Length = 296
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 56/228 (24%), Positives = 105/228 (46%)
Query: 159 LGVALLKT-----GGNILER-SIE-ELNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIE 211
LGV L K N+L R E ++ +++ +L+ G+ + +G +++ + S+ +E
Sbjct: 41 LGVDLSKIEKHPEAANLLLRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFSEDLE 100
Query: 212 EVKTRVHFYLDMGMNKNDFGTMVFDYPKILGFLTLEEMHQKVTYL-KEFGLSTEDVGRLL 270
+KTRV + +K D MV P +L F ++E + ++ + KE LS + L+
Sbjct: 101 NLKTRVAYLHSKNFSKADVAQMVRKAPFLLNF-SVERLDNRLGFFQKELELSVKKTRDLV 159
Query: 271 AFRPHLMGCGIGERWKPLVK-YLYYLGVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQ 329
P L+ G E K +K Y LG + ++ M+ P + + + + F
Sbjct: 160 VRLPRLL-TGSLEPVKENMKVYRLELGFKHNEIQHMITRIPKMLTAN-KMKLTETFDFVH 217
Query: 330 DIGVRDEGIANMLVKFPSLLTYSLYKKIRPVVIFLMTKAGVSERDIGK 377
++ I +VKFP + L+K ++ +FL T G ++ D K
Sbjct: 218 NVMSIPHHI---IVKFPQVFNTRLFK-VKERHLFL-TYLGRAQYDPAK 260
>UNIPROTKB|E2RMX2 [details] [associations]
symbol:MTERFD3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] GO:GO:0006355 GO:GO:0005759
GO:GO:0006351 GO:GO:0044212 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 CTD:80298 KO:K15031 OMA:QYRIRKL
GeneTree:ENSGT00530000063817 EMBL:AAEX03007373
RefSeq:XP_003431558.1 Ensembl:ENSCAFT00000002828 GeneID:100685274
KEGG:cfa:100685274 Uniprot:E2RMX2
Length = 385
Score = 121 (47.7 bits), Expect = 0.00029, P = 0.00029
Identities = 58/270 (21%), Positives = 114/270 (42%)
Query: 178 LNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIEEVKTRVHFYLDMGMNKNDFGTMVFDY 237
+ E+ + L+ G + ++ RCP+ + S V T+ + + N+ + ++ +
Sbjct: 77 VEEVADVLQQLGADEATVASILERCPEAIVCSPTTVNTQREVWQLVCKNEQELVKLIEQF 136
Query: 238 PKILGFLTLEEMH-QK--VTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLY- 293
P+ F T+++ QK + + +E GL +GR L ++ I E+ + ++ L
Sbjct: 137 PE--SFFTIKDQETQKLNIQFFQELGLKNVVIGRFLTTASNIFHNPI-EKNRQMISILQE 193
Query: 294 -YL--GVSRDGMR----RMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIANMLVKFP 346
YL G S M+ ++L P + + I + F Q+ G + I +L K
Sbjct: 194 SYLNLGGSEANMKVWLLKLLSQNPFIL-LNSSAAIKKTLEFLQEQGFTNFEILQLLSKLK 252
Query: 347 SLLTYSLYKKIRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKYFLSLGI 406
L I+ + F ++ D+ + + P +L S+ LE ++ L GI
Sbjct: 253 GFLFQLCPGNIQNSISFSKNAFKCTDHDLKQLVLKCPAILYYSVP-VLEERIQGLLKEGI 311
Query: 407 KLHQLGAMIADFPMLLRYNIDIFRPKYRYL 436
+ A I + PM+L I + + R L
Sbjct: 312 SI----AQIKETPMVLELTPQIVQYRIRKL 337
>TAIR|locus:2018062 [details] [associations]
symbol:AT1G62150 "AT1G62150" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND]
EMBL:CP002684 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 HOGENOM:HOG000113939 ProtClustDB:CLSN2682053
EMBL:BT005682 EMBL:AK118965 IPI:IPI00535716 RefSeq:NP_176406.1
UniGene:At.10248 ProteinModelPortal:Q8GWB0 PRIDE:Q8GWB0
EnsemblPlants:AT1G62150.1 GeneID:842511 KEGG:ath:AT1G62150
TAIR:At1g62150 InParanoid:Q8GWB0 OMA:YSENRII PhylomeDB:Q8GWB0
ArrayExpress:Q8GWB0 Genevestigator:Q8GWB0 Uniprot:Q8GWB0
Length = 463
Score = 128 (50.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 56/273 (20%), Positives = 122/273 (44%)
Query: 247 EEMHQKVTYLKEFGLSTEDVGRLLAFRPHLMGCGIGERWKPLVKYLYYLGVSRDGMRRML 306
E + V L++ G+ + LL F H + CG E+++ + + +G+ D
Sbjct: 195 ENKIRNVLVLRDLGVPQRLLFSLL-FSNHHVCCG-KEKFEESLNKV--VGMGFDPTTPKF 250
Query: 307 VIKPMVFCFDL-ETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYKKIRPVVIFLM 365
V + + + L + + ++ G+ + + K P+ L YS + I+ +
Sbjct: 251 V-EALCIVYGLSDKRLEENFNVYKRFGLTVNDVWELFKKCPAFLGYSENRIIQ--TFEAL 307
Query: 366 TKAGVSERDIGKCLALGPELLGCSIGNKLEVNVKYFLSLGIKLHQLGAMIADFPMLLRYN 425
+ G+ E ++ P L S L +++ F+ LG + M+ P + Y+
Sbjct: 308 KRCGLCEDEVLSVFKKNPLCLRASEQQILN-SMETFIGLGFSRDEFVMMVKCLPQCIGYS 366
Query: 426 IDIFRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIPRHKI----MVENRVNFKLRYM 481
++ + K ++ + M PL+ + FP+ YS+E+R +PR + M + + +L M
Sbjct: 367 AEMVKKKTEFVVKKMNWPLKVITLFPQVLGYSMEKRTVPRCNVIKALMSKGLLGSELPPM 426
Query: 482 ---LACSNEEFNQKVADKVEGRRLYEL-GLINE 510
LAC+++ F ++ + + + + EL + N+
Sbjct: 427 ASVLACTDQTFLKRYVVEHDEKLVLELMSIFNQ 459
Score = 37 (18.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 198 VMSRCPQLLSQSIEE-VKTRVHFYLDMGMNKNDFGTMVFDYPKILG 242
++S P LL E + ++ G + ++ +V PKILG
Sbjct: 110 IISDYPTLLVADAENSLGPKLLLMQSRGASSSELTEIVSKVPKILG 155
>UNIPROTKB|Q96E29 [details] [associations]
symbol:MTERFD1 "mTERF domain-containing protein 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
GO:GO:0005739 GO:GO:0045892 GO:GO:0006351 GO:GO:0044212 CTD:51001
eggNOG:NOG246142 HOGENOM:HOG000044443 HOVERGEN:HBG062577 KO:K15032
OrthoDB:EOG4CRM08 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
EMBL:AF132946 EMBL:AP003465 EMBL:BC012995 IPI:IPI00101163
IPI:IPI00798150 RefSeq:NP_057026.3 UniGene:Hs.308613 PDB:3M66
PDB:3OPG PDBsum:3M66 PDBsum:3OPG ProteinModelPortal:Q96E29
SMR:Q96E29 STRING:Q96E29 DMDM:74731522 PaxDb:Q96E29 PRIDE:Q96E29
DNASU:51001 Ensembl:ENST00000287025 GeneID:51001 KEGG:hsa:51001
UCSC:uc003yhr.1 GeneCards:GC08M097321 HGNC:HGNC:24258 HPA:HPA002966
neXtProt:NX_Q96E29 PharmGKB:PA142671309 InParanoid:Q96E29
OMA:TRVAYLQ PhylomeDB:Q96E29 EvolutionaryTrace:Q96E29
GenomeRNAi:51001 NextBio:53456 ArrayExpress:Q96E29 Bgee:Q96E29
CleanEx:HS_MTERFD1 Genevestigator:Q96E29 GermOnline:ENSG00000156469
Uniprot:Q96E29
Length = 417
Score = 120 (47.3 bits), Expect = 0.00042, P = 0.00042
Identities = 56/228 (24%), Positives = 105/228 (46%)
Query: 159 LGVALLKT-----GGNILER-SIE-ELNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIE 211
LGV L K N+L R E ++ +++ +L+ G+ + +G +++ + S+ +E
Sbjct: 162 LGVDLSKIEKHPEAANLLLRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFSEDLE 221
Query: 212 EVKTRVHFYLDMGMNKNDFGTMVFDYPKILGFLTLEEMHQKVTYL-KEFGLSTEDVGRLL 270
+KTRV + +K D MV P +L F ++E + ++ + KE LS + L+
Sbjct: 222 NLKTRVAYLHSKNFSKADVAQMVRKAPFLLNF-SVERLDNRLGFFQKELELSVKKTRDLV 280
Query: 271 AFRPHLMGCGIGERWKPLVK-YLYYLGVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQ 329
P L+ G E K +K Y LG + ++ M+ P + + + + F
Sbjct: 281 VRLPRLL-TGSLEPVKENMKVYRLELGFKHNEIQHMITRIPKMLTAN-KMKLTETFDFVH 338
Query: 330 DIGVRDEGIANMLVKFPSLLTYSLYKKIRPVVIFLMTKAGVSERDIGK 377
++ I +VKFP + L+K ++ +FL T G ++ D K
Sbjct: 339 NVMSIPHHI---IVKFPQVFNTRLFK-VKERHLFL-TYLGRAQYDPAK 381
>TAIR|locus:2103291 [details] [associations]
symbol:SHOT1 "AT3G60400" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IDA] GO:GO:0005739 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL138646 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
IPI:IPI00545820 PIR:T47851 RefSeq:NP_191599.1 UniGene:At.34455
ProteinModelPortal:Q9M219 SMR:Q9M219 PRIDE:Q9M219
EnsemblPlants:AT3G60400.1 GeneID:825211 KEGG:ath:AT3G60400
TAIR:At3g60400 eggNOG:NOG285291 HOGENOM:HOG000242270
InParanoid:Q9M219 OMA:ESIGIDY PhylomeDB:Q9M219
ProtClustDB:CLSN2685047 Genevestigator:Q9M219 Uniprot:Q9M219
Length = 558
Score = 86 (35.3 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 391 GNKLEVNVKY--FLSLGIKLHQLGAMIADFPMLLRYNIDIFRPKYRYLRRTMVRPLQDLI 448
G +E++ ++ L+ GI ++ +I P +L + K R+L M L L
Sbjct: 423 GTAVELHDRFQILLNSGIIFSKICMLIRSAPKILNQKPHSIQDKLRFLCGEMGDSLDYLE 482
Query: 449 EFPRFFSYSLEERIIPR---HKIMVE---NRVNFKLRYMLACSNEEF 489
FP + + LE RI PR HK +VE + ++ + ++A S + F
Sbjct: 483 VFPAYLCFDLENRISPRFRFHKWLVEKGFSEKSYSIASIVATSEKAF 529
Score = 82 (33.9 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 189 GVRRDWMGYVMSRCPQL-LSQSIEEVKTRVHFYLDMGMNKNDFGTMVFDYPKILGFLTLE 247
G + M +M R L L S E + + ++ G++K D ++ P I+ F LE
Sbjct: 242 GCENEEMWELMCRNKSLFLEYSEEALMNKAGYFCRFGVSKEDAALLILRNPAIMNF-DLE 300
Query: 248 EMHQKVT-YLKEFGLSTEDVGRLLAFRPHLMG 278
+ VT LK FGL ++V + P++ G
Sbjct: 301 KPVISVTGMLKHFGLRQDEVDAVAQKYPYVFG 332
>UNIPROTKB|F1RY61 [details] [associations]
symbol:MTERFD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] GO:GO:0005739 GO:GO:0044212 CTD:51001 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 OMA:TRVAYLQ
GeneTree:ENSGT00390000005801 EMBL:CU463146 RefSeq:XP_001929306.1
UniGene:Ssc.10844 Ensembl:ENSSSCT00000006681 GeneID:100152384
KEGG:ssc:100152384 Uniprot:F1RY61
Length = 414
Score = 119 (46.9 bits), Expect = 0.00054, P = 0.00054
Identities = 45/182 (24%), Positives = 83/182 (45%)
Query: 286 KPLVKYLYYLGVSRDGMRRMLVIKPMVFCFDLETTIVPKVRFFQDIGVRDEGIANMLVKF 345
K ++ +L LG+ + + L +F DLE + +V + Q IA M+
Sbjct: 186 KQILLFLKDLGMEDNQLGTFLTKNYAIFSEDLEN-LKTRVAYLQSKNFSKADIAQMVRNA 244
Query: 346 PSLLTYSLYKKIRPVVIFLMTKAGVSERDIGKCLALGPELLGCSIGNKLEVNVK-YFLSL 404
P LL++S+ +++ + F + +S + + P LL S+ ++ N+K Y L L
Sbjct: 245 PFLLSFSV-ERLDNRLGFFQKELELSVKKTRDLIIRLPRLLTGSL-EPVKENMKVYRLEL 302
Query: 405 GIKLHQLGAMIADFPMLLRYNIDIFRPKYRYLRRTMVRPLQDLIEFPRFFSYSLEERIIP 464
G K +++ M+ P +L N + Y+ M P ++ FP+ F+ L +I
Sbjct: 303 GFKHNEIQHMVTKIPKMLTANKRKLTETFDYVHNVMRIPHHVIVRFPQVFNTRLF-KIKE 361
Query: 465 RH 466
RH
Sbjct: 362 RH 363
>MGI|MGI:1913660 [details] [associations]
symbol:Mterfd1 "MTERF domain containing 1" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IMP] MGI:MGI:1913660 GO:GO:0005739 GO:GO:0045892
GO:GO:0006351 GO:GO:0044212 CTD:51001 eggNOG:NOG246142
HOGENOM:HOG000044443 HOVERGEN:HBG062577 KO:K15032 OrthoDB:EOG4CRM08
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 OMA:TRVAYLQ
EMBL:AK010525 EMBL:AK011934 EMBL:BC025173 EMBL:BC085282
IPI:IPI00109282 RefSeq:NP_079823.2 UniGene:Mm.347939
ProteinModelPortal:Q8R3J4 SMR:Q8R3J4 STRING:Q8R3J4 PRIDE:Q8R3J4
DNASU:66410 Ensembl:ENSMUST00000021991 GeneID:66410 KEGG:mmu:66410
UCSC:uc007qzw.2 GeneTree:ENSGT00390000005801 InParanoid:Q8R3J4
NextBio:321609 Bgee:Q8R3J4 CleanEx:MM_MTERFD1 Genevestigator:Q8R3J4
GermOnline:ENSMUSG00000021519 Uniprot:Q8R3J4
Length = 412
Score = 117 (46.2 bits), Expect = 0.00089, P = 0.00089
Identities = 55/217 (25%), Positives = 102/217 (47%)
Query: 159 LGVALLKT-----GGNILER-SIEE-LNEIVEYLETNGVRRDWMGYVMSRCPQLLSQSIE 211
LGV L K N+L R E+ + +I+ +L+ G+ + +G +++ + S+ +E
Sbjct: 157 LGVDLSKIEKHPDAANLLLRLDFEKHIKQILLFLKDLGLEDNQLGPFLTKNYAIFSEDLE 216
Query: 212 EVKTRVHFYLDMGMNKNDFGTMVFDYPKILGFLTLEEMHQKVTYL-KEFGLSTEDVGRLL 270
+KTRV + +K D MV + P +L F ++E + ++ + KE L+ + L+
Sbjct: 217 NLKTRVAYLQSKNFSKTDIARMVKNAPFLLSF-SVERLDNRLGFFQKELELNVKKTRDLV 275
Query: 271 AFRPHLMGCGIGERWKPLVK-YLYYLGVSRDGMRRMLVIKPMVFCFDLE--TTIVPKVRF 327
P L+ G E K +K Y LG + ++ M++ P + + T I V
Sbjct: 276 VRLPRLL-TGSLEPVKENMKVYHLELGFKHNEIQHMVIKIPKMLTANKRKLTEIFDYVHN 334
Query: 328 FQDIGVRDEGIANMLVKFPSLLTYSLYKKIRPVVIFL 364
+I +++VKFP L ++K I+ +FL
Sbjct: 335 VMNIP------HHIIVKFPQLFNTRVFK-IKERHLFL 364
>UNIPROTKB|E2RL82 [details] [associations]
symbol:MTERFD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] GO:GO:0005739
GO:GO:0044212 CTD:51001 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 OMA:TRVAYLQ GeneTree:ENSGT00390000005801
EMBL:AAEX03015990 RefSeq:XP_003433727.1 Ensembl:ENSCAFT00000015040
GeneID:100684270 KEGG:cfa:100684270 Uniprot:E2RL82
Length = 417
Score = 117 (46.2 bits), Expect = 0.00091, P = 0.00091
Identities = 51/237 (21%), Positives = 108/237 (45%)
Query: 142 IRHLAEWLKSVHVKGEFLGVALLKTGGNILER-SIE-ELNEIVEYLETNGVRRDWMGYVM 199
+ H K VH+ + + N+L R E ++ +I+ +L+ G+ + +G +
Sbjct: 150 VDHSETLQKLVHLGVDLSKIEKHPEAANLLLRLDFEKDIKQILMFLKDLGIEDNQLGPYL 209
Query: 200 SRCPQLLSQSIEEVKTRVHFYLDMGMNKNDFGTMVFDYPKILGFLTLEEMHQKVTYL-KE 258
++ + S+ +E +KTRV + +K MV + P +L F ++E + ++ + KE
Sbjct: 210 TKNYAIFSEDLENLKTRVAYLQSKNFSKAQIAQMVRNAPFLLSF-SVERLDNRLGFFQKE 268
Query: 259 FGLSTEDVGRLLAFRPHLMGCGIGERWKPLVK-YLYYLGVSRDGMRRMLVIKPMVFCFDL 317
LS + L+ P L+ G E K +K Y LG + ++ M+ P + +
Sbjct: 269 LELSVKKTRDLVVRLPRLL-TGSLEPVKENMKVYRLELGFKHNEIQHMITRVPKMLTAN- 326
Query: 318 ETTIVPKVRFFQDIGVRDEGIANMLVKFPSLLTYSLYKKIRPVVIFLMTKAGVSERD 374
+ + + ++ +++V+FP + L+K ++ +FL T G ++ D
Sbjct: 327 KRKLTETFDYVHNVMNIPH---HLIVRFPQVFNTRLFK-VKERHLFL-TYLGRAQYD 378
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.140 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 556 556 0.00098 119 3 11 22 0.50 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 39
No. of states in DFA: 619 (66 KB)
Total size of DFA: 305 KB (2157 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 49.34u 0.14s 49.48t Elapsed: 00:00:02
Total cpu time: 49.36u 0.14s 49.50t Elapsed: 00:00:02
Start: Fri May 10 17:23:22 2013 End: Fri May 10 17:23:24 2013