BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008731
(556 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3QE2|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
pdb|3QE2|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
Length = 618
Score = 255 bits (651), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 169/554 (30%), Positives = 274/554 (49%), Gaps = 54/554 (9%)
Query: 18 LEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEGALDPWM 77
L GV++AVFGLG+ Y+ FN + K +D RL LGA + E GLGDD E W
Sbjct: 104 LSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLGAQRIFELGLGDDD--GNLEEDFITWR 161
Query: 78 RSLWRRLHQIDPSFFPQGPDHVIEEMKLIDQPKVHITYHSIDNAASRLSNASDLEGIRMQ 137
W + + G + I + +L+ VH +D++ ++
Sbjct: 162 EQFWLAVCE-HFGVEATGEESSIRQYELV----VH----------------TDIDAAKVY 200
Query: 138 LETARSMSAGKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEY 191
+ G+L +Y N+ FL + G+ + + H E + + I Y
Sbjct: 201 MG-----EMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQGTERHLMHLELDISDSKIRY 255
Query: 192 EVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTF 251
E GD + + P+ D A V+ + D D ++++ + + ++ K+ P RT
Sbjct: 256 ESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEESN----KKHPFPCPTSYRTA 311
Query: 252 VELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLE 309
+ +D+T+ PR ++ +A+ E+E L+ AS EG++ + + RR +L
Sbjct: 312 LTYYLDITNP-PRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILA 370
Query: 310 VLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGL 369
+L+D PS++ PID L +L+P L+ R +SI+SS HPN VH+ VV + T R G+
Sbjct: 371 ILQDCPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGV 430
Query: 370 CSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA- 423
+ WL +P + G +P + +K P + P+I++GPGTG APF GF++ERA
Sbjct: 431 ATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAW 490
Query: 424 IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKV 482
++ + ++GCR D D+LYRE L+ DG ++ VAFSR+Q KV
Sbjct: 491 LRQQGKEVGETLLYYGCRRSDEDYLYRE-ELAQFHRDGALTQ-----LNVAFSREQSHKV 544
Query: 483 YVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLK 542
YVQH + + + +W L+ A IYV G A M DV +TF +IV++ G A +++K
Sbjct: 545 YVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIK 604
Query: 543 ALQRAGRYHVEAWS 556
L GRY ++ WS
Sbjct: 605 KLMTKGRYSLDVWS 618
>pdb|3QFC|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e
Mutant)
pdb|3QFC|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e
Mutant)
Length = 618
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 169/554 (30%), Positives = 273/554 (49%), Gaps = 54/554 (9%)
Query: 18 LEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEGALDPWM 77
L GV++AVFGLG+ Y+ FN + K +D RL LGA + E GLGDD E W
Sbjct: 104 LSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLGAQRIFELGLGDDD--GNLEEDFITWR 161
Query: 78 RSLWRRLHQIDPSFFPQGPDHVIEEMKLIDQPKVHITYHSIDNAASRLSNASDLEGIRMQ 137
W + + G + I + +L+ VH +D++ ++
Sbjct: 162 EQFWLAVCE-HFGVEATGEESSIRQYELV----VH----------------TDIDAAKVY 200
Query: 138 LETARSMSAGKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEY 191
+ G+L +Y N+ FL + G+ + + H E + + I Y
Sbjct: 201 MG-----EMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQGTERHLMHLELDISDSKIRY 255
Query: 192 EVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTF 251
E GD + + P+ D A V+ + D D ++++ + + ++ K+ P RT
Sbjct: 256 ESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEESN----KKHPFPCPTSYRTA 311
Query: 252 VELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLE 309
+ +D+T+ PR ++ +A+ E+E L+ AS EG++ + + RR +L
Sbjct: 312 LTYYLDITNP-PRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILA 370
Query: 310 VLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGL 369
+L+D PS++ PID L +L+P L+ R +SI+SS HPN VH+ VV + T R G
Sbjct: 371 ILQDCPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGE 430
Query: 370 CSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA- 423
+ WL +P + G +P + +K P + P+I++GPGTG APF GF++ERA
Sbjct: 431 ATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAW 490
Query: 424 IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKV 482
++ + ++GCR D D+LYRE L+ DG ++ VAFSR+Q KV
Sbjct: 491 LRQQGKEVGETLLYYGCRRSDEDYLYRE-ELAQFHRDGALTQ-----LNVAFSREQSHKV 544
Query: 483 YVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLK 542
YVQH + + + +W L+ A IYV G A M DV +TF +IV++ G A +++K
Sbjct: 545 YVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIK 604
Query: 543 ALQRAGRYHVEAWS 556
L GRY ++ WS
Sbjct: 605 KLMTKGRYSLDVWS 618
>pdb|3QFR|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
(R457h Mutant)
pdb|3QFR|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
(R457h Mutant)
Length = 618
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 169/554 (30%), Positives = 268/554 (48%), Gaps = 54/554 (9%)
Query: 18 LEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEGALDPWM 77
L GV++AVFGLG+ Y+ FN + K +D RL LGA + E GLGDD E W
Sbjct: 104 LSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLGAQRIFELGLGDDD--GNLEEDFITWR 161
Query: 78 RSLWRRLHQIDPSFFPQGPDHVIEEMKLIDQPKVHITYHSIDNAASRLSNASDLEGIRMQ 137
W P+ E I Q ++ + + ID A +
Sbjct: 162 EQFW-------PAVCEHFGVEATGEESSIRQYEL-VVHTDIDAAKVYMG----------- 202
Query: 138 LETARSMSAGKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEY 191
G+L +Y N+ FL + G+ + + H E + + I Y
Sbjct: 203 -------EMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQGTERHLMHLELDISDSKIRY 255
Query: 192 EVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTF 251
E GD + + P+ D A V+ + D D ++++ + + ++ K+ P RT
Sbjct: 256 ESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEESN----KKHPFPCPTSYRTA 311
Query: 252 VELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLE 309
+ +D+T+ PR ++ +A+ E+E L+ AS EG++ + + RR +L
Sbjct: 312 LTYYLDITNP-PRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILA 370
Query: 310 VLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGL 369
+L+D PS++ PID L +L+P L+ +SI+SS HPN VH+ VV + T R G+
Sbjct: 371 ILQDCPSLRPPIDHLCELLPRLQAHYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGV 430
Query: 370 CSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA- 423
+ WL +P + G +P + +K P + P+I++GPGTG APF GF++ERA
Sbjct: 431 ATNWLRAKEPAGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAW 490
Query: 424 IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKV 482
++ + ++GCR D D+LYRE L+ DG ++ VAFSR+Q KV
Sbjct: 491 LRQQGKEVGETLLYYGCRRSDEDYLYRE-ELAQFHRDGALTQ-----LNVAFSREQSHKV 544
Query: 483 YVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLK 542
YVQH + + + +W L+ A IYV G A M DV +TF +IV++ G A +++K
Sbjct: 545 YVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIK 604
Query: 543 ALQRAGRYHVEAWS 556
L GRY ++ WS
Sbjct: 605 KLMTKGRYSLDVWS 618
>pdb|1AMO|A Chain A, Three-Dimensional Structure Of Nadph-Cytochrome P450
Reductase: Prototype For Fmn-And Fad-Containing Enzymes
pdb|1AMO|B Chain B, Three-Dimensional Structure Of Nadph-Cytochrome P450
Reductase: Prototype For Fmn-And Fad-Containing Enzymes
Length = 615
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 169/558 (30%), Positives = 269/558 (48%), Gaps = 61/558 (10%)
Query: 18 LEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEGALDPWM 77
L GV++AVFGLG+ Y+ FN + K +D RL LGA + E GLGDD E W
Sbjct: 100 LTGVKFAVFGLGNKTYEHFNAMGKYVDQRLEQLGAQRIFELGLGDDD--GNLEEDFITWR 157
Query: 78 RSLWRRLHQIDPSFF---PQGPDHVIEEMKLIDQPKVHITYHSIDNAASRLSNASDLEGI 134
W + + FF G + I + +L+ VH
Sbjct: 158 EQFWPAVCE----FFGVEATGEESSIRQYELV----VHED-------------------- 189
Query: 135 RMQLETARSMSAGKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAA 188
M + + G+L +Y N+ FL + G+ + + H E + +
Sbjct: 190 -MDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQGTERHLMHLELDISDSK 248
Query: 189 IEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKL 248
I YE GD + + P+ D A V+ + D D ++++ + + ++ K+ P
Sbjct: 249 IRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEESN----KKHPFPCPTTY 304
Query: 249 RTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRT 306
RT + +D+T+ PR ++ +A+ E+E L AS EG++ + + RR
Sbjct: 305 RTALTYYLDITNP-PRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVVEARRH 363
Query: 307 VLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKR 366
+L +L+D+PS++ PID L +L+P L+ R +SI+SS HPN VH+ V + R
Sbjct: 364 ILAILQDYPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEAKSGRVN 423
Query: 367 TGLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEE 421
G+ + WL +P + G +P + +K P + P+I++GPGTG APF GF++E
Sbjct: 424 KGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPFMGFIQE 483
Query: 422 RA-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP 479
RA ++ + ++GCR D D+LYRE L+ DG ++ VAFSR+Q
Sbjct: 484 RAWLREQGKEVGETLLYYGCRRSDEDYLYRE-ELARFHKDGALTQLN-----VAFSREQA 537
Query: 480 QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAA 538
KVYVQH + + +W L+ A IYV G A M DV +TF +IV++ G A
Sbjct: 538 HKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPMEHTQAV 597
Query: 539 NWLKALQRAGRYHVEAWS 556
+++K L GRY ++ WS
Sbjct: 598 DYVKKLMTKGRYSLDVWS 615
>pdb|1JA1|A Chain A, Cypor-Triple Mutant
pdb|1JA1|B Chain B, Cypor-Triple Mutant
Length = 622
Score = 248 bits (633), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 169/558 (30%), Positives = 269/558 (48%), Gaps = 61/558 (10%)
Query: 18 LEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEGALDPWM 77
L GV++AVFGLG+ Y+ FN + K +D RL LGA + E GLGDD E W
Sbjct: 107 LTGVKFAVFGLGNKTYEHFNAMGKYVDQRLEQLGAQRIFELGLGDDD--GNLEEDFITWR 164
Query: 78 RSLWRRLHQIDPSFF---PQGPDHVIEEMKLIDQPKVHITYHSIDNAASRLSNASDLEGI 134
W + + FF G + I + +L+ VH
Sbjct: 165 EQFWPAVCE----FFGVEATGEESSIRQYELV----VHED-------------------- 196
Query: 135 RMQLETARSMSAGKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAA 188
M + + G+L +Y N+ FL + G+ + + H E + +
Sbjct: 197 -MDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQGTERHLMHLELDISDSK 255
Query: 189 IEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKL 248
I YE GD + + P+ D A V+ + D D ++++ + + ++ K+ P
Sbjct: 256 IRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEESN----KKHPFPCPTTY 311
Query: 249 RTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRT 306
RT + +D+T+ PR ++ +A+ E+E L AS EG++ + + RR
Sbjct: 312 RTALTYYLDITNP-PRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVVEARRH 370
Query: 307 VLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKR 366
+L +L+D+PS++ PID L +L+P L+ R ++I+SS HPN VH+ V + R
Sbjct: 371 ILAILQDYPSLRPPIDHLCELLPRLQARYYAIASSSKVHPNSVHICAVAVEYEAKSGRVN 430
Query: 367 TGLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEE 421
G+ + WL +P + G +P + +K P + P+I++GPGTG APF GF++E
Sbjct: 431 KGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPFMGFIQE 490
Query: 422 RA-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP 479
RA ++ + ++GCR D D+LYRE L+ DG ++ VAFSR+Q
Sbjct: 491 RAWLREQGKEVGETLLYYGCRRSDEDYLYRE-ELARFHKDGALTQ-----LNVAFSREQA 544
Query: 480 QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAA 538
KVYVQH + + +W L+ A IYVAG A M DV +TF +IV++ G A
Sbjct: 545 HKVYVQHLLKRDREHLWKLIHEGGAHIYVAGDARNMAKDVQNTFYDIVAEFGPMEHTQAV 604
Query: 539 NWLKALQRAGRYHVEAWS 556
+++K L GRY + WS
Sbjct: 605 DYVKKLMTKGRYSLNVWS 622
>pdb|3OJW|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive
pdb|3OJX|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive
Length = 622
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 169/558 (30%), Positives = 269/558 (48%), Gaps = 61/558 (10%)
Query: 18 LEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEGALDPWM 77
L GV++AVFGLG+ Y+ FN + K +D RL LGA + E GLGDD E W
Sbjct: 107 LTGVKFAVFGLGNKTYEHFNAMGKYVDQRLEQLGAQRIFELGLGDDD--GNLEEDFITWR 164
Query: 78 RSLWRRLHQIDPSFF---PQGPDHVIEEMKLIDQPKVHITYHSIDNAASRLSNASDLEGI 134
W + + FF G + I + +L+ VH
Sbjct: 165 EQFWPAVAE----FFGVEATGEESSIRQYELV----VHED-------------------- 196
Query: 135 RMQLETARSMSAGKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAA 188
M + + G+L +Y N+ FL + G+ + + H E + +
Sbjct: 197 -MDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQGTERHLMHLELDISDSK 255
Query: 189 IEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKL 248
I YE GD + + P+ D A V+ + D D ++++ + + ++ K+ P
Sbjct: 256 IRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEESN----KKHPFPTPTTY 311
Query: 249 RTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRT 306
RT + +D+T+ PR ++ +A+ E+E L AS EG++ + + RR
Sbjct: 312 RTALTYYLDITNP-PRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVVEARRH 370
Query: 307 VLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKR 366
+L +L+D+PS++ PID L++L+P L+ R +SI+SS HPN VH+T V + R
Sbjct: 371 ILAILQDYPSLRPPIDHLLELLPRLQARYYSIASSSKVHPNSVHITAVAVEYEAKSGRVN 430
Query: 367 TGLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEE 421
G+ + WL +P + G +P + K P + P+I++GPGTG APF GF++E
Sbjct: 431 KGVATSWLRAKEPAGENGGRALVPMFVCKSQFRLPFKSTTPVIMVGPGTGIAPFMGFIQE 490
Query: 422 RA-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP 479
RA ++ + ++G R D D+LYRE L+ DG ++ VAFSR+Q
Sbjct: 491 RAWLREQGKEVGETLLYYGARRSDEDYLYRE-ELARFHKDGALTQ-----LNVAFSREQA 544
Query: 480 QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAA 538
KVYVQH + + +W L+ A IYV G A M DV +TF +IV++ G A
Sbjct: 545 HKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPMEHTQAV 604
Query: 539 NWLKALQRAGRYHVEAWS 556
+++K L GRY ++ WS
Sbjct: 605 DYVKKLMTKGRYSLDVWS 622
>pdb|3ES9|A Chain A, Nadph-Cytochrome P450 Reductase In An Open Conformation
pdb|3ES9|B Chain B, Nadph-Cytochrome P450 Reductase In An Open Conformation
pdb|3ES9|C Chain C, Nadph-Cytochrome P450 Reductase In An Open Conformation
Length = 618
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 169/555 (30%), Positives = 272/555 (49%), Gaps = 59/555 (10%)
Query: 18 LEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEGALDPWM 77
L GV++AVFGLG+ Y+ FN + K +D RL LGA + E GLGDD +G L+
Sbjct: 107 LTGVKFAVFGLGNKTYEHFNAMGKYVDQRLEQLGAQRIFELGLGDD------DGNLEEDF 160
Query: 78 RSLWRRLHQIDPSFFPQGPDHVIEEMKLIDQPKVHITYHSIDNAASRLSNASDLEGIRMQ 137
+ WR F+P + E I Q ++ + + +D A
Sbjct: 161 IT-WRE------QFWPAVCEFFGVEASSIRQYEL-VVHEDMDVA---------------- 196
Query: 138 LETARSMSAGKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEY 191
+ G+L +Y N+ FL + G+ + + H E + + I Y
Sbjct: 197 --KVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQGTERHLMHLELDISDSKIRY 254
Query: 192 EVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTF 251
E GD + + P+ D A V+ + D D ++++ + + ++ K+ P RT
Sbjct: 255 ESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEESN----KKHPFPCPTTYRTA 310
Query: 252 VELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLE 309
+ +D+T+ PR ++ +A+ E+E L AS EG++ + + RR +L
Sbjct: 311 LTYYLDITNP-PRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVVEARRHILA 369
Query: 310 VLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGL 369
+L+D+PS++ PID L +L+P L+ R +SI+SS HPN VH+ V + R G+
Sbjct: 370 ILQDYPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEAKSGRVNKGV 429
Query: 370 CSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA- 423
+ WL +P + G +P + +K P + P+I++GPGTG APF GF++ERA
Sbjct: 430 ATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPFMGFIQERAW 489
Query: 424 IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKV 482
++ + ++GCR D D+LYRE L+ DG ++ VAFSR+Q KV
Sbjct: 490 LREQGKEVGETLLYYGCRRSDEDYLYRE-ELARFHKDGALTQ-----LNVAFSREQAHKV 543
Query: 483 YVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL 541
YVQH + + +W L+ A IYV G A M DV +TF +IV++ G A +++
Sbjct: 544 YVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPMEHTQAVDYV 603
Query: 542 KALQRAGRYHVEAWS 556
K L GRY ++ WS
Sbjct: 604 KKLMTKGRYSLDVWS 618
>pdb|1J9Z|A Chain A, Cypor-W677g
pdb|1J9Z|B Chain B, Cypor-W677g
Length = 622
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 168/558 (30%), Positives = 268/558 (48%), Gaps = 61/558 (10%)
Query: 18 LEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEGALDPWM 77
L GV++AVFGLG+ Y+ FN + K +D RL LGA + E GLGDD E W
Sbjct: 107 LTGVKFAVFGLGNKTYEHFNAMGKYVDQRLEQLGAQRIFELGLGDDD--GNLEEDFITWR 164
Query: 78 RSLWRRLHQIDPSFF---PQGPDHVIEEMKLIDQPKVHITYHSIDNAASRLSNASDLEGI 134
W + + FF G + I + +L+ VH
Sbjct: 165 EQFWPAVCE----FFGVEATGEESSIRQYELV----VHED-------------------- 196
Query: 135 RMQLETARSMSAGKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAA 188
M + + G+L +Y N+ FL + G+ + + H E + +
Sbjct: 197 -MDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQGTERHLMHLELDISDSK 255
Query: 189 IEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKL 248
I YE GD + + P+ D A V+ + D D ++++ + + ++ K+ P
Sbjct: 256 IRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEESN----KKHPFPCPTTY 311
Query: 249 RTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRT 306
RT + +D+T+ PR ++ +A+ E+E L AS EG++ + + RR
Sbjct: 312 RTALTYYLDITNP-PRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVVEARRH 370
Query: 307 VLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKR 366
+L +L+D+PS++ PID L +L+P L+ R +SI+SS HPN VH+ V + R
Sbjct: 371 ILAILQDYPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEAKSGRVN 430
Query: 367 TGLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEE 421
G+ + WL +P + G +P + +K P + P+I++GPGTG APF GF++E
Sbjct: 431 KGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPFMGFIQE 490
Query: 422 RA-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP 479
RA ++ + ++GCR D D+LYRE L+ DG ++ VAFSR+Q
Sbjct: 491 RAWLREQGKEVGETLLYYGCRRSDEDYLYRE-ELARFHKDGALTQ-----LNVAFSREQA 544
Query: 480 QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAA 538
KVYVQH + + +W L+ A IYV G A M DV +TF +IV++ G A
Sbjct: 545 HKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPMEHTQAV 604
Query: 539 NWLKALQRAGRYHVEAWS 556
+++K L GRY ++ S
Sbjct: 605 DYVKKLMTKGRYSLDVGS 622
>pdb|1JA0|A Chain A, Cypor-W677x
pdb|1JA0|B Chain B, Cypor-W677x
Length = 620
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 167/555 (30%), Positives = 267/555 (48%), Gaps = 61/555 (10%)
Query: 18 LEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEGALDPWM 77
L GV++AVFGLG+ Y+ FN + K +D RL LGA + E GLGDD E W
Sbjct: 107 LTGVKFAVFGLGNKTYEHFNAMGKYVDQRLEQLGAQRIFELGLGDDD--GNLEEDFITWR 164
Query: 78 RSLWRRLHQIDPSFF---PQGPDHVIEEMKLIDQPKVHITYHSIDNAASRLSNASDLEGI 134
W + + FF G + I + +L+ VH
Sbjct: 165 EQFWPAVCE----FFGVEATGEESSIRQYELV----VHED-------------------- 196
Query: 135 RMQLETARSMSAGKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAA 188
M + + G+L +Y N+ FL + G+ + + H E + +
Sbjct: 197 -MDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQGTERHLMHLELDISDSK 255
Query: 189 IEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKL 248
I YE GD + + P+ D A V+ + D D ++++ + + ++ K+ P
Sbjct: 256 IRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEESN----KKHPFPCPTTY 311
Query: 249 RTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRT 306
RT + +D+T+ PR ++ +A+ E+E L AS EG++ + + RR
Sbjct: 312 RTALTYYLDITNP-PRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVVEARRH 370
Query: 307 VLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKR 366
+L +L+D+PS++ PID L +L+P L+ R +SI+SS HPN VH+ V + R
Sbjct: 371 ILAILQDYPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEAKSGRVN 430
Query: 367 TGLCSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEE 421
G+ + WL +P + G +P + +K P + P+I++GPGTG APF GF++E
Sbjct: 431 KGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPFMGFIQE 490
Query: 422 RA-IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP 479
RA ++ + ++GCR D D+LYRE L+ DG ++ VAFSR+Q
Sbjct: 491 RAWLREQGKEVGETLLYYGCRRSDEDYLYRE-ELARFHKDGALTQ-----LNVAFSREQA 544
Query: 480 QKVYVQHKMLEQSQRIWNLLL-SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAA 538
KVYVQH + + +W L+ A IYV G A M DV +TF +IV++ G A
Sbjct: 545 HKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPMEHTQAV 604
Query: 539 NWLKALQRAGRYHVE 553
+++K L GRY ++
Sbjct: 605 DYVKKLMTKGRYSLD 619
>pdb|3FJO|A Chain A, Structure Of Chimeric Yh Cpr
Length = 637
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 165/554 (29%), Positives = 271/554 (48%), Gaps = 53/554 (9%)
Query: 18 LEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEGALDPWM 77
L +RY +FGLG+S Y+ FN AKK + L GA + + G DD + E +
Sbjct: 122 LSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSAAGAIRLGKLGEADDGAGTTDEDYM---- 177
Query: 78 RSLWRRLHQIDPSFFPQGPDHVIEEMKLIDQPKVHITYHSIDNAASRLSNASDLEGIRMQ 137
W+ D ++E +K D+ V T L +D++ ++
Sbjct: 178 --AWK--------------DSILEVLK--DELGVEATGEESSIRQYELVVHTDIDAAKVY 219
Query: 138 LETARSMSAGKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEY 191
+ G+L +Y N+ FL + G+ + + H E + + I Y
Sbjct: 220 MG-----EMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQGTERHLMHLELDISDSKIRY 274
Query: 192 EVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTF 251
E GD + + P+ D A V+ + D D ++++ + + ++ K+ P RT
Sbjct: 275 ESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEESN----KKHPFPCPTSYRTA 330
Query: 252 VELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLE 309
+ +D+T+ PR ++ +A+ E+E L+ AS EG++ + + RR +L
Sbjct: 331 LTYYLDITN-PPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILA 389
Query: 310 VLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGL 369
+L+D PS++ PID L +L+P L+ R +SI+SS HPN VH+ VV + T R G+
Sbjct: 390 ILQDCPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGV 449
Query: 370 CSVWLAGLDP--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA- 423
+ WL +P + G +P + +K P + P+I++GPGTG APF GF++ERA
Sbjct: 450 ATNWLRAKEPAGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAW 509
Query: 424 IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKV 482
++ + ++GCR D D+LYRE L+ DG ++ VAFSR+Q KV
Sbjct: 510 LRQQGKEVGETLLYYGCRRSDEDYLYRE-ELAQFHRDGALTQ-----LNVAFSREQSHKV 563
Query: 483 YVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLK 542
YVQH + + + +W L+ A IYV G A M DV +TF +IV++ G A +++K
Sbjct: 564 YVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIK 623
Query: 543 ALQRAGRYHVEAWS 556
L GRY ++ WS
Sbjct: 624 KLMTKGRYSLDVWS 637
>pdb|3QFS|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase
(FadNADPH Domain)
Length = 458
Score = 221 bits (564), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 135/425 (31%), Positives = 221/425 (52%), Gaps = 26/425 (6%)
Query: 147 GKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEIL 200
G+L +Y N+ FL + G+ + + H E + + I YE GD + +
Sbjct: 45 GRLKSYENQKPPFDAKNPFLAAVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVY 104
Query: 201 PSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTS 260
P+ D A V+ + D D ++++ + + ++ K+ P RT + +D+T+
Sbjct: 105 PANDSALVNQLGKILGADLDVVMSLNNLDEESN----KKHPFPCPTSYRTALTYYLDITN 160
Query: 261 ASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQ 318
PR ++ +A+ E+E L+ AS EG++ + + RR +L +L+D PS++
Sbjct: 161 P-PRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLR 219
Query: 319 MPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLD 378
PID L +L+P L+ R +SI+SS HPN VH+ VV + T R G+ + WL +
Sbjct: 220 PPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKE 279
Query: 379 P--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA-IQSSSGPAA 432
P + G +P + +K P + P+I++GPGTG APF GF++ERA ++
Sbjct: 280 PVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVG 339
Query: 433 PIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQ 491
+ ++GCR D D+LYRE L+ DG ++ VAFSR+Q KVYVQH + +
Sbjct: 340 ETLLYYGCRRSDEDYLYRE-ELAQFHRDGALTQ-----LNVAFSREQSHKVYVQHLLKQD 393
Query: 492 SQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
+ +W L+ A IYV G A M DV +TF +IV++ G A +++K L GRY
Sbjct: 394 REHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYS 453
Query: 552 VEAWS 556
++ WS
Sbjct: 454 LDVWS 458
>pdb|3QFT|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase
(FadNADPH DOMAIN And R457h Mutant)
Length = 458
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 134/425 (31%), Positives = 220/425 (51%), Gaps = 26/425 (6%)
Query: 147 GKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEIL 200
G+L +Y N+ FL + G+ + + H E + + I YE GD + +
Sbjct: 45 GRLKSYENQKPPFDAKNPFLAAVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVY 104
Query: 201 PSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTS 260
P+ D A V+ + D D ++++ + + ++ K+ P RT + +D+T+
Sbjct: 105 PANDSALVNQLGKILGADLDVVMSLNNLDEESN----KKHPFPCPTSYRTALTYYLDITN 160
Query: 261 ASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQ 318
PR ++ +A+ E+E L+ AS EG++ + + RR +L +L+D PS++
Sbjct: 161 P-PRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLR 219
Query: 319 MPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLD 378
PID L +L+P L+ +SI+SS HPN VH+ VV + T R G+ + WL +
Sbjct: 220 PPIDHLCELLPRLQAHYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKE 279
Query: 379 P--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA-IQSSSGPAA 432
P + G +P + +K P + P+I++GPGTG APF GF++ERA ++
Sbjct: 280 PVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVG 339
Query: 433 PIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQ 491
+ ++GCR D D+LYRE L+ DG ++ VAFSR+Q KVYVQH + +
Sbjct: 340 ETLLYYGCRRSDEDYLYRE-ELAQFHRDGALTQ-----LNVAFSREQSHKVYVQHLLKQD 393
Query: 492 SQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
+ +W L+ A IYV G A M DV +TF +IV++ G A +++K L GRY
Sbjct: 394 REHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYS 453
Query: 552 VEAWS 556
++ WS
Sbjct: 454 LDVWS 458
>pdb|1TLL|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
Reductase Module At 2.3 A Resolution.
pdb|1TLL|B Chain B, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
Reductase Module At 2.3 A Resolution
Length = 688
Score = 181 bits (459), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 169/554 (30%), Positives = 266/554 (48%), Gaps = 56/554 (10%)
Query: 18 LEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEGALDPWM 77
L VR++VFGLG Y F +D L +LG +++ GD+ G E A W
Sbjct: 133 LANVRFSVFGLGSRAYPHFCAFGHAVDTLLEELGGERILKMREGDEL--CGQEEAFRTWA 190
Query: 78 RSLWRRLHQIDPSFFPQGPDHVIEEMKLIDQPKVHITYHSIDNAASRLSNASDLEGIRMQ 137
+ +++ + F G D IE +P + I N S N L
Sbjct: 191 KKVFKAACDV----FCVGDDVNIE------KPNNSL----ISNDRSWKRNKFRL----TY 232
Query: 138 LETARSMSAGKLSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFV-SAAIEYEVGDV 196
+ A ++ G LSN + K V +++ Q L S + + ++Y+ GD
Sbjct: 233 VAEAPDLTQG-LSNVHKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDH 291
Query: 197 LEILPSQDPAAVDTFIQRCNLDPDA--LITVQHKEMKNYLPDIHKNTTEV----PIKLRT 250
L + P V+ I+R P A ++ V+ E +N + N + P +
Sbjct: 292 LGVFPGNHEDLVNALIERLEDAPPANHVVKVEMLEERNTALGVISNWKDESRLPPCTIFQ 351
Query: 251 FVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEV 310
+ +D+T+ P + + AT E EK+RL + +G + ++ + T++EV
Sbjct: 352 AFKYYLDITTP-PTPLQLQQFASLATNEKEKQRLLVLS--KGLQEYEEWKWGKNPTMVEV 408
Query: 311 LEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRK--RTG 368
LE+FPS+QMP L+ + L+ R +SISSSP +P++VHLTV++VS+ T G
Sbjct: 409 LEEFPSIQMPATLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHG 468
Query: 369 LCSVWLAGLDPQQGIYIPAWFQKGS----LPRPPPSVPLILIGPGTGCAPFRGFVEERA- 423
+CS WL + Q +P F +G+ LPR P VP IL+GPGTG APFR F ++R
Sbjct: 469 VCSSWLNRI--QADDVVPC-FVRGAPSFHLPR-NPQVPCILVGPGTGIAPFRSFWQQRQF 524
Query: 424 -IQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRK--QP 479
IQ P++ FGCR D +YRE L + N GVF E Y A+SR+ +P
Sbjct: 525 DIQHKGMNPCPMVLVFGCRQSKIDHIYREETL-QAKNKGVFRE-----LYTAYSREPDRP 578
Query: 480 QKVYVQHKMLEQ-SQRIWNLLLSKAS-IYVAGSATKMPSDVWSTFEEIVSKEGEASRDSA 537
+K YVQ + EQ ++ ++ L + IYV G T M +DV + I++++G+ S + A
Sbjct: 579 KK-YVQDVLQEQLAESVYRALKEQGGHIYVCGDVT-MAADVLKAIQRIMTQQGKLSEEDA 636
Query: 538 ANWLKALQRAGRYH 551
++ L+ RYH
Sbjct: 637 GVFISRLRDDNRYH 650
>pdb|1F20|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
FadNADP+ Domain At 1.9a Resolution
Length = 435
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 136/423 (32%), Positives = 215/423 (50%), Gaps = 35/423 (8%)
Query: 149 LSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFV-SAAIEYEVGDVLEILPSQDPAA 207
LSN + K V +++ Q L S + + ++Y+ GD L + P
Sbjct: 22 LSNVHKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDL 81
Query: 208 VDTFIQRCNLDPDA--LITVQHKEMKNYLPDIHKNTTEV----PIKLRTFVELTMDVTSA 261
V+ I+R P A ++ V+ E +N + N + P + + +D+T+
Sbjct: 82 VNALIERLEDAPPANHVVKVEMLEERNTALGVISNWKDESRLPPCTIFQAFKYYLDITTP 141
Query: 262 SPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQMPI 321
P + + AT E EK+RL + +G + ++ + T++EVLE+FPS+QMP
Sbjct: 142 -PTPLQLQQFASLATNEKEKQRLLVLS--KGLQEYEEWKWGKNPTMVEVLEEFPSIQMPA 198
Query: 322 DWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRK--RTGLCSVWLAGLDP 379
L+ + L+ R +SISSSP +P++VHLTV++VS+ T G+CS WL +
Sbjct: 199 TLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRI-- 256
Query: 380 QQGIYIPAWFQKGS----LPRPPPSVPLILIGPGTGCAPFRGFVEERA--IQSSSGPAAP 433
Q +P F +G+ LPR P VP IL+GPGTG APFR F ++R IQ P
Sbjct: 257 QADDVVPC-FVRGAPSFHLPR-NPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCP 314
Query: 434 IIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRK--QPQKVYVQHKMLE 490
++ FGCR D +YRE L + N GVF E Y A+SR+ +P+K YVQ + E
Sbjct: 315 MVLVFGCRQSKIDHIYREETL-QAKNKGVFRE-----LYTAYSREPDRPKK-YVQDVLQE 367
Query: 491 Q-SQRIWNLLLSKAS-IYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAG 548
Q ++ ++ L + IYV G T M +DV + I++++G+ S + A ++ L+
Sbjct: 368 QLAESVYRALKEQGGHIYVCGDVT-MAADVLKAIQRIMTQQGKLSEEDAGVFISRLRDDN 426
Query: 549 RYH 551
RYH
Sbjct: 427 RYH 429
>pdb|4DQK|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3
pdb|4DQK|B Chain B, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3
Length = 391
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 201/408 (49%), Gaps = 39/408 (9%)
Query: 162 MIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDA 221
++ ++ L + GS + H E E A Y+ GD L ++P V+ R LD
Sbjct: 9 VVASKELQQPGSARSTRHLEIELPKEA-SYQEGDHLGVIPRNYEGIVNRVTARFGLDASQ 67
Query: 222 LITVQHKEMK-NYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHE 280
I ++ +E K +LP + E +L +VEL VT R M+ A
Sbjct: 68 QIRLEAEEEKLAHLPLAKTVSVE---ELLQYVELQDPVT-----RTQLRAMAAKTVAPPH 119
Query: 281 KERLQYFASPEGRDDLYKYNQKERR-TVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSIS 339
K L+ + YK +R T+LE+LE +P+ +M + L+P ++ R +SIS
Sbjct: 120 KVELEALLEKQA----YKEQVLAKRLTMLELLEKYPACEMKFSEFIALLPSIRPRYYSIS 175
Query: 340 SSPLAHPNQVHLTVSVVS---WTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWF----QKG 392
SSP Q +TVSVVS W+ + K G+ S +LA L Q+G I + +
Sbjct: 176 SSPRVDEKQASITVSVVSGEAWSGYGEYK--GIASNYLAEL--QEGDTITCFISTPQSEF 231
Query: 393 SLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPA-APIIFFFGCRN-EDDFLYRE 450
+LP+ P + PLI++GPGTG APFRGFV+ R G + +FGCR+ +D+LY+E
Sbjct: 232 TLPKDPET-PLIMVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRSPHEDYLYQE 290
Query: 451 LWLSHSLNDGVFSEAKGGGFYVAFSR--KQPQKVYVQHKMLEQSQRIWNLLLSKASIYVA 508
L ++ ++G+ + + AFSR QP K YVQH M + +++ LL A Y+
Sbjct: 291 -ELENAQSEGIIT------LHTAFSRMPNQP-KTYVQHVMEQDGKKLIELLDQGAHFYIC 342
Query: 509 GSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 556
G ++M V +T + + + S A WL+ L+ GRY + W+
Sbjct: 343 GDGSQMAPAVEATLMKSYADVHQVSEADARLWLQQLEEKGRYAKDVWA 390
>pdb|4DQL|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3 In Complex With Nadp+
pdb|4DQL|B Chain B, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3 In Complex With Nadp+
Length = 393
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 200/408 (49%), Gaps = 39/408 (9%)
Query: 162 MIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDA 221
++ ++ L + GS + H E E A Y+ GD L ++P V+ R LD
Sbjct: 11 VVASKELQQPGSARSTRHLEIELPKEA-SYQEGDHLGVIPRNYEGIVNRVTARFGLDASQ 69
Query: 222 LITVQHKEMK-NYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHE 280
I ++ +E K +LP + E +L +VEL VT R M+
Sbjct: 70 QIRLEAEEEKLAHLPLAKTVSVE---ELLQYVELQDPVT-----RTQLRAMAAKTVCPPH 121
Query: 281 KERLQYFASPEGRDDLYKYNQKERR-TVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSIS 339
K L+ + YK +R T+LE+LE +P+ +M + L+P ++ R +SIS
Sbjct: 122 KVELEALLEKQA----YKEQVLAKRLTMLELLEKYPACEMKFSEFIALLPSIRPRYYSIS 177
Query: 340 SSPLAHPNQVHLTVSVVS---WTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWF----QKG 392
SSP Q +TVSVVS W+ + K G+ S +LA L Q+G I + +
Sbjct: 178 SSPRVDEKQASITVSVVSGEAWSGYGEYK--GIASNYLAEL--QEGDTITCFISTPQSEF 233
Query: 393 SLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPA-APIIFFFGCRN-EDDFLYRE 450
+LP+ P + PLI++GPGTG APFRGFV+ R G + +FGCR+ +D+LY+E
Sbjct: 234 TLPKDPET-PLIMVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRSPHEDYLYQE 292
Query: 451 LWLSHSLNDGVFSEAKGGGFYVAFSR--KQPQKVYVQHKMLEQSQRIWNLLLSKASIYVA 508
L ++ ++G+ + + AFSR QP K YVQH M + +++ LL A Y+
Sbjct: 293 -ELENAQSEGIIT------LHTAFSRMPNQP-KTYVQHVMEQDGKKLIELLDQGAHFYIC 344
Query: 509 GSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 556
G ++M V +T + + + S A WL+ L+ GRY + W+
Sbjct: 345 GDGSQMAPAVEATLMKSYADVHQVSEADARLWLQQLEEKGRYAKDVWA 392
>pdb|1DDG|A Chain A, Crystal Structure Of Sir-Fp60
pdb|1DDG|B Chain B, Crystal Structure Of Sir-Fp60
pdb|1DDI|A Chain A, Crystal Structure Of Sir-Fp60
Length = 374
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 186/408 (45%), Gaps = 39/408 (9%)
Query: 150 SNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVD 209
S Y+ A + NQ +T S KDV H E + + + Y+ GD L + DPA V
Sbjct: 4 SPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVK 63
Query: 210 TFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFE 269
++ L D +TV+ K T + L+ ELT++ +
Sbjct: 64 ELVELLWLKGDEPVTVEGK------------TLPLNEALQWHFELTVNTANIVENYATLT 111
Query: 270 VMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVP 329
+K +LQ++A+ D+ + F Q+ + L+ L+
Sbjct: 112 RSETLLPLVGDKAKLQHYAATTPIVDMVR---------------FSPAQLDAEALINLLR 156
Query: 330 PLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWF 389
PL R +SI+SS N+VH+TV VV + R R G S +LA ++G + +
Sbjct: 157 PLTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEG-EVRVFI 214
Query: 390 QKGSLPRPP--PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFL 447
+ R P P P+I+IGPGTG APFR F+++RA + P +FF +DFL
Sbjct: 215 EHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRA--ADEAPGKNWLFFGNPHFTEDFL 272
Query: 448 YRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYV 507
Y+ W + + +GV + +A+SR Q +KVYVQ K+ EQ +W + A IYV
Sbjct: 273 YQVEWQRY-VKEGVLTRID-----LAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYV 326
Query: 508 AGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAW 555
G A +M DV E++++ G ++A +L L+ RY + +
Sbjct: 327 CGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 374
>pdb|2QTZ|A Chain A, Crystal Structure Of The Nadp+-Bound Fad-Containing
Fnr-Like Module Of Human Methionine Synthase Reductase
Length = 539
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 205/463 (44%), Gaps = 50/463 (10%)
Query: 132 EGIRMQLETARSMSAGKLSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEY 191
E +++ L+ + ++S + V + + K LT + + K E + + Y
Sbjct: 89 EYLQVHLQESLGQEESQVSVTSADPVFQVPISKAVQLTTNDAIKTTLLVELDISNTDFSY 148
Query: 192 EVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTF 251
+ GD ++ + V + +QR L+ +H + D K +P +
Sbjct: 149 QPGDAFSVICPNSDSEVQSLLQRLQLEDKR----EHXVLLKIKADTKKKGATLPQHIPAG 204
Query: 252 VELTMDVT-----SASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRT 306
L T A P++ F + + + EK RLQ S +G D ++ +
Sbjct: 205 CSLQFIFTWCLEIRAIPKKAFLRALVDYTSDSAEKRRLQELCSKQGAADYSRFVRDAXAC 264
Query: 307 VLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSW--TTPYKR 364
+L++L FPS Q P+ L++ +P L+ R +S +SS L HP ++H ++V + T +
Sbjct: 265 LLDLLLAFPSCQPPLSLLLEHLPKLQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEV 324
Query: 365 KRTGLCSVWLA--------------------GLDPQQGIYIPAWFQKGSLPRPPPSVPLI 404
R G+C+ WLA L P+ I+ P LP PS+P+I
Sbjct: 325 LRKGVCTGWLALLVASVLQPNIHASHEDSGKALAPKISIF-PRTTNSFHLPD-DPSIPII 382
Query: 405 LIGPGTGCAPFRGFVEERAI---QSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDG 460
++GPGTG APF GF++ R Q G + FFGCR++D D+L+R+ L H L G
Sbjct: 383 MVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGCRHKDRDYLFRK-ELRHFLKHG 441
Query: 461 VFSEAKGGGFYVAFSRKQP------QKVYVQHKMLEQSQRIWNLLLSK-ASIYVAGSATK 513
+ + K V+FSR P YVQ + Q++ +LL + IYV G A
Sbjct: 442 ILTHLK-----VSFSRDAPVGEEEAPAKYVQDNIQLHGQQVARILLQENGHIYVCGDAKN 496
Query: 514 MPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 556
M DV +I+SKE + A L L+ RY + WS
Sbjct: 497 MAKDVHDALVQIISKEVGVEKLEAMKTLATLKEEKRYLQDIWS 539
>pdb|2QTL|A Chain A, Crystal Structure Of The Fad-Containing Fnr-Like Module Of
Human Methionine Synthase Reductase
Length = 539
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 205/463 (44%), Gaps = 50/463 (10%)
Query: 132 EGIRMQLETARSMSAGKLSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEY 191
E +++ L+ + ++S + V + + K LT + + K E + + Y
Sbjct: 89 EYLQVHLQESLGQEESQVSVTSADPVFQVPISKAVQLTTNDAIKTTLLVELDISNTDFSY 148
Query: 192 EVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTF 251
+ GD ++ + V + +QR L+ +H + D K +P +
Sbjct: 149 QPGDAFSVICPNSDSEVQSLLQRLQLEDKR----EHXVLLKIKADTKKKGATLPQHIPAG 204
Query: 252 VELTMDVT-----SASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRT 306
L T A P++ F + + + EK RLQ S +G D ++ +
Sbjct: 205 XSLQFIFTWCLEIRAIPKKAFLRALVDYTSDSAEKRRLQELCSKQGAADYSRFVRDAXAC 264
Query: 307 VLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSW--TTPYKR 364
+L++L FPS Q P+ L++ +P L+ R +S +SS L HP ++H ++V + T +
Sbjct: 265 LLDLLLAFPSCQPPLSLLLEHLPKLQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEV 324
Query: 365 KRTGLCSVWLA--------------------GLDPQQGIYIPAWFQKGSLPRPPPSVPLI 404
R G+C+ WLA L P+ I+ P LP PS+P+I
Sbjct: 325 LRKGVCTGWLALLVASVLQPNIHASHEDSGKALAPKISIF-PRTTNSFHLPD-DPSIPII 382
Query: 405 LIGPGTGCAPFRGFVEERAI---QSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDG 460
++GPGTG APF GF++ R Q G + FFGCR++D D+L+R+ L H L G
Sbjct: 383 MVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGCRHKDRDYLFRK-ELRHFLKHG 441
Query: 461 VFSEAKGGGFYVAFSRKQP------QKVYVQHKMLEQSQRIWNLLLSK-ASIYVAGSATK 513
+ + K V+FSR P YVQ + Q++ +LL + IYV G A
Sbjct: 442 ILTHLK-----VSFSRDAPVGEEEAPAKYVQDNIQLHGQQVARILLQENGHIYVCGDAKN 496
Query: 514 MPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 556
M DV +I+SKE + A L L+ RY + WS
Sbjct: 497 MAKDVHDALVQIISKEVGVEKLEAMKTLATLKEEKRYLQDIWS 539
>pdb|2BF4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductases.
pdb|2BF4|B Chain B, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductases.
pdb|2BN4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductase
pdb|2BN4|B Chain B, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductase
Length = 682
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 150/582 (25%), Positives = 250/582 (42%), Gaps = 76/582 (13%)
Query: 18 LEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEGAL---D 74
L +RY +FGLG+S Y+ FN AKK + L GA + + G DD + E + D
Sbjct: 133 LSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSAAGAIRLGKLGEADDGAGTTDEDYMAWKD 192
Query: 75 PWMRSLWRRLHQIDPSFFPQGPDHVIEEMKLIDQPKVHITYHSIDNAASRLSNASDLEGI 134
+ L LH + +E K Q + + D+ + +A L
Sbjct: 193 SILEVLKDELHLDE------------QEAKFTSQFQYTVLNEITDSMSLGEPSAHYLPSH 240
Query: 135 RMQLETARSMSAGKLSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVG 194
++ R+ +L ++ ++K++ L S ++ H EF+ + I+Y G
Sbjct: 241 QLN----RNADGIQLGPFDLSQPYIAPIVKSRELFSSND-RNCIHSEFDLSGSNIKYSTG 295
Query: 195 DVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVEL 254
D L + PS V+ F+ NLDP+ + ++ + +P T + ++ ++E+
Sbjct: 296 DHLAVWPSNPLEKVEQFLSIFNLDPETIFDLKPLDPTVKVP--FPTPTTIGAAIKHYLEI 353
Query: 255 TMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDF 314
T V+ R F + FA KE+L + + +D + + + L+
Sbjct: 354 TGPVS-----RQLFSSLIQFAPNADVKEKLTLLS--KDKDQFAVEITSKYFNIADALKYL 406
Query: 315 PSV----QMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKR---T 367
+P+ +LV+ VP + R +SISSS L+ VH+T V ++ P
Sbjct: 407 SDGAKWDTVPMQFLVESVPQMTPRYYSISSSSLSEKQTVHVTSIVENFPNPELPDAPPVV 466
Query: 368 GLCSVWLAGLDPQQG------------------------IYIPAWFQKGSLPRPP-PSVP 402
G+ + L + Q +P ++ + P PS P
Sbjct: 467 GVTTNLLRNIQLAQNNVNIAETNLPVHYDLNGPRKLFANYKLPVHVRRSNFRLPSNPSTP 526
Query: 403 LILIGPGTGCAPFRGFVEERAI----QSSSGPAAPI---IFFFGCRNEDDFLYRELWLSH 455
+I+IGPGTG APFRGF+ ER Q G + I F+G RN DDFLY++ W +
Sbjct: 527 VIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSLGKHILFYGSRNTDDFLYQDEWPEY 586
Query: 456 SLN-DGVFSEAKGGGFYVAFSR-KQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATK 513
+ DG F VA SR +KVYVQ K+ + +++ ++ + A IYV G A
Sbjct: 587 AKKLDGSFE------MVVAHSRLPNTKKVYVQDKLKDYEDQVFEMINNGAFIYVCGDAKG 640
Query: 514 MPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAW 555
M V + I+S+ + D A +K L+ +GRY + W
Sbjct: 641 MAKGVSTALVGILSRGKSITTDEATELIKMLKTSGRYQEDVW 682
>pdb|2BPO|A Chain A, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g,
Y75f, K78a.
pdb|2BPO|B Chain B, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g,
Y75f, K78a
Length = 682
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 150/582 (25%), Positives = 250/582 (42%), Gaps = 76/582 (13%)
Query: 18 LEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEGAL---D 74
L +RY +FGLG+S Y+ FN AKK + L GA + + G DD + E + D
Sbjct: 133 LSNLRYNMFGLGNSTYEFFNGAAKKAEKHLSAAGAIRLGKLGEADDGAGTTDEDYMAWKD 192
Query: 75 PWMRSLWRRLHQIDPSFFPQGPDHVIEEMKLIDQPKVHITYHSIDNAASRLSNASDLEGI 134
+ L LH + +E K Q + + D+ + +A L
Sbjct: 193 SILEVLKDELHLDE------------QEAKFTSQFQYTVLNEITDSMSLGEPSAHYLPSH 240
Query: 135 RMQLETARSMSAGKLSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVG 194
++ R+ +L ++ ++K++ L S ++ H EF+ + I+Y G
Sbjct: 241 QLN----RNADGIQLGPFDLSQPYIAPIVKSRELFSSND-RNCIHSEFDLSGSNIKYSTG 295
Query: 195 DVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVEL 254
D L + PS V+ F+ NLDP+ + ++ + +P T + ++ ++E+
Sbjct: 296 DHLAVWPSNPLEKVEQFLSIFNLDPETIFDLKPLDPTVKVP--FPTPTTIGAAIKHYLEI 353
Query: 255 TMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDF 314
T V+ R F + FA KE+L + + +D + + + L+
Sbjct: 354 TGPVS-----RQLFSSLIQFAPNADVKEKLTLLS--KDKDQFAVEITSKYFNIADALKYL 406
Query: 315 PSV----QMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKR---T 367
+P+ +LV+ VP + R +SISSS L+ VH+T V ++ P
Sbjct: 407 SDGAKWDTVPMQFLVESVPQMTPRYYSISSSSLSEKQTVHVTSIVENFPNPELPDAPPVV 466
Query: 368 GLCSVWLAGLDPQQG------------------------IYIPAWFQKGSLPRPP-PSVP 402
G+ + L + Q +P ++ + P PS P
Sbjct: 467 GVTTNLLRNIQLAQNNVNIAETNLPVHYDLNGPRKLFANYKLPVHVRRSNFRLPSNPSTP 526
Query: 403 LILIGPGTGCAPFRGFVEERAI----QSSSGPAAPI---IFFFGCRNEDDFLYRELWLSH 455
+I+IGPGTG APFRGF+ ER Q G + I F+G RN DDFLY++ W +
Sbjct: 527 VIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSLGKHILFYGSRNTDDFLYQDEWPEY 586
Query: 456 SLN-DGVFSEAKGGGFYVAFSR-KQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATK 513
+ DG F VA SR +KVYVQ K+ + +++ ++ + A IYV G A
Sbjct: 587 AKKLDGSFE------MVVAHSRLPNTKKVYVQDKLKDYEDQVFEMINNGAFIYVCGDAKG 640
Query: 514 MPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAW 555
M V + I+S+ + D A +K L+ +GRY + W
Sbjct: 641 MAKGVSTALVGILSRGKSITTDEATELIKMLKTSGRYQEDVW 682
>pdb|3VO1|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
pdb|3VO1|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
Length = 314
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 104/244 (42%), Gaps = 36/244 (14%)
Query: 330 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 386
P K R +SI+SS L V L V + +T G+CS +L L P + I
Sbjct: 89 PHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEVVKGVCSNFLCDLKPGAEVKIT 148
Query: 387 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 441
K L P+ +I++ GTG APFR F+ EE +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLATGTGIAPFRSFLWKMFFEEHEDYKYTGLA---WLFLGVP 205
Query: 442 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAF--SRKQP----QKVYVQHKMLEQSQRI 495
D LY+E E F + F SR+Q +K+Y+Q +M E + +
Sbjct: 206 TSDTLLYKEELEK-------MKEMAPDNFRLDFAVSREQTNAAGEKMYIQTRMAEYKEEL 258
Query: 496 WNLLLSKASIYVAGSATK-MPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYH 551
W LL K + YV K M + ++ +K+G NWL K L+++ +++
Sbjct: 259 WE-LLKKDNTYVYMCGLKGMEKGIDDIMLDLAAKDG-------INWLDYKKQLKKSEQWN 310
Query: 552 VEAW 555
VE +
Sbjct: 311 VEVY 314
>pdb|3VO2|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
pdb|3VO2|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
Length = 310
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 102/244 (41%), Gaps = 36/244 (14%)
Query: 330 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 386
P K R +SI+SS L V L V + +T G+CS +L L P + I
Sbjct: 85 PHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDLKPGADVKIT 144
Query: 387 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRG-----FVEERAIQSSSGPAAPIIFFFGCR 441
K L P+ +I++ GTG APFR F+EE SG A F G
Sbjct: 145 GPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLEEHEDYKFSGLA---WLFLGVP 201
Query: 442 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAF--SRKQP----QKVYVQHKMLEQSQRI 495
D LY+E E F + F SR+Q +K+Y+Q +M E + +
Sbjct: 202 TSDSLLYKEELEK-------MKEMAPDNFRLDFAVSREQTNAAGEKMYIQTRMAEYREEL 254
Query: 496 WNLLLSKASIYVAGSATK-MPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYH 551
W LL K + YV K M + + +K+G +W+ K L++ +++
Sbjct: 255 WE-LLKKDNTYVYMCGLKGMEKGIDDIMLNLAAKDG-------IDWMQYKKQLKKGEQWN 306
Query: 552 VEAW 555
VE +
Sbjct: 307 VEVY 310
>pdb|1JB9|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms
Length = 316
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 17/197 (8%)
Query: 366 RTGLCSVWLAGLDPQQGIYIPAWFQKGSL-PRPPPSVPLILIGPGTGCAPFRGFVEERAI 424
+ G+CS +L P I + K L P P+ I+I GTG APFRG++ +
Sbjct: 130 KNGVCSNFLCNSKPGDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFM 189
Query: 425 QSSSGP--AAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ-- 480
+ F G N D LY E + S+ + + A SR+Q
Sbjct: 190 EDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSY-----LKQYPDNFRYDKALSREQKNRS 244
Query: 481 --KVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAA 538
K+YVQ K+ E S I+ LL A IY G MP + T +++ + GE S
Sbjct: 245 GGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLKGMMPG-IQDTLKKVAERRGE----SWD 299
Query: 539 NWLKALQRAGRYHVEAW 555
L L++ ++HVE +
Sbjct: 300 QKLAQLKKNKQWHVEVY 316
>pdb|3LVB|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms - Test Set Withheld
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 17/197 (8%)
Query: 366 RTGLCSVWLAGLDPQQGIYIPAWFQKGSL-PRPPPSVPLILIGPGTGCAPFRGFVEERAI 424
+ G+CS +L P I + K L P P+ I+I GTG APFRG++ +
Sbjct: 125 KNGVCSNFLCNSKPGDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFM 184
Query: 425 QSSSGP--AAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ-- 480
+ F G N D LY E + S+ + + A SR+Q
Sbjct: 185 EDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSY-----LKQYPDNFRYDKALSREQKNRS 239
Query: 481 --KVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAA 538
K+YVQ K+ E S I+ LL A IY G MP + T +++ + GE S
Sbjct: 240 GGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLKGMMPG-IQDTLKKVAERRGE----SWD 294
Query: 539 NWLKALQRAGRYHVEAW 555
L L++ ++HVE +
Sbjct: 295 QKLAQLKKNKQWHVEVY 311
>pdb|3LO8|A Chain A, Crystal Structure Of The Oxidized Form Of Ferredoxin:nadp+
Reductase From Maize Root At 1.05 Angstroms
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 17/195 (8%)
Query: 366 RTGLCSVWLAGLDPQQGIYIPAWFQKGSL-PRPPPSVPLILIGPGTGCAPFRGFVEERAI 424
+ G+CS +L P I + K L P P+ I+I GTG APFRG++ +
Sbjct: 125 KNGVCSNFLCNSKPGDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFM 184
Query: 425 QSSSGP--AAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ-- 480
+ F G N D LY E + S+ + + A SR+Q
Sbjct: 185 EDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSY-----LKQYPDNFRYDKALSREQKNRS 239
Query: 481 --KVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAA 538
K+YVQ K+ E S I+ LL A IY G MP + T +++ + GE S
Sbjct: 240 GGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLKGMMPG-IQDTLKKVAERRGE----SWD 294
Query: 539 NWLKALQRAGRYHVE 553
L L++ ++HVE
Sbjct: 295 QKLAQLKKNKQWHVE 309
>pdb|1GAQ|A Chain A, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAQ|C Chain C, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAW|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
pdb|1GAW|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
Length = 314
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 330 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 386
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 89 PHKVRLYSIASSAIGDFGDSKTVSLCVKRLIYTNDAGEIVKGVCSNFLCDLQPGDNVQIT 148
Query: 387 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPII--FFFGCRNED 444
K L P+ +I++ GTG APFR F+ + + + F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLATGTGIAPFRSFLWKMFFEKHDDYKFNGLGWLFLGVPTSS 208
Query: 445 DFLYRELWLSHSLNDGVFSEAKGGGFYV--AFSRKQP----QKVYVQHKMLEQSQRIWNL 498
LY+E + G E F V A SR+Q +++Y+Q +M E + +W
Sbjct: 209 SLLYKEEF-------GKMKERAPENFRVDYAVSREQTNAAGERMYIQTRMAEYKEELWE- 260
Query: 499 LLSKASIYVAGSATK-MPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 554
LL K + YV K M + + K+G +W K L+R +++VE
Sbjct: 261 LLKKDNTYVYMCGLKGMEKGIDDIMVSLAEKDG-------IDWFDYKKQLKRGDQWNVEV 313
Query: 555 W 555
+
Sbjct: 314 Y 314
>pdb|1SM4|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
pdb|1SM4|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
Length = 296
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 24/238 (10%)
Query: 330 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 386
P K R +SI+SS L V L V + +T + G+CS +L L P + I
Sbjct: 71 PHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDKGEEVKGVCSNFLCDLKPGADVKIT 130
Query: 387 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 441
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 131 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 187
Query: 442 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 497
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 188 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQTNEKGEKMYIQTRMAQYAEELWT 242
Query: 498 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAW 555
LL + M + + +KEG A++ K L++A +++VE +
Sbjct: 243 LLKKDNTFVYMCGLKGMEQGIDDIMSSLAAKEGI----DWADYKKQLKKAEQWNVEVY 296
>pdb|1W35|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: Y 303 W)
pdb|1W87|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
pdb|1W87|B Chain B, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
Length = 304
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 552 VEAW 555
VE W
Sbjct: 301 VETW 304
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1H85|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Val 136 Replaced By
Leu (V136l)
Length = 295
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPLGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 236
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 552 VEAW 555
VE +
Sbjct: 292 VETY 295
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 7 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 56
>pdb|1GR1|A Chain A, Structure Of Ferredoxin-Nadp+ Reductase With Glu 139
Replaced By Lys (E139k)
Length = 303
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKKMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 244
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 552 VEAW 555
VE +
Sbjct: 300 VETY 303
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 15 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 64
>pdb|1BJK|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Arg 264 Replaced By
Glu (r264e)
Length = 295
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 236
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LEGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 552 VEAW 555
VE +
Sbjct: 292 VETY 295
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 7 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 56
>pdb|1GO2|A Chain A, Structure Of Ferredoxin-nadp+ Reductase With Lys 72
Replaced By Glu (k72e)
Length = 304
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 552 VEAW 555
VE +
Sbjct: 301 VETY 304
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1QUF|A Chain A, X-Ray Structure Of A Complex Nadp+-Ferredoxin:nadp+
Reductase From The Cyanobacterium Anabaena Pcc 7119 At
2.25 Angstroms
Length = 304
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNEKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 552 VEAW 555
VE +
Sbjct: 301 VETY 304
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1QH0|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 76 Mutated By
Asp And Leu 78 Mutated By Asp
Length = 295
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEKDRDYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 236
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 552 VEAW 555
VE +
Sbjct: 292 VETY 295
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 7 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 56
>pdb|1QGA|A Chain A, Pea Fnr Y308w Mutant In Complex With Nadp+
pdb|1QGA|B Chain B, Pea Fnr Y308w Mutant In Complex With Nadp+
Length = 308
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 330 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 386
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 83 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 142
Query: 387 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 441
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 143 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 199
Query: 442 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 497
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 200 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 254
Query: 498 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 554
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 255 LLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 307
Query: 555 W 555
W
Sbjct: 308 W 308
>pdb|1GJR|A Chain A, Ferredoxin-Nadp+ Reductase Complexed With Nadp+ By
Cocrystallization
Length = 304
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 552 VEAW 555
VE +
Sbjct: 301 VETY 304
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1QUE|A Chain A, X-Ray Structure Of The Ferredoxin:nadp+ Reductase From The
Cyanobacterium Anabaena Pcc 7119 At 1.8 Angstroms
Length = 303
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 244
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 552 VEAW 555
VE +
Sbjct: 300 VETY 303
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 15 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 64
>pdb|1OGJ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 263 Replaced By
Pro (L263p)
Length = 303
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 244
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DQLWQLIKNQKTHTYICGPRG-MEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 552 VEAW 555
VE +
Sbjct: 300 VETY 303
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 15 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 64
>pdb|1QGZ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 78 Replaced By
Asp (L78d)
Length = 295
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEKLRDYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 236
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 552 VEAW 555
VE +
Sbjct: 292 VETY 295
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 7 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 56
>pdb|1EWY|A Chain A, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
pdb|1EWY|B Chain B, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
Length = 303
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 244
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
+W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DELWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 552 VEAW 555
VE +
Sbjct: 300 VETY 303
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 15 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 64
>pdb|1BQE|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly (T155g)
Length = 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPVGKEMLLPDDPEANVIMLAGGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 236
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 552 VEAW 555
VE +
Sbjct: 292 VETY 295
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 7 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 56
>pdb|2X3U|A Chain A, Ferredoxin-Nadp Reductase Mutant With Tyr 303 Replaced By
Phe (Y303f)
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 244
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
+W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DELWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 552 VEAW 555
VE +
Sbjct: 300 VETF 303
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 15 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 64
>pdb|1E62|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Arg (K75r)
Length = 304
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P + R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PERLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 552 VEAW 555
VE +
Sbjct: 301 VETY 304
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1W34|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S)
Length = 304
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 106/243 (43%), Gaps = 31/243 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 552 VEA 554
VE
Sbjct: 301 VET 303
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|2BSA|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Complexed
With Nadp
Length = 303
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 106/243 (43%), Gaps = 31/243 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGATVYGVCSTYLTHIEPGSEV 130
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 244
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 552 VEA 554
VE
Sbjct: 300 VET 302
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 15 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 64
>pdb|1E64|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Gln (K75q)
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P + R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEQLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 552 VEAW 555
VE +
Sbjct: 301 VETY 304
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1QGY|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Glu (K75e)
Length = 295
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P + R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 65 PEELRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 122
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 123 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 181
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 182 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 236
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 237 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 291
Query: 552 VEAW 555
VE +
Sbjct: 292 VETY 295
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 7 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 56
>pdb|1E63|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Ser (K75s)
Length = 304
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PESLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 552 VEAW 555
VE +
Sbjct: 301 VETY 304
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1OGI|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly And Ala 160 Replaced By Thr (T155g-A160t)
Length = 303
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 73 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 130
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG P R ++ R + + A P F
Sbjct: 131 KITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYL-WRMFKDAERAANPEYQFKGFSWL 189
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 190 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 244
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 245 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 299
Query: 552 VEAW 555
VE +
Sbjct: 300 VETY 303
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 15 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 64
>pdb|1H42|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr And Leu 263 Replaced By Pro
(T155g-A160t-L263p)
Length = 304
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG P R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICGPRG-MEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 552 VEAW 555
VE +
Sbjct: 301 VETY 304
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|2BMW|A Chain A, Ferredoxin: Nadp+reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro,
Arg 264 Replaced By Pro And Gly 265 Replaced By Pro
(T155g- A160t-L263p-R264p-G265p)
Length = 304
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG P R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICGPPP-MEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 552 VEAW 555
VE +
Sbjct: 301 VETY 304
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|4AF6|A Chain A, Pea Fnr L268v Mutant
pdb|4AF6|B Chain B, Pea Fnr L268v Mutant
Length = 308
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 330 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 386
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 83 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 142
Query: 387 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 441
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 143 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 199
Query: 442 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 497
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 200 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 254
Query: 498 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 554
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 255 LLKKDNTFVYMCGVKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 307
Query: 555 W 555
+
Sbjct: 308 Y 308
>pdb|1B2R|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: E 301 A)
Length = 304
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 31/244 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG AP R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
++W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DQLWQLIKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 552 VEAW 555
V +
Sbjct: 301 VATY 304
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1QG0|A Chain A, Wild-type Pea Fnr
pdb|1QG0|B Chain B, Wild-type Pea Fnr
Length = 308
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 330 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 386
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 83 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 142
Query: 387 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 441
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 143 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 199
Query: 442 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 497
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 200 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 254
Query: 498 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 554
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 255 LLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 307
Query: 555 W 555
+
Sbjct: 308 Y 308
>pdb|3MHP|A Chain A, Fnr-Recruitment To The Thylakoid
pdb|3MHP|B Chain B, Fnr-Recruitment To The Thylakoid
Length = 296
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 330 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 386
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 70 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 129
Query: 387 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 441
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 130 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 186
Query: 442 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 497
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 187 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 241
Query: 498 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 554
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 242 LLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 294
Query: 555 W 555
+
Sbjct: 295 Y 295
>pdb|4AF7|A Chain A, Pea Fnr C266m Mutant
pdb|4AF7|B Chain B, Pea Fnr C266m Mutant
Length = 308
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 30/241 (12%)
Query: 330 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 386
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 83 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 142
Query: 387 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 441
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 143 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 199
Query: 442 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 497
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 200 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 254
Query: 498 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 554
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 255 LLKKDNTFVYMMGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 307
Query: 555 W 555
+
Sbjct: 308 Y 308
>pdb|2VYQ|A Chain A, Ferredoxin:nadp Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro
And Tyr 303 Replaced By Ser (T155g-A160t-L263p-Y303s)
pdb|2VZL|A Chain A, Ferredoxin-Nadp Reductase (Mutations: T155g, A160t, L263p
And Y303s) Complexed With Nad By Cocrystallization
Length = 304
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 104/243 (42%), Gaps = 31/243 (12%)
Query: 330 PLKTRAFSISSSPLAHPNQVH-LTVSVVSWTTPYKRKRTG-----LCSVWLAGLDPQQGI 383
P K R +SI+S+ H + V T+S+ YK +G +CS +L ++P +
Sbjct: 74 PEKLRLYSIAST--RHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEV 131
Query: 384 YIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF------ 437
I K L P +I++ GTG P R ++ R + + A P F
Sbjct: 132 KITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYL-WRMFKDAERAANPEYQFKGFSWL 190
Query: 438 -FGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ--PQ--KVYVQHKMLEQS 492
FG + LY+E L + A SR+Q PQ ++Y+Q ++ E +
Sbjct: 191 VFGVPTTPNILYKE-----ELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHA 245
Query: 493 QRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 551
+W L+ + K Y+ G M + + +KEG D + K L++AGR+H
Sbjct: 246 DELWQLIKNQKTHTYICGPRG-MEEGIDAALSAAAAKEGVTWSD----YQKDLKKAGRWH 300
Query: 552 VEA 554
VE
Sbjct: 301 VET 303
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 152 YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILP 201
Y A K+I N+PL K G V H +F+ ++Y G + I+P
Sbjct: 16 YRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIP 65
>pdb|1QFY|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFY|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFZ|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadph
pdb|1QFZ|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadph
Length = 308
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 98/240 (40%), Gaps = 30/240 (12%)
Query: 330 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 386
P K R +SI+SS + V L V + +T G+CS +L L P + I
Sbjct: 83 PHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKIT 142
Query: 387 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 441
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 143 GPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAW---LFLGVP 199
Query: 442 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWN 497
LY+E + + A SR+Q +K+Y+Q +M + ++ +W
Sbjct: 200 TSSSLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWE 254
Query: 498 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 554
LL + M + + +K+G +W+ + L++A +++VE
Sbjct: 255 LLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEV 307
>pdb|1B1C|A Chain A, Crystal Structure Of The Fmn-Binding Domain Of Human
Cytochrome P450 Reductase At 1.93a Resolution
Length = 181
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 18 LEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEGALDPWM 77
L GV++AVFGLG+ Y+ FN + K +D RL LGA + E GLGDD E W
Sbjct: 103 LSGVKFAVFGLGNKTYEHFNAMGKYVDKRLEQLGAQRIFELGLGDDD--GNLEEDFITWR 160
Query: 78 RSLW 81
W
Sbjct: 161 EQFW 164
>pdb|2XNC|A Chain A, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
pdb|2XNC|B Chain B, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
Length = 315
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 33/238 (13%)
Query: 330 PLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWF 389
P K R +SI+SS + TVS+ KR G+CS +L L P + I
Sbjct: 98 PHKLRLYSIASSAIGDFGDSK-TVSLC-----VKRVPDGVCSNFLCDLKPGSEVKITGPV 151
Query: 390 QKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCRNED 444
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 152 GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLA---WLFLGVPTSS 208
Query: 445 DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ----PQKVYVQHKMLEQSQRIWNLLL 500
LY+E + + A SR+Q +K+Y+Q +M + ++ +W LL
Sbjct: 209 SLLYKEEFEKMKE-----KAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLK 263
Query: 501 SKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEAW 555
+ M + + +K+G +W+ + L++A +++VE +
Sbjct: 264 KDNTFVYMCGLKGMEKGIDDIMVSLAAKDG-------IDWIEYKRTLKKAEQWNVEVY 314
>pdb|1FNB|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FNC|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FND|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
Length = 314
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 100/242 (41%), Gaps = 32/242 (13%)
Query: 330 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 386
P K R +SI+SS L V L V + +T G+CS +L L P + +
Sbjct: 89 PHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLT 148
Query: 387 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 441
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 205
Query: 442 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 497
LY+E + A SR+Q +K+Y+Q +M + + +W
Sbjct: 206 TSSSLLYKEEFEKMKE-----KAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWE 260
Query: 498 LLLSKASIYVAGSATK-MPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVE 553
+L K + YV K M + + + EG +W+ + L++A +++VE
Sbjct: 261 -MLKKDNTYVYMCGLKGMEKGIDDIMVSLAAAEG-------IDWIEYKRQLKKAEQWNVE 312
Query: 554 AW 555
+
Sbjct: 313 VY 314
>pdb|1BX1|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312q
Length = 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 97/241 (40%), Gaps = 30/241 (12%)
Query: 330 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 386
P K R +SI+SS L V L V + +T G+CS +L L P + +
Sbjct: 89 PHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLT 148
Query: 387 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 441
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 205
Query: 442 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 497
LY+E + A SR+Q +K+Y+Q +M + + +W
Sbjct: 206 TSSSLLYKEEFEKMKE-----KAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWE 260
Query: 498 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 554
+L + + M + + + EG +W+ + L++A +++V+
Sbjct: 261 MLKKDNTYFYMCGLKGMEKGIDDIMVSLAAAEG-------IDWIEYKRQLKKAEQWNVQV 313
Query: 555 W 555
+
Sbjct: 314 Y 314
>pdb|1FRN|A Chain A, The Involvement Of Ser96 In The Catalytic Mechanism Of
Ferredoxin-Nadp+ Reductase: Structure-Function
Relationship As Studied By Site-Directed Mutagenesis And
X- Ray Crystallography
Length = 314
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 30/241 (12%)
Query: 330 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 386
P K R + I+SS L V L V + +T G+CS +L L P + +
Sbjct: 89 PHKLRLYVIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLT 148
Query: 387 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 441
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 205
Query: 442 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 497
LY+E + A SR+Q +K+Y+Q +M + + +W
Sbjct: 206 TSSSLLYKEEFEKMKE-----KAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWE 260
Query: 498 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWL---KALQRAGRYHVEA 554
+L + + M + + + EG +W+ + L++A +++VE
Sbjct: 261 MLKKDNTYFYMCGLKGMEKGIDDIMVSLAAAEG-------IDWIEYKRQLKKAEQWNVEV 313
Query: 555 W 555
+
Sbjct: 314 Y 314
>pdb|1BX0|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312l
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 83/213 (38%), Gaps = 20/213 (9%)
Query: 330 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 386
P K R +SI+SS L V L V + +T G+CS +L L P + +
Sbjct: 89 PHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLT 148
Query: 387 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 441
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 205
Query: 442 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 497
LY+E + A SR+Q +K+Y+Q +M + + +W
Sbjct: 206 TSSSLLYKEEFEKMKE-----KAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWE 260
Query: 498 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEG 530
+L + + M + + + EG
Sbjct: 261 MLKKDNTYFYMCGLKGMEKGIDDIMVSLAAAEG 293
>pdb|1FRQ|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312a
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 83/213 (38%), Gaps = 20/213 (9%)
Query: 330 PLKTRAFSISSSPLAH---PNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIP 386
P K R +SI+SS L V L V + +T G+CS +L L P + +
Sbjct: 89 PHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLT 148
Query: 387 AWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFGCR 441
K L P+ +I++G GTG APFR F+ E+ +G A F G
Sbjct: 149 GPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLA---WLFLGVP 205
Query: 442 NEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQP----QKVYVQHKMLEQSQRIWN 497
LY+E + A SR+Q +K+Y+Q +M + + +W
Sbjct: 206 TSSSLLYKEEFEKMKE-----KAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWE 260
Query: 498 LLLSKASIYVAGSATKMPSDVWSTFEEIVSKEG 530
+L + + M + + + EG
Sbjct: 261 MLKKDNTYFYMCGLKGMEKGIDDIMVSLAAAEG 293
>pdb|2RC5|A Chain A, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|B Chain B, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|C Chain C, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|D Chain D, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC6|A Chain A, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|B Chain B, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|C Chain C, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|D Chain D, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
Length = 314
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 12/169 (7%)
Query: 368 GLCSVWLAGLDPQQGIYIPA-WFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQS 426
G+CS ++ L P + + +K LP S ++ + GTG APF G EE
Sbjct: 132 GVCSNYMCDLKPGDEVTMTGPSGKKFLLPNTDFSGDIMFLATGTGIAPFIGMSEELLEHK 191
Query: 427 SSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQ-----K 481
I +G D+ + + G+ S+ K A SR++ +
Sbjct: 192 LIKFTGNITLVYGAPYSDELVMMDYL------KGLESKHKNFKLITAISREEKNSFDGGR 245
Query: 482 VYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEG 530
+Y+ H++ EQ++ + +L Y+ G M V ++I G
Sbjct: 246 MYISHRVREQAEAVKKILNGGGRFYICGGPKGMEKGVIEEIQKISGNTG 294
>pdb|3HR4|A Chain A, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|C Chain C, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|E Chain E, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|G Chain G, Human Inos Reductase And Calmodulin Complex
Length = 219
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 9 LQKSL--SKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHP 66
L+KSL K+ RYAVFGLG S Y +F A +D +L LGA+ + G GD+
Sbjct: 109 LKKSLFMLKELNNKFRYAVFGLGSSMYPRFCAFAHDIDQKLSHLGASQLTPMGEGDEL-- 166
Query: 67 SGYEGALDPW 76
SG E A W
Sbjct: 167 SGQEDAFRSW 176
>pdb|2B5O|A Chain A, Ferredoxin-nadp Reductase
pdb|2B5O|B Chain B, Ferredoxin-nadp Reductase
Length = 402
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 97/242 (40%), Gaps = 30/242 (12%)
Query: 330 PLKTRAFSISSS---PLAHPNQVHLTVSVVSWTTPYKRKRT-GLCSVWLAGLD-PQQGIY 384
P K R +SI+S+ + V L V + + P + G+CS +L L +
Sbjct: 175 PHKLRLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCNLPVGTDDVK 234
Query: 385 IPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFV-----EERAIQSSSGPAAPIIFFFG 439
I K L ++++ GTG APFR F+ E+ G A I FG
Sbjct: 235 ITGPVGKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLI---FG 291
Query: 440 CRNEDDFLYRELWLSHSL-NDGVFSEAKGGGFYVAFSRKQPQ----KVYVQHKMLEQSQR 494
+ LY++ + + N F A SR+Q KVYVQ ++ E +
Sbjct: 292 VPYTANILYKDDFEKMAAENPDNFR------LTYAISREQKTADGGKVYVQSRVSEYADE 345
Query: 495 IWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVE 553
++ ++ +Y+ G P +E + E E + +++++ R+HVE
Sbjct: 346 LFEMIQKPNTHVYMCGLKGMQPP-----IDETFTAEAEKRGLNWEEMRRSMKKEHRWHVE 400
Query: 554 AW 555
+
Sbjct: 401 VY 402
>pdb|1BVY|F Chain F, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 191
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 2 KVFWRFLLQKSLSKQWLEGVRYAVFGLGD----SGYQKFNFVAKKLDNRLLDLGATAVVE 57
K F +L Q S + ++GVRY+VFG GD + YQK V +D L GA + +
Sbjct: 87 KQFVDWLDQASADE--VKGVRYSVFGCGDKNWATTYQK---VPAFIDETLAAKGAENIAD 141
Query: 58 RGLGDDQHPSGYEGALDPWMRSLW 81
RG D +EG + W +W
Sbjct: 142 RGEAD--ASDDFEGTYEEWREHMW 163
>pdb|1YKG|A Chain A, Solution Structure Of The Flavodoxin-Like Domain From The
Escherichia Coli Sulfite Reductase
Length = 167
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 6 RFLLQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQH 65
+FL K K LE +AVF LGD+ Y+ F K D++L +LG +++R D +
Sbjct: 81 KFLFSKKAPK--LENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVE- 137
Query: 66 PSGYEGALDPWMRSLWRRLHQIDPSFFP 93
Y+ A W + L P P
Sbjct: 138 ---YQAAASEWRARVVDALKSRAPVAAP 162
>pdb|1WSB|A Chain A, Flavodoxin Mutant- S64c
pdb|1WSW|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin
Mutant S64c, Dimer, Semiquinone State
pdb|1XYV|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin
Mutant S64c, Monomer, Semiquinone State
pdb|1XYY|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin
Mutant S64c, Homodimer, Oxidised State
Length = 148
Score = 35.8 bits (81), Expect = 0.068, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12 SLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEG 71
SL + +G + A FG GDS Y+ F ++ +L +LGA +V+ GL D P
Sbjct: 77 SLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGA-EIVQDGLRIDGDPRAARD 135
Query: 72 ALDPW 76
+ W
Sbjct: 136 DIVGW 140
>pdb|1AKW|A Chain A, G61l Oxidized Flavodoxin Mutant
Length = 147
Score = 35.8 bits (81), Expect = 0.068, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12 SLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEG 71
SL + +G + A FG GDS Y+ F ++ +L +LGA +V+ GL D P
Sbjct: 76 SLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGA-EIVQDGLRIDGDPRAARD 134
Query: 72 ALDPW 76
+ W
Sbjct: 135 DIVGW 139
>pdb|1AKT|A Chain A, G61n Oxidized Flavodoxin Mutant
Length = 147
Score = 35.8 bits (81), Expect = 0.068, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12 SLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEG 71
SL + +G + A FG GDS Y+ F ++ +L +LGA +V+ GL D P
Sbjct: 76 SLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGA-EIVQDGLRIDGDPRAARD 134
Query: 72 ALDPW 76
+ W
Sbjct: 135 DIVGW 139
>pdb|1AKR|A Chain A, G61a Oxidized Flavodoxin Mutant
Length = 147
Score = 35.8 bits (81), Expect = 0.068, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12 SLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEG 71
SL + +G + A FG GDS Y+ F ++ +L +LGA +V+ GL D P
Sbjct: 76 SLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGA-EIVQDGLRIDGDPRAARD 134
Query: 72 ALDPW 76
+ W
Sbjct: 135 DIVGW 139
>pdb|1J9G|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin D.
Vulgaris S64c Mutant, Monomer Oxidised, At 2.4 Angstrom
Resolution
Length = 147
Score = 35.8 bits (81), Expect = 0.068, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12 SLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEG 71
SL + +G + A FG GDS Y+ F ++ +L +LGA +V+ GL D P
Sbjct: 76 SLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGA-EIVQDGLRIDGDPRAARD 134
Query: 72 ALDPW 76
+ W
Sbjct: 135 DIVGW 139
>pdb|1J9E|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin D.
Vulgaris S35c Mutant At 1.44 Angstrom Resolution
pdb|1XT6|A Chain A, S35c Flavodoxin Mutant In The Semiquinone State
Length = 147
Score = 35.8 bits (81), Expect = 0.068, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12 SLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEG 71
SL + +G + A FG GDS Y+ F ++ +L +LGA +V+ GL D P
Sbjct: 76 SLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGA-EIVQDGLRIDGDPRAARD 134
Query: 72 ALDPW 76
+ W
Sbjct: 135 DIVGW 139
>pdb|1J8Q|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin D.
Vulgaris Wild-Type At 1.35 Angstrom Resolution
pdb|2FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
pdb|3FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
pdb|4FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
pdb|5FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
Length = 147
Score = 35.8 bits (81), Expect = 0.068, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12 SLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEG 71
SL + +G + A FG GDS Y+ F ++ +L +LGA +V+ GL D P
Sbjct: 76 SLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGA-EIVQDGLRIDGDPRAARD 134
Query: 72 ALDPW 76
+ W
Sbjct: 135 DIVGW 139
>pdb|1FX1|A Chain A, A Crystallographic Structural Study Of The Oxidation
States Of Desulfovibrio Vulgaris Flavodoxin
Length = 148
Score = 35.8 bits (81), Expect = 0.068, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12 SLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEG 71
SL + +G + A FG GDS Y+ F ++ +L +LGA +V+ GL D P
Sbjct: 77 SLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGA-EIVQDGLRIDGDPRAARD 135
Query: 72 ALDPW 76
+ W
Sbjct: 136 DIVGW 140
>pdb|1AZL|A Chain A, G61v Flavodoxin Mutant From Desulfovibrio Vulgaris
Length = 147
Score = 35.8 bits (81), Expect = 0.068, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12 SLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEG 71
SL + +G + A FG GDS Y+ F ++ +L +LGA +V+ GL D P
Sbjct: 76 SLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGA-EIVQDGLRIDGDPRAARD 134
Query: 72 ALDPW 76
+ W
Sbjct: 135 DIVGW 139
>pdb|1BU5|A Chain A, X-Ray Crystal Structure Of The Desulfovibrio Vulgaris
(Hildenborough) Apoflavodoxin-Riboflavin Complex
pdb|1BU5|B Chain B, X-Ray Crystal Structure Of The Desulfovibrio Vulgaris
(Hildenborough) Apoflavodoxin-Riboflavin Complex
Length = 147
Score = 35.8 bits (81), Expect = 0.068, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12 SLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEG 71
SL + +G + A FG GDS Y+ F ++ +L +LGA +V+ GL D P
Sbjct: 76 SLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLKNLGA-EIVQDGLRIDGDPRAARD 134
Query: 72 ALDPW 76
+ W
Sbjct: 135 DIVGW 139
>pdb|1C7E|A Chain A, D95e Hydroquinone Flavodoxin Mutant From D. Vulgaris
pdb|1C7E|B Chain B, D95e Hydroquinone Flavodoxin Mutant From D. Vulgaris
pdb|1C7F|A Chain A, D95e Oxidized Flavodoxin Mutant From D. Vulgaris
pdb|1C7F|B Chain B, D95e Oxidized Flavodoxin Mutant From D. Vulgaris
Length = 147
Score = 33.9 bits (76), Expect = 0.24, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12 SLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEG 71
SL + +G + A FG G+S Y+ F ++ +L +LGA +V+ GL D P
Sbjct: 76 SLEETGAQGRKVACFGCGESSYEYFCGAVDAIEEKLKNLGA-EIVQDGLRIDGDPRAARD 134
Query: 72 ALDPW 76
+ W
Sbjct: 135 DIVGW 139
>pdb|1F4P|A Chain A, Y98w Flavodoxin Mutant 1.5a (D. Vulgaris)
Length = 147
Score = 33.9 bits (76), Expect = 0.25, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12 SLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEG 71
SL + +G + A FG GDS ++ F ++ +L +LGA +V+ GL D P
Sbjct: 76 SLEETGAQGRKVACFGCGDSSWEYFCGAVDAIEEKLKNLGA-EIVQDGLRIDGDPRAARD 134
Query: 72 ALDPW 76
+ W
Sbjct: 135 DIVGW 139
>pdb|1I1O|A Chain A, Room Temperature Crystal Structure Flavodoxin D. Vulgaris
Mutant Y98h At 2.0 Ang. Resolution
Length = 147
Score = 33.5 bits (75), Expect = 0.29, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12 SLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEG 71
SL + +G + A FG GDS ++ F ++ +L +LGA +V+ GL D P
Sbjct: 76 SLEETGAQGRKVACFGCGDSSHEYFCGAVDAIEEKLKNLGA-EIVQDGLRIDGDPRAARD 134
Query: 72 ALDPW 76
+ W
Sbjct: 135 DIVGW 139
>pdb|4HEQ|A Chain A, The Crystal Structure Of Flavodoxin From Desulfovibrio
Gigas
pdb|4HEQ|B Chain B, The Crystal Structure Of Flavodoxin From Desulfovibrio
Gigas
Length = 146
Score = 33.5 bits (75), Expect = 0.33, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 9 LQKSLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSG 68
L + L + L+ + VFG GDS Y F ++ + +LGAT +V L D P
Sbjct: 74 LYEDLDRAGLKDKKVGVFGCGDSSYTYFCGAVDVIEKKAEELGAT-LVASSLKIDGEPDS 132
Query: 69 YEGALDPWMRSLWRRL 84
E LD W R + R+
Sbjct: 133 AE-VLD-WAREVLARV 146
>pdb|1AKQ|A Chain A, D95a Oxidized Flavodoxin Mutant From D. Vulgaris
pdb|1AKU|A Chain A, D95a Hydroquinone Flavodoxin Mutant From D. Vulgaris
pdb|1AKV|A Chain A, D95a Semiquinone Flavodoxin Mutant From D. Vulgaris
Length = 147
Score = 32.7 bits (73), Expect = 0.61, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 12 SLSKQWLEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVERGLGDDQHPSGYEG 71
SL + +G + A FG G S Y+ F ++ +L +LGA +V+ GL D P
Sbjct: 76 SLEETGAQGRKVACFGCGASSYEYFCGAVDAIEEKLKNLGA-EIVQDGLRIDGDPRAARD 134
Query: 72 ALDPW 76
+ W
Sbjct: 135 DIVGW 139
>pdb|1MQS|A Chain A, Crystal Structure Of Sly1p In Complex With An N-Terminal
Peptide Of Sed5p
Length = 671
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 24/139 (17%)
Query: 151 NYNNKAVCFLKMIKNQP-LTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVD 209
N NN V +++K P LT + D H F + + +E + ++D
Sbjct: 377 NSNNDTVQIQEVVKKLPELTAKKNTIDTHXNIFAALLSQLESK--------------SLD 422
Query: 210 TFIQRCNLDPDALITVQHKEMKNYLPDIHKN--TTEVPIKLRTFVELTMDVTSASPRRYF 267
TF + DP + T ++ DI K+ T + KLR+F+ L + T+ P+ +
Sbjct: 423 TFFE-VEQDPGSTKT------RSRFLDILKDGKTNNLEDKLRSFIVLYLTSTTGLPKDFV 475
Query: 268 FEVMSYFATAEHEKERLQY 286
V +YF +++ L+Y
Sbjct: 476 QNVENYFKENDYDINALKY 494
>pdb|2KQ9|A Chain A, Solution Structure Of Dnak Suppressor Protein From
Agrobacterium Tumefaciens C58. Northeast Structural
Genomics Consortium Target Att12ONTARIO CENTER FOR
STRUCTURAL PROTEOMICS TARGET ATC0888
Length = 112
Score = 32.0 bits (71), Expect = 0.92, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 16/81 (19%)
Query: 61 GDDQHPSGYEGALDPWMRSLWRRLHQIDPSF-FPQGP-----------DHVIEEMKLIDQ 108
G + YE L R L+RRLH+I+ F P+ P D V++E+ + Q
Sbjct: 4 GKSMNVESYEKILRDRQRELYRRLHKIEADFEEPRNPDDEDRASERSNDEVLDELGQVGQ 63
Query: 109 PKVHITYHSIDNAASRLSNAS 129
++ +ID A +R+++ +
Sbjct: 64 DEL----RAIDAALARIASGT 80
>pdb|2INY|A Chain A, Nanoporous Crystals Of Chicken Embryo Lethal Orphan (celo)
Adenovirus Major Coat Protein, Hexon
Length = 942
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 254 LTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVL 308
LT D+T+A+PR +F + T E+ E LQ F S G + K R+TV+
Sbjct: 4 LTPDLTTATPRLQYFHIAGP-GTREYLSEDLQQFISATGS--YFDLKNKFRQTVV 55
>pdb|3F6R|A Chain A, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin
pdb|3F6R|B Chain B, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin
pdb|3F6R|C Chain C, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin
pdb|3F6R|D Chain D, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin
pdb|3F6S|A Chain A, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F6S|B Chain B, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F6S|D Chain D, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F6S|E Chain E, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F6S|F Chain F, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F6S|H Chain H, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F6S|I Chain I, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F6S|G Chain G, Desulfovibrio Desulfuricans (Atcc 29577) Oxidized
Flavodoxin Alternate Conformers
pdb|3F90|A Chain A, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
pdb|3F90|B Chain B, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
pdb|3F90|D Chain D, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
pdb|3F90|E Chain E, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
pdb|3F90|F Chain F, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
pdb|3F90|H Chain H, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
pdb|3F90|I Chain I, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
pdb|3F90|G Chain G, Desulfovibrio Desulfuricans (Atcc 29577) Semiquinone
Flavodoxin
Length = 148
Score = 29.3 bits (64), Expect = 5.2, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 18 LEGVRYAVFGLGDSGYQKFNFVAKKLDNRLLDLGATAVVE 57
L G + A F GD Y+ F ++ R +LGAT + E
Sbjct: 83 LAGRKVAAFASGDQEYEHFCGAVPAIEERAKELGATIIAE 122
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,412,963
Number of Sequences: 62578
Number of extensions: 752091
Number of successful extensions: 2128
Number of sequences better than 100.0: 107
Number of HSP's better than 100.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1844
Number of HSP's gapped (non-prelim): 148
length of query: 556
length of database: 14,973,337
effective HSP length: 104
effective length of query: 452
effective length of database: 8,465,225
effective search space: 3826281700
effective search space used: 3826281700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)