BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008730
(556 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1WAO|1 Chain 1, Pp5 Structure
pdb|1WAO|2 Chain 2, Pp5 Structure
pdb|1WAO|3 Chain 3, Pp5 Structure
pdb|1WAO|4 Chain 4, Pp5 Structure
Length = 477
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 193/327 (59%), Positives = 250/327 (76%)
Query: 228 LEVEPQYSGARIEGDVITLDFVKKMMDDFKNQKCLHKRYAFQIVLQTREMLRALPSLVDI 287
+ +E +YSG ++E +T+ F+K++M +K+QK LH++ A+QI++Q +E+L L +LV+
Sbjct: 148 MTIEDEYSGPKLEDGKVTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSKLSTLVET 207
Query: 288 DIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSVEVILTLFAF 347
+ + + TVCGD HGQFYDLLNIFELNGLPSE NPY+FNGDFVDRGSFSVEVILTLF F
Sbjct: 208 TLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGF 267
Query: 348 KCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKLSETFVELFAEVFCCLPLAHVLNQKVF 407
K + P +L RGNHE+ +MN+IYGFEGEV++K + ELF+EVF LPLA +N KV
Sbjct: 268 KLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVL 327
Query: 408 VVHGGLFSVDGVKLSDIKTIDRFCEPPEEGLMCELLWSDPQPLPGRGPSKRGVGLSFGAD 467
++HGGLFS DGV L DI+ I+R +PP+ G MC+LLWSDPQP GR SKRGV FG D
Sbjct: 328 IMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPD 387
Query: 468 VTKRFLQDNSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTL 527
VTK FL++N+LD ++RSHEVK EGYE+ H G+ +TVFSAPNYCDQMGNK ++I + L
Sbjct: 388 VTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDL 447
Query: 528 KPNIVTFAAVPHPDVKPMAYANNFLRM 554
+P F AVPHP+VKPMAYAN L++
Sbjct: 448 RPQFHQFTAVPHPNVKPMAYANTLLQL 474
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
Query: 10 SVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQ 69
++ RAEELK AN+ F+AK Y AI YSQAIELN NA+YY NR+ A+ + E YG A+
Sbjct: 2 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALG 61
Query: 70 DASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAV 129
DA++AIE+D +Y KGYYRR A+ +A+GKF+ AL+D++ V K+ P+D DA K +EC K V
Sbjct: 62 DATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIV 121
Query: 130 KKLKFEEAIAVPESERHSVADSIDYQSIGMSPSSS 164
K+ FE AIA E +R SV DS+D +S+ + S
Sbjct: 122 KQKAFERAIAGDEHKR-SVVDSLDIESMTIEDEYS 155
>pdb|1S95|A Chain A, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5
pdb|1S95|B Chain B, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5
Length = 333
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 193/327 (59%), Positives = 250/327 (76%)
Query: 228 LEVEPQYSGARIEGDVITLDFVKKMMDDFKNQKCLHKRYAFQIVLQTREMLRALPSLVDI 287
+ +E +YSG ++E +T+ F+K++M +K+QK LH++ A+QI++Q +E+L L +LV+
Sbjct: 4 MTIEDEYSGPKLEDGKVTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSKLSTLVET 63
Query: 288 DIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSVEVILTLFAF 347
+ + + TVCGD HGQFYDLLNIFELNGLPSE NPY+FNGDFVDRGSFSVEVILTLF F
Sbjct: 64 TLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGF 123
Query: 348 KCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKLSETFVELFAEVFCCLPLAHVLNQKVF 407
K + P +L RGNHE+ +MN+IYGFEGEV++K + ELF+EVF LPLA +N KV
Sbjct: 124 KLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVL 183
Query: 408 VVHGGLFSVDGVKLSDIKTIDRFCEPPEEGLMCELLWSDPQPLPGRGPSKRGVGLSFGAD 467
++HGGLFS DGV L DI+ I+R +PP+ G MC+LLWSDPQP GR SKRGV FG D
Sbjct: 184 IMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPD 243
Query: 468 VTKRFLQDNSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTL 527
VTK FL++N+LD ++RSHEVK EGYE+ H G+ +TVFSAPNYCDQMGNK ++I + L
Sbjct: 244 VTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDL 303
Query: 528 KPNIVTFAAVPHPDVKPMAYANNFLRM 554
+P F AVPHP+VKPMAYAN L++
Sbjct: 304 RPQFHQFTAVPHPNVKPMAYANTLLQL 330
>pdb|3H60|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Mn2+ Atoms
pdb|3H60|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Mn2+ Atoms
pdb|3H61|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Norcantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H61|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Norcantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H62|C Chain C, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H62|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H63|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H63|C Chain C, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H64|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Endothall
pdb|3H64|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Endothall
pdb|3H66|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms
pdb|3H66|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms
pdb|3H67|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H67|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H68|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H68|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H69|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms Complexed With Endothall
pdb|3H69|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms Complexed With Endothall
Length = 315
Score = 414 bits (1064), Expect = e-116, Method: Compositional matrix adjust.
Identities = 190/315 (60%), Positives = 242/315 (76%)
Query: 234 YSGARIEGDVITLDFVKKMMDDFKNQKCLHKRYAFQIVLQTREMLRALPSLVDIDIPDGK 293
YSG ++E +T+ F+K++M +K+QK LH++ A+QI++Q +E+L L +LV+ + + +
Sbjct: 1 YSGPKLEDGKVTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETE 60
Query: 294 HFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSVEVILTLFAFKCMCPS 353
TVCGD HGQFYDLLNIFELNGLPSE NPY+FNGDFVDRGSFSVEVILTLF FK + P
Sbjct: 61 KITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPD 120
Query: 354 AIYLSRGNHESKSMNKIYGFEGEVRSKLSETFVELFAEVFCCLPLAHVLNQKVFVVHGGL 413
+L RGNHE+ +MN+IYGFEGEV++K + ELF+EVF LPLA +N KV ++HGGL
Sbjct: 121 HFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGL 180
Query: 414 FSVDGVKLSDIKTIDRFCEPPEEGLMCELLWSDPQPLPGRGPSKRGVGLSFGADVTKRFL 473
FS DGV L DI+ I+R +PP+ G MC+LLWSDPQP GR SKRGV FG DVTK FL
Sbjct: 181 FSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFL 240
Query: 474 QDNSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNIVT 533
++N+LD ++RSHEVK EGYE+ H G+ +TVFSAPNYCDQMGNK ++I + L+P
Sbjct: 241 EENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQ 300
Query: 534 FAAVPHPDVKPMAYA 548
F AVPHP+VKPMAYA
Sbjct: 301 FTAVPHPNVKPMAYA 315
>pdb|3ICF|A Chain A, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM
SACCHAROMYCES Cerevisiae With Similarity To Human
Phosphatase Pp5
pdb|3ICF|B Chain B, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM
SACCHAROMYCES Cerevisiae With Similarity To Human
Phosphatase Pp5
Length = 335
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 152/330 (46%), Positives = 200/330 (60%), Gaps = 17/330 (5%)
Query: 234 YSGARIEGDVITLDFVKKMMDD-FKNQKCLHKRYAFQIVLQTREMLRALPSLVDID---I 289
+ GA+I+ + +F+ K ++D F K L K+Y I+ + R PS V+++
Sbjct: 4 FKGAKIKN--XSQEFISKXVNDLFLKGKYLPKKYVAAIISHADTLFRQEPSXVELENNST 61
Query: 290 PDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSVEVILTLFAFKC 349
PD K +VCGD HGQFYD+LN+F G ++ YLFNGDFVDRGS+S EV L + K
Sbjct: 62 PDVK-ISVCGDTHGQFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKI 120
Query: 350 MCPSAIYLSRGNHESKSMNKIYGFEGEVRSKLSETFVELFAEVFCCLPLAHVLNQKVFVV 409
+ P+ +L+RGNHES + NKIYGFE E + K S+ FA+ F LPLA ++N V
Sbjct: 121 LHPNNFFLNRGNHESDNXNKIYGFEDECKYKYSQRIFNXFAQSFESLPLATLINNDYLVX 180
Query: 410 HGGLFSVDGVKLSDIKTIDRFCEPPEEGLMCELLWSDPQPLPGRGPSKRGVGLSFGADVT 469
HGGL S LSD K IDRF +PP +G ELLW+DPQ G GPS+RG+G +FG D+T
Sbjct: 181 HGGLPSDPSATLSDFKNIDRFAQPPRDGAFXELLWADPQEANGXGPSQRGLGHAFGPDIT 240
Query: 470 KRFLQDNSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRF------- 522
RFL++N L + RSHE++ G + E GKL TVFSAPNYCD GN G I
Sbjct: 241 DRFLRNNKLRKIFRSHELRXGGVQFEQKGKLXTVFSAPNYCDSQGNLGGVIHVVPGHGIL 300
Query: 523 -EAPTLKPNIV--TFAAVPHPDVKPMAYAN 549
N++ TF AV HPD+KP AY+N
Sbjct: 301 QAGRNDDQNLIIETFEAVEHPDIKPXAYSN 330
>pdb|2O8A|A Chain A, Rat Pp1cgamma Complexed With Mouse Inhibitor-2
pdb|2O8A|B Chain B, Rat Pp1cgamma Complexed With Mouse Inhibitor-2
pdb|2O8G|A Chain A, Rat Pp1c Gamma Complexed With Mouse Inhibitor-2
pdb|2O8G|B Chain B, Rat Pp1c Gamma Complexed With Mouse Inhibitor-2
Length = 329
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/252 (43%), Positives = 164/252 (65%), Gaps = 7/252 (2%)
Query: 270 IVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGD 329
+ L++RE+ + P L++++ P +CGD+HGQ+YDLL +FE G P E N YLF GD
Sbjct: 44 LCLKSREIFLSQPILLELEAP----LKICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGD 98
Query: 330 FVDRGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKLSETFVELF 389
+VDRG S+E I L A+K P +L RGNHE S+N+IYGF E + + + + F
Sbjct: 99 YVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTF 158
Query: 390 AEVFCCLPLAHVLNQKVFVVHGGLFSVDGVKLSDIKTIDRFCEPPEEGLMCELLWSDP-Q 448
+ F CLP+A ++++K+F HGGL S D + I+ I R + P++GL+C+LLWSDP +
Sbjct: 159 TDCFNCLPIAAIVDEKIFCCHGGL-SPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 217
Query: 449 PLPGRGPSKRGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPN 508
+ G G + RGV +FGA+V +FL + LDL+ R+H+V ++GYE +L+T+FSAPN
Sbjct: 218 DVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 277
Query: 509 YCDQMGNKGAFI 520
YC + N GA +
Sbjct: 278 YCGEFDNAGAMM 289
>pdb|1JK7|A Chain A, Crystal Structure Of The Tumor-Promoter Okadaic Acid Bound
To Protein Phosphatase-1
pdb|1IT6|A Chain A, Crystal Structure Of The Complex Between Calyculin A And
The Catalytic Subunit Of Protein Phosphatase 1
pdb|1IT6|B Chain B, Crystal Structure Of The Complex Between Calyculin A And
The Catalytic Subunit Of Protein Phosphatase 1
pdb|2BCD|A Chain A, X-Ray Crystal Structure Of Protein Phosphatase-1 With The
Marine Toxin Motuporin Bound
pdb|2BDX|A Chain A, X-Ray Crystal Structure Of Dihydromicrocystin-La Bound To
Protein Phosphatase-1
Length = 323
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/252 (43%), Positives = 164/252 (65%), Gaps = 7/252 (2%)
Query: 270 IVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGD 329
+ L++RE+ + P L++++ P +CGD+HGQ+YDLL +FE G P E N YLF GD
Sbjct: 38 LCLKSREIFLSQPILLELEAP----LKICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGD 92
Query: 330 FVDRGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKLSETFVELF 389
+VDRG S+E I L A+K P +L RGNHE S+N+IYGF E + + + + F
Sbjct: 93 YVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTF 152
Query: 390 AEVFCCLPLAHVLNQKVFVVHGGLFSVDGVKLSDIKTIDRFCEPPEEGLMCELLWSDP-Q 448
+ F CLP+A ++++K+F HGGL S D + I+ I R + P++GL+C+LLWSDP +
Sbjct: 153 TDCFNCLPIAAIVDEKIFCCHGGL-SPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 211
Query: 449 PLPGRGPSKRGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPN 508
+ G G + RGV +FGA+V +FL + LDL+ R+H+V ++GYE +L+T+FSAPN
Sbjct: 212 DVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 271
Query: 509 YCDQMGNKGAFI 520
YC + N GA +
Sbjct: 272 YCGEFDNAGAMM 283
>pdb|1FJM|A Chain A, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type
1) Complexed With Microcystin-Lr Toxin
pdb|1FJM|B Chain B, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type
1) Complexed With Microcystin-Lr Toxin
Length = 330
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/252 (43%), Positives = 164/252 (65%), Gaps = 7/252 (2%)
Query: 270 IVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGD 329
+ L++RE+ + P L++++ P +CGD+HGQ+YDLL +FE G P E N YLF GD
Sbjct: 38 LCLKSREIFLSQPILLELEAP----LKICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGD 92
Query: 330 FVDRGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKLSETFVELF 389
+VDRG S+E I L A+K P +L RGNHE S+N+IYGF E + + + + F
Sbjct: 93 YVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTF 152
Query: 390 AEVFCCLPLAHVLNQKVFVVHGGLFSVDGVKLSDIKTIDRFCEPPEEGLMCELLWSDP-Q 448
+ F CLP+A ++++K+F HGGL S D + I+ I R + P++GL+C+LLWSDP +
Sbjct: 153 TDCFNCLPIAAIVDEKIFCCHGGL-SPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 211
Query: 449 PLPGRGPSKRGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPN 508
+ G G + RGV +FGA+V +FL + LDL+ R+H+V ++GYE +L+T+FSAPN
Sbjct: 212 DVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 271
Query: 509 YCDQMGNKGAFI 520
YC + N GA +
Sbjct: 272 YCGEFDNAGAMM 283
>pdb|4G9J|A Chain A, Protein SerTHR PHOSPHATASE-1 In Complex With
Cell-Permeable Peptide
pdb|4G9J|B Chain B, Protein SerTHR PHOSPHATASE-1 In Complex With
Cell-Permeable Peptide
Length = 331
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/252 (43%), Positives = 164/252 (65%), Gaps = 7/252 (2%)
Query: 270 IVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGD 329
+ L++RE+ + P L++++ P +CGD+HGQ+YDLL +FE G P E N YLF GD
Sbjct: 39 LCLKSREIFLSQPILLELEAP----LKICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGD 93
Query: 330 FVDRGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKLSETFVELF 389
+VDRG S+E I L A+K P +L RGNHE S+N+IYGF E + + + + F
Sbjct: 94 YVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTF 153
Query: 390 AEVFCCLPLAHVLNQKVFVVHGGLFSVDGVKLSDIKTIDRFCEPPEEGLMCELLWSDP-Q 448
+ F CLP+A ++++K+F HGGL S D + I+ I R + P++GL+C+LLWSDP +
Sbjct: 154 TDCFNCLPIAAIVDEKIFCCHGGL-SPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 212
Query: 449 PLPGRGPSKRGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPN 508
+ G G + RGV +FGA+V +FL + LDL+ R+H+V ++GYE +L+T+FSAPN
Sbjct: 213 DVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 272
Query: 509 YCDQMGNKGAFI 520
YC + N GA +
Sbjct: 273 YCGEFDNAGAMM 284
>pdb|3N5U|A Chain A, Crystal Structure Of An Rb C-Terminal Peptide Bound To The
Catalytic Subunit Of Pp1
pdb|3N5U|B Chain B, Crystal Structure Of An Rb C-Terminal Peptide Bound To The
Catalytic Subunit Of Pp1
Length = 300
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 110/252 (43%), Positives = 164/252 (65%), Gaps = 7/252 (2%)
Query: 270 IVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGD 329
+ L++RE+ + P L++++ P +CGD+HGQ+YDLL +FE G P E N YLF GD
Sbjct: 38 LCLKSREIFLSQPILLELEAP----LKICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGD 92
Query: 330 FVDRGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKLSETFVELF 389
+VDRG S+E I L A+K P +L RGNHE S+N+IYGF E + + + + F
Sbjct: 93 YVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTF 152
Query: 390 AEVFCCLPLAHVLNQKVFVVHGGLFSVDGVKLSDIKTIDRFCEPPEEGLMCELLWSDP-Q 448
+ F CLP+A ++++K+F HGGL S D + I+ I R + P++GL+C+LLWSDP +
Sbjct: 153 TDCFNCLPIAAIVDEKIFCCHGGL-SPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 211
Query: 449 PLPGRGPSKRGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPN 508
+ G G + RGV +FGA+V +FL + LDL+ R+H+V ++GYE +L+T+FSAPN
Sbjct: 212 DVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 271
Query: 509 YCDQMGNKGAFI 520
YC + N GA +
Sbjct: 272 YCGEFDNAGAMM 283
>pdb|3EGG|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Spinophilin
pdb|3EGG|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Spinophilin
pdb|3EGH|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1), The Pp1 Binding And Pdz Domains Of
Spinophilin And The Small Natural Molecular Toxin
Nodularin-R
pdb|3EGH|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1), The Pp1 Binding And Pdz Domains Of
Spinophilin And The Small Natural Molecular Toxin
Nodularin-R
pdb|3HVQ|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Neurabin
pdb|3HVQ|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Neurabin
Length = 329
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 110/252 (43%), Positives = 164/252 (65%), Gaps = 7/252 (2%)
Query: 270 IVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGD 329
+ L++RE+ + P L++++ P +CGD+HGQ+YDLL +FE G P E N YLF GD
Sbjct: 37 LCLKSREIFLSQPILLELEAP----LKICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGD 91
Query: 330 FVDRGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKLSETFVELF 389
+VDRG S+E I L A+K P +L RGNHE S+N+IYGF E + + + + F
Sbjct: 92 YVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTF 151
Query: 390 AEVFCCLPLAHVLNQKVFVVHGGLFSVDGVKLSDIKTIDRFCEPPEEGLMCELLWSDP-Q 448
+ F CLP+A ++++K+F HGGL S D + I+ I R + P++GL+C+LLWSDP +
Sbjct: 152 TDCFNCLPIAAIVDEKIFCCHGGL-SPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 210
Query: 449 PLPGRGPSKRGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPN 508
+ G G + RGV +FGA+V +FL + LDL+ R+H+V ++GYE +L+T+FSAPN
Sbjct: 211 DVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 270
Query: 509 YCDQMGNKGAFI 520
YC + N GA +
Sbjct: 271 YCGEFDNAGAMM 282
>pdb|3V4Y|A Chain A, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|C Chain C, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|E Chain E, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|G Chain G, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
Length = 306
Score = 225 bits (573), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 110/252 (43%), Positives = 164/252 (65%), Gaps = 7/252 (2%)
Query: 270 IVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGD 329
+ L++RE+ + P L++++ P +CGD+HGQ+YDLL +FE G P E N YLF GD
Sbjct: 37 LCLKSREIFLSQPILLELEAP----LKICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGD 91
Query: 330 FVDRGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKLSETFVELF 389
+VDRG S+E I L A+K P +L RGNHE S+N+IYGF E + + + + F
Sbjct: 92 YVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTF 151
Query: 390 AEVFCCLPLAHVLNQKVFVVHGGLFSVDGVKLSDIKTIDRFCEPPEEGLMCELLWSDP-Q 448
+ F CLP+A ++++K+F HGGL S D + I+ I R + P++GL+C+LLWSDP +
Sbjct: 152 TDCFNCLPIAAIVDEKIFCCHGGL-SPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 210
Query: 449 PLPGRGPSKRGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPN 508
+ G G + RGV +FGA+V +FL + LDL+ R+H+V ++GYE +L+T+FSAPN
Sbjct: 211 DVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 270
Query: 509 YCDQMGNKGAFI 520
YC + N GA +
Sbjct: 271 YCGEFDNAGAMM 282
>pdb|3E7A|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Nodularin-R
pdb|3E7A|B Chain B, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Nodularin-R
pdb|3E7B|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Inhibitor Tautomycin
pdb|3E7B|B Chain B, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Inhibitor Tautomycin
Length = 299
Score = 225 bits (573), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 110/252 (43%), Positives = 164/252 (65%), Gaps = 7/252 (2%)
Query: 270 IVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGD 329
+ L++RE+ + P L++++ P +CGD+HGQ+YDLL +FE G P E N YLF GD
Sbjct: 37 LCLKSREIFLSQPILLELEAP----LKICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGD 91
Query: 330 FVDRGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKLSETFVELF 389
+VDRG S+E I L A+K P +L RGNHE S+N+IYGF E + + + + F
Sbjct: 92 YVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTF 151
Query: 390 AEVFCCLPLAHVLNQKVFVVHGGLFSVDGVKLSDIKTIDRFCEPPEEGLMCELLWSDP-Q 448
+ F CLP+A ++++K+F HGGL S D + I+ I R + P++GL+C+LLWSDP +
Sbjct: 152 TDCFNCLPIAAIVDEKIFCCHGGL-SPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 210
Query: 449 PLPGRGPSKRGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPN 508
+ G G + RGV +FGA+V +FL + LDL+ R+H+V ++GYE +L+T+FSAPN
Sbjct: 211 DVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 270
Query: 509 YCDQMGNKGAFI 520
YC + N GA +
Sbjct: 271 YCGEFDNAGAMM 282
>pdb|1U32|A Chain A, Crystal Structure Of A Protein Phosphatase-1: Calcineurin
Hybrid Bound To Okadaic Acid
Length = 293
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/252 (43%), Positives = 163/252 (64%), Gaps = 7/252 (2%)
Query: 270 IVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGD 329
+ L++RE+ + P L++++ P +CGD+HGQ+YDLL +FE G P E N YLF GD
Sbjct: 33 LCLKSREIFLSQPILLELEAP----LKICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGD 87
Query: 330 FVDRGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKLSETFVELF 389
+VDRG S+E I L A+K P +L RGNHE S+N+IYGF E + + + + F
Sbjct: 88 YVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTF 147
Query: 390 AEVFCCLPLAHVLNQKVFVVHGGLFSVDGVKLSDIKTIDRFCEPPEEGLMCELLWSDP-Q 448
+ F CLP+A ++++K+F HGGL S D + I+ I R + P++GL+C+LLWSDP +
Sbjct: 148 TDCFNCLPIAAIVDEKIFCCHGGL-SPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 206
Query: 449 PLPGRGPSKRGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPN 508
+ G G + RGV +FGA+V +FL + LDL+ R+H+V ++GYE +L+T+FSAPN
Sbjct: 207 DVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 266
Query: 509 YCDQMGNKGAFI 520
Y D N GA +
Sbjct: 267 YLDVYNNAGAMM 278
>pdb|1S70|A Chain A, Complex Between Protein Ser/thr Phosphatase-1 (delta) And
The Myosin Phosphatase Targeting Subunit 1 (mypt1)
Length = 330
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/252 (42%), Positives = 161/252 (63%), Gaps = 7/252 (2%)
Query: 270 IVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGD 329
+ +++RE+ + P L++++ P +CGD+HGQ+ DLL +FE G P E N YLF GD
Sbjct: 40 LCIKSREIFLSQPILLELEAP----LKICGDIHGQYTDLLRLFEYGGFPPEAN-YLFLGD 94
Query: 330 FVDRGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKLSETFVELF 389
+VDRG S+E I L A+K P +L RGNHE S+N+IYGF E + + + + F
Sbjct: 95 YVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNIKLWKTF 154
Query: 390 AEVFCCLPLAHVLNQKVFVVHGGLFSVDGVKLSDIKTIDRFCEPPEEGLMCELLWSDP-Q 448
+ F CLP+A ++++K+F HGGL S D + I+ I R + P+ GL+C+LLWSDP +
Sbjct: 155 TDCFNCLPIAAIVDEKIFCCHGGL-SPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDK 213
Query: 449 PLPGRGPSKRGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPN 508
+ G G + RGV +FGADV +FL + LDL+ R+H+V ++GYE +L+T+FSAPN
Sbjct: 214 DVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 273
Query: 509 YCDQMGNKGAFI 520
YC + N G +
Sbjct: 274 YCGEFDNAGGMM 285
>pdb|1AUI|A Chain A, Human Calcineurin Heterodimer
Length = 521
Score = 218 bits (555), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 175/308 (56%), Gaps = 27/308 (8%)
Query: 262 LHKRYAFQIVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEE 321
L + A +I+ + +LR +L+DID P TVCGD+HGQF+DL+ +FE+ G P+
Sbjct: 56 LEESVALRIITEGASILRQEKNLLDIDAP----VTVCGDIHGQFFDLMKLFEVGGSPANT 111
Query: 322 NPYLFNGDFVDRGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKL 381
YLF GD+VDRG FS+E +L L+A K + P ++L RGNHE + + + + F+ E + K
Sbjct: 112 R-YLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY 170
Query: 382 SETFVELFAEVFCCLPLAHVLNQKVFVVHGGLFSVDGVKLSDIKTIDRFCEPPEEGLMCE 441
SE + + F CLPLA ++NQ+ VHGGL S + L DI+ +DRF EPP G MC+
Sbjct: 171 SERVYDACMDAFDCLPLAALMNQQFLCVHGGL-SPEINTLDDIRKLDRFKEPPAYGPMCD 229
Query: 442 LLWSDPQPLPGRGPSK--------RGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYE 493
+LWSDP G ++ RG + FLQ N+L ++R+HE +D GY
Sbjct: 230 ILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYR 289
Query: 494 IEHDGK------LITVFSAPNYCDQMGNKGAFIRFEAPTLKPNIVTFAAVPHPDVKPMAY 547
+ + LIT+FSAPNY D NK A +++E + NI F PHP P
Sbjct: 290 MYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM--NIRQFNCSPHPYWLP--- 344
Query: 548 ANNFLRMF 555
NF+ +F
Sbjct: 345 --NFMDVF 350
>pdb|1M63|A Chain A, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|E Chain E, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 372
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 175/308 (56%), Gaps = 27/308 (8%)
Query: 262 LHKRYAFQIVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEE 321
L + A +I+ + +LR +L+DID P TVCGD+HGQF+DL+ +FE+ G P+
Sbjct: 56 LEESVALRIITEGASILRQEKNLLDIDAP----VTVCGDIHGQFFDLMKLFEVGGSPANT 111
Query: 322 NPYLFNGDFVDRGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKL 381
YLF GD+VDRG FS+E +L L+A K + P ++L RGNHE + + + + F+ E + K
Sbjct: 112 R-YLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY 170
Query: 382 SETFVELFAEVFCCLPLAHVLNQKVFVVHGGLFSVDGVKLSDIKTIDRFCEPPEEGLMCE 441
SE + + F CLPLA ++NQ+ VHGGL S + L DI+ +DRF EPP G MC+
Sbjct: 171 SERVYDACMDAFDCLPLAALMNQQFLCVHGGL-SPEINTLDDIRKLDRFKEPPAYGPMCD 229
Query: 442 LLWSDPQPLPGRGPSK--------RGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYE 493
+LWSDP G ++ RG + FLQ N+L ++R+HE +D GY
Sbjct: 230 ILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYR 289
Query: 494 IEHDGK------LITVFSAPNYCDQMGNKGAFIRFEAPTLKPNIVTFAAVPHPDVKPMAY 547
+ + LIT+FSAPNY D NK A +++E + NI F PHP P
Sbjct: 290 MYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM--NIRQFNCSPHPYWLP--- 344
Query: 548 ANNFLRMF 555
NF+ +F
Sbjct: 345 --NFMDVF 350
>pdb|2P6B|A Chain A, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|C Chain C, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 383
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 175/308 (56%), Gaps = 27/308 (8%)
Query: 262 LHKRYAFQIVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEE 321
L + A +I+ + +LR +L+DID P TVCGD+HGQF+DL+ +FE+ G P+
Sbjct: 59 LEESVALRIITEGASILRQEKNLLDIDAP----VTVCGDIHGQFFDLMKLFEVGGSPANT 114
Query: 322 NPYLFNGDFVDRGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKL 381
YLF GD+VDRG FS+E +L L+A K + P ++L RGNHE + + + + F+ E + K
Sbjct: 115 R-YLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY 173
Query: 382 SETFVELFAEVFCCLPLAHVLNQKVFVVHGGLFSVDGVKLSDIKTIDRFCEPPEEGLMCE 441
SE + + F CLPLA ++NQ+ VHGGL S + L DI+ +DRF EPP G MC+
Sbjct: 174 SERVYDACMDAFDCLPLAALMNQQFLCVHGGL-SPEINTLDDIRKLDRFKEPPAYGPMCD 232
Query: 442 LLWSDPQPLPGRGPSK--------RGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYE 493
+LWSDP G ++ RG + FLQ N+L ++R+HE +D GY
Sbjct: 233 ILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYR 292
Query: 494 IEHDGK------LITVFSAPNYCDQMGNKGAFIRFEAPTLKPNIVTFAAVPHPDVKPMAY 547
+ + LIT+FSAPNY D NK A +++E + NI F PHP P
Sbjct: 293 MYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM--NIRQFNCSPHPYWLP--- 347
Query: 548 ANNFLRMF 555
NF+ +F
Sbjct: 348 --NFMDVF 353
>pdb|1MF8|A Chain A, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 373
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 175/308 (56%), Gaps = 27/308 (8%)
Query: 262 LHKRYAFQIVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEE 321
L + A +I+ + +LR +L+DID P TVCGD+HGQF+DL+ +FE+ G P+
Sbjct: 37 LEESVALRIITEGASILRQEKNLLDIDAP----VTVCGDIHGQFFDLMKLFEVGGSPANT 92
Query: 322 NPYLFNGDFVDRGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKL 381
YLF GD+VDRG FS+E +L L+A K + P ++L RGNHE + + + + F+ E + K
Sbjct: 93 R-YLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY 151
Query: 382 SETFVELFAEVFCCLPLAHVLNQKVFVVHGGLFSVDGVKLSDIKTIDRFCEPPEEGLMCE 441
SE + + F CLPLA ++NQ+ VHGGL S + L DI+ +DRF EPP G MC+
Sbjct: 152 SERVYDACMDAFDCLPLAALMNQQFLCVHGGL-SPEINTLDDIRKLDRFKEPPAYGPMCD 210
Query: 442 LLWSDPQPLPGRGPSK--------RGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYE 493
+LWSDP G ++ RG + FLQ N+L ++R+HE +D GY
Sbjct: 211 ILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYR 270
Query: 494 IEHDGK------LITVFSAPNYCDQMGNKGAFIRFEAPTLKPNIVTFAAVPHPDVKPMAY 547
+ + LIT+FSAPNY D NK A +++E + NI F PHP P
Sbjct: 271 MYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM--NIRQFNCSPHPYWLP--- 325
Query: 548 ANNFLRMF 555
NF+ +F
Sbjct: 326 --NFMDVF 331
>pdb|3LL8|A Chain A, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|C Chain C, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 357
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 175/308 (56%), Gaps = 27/308 (8%)
Query: 262 LHKRYAFQIVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEE 321
L + A +I+ + +LR +L+DID P TVCGD+HGQF+DL+ +FE+ G P+
Sbjct: 43 LEESVALRIITEGASILRQEKNLLDIDAP----VTVCGDIHGQFFDLMKLFEVGGSPANT 98
Query: 322 NPYLFNGDFVDRGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKL 381
YLF GD+VDRG FS+E +L L+A K + P ++L RGNHE + + + + F+ E + K
Sbjct: 99 R-YLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY 157
Query: 382 SETFVELFAEVFCCLPLAHVLNQKVFVVHGGLFSVDGVKLSDIKTIDRFCEPPEEGLMCE 441
SE + + F CLPLA ++NQ+ VHGGL S + L DI+ +DRF EPP G MC+
Sbjct: 158 SERVYDACMDAFDCLPLAALMNQQFLCVHGGL-SPEINTLDDIRKLDRFKEPPAYGPMCD 216
Query: 442 LLWSDPQPLPGRGPSK--------RGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYE 493
+LWSDP G ++ RG + FLQ N+L ++R+HE +D GY
Sbjct: 217 ILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYR 276
Query: 494 IEHDGK------LITVFSAPNYCDQMGNKGAFIRFEAPTLKPNIVTFAAVPHPDVKPMAY 547
+ + LIT+FSAPNY D NK A +++E + NI F PHP P
Sbjct: 277 MYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM--NIRQFNCSPHPYWLP--- 331
Query: 548 ANNFLRMF 555
NF+ +F
Sbjct: 332 --NFMDVF 337
>pdb|1TCO|A Chain A, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
Length = 375
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 175/308 (56%), Gaps = 27/308 (8%)
Query: 262 LHKRYAFQIVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEE 321
L + A +I+ + +LR +L+DID P TVCGD+HGQF+DL+ +FE+ G P+
Sbjct: 39 LEETVALRIITEGASILRQEKNLLDIDAP----VTVCGDIHGQFFDLMKLFEVGGSPANT 94
Query: 322 NPYLFNGDFVDRGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKL 381
YLF GD+VDRG FS+E +L L+A K + P ++L RGNHE + + + + F+ E + K
Sbjct: 95 R-YLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY 153
Query: 382 SETFVELFAEVFCCLPLAHVLNQKVFVVHGGLFSVDGVKLSDIKTIDRFCEPPEEGLMCE 441
SE + + F CLPLA ++NQ+ VHGGL S + L DI+ +DRF EPP G MC+
Sbjct: 154 SERVYDACMDAFDCLPLAALMNQQFLCVHGGL-SPEINTLDDIRKLDRFKEPPAYGPMCD 212
Query: 442 LLWSDPQPLPGRGPSK--------RGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYE 493
+LWSDP G ++ RG + FLQ N+L ++R+HE +D GY
Sbjct: 213 ILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYR 272
Query: 494 IEHDGK------LITVFSAPNYCDQMGNKGAFIRFEAPTLKPNIVTFAAVPHPDVKPMAY 547
+ + LIT+FSAPNY D NK A +++E + NI F PHP P
Sbjct: 273 MYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM--NIRQFNCSPHPYWLP--- 327
Query: 548 ANNFLRMF 555
NF+ +F
Sbjct: 328 --NFMDVF 333
>pdb|2JOG|A Chain A, Structure Of The Calcineurin-Nfat Complex
Length = 327
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 119/297 (40%), Positives = 170/297 (57%), Gaps = 22/297 (7%)
Query: 262 LHKRYAFQIVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEE 321
L + A +I+ + +LR +L+DID P TVCGD+HGQF+DL+ +FE+ G P+
Sbjct: 36 LEESVALRIITEGASILRQEKNLLDIDAP----VTVCGDIHGQFFDLMKLFEVGGSPANT 91
Query: 322 NPYLFNGDFVDRGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKL 381
YLF GD+VDRG FS+E +L L+A K + P ++L RGNHE + + + + F+ E + K
Sbjct: 92 R-YLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY 150
Query: 382 SETFVELFAEVFCCLPLAHVLNQKVFVVHGGLFSVDGVKLSDIKTIDRFCEPPEEGLMCE 441
SE + + F CLPLA ++NQ+ VHGGL S + L DI+ +DRF EPP G MC+
Sbjct: 151 SERVYDACMDAFDCLPLAALMNQQFLCVHGGL-SPEINTLDDIRKLDRFKEPPAYGPMCD 209
Query: 442 LLWSDPQPLPGRGPSK--------RGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYE 493
+LWSDP G ++ RG + FLQ N+L ++R+HE +D GY
Sbjct: 210 ILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYR 269
Query: 494 IEHDGK------LITVFSAPNYCDQMGNKGAFIRFEAPTLKPNIVTFAAVPHPDVKP 544
+ + LIT+FSAPNY D NK A +++E + NI F PHP P
Sbjct: 270 MYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM--NIRQFNCSPHPYWLP 324
>pdb|3P71|C Chain C, Crystal Structure Of The Complex Of Lcmt-1 And Pp2a
Length = 304
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 112/269 (41%), Positives = 161/269 (59%), Gaps = 10/269 (3%)
Query: 273 QTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVD 332
+ +E+L ++ ++ P TVCGDVHGQF+DL+ +F + G + N YLF GD+VD
Sbjct: 34 KAKEILTKESNVQEVRCP----VTVCGDVHGQFHDLMELFRIGGKSPDTN-YLFMGDYVD 88
Query: 333 RGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKLSETFV-ELFAE 391
RG +SVE + L A K I + RGNHES+ + ++YGF E K V + F +
Sbjct: 89 RGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTD 148
Query: 392 VFCCLPLAHVLNQKVFVVHGGLF-SVDGVKLSDIKTIDRFCEPPEEGLMCELLWSDPQPL 450
+F LPL +++ ++F +HGGL S+D L I+ +DR E P EG MC+LLWSDP
Sbjct: 149 LFDYLPLTALVDGQIFCLHGGLSPSID--TLDHIRALDRLQEVPHEGPMCDLLWSDPDDR 206
Query: 451 PGRGPSKRGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPNYC 510
G G S RG G +FG D+++ F N L LV R+H++ EGY HD ++T+FSAPNYC
Sbjct: 207 GGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYC 266
Query: 511 DQMGNKGAFIRFEAPTLKPNIVTFAAVPH 539
+ GN+ A + + TLK + + F PH
Sbjct: 267 YRCGNQAAIMELD-DTLKYSFLQFDPAPH 294
>pdb|2NYL|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYL|F Chain F, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYM|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
pdb|2NYM|F Chain F, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
Length = 293
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 111/268 (41%), Positives = 160/268 (59%), Gaps = 10/268 (3%)
Query: 273 QTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVD 332
+ +E+L ++ ++ P TVCGDVHGQF+DL+ +F + G + N YLF GD+VD
Sbjct: 33 KAKEILTKESNVQEVRCP----VTVCGDVHGQFHDLMELFRIGGKSPDTN-YLFMGDYVD 87
Query: 333 RGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKLSETFV-ELFAE 391
RG +SVE + L A K I + RGNHES+ + ++YGF E K V + F +
Sbjct: 88 RGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTD 147
Query: 392 VFCCLPLAHVLNQKVFVVHGGLF-SVDGVKLSDIKTIDRFCEPPEEGLMCELLWSDPQPL 450
+F LPL +++ ++F +HGGL S+D L I+ +DR E P EG MC+LLWSDP
Sbjct: 148 LFDYLPLTALVDGQIFCLHGGLSPSID--TLDHIRALDRLQEVPHEGPMCDLLWSDPDDR 205
Query: 451 PGRGPSKRGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPNYC 510
G G S RG G +FG D+++ F N L LV R+H++ EGY HD ++T+FSAPNYC
Sbjct: 206 GGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYC 265
Query: 511 DQMGNKGAFIRFEAPTLKPNIVTFAAVP 538
+ GN+ A + + TLK + + F P
Sbjct: 266 YRCGNQAAIMELD-DTLKYSFLQFDPAP 292
>pdb|2IE3|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound
To Tumor- Inducing Toxins
Length = 309
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 111/268 (41%), Positives = 160/268 (59%), Gaps = 10/268 (3%)
Query: 273 QTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVD 332
+ +E+L ++ ++ P TVCGDVHGQF+DL+ +F + G + N YLF GD+VD
Sbjct: 34 KAKEILTKESNVQEVRCP----VTVCGDVHGQFHDLMELFRIGGKSPDTN-YLFMGDYVD 88
Query: 333 RGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKLSETFV-ELFAE 391
RG +SVE + L A K I + RGNHES+ + ++YGF E K V + F +
Sbjct: 89 RGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTD 148
Query: 392 VFCCLPLAHVLNQKVFVVHGGLF-SVDGVKLSDIKTIDRFCEPPEEGLMCELLWSDPQPL 450
+F LPL +++ ++F +HGGL S+D L I+ +DR E P EG MC+LLWSDP
Sbjct: 149 LFDYLPLTALVDGQIFCLHGGLSPSID--TLDHIRALDRLQEVPHEGPMCDLLWSDPDDR 206
Query: 451 PGRGPSKRGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPNYC 510
G G S RG G +FG D+++ F N L LV R+H++ EGY HD ++T+FSAPNYC
Sbjct: 207 GGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYC 266
Query: 511 DQMGNKGAFIRFEAPTLKPNIVTFAAVP 538
+ GN+ A + + TLK + + F P
Sbjct: 267 YRCGNQAAIMELD-DTLKYSFLQFDPAP 293
>pdb|2IE4|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound
To Okadaic Acid
pdb|2NPP|C Chain C, Structure Of The Protein Phosphatase 2a Holoenzyme
pdb|2NPP|F Chain F, Structure Of The Protein Phosphatase 2a Holoenzyme
pdb|3DW8|C Chain C, Structure Of A Protein Phosphatase 2a Holoenzyme With B55
Subunit
pdb|3DW8|F Chain F, Structure Of A Protein Phosphatase 2a Holoenzyme With B55
Subunit
pdb|3K7V|C Chain C, Protein Phosphatase 2a Core Complex Bound To
Dinophysistoxin-1
pdb|3K7W|C Chain C, Protein Phosphatase 2a Core Complex Bound To
Dinophysistoxin-2
Length = 309
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 111/268 (41%), Positives = 160/268 (59%), Gaps = 10/268 (3%)
Query: 273 QTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVD 332
+ +E+L ++ ++ P TVCGDVHGQF+DL+ +F + G + N YLF GD+VD
Sbjct: 34 KAKEILTKESNVQEVRCP----VTVCGDVHGQFHDLMELFRIGGKSPDTN-YLFMGDYVD 88
Query: 333 RGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKLSETFV-ELFAE 391
RG +SVE + L A K I + RGNHES+ + ++YGF E K V + F +
Sbjct: 89 RGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTD 148
Query: 392 VFCCLPLAHVLNQKVFVVHGGLF-SVDGVKLSDIKTIDRFCEPPEEGLMCELLWSDPQPL 450
+F LPL +++ ++F +HGGL S+D L I+ +DR E P EG MC+LLWSDP
Sbjct: 149 LFDYLPLTALVDGQIFCLHGGLSPSID--TLDHIRALDRLQEVPHEGPMCDLLWSDPDDR 206
Query: 451 PGRGPSKRGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPNYC 510
G G S RG G +FG D+++ F N L LV R+H++ EGY HD ++T+FSAPNYC
Sbjct: 207 GGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYC 266
Query: 511 DQMGNKGAFIRFEAPTLKPNIVTFAAVP 538
+ GN+ A + + TLK + + F P
Sbjct: 267 YRCGNQAAIMELD-DTLKYSFLQFDPAP 293
>pdb|3C5W|C Chain C, Complex Between Pp2a-Specific Methylesterase Pme-1 And
Pp2a Core Enzyme
Length = 310
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 111/268 (41%), Positives = 160/268 (59%), Gaps = 10/268 (3%)
Query: 273 QTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVD 332
+ +E+L ++ ++ P TVCGDVHGQF+DL+ +F + G + N YLF GD+VD
Sbjct: 35 KAKEILTKESNVQEVRCP----VTVCGDVHGQFHDLMELFRIGGKSPDTN-YLFMGDYVD 89
Query: 333 RGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKLSETFV-ELFAE 391
RG +SVE + L A K I + RGNHES+ + ++YGF E K V + F +
Sbjct: 90 RGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTD 149
Query: 392 VFCCLPLAHVLNQKVFVVHGGLF-SVDGVKLSDIKTIDRFCEPPEEGLMCELLWSDPQPL 450
+F LPL +++ ++F +HGGL S+D L I+ +DR E P EG MC+LLWSDP
Sbjct: 150 LFDYLPLTALVDGQIFCLHGGLSPSID--TLDHIRALDRLQEVPHEGPMCDLLWSDPDDR 207
Query: 451 PGRGPSKRGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPNYC 510
G G S RG G +FG D+++ F N L LV R+H++ EGY HD ++T+FSAPNYC
Sbjct: 208 GGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYC 267
Query: 511 DQMGNKGAFIRFEAPTLKPNIVTFAAVP 538
+ GN+ A + + TLK + + F P
Sbjct: 268 YRCGNQAAIMELD-DTLKYSFLQFDPAP 294
>pdb|3FGA|C Chain C, Structural Basis Of Pp2a And Sgo Interaction
Length = 309
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/268 (41%), Positives = 160/268 (59%), Gaps = 10/268 (3%)
Query: 273 QTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVD 332
+ +E+L ++ ++ P TVCGDVHGQF+DL+ +F + G + N YLF GD+V+
Sbjct: 34 KAKEILTKESNVQEVRCP----VTVCGDVHGQFHDLMELFRIGGKSPDTN-YLFMGDYVN 88
Query: 333 RGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKLSETFV-ELFAE 391
RG +SVE + L A K I + RGNHES+ + ++YGF E K V + F +
Sbjct: 89 RGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTD 148
Query: 392 VFCCLPLAHVLNQKVFVVHGGLF-SVDGVKLSDIKTIDRFCEPPEEGLMCELLWSDPQPL 450
+F LPL +++ ++F +HGGL S+D L I+ +DR E P EG MC+LLWSDP
Sbjct: 149 LFDYLPLTALVDGQIFCLHGGLSPSID--TLDHIRALDRLQEVPHEGPMCDLLWSDPDDR 206
Query: 451 PGRGPSKRGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPNYC 510
G G S RG G +FG D+++ F N L LV R+H++ EGY HD ++T+FSAPNYC
Sbjct: 207 GGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYC 266
Query: 511 DQMGNKGAFIRFEAPTLKPNIVTFAAVP 538
+ GN+ A + + TLK + + F P
Sbjct: 267 YRCGNQAAIMELD-DTLKYSFLQFDPAP 293
>pdb|2IAE|C Chain C, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme.
pdb|2IAE|F Chain F, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme
Length = 309
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/268 (41%), Positives = 160/268 (59%), Gaps = 10/268 (3%)
Query: 273 QTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVD 332
+ +E+L ++ ++ P TVCGDVHGQF+DL+ +F + G + N YLF GD+V+
Sbjct: 34 KAKEILTKESNVQEVRCP----VTVCGDVHGQFHDLMELFRIGGKSPDTN-YLFMGDYVN 88
Query: 333 RGSFSVEVILTLFAFKCMCPSAIYLSRGNHESKSMNKIYGFEGEVRSKLSETFV-ELFAE 391
RG +SVE + L A K I + RGNHES+ + ++YGF E K V + F +
Sbjct: 89 RGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTD 148
Query: 392 VFCCLPLAHVLNQKVFVVHGGLF-SVDGVKLSDIKTIDRFCEPPEEGLMCELLWSDPQPL 450
+F LPL +++ ++F +HGGL S+D L I+ +DR E P EG MC+LLWSDP
Sbjct: 149 LFDYLPLTALVDGQIFCLHGGLSPSID--TLDHIRALDRLQEVPHEGPMCDLLWSDPDDR 206
Query: 451 PGRGPSKRGVGLSFGADVTKRFLQDNSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPNYC 510
G G S RG G +FG D+++ F N L LV R+H++ EGY HD ++T+FSAPNYC
Sbjct: 207 GGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYC 266
Query: 511 DQMGNKGAFIRFEAPTLKPNIVTFAAVP 538
+ GN+ A + + TLK + + F P
Sbjct: 267 YRCGNQAAIMELD-DTLKYSFLQFDPAP 293
>pdb|1A17|A Chain A, Tetratricopeptide Repeats Of Protein Phosphatase 5
Length = 166
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/157 (50%), Positives = 110/157 (70%), Gaps = 1/157 (0%)
Query: 8 NSSVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSA 67
+ ++ RAEELK AN+ F+AK Y AI YSQAIELN NA+YY NR+ A+ + E YG A
Sbjct: 7 DGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYA 66
Query: 68 IQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEK 127
+ DA++AIE+D +Y KGYYRR A+ +A+GKF+ AL+D++ V K+ P+D DA K +EC K
Sbjct: 67 LGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNK 126
Query: 128 AVKKLKFEEAIAVPESERHSVADSIDYQSIGMSPSSS 164
VK+ FE AIA E +R SV DS+D +S+ + S
Sbjct: 127 IVKQKAFERAIAGDEHKR-SVVDSLDIESMTIEDEYS 162
>pdb|2BUG|A Chain A, Solution Structure Of The Tpr Domain From Protein
Phosphatase 5 In Complex With Hsp90 Derived Peptide
Length = 140
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 91/124 (73%)
Query: 8 NSSVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSA 67
+ ++ RAEELK AN+ F+AK Y AI YSQAIELN NA+YY NR+ A+ + E YG A
Sbjct: 15 DGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYA 74
Query: 68 IQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEK 127
+ DA++AIE+D +Y KGYYRR A+ +A+GKF+ AL+D++ V K+ P+D DA K +EC K
Sbjct: 75 LNDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNK 134
Query: 128 AVKK 131
VK+
Sbjct: 135 IVKQ 138
>pdb|2VYI|A Chain A, Crystal Structure Of The Tpr Domain Of Human Sgt
pdb|2VYI|B Chain B, Crystal Structure Of The Tpr Domain Of Human Sgt
Length = 131
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 12 SRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDA 71
+ AE LK NE + + + A+ Y +AIELN NAVY+ NRA A++KL Y A+QD
Sbjct: 10 AEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDC 69
Query: 72 SKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKK 131
+AI IDP Y K Y R G A ++ K EA+ +++ +L P++ +K + +
Sbjct: 70 ERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLK-----IAE 124
Query: 132 LKFEEA 137
LK EA
Sbjct: 125 LKLREA 130
>pdb|3KD7|A Chain A, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
pdb|3KD7|B Chain B, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
pdb|3KD7|C Chain C, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
pdb|3KD7|D Chain D, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
pdb|3KD7|E Chain E, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
Length = 125
Score = 83.2 bits (204), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 65/109 (59%)
Query: 14 AEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASK 73
AE K L N ++ Y +AI+ Y +A+EL+ NA + N A+ K +Y AI+ K
Sbjct: 9 AEAWKNLGNAYYKQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGDYQKAIEYYQK 68
Query: 74 AIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKV 122
A+E+DP K +YRRG AY G +++A++D+Q+ +L PN+ A Q +
Sbjct: 69 ALELDPNNAKAWYRRGNAYYKQGDYQKAIEDYQKALELDPNNAKAKQNL 117
Score = 49.7 bits (117), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 20 LANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDP 79
L N ++ Y +AI+ Y +A+EL+ NA + R A+ K +Y AI+D KA+E+DP
Sbjct: 49 LGNAYYKQGDYQKAIEYYQKALELDPNNAKAWYRRGNAYYKQGDYQKAIEDYQKALELDP 108
Query: 80 RYPKGYYRRGAAYLAMG 96
K G A G
Sbjct: 109 NNAKAKQNLGNAKQKQG 125
Score = 45.8 bits (107), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 47 NAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQ 106
+A + N A+ K +Y AI+ KA+E+DP +Y G AY G +++A++ +Q
Sbjct: 8 SAEAWKNLGNAYYKQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGDYQKAIEYYQ 67
Query: 107 QVKKLSPNDPDA 118
+ +L PN+ A
Sbjct: 68 KALELDPNNAKA 79
>pdb|4GCO|A Chain A, Central Domain Of Stress-Induced Protein-1 (Sti-1) From
C.Elegans
Length = 126
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 67/112 (59%)
Query: 14 AEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASK 73
A+E K NE F+ Y A+ Y++A++ + +NA+ Y+NRA TKL E+ A+ D
Sbjct: 13 AQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDT 72
Query: 74 AIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKEC 125
I +D ++ KGY R+ A +AM ++ +A + ++ ++ P++ +A + V+ C
Sbjct: 73 CIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNC 124
>pdb|1NA0|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
pdb|1NA0|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
Length = 125
Score = 72.0 bits (175), Expect = 8e-13, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 61/109 (55%)
Query: 14 AEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASK 73
AE L N ++ Y +AI+ Y +A+EL+ NA + N A+ K +Y AI+ K
Sbjct: 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQK 68
Query: 74 AIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKV 122
A+E+DP + +Y G AY G + EA++ +Q+ +L PN+ +A Q +
Sbjct: 69 ALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNL 117
Score = 48.9 bits (115), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 44 NSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALK 103
NS A Y N A+ K +Y AI+ KA+E+DP + +Y G AY G + EA++
Sbjct: 7 NSAEAWY--NLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIE 64
Query: 104 DFQQVKKLSPNDPDA 118
+Q+ +L PN+ +A
Sbjct: 65 YYQKALELDPNNAEA 79
Score = 45.4 bits (106), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 42/85 (49%)
Query: 12 SRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDA 71
+ AE L N ++ Y +AI+ Y +A+EL+ NA + N A+ K +Y AI+
Sbjct: 41 NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYY 100
Query: 72 SKAIEIDPRYPKGYYRRGAAYLAMG 96
KA+E+DP + G A G
Sbjct: 101 QKALELDPNNAEAKQNLGNAKQKQG 125
>pdb|2LNI|A Chain A, Solution Nmr Structure Of Stress-Induced-Phosphoprotein 1
Sti1 From Homo Sapiens, Northeast Structural Genomics
Consortium Target Hr4403e
Length = 133
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 65/109 (59%)
Query: 17 LKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIE 76
+K NE F+ Y QA+ Y++AI+ N ++A Y+NRA +TKL E+ A++D + I+
Sbjct: 19 VKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQ 78
Query: 77 IDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKEC 125
++P + KGY R+ AA AM + +A+ +Q+ L + +AA + C
Sbjct: 79 LEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRC 127
>pdb|2DBA|A Chain A, The Solution Structure Of The Tetratrico Peptide Repeat Of
Human Smooth Muscle Cell Associated Protein-1, Isoform 2
Length = 148
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 1 MPNMETENSSVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNS---QNAVYYANRAFA 57
P S E+L+ NE F+ Y A+ Y+QA+ L++ AV + NRA
Sbjct: 15 TPEPRPATPGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAAC 74
Query: 58 HTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPND 115
H KLE+Y A +ASKAIE D K YRR A +G+ +A+ D Q+ L P +
Sbjct: 75 HLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKN 132
>pdb|1ELW|A Chain A, Crystal Structure Of The Tpr1 Domain Of Hop In Complex
With A Hsc70 Peptide
pdb|1ELW|B Chain B, Crystal Structure Of The Tpr1 Domain Of Hop In Complex
With A Hsc70 Peptide
Length = 118
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 64/116 (55%)
Query: 11 VSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQD 70
+ + ELK N+A A+ YS+AI+L+ N V Y+NR+ A+ K +Y A +D
Sbjct: 1 MEQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYED 60
Query: 71 ASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECE 126
K +++ P + KGY R+ AA + +F+EA + +++ K N+P + ++ E
Sbjct: 61 GCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116
>pdb|2FO7|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
(Trigonal Crystal Form)
pdb|2HYZ|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
(Orthorombic Crystal Form)
Length = 136
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 59/105 (56%)
Query: 14 AEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASK 73
AE L N ++ Y +AI+ Y +A+EL+ ++A + N A+ K +Y AI+ K
Sbjct: 1 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQK 60
Query: 74 AIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDA 118
A+E+DPR + +Y G AY G + EA++ +Q+ +L P +A
Sbjct: 61 ALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEA 105
Score = 65.9 bits (159), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 57/100 (57%)
Query: 14 AEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASK 73
AE L N ++ Y +AI+ Y +A+EL+ ++A + N A+ K +Y AI+ K
Sbjct: 35 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQK 94
Query: 74 AIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSP 113
A+E+DPR + +Y G AY G + EA++ +Q+ +L P
Sbjct: 95 ALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP 134
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 14 AEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASK 73
AE L N ++ Y +AI+ Y +A+EL+ ++A + N A+ K +Y AI+ K
Sbjct: 69 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQK 128
Query: 74 AIEIDPR 80
A+E+DPR
Sbjct: 129 ALELDPR 135
>pdb|2WQH|A Chain A, Crystal Structure Of Ctpr3y3
Length = 125
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 59/109 (54%)
Query: 14 AEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASK 73
AE L N ++ Y +AI+ Y +A+EL NA + N A+ K +Y AI+ K
Sbjct: 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQK 68
Query: 74 AIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKV 122
A+E+ P + +Y G AY G + EA++ +Q+ +L PN+ +A Q +
Sbjct: 69 ALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAKQNL 117
Score = 44.7 bits (104), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 44 NSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALK 103
NS A Y N A+ K +Y AI+ KA+E+ P + +Y G AY G + EA++
Sbjct: 7 NSAEAWY--NLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIE 64
Query: 104 DFQQVKKLSPNDPDA 118
+Q+ +L PN+ +A
Sbjct: 65 YYQKALELYPNNAEA 79
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 12 SRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDA 71
+ AE L N ++ Y +AI+ Y +A+EL NA + N A+ K +Y AI+
Sbjct: 41 NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYY 100
Query: 72 SKAIEIDPRYPKGYYRRGAAYLAMG 96
KA+E+ P + G A G
Sbjct: 101 QKALELYPNNAEAKQNLGNAKQKQG 125
>pdb|3SZ7|A Chain A, Crystal Structure Of The Sgt2 Tpr Domain From Aspergillus
Fumigatus
Length = 164
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 58/94 (61%)
Query: 14 AEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASK 73
+++LK+ N A K+YS+AIDLY+QA+ + N +Y +NRA A++ ++ A +DA
Sbjct: 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAEL 70
Query: 74 AIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQ 107
A +DP+Y K + R G A M +K A + +++
Sbjct: 71 ATVVDPKYSKAWSRLGLARFDMADYKGAKEAYEK 104
>pdb|1QZ2|A Chain A, Crystal Structure Of Fkbp52 C-Terminal Domain Complex With
The C-Terminal Peptide Meevd Of Hsp90
pdb|1QZ2|B Chain B, Crystal Structure Of Fkbp52 C-Terminal Domain Complex With
The C-Terminal Peptide Meevd Of Hsp90
pdb|1QZ2|C Chain C, Crystal Structure Of Fkbp52 C-Terminal Domain Complex With
The C-Terminal Peptide Meevd Of Hsp90
Length = 336
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query: 38 SQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGK 97
+QA+ L S + N A H KL+ + +AI+ +KA+E+D KG +RRG A+LA+
Sbjct: 191 AQALRLAS-----HLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVND 245
Query: 98 FKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKK 131
F+ A DFQ+V +L PN+ A ++ C++ +++
Sbjct: 246 FELARADFQKVLQLYPNNKAAKTQLAVCQQRIRR 279
>pdb|2C2L|A Chain A, Crystal Structure Of The Chip U-Box E3 Ubiquitin Ligase
pdb|2C2L|B Chain B, Crystal Structure Of The Chip U-Box E3 Ubiquitin Ligase
pdb|2C2L|C Chain C, Crystal Structure Of The Chip U-Box E3 Ubiquitin Ligase
pdb|2C2L|D Chain D, Crystal Structure Of The Chip U-Box E3 Ubiquitin Ligase
Length = 281
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%)
Query: 14 AEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASK 73
A+ELK N F +KY +A Y +AI N AVYY NRA + K+++ A+ D +
Sbjct: 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRR 63
Query: 74 AIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLS 112
A+E+D + K ++ G L M + EA+ + Q+ L+
Sbjct: 64 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLA 102
>pdb|1P5Q|A Chain A, Crystal Structure Of Fkbp52 C-Terminal Domain
pdb|1P5Q|B Chain B, Crystal Structure Of Fkbp52 C-Terminal Domain
pdb|1P5Q|C Chain C, Crystal Structure Of Fkbp52 C-Terminal Domain
Length = 336
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Query: 38 SQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGK 97
+QA+ L S + N A H KL+ + +AI+ +KA+E+D KG RRG A+LA+
Sbjct: 191 AQALRLAS-----HLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVND 245
Query: 98 FKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKK 131
F+ A DFQ+V +L PN+ A ++ C++ +++
Sbjct: 246 FELARADFQKVLQLYPNNKAAKTQLAVCQQRIRR 279
>pdb|3Q47|B Chain B, Crystal Structure Of Tpr Domain Of Chip Complexed With
Pseudophosphorylated Smad1 Peptide
pdb|3Q49|B Chain B, Crystal Structure Of The Tpr Domain Of Chip Complexed With
Hsp70-C Peptide
pdb|3Q4A|B Chain B, Crystal Structure Of The Tpr Domain Of Chip Complexed With
Phosphorylated Smad1 Peptide
Length = 137
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%)
Query: 14 AEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASK 73
A+ELK N F +KY +A Y +AI N AVYY NRA + K+++ A+ D +
Sbjct: 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRR 68
Query: 74 AIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLS 112
A+E+D + K ++ G L M + EA+ + Q+ L+
Sbjct: 69 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLA 107
>pdb|1KT0|A Chain A, Structure Of The Large Fkbp-like Protein, Fkbp51, Involved
In Steroid Receptor Complexes
Length = 457
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Query: 25 FRAKKYSQAIDLYSQAI----------ELNSQNA-----VYYANRAFAHTKLEEYGSAIQ 69
F+ KY QA+ Y + + E S+ + + N A + KL EY A++
Sbjct: 279 FKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVE 338
Query: 70 DASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAV 129
KA+ +D KG YRRG A L M +F+ A DF++V +++P + A ++ C+K
Sbjct: 339 CCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKA 398
Query: 130 KK 131
K+
Sbjct: 399 KE 400
>pdb|3FP2|A Chain A, Crystal Structure Of Tom71 Complexed With Hsp82 C-Terminal
Fragment
pdb|3FP3|A Chain A, Crystal Structure Of Tom71
pdb|3FP4|A Chain A, Crystal Structure Of Tom71 Complexed With Ssa1 C-Terminal
Fragment
Length = 537
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 14 AEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASK 73
A +LK N F AK +++AI Y AIEL+ V+Y+N + + + I+ +K
Sbjct: 25 AVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTK 84
Query: 74 AIEIDPRYPKGYYRRGAAYLAMGKFKEALKDF 105
A+EI P + K RR +A ++G F +A+ D
Sbjct: 85 ALEIKPDHSKALLRRASANESLGNFTDAMFDL 116
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 73 KAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPND 115
KA++++P YP YY RG Y + +K A +DFQ+ + L+P +
Sbjct: 301 KAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPEN 343
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 37 YSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMG 96
+ +A++LN + Y +R + L++Y +A +D KA ++P Y + G
Sbjct: 299 FQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQG 358
Query: 97 KFKEALKDFQQVKKLSPNDPD 117
KF E+ F + K P P+
Sbjct: 359 KFTESEAFFNETKLKFPTLPE 379
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 48 AVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQ 107
AV NR + + AI+ AIE+DP P Y A Y++ G ++ ++ +
Sbjct: 25 AVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTK 84
Query: 108 VKKLSPNDPDA 118
++ P+ A
Sbjct: 85 ALEIKPDHSKA 95
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 62 EEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQK 121
E++ +AI+ +KA E+DPR + L M K EA++ F+ D+A
Sbjct: 442 EKFNAAIKLLTKACELDPRSEQAKIGLAQLKLQMEKIDEAIELFE----------DSAIL 491
Query: 122 VKECEKAVKKLKFEEAIAVPESER 145
+ ++ ++ F EA + + R
Sbjct: 492 ARTMDEKLQATTFAEAAKIQKRLR 515
>pdb|3LCA|A Chain A, Structure Of Tom71 Complexed With Hsp70 Ssa1 C Terminal
Tail Indicating Conformational Plasticity
Length = 533
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 14 AEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASK 73
A +LK N F AK +++AI Y AIEL+ V+Y+N + + + I+ +K
Sbjct: 21 AVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTK 80
Query: 74 AIEIDPRYPKGYYRRGAAYLAMGKFKEALKDF 105
A+EI P + K RR +A ++G F +A+ D
Sbjct: 81 ALEIKPDHSKALLRRASANESLGNFTDAMFDL 112
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 73 KAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPND 115
KA++++P YP YY RG Y + +K A +DFQ+ + L+P +
Sbjct: 297 KAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPEN 339
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%)
Query: 37 YSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMG 96
+ +A++LN + Y +R + L++Y +A +D KA ++P Y + G
Sbjct: 295 FQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQG 354
Query: 97 KFKEALKDFQQVKKLSPNDPD 117
KF E+ F + K P P+
Sbjct: 355 KFTESEAFFNETKLKFPTLPE 375
Score = 28.5 bits (62), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 48 AVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQ 107
AV NR + + AI+ AIE+DP P Y A Y++ G ++ ++ +
Sbjct: 21 AVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTK 80
Query: 108 VKKLSPNDPDA 118
++ P+ A
Sbjct: 81 ALEIKPDHSKA 91
Score = 28.5 bits (62), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 62 EEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQK 121
E++ +AI+ +KA E+DPR + L M K EA++ F+ D+A
Sbjct: 438 EKFNAAIKLLTKACELDPRSEQAKIGLAQLKLQMEKIDEAIELFE----------DSAIL 487
Query: 122 VKECEKAVKKLKFEEAIAVPESER 145
+ ++ ++ F EA + + R
Sbjct: 488 ARTMDEKLQATTFAEAAKIQKRLR 511
>pdb|2GW1|A Chain A, Crystal Structure Of The Yeast Tom70
pdb|2GW1|B Chain B, Crystal Structure Of The Yeast Tom70
Length = 514
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 17 LKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIE 76
LK N+ FR KKY AI Y+ A+EL ++ V+Y+N + + + + ++ ++KA+E
Sbjct: 9 LKDKGNQFFRNKKYDDAIKYYNWALEL-KEDPVFYSNLSACYVSVGDLKKVVEMSTKALE 67
Query: 77 IDPRYPKGYYRRGAAYLAMGKFKEALKDF 105
+ P Y K RR +A +GKF +A+ D
Sbjct: 68 LKPDYSKVLLRRASANEGLGKFADAMFDL 96
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%)
Query: 37 YSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMG 96
+ +A++L+S N+ Y +R + L+ Y A +D KA E+DP Y +
Sbjct: 293 FDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYREN 352
Query: 97 KFKEALKDFQQVKKLSPNDPD 117
KF + F + K+ P P+
Sbjct: 353 KFDDCETLFSEAKRKFPEAPE 373
>pdb|1KT1|A Chain A, Structure Of The Large Fkbp-Like Protein, Fkbp51, Involved
In Steroid Receptor Complexes
Length = 457
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Query: 25 FRAKKYSQAIDLYSQAI----------ELNSQNA-----VYYANRAFAHTKLEEYGSAIQ 69
F+ KY QA+ Y + + E S+ + + N A + KL EY A++
Sbjct: 279 FKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVE 338
Query: 70 DASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAV 129
KA+ +D KG YRRG A L M +F+ A DF++V +++P + A ++ C+K
Sbjct: 339 CCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQKKA 398
Query: 130 KK 131
K+
Sbjct: 399 KE 400
>pdb|3UPV|A Chain A, Tpr2b-Domain:phsp70-Complex Of Yeast Sti1
Length = 126
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 13 RAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDAS 72
+AEE + E F + A+ Y++ I+ ++A Y+NRA A KL + AI D +
Sbjct: 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCN 62
Query: 73 KAIEIDPRYPKGYYRRGAAYLAMGKFKEALK--DFQQVKKLSPNDPDAAQKV 122
KAIE DP + + Y R+ A +A+ ++ AL+ D + K N+ +A+++
Sbjct: 63 KAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREI 114
>pdb|3UQ3|A Chain A, Tpr2ab-Domain:phsp90-Complex Of Yeast Sti1
Length = 258
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 13 RAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDAS 72
+AEE + E F + A+ Y++ I+ ++A Y+NRA A KL + AI D +
Sbjct: 138 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCN 197
Query: 73 KAIEIDPRYPKGYYRRGAAYLAMGKFKEALK--DFQQVKKLSPNDPDAAQKV 122
KAIE DP + + Y R+ A +A+ ++ AL+ D + K N+ +A+++
Sbjct: 198 KAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREI 249
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 12 SRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDA 71
S A++ KA N+ ++A+++ +AI+ Y++A EL+ ++ Y NRA A + EY +AI
Sbjct: 3 SMADKEKAEGNKFYKARQFDEAIEHYNKAWELH-KDITYLNNRAAAEYEKGEYETAISTL 61
Query: 72 SKAI----EIDPRY---PKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPN-DPDAAQKVK 123
+ A+ E+ Y K + R G AY +G K+ ++ +Q K L+ + D K++
Sbjct: 62 NDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQ--KSLTEHRTADILTKLR 119
Query: 124 ECEKAVKKLKFE 135
EK +KK + E
Sbjct: 120 NAEKELKKAEAE 131
>pdb|1NA3|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
pdb|1NA3|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
Length = 91
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 44 NSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALK 103
NS A Y N A+ K +Y AI+ KA+E+DP + +Y G AY G + EA++
Sbjct: 7 NSAEAWY--NLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIE 64
Query: 104 DFQQVKKLSPNDPDAAQKV 122
+Q+ +L PN+ +A Q +
Sbjct: 65 YYQKALELDPNNAEAKQNL 83
Score = 45.4 bits (106), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 14 AEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASK 73
AE L N ++ Y +AI+ Y +A+EL+ NA + N A+ K +Y AI+ K
Sbjct: 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQK 68
Query: 74 AIEIDPRYPKGYYRRGAAYLAMG 96
A+E+DP + G A G
Sbjct: 69 ALELDPNNAEAKQNLGNAKQKQG 91
>pdb|1IHG|A Chain A, Bovine Cyclophilin 40, Monoclinic Form
pdb|1IIP|A Chain A, Bovine Cyclophilin 40, Tetragonal Form
Length = 370
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 67/142 (47%), Gaps = 16/142 (11%)
Query: 14 AEELKALANEAFRAKKYSQAIDLYSQAIEL--NSQNAVYYA--------------NRAFA 57
+E+LK + N F+++ + AI Y++ + S+ A A N
Sbjct: 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGAC 282
Query: 58 HTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPD 117
K+ ++ A+ +A+EIDP K YRR + + ++ +AL D ++ ++++P D
Sbjct: 283 KLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKA 342
Query: 118 AAQKVKECEKAVKKLKFEEAIA 139
++ + ++ +K K +E A
Sbjct: 343 IQAELLKVKQKIKAQKDKEKAA 364
>pdb|2AVP|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr
Superhelix
Length = 70
Score = 45.8 bits (107), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 14 AEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASK 73
AE L N ++ Y +AI+ Y +A+EL+ ++A + N A+ K +Y AI+ K
Sbjct: 3 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQK 62
Query: 74 AIEIDPR 80
A+E+DPR
Sbjct: 63 ALELDPR 69
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 47 NAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQ 106
+A + N A+ K +Y AI+ KA+E+DPR + +Y G AY G + EA++ +Q
Sbjct: 2 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQ 61
Query: 107 QVKKLSP 113
+ +L P
Sbjct: 62 KALELDP 68
>pdb|3PE3|A Chain A, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
pdb|3PE3|B Chain B, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
pdb|3PE3|C Chain C, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
pdb|3PE3|D Chain D, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
pdb|3PE4|A Chain A, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
pdb|3PE4|C Chain C, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
pdb|3TAX|A Chain A, A Neutral Diphosphate Mimic Crosslinks The Active Site Of
Human O- Glcnac Transferase
pdb|3TAX|C Chain C, A Neutral Diphosphate Mimic Crosslinks The Active Site Of
Human O- Glcnac Transferase
pdb|4AY5|A Chain A, Human O-Glcnac Transferase (Ogt) In Complex With Udp And
Glycopeptide
pdb|4AY5|B Chain B, Human O-Glcnac Transferase (Ogt) In Complex With Udp And
Glycopeptide
pdb|4AY5|C Chain C, Human O-Glcnac Transferase (Ogt) In Complex With Udp And
Glycopeptide
pdb|4AY5|D Chain D, Human O-Glcnac Transferase (Ogt) In Complex With Udp And
Glycopeptide
pdb|4AY6|A Chain A, Human O-Glcnac Transferase (Ogt) In Complex With
Udp-5sglcnac And Substrate Peptide
pdb|4AY6|B Chain B, Human O-Glcnac Transferase (Ogt) In Complex With
Udp-5sglcnac And Substrate Peptide
pdb|4AY6|C Chain C, Human O-Glcnac Transferase (Ogt) In Complex With
Udp-5sglcnac And Substrate Peptide
pdb|4AY6|D Chain D, Human O-Glcnac Transferase (Ogt) In Complex With
Udp-5sglcnac And Substrate Peptide
pdb|4GYW|A Chain A, Crystal Structure Of Human O-Glcnac Transferase In Complex
With Udp And A Glycopeptide
pdb|4GYW|C Chain C, Crystal Structure Of Human O-Glcnac Transferase In Complex
With Udp And A Glycopeptide
pdb|4GYY|A Chain A, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac And A Peptide Substrate
pdb|4GYY|C Chain C, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac And A Peptide Substrate
pdb|4GZ3|A Chain A, Crystal Structure Of Human O-Glcnac Transferase With Udp
And A Thioglycopeptide
pdb|4GZ3|C Chain C, Crystal Structure Of Human O-Glcnac Transferase With Udp
And A Thioglycopeptide
pdb|4GZ5|A Chain A, Crystal Structure Of Human O-Glcnac Transferase With
Udp-Glcnac
pdb|4GZ5|B Chain B, Crystal Structure Of Human O-Glcnac Transferase With
Udp-Glcnac
pdb|4GZ5|C Chain C, Crystal Structure Of Human O-Glcnac Transferase With
Udp-Glcnac
pdb|4GZ5|D Chain D, Crystal Structure Of Human O-Glcnac Transferase With
Udp-Glcnac
pdb|4GZ6|A Chain A, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac
pdb|4GZ6|B Chain B, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac
pdb|4GZ6|C Chain C, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac
pdb|4GZ6|D Chain D, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac
Length = 723
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%)
Query: 20 LANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDP 79
LA+ + K +A+ Y +AI ++ A Y+N ++++ A+Q ++AI+I+P
Sbjct: 49 LASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINP 108
Query: 80 RYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAV 129
+ + + + G EA+ ++ KL P+ PDA + C + V
Sbjct: 109 AFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIV 158
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 2/131 (1%)
Query: 9 SSVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAI 68
S + A+ L LAN +A+ LY +A+E+ + A ++N A + + A+
Sbjct: 4 SCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEAL 63
Query: 69 QDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKA 128
+AI I P + Y G M + AL+ + + +++P DA + K
Sbjct: 64 MHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKD 123
Query: 129 VKKLKFEEAIA 139
+ EAIA
Sbjct: 124 SGNIP--EAIA 132
>pdb|2FBN|A Chain A, Plasmodium Falciparum Putative Fk506-Binding Protein
Pfl2275c, C-Terminal Tpr-Containing Domain
pdb|2FBN|B Chain B, Plasmodium Falciparum Putative Fk506-Binding Protein
Pfl2275c, C-Terminal Tpr-Containing Domain
Length = 198
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 19/144 (13%)
Query: 6 TENSSVSRAEELKALANEAFRAKKYSQAIDLYSQAIE-------------LNSQNAVYYA 52
T+ V A ++K NE F+ + ++AI Y +A++ L+ + + +
Sbjct: 30 TDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEIS 89
Query: 53 ---NRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVK 109
N A + K ++Y AI ASK ++ID K Y+ G A + G +EA ++ +
Sbjct: 90 CNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAA 149
Query: 110 KLSPNDPDAAQKVKECEKAVKKLK 133
L+PN+ D + C V KLK
Sbjct: 150 SLNPNNLDIRNSYELC---VNKLK 170
>pdb|2L6J|A Chain A, Tah1 Complexed By Meevd
Length = 111
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 11 VSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQ 69
+S+ E+ K N F+ Y +A+ Y Q I QN V Y+N+A A KL EY AIQ
Sbjct: 1 MSQFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQ 59
>pdb|4GCN|A Chain A, N-Terminal Domain Of Stress-Induced Protein-1 (Sti-1) From
C.Elegans
pdb|4GCN|B Chain B, N-Terminal Domain Of Stress-Induced Protein-1 (Sti-1) From
C.Elegans
Length = 127
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 22/124 (17%)
Query: 18 KALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEI 77
K L N A++ K + +A Y +AIEL+ N +Y N+A + + +++ +Q KA+E+
Sbjct: 12 KDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEV 71
Query: 78 DPR-------YPKGYYRRGAAY-------LAMGKFKEALKDFQQVKKLSPNDPDAAQKVK 123
K R G A+ LA+ F +L +F+ DP+ +KVK
Sbjct: 72 GRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFR--------DPELVKKVK 123
Query: 124 ECEK 127
E EK
Sbjct: 124 ELEK 127
>pdb|1ELR|A Chain A, Crystal Structure Of The Tpr2a Domain Of Hop In Complex
With The Hsp90 Peptide Meevd
Length = 131
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 18 KALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEI 77
K L N+A++ K + A+ Y +A EL+ N Y N+A + + +Y + KAIE+
Sbjct: 8 KELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEV 67
Query: 78 ------DPRY-PKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVK 130
D R K Y R G +Y K+K+A+ F PD +K+C++A K
Sbjct: 68 GRENREDYRQIAKAYARIGNSYFKEEKYKDAI-HFYNKSLAEHRTPDV---LKKCQQAEK 123
Query: 131 KLKFEEAI 138
LK +E +
Sbjct: 124 ILKEQERL 131
>pdb|3ESK|A Chain A, Structure Of Hop Tpr2a Domain In Complex With The
Non-Cognate Hsc70 Peptide Ligand
Length = 129
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 18 KALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEI 77
K L N+A++ K + A+ Y +A EL+ N Y N+A + + +Y + KAIE+
Sbjct: 8 KELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEV 67
Query: 78 ------DPRY-PKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVK 130
D R K Y R G +Y K+K+A+ F PD +K ++ EK +K
Sbjct: 68 GRENREDYRQIAKAYARIGNSYFKEEKYKDAI-HFYNKSLAEHRTPDVLKKCQQAEKILK 126
>pdb|3VTX|A Chain A, Crystal Structure Of Mama Protein
pdb|3VTX|B Chain B, Crystal Structure Of Mama Protein
pdb|3VTY|A Chain A, Crystal Structure Of Mama
pdb|3VTY|B Chain B, Crystal Structure Of Mama
pdb|3VTY|C Chain C, Crystal Structure Of Mama
pdb|3VTY|D Chain D, Crystal Structure Of Mama
Length = 184
Score = 43.1 bits (100), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 41/94 (43%)
Query: 12 SRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDA 71
+ AE L + F + AID +AI LN+ A Y + + E+ AI+
Sbjct: 71 TSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAY 130
Query: 72 SKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDF 105
K I I P + + Y G AY G EA+K F
Sbjct: 131 EKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYF 164
>pdb|3RKV|A Chain A, C-Terminal Domain Of Protein C56c10.10, A Putative
Peptidylprolyl Isomerase, From Caenorhabditis Elegans
Length = 162
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 21/147 (14%)
Query: 7 ENSSVSRAEELKALANEAFRAKKYSQAIDLYSQA------------------IELNSQNA 48
E+ + E L+ NE F K Y +AID Y A +EL+ +N
Sbjct: 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNI 63
Query: 49 VYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQV 108
YAN + + + + A + +S+ ++ + K +RR A +A K EA +D
Sbjct: 64 PLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDL--- 120
Query: 109 KKLSPNDPDAAQKVKECEKAVKKLKFE 135
K L N P AA V K V + + E
Sbjct: 121 KLLLRNHPAAASVVAREMKIVTERRAE 147
>pdb|1G5B|A Chain A, Bacteriophage Lambda SerTHR PROTEIN PHOSPHATASE
pdb|1G5B|B Chain B, Bacteriophage Lambda SerTHR PROTEIN PHOSPHATASE
pdb|1G5B|C Chain C, Bacteriophage Lambda SerTHR PROTEIN PHOSPHATASE
Length = 221
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 287 IDIPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSVEV--ILTL 344
ID ++ V GD+HG + +L+N + G ++++ + GD VDRG+ +VE ++T
Sbjct: 7 IDGSKYRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLELITF 66
Query: 345 FAFKCMCPSAIYLSRGNHESKSMNKI 370
F+ + RGNHE ++ +
Sbjct: 67 PWFRAV--------RGNHEQMMIDGL 84
>pdb|2Q7F|A Chain A, Crystal Structure Of Yrrb: A Tpr Protein With An Unusual
Peptide- Binding Site
pdb|2Q7F|B Chain B, Crystal Structure Of Yrrb: A Tpr Protein With An Unusual
Peptide- Binding Site
Length = 243
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%)
Query: 30 YSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRG 89
Y +A + +++AIE N ++A+ Y N A + + E A+ KA+E+D YY G
Sbjct: 39 YEKAAEAFTKAIEENKEDAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAG 98
Query: 90 AAYLAMGKFKEALKDFQQVKKLSPNDPD 117
Y+ +KEA F++ + + D
Sbjct: 99 NVYVVKEMYKEAKDMFEKALRAGMENGD 126
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 38/89 (42%)
Query: 30 YSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRG 89
Y +A D++ +A+ +N + KLE+ A+ +A+E++ + ++ G
Sbjct: 107 YKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFG 166
Query: 90 AAYLAMGKFKEALKDFQQVKKLSPNDPDA 118
G EAL F V + P DA
Sbjct: 167 MCLANEGMLDEALSQFAAVTEQDPGHADA 195
>pdb|2IF4|A Chain A, Crystal Structure Of A Multi-Domain Immunophilin From
Arabidopsis Thaliana
Length = 338
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 17/127 (13%)
Query: 6 TENSSVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVY--------------- 50
T + A+ K N F+ +K +A+ Y AI + ++
Sbjct: 171 TVEERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKN 230
Query: 51 --YANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQV 108
+ N A KL+ Y AI + + + + PK +RRG A +G+ A DF++
Sbjct: 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKA 290
Query: 109 KKLSPND 115
+K +P+D
Sbjct: 291 QKYAPDD 297
>pdb|2Y4T|A Chain A, Crystal Structure Of The Human Co-Chaperone P58(Ipk)
pdb|2Y4T|B Chain B, Crystal Structure Of The Human Co-Chaperone P58(Ipk)
pdb|2Y4T|C Chain C, Crystal Structure Of The Human Co-Chaperone P58(Ipk)
Length = 450
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 3 NMETEN---SSVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHT 59
++ TEN S++ E+ L + A + + A+ + A++ + N + Y RA
Sbjct: 12 DLGTENLYFQSMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFL 71
Query: 60 KLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPND 115
+ + +A+ D +K I++ + +RG L GK EA DF++V K +P++
Sbjct: 72 AMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSE 127
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 9/128 (7%)
Query: 11 VSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYY--ANRAFAH--TKLEEYGS 66
V + +L A E R +Y+ A Y ++ A Y + H +K E+
Sbjct: 254 VKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVE 313
Query: 67 AIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKE-C 125
AI+ S+ ++++P R AYL + EA++D++ ++ + ND Q+++E
Sbjct: 314 AIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNEND----QQIREGL 369
Query: 126 EKAVKKLK 133
EKA + LK
Sbjct: 370 EKAQRLLK 377
>pdb|3FWV|A Chain A, Crystal Structure Of A Redesigned Tpr Protein, T-Mod(Vmy),
In Complex With Meevf Peptide
pdb|3FWV|B Chain B, Crystal Structure Of A Redesigned Tpr Protein, T-Mod(Vmy),
In Complex With Meevf Peptide
Length = 128
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 11/123 (8%)
Query: 18 KALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEI 77
K L N+A++ K + A+ Y +A EL+ N Y N+A + + +Y + KAIE+
Sbjct: 8 KELGNDAYKKKDFDTALKHYDKAKELDPTNMTYIVNQAAVYFEKGDYNKCRELCEKAIEV 67
Query: 78 ------DPRY-PKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVK 130
D R Y R G +Y K+K+A+ + + S + + +K+C++A K
Sbjct: 68 GRENREDYRMIAYAYARIGNSYFKEEKYKDAIHFYNK----SLAEHRTPKVLKKCQQAEK 123
Query: 131 KLK 133
LK
Sbjct: 124 ILK 126
>pdb|4ABN|A Chain A, Crystal Structure Of Full Length Mouse Strap (Ttc5)
pdb|4ABN|B Chain B, Crystal Structure Of Full Length Mouse Strap (Ttc5)
Length = 474
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 22 NEAFRAKKYSQAIDLYSQAIELN---SQNAVYYANRAFAHTKLEEYGSAIQDASKAIEID 78
N K QA+ Y+QA +++ S N + NRA H E YG A++ S+A +D
Sbjct: 229 NTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALD 288
Query: 79 PRYPKGYYR 87
P +P+ R
Sbjct: 289 PAWPEPQQR 297
>pdb|2Y4U|A Chain A, Crystal Structure Of Human P58(Ipk) In Space Group P312
Length = 450
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 3 NMETEN---SSVSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHT 59
++ TEN S + E+ L + A + + A+ + A++ + N + Y RA
Sbjct: 12 DLGTENLYFQSXADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFL 71
Query: 60 KLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPND 115
+ +A+ D +K I++ + +RG L GK EA DF++V K +P++
Sbjct: 72 AXGKSKAALPDLTKVIQLKXDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSE 127
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Query: 11 VSRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYY--ANRAFAH--TKLEEYGS 66
V + +L A E R +Y+ A Y + A Y + H +K E+
Sbjct: 254 VKKLNKLIESAEELIRDGRYTDATSKYESVXKTEPSIAEYTVRSKERICHCFSKDEKPVE 313
Query: 67 AIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKE-C 125
AI+ S+ ++ +P R AYL + EA++D++ ++ + ND Q+++E
Sbjct: 314 AIRVCSEVLQXEPDNVNALKDRAEAYLIEEXYDEAIQDYETAQEHNEND----QQIREGL 369
Query: 126 EKAVKKLK 133
EKA + LK
Sbjct: 370 EKAQRLLK 377
>pdb|3QKY|A Chain A, Crystal Structure Of Rhodothermus Marinus Bamd
Length = 261
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 18/146 (12%)
Query: 26 RAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEI---DPRYP 82
RA +Y +A+ Y + E + +A +Y RA+ K EY A + + I+I DPR P
Sbjct: 33 RAIEYFKAVFTYGRTHEWAA-DAQFYLARAYYQNK--EYLLAASEYERFIQIYQIDPRVP 89
Query: 83 KGYYRRGAAY--------LAMGKFKEALKDFQQVKKLSPNDP---DAAQKVKECEKAVKK 131
+ Y R Y L ++A++ FQ PN DA QK++E + +
Sbjct: 90 QAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLAR 149
Query: 132 LKFEEAIAVPESERHSVADSIDYQSI 157
++E A E + A ++ Y+++
Sbjct: 150 KQYEAARLYERRELYEAA-AVTYEAV 174
>pdb|3IEG|A Chain A, Crystal Structure Of P58(Ipk) Tpr Domain At 2.5 A
pdb|3IEG|B Chain B, Crystal Structure Of P58(Ipk) Tpr Domain At 2.5 A
Length = 359
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Query: 20 LANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDP 79
L + A + + A+ + A++ + N + Y RA + +A+ D +K I +
Sbjct: 9 LGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAXGKSKAALPDLTKVIALKX 68
Query: 80 RYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKK 131
+ +RG L GK EA DF++V K +P++ Q+ KE E + K
Sbjct: 69 DFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSE----QEEKEAESQLVK 116
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Query: 21 ANEAFRAKKYSQAIDLYSQAIELNSQNAVYY--ANRAFAH--TKLEEYGSAIQDASKAIE 76
A E R +Y+ A Y + A Y + H +K E+ AI+ S+ ++
Sbjct: 241 AEELIRDGRYTDATSKYESVXKTEPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQ 300
Query: 77 IDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKE-CEKAVKKLK 133
+P R AYL + EA++D++ ++ + ND Q+++E EKA + LK
Sbjct: 301 XEPDNVNALKDRAEAYLIEEXYDEAIQDYEAAQEHNEND----QQIREGLEKAQRLLK 354
>pdb|1W3B|A Chain A, The Superhelical Tpr Domain Of O-Linked Glcnac Transferase
Reveals Structural Similarities To Importin Alpha.
pdb|1W3B|B Chain B, The Superhelical Tpr Domain Of O-Linked Glcnac Transferase
Reveals Structural Similarities To Importin Alpha
Length = 388
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%)
Query: 20 LANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDP 79
LAN ++A D Y+ A+ L +A N A + A++ KA+E+ P
Sbjct: 277 LANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFP 336
Query: 80 RYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDA 118
+ + + GK +EAL +++ ++SP DA
Sbjct: 337 EFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADA 375
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 34/86 (39%)
Query: 29 KYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRR 88
+ +A Y +AIE AV ++N E AI KA+ +DP + Y
Sbjct: 150 RLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINL 209
Query: 89 GAAYLAMGKFKEALKDFQQVKKLSPN 114
G F A+ + + LSPN
Sbjct: 210 GNVLKEARIFDRAVAAYLRALSLSPN 235
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 42/90 (46%)
Query: 25 FRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKG 84
F+ ++ ++ + AI+ N A Y+N + + + AI+ A+ + P + G
Sbjct: 44 FQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 103
Query: 85 YYRRGAAYLAMGKFKEALKDFQQVKKLSPN 114
Y AA +A G + A++ + + +P+
Sbjct: 104 YINLAAALVAAGDMEGAVQAYVSALQYNPD 133
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 73 KAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDA 118
KAIE P + + G + A G+ A+ F++ L PN DA
Sbjct: 160 KAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA 205
Score = 28.5 bits (62), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 12 SRAEELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDA 71
+ A+ L LAN +A+ LY +A+E+ + A ++N A + + A+
Sbjct: 303 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHY 362
Query: 72 SKAIEIDPRYPKGYYRRG 89
+AI I P + Y G
Sbjct: 363 KEAIRISPTFADAYSNMG 380
>pdb|4EQF|A Chain A, Trip8b-1a#206-567 Interacting With The Carboxy-Terminal
Seven Residues Of Hcn2
Length = 365
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/77 (19%), Positives = 41/77 (53%)
Query: 29 KYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRR 88
++++AID ++ A+ + ++ + + A++ ++A+EI P + + Y
Sbjct: 228 EFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNL 287
Query: 89 GAAYLAMGKFKEALKDF 105
G + + +G ++EA+ +F
Sbjct: 288 GISCINLGAYREAVSNF 304
>pdb|2C0L|A Chain A, Tpr Domain Of Human Pex5p In Complex With Human Mscp2
Length = 305
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/77 (19%), Positives = 37/77 (48%)
Query: 29 KYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRR 88
+Y +A+D ++ A+ + + + + + A+ +A+E+ P Y + Y
Sbjct: 169 EYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNL 228
Query: 89 GAAYLAMGKFKEALKDF 105
G + + +G +EA++ F
Sbjct: 229 GISCINLGAHREAVEHF 245
>pdb|2C0M|A Chain A, Apo Form Of The Tpr Domain Of The Pex5p Receptor
pdb|2C0M|B Chain B, Apo Form Of The Tpr Domain Of The Pex5p Receptor
pdb|2C0M|C Chain C, Apo Form Of The Tpr Domain Of The Pex5p Receptor
pdb|2C0M|F Chain F, Apo Form Of The Tpr Domain Of The Pex5p Receptor
Length = 319
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/77 (19%), Positives = 37/77 (48%)
Query: 29 KYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRR 88
+Y +A+D ++ A+ + + + + + A+ +A+E+ P Y + Y
Sbjct: 183 EYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNL 242
Query: 89 GAAYLAMGKFKEALKDF 105
G + + +G +EA++ F
Sbjct: 243 GISCINLGAHREAVEHF 259
>pdb|2J9Q|A Chain A, A Novel Conformation For The Tpr Domain Of Pex5p
pdb|2J9Q|B Chain B, A Novel Conformation For The Tpr Domain Of Pex5p
Length = 328
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/77 (19%), Positives = 37/77 (48%)
Query: 29 KYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRR 88
+Y +A+D ++ A+ + + + + + A+ +A+E+ P Y + Y
Sbjct: 192 EYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNL 251
Query: 89 GAAYLAMGKFKEALKDF 105
G + + +G +EA++ F
Sbjct: 252 GISCINLGAHREAVEHF 268
>pdb|2Z72|A Chain A, New Structure Of Cold-Active Protein Tyrosine Phosphatase
At 1.1 Angstrom
Length = 342
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 10/81 (12%)
Query: 293 KHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLF-------NGDFVDRGSFSVEVILTLF 345
K DVHGQ+ LL + + + + + F GD DRG EV+ ++
Sbjct: 71 KKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMY 130
Query: 346 AFKCMCPSA---IYLSRGNHE 363
A ++L GNHE
Sbjct: 131 QLDQQARDAGGMVHLLMGNHE 151
>pdb|1V73|A Chain A, Crystal Structure Of Cold-Active Protein-Tyrosine
Phosphatase Of A Psychrophile Shewanella Sp
Length = 342
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 10/81 (12%)
Query: 293 KHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLF-------NGDFVDRGSFSVEVILTLF 345
K DVHGQ+ LL + + + + + F GD DRG EV+ ++
Sbjct: 71 KKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMY 130
Query: 346 AFKCMCPSA---IYLSRGNHE 363
A ++L GNHE
Sbjct: 131 QLDQQARDAGGMVHLLMGNHE 151
>pdb|2ZBM|A Chain A, Crystal Structure Of I115m Mutant Cold-Active Protein
Tyrosine Phosphatase
Length = 336
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 10/81 (12%)
Query: 293 KHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLF-------NGDFVDRGSFSVEVILTLF 345
K DVHGQ+ LL + + + + + F GD DRG EV+ ++
Sbjct: 71 KKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDMFDRGHQVNEVLWFMY 130
Query: 346 AFKCMCPSA---IYLSRGNHE 363
A ++L GNHE
Sbjct: 131 QLDQQARDAGGMVHLLMGNHE 151
>pdb|2KC7|A Chain A, Solution Nmr Structure Of Bacteroides Fragilis Protein
Bf1650. Northeast Structural Genomics Consortium Target
Bfr218
Length = 99
Score = 32.3 bits (72), Expect = 0.75, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 66 SAIQDASKAIEIDP-RYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDP 116
+A+Q + ++ +P + YY G AY +G +++AL ++Q +L+P+ P
Sbjct: 18 NALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSP 69
>pdb|3R9A|B Chain B, Human Alanine-Glyoxylate Aminotransferase In Complex With
The Tpr Domain Of Human Pex5p
pdb|3R9A|D Chain D, Human Alanine-Glyoxylate Aminotransferase In Complex With
The Tpr Domain Of Human Pex5p
Length = 328
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/77 (19%), Positives = 37/77 (48%)
Query: 29 KYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRR 88
+Y +A+D ++ A+ + + + + + A+ +A+E+ P Y + Y
Sbjct: 192 EYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNL 251
Query: 89 GAAYLAMGKFKEALKDF 105
G + + +G +EA++ F
Sbjct: 252 GISCINLGAHREAVEHF 268
>pdb|1FCH|A Chain A, Crystal Structure Of The Pts1 Complexed To The Tpr Region
Of Human Pex5
pdb|1FCH|B Chain B, Crystal Structure Of The Pts1 Complexed To The Tpr Region
Of Human Pex5
Length = 368
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/77 (19%), Positives = 37/77 (48%)
Query: 29 KYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRR 88
+Y +A+D ++ A+ + + + + + A+ +A+E+ P Y + Y
Sbjct: 232 EYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNL 291
Query: 89 GAAYLAMGKFKEALKDF 105
G + + +G +EA++ F
Sbjct: 292 GISCINLGAHREAVEHF 308
>pdb|3CVQ|A Chain A, Structure Of Peroxisomal Targeting Signal 1 (pts1) Binding
Domain Of Trypanosoma Brucei Peroxin 5 (tbpex5)complexed
To Pts1 Peptide (7- Skl)
Length = 327
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 40/86 (46%)
Query: 28 KKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYR 87
+Y + L A+E+N +A +A+ + Y SA + +A+E+ P + + +
Sbjct: 152 NEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNK 211
Query: 88 RGAAYLAMGKFKEALKDFQQVKKLSP 113
GA + +EAL + + ++P
Sbjct: 212 LGATLANGNRPQEALDAYNRALDINP 237
>pdb|3CV0|A Chain A, Structure Of Peroxisomal Targeting Signal 1 (Pts1) Binding
Domain Of Trypanosoma Brucei Peroxin 5 (Tbpex5)complexed
To T. Brucei Phosphoglucoisomerase (Pgi) Pts1 Peptide
pdb|3CVL|A Chain A, Structure Of Peroxisomal Targeting Signal 1 (Pts1) Binding
Domain Of Trypanosoma Brucei Peroxin 5 (Tbpex5)complexed
To T. Brucei Phosphofructokinase (Pfk) Pts1 Peptide
pdb|3CVN|A Chain A, Structure Of Peroxisomal Targeting Signal 1 (Pts1) Binding
Domain Of Trypanosoma Brucei Peroxin 5 (Tbpex5)complexed
To T. Brucei Glyceraldehyde-3-Phosphate Dehydrogenase
(Gapdh) Pts1 Peptide
pdb|3CVP|A Chain A, Structure Of Peroxisomal Targeting Signal 1 (Pts1) Binding
Domain Of Trypanosoma Brucei Peroxin 5 (Tbpex5)complexed
To Pts1 Peptide (10-Skl)
Length = 327
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 40/86 (46%)
Query: 28 KKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYR 87
+Y + L A+E+N +A +A+ + Y SA + +A+E+ P + + +
Sbjct: 152 NEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNK 211
Query: 88 RGAAYLAMGKFKEALKDFQQVKKLSP 113
GA + +EAL + + ++P
Sbjct: 212 LGATLANGNRPQEALDAYNRALDINP 237
>pdb|1XNF|A Chain A, Crystal Structure Of E.Coli Tpr-Protein Nlpi
pdb|1XNF|B Chain B, Crystal Structure Of E.Coli Tpr-Protein Nlpi
Length = 275
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 59 TKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDP-- 116
T+ + +A + +E+DP Y + RG A G+ K A D + PNDP
Sbjct: 88 TQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFR 147
Query: 117 -----DAAQKVKECE-KAVKKLKFEEA 137
A QK+ E + K V K FE++
Sbjct: 148 SLWLYLAEQKLDEKQAKEVLKQHFEKS 174
>pdb|3HYM|B Chain B, Insights Into Anaphase Promoting Complex Tpr Subdomain
Assembly From A Cdc26-Apc6 Structure
pdb|3HYM|D Chain D, Insights Into Anaphase Promoting Complex Tpr Subdomain
Assembly From A Cdc26-Apc6 Structure
pdb|3HYM|F Chain F, Insights Into Anaphase Promoting Complex Tpr Subdomain
Assembly From A Cdc26-Apc6 Structure
pdb|3HYM|H Chain H, Insights Into Anaphase Promoting Complex Tpr Subdomain
Assembly From A Cdc26-Apc6 Structure
pdb|3HYM|J Chain J, Insights Into Anaphase Promoting Complex Tpr Subdomain
Assembly From A Cdc26-Apc6 Structure
pdb|3HYM|L Chain L, Insights Into Anaphase Promoting Complex Tpr Subdomain
Assembly From A Cdc26-Apc6 Structure
Length = 330
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 17 LKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAI 68
L L + + KKY++A+D + QA+ L QNA Y+ + H+ + +A+
Sbjct: 239 LNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLXGNFENAV 290
>pdb|4APO|A Chain A, Aip Tpr Domain In Complex With Human Tomm20 Peptide
pdb|4APO|B Chain B, Aip Tpr Domain In Complex With Human Tomm20 Peptide
Length = 165
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%)
Query: 41 IELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKE 100
I+L+ Q N +EEY + S + K Y++RG A+ A+ +E
Sbjct: 59 IQLDQQITPLLLNYCQCKLVVEEYYEVLDHCSSILNKYDDNVKAYFKRGKAHAAVWNAQE 118
Query: 101 ALKDFQQVKKLSP 113
A DF +V +L P
Sbjct: 119 AQADFAKVLELDP 131
>pdb|4AIF|A Chain A, Aip Tpr Domain In Complex With Human Hsp90 Peptide
pdb|4AIF|B Chain B, Aip Tpr Domain In Complex With Human Hsp90 Peptide
Length = 144
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%)
Query: 41 IELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKE 100
I+L+ Q N +EEY + S + K Y++RG A+ A+ +E
Sbjct: 53 IQLDQQITPLLLNYCQCKLVVEEYYEVLDHCSSILNKYDDNVKAYFKRGKAHAAVWNAQE 112
Query: 101 ALKDFQQVKKLSP 113
A DF +V +L P
Sbjct: 113 AQADFAKVLELDP 125
>pdb|3FJO|A Chain A, Structure Of Chimeric Yh Cpr
Length = 637
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 263 HKRYAFQIVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIF 312
HK Y ++ Q RE L L I G H VCGD D+ N F
Sbjct: 561 HKVYVQHLLKQDREHLWKL-------IEGGAHIYVCGDARNMARDVQNTF 603
>pdb|2E2E|A Chain A, Tpr Domain Of Nrfg Mediates The Complex Formation Between
Heme Lyase And Formate-Dependent Nitrite Reductase In
Escherichia Coli O157:h7
pdb|2E2E|B Chain B, Tpr Domain Of Nrfg Mediates The Complex Formation Between
Heme Lyase And Formate-Dependent Nitrite Reductase In
Escherichia Coli O157:h7
Length = 177
Score = 30.8 bits (68), Expect = 2.2, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 17 LKALANEAFRAKKYSQAIDLYSQAIELNS 45
L LA++AF Y+QAI+L+ + ++LNS
Sbjct: 118 LMLLASDAFMQANYAQAIELWQKVMDLNS 146
>pdb|3QFC|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e
Mutant)
pdb|3QFC|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e
Mutant)
Length = 618
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 263 HKRYAFQIVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIF 312
HK Y ++ Q RE L L I G H VCGD D+ N F
Sbjct: 542 HKVYVQHLLKQDREHLWKL-------IEGGAHIYVCGDARNMARDVQNTF 584
>pdb|2KCK|A Chain A, Nmr Solution Structure Of The Northeast Structural
Genomics Consortium (Nesg) Target Mrr121a
Length = 112
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 27/44 (61%)
Query: 25 FRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAI 68
+ A Y+++IDL+ +AI+L+ + + Y+ + A LE Y A+
Sbjct: 17 YDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAV 60
>pdb|3QFR|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
(R457h Mutant)
pdb|3QFR|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
(R457h Mutant)
Length = 618
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 263 HKRYAFQIVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIF 312
HK Y ++ Q RE L L I G H VCGD D+ N F
Sbjct: 542 HKVYVQHLLKQDREHLWKL-------IEGGAHIYVCGDARNMARDVQNTF 584
>pdb|3QE2|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
pdb|3QE2|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
Length = 618
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 263 HKRYAFQIVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIF 312
HK Y ++ Q RE L L I G H VCGD D+ N F
Sbjct: 542 HKVYVQHLLKQDREHLWKL-------IEGGAHIYVCGDARNMARDVQNTF 584
>pdb|3QFS|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase
(FadNADPH Domain)
Length = 458
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 263 HKRYAFQIVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIF 312
HK Y ++ Q RE L L I G H VCGD D+ N F
Sbjct: 382 HKVYVQHLLKQDREHLWKL-------IEGGAHIYVCGDARNMARDVQNTF 424
>pdb|3QFT|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase
(FadNADPH DOMAIN And R457h Mutant)
Length = 458
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 263 HKRYAFQIVLQTREMLRALPSLVDIDIPDGKHFTVCGDVHGQFYDLLNIF 312
HK Y ++ Q RE L L I G H VCGD D+ N F
Sbjct: 382 HKVYVQHLLKQDREHLWKL-------IEGGAHIYVCGDARNMARDVQNTF 424
>pdb|2PL2|A Chain A, Crystal Structure Of Ttc0263: A Thermophilic Tpr Protein
In Thermus Thermophilus Hb27
pdb|2PL2|B Chain B, Crystal Structure Of Ttc0263: A Thermophilic Tpr Protein
In Thermus Thermophilus Hb27
Length = 217
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 15/99 (15%)
Query: 29 KYSQAIDLYSQAIELNSQN--AVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYY 86
+Y A+ L+ +A++ N Q+ A+Y+ R KL A+++ + PRY GY
Sbjct: 20 RYDAALTLFERALKENPQDPEALYWLART--QLKLGLVNPALENGKTLVARTPRYLGGYM 77
Query: 87 RRGAAYLAM-----------GKFKEALKDFQQVKKLSPN 114
AY+A+ G ++AL + ++++P
Sbjct: 78 VLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR 116
>pdb|3N58|A Chain A, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Brucella Melitensis In Ternary Complex With Nad And
Adenosine, Orthorhombic Form
pdb|3N58|B Chain B, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Brucella Melitensis In Ternary Complex With Nad And
Adenosine, Orthorhombic Form
pdb|3N58|C Chain C, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Brucella Melitensis In Ternary Complex With Nad And
Adenosine, Orthorhombic Form
pdb|3N58|D Chain D, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase
From Brucella Melitensis In Ternary Complex With Nad And
Adenosine, Orthorhombic Form
Length = 464
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 10/108 (9%)
Query: 242 DVITLDFVKKMMDDFKNQKCLHKRYAFQI-VLQTREMLRALPSLVDIDIPDGKHFTVCGD 300
DVIT+D ++KM D H Q+ L+ + P + I+ PDGK + +
Sbjct: 314 DVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRNLKWTNVKPQVDLIEFPDGKRLILLSE 373
Query: 301 VHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSVEVILTLFAFK 348
LLN+ G PS ++ + F ++ +E+ A+K
Sbjct: 374 GR-----LLNLGNATGHPS----FVMSASFTNQVLGQIELFTRTDAYK 412
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
Length = 381
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 211 WGSCSGSDVFTKSRKLELEVEPQYSGARIEGDVI----TLDFVKKMMDDFKNQK 260
WGSC+ V S+ L + E G I G ++D + K++ D+KN+K
Sbjct: 293 WGSCTFIGVAAGSKGLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKK 346
>pdb|2WB7|A Chain A, Pt26-6p
pdb|2WB7|B Chain B, Pt26-6p
Length = 526
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 11/101 (10%)
Query: 28 KKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYR 87
+K +A L ++A N++NA+ YA A ++EY +AI D KA + D Y+
Sbjct: 424 EKIDEAEQLLAKAKGXNNENAIEYAQGA-----IDEYKAAINDLQKAAQQDD------YQ 472
Query: 88 RGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKA 128
YL K E D+ + D Q + EKA
Sbjct: 473 XFLNYLNAAKKHEXAGDYYVNAARKALNGDLEQAKIDAEKA 513
>pdb|4AM9|A Chain A, Crystal Structure Of The Yersinia Enterocolitica Type Iii
Secretion Chaperone Sycd In Complex With A Peptide Of
The Translocator Yopd
Length = 148
Score = 28.9 bits (63), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 54/132 (40%), Gaps = 6/132 (4%)
Query: 15 EELKALANEAFRAKKYSQAIDLYSQAIELNSQNAVYYANRAFAHTKLEEYGSAIQDASKA 74
E+L +LA +++ KY A ++ L+ ++ ++ + +Y AI S
Sbjct: 22 EQLYSLAFNQYQSGKYEDAHKVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYG 81
Query: 75 IEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPNDPDAAQKVKECEKAVKKLKF 134
+D + P+ + L G+ EA ++L N P+ KE V +
Sbjct: 82 AVMDIKEPRFPFHAAECLLQKGELAEAESGLFLAQELIANKPE----FKELSTRVSSML- 136
Query: 135 EEAIAVPESERH 146
EAI + + +H
Sbjct: 137 -EAIKLKKEMKH 147
>pdb|3ASG|A Chain A, Mama D159k Mutant 2
pdb|3ASG|B Chain B, Mama D159k Mutant 2
pdb|3ASH|A Chain A, Mama D159k Mutant 1
pdb|3ASH|B Chain B, Mama D159k Mutant 1
Length = 186
Score = 28.9 bits (63), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 55 AFAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPN 114
+ ++++Y A+ K E +P +R G A +G+F EA+ F+ L PN
Sbjct: 83 GLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALKNLGRFDEAIDSFKIALGLRPN 142
Query: 115 D 115
+
Sbjct: 143 E 143
>pdb|3AS8|A Chain A, Mama Msr-1 P41212
pdb|3ASF|A Chain A, Mama Msr-1 C2
pdb|3ASF|B Chain B, Mama Msr-1 C2
Length = 186
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 56 FAHTKLEEYGSAIQDASKAIEIDPRYPKGYYRRGAAYLAMGKFKEALKDFQQVKKLSPND 115
+ ++++Y A+ K E +P +R G A +G+F EA+ F+ L PN+
Sbjct: 84 LTYVQVQKYDLAVPLLVKVAEANPVNFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNE 143
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,463,123
Number of Sequences: 62578
Number of extensions: 644391
Number of successful extensions: 1729
Number of sequences better than 100.0: 116
Number of HSP's better than 100.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1432
Number of HSP's gapped (non-prelim): 185
length of query: 556
length of database: 14,973,337
effective HSP length: 104
effective length of query: 452
effective length of database: 8,465,225
effective search space: 3826281700
effective search space used: 3826281700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)