Your job contains 1 sequence.
>008735
MPSVAEGEVSNSTHNPKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDIL
IIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPRRVAAVTVAKRVAEESGVELGQRVG
YSIRFDDRTSTSTRIKEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSA
DGHSNGNNNNENSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGC
AKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVER
LVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGI
KYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKL
EDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCK
LSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKC
NEIFCKSRWRSPHFD
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008735
(555 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2197965 - symbol:AT1G26370 species:3702 "Arabi... 1872 3.1e-193 1
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 903 1.5e-125 2
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 846 4.9e-122 3
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 846 1.4e-120 2
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 846 4.6e-120 2
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 846 4.8e-120 2
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 846 6.5e-120 2
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 846 8.4e-120 2
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 846 9.4e-120 2
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 846 1.1e-119 2
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 846 1.1e-119 2
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 846 1.4e-119 2
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 840 1.5e-119 2
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 820 5.4e-118 2
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 849 6.1e-118 2
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 838 1.6e-117 2
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 835 4.0e-117 2
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 835 4.0e-117 2
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 822 6.8e-117 2
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 818 6.8e-117 2
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 843 1.8e-116 2
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 833 3.7e-116 2
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 817 3.7e-116 2
MGI|MGI:2445102 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) bo... 819 1.3e-115 2
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 802 2.6e-115 2
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 790 2.0e-114 2
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 799 2.7e-114 2
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 807 3.8e-114 2
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 824 4.6e-114 2
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 806 6.1e-114 2
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 788 7.8e-114 2
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 783 7.8e-114 2
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 783 7.8e-114 2
UNIPROTKB|Q9H6R0 - symbol:DHX33 "Putative ATP-dependent R... 801 9.9e-114 2
UNIPROTKB|F1MWZ4 - symbol:F1MWZ4 "Uncharacterized protein... 808 3.4e-113 2
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 809 4.2e-112 2
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 809 4.2e-112 2
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 796 6.2e-112 2
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 796 1.3e-111 2
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 796 1.3e-111 2
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 795 1.6e-111 2
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 794 1.6e-111 2
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 796 2.1e-111 2
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 782 8.3e-111 2
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 784 3.9e-110 2
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 787 8.0e-110 2
UNIPROTKB|F1PRA1 - symbol:DHX33 "Uncharacterized protein"... 814 1.3e-109 2
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 766 1.7e-109 2
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 766 4.4e-109 2
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 766 4.4e-109 2
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 771 5.5e-109 2
UNIPROTKB|E2RQN1 - symbol:DHX35 "Uncharacterized protein"... 760 5.6e-109 2
UNIPROTKB|E2RQN7 - symbol:DHX35 "Uncharacterized protein"... 760 5.6e-109 2
ASPGD|ASPL0000052850 - symbol:AN1363 species:162425 "Emer... 740 7.1e-109 2
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 759 9.1e-109 2
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 768 1.9e-108 2
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 751 5.0e-108 2
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 763 7.5e-108 2
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 763 7.5e-108 2
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 774 2.7e-107 2
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 769 2.7e-107 2
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 750 5.7e-107 2
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 750 5.7e-107 2
UNIPROTKB|E1C4U5 - symbol:DHX35 "Uncharacterized protein"... 746 5.7e-107 2
ASPGD|ASPL0000001852 - symbol:AN6085 species:162425 "Emer... 687 5.8e-107 4
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 751 1.9e-106 2
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 724 4.4e-106 3
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 750 6.5e-106 2
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 750 6.6e-106 2
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 748 8.7e-106 2
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 734 7.3e-105 2
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 769 1.5e-104 2
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 751 2.5e-104 2
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 722 2.5e-104 2
SGD|S000005294 - symbol:PRP2 "RNA-dependent ATPase in the... 722 2.5e-104 2
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 699 4.0e-104 2
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 745 7.4e-103 2
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 731 7.4e-103 2
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 731 1.5e-102 2
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 739 1.4e-101 2
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 738 3.6e-101 2
FB|FBgn0031631 - symbol:CG3225 species:7227 "Drosophila m... 693 9.1e-101 3
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 734 1.2e-100 2
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 734 1.2e-100 2
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 734 1.2e-100 2
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 734 1.2e-100 2
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 734 1.2e-100 2
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 734 1.2e-100 2
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 719 1.4e-99 2
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 734 2.3e-99 2
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 734 2.3e-99 2
UNIPROTKB|F5GXM6 - symbol:DHX35 "Probable ATP-dependent R... 766 4.7e-99 2
WB|WBGene00022056 - symbol:Y67D2.6 species:6239 "Caenorha... 696 4.7e-99 2
FB|FBgn0032194 - symbol:CG4901 species:7227 "Drosophila m... 653 1.8e-97 2
GENEDB_PFALCIPARUM|PFL1525c - symbol:PFL1525c "pre-mRNA s... 469 5.6e-97 3
UNIPROTKB|Q8I5A4 - symbol:PFL1525c "Pre-mRNA splicing fac... 469 5.6e-97 3
UNIPROTKB|F1MVJ1 - symbol:DHX38 "Pre-mRNA-splicing factor... 662 1.2e-96 2
UNIPROTKB|I3L1L6 - symbol:DHX33 "Putative ATP-dependent R... 801 1.1e-95 2
TAIR|locus:2010549 - symbol:AT1G27900 species:3702 "Arabi... 646 1.4e-95 2
GENEDB_PFALCIPARUM|MAL13P1.322 - symbol:MAL13P1.322 "spli... 514 9.1e-95 3
WARNING: Descriptions of 213 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 1872 (664.0 bits), Expect = 3.1e-193, P = 3.1e-193
Identities = 389/554 (70%), Positives = 443/554 (79%)
Query: 1 MPSVAEGE----VSNSTHNPKLHS-KPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVR 55
MPS+A+GE V NS NPK + PF S RQKI + R+SLPIASVEKRLVEEV+
Sbjct: 1 MPSMAQGELKSFVQNSRPNPKSPTVSPF-----SMRQKIAEHRRSLPIASVEKRLVEEVQ 55
Query: 56 KNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVEL 115
KNDILIIVGETGSGKTTQLPQFL++AGFCR+GK+IG+TQP EE V+L
Sbjct: 56 KNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGITQPRRIAAVTVAKRVAEECEVQL 115
Query: 116 GQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLL 166
GQ+VGYSIRFDD TS STR+K EALLDP+LSRYS IIVDEAH+R+VHTDVLL
Sbjct: 116 GQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHLSRYSVIIVDEAHDRSVHTDVLL 175
Query: 167 GLLKKVQNARS-----KSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLK 221
LLKK+Q RS K+ G+ D G NG+ LK QGRK +PLK
Sbjct: 176 ALLKKIQRTRSQPVSEKTEFGNVASQVQTTTRDA---NGPQQNGV--LKGYQGRKLSPLK 230
Query: 222 LIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEA 281
LIIMSASLDAR FSEYFG AKAVHVQGRQFPV+ILYT++PE DY+DATL+TIFQ+H +E
Sbjct: 231 LIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDYVDATLVTIFQIHFEEK 290
Query: 282 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGF 341
PGDILVFLTGQ+EIESVERLVQERL +PE RKL+ + IFS+LPSEQQM+VFAPA GF
Sbjct: 291 PGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSALPSEQQMKVFAPAPTGF 350
Query: 342 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 401
RKVILATNIAETS+TIPGI+YVIDPGFVKAR YDP KGMESL VVP SKAQ LQRSGRAG
Sbjct: 351 RKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQRSGRAG 410
Query: 402 REGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRAS 461
REGPGK FRLYPE EF+KLEDSTKPEIKRCNLSN+ILQLKALG+DDI+GFDF++KPSR +
Sbjct: 411 REGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKALGIDDIVGFDFIDKPSRGA 470
Query: 462 IIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAML 521
IIK+L +L LGAL DD KL +PVG+QM+RLPL+P+YSKALI+A QFNCLEEMLITVA+L
Sbjct: 471 IIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSKALILANQFNCLEEMLITVAVL 530
Query: 522 SVESIFFRSPGEVR 535
SVESIF+ P E R
Sbjct: 531 SVESIFY-DPREKR 543
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 903 (322.9 bits), Expect = 1.5e-125, Sum P(2) = 1.5e-125
Identities = 186/342 (54%), Positives = 256/342 (74%)
Query: 209 LKQCQGR--KFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYL 266
LK Q R K PLK+IIMSA+LDA FS+YF A ++++GRQFPV+I YT + DY+
Sbjct: 209 LKSIQKRREKKNPLKIIIMSATLDAELFSQYFNNAPVLYIEGRQFPVQIYYTEEIQKDYV 268
Query: 267 DATLITIFQVHL------------DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASR 314
DA LIT+ Q+H+ +E GDILVFLTG++EIE++E+L+ +R+ +LP S+
Sbjct: 269 DAALITVLQIHIAHLTDKSINKEEEEDGGDILVFLTGRDEIENLEKLLLDRIPRLPVGSK 328
Query: 315 KLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLY 374
L+ PIFS+LP EQQM+VF A G RKVILATNIAETS+TI GI+YV+D G VK++++
Sbjct: 329 DLIVCPIFSALPQEQQMKVFEKAPKGSRKVILATNIAETSLTINGIRYVVDSGAVKSKIF 388
Query: 375 DPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLS 434
+P G++SL ++PISKA A QR+GRAGRE GKC+RLY + F+KL+ S+ PEIKR N++
Sbjct: 389 NPKIGIDSLNIIPISKASAKQRTGRAGREFEGKCYRLYTQETFEKLDTSSIPEIKRSNIA 448
Query: 435 NVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPL 494
NVILQLK +G++DI+ FDF+E P AS+IKSLE LF L A++D+ L++ +G +MA PL
Sbjct: 449 NVILQLKTIGINDILSFDFLESPPVASVIKSLELLFCLDAISDNGSLTE-LGKKMALFPL 507
Query: 495 DPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRR 536
DP+YSK LI + +F C EE+LI +++LSVESIFF +P E ++
Sbjct: 508 DPMYSKTLIKSIEFECSEEVLIIISILSVESIFF-TPKEKKK 548
Score = 351 (128.6 bits), Expect = 1.5e-125, Sum P(2) = 1.5e-125
Identities = 73/180 (40%), Positives = 111/180 (61%)
Query: 8 EVSNSTHNPKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETG 67
++SN N + K ++I Q++SLP+ + + L++ +++ +II+ ETG
Sbjct: 40 QISNDKINDNNNLKNQLEIPKEIPKEIKLQKESLPVFTAKDALLKNFKEHSTVIIISETG 99
Query: 68 SGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD 127
+GKTTQ+PQ+L+ G+ +D +I +TQP +E GVELG +VGY +RFDD
Sbjct: 100 TGKTTQIPQYLYENGY-KDNGIIAITQPRRVAAVSISKRVSQEMGVELGDQVGYCVRFDD 158
Query: 128 RTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 178
+T+ T++K EA+LD LS+YS II+DEAHERT++TDVL GLLK +Q R K
Sbjct: 159 KTNEKTKLKYMTDGMLVREAMLDSSLSKYSVIILDEAHERTLNTDVLFGLLKSIQKRREK 218
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 846 (302.9 bits), Expect = 4.9e-122, Sum P(3) = 4.9e-122
Identities = 164/316 (51%), Positives = 232/316 (73%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+K +KLI+ SA+LDA FS+YF A + GR +PVE+LYT PE DYLDA+LIT+
Sbjct: 696 QKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEVLYTKEPETDYLDASLITVM 755
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 756 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 815
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+V PIS+AQA
Sbjct: 816 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 875
Query: 395 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+G++D++ FDF
Sbjct: 876 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 935
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
M+ P ++I ++EQL+ LGAL D+ L+ +G +MA PL+P+ K LI++ C EE
Sbjct: 936 MDAPPMETLITAMEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEE 994
Query: 514 MLITVAMLSVESIFFR 529
ML V+MLSV+++F+R
Sbjct: 995 MLTIVSMLSVQNVFYR 1010
Score = 359 (131.4 bits), Expect = 4.9e-122, Sum P(3) = 4.9e-122
Identities = 78/153 (50%), Positives = 100/153 (65%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
IL+QR+SLPI ++++L++ V N ILI++GETGSGKTTQ+ Q+L AG+ GK IG T
Sbjct: 548 ILEQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGK-IGCT 606
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 144
QP EE G LGQ VGY+IRF+D TS T IK E L+DP L
Sbjct: 607 QPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDL 666
Query: 145 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
+Y+ I++DEAHERT+HTDVL GLLKK R+
Sbjct: 667 GQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRT 699
Score = 38 (18.4 bits), Expect = 4.9e-122, Sum P(3) = 4.9e-122
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 1 MPSVAEGEVSNSTHNPKLHS 20
MPSV+ E S+S H + S
Sbjct: 142 MPSVSGTEPSSSKHRSETSS 161
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 846 (302.9 bits), Expect = 1.4e-120, Sum P(2) = 1.4e-120
Identities = 165/316 (52%), Positives = 232/316 (73%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE DYLDA+LIT+
Sbjct: 706 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 765
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 766 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 825
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+V PIS+AQA
Sbjct: 826 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 885
Query: 395 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+G++D++ FDF
Sbjct: 886 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 945
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
M+ P ++I ++EQL+ LGAL D+ L+ +G +MA PL+P+ K LI++ C EE
Sbjct: 946 MDAPPMETLITAMEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEE 1004
Query: 514 MLITVAMLSVESIFFR 529
ML V+MLSV+++F+R
Sbjct: 1005 MLTIVSMLSVQNVFYR 1020
Score = 361 (132.1 bits), Expect = 1.4e-120, Sum P(2) = 1.4e-120
Identities = 79/155 (50%), Positives = 101/155 (65%)
Query: 31 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 90
+ IL+QR+SLPI ++++LV+ V N ILI++GETGSGKTTQ+ Q+L AG+ GK I
Sbjct: 555 QMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-I 613
Query: 91 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 141
G TQP EE G LGQ VGY+IRF+D TS T IK E L+D
Sbjct: 614 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 673
Query: 142 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
P L++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 674 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 708
Score = 38 (18.4 bits), Expect = 1.8e-86, Sum P(2) = 1.8e-86
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLP 75
+ SL + V++ E++ N +VGET + + P
Sbjct: 330 KTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSMRNP 367
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 846 (302.9 bits), Expect = 4.6e-120, Sum P(2) = 4.6e-120
Identities = 165/316 (52%), Positives = 232/316 (73%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE DYLDA+LIT+
Sbjct: 654 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 713
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 714 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 773
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+V PIS+AQA
Sbjct: 774 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 833
Query: 395 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+G++D++ FDF
Sbjct: 834 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 893
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
M+ P ++I ++EQL+ LGAL D+ L+ +G +MA PL+P+ K LI++ C EE
Sbjct: 894 MDAPPMETLITAMEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEE 952
Query: 514 MLITVAMLSVESIFFR 529
ML V+MLSV+++F+R
Sbjct: 953 MLTIVSMLSVQNVFYR 968
Score = 356 (130.4 bits), Expect = 4.6e-120, Sum P(2) = 4.6e-120
Identities = 77/152 (50%), Positives = 100/152 (65%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
I++QR+SLPI ++++L++ V N ILI++GETGSGKTTQ+ Q+L AG+ GK IG T
Sbjct: 506 IIEQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCT 564
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 144
QP EE G LGQ VGY+IRF+D TS T IK E L+DP L
Sbjct: 565 QPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDL 624
Query: 145 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 625 TQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 656
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 846 (302.9 bits), Expect = 4.8e-120, Sum P(2) = 4.8e-120
Identities = 165/316 (52%), Positives = 232/316 (73%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE DYLDA+LIT+
Sbjct: 675 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 734
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 735 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 794
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+V PIS+AQA
Sbjct: 795 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 854
Query: 395 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+G++D++ FDF
Sbjct: 855 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 914
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
M+ P ++I ++EQL+ LGAL D+ L+ +G +MA PL+P+ K LI++ C EE
Sbjct: 915 MDAPPMETLITAMEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEE 973
Query: 514 MLITVAMLSVESIFFR 529
ML V+MLSV+++F+R
Sbjct: 974 MLTIVSMLSVQNVFYR 989
Score = 361 (132.1 bits), Expect = 4.8e-120, Sum P(2) = 4.8e-120
Identities = 79/155 (50%), Positives = 101/155 (65%)
Query: 31 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 90
+ IL+QR+SLPI ++++LV+ V N ILI++GETGSGKTTQ+ Q+L AG+ GK I
Sbjct: 524 QMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-I 582
Query: 91 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 141
G TQP EE G LGQ VGY+IRF+D TS T IK E L+D
Sbjct: 583 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 642
Query: 142 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
P L++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 643 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 677
Score = 38 (18.4 bits), Expect = 6.0e-86, Sum P(2) = 6.0e-86
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLP 75
+ SL + V++ E++ N +VGET + + P
Sbjct: 299 KTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSMRNP 336
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 846 (302.9 bits), Expect = 6.5e-120, Sum P(2) = 6.5e-120
Identities = 165/316 (52%), Positives = 232/316 (73%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE DYLDA+LIT+
Sbjct: 706 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 765
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 766 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 825
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+V PIS+AQA
Sbjct: 826 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 885
Query: 395 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+G++D++ FDF
Sbjct: 886 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 945
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
M+ P ++I ++EQL+ LGAL D+ L+ +G +MA PL+P+ K LI++ C EE
Sbjct: 946 MDAPPMETLITAMEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEE 1004
Query: 514 MLITVAMLSVESIFFR 529
ML V+MLSV+++F+R
Sbjct: 1005 MLTIVSMLSVQNVFYR 1020
Score = 361 (132.1 bits), Expect = 6.5e-120, Sum P(2) = 6.5e-120
Identities = 79/155 (50%), Positives = 101/155 (65%)
Query: 31 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 90
+ IL+QR+SLPI ++++LV+ V N ILI++GETGSGKTTQ+ Q+L AG+ GK I
Sbjct: 555 QMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-I 613
Query: 91 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 141
G TQP EE G LGQ VGY+IRF+D TS T IK E L+D
Sbjct: 614 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 673
Query: 142 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
P L++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 674 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 708
Score = 38 (18.4 bits), Expect = 8.0e-86, Sum P(2) = 8.0e-86
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLP 75
+ SL + V++ E++ N +VGET + + P
Sbjct: 330 KTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSMRNP 367
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 846 (302.9 bits), Expect = 8.4e-120, Sum P(2) = 8.4e-120
Identities = 165/316 (52%), Positives = 232/316 (73%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE DYLDA+LIT+
Sbjct: 698 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 757
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 758 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 817
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+V PIS+AQA
Sbjct: 818 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 877
Query: 395 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+G++D++ FDF
Sbjct: 878 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 937
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
M+ P ++I ++EQL+ LGAL D+ L+ +G +MA PL+P+ K LI++ C EE
Sbjct: 938 MDAPPMETLITAMEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEE 996
Query: 514 MLITVAMLSVESIFFR 529
ML V+MLSV+++F+R
Sbjct: 997 MLTIVSMLSVQNVFYR 1012
Score = 359 (131.4 bits), Expect = 8.4e-120, Sum P(2) = 8.4e-120
Identities = 78/155 (50%), Positives = 101/155 (65%)
Query: 31 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 90
+ I++QR+SLPI ++++LV+ V N ILI++GETGSGKTTQ+ Q+L AG+ GK I
Sbjct: 547 QMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-I 605
Query: 91 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 141
G TQP EE G LGQ VGY+IRF+D TS T IK E L+D
Sbjct: 606 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 665
Query: 142 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
P L++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 666 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 700
Score = 38 (18.4 bits), Expect = 6.4e-86, Sum P(2) = 6.4e-86
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLP 75
+ SL + V++ E++ N +VGET + + P
Sbjct: 322 KTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSMRNP 359
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 846 (302.9 bits), Expect = 9.4e-120, Sum P(2) = 9.4e-120
Identities = 165/316 (52%), Positives = 232/316 (73%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE DYLDA+LIT+
Sbjct: 702 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 761
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 762 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 821
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+V PIS+AQA
Sbjct: 822 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 881
Query: 395 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+G++D++ FDF
Sbjct: 882 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 941
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
M+ P ++I ++EQL+ LGAL D+ L+ +G +MA PL+P+ K LI++ C EE
Sbjct: 942 MDAPPMETLITAMEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEE 1000
Query: 514 MLITVAMLSVESIFFR 529
ML V+MLSV+++F+R
Sbjct: 1001 MLTIVSMLSVQNVFYR 1016
Score = 359 (131.4 bits), Expect = 9.4e-120, Sum P(2) = 9.4e-120
Identities = 78/155 (50%), Positives = 101/155 (65%)
Query: 31 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 90
+ I++QR+SLPI ++++LV+ V N ILI++GETGSGKTTQ+ Q+L AG+ GK I
Sbjct: 551 QMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-I 609
Query: 91 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 141
G TQP EE G LGQ VGY+IRF+D TS T IK E L+D
Sbjct: 610 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 669
Query: 142 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
P L++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 670 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 704
Score = 38 (18.4 bits), Expect = 7.2e-86, Sum P(2) = 7.2e-86
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLP 75
+ SL + V++ E++ N +VGET + + P
Sbjct: 326 KTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSMRNP 363
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 846 (302.9 bits), Expect = 1.1e-119, Sum P(2) = 1.1e-119
Identities = 165/316 (52%), Positives = 232/316 (73%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE DYLDA+LIT+
Sbjct: 728 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 787
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 788 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 847
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+V PIS+AQA
Sbjct: 848 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 907
Query: 395 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+G++D++ FDF
Sbjct: 908 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 967
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
M+ P ++I ++EQL+ LGAL D+ L+ +G +MA PL+P+ K LI++ C EE
Sbjct: 968 MDAPPMETLITAMEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEE 1026
Query: 514 MLITVAMLSVESIFFR 529
ML V+MLSV+++F+R
Sbjct: 1027 MLTIVSMLSVQNVFYR 1042
Score = 361 (132.1 bits), Expect = 1.1e-119, Sum P(2) = 1.1e-119
Identities = 79/155 (50%), Positives = 101/155 (65%)
Query: 31 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 90
+ IL+QR+SLPI ++++LV+ V N ILI++GETGSGKTTQ+ Q+L AG+ GK I
Sbjct: 577 QMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-I 635
Query: 91 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 141
G TQP EE G LGQ VGY+IRF+D TS T IK E L+D
Sbjct: 636 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 695
Query: 142 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
P L++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 696 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 730
Score = 38 (18.4 bits), Expect = 1.4e-85, Sum P(2) = 1.4e-85
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLP 75
+ SL + V++ E++ N +VGET + + P
Sbjct: 352 KTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSMRNP 389
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 846 (302.9 bits), Expect = 1.1e-119, Sum P(2) = 1.1e-119
Identities = 165/316 (52%), Positives = 232/316 (73%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE DYLDA+LIT+
Sbjct: 730 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 789
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 790 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 849
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+V PIS+AQA
Sbjct: 850 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 909
Query: 395 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+G++D++ FDF
Sbjct: 910 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 969
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
M+ P ++I ++EQL+ LGAL D+ L+ +G +MA PL+P+ K LI++ C EE
Sbjct: 970 MDAPPMETLITAMEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEE 1028
Query: 514 MLITVAMLSVESIFFR 529
ML V+MLSV+++F+R
Sbjct: 1029 MLTIVSMLSVQNVFYR 1044
Score = 361 (132.1 bits), Expect = 1.1e-119, Sum P(2) = 1.1e-119
Identities = 79/155 (50%), Positives = 101/155 (65%)
Query: 31 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 90
+ IL+QR+SLPI ++++LV+ V N ILI++GETGSGKTTQ+ Q+L AG+ GK I
Sbjct: 579 QMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-I 637
Query: 91 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 141
G TQP EE G LGQ VGY+IRF+D TS T IK E L+D
Sbjct: 638 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 697
Query: 142 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
P L++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 698 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 732
Score = 38 (18.4 bits), Expect = 1.4e-85, Sum P(2) = 1.4e-85
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLP 75
+ SL + V++ E++ N +VGET + + P
Sbjct: 354 KTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSMRNP 391
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 846 (302.9 bits), Expect = 1.4e-119, Sum P(2) = 1.4e-119
Identities = 165/316 (52%), Positives = 232/316 (73%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE DYLDA+LIT+
Sbjct: 716 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 775
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 776 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 835
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+V PIS+AQA
Sbjct: 836 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 895
Query: 395 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+G++D++ FDF
Sbjct: 896 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 955
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
M+ P ++I ++EQL+ LGAL D+ L+ +G +MA PL+P+ K LI++ C EE
Sbjct: 956 MDAPPMETLITAMEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIMSVHLGCSEE 1014
Query: 514 MLITVAMLSVESIFFR 529
ML V+MLSV+++F+R
Sbjct: 1015 MLTIVSMLSVQNVFYR 1030
Score = 359 (131.4 bits), Expect = 1.4e-119, Sum P(2) = 1.4e-119
Identities = 78/155 (50%), Positives = 101/155 (65%)
Query: 31 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 90
+ I++QR+SLPI ++++LV+ V N ILI++GETGSGKTTQ+ Q+L AG+ GK I
Sbjct: 565 QMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-I 623
Query: 91 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 141
G TQP EE G LGQ VGY+IRF+D TS T IK E L+D
Sbjct: 624 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 683
Query: 142 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
P L++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 684 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 718
Score = 38 (18.4 bits), Expect = 1.0e-85, Sum P(2) = 1.0e-85
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLP 75
+ SL + V++ E++ N +VGET + + P
Sbjct: 340 KTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSMRNP 377
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 840 (300.8 bits), Expect = 1.5e-119, Sum P(2) = 1.5e-119
Identities = 170/315 (53%), Positives = 228/315 (72%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LKLI+ SA+LDA FS YF + GR +PVEI+YT PE DYLDA L+T+ Q+HL
Sbjct: 657 LKLIVTSATLDAERFSSYFYKCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLS 716
Query: 280 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 339
E PGDILVFLTGQEEI++ ++ ER L ++ +LV +P++S+LPSE Q R+F PA
Sbjct: 717 EGPGDILVFLTGQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPP 776
Query: 340 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGR 399
G RKV++ATNIAETS+TI GI YV+DPGFVK +DP GM+SL+V PIS+AQA QRSGR
Sbjct: 777 GGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGR 836
Query: 400 AGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPS 458
AGR GPGKC+RLY E+ + +++ S PEI+R NLS+ IL LKA+G++D++ FDFM+ P
Sbjct: 837 AGRTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPP 896
Query: 459 RASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITV 518
++I +L+ L+ L AL D+ L+ P+G +MA P++P SK LI + + C EEML +
Sbjct: 897 AQTMIAALQNLYALSALDDEGLLT-PLGRKMADFPMEPQLSKVLITSVELGCSEEMLSII 955
Query: 519 AMLSVESIFFRSPGE 533
AMLSV +I+ R P E
Sbjct: 956 AMLSVPNIWSR-PRE 969
Score = 357 (130.7 bits), Expect = 1.5e-119, Sum P(2) = 1.5e-119
Identities = 73/144 (50%), Positives = 95/144 (65%)
Query: 36 QQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQP 95
+QR+ LP+ + K+ +E V KN IL+++GETGSGKTTQ+ Q+L G+ D K+IG TQP
Sbjct: 505 EQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQP 564
Query: 96 XXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSR 146
EE G +G+ VGY+IRF+D+TS T+IK E L+DP LS+
Sbjct: 565 RRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLLSK 624
Query: 147 YSAIIVDEAHERTVHTDVLLGLLK 170
YS II+DEAHERTV TDVL GLLK
Sbjct: 625 YSVIILDEAHERTVATDVLFGLLK 648
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 820 (293.7 bits), Expect = 5.4e-118, Sum P(2) = 5.4e-118
Identities = 171/348 (49%), Positives = 241/348 (69%)
Query: 209 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDA 268
LK+ R+ LK+I+ SA+LDA FS YF + GR FPVEILY+ PE DYLDA
Sbjct: 678 LKKATRRR-PDLKIIVTSATLDADKFSAYFNECPIFTIPGRTFPVEILYSKDPESDYLDA 736
Query: 269 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 328
L T+ Q+H+DE PGDIL+FLTGQEEI++ ++ ER+ L + +L+ +P++S+LP+E
Sbjct: 737 ALTTVMQIHIDEPPGDILLFLTGQEEIDTSCEILFERMKALGPSVPELIILPVYSALPNE 796
Query: 329 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 388
Q R+F PA G RKV++ATNIAETS+TI I YV+DPGFVK YDP GM+SL+V PI
Sbjct: 797 MQSRIFDPAPPGSRKVVIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVVTPI 856
Query: 389 SKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDD 447
S+AQA QR+GRAGR GPGKCFRLY E + ++ ++ PEI+R NLSN IL LKA+G++D
Sbjct: 857 SQAQANQRAGRAGRTGPGKCFRLYTEAAYQTEMLPTSIPEIQRQNLSNTILLLKAMGIND 916
Query: 448 IIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQ 507
++ FDFM+ P +++ +LE+L+ L AL D+ L+ +G +MA P++P SK LI + +
Sbjct: 917 LLHFDFMDPPPINTMLTALEELYALSALDDEGLLTR-LGRKMADFPMEPSLSKVLIASVE 975
Query: 508 FNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIFCKSRWRSPHFD 555
C +EML VAML++ ++F+R P E K+ K+++ P+ D
Sbjct: 976 MRCSDEMLSIVAMLNLPNVFYR-PKE----KQTQADAKKAKFHDPNGD 1018
Score = 371 (135.7 bits), Expect = 5.4e-118, Sum P(2) = 5.4e-118
Identities = 82/163 (50%), Positives = 105/163 (64%)
Query: 25 NDSSSRRQK--ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAG 82
N S +R I QQR+SLP+ + ++L++ V++N I+I+VGETGSGKTTQL Q+L AG
Sbjct: 524 NQSFGKRTNMTIKQQRESLPVFAFREQLIKAVKENQIMIVVGETGSGKTTQLTQYLAEAG 583
Query: 83 FCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK------ 136
F +G +IG TQP EE G ELGQ VGY+IRF+D TS +TRIK
Sbjct: 584 FANEG-VIGCTQPRRVAAMSVAKRVSEEVGCELGQEVGYTIRFEDCTSPATRIKYMTDGM 642
Query: 137 ---EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
E ++DP L RYS I++DEAHERT+ TDVL LLKK R
Sbjct: 643 LQREIVIDPDLKRYSVIMLDEAHERTIATDVLFALLKKATRRR 685
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 849 (303.9 bits), Expect = 6.1e-118, Sum P(2) = 6.1e-118
Identities = 174/338 (51%), Positives = 243/338 (71%)
Query: 220 LKLIIMSASLDARGFSEYF-GCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHL 278
L+LI+ SA+LDA FSEYF GC + GR FPVEI+Y+ PE DYLDA LIT+ Q+HL
Sbjct: 723 LRLIVTSATLDADKFSEYFYGCP-IFSIPGRTFPVEIMYSKEPESDYLDAALITVMQIHL 781
Query: 279 DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAA 338
E PGD+L+FLTGQEEI++ ++ ER+ L + +LV +P++S+LPSE Q R+F PA
Sbjct: 782 TEPPGDMLLFLTGQEEIDTACEILYERMKALGPSVPELVILPVYSALPSEMQSRIFDPAP 841
Query: 339 AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSG 398
G RKV++ATNIAETS+TI I YVIDPGFVK + YDP GM+SL+V PIS+AQA QR+G
Sbjct: 842 PGGRKVVIATNIAETSITIDNIYYVIDPGFVKQKAYDPKLGMDSLVVTPISQAQAKQRAG 901
Query: 399 RAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 457
RAGR GPGKCFRLY E + ++ +T P+I+R NLS+ IL LKA+G++D++ FDFM+ P
Sbjct: 902 RAGRTGPGKCFRLYTEAAYQSEMLPTTIPDIQRQNLSHTILMLKAMGINDLLHFDFMDPP 961
Query: 458 SRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLIT 517
+++ +LE+L+ L AL D+ L+ +G +MA P++P +K LI + C EEML
Sbjct: 962 PTNTMLTALEELYALSALDDEGLLTR-LGRKMADFPMEPALAKVLIASVDMGCSEEMLSI 1020
Query: 518 VAMLSVESIFFRSPGEVRRGKKCNEIFCKSRWRSPHFD 555
VAMLS++S+F+R P E + ++ ++ K+++ PH D
Sbjct: 1021 VAMLSIQSVFYR-PKE--KQQQADQK--KAKFHDPHGD 1053
Score = 341 (125.1 bits), Expect = 6.1e-118, Sum P(2) = 6.1e-118
Identities = 75/152 (49%), Positives = 96/152 (63%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
I QQR+SLP+ ++L+E V +N +LI+VG+TGSGKTTQ+ Q+L AG+ G +IG T
Sbjct: 570 IKQQRESLPVYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQYLAEAGWANKG-IIGCT 628
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 144
QP EE G +LG VGY+IRF+D TS T+IK E LLDP L
Sbjct: 629 QPRRVAAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPETKIKYMTDGMLQREVLLDPDL 688
Query: 145 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
+YS I++DEAHERT+ TDVL GLLK R
Sbjct: 689 KKYSVIMLDEAHERTIATDVLFGLLKTTLKRR 720
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 838 (300.0 bits), Expect = 1.6e-117, Sum P(2) = 1.6e-117
Identities = 168/326 (51%), Positives = 236/326 (72%)
Query: 209 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDA 268
LKQ R+ LK++I SA+L+A FS+YF A+ + GR FPV+I YT PE DYLDA
Sbjct: 644 LKQALQRR-PELKVLITSATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEADYLDA 702
Query: 269 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 328
+LIT+ Q+HL E PGDIL+FLTGQEEI++ +++ ER+ L L+ +P++S+LPSE
Sbjct: 703 SLITVMQIHLSEPPGDILLFLTGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSE 762
Query: 329 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 388
Q ++F PA G RKV++ATNIAETS+TI GI YVIDPGF K + ++P GM+SL+V PI
Sbjct: 763 MQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPI 822
Query: 389 SKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDD 447
S+A A QRSGRAGR GPGKC+RLY E+ F +++ S+ PEI+R NL N +L +KA+G++D
Sbjct: 823 SQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGIND 882
Query: 448 IIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQ 507
++ FDFM+ P +++ ++EQL+ LGAL ++ L+ +G +MA PLDP SK LI +
Sbjct: 883 LLNFDFMDPPPVQTLVSAMEQLYSLGALDEEGLLTR-LGRKMAEFPLDPQLSKMLIASVD 941
Query: 508 FNCLEEMLITVAMLSVESIFFRSPGE 533
C +E+L VAMLSV+++F+R P E
Sbjct: 942 LGCSDEILTVVAMLSVQNVFYR-PKE 966
Score = 340 (124.7 bits), Expect = 1.6e-117, Sum P(2) = 1.6e-117
Identities = 77/162 (47%), Positives = 101/162 (62%)
Query: 24 FNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGF 83
+ ++SR I +QR+SLPI + + ++ V ++ +L+++GETGSGKTTQ+ Q+L AG+
Sbjct: 493 YGKATSR--SIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGY 550
Query: 84 CRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK------- 136
GK IG TQP EE G +LGQ VGY+IRF+D TS T IK
Sbjct: 551 GTRGK-IGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGIL 609
Query: 137 --EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
E LLDP LS YS II+DEAHERT+ TDVL GLLK+ R
Sbjct: 610 LRECLLDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRR 651
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 835 (299.0 bits), Expect = 4.0e-117, Sum P(2) = 4.0e-117
Identities = 175/337 (51%), Positives = 236/337 (70%)
Query: 198 DRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+R T+ + L + RK LKLII SA+LD+ FSEYF A + GR FPVEILY
Sbjct: 664 ERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILY 723
Query: 258 TLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLV 317
T PE DYL+A IT+ Q+HL E PGD+LVFLTGQEEI++ ++ ER+ + +L+
Sbjct: 724 TREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELI 783
Query: 318 TVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPV 377
+P++ +LPSE Q R+F PA AG RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+P
Sbjct: 784 ILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPK 843
Query: 378 KGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNV 436
GM+SL+V PIS+A A QRSGRAGR GPGKC+RLY E F D++ + PEI+R NL++
Sbjct: 844 SGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLAST 903
Query: 437 ILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDP 496
+LQLKA+G++++I FDFM+ P S+I +L L L AL D L+ +G +MA PL+P
Sbjct: 904 LLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTK-LGRRMAEFPLEP 962
Query: 497 IYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGE 533
SK LI++ C EE+L VAML+V++IF+R P E
Sbjct: 963 SLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYR-PKE 998
Score = 345 (126.5 bits), Expect = 4.0e-117, Sum P(2) = 4.0e-117
Identities = 77/152 (50%), Positives = 97/152 (63%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
+++QR+SLPI +++K L+E + N IL++VGETGSGKTTQ+ Q+ AG R GK IG T
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGK-IGCT 591
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 144
QP EE G +LG VGY+IRF+D TS T IK E L+DP L
Sbjct: 592 QPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDL 651
Query: 145 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
S YS I++DEAHERT+HTDVL GLLK R
Sbjct: 652 SGYSLIMLDEAHERTIHTDVLFGLLKAAARKR 683
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 835 (299.0 bits), Expect = 4.0e-117, Sum P(2) = 4.0e-117
Identities = 175/337 (51%), Positives = 236/337 (70%)
Query: 198 DRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+R T+ + L + RK LKLII SA+LD+ FSEYF A + GR FPVEILY
Sbjct: 664 ERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILY 723
Query: 258 TLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLV 317
T PE DYL+A IT+ Q+HL E PGD+LVFLTGQEEI++ ++ ER+ + +L+
Sbjct: 724 TREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELI 783
Query: 318 TVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPV 377
+P++ +LPSE Q R+F PA AG RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+P
Sbjct: 784 ILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPK 843
Query: 378 KGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNV 436
GM+SL+V PIS+A A QRSGRAGR GPGKC+RLY E F D++ + PEI+R NL++
Sbjct: 844 SGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLAST 903
Query: 437 ILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDP 496
+LQLKA+G++++I FDFM+ P S+I +L L L AL D L+ +G +MA PL+P
Sbjct: 904 LLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTK-LGRRMAEFPLEP 962
Query: 497 IYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGE 533
SK LI++ C EE+L VAML+V++IF+R P E
Sbjct: 963 SLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYR-PKE 998
Score = 345 (126.5 bits), Expect = 4.0e-117, Sum P(2) = 4.0e-117
Identities = 77/152 (50%), Positives = 97/152 (63%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
+++QR+SLPI +++K L+E + N IL++VGETGSGKTTQ+ Q+ AG R GK IG T
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGK-IGCT 591
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 144
QP EE G +LG VGY+IRF+D TS T IK E L+DP L
Sbjct: 592 QPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDL 651
Query: 145 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
S YS I++DEAHERT+HTDVL GLLK R
Sbjct: 652 SGYSLIMLDEAHERTIHTDVLFGLLKAAARKR 683
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 822 (294.4 bits), Expect = 6.8e-117, Sum P(2) = 6.8e-117
Identities = 164/321 (51%), Positives = 231/321 (71%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+K L++IIMSA+L+A FSE+F A+ ++ GRQ+PV+I YT PEPDYLDA L TIF
Sbjct: 237 KKRPALRVIIMSATLNAERFSEFFDGAEICYISGRQYPVQIHYTYTPEPDYLDACLRTIF 296
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+H PGDILVFLTGQ+EIE++E L++ QLP ++ P+F+SLP EQQ++VF
Sbjct: 297 QLHTKLPPGDILVFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVF 356
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
PA A RKV+L+TNIAETSVTI GI+YVID G K + ++ G+ESL V PIS++ A+
Sbjct: 357 LPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAM 416
Query: 395 QRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFM 454
QRSGRAGRE G+C+R+Y E +FDKL T PEIKR +LS +L LKA G +D+I F +M
Sbjct: 417 QRSGRAGREAAGQCYRIYTEADFDKLPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYM 476
Query: 455 EKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEM 514
+ PS+ ++++LE L+ +GAL D+ ++D +G+QM+ +PL P ++A++ A + NCL E+
Sbjct: 477 DPPSKEGLLRALEHLYSIGALDDNGHIND-LGYQMSLIPLLPSLARAVLAAREHNCLSEV 535
Query: 515 LITVAMLSVESIFFRSPGEVR 535
+ V+ LS +S+F P E R
Sbjct: 536 IDVVSCLSTDSMFL-FPQEKR 555
Score = 350 (128.3 bits), Expect = 6.8e-117, Sum P(2) = 6.8e-117
Identities = 75/177 (42%), Positives = 109/177 (61%)
Query: 9 VSNSTHNPKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGS 68
V + +P+ S+ +S S+R+ IL+QRK+LPI L ++++ N ++++VGETGS
Sbjct: 68 VGSDNSSPEKRSE----NSPSKRKDILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGS 123
Query: 69 GKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDR 128
GK+TQ+PQFL + ++G + +TQP E G LG++VGYSIRFDD
Sbjct: 124 GKSTQIPQFLNECPYAQEG-CVAITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDT 182
Query: 129 TSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
TS TRIK E + DP LS+Y +I+DEAHERT+ TD+LLG +KK+ R
Sbjct: 183 TSKKTRIKYLTDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKR 239
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 818 (293.0 bits), Expect = 6.8e-117, Sum P(2) = 6.8e-117
Identities = 163/312 (52%), Positives = 226/312 (72%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LKL+I SA++DA+ F YF A ++ GR + V+I YT PE +YL A + T+FQ+H+
Sbjct: 628 LKLLISSATMDAQKFQSYFDNAPIFNIPGRMYNVDIHYTQQPEANYLAAAITTVFQIHVS 687
Query: 280 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 339
+ PGDILVFLTGQEEIE+ E+ +QE +L +++ PI+++LPS+ Q ++F P
Sbjct: 688 QGPGDILVFLTGQEEIEAAEQSLQETARKLGNKIPEMIICPIYANLPSDLQAKIFEPTPP 747
Query: 340 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGR 399
RKV+LATNIAETS+TI GI YVIDPGFVK +++P GMESL+V P S+A A QR+GR
Sbjct: 748 KARKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRASANQRAGR 807
Query: 400 AGREGPGKCFRLYPE-NEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPS 458
AGR GPGKCFRLY + +++LE+ST PEI+R NLS+VIL LK+LG+D ++ FDFM+ P
Sbjct: 808 AGRVGPGKCFRLYTKWAYYNELEESTTPEIQRTNLSSVILMLKSLGIDQLLEFDFMDPPP 867
Query: 459 RASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITV 518
+II++LEQL+ LGAL D +L+ +G QMA P DP+ +KA++ A + C+EE+L V
Sbjct: 868 AETIIRALEQLYALGALNDRGELTK-IGRQMAEFPTDPMLAKAILAADKHGCVEEVLSIV 926
Query: 519 AMLSVES-IFFR 529
+ML S +FFR
Sbjct: 927 SMLGEASALFFR 938
Score = 354 (129.7 bits), Expect = 6.8e-117, Sum P(2) = 6.8e-117
Identities = 74/161 (45%), Positives = 98/161 (60%)
Query: 25 NDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFC 84
+ + + Q I RK LPI ++++ V + +LIIVGETGSGKTTQLPQ+L AG+
Sbjct: 465 DQAEQKAQTIEDTRKKLPIYQFRDQIIQAVHDHQVLIIVGETGSGKTTQLPQYLHEAGYT 524
Query: 85 RDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK-------- 136
++G +G TQP EE GV+LG VGYSIRF+D TS T +K
Sbjct: 525 KNGMKVGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDNTSDKTVLKYMTDGMLL 584
Query: 137 -EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
E L +P L +YSA+++DEAHERTV TD+ GLLK + AR
Sbjct: 585 RELLTEPDLGQYSALMIDEAHERTVPTDIACGLLKDIAKAR 625
Score = 39 (18.8 bits), Expect = 1.2e-83, Sum P(2) = 1.2e-83
Identities = 7/26 (26%), Positives = 19/26 (73%)
Query: 31 RQKILQQRKSLPIASVEKRLVEEVRK 56
RQ+ L++R++ +A + +++ EE ++
Sbjct: 298 RQEYLKKRETERLALLRRQVAEETQE 323
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 843 (301.8 bits), Expect = 1.8e-116, Sum P(2) = 1.8e-116
Identities = 168/311 (54%), Positives = 225/311 (72%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LK+I+ SA+LD+ FS YF + + GR FPVE+LYT PE DYL A L ++ Q+H+
Sbjct: 486 LKVIVTSATLDSNKFSRYFNNCPIITIPGRTFPVEVLYTKAPEMDYLAAALESVIQIHVS 545
Query: 280 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 339
E GDILVFLTGQEEIE+ + ER+ L E +L+ +P++S+LPSE Q R+F P
Sbjct: 546 EPAGDILVFLTGQEEIETSCEALHERMKLLGENIPELIILPVYSALPSEMQTRIFEPTPP 605
Query: 340 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGR 399
G RKVILATNIAETS+TI GI YV+DPGFVK +YD GM+SL V PISKAQA QRSGR
Sbjct: 606 GSRKVILATNIAETSITIDGIYYVVDPGFVKINMYDSKLGMDSLRVTPISKAQANQRSGR 665
Query: 400 AGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPS 458
AGR GPGKC+RLY E ++K + +T PEI+R NLS+ IL LKA+G+ D++ F+FM+ PS
Sbjct: 666 AGRTGPGKCYRLYTEQAYEKEMIPNTIPEIQRQNLSHTILMLKAMGIHDLVNFEFMDPPS 725
Query: 459 RASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITV 518
+++ +LE L++L AL DD L+ +G +MA LP++P +K LI + ++ C EE+L V
Sbjct: 726 TTTMLTALEDLYILDALDDDGNLTT-LGRKMADLPMEPALAKTLIQSVEYECTEEILSIV 784
Query: 519 AMLSVESIFFR 529
AMLSV++IF+R
Sbjct: 785 AMLSVQTIFYR 795
Score = 325 (119.5 bits), Expect = 1.8e-116, Sum P(2) = 1.8e-116
Identities = 74/159 (46%), Positives = 98/159 (61%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDG---KLI 90
I +QR+ LP+ ++ +L+E +R N ++IVGETGSGKTTQ+ Q+++ G + G KLI
Sbjct: 329 IQEQRRMLPVYAMRSQLLEAIRDNQFVVIVGETGSGKTTQIVQYIYEEGMNKVGGQTKLI 388
Query: 91 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 141
G TQP EE G +LG VGY+IRF+D TS +T IK EAL D
Sbjct: 389 GCTQPRRVAAESVAKRVSEEVGCKLGDTVGYTIRFEDVTSENTVIKYMTDGMLEREALND 448
Query: 142 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKV--QNARSK 178
P ++RYS I++DEAHERT+ TDVL LLK QN K
Sbjct: 449 PNMNRYSVIMLDEAHERTIATDVLFALLKNAAKQNPNLK 487
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 833 (298.3 bits), Expect = 3.7e-116, Sum P(2) = 3.7e-116
Identities = 165/317 (52%), Positives = 227/317 (71%)
Query: 216 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+F P LKL+I SA++DA FS+YF A GR++PVEI YT PE DY+DA ++TI
Sbjct: 545 RFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTIL 604
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
+H+ E GDILVF TGQEEIE+ E +++ R+ L R+L+ PI+++LPSE Q ++F
Sbjct: 605 TIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIF 664
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
P G RKV+LATNIAETS+TI GIKYV+DPGF K + Y+P GMESLL+ PISKA A
Sbjct: 665 EPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASAT 724
Query: 395 QRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR PGKC+RLY ++ LE++T PE++R NL++V+L LK+LG+ D+I FDF
Sbjct: 725 QRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDF 784
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
M+ P +++KSLE LF LGAL +L+ G +MA PLDP+ SK ++V+ ++ C +E
Sbjct: 785 MDPPPAEALVKSLELLFALGALNKLGELTK-AGRRMAEFPLDPMLSKMIVVSDKYKCSDE 843
Query: 514 MLITVAMLSVE-SIFFR 529
++ AMLS+ SIF+R
Sbjct: 844 IISIAAMLSIGGSIFYR 860
Score = 332 (121.9 bits), Expect = 3.7e-116, Sum P(2) = 3.7e-116
Identities = 72/184 (39%), Positives = 110/184 (59%)
Query: 4 VAEGEVSNSTHNPKLHSKPFFNDSSSRR--QKILQQRKSLPIASVEKRLVEEVRKNDILI 61
+ E ++ + + +K D + + +++ + R+SLPI + +L++ V ++ +L+
Sbjct: 365 IKESVMAGENYEDAMDAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLV 424
Query: 62 IVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGY 121
IVG+TGSGKTTQ+PQ+L AG+ + GK +G TQP +E GV+LG VGY
Sbjct: 425 IVGDTGSGKTTQIPQYLHEAGYTKRGK-VGCTQPRRVAAMSVAARVAQEMGVKLGHEVGY 483
Query: 122 SIRFDDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
SIRF+D TS T +K E L +P L+ YS +IVDEAHERT+ TD+L GL+K +
Sbjct: 484 SIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDI 543
Query: 173 QNAR 176
R
Sbjct: 544 ARFR 547
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 817 (292.7 bits), Expect = 3.7e-116, Sum P(2) = 3.7e-116
Identities = 161/312 (51%), Positives = 224/312 (71%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LKL+I SA++DA FS++F A GR++PV+I +T PE DY+DA + T+ +H+
Sbjct: 550 LKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDICFTTAPEADYMDAAITTVLTIHVK 609
Query: 280 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 339
E GD+LVFL GQEEIE+VE ++ ++ L R+L+ PI+++LPSE Q ++F P
Sbjct: 610 EPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPE 669
Query: 340 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGR 399
G RKV+LATNIAETS+TI GIKYV+DPGF K + Y+P GMESLLV PISKA A QR+GR
Sbjct: 670 GARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGR 729
Query: 400 AGREGPGKCFRLYPE-NEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPS 458
AGR PGKC+RLY N ++ LED+T PEI+R NL++V+L LK+LG+ +++ FDFM+ P
Sbjct: 730 AGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPP 789
Query: 459 RASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITV 518
++IKSLE LF LGAL +L+ G +MA PLDP+ SK ++V+ ++ C +E++
Sbjct: 790 SEALIKSLELLFALGALNQLGELTK-AGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIA 848
Query: 519 AMLSV-ESIFFR 529
AMLS+ SIF+R
Sbjct: 849 AMLSIGPSIFYR 860
Score = 348 (127.6 bits), Expect = 3.7e-116, Sum P(2) = 3.7e-116
Identities = 77/178 (43%), Positives = 108/178 (60%)
Query: 9 VSNSTHNPKLHSKPFFNDSSSRRQKILQQ-RKSLPIASVEKRLVEEVRKNDILIIVGETG 67
++ + ++H+KP + + +LQ+ RK+LPI + +L+ V+ + +LIIVGETG
Sbjct: 371 LAGDNYEDEMHAKPSQDSAGKSAFHMLQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETG 430
Query: 68 SGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD 127
SGKTTQ+PQ+L AG+ + GK +G TQP +E G +LG VGYSIRF+D
Sbjct: 431 SGKTTQIPQYLHEAGYTKLGK-VGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFED 489
Query: 128 RTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
TS T +K E L +P L YS IIVDEAHERT+ TD+L GL+K + AR
Sbjct: 490 CTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARAR 547
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 819 (293.4 bits), Expect = 1.3e-115, Sum P(2) = 1.3e-115
Identities = 160/317 (50%), Positives = 228/317 (71%)
Query: 219 PLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHL 278
PLK+I+MSA++D FS+YF A ++++GRQ P++I YT P+ DYL A L+++FQ+H
Sbjct: 215 PLKVIVMSATMDVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIH- 273
Query: 279 DEAPG--DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAP 336
EAP DILVFLTGQEEIE++ + ++ LP+ ++ +P+++SLP QQ+RVF
Sbjct: 274 QEAPASQDILVFLTGQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQG 333
Query: 337 AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQR 396
A G+RKVI++TNIAETS+TI GIKYV+D G VKA+ Y+P G+E L V +SK QA QR
Sbjct: 334 APKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 393
Query: 397 SGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEK 456
+GRAGRE G C+RLY E+EF+K E T PEI+RCNL++VILQL A+ V +++ FDFM K
Sbjct: 394 TGRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSK 453
Query: 457 PSRASIIKSLEQLFLLGALT--DDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEM 514
PS I ++ QL LLGAL DD P+G +MA PL+P ++K ++++ +F+C EE+
Sbjct: 454 PSPDHIEAAIAQLDLLGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEI 513
Query: 515 LITVAMLSVESIFFRSP 531
L V++LSV+S+ + P
Sbjct: 514 LTIVSLLSVDSVLYNPP 530
Score = 341 (125.1 bits), Expect = 1.3e-115, Sum P(2) = 1.3e-115
Identities = 73/167 (43%), Positives = 102/167 (61%)
Query: 22 PFFNDSSSRRQKILQ-QRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH 80
P S+S ++ L+ QR+SLPI +L+ ++R D +++GETGSGKTTQ+PQ+L+
Sbjct: 45 PLAQPSASPYREALELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYE 104
Query: 81 AGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---- 136
G R G +I VTQP +E ELG+ VGY++RF+D TS TRIK
Sbjct: 105 GGISRQG-IIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTD 163
Query: 137 -----EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 178
EA+ D L +YS +I+DEAHERT+HTDVL G++K Q R +
Sbjct: 164 GMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKE 210
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 802 (287.4 bits), Expect = 2.6e-115, Sum P(2) = 2.6e-115
Identities = 159/322 (49%), Positives = 225/322 (69%)
Query: 216 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+F P LKL+I SA+LDA FS +F A + GR++PV+I YT PE DY+DA +++
Sbjct: 394 RFRPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFYTKAPEADYIDACCVSVL 453
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+H + GDILVFLTGQ+EIE+ + ++ +R+ +L R+L+ +P++++LPS+ Q ++F
Sbjct: 454 QIHATQPLGDILVFLTGQDEIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIF 513
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
P RKVILATNIAETS+TI I YVIDPGF K ++ GMESL+VVPISKA A
Sbjct: 514 EPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASAN 573
Query: 395 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR PGKCFRLY + +LED+T PEI+R NL N +L LKALG++D+I FDF
Sbjct: 574 QRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDF 633
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
++ P +++ +LEQL+ LGAL +L+ +G +MA P+DP+ K L+ + ++ C EE
Sbjct: 634 LDPPPHETLVLALEQLYALGALNHHGELTK-LGRRMAEFPVDPMMGKMLLASEKYKCSEE 692
Query: 514 MLITVAMLSVES-IFFRSPGEV 534
M+ AMLSV S IF+R ++
Sbjct: 693 MVTIAAMLSVNSAIFYRPKDKI 714
Score = 355 (130.0 bits), Expect = 2.6e-115, Sum P(2) = 2.6e-115
Identities = 74/165 (44%), Positives = 103/165 (62%)
Query: 21 KPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH 80
+P + +R + + R+SLP+ ++ L+ V+++ +LII GETGSGKTTQ+PQ+L
Sbjct: 232 QPELTEKERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVE 291
Query: 81 AGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---- 136
AGF +D K+IG TQP EE GV+LG VGYSIRF+D TS T +K
Sbjct: 292 AGFTKDKKMIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTD 351
Query: 137 -----EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
E L +P L+ YS +I+DEAHERT+HTD+L GL+K + R
Sbjct: 352 GTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFR 396
Score = 38 (18.4 bits), Expect = 7.4e-82, Sum P(2) = 7.4e-82
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 29 SRRQKILQQRKSLPIASVEKRLVEE 53
SRRQ L++RK +A +E ++++
Sbjct: 86 SRRQ-YLEKRKDDKVAELEADILDD 109
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 790 (283.2 bits), Expect = 2.0e-114, Sum P(2) = 2.0e-114
Identities = 158/332 (47%), Positives = 227/332 (68%)
Query: 216 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+F P LKL+I SA++DA FS+YF A ++ GR++ V YT PE DYLDA ++T+
Sbjct: 608 RFRPDLKLLISSATMDAERFSDYFDGAPTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVL 667
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+H+ E GDILVFLTGQEE++ ++Q R L ++L+ I+S+LP++ Q ++F
Sbjct: 668 QIHITEPLGDILVFLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIF 727
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
P RKV+LATNIAETS+TI GI YVIDPGF K ++++P GMESL++ P+S+A A
Sbjct: 728 EPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASAN 787
Query: 395 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR GRAGR PGKCFRL+ FD +LE++T PEI+R NL NV+L LK++G++D++ FDF
Sbjct: 788 QRKGRAGRVAPGKCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDF 847
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
M+ P ++I +LEQL+ LGAL D +L+ +G +MA P+DP SK +I + ++ C EE
Sbjct: 848 MDPPPAQTLIAALEQLYALGALNDRGQLTK-LGRKMAEFPVDPQLSKMIIASEKYKCSEE 906
Query: 514 MLITVAMLSV-ESIFFRSPGEVRRGKKCNEIF 544
+L AMLSV +IF+R + ++F
Sbjct: 907 ILTICAMLSVGNTIFYRPKDKAFAADAARKLF 938
Score = 359 (131.4 bits), Expect = 2.0e-114, Sum P(2) = 2.0e-114
Identities = 78/165 (47%), Positives = 102/165 (61%)
Query: 21 KPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH 80
KP + S+ + I + RKSLP+ ++L++ VR+ +LIIVGETGSGKTTQ+PQ+L
Sbjct: 447 KPGDDGSAQAKMTIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHE 506
Query: 81 AGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTST------- 133
AGF + GK IG TQP EE G +LG VGYSIRF+D TS T
Sbjct: 507 AGFSKTGK-IGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTD 565
Query: 134 --RIKEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
++E L P L+ YS +I+DEAHERT+HTD+L GLLK + R
Sbjct: 566 GMLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFR 610
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 799 (286.3 bits), Expect = 2.7e-114, Sum P(2) = 2.7e-114
Identities = 160/326 (49%), Positives = 227/326 (69%)
Query: 209 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDA 268
LK+ R+ L+LI+ SA+LDA FS YF + GR FPVEILYT PE DYLDA
Sbjct: 651 LKKLMKRRL-DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDA 709
Query: 269 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 328
LIT+ Q+HL E GDILVFLTGQEEI+S + + ER+ L + +L+ +P++S+LPSE
Sbjct: 710 ALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSE 769
Query: 329 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 388
Q R+F P G RKV++ATNIAE S+TI GI YV+DPGF K +Y+P +G+ESL++ PI
Sbjct: 770 MQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPI 829
Query: 389 SKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDD 447
S+A A QR+GRAGR GPGKC+RLY E+ + +++ ++ PEI+R NL L +KA+G++D
Sbjct: 830 SQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGIND 889
Query: 448 IIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQ 507
++ FDFM+ P ++I ++EQL+ LGAL ++ L+ +G +MA PL+P SK L+ +
Sbjct: 890 LLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTK-LGRKMAEFPLEPPLSKMLLASVD 948
Query: 508 FNCLEEMLITVAMLSVESIFFRSPGE 533
C +E+L +AM+ +IF+R P E
Sbjct: 949 LGCSDEILTMIAMIQTGNIFYR-PRE 973
Score = 356 (130.4 bits), Expect = 2.7e-114, Sum P(2) = 2.7e-114
Identities = 78/164 (47%), Positives = 101/164 (61%)
Query: 22 PFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHA 81
P F S + I +QR+SLPI ++K L++ V N +L+++GETGSGKTTQ+ Q+L A
Sbjct: 498 PTFGQRS--KLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA 555
Query: 82 GFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK----- 136
G+ GK IG TQP EE G LG+ VGY+IRF+D T T IK
Sbjct: 556 GYTTKGK-IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDG 614
Query: 137 ----EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
E L+D LS+YS I++DEAHERT+HTDVL GLLKK+ R
Sbjct: 615 MLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRR 658
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 807 (289.1 bits), Expect = 3.8e-114, Sum P(2) = 3.8e-114
Identities = 161/322 (50%), Positives = 229/322 (71%)
Query: 216 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+F P LK+++ SA+LD FS +F A + GR+FPV+I YT PE DYL+A ++++
Sbjct: 554 RFRPDLKVLVASATLDTERFSSFFDDAPVFRIPGRRFPVDIYYTKAPEADYLEACVVSVL 613
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+H+ ++PGD+LVFLTGQEEIE+ L+QER +L +L+ +PI+++LPS+ Q ++F
Sbjct: 614 QIHVTQSPGDVLVFLTGQEEIEACCELLQERCRRLGSKISELLVLPIYANLPSDMQAKIF 673
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
P G RKV++ATNIAETS+TI GI YVIDPGF K + Y+ GMESL+V P S+A A
Sbjct: 674 NPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSRASAN 733
Query: 395 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR GKCFRLY F ++E++T PEI+R NL NV+L LK+LG++D+I FDF
Sbjct: 734 QRAGRAGRVAAGKCFRLYTAWAFKHEMEETTVPEIQRTNLGNVVLLLKSLGINDLIHFDF 793
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
M+ P +++ +LEQL+ LGAL +L+ +G +MA LP+DP+ SK ++ + Q+ C EE
Sbjct: 794 MDPPPHETLVLALEQLYALGALNHLGELTK-LGRRMAELPVDPMLSKMILASEQYKCSEE 852
Query: 514 MLITVAMLSVE-SIFFRSPGEV 534
+L AMLSV SIF+R +V
Sbjct: 853 VLTIAAMLSVNNSIFYRPKDKV 874
Score = 339 (124.4 bits), Expect = 3.8e-114, Sum P(2) = 3.8e-114
Identities = 72/166 (43%), Positives = 99/166 (59%)
Query: 20 SKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLF 79
S+P + + ++Q I + R+SLPI + L+ + + IL+I GETGSGKTTQ+PQ+L
Sbjct: 391 SEPELSQAEKQKQSIQEVRRSLPIFPYREDLLAAIGDHQILVIEGETGSGKTTQIPQYLL 450
Query: 80 HAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK--- 136
G+ + G IG TQP +E V+LG VGYSIRF+D TS T +K
Sbjct: 451 EEGYTKGGMKIGCTQPRRVAAMSVAARVAQEMSVKLGNEVGYSIRFEDCTSERTILKYMT 510
Query: 137 ------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
E L +P L+ YS II+DEAHERT+HTD+L GL+K + R
Sbjct: 511 DGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLIKDIARFR 556
Score = 39 (18.8 bits), Expect = 1.7e-82, Sum P(2) = 1.7e-82
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 3 SVAEGEVSNSTHNPKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKR 49
S ++GE + K SK D +R+ + Q+R P +S E +
Sbjct: 100 SESDGEAAREGGKEK-KSKE--RDKGKKRKHLRQKRDESPSSSEEDK 143
Score = 37 (18.1 bits), Expect = 2.8e-82, Sum P(2) = 2.8e-82
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 42 PIASVEKRLVEEVRKNDILIIVGETGS 68
P ++E++++E RKN ++ ++ S
Sbjct: 76 PARAIERQVMEMERKNRTYTLLEDSES 102
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 824 (295.1 bits), Expect = 4.6e-114, Sum P(2) = 4.6e-114
Identities = 165/316 (52%), Positives = 229/316 (72%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+K LKLI+ SA+LDA FS+YF A + GR FPVE+LYT PE DYLDA+LIT+
Sbjct: 727 QKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVM 786
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+HL E PGDIL+FLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 787 QIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 846
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
PA AG RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ GM+SL+V PIS+A A
Sbjct: 847 DPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAK 906
Query: 395 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR GPGK +RLY E + D++ + PEI+R NL+ +LQLK +G++D++ FDF
Sbjct: 907 QRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDF 966
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
M+ P S++ +LEQL L AL D+ L+ +G +MA PL+P SK LI++ C +E
Sbjct: 967 MDAPPVESLVMALEQLHSLSALDDEGLLTR-LGRRMAEFPLEPNLSKMLIMSVALQCSDE 1025
Query: 514 MLITVAMLSVESIFFR 529
+L V+MLSV+++F+R
Sbjct: 1026 ILTIVSMLSVQNVFYR 1041
Score = 332 (121.9 bits), Expect = 4.6e-114, Sum P(2) = 4.6e-114
Identities = 74/152 (48%), Positives = 92/152 (60%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
+++QR+SLPI + L++ V N ILI++GETGSGKTTQ+ Q+L GF GK IG T
Sbjct: 579 LVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGK-IGCT 637
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 144
QP EE G LGQ VGY+IRF+D TS T IK E L++ L
Sbjct: 638 QPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAEL 697
Query: 145 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
YS I++DEAHERT+HTDVL GLLK R
Sbjct: 698 KSYSVIMLDEAHERTIHTDVLFGLLKTAVQKR 729
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 806 (288.8 bits), Expect = 6.1e-114, Sum P(2) = 6.1e-114
Identities = 160/320 (50%), Positives = 231/320 (72%)
Query: 219 PLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHL 278
PLK+I+MSA++D FS+YF A ++++GRQ P+++ YT P+ DYL A L+++FQ+H
Sbjct: 174 PLKVIVMSATMDVDQFSQYFNGAPVLYLEGRQHPIQVFYTKQPQSDYLQAALVSVFQIH- 232
Query: 279 DEAPG--DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAP 336
EAP DILVFLTGQEEIE++ + ++ LP+ ++ +P+++SLP QQ+RVF
Sbjct: 233 QEAPSSQDILVFLTGQEEIEAMTKTCRDIAKHLPDGCPQMTVMPLYASLPYSQQLRVFQA 292
Query: 337 AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQR 396
A G RKVIL+TNIAETS+TI GIKYV+D G VKA+ Y+P G+E L V +SKAQA QR
Sbjct: 293 APKGCRKVILSTNIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQR 352
Query: 397 SGRAGREGPGKCFRLYPENEFDKLEDSTKPEIK---RCNLSNVILQLKALGVDDIIGFDF 453
+GRAGRE G C+RLY E+EF+K + T PEI+ RCNL++V+LQL AL + +I+ FDF
Sbjct: 353 TGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQSLCRCNLASVLLQLLALRIPNILTFDF 412
Query: 454 MEKPSRASIIKSLEQLFLLGALT--DDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCL 511
M KPS +I ++EQL LLGA+ +D + P+G +MA PL+P +SK ++++ +F+C
Sbjct: 413 MSKPSPDAIQAAIEQLDLLGAVEQKEDQLVLTPLGRKMAAFPLEPKFSKTILLSPKFHCT 472
Query: 512 EEMLITVAMLSVESIFFRSP 531
EE+L V++LSV+S+ + P
Sbjct: 473 EEILTIVSLLSVDSVLYNPP 492
Score = 338 (124.0 bits), Expect = 6.1e-114, Sum P(2) = 6.1e-114
Identities = 70/151 (46%), Positives = 94/151 (62%)
Query: 37 QRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPX 96
QR+ LPI L+ ++R + +++GETGSGKTTQ+PQ+L+ AG R G +I VTQP
Sbjct: 20 QRRELPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYEAGIGRQG-IIAVTQPR 78
Query: 97 XXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRY 147
+E ELG+ VGY++RFDD TS TRIK EA+ DP L +Y
Sbjct: 79 RVAAISLATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFLTDGMLLREAIGDPILRKY 138
Query: 148 SAIIVDEAHERTVHTDVLLGLLKKVQNARSK 178
S +I+DEAHERT+HTDVL G++K Q R +
Sbjct: 139 SVVILDEAHERTIHTDVLFGVVKAAQKKRKE 169
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 788 (282.4 bits), Expect = 7.8e-114, Sum P(2) = 7.8e-114
Identities = 157/317 (49%), Positives = 224/317 (70%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
R+ LKL+I SA+++A F+ YF A ++ GR++PV+I YT PE +YL A + T+F
Sbjct: 515 RERKDLKLLISSATMNAEKFASYFDDAPIFNIPGRRYPVDIYYTPAPEANYLSAAITTVF 574
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+H + GDIL+FLTGQ+EIE+ E + E +L ++LV PI+++LPSE Q ++F
Sbjct: 575 QIHTTQPKGDILIFLTGQDEIEAAEMQITETARKLGSRVKELVICPIYANLPSELQSKIF 634
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
P RKV+LATNIAETS+TI GI YVIDPG+VK +Y+P GM +L+VVP S+A A
Sbjct: 635 EPTPENARKVVLATNIAETSLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPCSRASAN 694
Query: 395 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QRSGRAGR GPGKCFRLY + + +++E+ST PEI+R NL+ V+LQLK+LG+++++ F+F
Sbjct: 695 QRSGRAGRVGPGKCFRLYTKYAYMNEMEESTTPEIQRTNLNGVVLQLKSLGINELLDFEF 754
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
M+ P ++I +L QLF L L +L+ +G QMA P DP+ +KA++ A + C+EE
Sbjct: 755 MDPPPTEALIGALNQLFALQGLNHKGELTK-LGRQMAEFPTDPMLAKAVLAADKEGCVEE 813
Query: 514 MLITVAMLSVES-IFFR 529
+L VAMLS S +FFR
Sbjct: 814 VLSIVAMLSEASALFFR 830
Score = 355 (130.0 bits), Expect = 7.8e-114, Sum P(2) = 7.8e-114
Identities = 75/161 (46%), Positives = 101/161 (62%)
Query: 26 DSSSRRQKILQQ-RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFC 84
D++ +RQ +Q+ RKSLPI + + + IL+IVGETGSGKTTQLPQ+L AG+
Sbjct: 357 DAAEKRQLSMQETRKSLPIYVYRDEFLAALEQYQILVIVGETGSGKTTQLPQYLHEAGYT 416
Query: 85 RDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK-------- 136
+DG +G TQP +E GV++G VGYSIRF+D TS T +K
Sbjct: 417 KDGMRVGCTQPRRVAAMSVAARVADEMGVKVGNEVGYSIRFEDNTSDKTILKYMTDGMLL 476
Query: 137 -EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
E + +P LS YSA+++DEAHERTVHTD+LL L+K + R
Sbjct: 477 REFMTEPDLSSYSALMIDEAHERTVHTDILLALVKDLARER 517
Score = 37 (18.1 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 31 RQKILQQRKSLPIASVEKRLVEE 53
RQ+ ++R++ IA K++ EE
Sbjct: 191 RQEYFKKRETEKIALFRKQVAEE 213
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 783 (280.7 bits), Expect = 7.8e-114, Sum P(2) = 7.8e-114
Identities = 159/318 (50%), Positives = 219/318 (68%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LKL+I SA+LDA FS +F A + GR+FPV+I YT PE DY+DA ++TI Q+HL
Sbjct: 511 LKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLT 570
Query: 280 EA-PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAA 338
+ PGDILVFLTGQEEIE+V+ + ER L ++L+ +P++++LPS+ Q ++F P
Sbjct: 571 QPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTP 630
Query: 339 AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSG 398
RKV+LATNIAETSVTI GI YVIDPGF K +D G+E L VV ISKA A QR+G
Sbjct: 631 KDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAG 690
Query: 399 RAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 457
RAGR GPGKCFRLY + +LE+ PEI+R NL NV+L LK+LG+ D++ FDF++ P
Sbjct: 691 RAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPP 750
Query: 458 SRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLIT 517
+ +++ +LEQL+ LGAL +L+ +G +MA P DP SK +I + ++ C EE++
Sbjct: 751 PQETLVIALEQLYALGALNHRGELTK-LGRRMAEFPCDPCMSKMIIASEKYECSEEIVTI 809
Query: 518 VAMLSVES-IFFRSPGEV 534
AMLS + +F+R +V
Sbjct: 810 AAMLSCNAAVFYRPKAQV 827
Score = 360 (131.8 bits), Expect = 7.8e-114, Sum P(2) = 7.8e-114
Identities = 73/160 (45%), Positives = 101/160 (63%)
Query: 26 DSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCR 85
++ ++ I + RKSLP+ + +E V+++ +LII GETGSGKTTQLPQ+L+ AGFC
Sbjct: 349 EAEKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCE 408
Query: 86 DGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK--------- 136
GK IG TQP +E G +LG +VGYSIRF+D TS T +K
Sbjct: 409 GGKRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLR 468
Query: 137 EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
E L +P L+ YS +++DEAHERT+HTD+L GL+K + R
Sbjct: 469 EFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFR 508
Score = 37 (18.1 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 163 DVLLGLLKKVQNARSKSAD 181
D L+GLL++V+ S D
Sbjct: 882 DQLVGLLERVEIETKSSTD 900
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 783 (280.7 bits), Expect = 7.8e-114, Sum P(2) = 7.8e-114
Identities = 159/318 (50%), Positives = 219/318 (68%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LKL+I SA+LDA FS +F A + GR+FPV+I YT PE DY+DA ++TI Q+HL
Sbjct: 511 LKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLT 570
Query: 280 EA-PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAA 338
+ PGDILVFLTGQEEIE+V+ + ER L ++L+ +P++++LPS+ Q ++F P
Sbjct: 571 QPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTP 630
Query: 339 AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSG 398
RKV+LATNIAETSVTI GI YVIDPGF K +D G+E L VV ISKA A QR+G
Sbjct: 631 KDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAG 690
Query: 399 RAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 457
RAGR GPGKCFRLY + +LE+ PEI+R NL NV+L LK+LG+ D++ FDF++ P
Sbjct: 691 RAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPP 750
Query: 458 SRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLIT 517
+ +++ +LEQL+ LGAL +L+ +G +MA P DP SK +I + ++ C EE++
Sbjct: 751 PQETLVIALEQLYALGALNHRGELTK-LGRRMAEFPCDPCMSKMIIASEKYECSEEIVTI 809
Query: 518 VAMLSVES-IFFRSPGEV 534
AMLS + +F+R +V
Sbjct: 810 AAMLSCNAAVFYRPKAQV 827
Score = 360 (131.8 bits), Expect = 7.8e-114, Sum P(2) = 7.8e-114
Identities = 73/160 (45%), Positives = 101/160 (63%)
Query: 26 DSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCR 85
++ ++ I + RKSLP+ + +E V+++ +LII GETGSGKTTQLPQ+L+ AGFC
Sbjct: 349 EAEKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCE 408
Query: 86 DGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK--------- 136
GK IG TQP +E G +LG +VGYSIRF+D TS T +K
Sbjct: 409 GGKRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLR 468
Query: 137 EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
E L +P L+ YS +++DEAHERT+HTD+L GL+K + R
Sbjct: 469 EFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFR 508
Score = 37 (18.1 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 163 DVLLGLLKKVQNARSKSAD 181
D L+GLL++V+ S D
Sbjct: 882 DQLVGLLERVEIETKSSTD 900
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 801 (287.0 bits), Expect = 9.9e-114, Sum P(2) = 9.9e-114
Identities = 157/317 (49%), Positives = 227/317 (71%)
Query: 219 PLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHL 278
PLK+I+MSA++D FS+YF A ++++GRQ P+++ YT P+ DYL A L+++FQ+H
Sbjct: 224 PLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIH- 282
Query: 279 DEAPG--DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAP 336
EAP DILVFLTGQEEIE++ + ++ LP+ ++ +P+++SLP QQ+RVF
Sbjct: 283 QEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQG 342
Query: 337 AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQR 396
A G+RKVI++TNIAETS+TI GIKYV+D G VKA+ Y+P G+E L V +SK QA QR
Sbjct: 343 APKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 402
Query: 397 SGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEK 456
+GRAGRE G C+RLY E+EF+K + T PEI+RCNL++V+LQL A+ V +++ FDFM K
Sbjct: 403 TGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSK 462
Query: 457 PSRASIIKSLEQLFLLGALT--DDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEM 514
PS I ++ QL LLGAL DD P+G +MA PL+P ++K ++++ +F+C EE+
Sbjct: 463 PSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEI 522
Query: 515 LITVAMLSVESIFFRSP 531
L V++LSV+S+ P
Sbjct: 523 LTIVSLLSVDSVLHNPP 539
Score = 341 (125.1 bits), Expect = 9.9e-114, Sum P(2) = 9.9e-114
Identities = 73/167 (43%), Positives = 101/167 (60%)
Query: 22 PFFNDSSSRRQKILQ-QRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH 80
P S+S + ++ QR+SLPI +L+ ++R D +++GETGSGKTTQ+PQ+L+
Sbjct: 54 PLAQPSASPYPEAVELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYE 113
Query: 81 AGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---- 136
G R G +I VTQP +E ELG+ VGY++RFDD TS TRIK
Sbjct: 114 GGISRQG-IIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTD 172
Query: 137 -----EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 178
EA+ D L +YS +I+DEAHERT+HTDVL G++K Q R +
Sbjct: 173 GMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKE 219
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 808 (289.5 bits), Expect = 3.4e-113, Sum P(2) = 3.4e-113
Identities = 159/317 (50%), Positives = 230/317 (72%)
Query: 219 PLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHL 278
PLK+++MSA++D FS+YF A ++++GRQ P++I YT P+ DYL A L+++FQ+H
Sbjct: 231 PLKVLVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQIFYTKQPQHDYLHAALVSVFQIH- 289
Query: 279 DEAPG--DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAP 336
EAP DILVFLTGQEEIE++ + ++ LP+ ++ +P+++SLP QQ+RVF
Sbjct: 290 QEAPSSHDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQR 349
Query: 337 AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQR 396
A G+RKVI++TNIAETS+TI GIKYV+D G VKA+ Y+P G+E L V +SK QA QR
Sbjct: 350 APKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 409
Query: 397 SGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEK 456
+GRAGRE G C+RLY E+EF+K E T PEI+RCNL++V+LQL A+ + +++ FDFM K
Sbjct: 410 TGRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVMLQLLAMKIPNVLTFDFMSK 469
Query: 457 PSRASIIKSLEQLFLLGALTD-DCKLS-DPVGHQMARLPLDPIYSKALIVAGQFNCLEEM 514
PS I ++ QL LLGAL D +L+ P+G +MA PL+P ++K ++++ +F+C EE+
Sbjct: 470 PSPDHIQAAIAQLELLGALEHRDGQLTLTPMGRKMAAFPLEPKFAKTILLSPKFHCTEEI 529
Query: 515 LITVAMLSVESIFFRSP 531
L VA+LSV+SI + P
Sbjct: 530 LTIVALLSVDSILYNPP 546
Score = 329 (120.9 bits), Expect = 3.4e-113, Sum P(2) = 3.4e-113
Identities = 69/156 (44%), Positives = 96/156 (61%)
Query: 32 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG 91
+ + QQR++LPI +L+ ++R D +++GETGSGKTTQ+PQ+L+ G R +I
Sbjct: 72 EAVEQQRRNLPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYLYEGGIGRQA-IIA 130
Query: 92 VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDP 142
VTQP +E ELG+ VGY++RFDD TS T+IK EA+ D
Sbjct: 131 VTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSDDTKIKFLTDGMLLREAISDC 190
Query: 143 YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 178
L +YS II+DEAHERT+HTDVL G++K Q R +
Sbjct: 191 LLRKYSCIILDEAHERTLHTDVLFGVVKAAQKRRKE 226
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 809 (289.8 bits), Expect = 4.2e-112, Sum P(2) = 4.2e-112
Identities = 166/331 (50%), Positives = 233/331 (70%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
RK A KLI+ SA+LDA FS YF + + G+ FPVEIL++ PE DY++A+LIT+
Sbjct: 772 RKRADFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVL 831
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRK-LVTVPIFSSLPSEQQMRV 333
+HL+E PGDILVFLTGQ+EI + ++ ER+ +L S L+ +PI+SSLPSE Q +
Sbjct: 832 NIHLNEHPGDILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVI 891
Query: 334 FAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQA 393
F PA G RK ILATNIAE S+TI GI +VIDPGF K + YD + M+SL+V PISKA A
Sbjct: 892 FEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANA 951
Query: 394 LQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFD 452
QR+GRAGR GPGKC+RLY E + +++ + + PEI+R NL +++L LKALG++D + FD
Sbjct: 952 KQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFD 1011
Query: 453 FMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLE 512
FM+ PS ++I SLE L+ LGAL D+ L+ +G +MA P++P SK L+ + FNC +
Sbjct: 1012 FMDSPSVETLIHSLENLYYLGALDDNGYLTK-LGKKMANFPMEPNLSKILLTSLNFNCTD 1070
Query: 513 EMLITVAMLSVESIFFRSPGE-VRRGKKCNE 542
+++ V+MLSV++IF+R + + KK N+
Sbjct: 1071 DVVTIVSMLSVQNIFYRPQNKALLADKKKNK 1101
Score = 332 (121.9 bits), Expect = 4.2e-112, Sum P(2) = 4.2e-112
Identities = 73/153 (47%), Positives = 95/153 (62%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
I +QR LPI +++ L++ + KN++LI++GETGSGKTTQ+PQ+L A + G ++G T
Sbjct: 624 INEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKG-IVGCT 682
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 144
QP EE G LGQ VGYSIRFDD TS T IK E L D L
Sbjct: 683 QPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLL 742
Query: 145 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
++YS II+DEAHERT+ TD+L LLK V R+
Sbjct: 743 TKYSFIILDEAHERTISTDILFCLLKDVVRKRA 775
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 809 (289.8 bits), Expect = 4.2e-112, Sum P(2) = 4.2e-112
Identities = 166/331 (50%), Positives = 233/331 (70%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
RK A KLI+ SA+LDA FS YF + + G+ FPVEIL++ PE DY++A+LIT+
Sbjct: 772 RKRADFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVL 831
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRK-LVTVPIFSSLPSEQQMRV 333
+HL+E PGDILVFLTGQ+EI + ++ ER+ +L S L+ +PI+SSLPSE Q +
Sbjct: 832 NIHLNEHPGDILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVI 891
Query: 334 FAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQA 393
F PA G RK ILATNIAE S+TI GI +VIDPGF K + YD + M+SL+V PISKA A
Sbjct: 892 FEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANA 951
Query: 394 LQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFD 452
QR+GRAGR GPGKC+RLY E + +++ + + PEI+R NL +++L LKALG++D + FD
Sbjct: 952 KQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFD 1011
Query: 453 FMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLE 512
FM+ PS ++I SLE L+ LGAL D+ L+ +G +MA P++P SK L+ + FNC +
Sbjct: 1012 FMDSPSVETLIHSLENLYYLGALDDNGYLTK-LGKKMANFPMEPNLSKILLTSLNFNCTD 1070
Query: 513 EMLITVAMLSVESIFFRSPGE-VRRGKKCNE 542
+++ V+MLSV++IF+R + + KK N+
Sbjct: 1071 DVVTIVSMLSVQNIFYRPQNKALLADKKKNK 1101
Score = 332 (121.9 bits), Expect = 4.2e-112, Sum P(2) = 4.2e-112
Identities = 73/153 (47%), Positives = 95/153 (62%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
I +QR LPI +++ L++ + KN++LI++GETGSGKTTQ+PQ+L A + G ++G T
Sbjct: 624 INEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKG-IVGCT 682
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 144
QP EE G LGQ VGYSIRFDD TS T IK E L D L
Sbjct: 683 QPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLL 742
Query: 145 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
++YS II+DEAHERT+ TD+L LLK V R+
Sbjct: 743 TKYSFIILDEAHERTISTDILFCLLKDVVRKRA 775
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 796 (285.3 bits), Expect = 6.2e-112, Sum P(2) = 6.2e-112
Identities = 159/322 (49%), Positives = 228/322 (70%)
Query: 216 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+F P LK+++ SA+LD FS +F A + GR+FPV+I YT PE DYL+A ++++
Sbjct: 544 RFRPELKVLVASATLDTARFSAFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVL 603
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q R+F
Sbjct: 604 QIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIF 663
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
P G RKV++ATNIAETS+TI GI YV+DPGF K + Y+P GMESL V P SKA A
Sbjct: 664 QPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASAN 723
Query: 395 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR GKCFRLY + +LE++T PEI+R +L NV+L LK+LG+ D++ FDF
Sbjct: 724 QRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDF 783
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
++ P +++ +LEQL+ LGAL +L+ G +MA LP+DP+ SK ++ + +++C EE
Sbjct: 784 LDPPPYETLLLALEQLYALGALNHLGELTTS-GRKMAELPVDPMLSKMILASEKYSCSEE 842
Query: 514 MLITVAMLSVE-SIFFRSPGEV 534
+L AMLSV SIF+R +V
Sbjct: 843 ILTVAAMLSVNNSIFYRPKDKV 864
Score = 329 (120.9 bits), Expect = 6.2e-112, Sum P(2) = 6.2e-112
Identities = 71/166 (42%), Positives = 98/166 (59%)
Query: 20 SKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLF 79
S P + + +++ I R+SLP+ + L+ + + +LII GETGSGKTTQ+PQ+LF
Sbjct: 381 SGPPLSAQAQQKESIQAVRRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLF 440
Query: 80 HAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTST--R--- 134
G+ + G I TQP E GV+LG VGYSIRF+D TS T R
Sbjct: 441 EEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT 500
Query: 135 ----IKEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
++E L +P L+ YS ++VDEAHERT+HTD+L GL+K V R
Sbjct: 501 DGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 546
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 796 (285.3 bits), Expect = 1.3e-111, Sum P(2) = 1.3e-111
Identities = 159/322 (49%), Positives = 228/322 (70%)
Query: 216 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+F P LK+++ SA+LD FS +F A + GR+FPV+I YT PE DYL+A ++++
Sbjct: 545 RFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVL 604
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q R+F
Sbjct: 605 QIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIF 664
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
P G RKV++ATNIAETS+TI GI YV+DPGF K + Y+P GMESL V P SKA A
Sbjct: 665 QPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASAN 724
Query: 395 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR GKCFRLY + +LE++T PEI+R +L NV+L LK+LG+ D++ FDF
Sbjct: 725 QRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDF 784
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
++ P +++ +LEQL+ LGAL +L+ G +MA LP+DP+ SK ++ + +++C EE
Sbjct: 785 LDPPPYETLLLALEQLYALGALNHLGELTTS-GRKMAELPVDPMLSKMILASEKYSCSEE 843
Query: 514 MLITVAMLSVE-SIFFRSPGEV 534
+L AMLSV SIF+R +V
Sbjct: 844 ILTVAAMLSVNNSIFYRPKDKV 865
Score = 326 (119.8 bits), Expect = 1.3e-111, Sum P(2) = 1.3e-111
Identities = 71/158 (44%), Positives = 95/158 (60%)
Query: 28 SSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDG 87
+ +++ I R+SLP+ + L+ V + ILII GETGSGKTTQ+PQ+LF G+ + G
Sbjct: 390 AQQKESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKG 449
Query: 88 KLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTST--R-------IKEA 138
I TQP E GV+LG VGYSIRF+D TS T R ++E
Sbjct: 450 MKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREF 509
Query: 139 LLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
L +P L+ YS ++VDEAHERT+HTD+L GL+K V R
Sbjct: 510 LSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 547
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 796 (285.3 bits), Expect = 1.3e-111, Sum P(2) = 1.3e-111
Identities = 159/322 (49%), Positives = 228/322 (70%)
Query: 216 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+F P LK+++ SA+LD FS +F A + GR+FPV+I YT PE DYL+A ++++
Sbjct: 545 RFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVL 604
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q R+F
Sbjct: 605 QIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIF 664
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
P G RKV++ATNIAETS+TI GI YV+DPGF K + Y+P GMESL V P SKA A
Sbjct: 665 QPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASAN 724
Query: 395 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR GKCFRLY + +LE++T PEI+R +L NV+L LK+LG+ D++ FDF
Sbjct: 725 QRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDF 784
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
++ P +++ +LEQL+ LGAL +L+ G +MA LP+DP+ SK ++ + +++C EE
Sbjct: 785 LDPPPYETLLLALEQLYALGALNHLGELTTS-GRKMAELPVDPMLSKMILASEKYSCSEE 843
Query: 514 MLITVAMLSVE-SIFFRSPGEV 534
+L AMLSV SIF+R +V
Sbjct: 844 ILTVAAMLSVNNSIFYRPKDKV 865
Score = 326 (119.8 bits), Expect = 1.3e-111, Sum P(2) = 1.3e-111
Identities = 71/158 (44%), Positives = 95/158 (60%)
Query: 28 SSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDG 87
+ +++ I R+SLP+ + L+ V + ILII GETGSGKTTQ+PQ+LF G+ + G
Sbjct: 390 AQQKESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKG 449
Query: 88 KLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTST--R-------IKEA 138
I TQP E GV+LG VGYSIRF+D TS T R ++E
Sbjct: 450 MKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREF 509
Query: 139 LLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
L +P L+ YS ++VDEAHERT+HTD+L GL+K V R
Sbjct: 510 LSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 547
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 795 (284.9 bits), Expect = 1.6e-111, Sum P(2) = 1.6e-111
Identities = 159/322 (49%), Positives = 228/322 (70%)
Query: 216 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+F P LK+++ SA+LD FS +F A + GR+FPV+I YT PE DYL+A ++++
Sbjct: 545 RFRPELKVLVASATLDTARFSTFFDDAPIFRIPGRRFPVDIFYTKAPEADYLEACVVSVL 604
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q R+F
Sbjct: 605 QIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIF 664
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
P G RKV++ATNIAETS+TI GI YV+DPGF K + Y+P GMESL V P SKA A
Sbjct: 665 QPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASAN 724
Query: 395 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR GKCFRLY + +LE++T PEI+R +L NV+L LK+LG+ D++ FDF
Sbjct: 725 QRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDF 784
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
++ P +++ +LEQL+ LGAL +L+ G +MA LP+DP+ SK ++ + +++C EE
Sbjct: 785 LDPPPYETLLLALEQLYALGALNHLGELTTS-GRKMAELPVDPMLSKMILASEKYSCSEE 843
Query: 514 MLITVAMLSVE-SIFFRSPGEV 534
+L AMLSV SIF+R +V
Sbjct: 844 ILTVAAMLSVNNSIFYRPKDKV 865
Score = 326 (119.8 bits), Expect = 1.6e-111, Sum P(2) = 1.6e-111
Identities = 71/166 (42%), Positives = 97/166 (58%)
Query: 20 SKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLF 79
S P + +++ I R+SLP+ + L+ + + +LII GETGSGKTTQ+PQ+LF
Sbjct: 382 SAPPAPTQAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLF 441
Query: 80 HAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTST--R--- 134
G+ + G I TQP E GV+LG VGYSIRF+D TS T R
Sbjct: 442 EEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT 501
Query: 135 ----IKEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
++E L +P L+ YS ++VDEAHERT+HTD+L GL+K V R
Sbjct: 502 DGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 547
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 794 (284.6 bits), Expect = 1.6e-111, Sum P(2) = 1.6e-111
Identities = 158/322 (49%), Positives = 228/322 (70%)
Query: 216 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+F P LK+++ SA++D FS +F A + GR+FPV+I YT PE DYL+A ++++
Sbjct: 541 RFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVL 600
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q R+F
Sbjct: 601 QIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIF 660
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
P G RKV++ATNIAETS+TI GI YV+DPGF K + Y+P GMESL V P SKA A
Sbjct: 661 QPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASAN 720
Query: 395 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR GKCFRLY + +LE++T PEI+R +L NV+L LK+LG+ D++ FDF
Sbjct: 721 QRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDF 780
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
++ P +++ +LEQL+ LGAL +L+ G +MA LP+DP+ SK ++ + +++C EE
Sbjct: 781 LDPPPYETLLLALEQLYALGALNHLGELTTS-GRKMAELPVDPMLSKMILASEKYSCSEE 839
Query: 514 MLITVAMLSVE-SIFFRSPGEV 534
+L AMLSV SIF+R +V
Sbjct: 840 ILTVAAMLSVNNSIFYRPKDKV 861
Score = 327 (120.2 bits), Expect = 1.6e-111, Sum P(2) = 1.6e-111
Identities = 71/166 (42%), Positives = 97/166 (58%)
Query: 20 SKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLF 79
S P + + +++ I R+SLP+ + L+ + + +LII GETGSGKTTQ+PQ+LF
Sbjct: 378 SAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLF 437
Query: 80 HAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTST--R--- 134
G+ G I TQP E GV+LG VGYSIRF+D TS T R
Sbjct: 438 EEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT 497
Query: 135 ----IKEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
++E L +P L+ YS ++VDEAHERT+HTD+L GL+K V R
Sbjct: 498 DGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 543
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 796 (285.3 bits), Expect = 2.1e-111, Sum P(2) = 2.1e-111
Identities = 159/322 (49%), Positives = 228/322 (70%)
Query: 216 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+F P LK+++ SA+LD FS +F A + GR+FPV+I YT PE DYL+A ++++
Sbjct: 542 RFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVL 601
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q R+F
Sbjct: 602 QIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIF 661
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
P G RKV++ATNIAETS+TI GI YV+DPGF K + Y+P GMESL V P SKA A
Sbjct: 662 QPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASAN 721
Query: 395 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR GKCFRLY + +LE++T PEI+R +L NV+L LK+LG+ D++ FDF
Sbjct: 722 QRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDF 781
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
++ P +++ +LEQL+ LGAL +L+ G +MA LP+DP+ SK ++ + +++C EE
Sbjct: 782 LDPPPYETLLLALEQLYALGALNHLGELTTS-GRKMAELPVDPMLSKMILASEKYSCSEE 840
Query: 514 MLITVAMLSVE-SIFFRSPGEV 534
+L AMLSV SIF+R +V
Sbjct: 841 ILTVAAMLSVNNSIFYRPKDKV 862
Score = 324 (119.1 bits), Expect = 2.1e-111, Sum P(2) = 2.1e-111
Identities = 70/166 (42%), Positives = 97/166 (58%)
Query: 20 SKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLF 79
S P + +++ + R+SLP+ + L+ + + +LII GETGSGKTTQ+PQ+LF
Sbjct: 379 SGPSPPSQAQQKESVQAVRRSLPVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLF 438
Query: 80 HAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTST--R--- 134
G+ + G I TQP E GV+LG VGYSIRF+D TS T R
Sbjct: 439 EEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT 498
Query: 135 ----IKEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
++E L +P L+ YS ++VDEAHERT+HTD+L GL+K V R
Sbjct: 499 DGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 544
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 782 (280.3 bits), Expect = 8.3e-111, Sum P(2) = 8.3e-111
Identities = 161/359 (44%), Positives = 241/359 (67%)
Query: 193 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 246
S +I+D ++ + +NT LK+ R++ +KLI+ SA++D++ FS +FG +
Sbjct: 774 SAIIMDEAHERS-LNTDVLFGILKKVMSRRY-DMKLIVTSATMDSKKFSMFFGDVPVFTI 831
Query: 247 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 306
GR FPV++L++ P DY+D+ + I +H+ + GDILVF+TGQE+IE+ V+ER+
Sbjct: 832 PGRTFPVDVLWSKTPCEDYVDSAVKQILSIHVTQGVGDILVFMTGQEDIETTCATVEERI 891
Query: 307 LQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 366
QL + L +PI+S LPS+ Q ++F A G RK I+ATNIAETS+T+ GI YVID
Sbjct: 892 KQLGPQAPPLTLLPIYSQLPSDMQAKIFEKADNGSRKCIIATNIAETSLTVDGILYVIDT 951
Query: 367 GFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTK 425
G+ K ++Y+P GM+SL V PISKA A QRSGRAGR GPG+C+RLY E+ F +L D+
Sbjct: 952 GYCKLKVYNPRVGMDSLQVTPISKANANQRSGRAGRTGPGRCYRLYTESAFKYELMDNNI 1011
Query: 426 PEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPV 485
PEI+R NL NV+L LK++GV +++ FDFM+ P + +I+ S+ QL++LGAL D +++ P+
Sbjct: 1012 PEIQRTNLGNVVLNLKSMGVKNLLDFDFMDPPPQDNILNSMYQLWVLGALDDQGQIT-PL 1070
Query: 486 GHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIF 544
G +M+ PLDP SK +IVA Q C ++++ V+MLS+ S+F+R G E F
Sbjct: 1071 GKRMSEFPLDPPLSKMVIVAEQLGCGQDIVTIVSMLSMPSVFYRPKGAEEESDASREKF 1129
Score = 351 (128.6 bits), Expect = 8.3e-111, Sum P(2) = 8.3e-111
Identities = 80/167 (47%), Positives = 105/167 (62%)
Query: 20 SKPFFNDSS-SRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFL 78
+KP S S+ + I +QR+ LPI L++ +R+N+++IIVGETGSGKTTQL Q+L
Sbjct: 637 NKPTEGSSEFSKTKTIKEQREFLPIFGCRNDLMKIIRENNVIIIVGETGSGKTTQLVQYL 696
Query: 79 FHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK-- 136
+ G+ + GK IG TQP EE V LG VGYSIRF+D TS T IK
Sbjct: 697 YEDGYSKFGK-IGCTQPRRVAAVSVAKRVSEEMSVTLGNEVGYSIRFEDCTSNETAIKYM 755
Query: 137 -------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
E+ DP L +YSAII+DEAHER+++TDVL G+LKKV + R
Sbjct: 756 TDGILLRESFNDPNLDKYSAIIMDEAHERSLNTDVLFGILKKVMSRR 802
Score = 38 (18.4 bits), Expect = 8.8e-78, Sum P(2) = 8.8e-78
Identities = 11/52 (21%), Positives = 22/52 (42%)
Query: 25 NDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQ 76
N+SSS + L K + + + E K ++ T + + ++PQ
Sbjct: 79 NNSSSGERTSLSFTKDTSTTTQSNQPLAETMKGGLITRKNSTNNDEQFKIPQ 130
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 784 (281.0 bits), Expect = 3.9e-110, Sum P(2) = 3.9e-110
Identities = 157/332 (47%), Positives = 228/332 (68%)
Query: 216 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+F P LK++I SA++DA FS YF A +V GR++PV+I YT PE +Y+ A + TI
Sbjct: 560 RFRPDLKVLISSATIDAEKFSAYFDEAPVFYVPGRRYPVDIYYTPQPEANYIQAAITTIL 619
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+H + GDILVFLTGQ+EIE + +QE L + +++ PI+++LPSE Q ++F
Sbjct: 620 QIHTTQPAGDILVFLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIF 679
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
P G RKV+LATNIAETS+TI G+ +VID GFVK +Y+P GMESL+ VP S+A A
Sbjct: 680 DPTPPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASAD 739
Query: 395 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR GPGKCFRLY ++ +L+ T PEI+R NL+N++L LK+LG+++++ FDF
Sbjct: 740 QRAGRAGRVGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDF 799
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
M+ P ++++SLE L+ LGAL + +L+ +G QMA P DP+ SK+LI + ++ C+EE
Sbjct: 800 MDAPPPETLMRSLELLYALGALNNRGELTK-LGRQMAEFPTDPMLSKSLIASSKYGCVEE 858
Query: 514 MLITVAMLS-VESIFFRSPGEVRRGKKCNEIF 544
+L V+ML S+F+R ++ K F
Sbjct: 859 VLSIVSMLGEASSLFYRPKDKIMEADKARANF 890
Score = 324 (119.1 bits), Expect = 3.9e-110, Sum P(2) = 3.9e-110
Identities = 72/155 (46%), Positives = 94/155 (60%)
Query: 32 QKILQQ-RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 90
+K L+ RKSLP+ + L++ + + +L+IV ETGSGKTTQLPQFL AG+ + K I
Sbjct: 408 EKSLESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKI 467
Query: 91 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 141
TQP +E V LGQ VGYSIRF++ TS T IK E L +
Sbjct: 468 CCTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTE 527
Query: 142 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
P L+ YS II+DEAHERT+HTD+L GL+K + R
Sbjct: 528 PDLASYSVIIIDEAHERTLHTDILFGLVKDIARFR 562
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 787 (282.1 bits), Expect = 8.0e-110, Sum P(2) = 8.0e-110
Identities = 149/313 (47%), Positives = 233/313 (74%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LK+II SA+++A FS++F A +++ GR+FPV+I YT PE +Y+ A + TIFQ+H+
Sbjct: 379 LKIIIASATINAEKFSQFFNNAPILNIPGRRFPVKIHYTKQPEANYIQAAITTIFQIHMT 438
Query: 280 EA-PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAA 338
+ PGDILVFLTGQ+EIE++E ++++ +L+L + ++ I+++LP E Q ++F P
Sbjct: 439 QPLPGDILVFLTGQDEIETMEEILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTP 498
Query: 339 AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSG 398
+ RK++LATNIAETS+TI GI YVIDPG+VK +Y+P GMESL+VVP S+A A QR+G
Sbjct: 499 SNTRKIVLATNIAETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAG 558
Query: 399 RAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 457
RAGR GPGKCFRL+ + F ++L+ + +PEI+R NL++VIL L +LG++D++GF+FM+ P
Sbjct: 559 RAGRVGPGKCFRLFTKWSFYNELDSNQQPEIQRVNLTSVILLLLSLGINDLLGFEFMDPP 618
Query: 458 SRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLIT 517
S+ +IIK+L L+ LGAL KL+ G +M+ PLDP+++K ++ + +F+ ++++
Sbjct: 619 SKEAIIKALNLLYALGALNTQGKLTK-TGKKMSEFPLDPVFTKCILTSDKFDNTKQIISI 677
Query: 518 VAMLSVES-IFFR 529
+AML+ S +F+R
Sbjct: 678 IAMLNESSNLFYR 690
Score = 318 (117.0 bits), Expect = 8.0e-110, Sum P(2) = 8.0e-110
Identities = 67/151 (44%), Positives = 91/151 (60%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXX 97
RKSLP+ S + ++ + +N LI+VGETGSGKTTQLPQ+L AG+ R+ ++I TQP
Sbjct: 226 RKSLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLHEAGYSRNNQVIACTQPRR 285
Query: 98 XXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----------KEALLDPYLSRY 147
E V+LG++VGY+IRFDD + +E L DP L +Y
Sbjct: 286 VAATSVANRVANEMQVKLGEQVGYNIRFDDNCKDGVTVIKYVTDGMLLREFLQDPTLGKY 345
Query: 148 SAIIVDEAHERTVHTDVLLGLLKKVQNARSK 178
SAI++DEAHERT+ T++LL LLK V K
Sbjct: 346 SAIMIDEAHERTLSTEILLSLLKDVMMTTRK 376
Score = 39 (18.8 bits), Expect = 7.0e-25, Sum P(2) = 7.0e-25
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 252 PVEILYTLYPEPDYL 266
P +Y L P+P YL
Sbjct: 823 PSSCIYKLKPKPKYL 837
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 814 (291.6 bits), Expect = 1.3e-109, Sum P(2) = 1.3e-109
Identities = 162/321 (50%), Positives = 231/321 (71%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
RK PLK+I+MSA++D FS+YF A ++++GRQ P+++ YT P+ DYL A L+++F
Sbjct: 130 RKL-PLKVIVMSATMDVDLFSQYFNGASVLYLEGRQHPIQVFYTKQPQQDYLHAALVSVF 188
Query: 275 QVHLDEAPG--DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMR 332
Q+H EAP DILVFLTGQEEIE+V + ++ LP+ ++ +P+++SLP QQ+R
Sbjct: 189 QIH-QEAPSSQDILVFLTGQEEIEAVSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLR 247
Query: 333 VFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQ 392
VF A G RKVI+ATNIAETS+TI GIKYV+D G VKA+ Y+P G+E L V +SK Q
Sbjct: 248 VFQGAPKGCRKVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQ 307
Query: 393 ALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFD 452
A QR+GRAGRE G C+RLY ENEF+K E T PEI+RCNL++V+LQL A+ V +++ FD
Sbjct: 308 AWQRAGRAGREDSGICYRLYTENEFEKFEKMTVPEIQRCNLASVLLQLLAMKVPNVLTFD 367
Query: 453 FMEKPSRASIIKSLEQLFLLGALT-DDCKLS-DPVGHQMARLPLDPIYSKALIVAGQFNC 510
FM KPS + ++ QL LLGAL D +L+ P+G +MA PL+P ++K ++++ +F+C
Sbjct: 368 FMSKPSPDHMQAAVAQLDLLGALERKDNQLTLTPIGRKMAAFPLEPKFAKTILLSPKFHC 427
Query: 511 LEEMLITVAMLSVESIFFRSP 531
EE+L V++LSV+S+ + P
Sbjct: 428 TEEILTIVSLLSVDSVLYNPP 448
Score = 289 (106.8 bits), Expect = 1.3e-109, Sum P(2) = 1.3e-109
Identities = 63/124 (50%), Positives = 77/124 (62%)
Query: 64 GETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSI 123
GETGSGKTTQLPQ+L+ G R G +I VTQP +E ELG+ VGY++
Sbjct: 6 GETGSGKTTQLPQYLYEGGIGRQG-VIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTV 64
Query: 124 RFDDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQN 174
RFDD +S TRIK EA+ D L +YS II+DEAHERTVHTDVL G++K Q
Sbjct: 65 RFDDVSSEDTRIKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVVKAAQR 124
Query: 175 ARSK 178
R +
Sbjct: 125 RRKE 128
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 766 (274.7 bits), Expect = 1.7e-109, Sum P(2) = 1.7e-109
Identities = 157/335 (46%), Positives = 226/335 (67%)
Query: 206 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 254
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 189 IGLLKKIQ-KKRGDLRLIVASATLDAEKFRDFFNQNDTSDPPRDTCV-ILTVEGRTFPVD 246
Query: 255 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 312
I Y P PDY+ +T+ T+ ++H E GDIL FLTGQEE+E+V ++ Q R L
Sbjct: 247 IFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGM 306
Query: 313 SRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 372
R L +P+++ LPS +QM+VF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 373 LYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCN 432
Y+P +E L+VVP+S+A A QR+GRAGR GKC+RLY E+ FD+L ST PE++R N
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQRAGRAGRSRSGKCYRLYTEDAFDQLPQSTVPEMQRSN 426
Query: 433 LSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARL 492
L+ VILQLKALG+D+++ F FM P S++++LE L+ LG L DC+L++P+G ++A
Sbjct: 427 LAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEF 486
Query: 493 PLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 527
PL+P+++K L+ +G F C +E+L AM+ +++IF
Sbjct: 487 PLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIF 521
Score = 336 (123.3 bits), Expect = 1.7e-109, Sum P(2) = 1.7e-109
Identities = 69/153 (45%), Positives = 97/153 (63%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
I QQR+ LP+ + ++ + ++IVGETG GK+TQ+PQ+L AG+ +G+++GVT
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 143
QP EE G LG VGY IRFDD T +TRIK E ++DP
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 144 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
L++YSAI++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 167 LTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKR 199
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 766 (274.7 bits), Expect = 4.4e-109, Sum P(2) = 4.4e-109
Identities = 157/341 (46%), Positives = 226/341 (66%)
Query: 206 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 254
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 189 IGLLKKIQ-KKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCV-ILTVEGRTFPVD 246
Query: 255 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 312
I Y P PDY+ +T+ T+ ++H E GD+L FLTGQEE+E+V ++ Q R L
Sbjct: 247 IFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGM 306
Query: 313 SRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 372
R L +P+++ LPS +QM+VF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 373 LYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCN 432
Y+P +E L+VVP+S+A A QR+GR GR GKC+RLY E FDKL ST PE++R N
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSN 426
Query: 433 LSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARL 492
L+ VILQLKALG+D+++ F FM P S++++LE L+ LG L DC+L++P+G ++A
Sbjct: 427 LAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEF 486
Query: 493 PLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGE 533
PL+P+++K L+ +G F C +E+L AM+ +++IF P +
Sbjct: 487 PLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQ 527
Score = 332 (121.9 bits), Expect = 4.4e-109, Sum P(2) = 4.4e-109
Identities = 68/153 (44%), Positives = 96/153 (62%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
I QQR+ LP+ + ++ + ++IVGETG GK+TQ+PQ+L AG+ +G+++GVT
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 143
QP EE G LG VGY IRFDD T +TRIK E ++DP
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL 166
Query: 144 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
L++YS I++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 167 LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKR 199
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 766 (274.7 bits), Expect = 4.4e-109, Sum P(2) = 4.4e-109
Identities = 157/341 (46%), Positives = 226/341 (66%)
Query: 206 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 254
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 189 IGLLKKIQ-KKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCV-ILTVEGRTFPVD 246
Query: 255 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 312
I Y P PDY+ +T+ T+ ++H E GD+L FLTGQEE+E+V ++ Q R L
Sbjct: 247 IFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGM 306
Query: 313 SRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 372
R L +P+++ LPS +QM+VF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 373 LYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCN 432
Y+P +E L+VVP+S+A A QR+GR GR GKC+RLY E FDKL ST PE++R N
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSN 426
Query: 433 LSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARL 492
L+ VILQLKALG+D+++ F FM P S++++LE L+ LG L DC+L++P+G ++A
Sbjct: 427 LAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEF 486
Query: 493 PLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGE 533
PL+P+++K L+ +G F C +E+L AM+ +++IF P +
Sbjct: 487 PLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQ 527
Score = 332 (121.9 bits), Expect = 4.4e-109, Sum P(2) = 4.4e-109
Identities = 68/153 (44%), Positives = 96/153 (62%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
I QQR+ LP+ + ++ + ++IVGETG GK+TQ+PQ+L AG+ +G+++GVT
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 143
QP EE G LG VGY IRFDD T +TRIK E ++DP
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL 166
Query: 144 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
L++YS I++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 167 LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKR 199
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 771 (276.5 bits), Expect = 5.5e-109, Sum P(2) = 5.5e-109
Identities = 145/311 (46%), Positives = 228/311 (73%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LK+I+ SA+L++ FSEYF +++ G+ FPVE+LY+ P+ DY++A L + +H++
Sbjct: 629 LKVIVTSATLNSAKFSEYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHIN 688
Query: 280 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 339
E PGDILVFLTGQEEI+S ++ +R+ L ++ +L+ +P++S+LPSE Q ++F P
Sbjct: 689 EGPGDILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPK 748
Query: 340 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGR 399
G RKV+ ATNIAETS+TI GI YV+DPGF K +Y+ G+E L+V PIS+AQA QR GR
Sbjct: 749 GSRKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGR 808
Query: 400 AGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPS 458
AGR GPGKC+RLY E+ F +++ ++T PEI+R NLS+ IL LKA+G++D++ FDFM+ P
Sbjct: 809 AGRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPP 868
Query: 459 RASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITV 518
+ ++ +L +L+ L +L D+ KL++ +G +M+ P+DP S++L+ + C +E++ +
Sbjct: 869 KNLMLNALTELYHLQSLDDEGKLTN-LGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTII 927
Query: 519 AMLSVESIFFR 529
+MLSV+++F+R
Sbjct: 928 SMLSVQNVFYR 938
Score = 335 (123.0 bits), Expect = 5.5e-109, Sum P(2) = 5.5e-109
Identities = 74/147 (50%), Positives = 93/147 (63%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
I QR++LP+ ++ L++ VR N L+IVGETGSGKTTQ+ Q+L GF G +IG T
Sbjct: 476 ISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYG-MIGCT 534
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 144
QP EE G ++G VGY+IRF+D T TRIK EALLDP +
Sbjct: 535 QPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEM 594
Query: 145 SRYSAIIVDEAHERTVHTDVLLGLLKK 171
S+YS I++DEAHERTV TDVL LLKK
Sbjct: 595 SKYSVIMLDEAHERTVATDVLFALLKK 621
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 760 (272.6 bits), Expect = 5.6e-109, Sum P(2) = 5.6e-109
Identities = 158/340 (46%), Positives = 225/340 (66%)
Query: 206 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 254
I LK+ Q RK L+L++ SA+LDA F ++F C + V+GR FPV+
Sbjct: 181 IGLLKKIQ-RKRGDLRLLVASATLDAEKFRDFFNQNETSDPTRDTCV-ILTVEGRTFPVD 238
Query: 255 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 312
I Y P PDY+ +T+ T+ ++H E GDIL FLTGQEE+E+V ++ Q R L
Sbjct: 239 IFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGM 298
Query: 313 SRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 372
R L +P+++ LPS +QM+VF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 299 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 358
Query: 373 LYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCN 432
Y+P +E L+V P+S+A A QR+GRAGR GKC+RLY E FDKL T PE++R N
Sbjct: 359 AYNPRTTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSN 418
Query: 433 LSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARL 492
L+ VILQLKALG+D+++ F FM P S++++LE L+ LG L DC+L++P+G ++A
Sbjct: 419 LAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEF 478
Query: 493 PLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPG 532
PL+P+++K L+ +G F C +E+L AM+ +++IF PG
Sbjct: 479 PLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFV-VPG 517
Score = 337 (123.7 bits), Expect = 5.6e-109, Sum P(2) = 5.6e-109
Identities = 70/153 (45%), Positives = 97/153 (63%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
I QQR+ LP+ + ++ V ++IVGETG GK+TQ+PQ+L AG+ +G+++GVT
Sbjct: 39 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 98
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 143
QP EE G LG VGY IRFDD T +TRIK E ++DP
Sbjct: 99 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 158
Query: 144 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
L++YSAI++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 159 LTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKR 191
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 760 (272.6 bits), Expect = 5.6e-109, Sum P(2) = 5.6e-109
Identities = 158/340 (46%), Positives = 225/340 (66%)
Query: 206 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 254
I LK+ Q RK L+L++ SA+LDA F ++F C + V+GR FPV+
Sbjct: 189 IGLLKKIQ-RKRGDLRLLVASATLDAEKFRDFFNQNETSDPTRDTCV-ILTVEGRTFPVD 246
Query: 255 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 312
I Y P PDY+ +T+ T+ ++H E GDIL FLTGQEE+E+V ++ Q R L
Sbjct: 247 IFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGM 306
Query: 313 SRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 372
R L +P+++ LPS +QM+VF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 373 LYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCN 432
Y+P +E L+V P+S+A A QR+GRAGR GKC+RLY E FDKL T PE++R N
Sbjct: 367 AYNPRTTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSN 426
Query: 433 LSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARL 492
L+ VILQLKALG+D+++ F FM P S++++LE L+ LG L DC+L++P+G ++A
Sbjct: 427 LAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEF 486
Query: 493 PLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPG 532
PL+P+++K L+ +G F C +E+L AM+ +++IF PG
Sbjct: 487 PLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFV-VPG 525
Score = 337 (123.7 bits), Expect = 5.6e-109, Sum P(2) = 5.6e-109
Identities = 70/153 (45%), Positives = 97/153 (63%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
I QQR+ LP+ + ++ V ++IVGETG GK+TQ+PQ+L AG+ +G+++GVT
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 143
QP EE G LG VGY IRFDD T +TRIK E ++DP
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 144 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
L++YSAI++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 167 LTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKR 199
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 740 (265.6 bits), Expect = 7.1e-109, Sum P(2) = 7.1e-109
Identities = 152/355 (42%), Positives = 229/355 (64%)
Query: 206 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG---------------CAKAVHVQGRQ 250
+ LK+ R+ L++I+ SA+L A F YF K + ++GR
Sbjct: 156 LGILKKILKRR-PELRIIVSSATLQAEDFLRYFAGDESQQGPNGEVGGNTGKIISIEGRM 214
Query: 251 FPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLP 310
+PV+ L+ +Y++ ++ T+F +HL E GDIL+FLTG+EEIE+ +L+ ER L
Sbjct: 215 YPVDTLFLESAAENYVERSVKTVFDIHLQEGEGDILIFLTGREEIETAIQLISERATTLH 274
Query: 311 EASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVK 370
S+ L+ +P+++ L ++QQM VF PA RKV+++TNIAE SVTI GI YV+D GF K
Sbjct: 275 PKSQSLLPLPLYAGLTTDQQMYVFEPAPENTRKVVVSTNIAEASVTINGIVYVVDCGFAK 334
Query: 371 ARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKR 430
R YDP G+E+L VPISKA A+QR+GRAGR PGKCFRLY ++ +++L D+T PEI+R
Sbjct: 335 LRAYDPSTGIETLTAVPISKAAAVQRAGRAGRTKPGKCFRLYTQHAYEQLPDATIPEIQR 394
Query: 431 CNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMA 490
NL+ VI+QLKALG+D+I+ FDF+ P +I++ E L+ LGA+ D KL+ P+G +MA
Sbjct: 395 SNLAPVIMQLKALGIDNIVRFDFLTSPPADLVIRAFELLYSLGAIDDYAKLTKPLGMRMA 454
Query: 491 RLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVE-SIFFRSPGEVRRGKKCNEIF 544
L +DP+ +K L+ A F CL E+L AM+S++ +++ + G+ + + F
Sbjct: 455 ELAVDPMMAKVLLSAQSFGCLSEILTIAAMVSLQGAVWVQHDGDKKSSESSRRKF 509
Score = 356 (130.4 bits), Expect = 7.1e-109, Sum P(2) = 7.1e-109
Identities = 76/145 (52%), Positives = 96/145 (66%)
Query: 41 LPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXX 100
LPIA ++ ++ V + I+VG+TGSGKTTQLPQ+L AG+C +GK I VTQP
Sbjct: 22 LPIARHKQSILYLVETYPVTIVVGQTGSGKTTQLPQYLDQAGWCTEGKAIAVTQPRRVAA 81
Query: 101 XXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSAII 151
EE +LG+ VGYSIRF+DRTS TRIK EAL+DP LSRYS I+
Sbjct: 82 TTVAARVAEEMRCKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLREALVDPLLSRYSVIM 141
Query: 152 VDEAHERTVHTDVLLGLLKKVQNAR 176
VDEAHER++ TD+LLG+LKK+ R
Sbjct: 142 VDEAHERSLSTDILLGILKKILKRR 166
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 759 (272.2 bits), Expect = 9.1e-109, Sum P(2) = 9.1e-109
Identities = 155/335 (46%), Positives = 224/335 (66%)
Query: 206 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 254
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 189 IGLLKKIQ-KKRGDLRLIVASATLDAEKFRDFFNHNDTSDPTRDTCV-ILTVEGRTFPVD 246
Query: 255 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 312
I Y P PDY+ +T+ T+ ++H E GDIL FLTGQEE+E+V ++ Q R L
Sbjct: 247 IFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGQTGM 306
Query: 313 SRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 372
R L +P+++ LPS +QM+VF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 307 KRHLRILPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 373 LYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCN 432
Y+P +E L+VVP+S+A A QR+GR GR GKC+RLY E FD+L ST PE++R N
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDQLPQSTVPEMQRSN 426
Query: 433 LSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARL 492
L+ VILQLKALG+D+++ F FM P S++++LE L+ LG L DC+L++P+G ++A
Sbjct: 427 LAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEF 486
Query: 493 PLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 527
PL+P+++K L+ +G F C +E+L AM+ ++++F
Sbjct: 487 PLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVF 521
Score = 336 (123.3 bits), Expect = 9.1e-109, Sum P(2) = 9.1e-109
Identities = 68/153 (44%), Positives = 98/153 (64%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
I QQR+ LP+ + ++ + ++I+GETG GK+TQ+PQ+L AG+ +G+++GVT
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIIGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 143
QP EE G LG VGY IRFDD T+ +TRIK E ++DP
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTNPLATRIKFLTDGMLVREMMVDPL 166
Query: 144 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
L++YSAI++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 167 LTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKR 199
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 768 (275.4 bits), Expect = 1.9e-108, Sum P(2) = 1.9e-108
Identities = 163/361 (45%), Positives = 236/361 (65%)
Query: 193 SDMILDRGNDTN-----GINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKA---- 243
S +ILD ++ I LK+ +K L+LI+ SA+LDA+ F ++F ++
Sbjct: 161 SVLILDEAHERTLYTDIAIGLLKKIL-KKRRDLRLIVASATLDAKKFQDFFNLNESGDAS 219
Query: 244 ------VHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIES 297
+ V+GR FPV+I YT+ P PDY+ AT+ T+ ++H E GD+L FLTGQEE+E
Sbjct: 220 KDTCGILTVEGRTFPVDIFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEK 279
Query: 298 VERLVQERLLQLPEASRK--LVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSV 355
V L+QE+ L K L +P+++ LP +QMRVF A RKV++ATNIAETS+
Sbjct: 280 VVSLLQEQARTLSRYGMKKHLCVLPMYAGLPYNEQMRVFERMAPTVRKVVVATNIAETSI 339
Query: 356 TIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPEN 415
TI G+ +VID FVK R Y+P +ESL+V PISKA A QR+GRAGR GKCFRLY E
Sbjct: 340 TINGVVFVIDCAFVKIRAYNPRTAIESLIVTPISKASACQRAGRAGRNRAGKCFRLYTEE 399
Query: 416 EFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGAL 475
+F+KL +ST PE++R NL+ VILQLKALG+D+++ F F+ P S++++LE LF LG L
Sbjct: 400 DFEKLPESTVPEMQRSNLAPVILQLKALGIDNVLRFSFLSPPPAQSMVQALELLFALGGL 459
Query: 476 TDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVR 535
+L+DP+G +MA PL P+++K L+ +G F C +E++ AM+ +++IF +P R
Sbjct: 460 DQYGRLTDPMGVRMAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFV-APHNQR 518
Query: 536 R 536
+
Sbjct: 519 K 519
Score = 324 (119.1 bits), Expect = 1.9e-108, Sum P(2) = 1.9e-108
Identities = 69/153 (45%), Positives = 94/153 (61%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
I +QR+ LP+ ++ V ++IVGETGSGK+TQ+PQ+L AG+ +GK+IGVT
Sbjct: 37 IEKQRQRLPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLEAGWAAEGKVIGVT 96
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 143
QP EE G LG VGY+IRFDD + +TRIK E + DP
Sbjct: 97 QPRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMSDPL 156
Query: 144 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
L +YS +I+DEAHERT++TD+ +GLLKK+ R
Sbjct: 157 LKKYSVLILDEAHERTLYTDIAIGLLKKILKKR 189
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 751 (269.4 bits), Expect = 5.0e-108, Sum P(2) = 5.0e-108
Identities = 159/359 (44%), Positives = 234/359 (65%)
Query: 193 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 246
S +I+D ++ + +NT L++ R+ + LKLI+ SA++DA F+ +FG H+
Sbjct: 186 SAIIMDEAHERS-LNTDVLFGLLREVVARR-SDLKLIVTSATMDAEKFASFFGNVPIFHI 243
Query: 247 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 306
GR FPV+IL++ P+ DY++A + QVHL APGDIL+F+ GQE+IE + E L
Sbjct: 244 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 303
Query: 307 LQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 366
+L A L +PI+S LPS+ Q ++F A G RK I+ATNIAETS+T+ GI +VID
Sbjct: 304 EELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 362
Query: 367 GFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTK 425
G+ K ++++P GM++L + PIS+A A QRSGRAGR GPG+CFRLY ++ + ++L +T
Sbjct: 363 GYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTV 422
Query: 426 PEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPV 485
PEI+R NL+NV+L LK+LGV D++ F FM+ P +++ S+ QL++LGAL + L+
Sbjct: 423 PEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTS-T 481
Query: 486 GHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIF 544
G M PLDP SK LIV+ C E+L+ V+MLSV +IF+R G + E F
Sbjct: 482 GRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKF 540
Score = 337 (123.7 bits), Expect = 5.0e-108, Sum P(2) = 5.0e-108
Identities = 83/184 (45%), Positives = 112/184 (60%)
Query: 6 EGEVSNSTHNPKL-HSKPFFNDSS--SRRQKILQQRKSLPIASVEKRLVEEVRKNDILII 62
+G+V T H K SS ++++ IL+QR+ LPI +V++ L+ +R N I+I+
Sbjct: 33 DGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIV 92
Query: 63 VGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYS 122
VGETGSGKTTQL Q+L G+ G +IG TQP EE G LG+ VGY+
Sbjct: 93 VGETGSGKTTQLTQYLHEDGYTDYG-MIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYA 151
Query: 123 IRFDDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
IRF+D TS ST IK E+L + L YSAII+DEAHER+++TDVL GLL++V
Sbjct: 152 IRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVV 211
Query: 174 NARS 177
RS
Sbjct: 212 ARRS 215
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 763 (273.6 bits), Expect = 7.5e-108, Sum P(2) = 7.5e-108
Identities = 157/332 (47%), Positives = 224/332 (67%)
Query: 216 KFAPLKLIIMSASLDARGFSEYFG--CAKAVHVQGRQFPVEILYTLYPEPDYLDATLITI 273
K A LKLI+ SA++DA F+++FG C + GR FPVE+ + P DY+DA +
Sbjct: 583 KRADLKLIVTSATMDADKFADFFGGNCPTFT-IPGRTFPVELFHARTPVEDYVDAAVKQA 641
Query: 274 FQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRV 333
+HL GDIL+F+ GQE+IE +++E+L +L EA L +PI+S LPS+ Q ++
Sbjct: 642 VTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGELDEAP-PLAVLPIYSQLPSDLQAKI 700
Query: 334 FAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQA 393
F A G RK I+ATNIAETS+T+ GI +VIDPGF K ++Y+P GM++L + P+S+A A
Sbjct: 701 FQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASA 760
Query: 394 LQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFD 452
QR+GRAGR GPG+C+RLY E +F D+L ST PEI+R NL+NV+L LK+LGVDD++ F
Sbjct: 761 NQRTGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFH 820
Query: 453 FMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLE 512
FM+ P + +++ S+ QL+ LGAL + +L+ P+G +M PLDP SK LI++ + C +
Sbjct: 821 FMDAPPQDNMLNSMYQLWTLGALDNTGQLT-PMGRKMVEFPLDPTLSKMLIMSAEMGCSD 879
Query: 513 EMLITVAMLSVESIFFRSPGEVRRGKKCNEIF 544
E+L V+MLSV +IFFR G E F
Sbjct: 880 EVLTIVSMLSVPAIFFRPKGREEEADAKKEKF 911
Score = 332 (121.9 bits), Expect = 7.5e-108, Sum P(2) = 7.5e-108
Identities = 74/150 (49%), Positives = 99/150 (66%)
Query: 32 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG 91
+ I QQR+ LP+ + ++++ +R+N+++IIVGETGSGKTTQL Q+L GF D LIG
Sbjct: 432 KSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGF-GDSGLIG 490
Query: 92 VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDP 142
TQP +E GV+LGQ VGY+IRF+D TS T IK E L D
Sbjct: 491 CTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDG 550
Query: 143 YLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
L +YSAII+DEAHER+++TDVL GLL++V
Sbjct: 551 SLDQYSAIIMDEAHERSLNTDVLFGLLREV 580
Score = 38 (18.4 bits), Expect = 5.0e-26, Sum P(2) = 5.0e-26
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 292 QEEIESVERLVQERLLQLPEASRKLVTV 319
Q+E+E + ++ + PE+SR++V V
Sbjct: 1090 QKEMER-RKEESDKAFKRPESSRRVVEV 1116
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 763 (273.6 bits), Expect = 7.5e-108, Sum P(2) = 7.5e-108
Identities = 157/332 (47%), Positives = 224/332 (67%)
Query: 216 KFAPLKLIIMSASLDARGFSEYFG--CAKAVHVQGRQFPVEILYTLYPEPDYLDATLITI 273
K A LKLI+ SA++DA F+++FG C + GR FPVE+ + P DY+DA +
Sbjct: 583 KRADLKLIVTSATMDADKFADFFGGNCPTFT-IPGRTFPVELFHARTPVEDYVDAAVKQA 641
Query: 274 FQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRV 333
+HL GDIL+F+ GQE+IE +++E+L +L EA L +PI+S LPS+ Q ++
Sbjct: 642 VTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGELDEAP-PLAVLPIYSQLPSDLQAKI 700
Query: 334 FAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQA 393
F A G RK I+ATNIAETS+T+ GI +VIDPGF K ++Y+P GM++L + P+S+A A
Sbjct: 701 FQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASA 760
Query: 394 LQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFD 452
QR+GRAGR GPG+C+RLY E +F D+L ST PEI+R NL+NV+L LK+LGVDD++ F
Sbjct: 761 NQRTGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFH 820
Query: 453 FMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLE 512
FM+ P + +++ S+ QL+ LGAL + +L+ P+G +M PLDP SK LI++ + C +
Sbjct: 821 FMDAPPQDNMLNSMYQLWTLGALDNTGQLT-PMGRKMVEFPLDPTLSKMLIMSAEMGCSD 879
Query: 513 EMLITVAMLSVESIFFRSPGEVRRGKKCNEIF 544
E+L V+MLSV +IFFR G E F
Sbjct: 880 EVLTIVSMLSVPAIFFRPKGREEEADAKKEKF 911
Score = 332 (121.9 bits), Expect = 7.5e-108, Sum P(2) = 7.5e-108
Identities = 74/150 (49%), Positives = 99/150 (66%)
Query: 32 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG 91
+ I QQR+ LP+ + ++++ +R+N+++IIVGETGSGKTTQL Q+L GF D LIG
Sbjct: 432 KSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGF-GDSGLIG 490
Query: 92 VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDP 142
TQP +E GV+LGQ VGY+IRF+D TS T IK E L D
Sbjct: 491 CTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDG 550
Query: 143 YLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
L +YSAII+DEAHER+++TDVL GLL++V
Sbjct: 551 SLDQYSAIIMDEAHERSLNTDVLFGLLREV 580
Score = 38 (18.4 bits), Expect = 5.0e-26, Sum P(2) = 5.0e-26
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 292 QEEIESVERLVQERLLQLPEASRKLVTV 319
Q+E+E + ++ + PE+SR++V V
Sbjct: 1090 QKEMER-RKEESDKAFKRPESSRRVVEV 1116
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 774 (277.5 bits), Expect = 2.7e-107, Sum P(2) = 2.7e-107
Identities = 166/326 (50%), Positives = 219/326 (67%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LKL++MSA+L+A F EYF A + V GR PVEI YT PE DYL+A + T+ Q+H+
Sbjct: 217 LKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMC 276
Query: 280 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAA- 338
E PGDILVFLTG+EEIE R + + + L + + VP++S+LP Q ++F PA
Sbjct: 277 EPPGDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPV 336
Query: 339 -------AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKA 391
AG RK++++TNIAETS+TI GI YVIDPGF K ++Y+P +ESLLV PISKA
Sbjct: 337 PLTEGGPAG-RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKA 395
Query: 392 QALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGVDDIIG 450
A QRSGRAGR PGKCFRLY E F+ L+ T PEI R NL+N +L LK LG+DD++
Sbjct: 396 SAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVH 455
Query: 451 FDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNC 510
FDFM+ P+ +++++LE L LGAL D+ L+ G M+ PLDP SK LIV+ +FNC
Sbjct: 456 FDFMDPPAPETLMRALEVLNYLGALDDEGNLTK-TGEIMSEFPLDPQMSKMLIVSPEFNC 514
Query: 511 LEEMLITVAMLSVESIFFRSPGEVRR 536
E+L AMLSV + F R P E ++
Sbjct: 515 SNEILSVSAMLSVPNCFVR-PREAQK 539
Score = 307 (113.1 bits), Expect = 2.7e-107, Sum P(2) = 2.7e-107
Identities = 72/163 (44%), Positives = 96/163 (58%)
Query: 28 SSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRD- 86
S R +IL++R+ LP+ + + + N LI+VGETGSGKTTQ+PQF+ A +
Sbjct: 52 SQRYFEILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNS 111
Query: 87 --GK--LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK------ 136
G+ L+G TQP +E V +G+ VGYSIRF+D TS+ T +K
Sbjct: 112 DKGRKWLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGM 171
Query: 137 ---EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
EA+ DP L RY II+DEAHERT+ TDVL GLLK+V R
Sbjct: 172 LLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNR 214
Score = 40 (19.1 bits), Expect = 5.3e-24, Sum P(2) = 5.3e-24
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 399 RAGREGPGKCFRLYPENEFDKLEDSTKPEIKR 430
+ E P CF + N K D+ + ++ R
Sbjct: 566 KQNNEDPNWCFENFVNNRAMKSADNVRQQLVR 597
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 769 (275.8 bits), Expect = 2.7e-107, Sum P(2) = 2.7e-107
Identities = 163/325 (50%), Positives = 217/325 (66%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LKL++MSA+L+A F +YF A + V GR PVEI YT PE DYL+A + T+ Q+H+
Sbjct: 213 LKLVVMSATLEAEKFQDYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMC 272
Query: 280 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 339
E PGDILVFLTG+EEIE R + + + L + + VP++S+LP Q ++F PA
Sbjct: 273 EPPGDILVFLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPE 332
Query: 340 GF-------RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQ 392
RK++++TNIAETS+TI GI YVIDPGF K ++Y+P +ESLLV PISKA
Sbjct: 333 PVTEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKAS 392
Query: 393 ALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGVDDIIGF 451
A QRSGRAGR PGKCFRLY E F+ L+ T PEI R NL+N +L LK LG+DD++ F
Sbjct: 393 AHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 452
Query: 452 DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCL 511
DFM+ P+ +++++LE L LGAL DD L+ G M+ PLDP +K LIV+ +FNC
Sbjct: 453 DFMDPPAPETLMRALEVLNYLGALDDDGNLTK-TGEIMSEFPLDPQMAKMLIVSPEFNCS 511
Query: 512 EEMLITVAMLSVESIFFRSPGEVRR 536
E+L AMLSV + F R P E ++
Sbjct: 512 NEILSVSAMLSVPNCFIR-PREAQK 535
Score = 312 (114.9 bits), Expect = 2.7e-107, Sum P(2) = 2.7e-107
Identities = 78/180 (43%), Positives = 104/180 (57%)
Query: 11 NSTHNPKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGK 70
NS N K + KP+ S R IL++R++LP+ ++ ++ + N LI+VGETGSGK
Sbjct: 36 NSLIN-KWNGKPY----SQRYYDILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGK 90
Query: 71 TTQLPQFLFHA--GFCRDGK---LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRF 125
TTQ+PQF+ A D + L+G TQP EE V +G+ VGYSIRF
Sbjct: 91 TTQIPQFVIDAVDAETSDKRRKWLVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRF 150
Query: 126 DDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
+D +S T +K EA+ DP L RY II+DEAHERT+ TDVL GLLK+V R
Sbjct: 151 EDCSSPRTVLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNR 210
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 750 (269.1 bits), Expect = 5.7e-107, Sum P(2) = 5.7e-107
Identities = 152/335 (45%), Positives = 223/335 (66%)
Query: 206 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 254
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 189 IGLLKKIQ-KKRGDLRLIVASATLDAEKFRDFFNQNETSDPARDTCV-ILTVEGRTFPVD 246
Query: 255 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASR 314
I Y P PDY+ AT+ T+ ++H E GDIL FLTGQEE+E+V ++ E+ L
Sbjct: 247 IFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGM 306
Query: 315 K--LVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 372
K L +P+++ LPS +QM+VF + RKVI+ATN+AETS+TI GI YVID GF+K R
Sbjct: 307 KKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLR 366
Query: 373 LYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCN 432
Y+P +E L+VVP+S+A A QR+GR GR GKC+RLY E F++L ST PE++R N
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSN 426
Query: 433 LSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARL 492
L+ V+LQLKALG+D ++ F FM P S++++LE L+ LG L DC+L++P+G ++A
Sbjct: 427 LAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEF 486
Query: 493 PLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 527
PL+P+++K L+ +G F C +E+L AM+ ++++F
Sbjct: 487 PLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVF 521
Score = 328 (120.5 bits), Expect = 5.7e-107, Sum P(2) = 5.7e-107
Identities = 67/153 (43%), Positives = 96/153 (62%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
I QQR+ LP+ + ++ V ++IVGETG GK+TQ+PQ+L AG+ +G+++GVT
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGVT 106
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 143
QP +E G LG VGY IRFDD T +TRIK E ++DP
Sbjct: 107 QPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 144 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
L++YS +++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 167 LTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKR 199
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 750 (269.1 bits), Expect = 5.7e-107, Sum P(2) = 5.7e-107
Identities = 152/335 (45%), Positives = 223/335 (66%)
Query: 206 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 254
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 189 IGLLKKIQ-KKRGDLRLIVASATLDAEKFRDFFNQNETSDPARDTCV-ILTVEGRTFPVD 246
Query: 255 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASR 314
I Y P PDY+ AT+ T+ ++H E GDIL FLTGQEE+E+V ++ E+ L
Sbjct: 247 IFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGM 306
Query: 315 K--LVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 372
K L +P+++ LPS +QM+VF + RKVI+ATN+AETS+TI GI YVID GF+K R
Sbjct: 307 KKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLR 366
Query: 373 LYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCN 432
Y+P +E L+VVP+S+A A QR+GR GR GKC+RLY E F++L ST PE++R N
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSN 426
Query: 433 LSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARL 492
L+ V+LQLKALG+D ++ F FM P S++++LE L+ LG L DC+L++P+G ++A
Sbjct: 427 LAPVVLQLKALGIDSVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEF 486
Query: 493 PLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 527
PL+P+++K L+ +G F C +E+L AM+ ++++F
Sbjct: 487 PLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVF 521
Score = 328 (120.5 bits), Expect = 5.7e-107, Sum P(2) = 5.7e-107
Identities = 67/153 (43%), Positives = 96/153 (62%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
I QQR+ LP+ + ++ V ++IVGETG GK+TQ+PQ+L AG+ +G+++GVT
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGVT 106
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 143
QP +E G LG VGY IRFDD T +TRIK E ++DP
Sbjct: 107 QPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 144 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
L++YS +++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 167 LTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKR 199
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 746 (267.7 bits), Expect = 5.7e-107, Sum P(2) = 5.7e-107
Identities = 155/342 (45%), Positives = 225/342 (65%)
Query: 206 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG----------CAKAVHVQGRQFPVEI 255
I LK+ Q +K L+LI+ SA+LDA F ++F + + V+GR FPV+I
Sbjct: 189 IGLLKKIQ-KKRGDLRLIVASATLDAEKFRDFFNQNDTGDPSKDTSVILTVEGRTFPVDI 247
Query: 256 LYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEAS 313
Y P PDY+ +T+ T ++H E GDIL FLTGQEE+E+V ++ Q R L
Sbjct: 248 FYIQSPVPDYIKSTVETAMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARALSRTGMR 307
Query: 314 RKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARL 373
+ L +P+++ LPS QM+VF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 308 KHLRVLPMYAGLPSPDQMKVFERVSRSVRKVIVATNVAETSITIHGIAYVIDCGFVKLRA 367
Query: 374 YDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYP--ENEFDKLEDSTKPEIKRC 431
Y+P +E L+VVP+SKA A QR+GRAGR GKC+RLY E +F+KL ST PE++R
Sbjct: 368 YNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYTATEEDFEKLPQSTVPEMQRS 427
Query: 432 NLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMAR 491
NL+ VILQLKALG+D+++ F F+ P S++++LE L+ LG L C+L++P+G ++A
Sbjct: 428 NLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLGMRIAE 487
Query: 492 LPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGE 533
PL+P+++K L+ +G F C +E+L AM+ +++IF P +
Sbjct: 488 FPLNPMFAKMLLESGNFGCSQEILTIAAMMQIQNIFLIPPNQ 529
Score = 332 (121.9 bits), Expect = 5.7e-107, Sum P(2) = 5.7e-107
Identities = 69/153 (45%), Positives = 95/153 (62%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
I QQR+ LP+ + ++ V L+IVGETG GK+TQ+PQ+L AG+ +G+++GVT
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 143
QP +E G LG VGY IRFDD T +TRIK E + DP
Sbjct: 107 QPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPL 166
Query: 144 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
L+RYS +++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 167 LTRYSVLMLDEAHERTLYTDIAIGLLKKIQKKR 199
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 687 (246.9 bits), Expect = 5.8e-107, Sum P(4) = 5.8e-107
Identities = 141/305 (46%), Positives = 203/305 (66%)
Query: 235 SEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEA-PGDILVFLTGQE 293
SE G A H++GRQFPV+ +Y+ P D++DA L IFQ+H E PGDILVFLTGQE
Sbjct: 355 SEKDGIA-VCHIKGRQFPVKTIYSPEPVHDFVDAALKVIFQIHYKEPIPGDILVFLTGQE 413
Query: 294 EIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAET 353
+E++E LV E + + K+ +P+F++LP Q RVF PA RK+ILATNIAET
Sbjct: 414 TVEALENLVNEYATGMDPSLPKIQVLPLFAALPQAAQQRVFVPAPPRTRKIILATNIAET 473
Query: 354 SVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYP 413
SVT+ G++YV+D G K + + G++SLLV PISK+ A+QR GRAGRE PG+C+RLY
Sbjct: 474 SVTVSGVRYVVDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQRKGRAGREAPGQCYRLYT 533
Query: 414 ENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLG 473
E ++ L++ PEI RC+LS IL +KA GVD++I F F+ +P R ++ K+L QL +
Sbjct: 534 EKDYLALDEVNTPEILRCDLSQAILNMKARGVDNVIEFPFLTRPPREALEKALLQLLSIE 593
Query: 474 ALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQF--NCLEEMLITVAMLSVESIFFRSP 531
AL + K+S+ G +A+LPL P + L+ A F +CL +++ ++ LSVE+IF +
Sbjct: 594 ALDETGKISE-TGSHIAKLPLTPTLGRVLLAASDFGPDCLTDVIDIISCLSVENIFLNTT 652
Query: 532 GEVRR 536
E ++
Sbjct: 653 SEEKK 657
Score = 180 (68.4 bits), Expect = 5.8e-107, Sum P(4) = 5.8e-107
Identities = 42/110 (38%), Positives = 59/110 (53%)
Query: 87 GKLIGVTQPXXXXXXXXXXXXXEESGVELGQ-----RVGYSIRFDDRTSTSTRIK----- 136
G I +TQP EE G LG +VGYS+RFD S STR+K
Sbjct: 210 GGCIAITQPRRVAAISLARRVAEEMGTPLGSSSPASKVGYSVRFDTSVSPSTRVKFLTEG 269
Query: 137 ----EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADG 182
E L DP+L++YSAI+VDE HER V+ D+++G L+ + + + + G
Sbjct: 270 MLLQEMLHDPWLTKYSAIVVDEVHERGVNVDLVMGFLRNLVSGKREGRGG 319
Score = 174 (66.3 bits), Expect = 5.8e-107, Sum P(4) = 5.8e-107
Identities = 35/93 (37%), Positives = 57/93 (61%)
Query: 3 SVAEGEVSNSTHNPKLHSKPFFNDSSSRR-------QKILQQRKSLPIASVEKRLVEEVR 55
S+ + + N H K HS+PF ++ + R Q + + RK+LPI + + + +R
Sbjct: 102 SLPKDQPENQKHKRKKHSRPFKDEENGRTASLKKKAQMLYEIRKNLPIFAHGDEIRQHLR 161
Query: 56 KNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK 88
KND+++++GETGSGK+TQ+PQFL +CR K
Sbjct: 162 KNDVMLLIGETGSGKSTQIPQFLVDESWCRPTK 194
Score = 61 (26.5 bits), Expect = 5.8e-107, Sum P(4) = 5.8e-107
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 213 QGRKFAPLKLIIMSASLDARGFSEYF 238
+GR PLK ++MSA+ D E+F
Sbjct: 315 EGRGGVPLKAVVMSATADMESLQEFF 340
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 751 (269.4 bits), Expect = 1.9e-106, Sum P(2) = 1.9e-106
Identities = 159/359 (44%), Positives = 234/359 (65%)
Query: 193 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 246
S +I+D ++ + +NT L++ R+ + LKLI+ SA++DA F+ +FG H+
Sbjct: 647 SAIIMDEAHERS-LNTDVLFGLLREVVARR-SDLKLIVTSATMDAEKFASFFGNVPIFHI 704
Query: 247 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 306
GR FPV+IL++ P+ DY++A + QVHL APGDIL+F+ GQE+IE + E L
Sbjct: 705 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 764
Query: 307 LQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 366
+L A L +PI+S LPS+ Q ++F A G RK I+ATNIAETS+T+ GI +VID
Sbjct: 765 EELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 823
Query: 367 GFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTK 425
G+ K ++++P GM++L + PIS+A A QRSGRAGR GPG+CFRLY ++ + ++L +T
Sbjct: 824 GYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTV 883
Query: 426 PEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPV 485
PEI+R NL+NV+L LK+LGV D++ F FM+ P +++ S+ QL++LGAL + L+
Sbjct: 884 PEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTS-T 942
Query: 486 GHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIF 544
G M PLDP SK LIV+ C E+L+ V+MLSV +IF+R G + E F
Sbjct: 943 GRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKF 1001
Score = 337 (123.7 bits), Expect = 1.9e-106, Sum P(2) = 1.9e-106
Identities = 83/184 (45%), Positives = 112/184 (60%)
Query: 6 EGEVSNSTHNPKL-HSKPFFNDSS--SRRQKILQQRKSLPIASVEKRLVEEVRKNDILII 62
+G+V T H K SS ++++ IL+QR+ LPI +V++ L+ +R N I+I+
Sbjct: 494 DGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIV 553
Query: 63 VGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYS 122
VGETGSGKTTQL Q+L G+ G +IG TQP EE G LG+ VGY+
Sbjct: 554 VGETGSGKTTQLTQYLHEDGYTDYG-MIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYA 612
Query: 123 IRFDDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
IRF+D TS ST IK E+L + L YSAII+DEAHER+++TDVL GLL++V
Sbjct: 613 IRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVV 672
Query: 174 NARS 177
RS
Sbjct: 673 ARRS 676
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 724 (259.9 bits), Expect = 4.4e-106, Sum P(3) = 4.4e-106
Identities = 150/359 (41%), Positives = 239/359 (66%)
Query: 193 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 246
S +I+D ++ + +NT LK+ R+ +KL++ SA+++++ FS++FG A +
Sbjct: 607 SVIIMDEAHERS-LNTDILMGLLKKVLSRR-RDIKLLVTSATMNSQKFSDFFGGAPQFTI 664
Query: 247 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 306
GR +PV+I++ P DY++A + + Q+HL + GDILVF+TGQE+IE+ ++ +RL
Sbjct: 665 PGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADRL 724
Query: 307 LQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 366
QL +A R L +PI+S +P++ Q ++F A G RKV++ATNIAETS+T+ GI YV+D
Sbjct: 725 NQLHDAPR-LSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDT 783
Query: 367 GFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTK 425
G+ K ++Y+ G+++L V PIS+A A QR+GRAGR GPG +RLY E + + + ++T
Sbjct: 784 GYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTL 843
Query: 426 PEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPV 485
PEI+R NLSN +L LK+LGV++I FDFM++P +++ SL +L+ LGAL + KL+ +
Sbjct: 844 PEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGALDNFGKLTT-L 902
Query: 486 GHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIF 544
G +M+ P+DP SK +I+A + C EE++ V+MLSV S+F+R E F
Sbjct: 903 GKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVPSVFYRPKERAEESDAAREKF 961
Score = 343 (125.8 bits), Expect = 4.4e-106, Sum P(3) = 4.4e-106
Identities = 75/157 (47%), Positives = 101/157 (64%)
Query: 29 SRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK 88
+R + +QR+ LP +V ++L+ +R N +LI+VGETGSGKTTQL QFL+ G+ R+G
Sbjct: 480 ARTKSYREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNG- 538
Query: 89 LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EAL 139
+IG TQP EE GV LG VGYSIRF+D T T IK E+L
Sbjct: 539 MIGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESL 598
Query: 140 LDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
+ L +YS II+DEAHER+++TD+L+GLLKKV + R
Sbjct: 599 MQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRR 635
Score = 38 (18.4 bits), Expect = 4.4e-106, Sum P(3) = 4.4e-106
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 3 SVAEGEVSNSTHNPKLHSKPFFNDSSS 29
++A+G S++ + LH+ F+D+ S
Sbjct: 37 TIAKGSSSSTEFSNALHTFGRFSDNDS 63
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 750 (269.1 bits), Expect = 6.5e-106, Sum P(2) = 6.5e-106
Identities = 159/359 (44%), Positives = 234/359 (65%)
Query: 193 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 246
S +I+D ++ + +NT L++ R+ + LKLI+ SA++DA F+ +FG H+
Sbjct: 646 SAVIMDEAHERS-LNTDVLFGLLREVVARR-SDLKLIVTSATMDAEKFAAFFGNVPIFHI 703
Query: 247 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 306
GR FPV+IL++ P+ DY++A + QVHL APGDIL+F+ GQE+IE + E L
Sbjct: 704 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 763
Query: 307 LQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 366
+L A L +PI+S LPS+ Q ++F A G RK I+ATNIAETS+T+ GI +VID
Sbjct: 764 EELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 822
Query: 367 GFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTK 425
G+ K ++++P GM++L + PIS+A A QRSGRAGR GPG+CFRLY ++ + ++L +T
Sbjct: 823 GYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTV 882
Query: 426 PEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPV 485
PEI+R NL+NV+L LK+LGV D++ F FM+ P +++ S+ QL++LGAL + L+
Sbjct: 883 PEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTS-T 941
Query: 486 GHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIF 544
G M PLDP SK LIV+ C E+L+ V+MLSV +IF+R G + E F
Sbjct: 942 GRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKF 1000
Score = 333 (122.3 bits), Expect = 6.5e-106, Sum P(2) = 6.5e-106
Identities = 81/184 (44%), Positives = 112/184 (60%)
Query: 6 EGEVSNSTHNPKL-HSKPFFNDSS--SRRQKILQQRKSLPIASVEKRLVEEVRKNDILII 62
+G+V T H K SS ++++ IL+QR+ LPI +V++ L+ +R N I+I+
Sbjct: 493 DGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIV 552
Query: 63 VGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYS 122
VGETGSGKTTQL Q+L G+ G +IG TQP EE G LG+ VGY+
Sbjct: 553 VGETGSGKTTQLTQYLHEDGYTDYG-MIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYA 611
Query: 123 IRFDDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
IRF+D TS +T IK E+L + L YSA+I+DEAHER+++TDVL GLL++V
Sbjct: 612 IRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAVIMDEAHERSLNTDVLFGLLREVV 671
Query: 174 NARS 177
RS
Sbjct: 672 ARRS 675
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 750 (269.1 bits), Expect = 6.6e-106, Sum P(2) = 6.6e-106
Identities = 159/359 (44%), Positives = 234/359 (65%)
Query: 193 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 246
S +I+D ++ + +NT L++ R+ + LKLI+ SA++DA F+ +FG H+
Sbjct: 647 SAIIMDEAHERS-LNTDVLFGLLREVVARR-SDLKLIVTSATMDAEKFAAFFGNVPIFHI 704
Query: 247 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 306
GR FPV+IL++ P+ DY++A + QVHL APGDIL+F+ GQE+IE + E L
Sbjct: 705 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 764
Query: 307 LQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 366
+L A L +PI+S LPS+ Q ++F A G RK I+ATNIAETS+T+ GI +VID
Sbjct: 765 EELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 823
Query: 367 GFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTK 425
G+ K ++++P GM++L + PIS+A A QRSGRAGR GPG+CFRLY ++ + ++L +T
Sbjct: 824 GYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTV 883
Query: 426 PEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPV 485
PEI+R NL+NV+L LK+LGV D++ F FM+ P +++ S+ QL++LGAL + L+
Sbjct: 884 PEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTS-T 942
Query: 486 GHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIF 544
G M PLDP SK LIV+ C E+L+ V+MLSV +IF+R G + E F
Sbjct: 943 GRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKF 1001
Score = 333 (122.3 bits), Expect = 6.6e-106, Sum P(2) = 6.6e-106
Identities = 82/184 (44%), Positives = 112/184 (60%)
Query: 6 EGEVSNSTHNPKL-HSKPFFNDSS--SRRQKILQQRKSLPIASVEKRLVEEVRKNDILII 62
+G+V T H K SS ++++ IL+QR+ LPI +V++ L+ +R N I+I+
Sbjct: 494 DGKVDYRTEQKFADHMKRKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIV 553
Query: 63 VGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYS 122
VGETGSGKTTQL Q+L G+ G +IG TQP EE G LG+ VGY+
Sbjct: 554 VGETGSGKTTQLTQYLHEDGYTDYG-MIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYA 612
Query: 123 IRFDDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
IRF+D TS +T IK E+L + L YSAII+DEAHER+++TDVL GLL++V
Sbjct: 613 IRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVV 672
Query: 174 NARS 177
RS
Sbjct: 673 ARRS 676
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 748 (268.4 bits), Expect = 8.7e-106, Sum P(2) = 8.7e-106
Identities = 159/359 (44%), Positives = 234/359 (65%)
Query: 193 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 246
S +I+D ++ + +NT L++ R+ + LKLI+ SA++DA F+ +FG H+
Sbjct: 648 SAIIMDEAHERS-LNTDVLFGLLREVVARR-SDLKLIVTSATMDADKFAAFFGNVPIFHI 705
Query: 247 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 306
GR FPV+IL++ P+ DY++A + QVHL APGDIL+F+ GQE+IE + E L
Sbjct: 706 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 765
Query: 307 LQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 366
+L A L +PI+S LPS+ Q ++F A G RK I+ATNIAETS+T+ GI +VID
Sbjct: 766 EELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 824
Query: 367 GFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTK 425
G+ K ++++P GM++L + PIS+A A QRSGRAGR GPG+CFRLY ++ + ++L +T
Sbjct: 825 GYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTV 884
Query: 426 PEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPV 485
PEI+R NL+NV+L LK+LGV D++ F FM+ P +++ S+ QL++LGAL + L+
Sbjct: 885 PEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTS-T 943
Query: 486 GHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIF 544
G M PLDP SK LIV+ C E+L+ V+MLSV +IF+R G + E F
Sbjct: 944 GRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKF 1002
Score = 334 (122.6 bits), Expect = 8.7e-106, Sum P(2) = 8.7e-106
Identities = 82/184 (44%), Positives = 112/184 (60%)
Query: 6 EGEVSNSTHNPKL-HSKPFFNDSS--SRRQKILQQRKSLPIASVEKRLVEEVRKNDILII 62
+G+V T H K SS ++++ IL+QR+ LPI +V++ L+ +R N I+I+
Sbjct: 495 DGKVDYRTEQKFADHMKEKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIV 554
Query: 63 VGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYS 122
VGETGSGKTTQL Q+L G+ G +IG TQP EE G LG+ VGY+
Sbjct: 555 VGETGSGKTTQLTQYLHQDGYTDYG-MIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYA 613
Query: 123 IRFDDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
IRF+D TS +T IK E+L + L YSAII+DEAHER+++TDVL GLL++V
Sbjct: 614 IRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVV 673
Query: 174 NARS 177
RS
Sbjct: 674 ARRS 677
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 734 (263.4 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
Identities = 160/349 (45%), Positives = 234/349 (67%)
Query: 193 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 246
S +I+D ++ +NT LK+ R+ LKLI+ SA+++A FS +FG A +
Sbjct: 303 SCIIMDEAHE-RALNTDVLMGLLKKILARR-RDLKLIVTSATMNAERFSRFFGGAPEFII 360
Query: 247 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 306
GR FPV++ ++ P DY+D+ + + +H+ + PGDILVF+TGQE+IE+ LV ERL
Sbjct: 361 PGRTFPVDVHFSRTPCEDYVDSAVKQVLAIHVSQGPGDILVFMTGQEDIEATCELVDERL 420
Query: 307 LQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 366
L + KL +PI+S +P+EQQ ++F AA G RKVI+ATNIAETS+T+ GI +V+D
Sbjct: 421 KLLNDPP-KLSILPIYSQMPAEQQAKIFERAAPGVRKVIVATNIAETSLTVDGIMFVVDS 479
Query: 367 GFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTK 425
G+ K ++Y+P GM++L + PIS+A A QRSGRAGR GPGK +RLY E + +++ T
Sbjct: 480 GYSKLKVYNPKMGMDTLQITPISQANANQRSGRAGRTGPGKAYRLYTEVAYKNEMYLQTI 539
Query: 426 PEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPV 485
PEI+R +LSN +L LK+LGV D++ FDFM+ P + +I SL +L+ LGAL + L+ +
Sbjct: 540 PEIQRTSLSNTVLLLKSLGVKDLLDFDFMDPPPQETISTSLFELWSLGALDNLGDLTH-L 598
Query: 486 GHQMARLPLDPIYSKALIVAG-QFNCLEEMLITVAMLSVESIFFRSPGE 533
G QM P+DP +K +I A Q+ C EEML V+MLSV ++F+R P E
Sbjct: 599 GRQMTPFPMDPPLAKLIITAAEQYGCSEEMLTIVSMLSVPNVFYR-PKE 646
Score = 324 (119.1 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
Identities = 70/155 (45%), Positives = 99/155 (63%)
Query: 27 SSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRD 86
S S+ + + +QR+ LP +V + L+ +R N ++++VGETGSGKTTQL QFL+ G+ +
Sbjct: 174 SFSKSKTLREQREFLPAFAVREDLLRVIRDNQVVVVVGETGSGKTTQLTQFLYEDGYAKF 233
Query: 87 GKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------E 137
G +IG TQP EE V+LG VGY+IRF+D T +T IK E
Sbjct: 234 G-MIGCTQPRRVAAMSVAKRVSEEMEVDLGDLVGYAIRFEDCTGPNTAIKYMTDGVLLRE 292
Query: 138 ALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
+L+ L +YS II+DEAHER ++TDVL+GLLKK+
Sbjct: 293 SLVQTDLDKYSCIIMDEAHERALNTDVLMGLLKKI 327
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 769 (275.8 bits), Expect = 1.5e-104, Sum P(2) = 1.5e-104
Identities = 165/330 (50%), Positives = 223/330 (67%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
R+ + LKL++MSA+LDA F +YF A + V GR PVEI YT PE DYL+A + T+
Sbjct: 214 RQRSDLKLVVMSATLDAGKFQQYFDNAPLMKVPGRTHPVEIFYTPEPERDYLEAAIRTVI 273
Query: 275 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRV 333
Q+H+ +E GDIL+FLTGQEEIE + ++ + L +L +P++S+LP Q R+
Sbjct: 274 QIHMCEEIEGDILMFLTGQEEIEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRI 333
Query: 334 FAPA----AAGF--RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVP 387
F PA A G RKV+++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV P
Sbjct: 334 FEPAPPPNANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSP 393
Query: 388 ISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVD 446
ISKA A QRSGRAGR PGKCFRLY E F ++++D+T PEI R NL V+LQLK LG+D
Sbjct: 394 ISKASAQQRSGRAGRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGID 453
Query: 447 DIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAG 506
D++ FDFM+ P+ +++++LE L L AL DD L+D +G M+ PLDP +K LI +
Sbjct: 454 DLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTD-LGAVMSEFPLDPQLAKMLIASC 512
Query: 507 QFNCLEEMLITVAMLSVESIFFRSPGEVRR 536
Q NC E+L AMLSV F R P E ++
Sbjct: 513 QHNCSNEILSITAMLSVPQCFVR-PNEAKK 541
Score = 286 (105.7 bits), Expect = 1.5e-104, Sum P(2) = 1.5e-104
Identities = 66/174 (37%), Positives = 99/174 (56%)
Query: 13 THNPKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTT 72
T NP L + P+ S R Q + ++R +LP+ + + + + +++VGETGSGKTT
Sbjct: 49 TMNP-LTNTPY----SQRYQNLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTT 103
Query: 73 QLPQFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTS 132
Q+PQ+ + K + TQP EE V+LG+ VGYSIRF+D ++
Sbjct: 104 QIPQWCVDFAVSKGRKGVSCTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAK 163
Query: 133 TRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
T +K EA+ DP L +Y I++DEAHERT+ TD+L+G+LK+V RS
Sbjct: 164 TLLKYMTDGMLLREAMSDPMLDQYQVILLDEAHERTLATDILMGVLKEVIRQRS 217
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 751 (269.4 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 160/325 (49%), Positives = 219/325 (67%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LK+I+MSA+LDA+ F +YF A + V GR +PVEI YT PE DYL+A L T+ Q+H++
Sbjct: 223 LKIIVMSATLDAKKFQKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHVE 282
Query: 280 EAPGDILVFLTGQEEIESVERLVQERLLQLPE--ASRKLVTVPIFSSLPSEQQMRVFAPA 337
E PGDILVFLTG+EEIE R + L A+ L P++ SLP QQ R+F P
Sbjct: 283 EGPGDILVFLTGEEEIEDACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPT 342
Query: 338 A----AGF-RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQ 392
+G+ RKV+++TNIAETS+TI GI YV+DPGF K ++Y+P +ESLLV PISKA
Sbjct: 343 PEDTKSGYGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKAS 402
Query: 393 ALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGVDDIIGF 451
A QR+GRAGR PGKCFRLY E F K L + T PEI R NLS+ +L+LK LG+DD++ F
Sbjct: 403 AQQRAGRAGRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHF 462
Query: 452 DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCL 511
D+M+ P+ +++++LE+L L L D+ L+ P+G + + PLDP + LI + +F C
Sbjct: 463 DYMDPPAPETMMRALEELNYLNCLDDNGDLT-PLGRKASEFPLDPNLAVMLIRSPEFYCS 521
Query: 512 EEMLITVAMLSVESIFFRSPGEVRR 536
E+L A+LSV ++F R P R+
Sbjct: 522 NEVLSLTALLSVPNVFVR-PNSARK 545
Score = 302 (111.4 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 68/166 (40%), Positives = 96/166 (57%)
Query: 23 FFNDS--SSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH 80
FFND S KIL+ R+ LP+ + ++ +N I++ VGETGSGKTTQ+PQF+ +
Sbjct: 55 FFNDKPFSQNYFKILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLY 114
Query: 81 AGFCR-DGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK--- 136
I TQP +E V+LG+ VGY+IRF+D + +T +K
Sbjct: 115 DELPHLTNTQIACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMT 174
Query: 137 ------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
EA+ D LSRYS II+DEAHERT+ TD+L+GL+K++ R
Sbjct: 175 DGMLLREAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRR 220
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 722 (259.2 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 148/315 (46%), Positives = 217/315 (68%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LKLI+ SA+++A+ FS++FG A + GR FPV+++++ P DY+D + + +H+
Sbjct: 449 LKLIVTSATMNAKRFSDFFGGAPDFTIPGRTFPVDVMFSRSPVEDYVDQAVQQVLNIHVS 508
Query: 280 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 339
GDILVF+TGQE+IE LV+ERL L + KL +PI+S +P++ Q ++F A
Sbjct: 509 MGTGDILVFMTGQEDIEVTCELVRERLDALNDPP-KLSILPIYSQMPADLQAKIFDRAPP 567
Query: 340 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGR 399
G RK I+ATNIAETS+T+ GI YV+D G+ K ++Y+P GM++L + PIS+A A QRSGR
Sbjct: 568 GVRKCIVATNIAETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQANASQRSGR 627
Query: 400 AGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPS 458
AGR GPGK FRL+ E F D+L T PEI+R NLSN IL +K+LGV D++ FDFM+ P
Sbjct: 628 AGRTGPGKAFRLFTEKAFKDELYIQTIPEIQRTNLSNTILLIKSLGVKDMLDFDFMDPPP 687
Query: 459 RASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITV 518
+ ++ SL L+ LGAL + ++D +G +M P+DP +K +I+A ++ C EEM+ V
Sbjct: 688 QDTMTTSLFDLWALGALDNLGDMTD-LGRKMNFFPMDPPLAKLIIMAEEYGCTEEMITIV 746
Query: 519 AMLSVESIFFRSPGE 533
+MLSV ++F+R P E
Sbjct: 747 SMLSVPNVFYR-PKE 760
Score = 331 (121.6 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 81/184 (44%), Positives = 109/184 (59%)
Query: 5 AEGEVSNSTHNPKLHSKPFFNDSSS---RRQKILQQRKSLPIASVEKRLVEEVRKNDILI 61
AE + S + H K ND +S + + I +QR+ LP +V + L+ +R N ++I
Sbjct: 266 AEVKAEKSDNKFSEHMKK--NDGASNFSQTKSIREQREFLPAFAVREDLMRVIRDNQVII 323
Query: 62 IVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGY 121
+VGETGSGKTTQL QFL+ G+ + G +IG TQP EE V+LG VGY
Sbjct: 324 VVGETGSGKTTQLTQFLYEDGYGQLG-MIGCTQPRRVAAMSVAKRVSEEMEVKLGGTVGY 382
Query: 122 SIRFDDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
+IRF+D TS T IK E+L +P L RYS II+DEAHER ++TDVL+GL KK+
Sbjct: 383 AIRFEDCTSKDTVIKYMTDGVLLRESLNEPDLDRYSCIIMDEAHERALNTDVLMGLFKKI 442
Query: 173 QNAR 176
R
Sbjct: 443 LQRR 446
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 722 (259.2 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 153/315 (48%), Positives = 211/315 (66%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LKL+I SA+++A+ FSE+F +V GR++PV+I YTL PE +Y+ A + TIFQ+H
Sbjct: 372 LKLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTT 431
Query: 280 EA-PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAA 338
++ PGDILVFLTGQEEIE + ++E + +L +++++ PI+++LP EQQ+++F P
Sbjct: 432 QSLPGDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTP 491
Query: 339 AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSG 398
RKV+LATNIAETS+TI GI+YVIDPGFVK Y P GM LL VP S+A QR+G
Sbjct: 492 ENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAG 551
Query: 399 RAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 457
RAGR GPGKCFR++ + + +LE KPEI R NLSN +L L +LGV D+I F M+KP
Sbjct: 552 RAGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKP 611
Query: 458 SRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFN-C---LEE 513
S ++ KSLE L++LGAL ++ +G M P +P ++K L A C LEE
Sbjct: 612 SIPTLRKSLENLYILGALNSKGTITR-LGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEE 670
Query: 514 MLITVAML-SVESIF 527
L V+ML S+F
Sbjct: 671 CLTIVSMLHETPSLF 685
Score = 331 (121.6 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 70/159 (44%), Positives = 100/159 (62%)
Query: 26 DSSSRRQKILQQ-RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFC 84
++ +R +Q+ RK LP+ + L++E++KN +LII+GETGSGKTTQLPQ+L GF
Sbjct: 207 ETEEKRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFT 266
Query: 85 RDGKL-IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI-------- 135
GKL I +TQP +E V LG+ VGY IRF+D+T+ + +
Sbjct: 267 DQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGM 326
Query: 136 --KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
+E L D LS+YS I++DEAHERT+ TD+L+GLLK +
Sbjct: 327 LLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDI 365
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 699 (251.1 bits), Expect = 4.0e-104, Sum P(2) = 4.0e-104
Identities = 165/342 (48%), Positives = 218/342 (63%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LKLI+MSA+L+A F +YF A + V GR PVEI YT DYL++ + T+ +H +
Sbjct: 224 LKLIVMSATLEAGKFQKYFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTN 283
Query: 280 EAPGDILVFLTGQEEIES----VERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFA 335
E GDILVFLTG+EEIE ++R +ER LP + T+P++SSLP QQ ++F
Sbjct: 284 EGTGDILVFLTGEEEIEDTCAKIQRETRER--GLPP----MKTLPLYSSLPIYQQSKIFD 337
Query: 336 PAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQ 395
RK I++TNIAETS+TI GI +V+DPGF K + Y+P +ESLLV PISKA A Q
Sbjct: 338 TCKE--RKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQ 395
Query: 396 RSGRAGREGPGKCFRLYPENEFDKLE-DSTKPEIKRCNLSNVILQLKALGVDDIIGFDFM 454
R+GRAGR PGKCFRLY E F +L T PEI R NL++V+LQL LGV D++ FDFM
Sbjct: 396 RAGRAGRTRPGKCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFM 455
Query: 455 EKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEM 514
+ P ++I++LE L LGAL D+ +L++ +G M+ PLDP SK LIV+ + +C E+
Sbjct: 456 DPPVPDTLIRALEVLHYLGALDDEGQLTE-IGSIMSEFPLDPQLSKMLIVSAERSCSNEI 514
Query: 515 LITVAMLSVESIFFRSPGEVRRGKKCNEIFCKSRWRS-PHFD 555
L AMLS + F R P K N I S +S HFD
Sbjct: 515 LTIAAMLSAPNCFMR-P-------KDNRIEADSAKKSFDHFD 548
Score = 352 (129.0 bits), Expect = 4.0e-104, Sum P(2) = 4.0e-104
Identities = 75/176 (42%), Positives = 109/176 (61%)
Query: 10 SNSTHNPKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSG 69
SN T + + K F S R +IL++RK LP+ ++ ++ +++N ++I+VGETGSG
Sbjct: 49 SNLTIDQWIPKKETF---SKRYYEILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSG 105
Query: 70 KTTQLPQFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT 129
KTTQ+PQF+ AG R GK++GVTQP EE ELG+ VGYSIRF++ +
Sbjct: 106 KTTQIPQFVVDAGLIRPGKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELS 165
Query: 130 STSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
S T +K E++ DP L++Y II+DEAHERT+ TD+L GL+K + R
Sbjct: 166 SARTFMKYLTDGMLLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRR 221
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 745 (267.3 bits), Expect = 7.4e-103, Sum P(2) = 7.4e-103
Identities = 162/344 (47%), Positives = 221/344 (64%)
Query: 209 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDA 268
LKQ R+ LK+IIMSA+LDA F YF A + V GR +PVE+ YT + DYLD+
Sbjct: 231 LKQVVKRR-PDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDS 289
Query: 269 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQL--PEASRKLVTVPIFSSLP 326
+ T+ Q+H E GDIL+FLTG++EIE R + QL E L P++ SLP
Sbjct: 290 AIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLP 349
Query: 327 SEQQMRVFAPAAAGF-----RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGME 381
QQ R+F PA RKV+++TNIAETS+TI GI YV+DPGF K ++Y+P +E
Sbjct: 350 PHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVE 409
Query: 382 SLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQL 440
SLLV PISKA A QR+GRAGR PGKCFRLY E F K L + + PEI R NLS+ +L+L
Sbjct: 410 SLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLEL 469
Query: 441 KALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSK 500
K LG+DD++ FDFM+ P+ +++++LE+L L L D+ L+ P+G ++ PLDP+ +
Sbjct: 470 KKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLDDEGNLT-PLGRLASQFPLDPMLAV 528
Query: 501 ALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIF 544
LI + +F C +E+L VAMLSV ++F R + +R IF
Sbjct: 529 MLIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDKKRADDAKNIF 572
Score = 294 (108.6 bits), Expect = 7.4e-103, Sum P(2) = 7.4e-103
Identities = 68/153 (44%), Positives = 92/153 (60%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQF-LFHAGFCRDGKLIGV 92
IL+ R+ LP+ + ++ + N I++ VGETGSGKTTQ+PQF LF + +
Sbjct: 86 ILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVAC 145
Query: 93 TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPY 143
TQP EE V+LG+ VGYSIRF+++TS T +K EA+ D
Sbjct: 146 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD 205
Query: 144 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
LSRYS II+DEAHERT+ TD+L+GLLK+V R
Sbjct: 206 LSRYSCIILDEAHERTLATDILMGLLKQVVKRR 238
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 731 (262.4 bits), Expect = 7.4e-103, Sum P(2) = 7.4e-103
Identities = 166/346 (47%), Positives = 223/346 (64%)
Query: 209 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDA 268
LKQ R+ + LK+IIMSA+LDA F YF A + V GR PVEI YT E DY++A
Sbjct: 245 LKQLSLRR-SDLKIIIMSATLDAAKFQRYFFEAPILAVPGRTHPVEIFYTAEAERDYIEA 303
Query: 269 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTV-PIFSSLP 326
++ T+ Q+H EA GDIL+FLTG+EEIE V R V+ + +L +A + V P++ +LP
Sbjct: 304 SVRTVLQIHATEAEGDILLFLTGEEEIEDVCRKVRLEVDELIRDADCGPMEVYPLYGTLP 363
Query: 327 SEQQMRVF----APAAAGFR---KVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 379
+QQ ++F P G R K I+ATNIAETS+TI GI YV+DPGF K ++Y+
Sbjct: 364 PQQQQKIFNAAPPPLKKGGRPGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIR 423
Query: 380 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVIL 438
+ESLLV PIS+A A QR+GRAGR PGKCFRLY E F K L + T PEI R NLSN IL
Sbjct: 424 VESLLVTPISRASAQQRAGRAGRTRPGKCFRLYTEAAFKKELIEQTYPEILRSNLSNTIL 483
Query: 439 QLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIY 498
+LK LGVDD++ FDFM+ P+ +++++LE+L L L DD L+D +GH + PLDP
Sbjct: 484 ELKKLGVDDLVHFDFMDPPAPETMMRALEELNYLSCLNDDGDLTD-LGHMASEYPLDPAL 542
Query: 499 SKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIF 544
+ L+ + +F C EML ++LSV +F R +R + E F
Sbjct: 543 AVMLVSSPEFYCSNEMLSVTSLLSVPQVFMRPANNRKRADEMKEHF 588
Score = 308 (113.5 bits), Expect = 7.4e-103, Sum P(2) = 7.4e-103
Identities = 68/166 (40%), Positives = 100/166 (60%)
Query: 24 FNDSSSRRQ--KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHA 81
F S +Q KIL+ R++LP+ + ++ K I++ VGETGSGKTTQ+PQ++ +
Sbjct: 88 FTGGSHSQQYFKILKTRRNLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQIPQYVLYD 147
Query: 82 GFCR-DGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---- 136
+ K++ TQP +E VELGQ VGYSIRF+++T+ ST +K
Sbjct: 148 ELPHLNKKMVACTQPRRVAAMSVAQRVADELDVELGQEVGYSIRFENKTTPSTILKYMTD 207
Query: 137 -----EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
E + DP ++RYS II+DEAHERT+ TD+L+ LLK++ RS
Sbjct: 208 GQLLRETIHDPNMTRYSCIIIDEAHERTLATDILMALLKQLSLRRS 253
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 731 (262.4 bits), Expect = 1.5e-102, Sum P(2) = 1.5e-102
Identities = 167/368 (45%), Positives = 230/368 (62%)
Query: 193 SDMILDRGND----TNGI-NTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQ 247
S +ILD ++ T+ + LK+ R+ LK+IIMSA+LDA+ F YF A + V
Sbjct: 216 STIILDEAHERTMSTDVLMGLLKEVVQRR-PDLKIIIMSATLDAQKFQRYFNDAPLLAVP 274
Query: 248 GRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQ---E 304
GR PVEI YT PE DY++A + T+ Q+H E GDIL+FLTG+EEIE R + +
Sbjct: 275 GRTHPVEIFYTPEPEQDYVEAAIRTVLQIHATEDEGDILLFLTGEEEIEDAARKISLEGD 334
Query: 305 RLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAA-----AGF--RKVILATNIAETSVTI 357
+++ +A L ++ SLP Q R+F PA G RKVI++TNIAETS+TI
Sbjct: 335 EMIREADAG-PLKVYTLYGSLPPHMQQRIFEPAPPPRRPGGRPGRKVIVSTNIAETSLTI 393
Query: 358 PGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF 417
GI YV+DPGF K ++Y+P +ESLLV PISKA A QR+GRAGR PGKCFRLY E+ F
Sbjct: 394 DGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTESAF 453
Query: 418 DK-LEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALT 476
K L D T PEI R NLS+ +L+LK LG+DD++ FD M+ P+ +++++LE+L L L
Sbjct: 454 KKELIDQTYPEILRSNLSSTVLELKKLGIDDLVHFDLMDPPAPETLMRALEELNYLACLD 513
Query: 477 DDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRR 536
DD L+ P+G + PLDP + LI + +F C E+L A+LSV IF R + +R
Sbjct: 514 DDGNLT-PLGRLASEFPLDPALAVMLISSPEFYCSNEILSITALLSVPQIFVRPASQRKR 572
Query: 537 GKKCNEIF 544
+ +F
Sbjct: 573 ADEMKNLF 580
Score = 305 (112.4 bits), Expect = 1.5e-102, Sum P(2) = 1.5e-102
Identities = 74/166 (44%), Positives = 97/166 (58%)
Query: 22 PFFNDS-SSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH 80
PF N SS+ IL+ R+ LP+ + ++ +++ IL+ VGETGSGKTTQ+PQF+
Sbjct: 79 PFTNRPYSSKYFSILKTRRDLPVHAQRDEFLQLYQQSQILVFVGETGSGKTTQIPQFVLL 138
Query: 81 AGFCR-DGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK--- 136
+ K+I TQP E V LG+ VGYSIRF+D TS T +K
Sbjct: 139 DDLPQTQRKMIACTQPRRVAAMSVAQRVAAELDVTLGEEVGYSIRFEDMTSPKTLLKYMT 198
Query: 137 ------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
EA+ D LSRYS II+DEAHERT+ TDVL+GLLK+V R
Sbjct: 199 DGMLLREAMNDHELSRYSTIILDEAHERTMSTDVLMGLLKEVVQRR 244
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 739 (265.2 bits), Expect = 1.4e-101, Sum P(2) = 1.4e-101
Identities = 162/350 (46%), Positives = 227/350 (64%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
R+ + LK+I+MSA+LDA F YF + + GR PVEI YT PE DYL+A + T+
Sbjct: 255 RQRSDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 314
Query: 275 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRV 333
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L + +P++S+LP +QQ R+
Sbjct: 315 QIHMCEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIPLYSTLPPQQQQRI 374
Query: 334 FAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 386
F P A G RKV+++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV
Sbjct: 375 FEPPPPRKPNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVT 433
Query: 387 PISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGV 445
ISKA A QR+GRAGR PGKCFRLY E + +++D+T PEI R NL +V+LQLK LG+
Sbjct: 434 AISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGI 493
Query: 446 DDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVA 505
DD++ FDFM+ P+ +++++LE L L AL DD L++ +G MA PLDP +K +I +
Sbjct: 494 DDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIAS 552
Query: 506 GQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIFCKSRWRSPHFD 555
FNC E+L AMLSV F R P E + K +E S+ R H D
Sbjct: 553 CDFNCSNEVLSITAMLSVPQCFVR-PTEAK--KAADE----SKMRFAHID 595
Score = 288 (106.4 bits), Expect = 1.4e-101, Sum P(2) = 1.4e-101
Identities = 70/168 (41%), Positives = 96/168 (57%)
Query: 22 PFFN-DSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH 80
PF N + R +IL++R LP+ ++R + + ++ ++VGETGSGKTTQ+PQ+
Sbjct: 91 PFTNLPHTPRYYEILKKRLQLPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVD 150
Query: 81 AGFCRDGKLIGV--TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK-- 136
G GV TQP +E V LGQ VGYSIRF+D +S T +K
Sbjct: 151 MVRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYM 210
Query: 137 -------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
EA+ DP L RY II+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 211 TDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS 258
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 738 (264.8 bits), Expect = 3.6e-101, Sum P(2) = 3.6e-101
Identities = 158/332 (47%), Positives = 222/332 (66%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
R+ A LK+I+MSA+LDA F YF + + GR PVEI YT PE DYL+A + T+
Sbjct: 248 RQRADLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 307
Query: 275 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTVPIFSSLPSEQQMR 332
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L PE + +P++S+LP +QQ R
Sbjct: 308 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVG-DIKIIPLYSTLPPQQQQR 366
Query: 333 VFAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLV 385
+F P A G RKV+++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV
Sbjct: 367 IFEPPPPKKQNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 425
Query: 386 VPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALG 444
ISKA A QR+GRAGR PGKCFRLY E + +++D+T PEI R NL +V+LQLK LG
Sbjct: 426 TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG 485
Query: 445 VDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIV 504
+DD++ FDFM+ P+ +++++LE L L AL DD L++ +G MA PLDP +K +I
Sbjct: 486 IDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIA 544
Query: 505 AGQFNCLEEMLITVAMLSVESIFFRSPGEVRR 536
+ +NC E+L AMLSV F R P E ++
Sbjct: 545 SCDYNCSNEVLSITAMLSVPQCFVR-PTEAKK 575
Score = 285 (105.4 bits), Expect = 3.6e-101, Sum P(2) = 3.6e-101
Identities = 71/172 (41%), Positives = 97/172 (56%)
Query: 19 HS-KPFFN-DSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQ 76
HS PF N + R IL++R LP+ ++R + + ++ ++VGETGSGKTTQ+PQ
Sbjct: 80 HSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQIPQ 139
Query: 77 FLFHAGFCRDGKLIGV--TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTR 134
+ G GV TQP +E V LGQ VGYSIRF+D +S T
Sbjct: 140 WCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTI 199
Query: 135 IK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
+K EA+ DP L RY II+DEAHERT+ TD+L+G+LK+V R+
Sbjct: 200 LKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRA 251
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 693 (249.0 bits), Expect = 9.1e-101, Sum P(3) = 9.1e-101
Identities = 146/326 (44%), Positives = 210/326 (64%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYF---GCAKA---VHVQGRQFPVEILYTLYPEPDYLDA 268
RK + LKLII SA++DA FSE+F G + + ++GR PV Y P DY+
Sbjct: 188 RKRSSLKLIISSATIDASFFSEFFSWPGSGEVSVKLSIEGRMHPVSNFYLNEPCADYVKE 247
Query: 269 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 328
T+ T++++H E PGDIL FLTGQEE+ L++E + + + K++ P++ S+ S
Sbjct: 248 TVETVWKLHQKEPPGDILAFLTGQEEVLEALDLLREYIASSEQENLKVL--PMYGSMSST 305
Query: 329 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 388
Q+ VF G RKV+LATNIAETS+TIPGI YVID G+VK + Y+P +SL++VP+
Sbjct: 306 DQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPV 365
Query: 389 SKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 448
SKA A+QR+GRAGR PGK +RLY +++++ L PE++R LS ILQLKALG+ +I
Sbjct: 366 SKASAIQRAGRAGRMRPGKVYRLYTKSDYEALAPRQPPEMRRSELSGAILQLKALGIGNI 425
Query: 449 IGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQF 508
+ FDF P +++ +LE LF L A+ + L+ PVG+ +A LP + SK L V+GQ
Sbjct: 426 LRFDFPSPPPAQNLLSALESLFALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQM 485
Query: 509 NCLEEMLITVAMLSVESIFFRSPGEV 534
C EE++ +A+L V+SIF R V
Sbjct: 486 GCSEEIITIIALLQVQSIFSRPASAV 511
Score = 297 (109.6 bits), Expect = 9.1e-101, Sum P(3) = 9.1e-101
Identities = 64/153 (41%), Positives = 95/153 (62%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
+++QR+ LPI +++ + K+ ++I+VGETGSGK+TQ+PQ+L+ G+ G LIG+T
Sbjct: 40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKG-LIGIT 98
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 144
+P +E G +G VGY +RF + S+ T+IK E L DP L
Sbjct: 99 EPRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPLL 158
Query: 145 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
++Y IIVDEAHER + TD++LGLLKK+ RS
Sbjct: 159 TQYGVIIVDEAHERNMLTDMILGLLKKILRKRS 191
Score = 43 (20.2 bits), Expect = 9.1e-101, Sum P(3) = 9.1e-101
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 511 LEEMLITVAMLSVESIFFRSPGEVRRGKKC 540
L E LITVA F G+V + KC
Sbjct: 566 LREQLITVARKKYGIPIFSCKGDVEKLCKC 595
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 734 (263.4 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 157/332 (47%), Positives = 222/332 (66%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
R+ + LK+I+MSA+LDA F YF + + GR PVEI YT PE DYL+A + T+
Sbjct: 281 RQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 340
Query: 275 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTVPIFSSLPSEQQMR 332
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L PE + +P++S+LP +QQ R
Sbjct: 341 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVG-DIKIIPLYSTLPPQQQQR 399
Query: 333 VFAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLV 385
+F P A G RKV+++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV
Sbjct: 400 IFEPPPPKKQNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 386 VPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALG 444
ISKA A QR+GRAGR PGKCFRLY E + +++D+T PEI R NL +V+LQLK LG
Sbjct: 459 TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG 518
Query: 445 VDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIV 504
+DD++ FDFM+ P+ +++++LE L L AL DD L++ +G MA PLDP +K +I
Sbjct: 519 IDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIA 577
Query: 505 AGQFNCLEEMLITVAMLSVESIFFRSPGEVRR 536
+ +NC E+L AMLSV F R P E ++
Sbjct: 578 SCDYNCSNEVLSITAMLSVPQCFVR-PTEAKK 608
Score = 284 (105.0 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 70/168 (41%), Positives = 94/168 (55%)
Query: 22 PFFN-DSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH 80
PF N + R IL++R LP+ + R + + ++ ++VGETGSGKTTQ+PQ+
Sbjct: 117 PFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVE 176
Query: 81 AGFCRDGKLIGV--TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK-- 136
G GV TQP +E V LGQ VGYSIRF+D +S T +K
Sbjct: 177 YMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYM 236
Query: 137 -------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
EA+ DP L RY II+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 237 TDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS 284
Score = 37 (18.1 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 128 RTSTSTRIKEALLDPYLSRYSAIIVDEAHE-RTVHT 162
R ST+ + A L P + +SA AH + H+
Sbjct: 62 RASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHS 97
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 734 (263.4 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 157/332 (47%), Positives = 222/332 (66%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
R+ + LK+I+MSA+LDA F YF + + GR PVEI YT PE DYL+A + T+
Sbjct: 281 RQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 340
Query: 275 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTVPIFSSLPSEQQMR 332
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L PE + +P++S+LP +QQ R
Sbjct: 341 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVG-DIKIIPLYSTLPPQQQQR 399
Query: 333 VFAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLV 385
+F P A G RKV+++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV
Sbjct: 400 IFEPPPPKKQNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 386 VPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALG 444
ISKA A QR+GRAGR PGKCFRLY E + +++D+T PEI R NL +V+LQLK LG
Sbjct: 459 TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG 518
Query: 445 VDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIV 504
+DD++ FDFM+ P+ +++++LE L L AL DD L++ +G MA PLDP +K +I
Sbjct: 519 IDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIA 577
Query: 505 AGQFNCLEEMLITVAMLSVESIFFRSPGEVRR 536
+ +NC E+L AMLSV F R P E ++
Sbjct: 578 SCDYNCSNEVLSITAMLSVPQCFVR-PTEAKK 608
Score = 284 (105.0 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 70/168 (41%), Positives = 94/168 (55%)
Query: 22 PFFN-DSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH 80
PF N + R IL++R LP+ + R + + ++ ++VGETGSGKTTQ+PQ+
Sbjct: 117 PFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVE 176
Query: 81 AGFCRDGKLIGV--TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK-- 136
G GV TQP +E V LGQ VGYSIRF+D +S T +K
Sbjct: 177 YMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYM 236
Query: 137 -------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
EA+ DP L RY II+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 237 TDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS 284
Score = 37 (18.1 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 128 RTSTSTRIKEALLDPYLSRYSAIIVDEAHE-RTVHT 162
R ST+ + A L P + +SA AH + H+
Sbjct: 62 RASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHS 97
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 734 (263.4 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 157/332 (47%), Positives = 222/332 (66%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
R+ + LK+I+MSA+LDA F YF + + GR PVEI YT PE DYL+A + T+
Sbjct: 281 RQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 340
Query: 275 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTVPIFSSLPSEQQMR 332
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L PE + +P++S+LP +QQ R
Sbjct: 341 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVG-DIKIIPLYSTLPPQQQQR 399
Query: 333 VFAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLV 385
+F P A G RKV+++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV
Sbjct: 400 IFEPPPPKKQNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 386 VPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALG 444
ISKA A QR+GRAGR PGKCFRLY E + +++D+T PEI R NL +V+LQLK LG
Sbjct: 459 TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG 518
Query: 445 VDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIV 504
+DD++ FDFM+ P+ +++++LE L L AL DD L++ +G MA PLDP +K +I
Sbjct: 519 IDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIA 577
Query: 505 AGQFNCLEEMLITVAMLSVESIFFRSPGEVRR 536
+ +NC E+L AMLSV F R P E ++
Sbjct: 578 SCDYNCSNEVLSITAMLSVPQCFVR-PTEAKK 608
Score = 284 (105.0 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 70/168 (41%), Positives = 94/168 (55%)
Query: 22 PFFN-DSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH 80
PF N + R IL++R LP+ + R + + ++ ++VGETGSGKTTQ+PQ+
Sbjct: 117 PFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVE 176
Query: 81 AGFCRDGKLIGV--TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK-- 136
G GV TQP +E V LGQ VGYSIRF+D +S T +K
Sbjct: 177 YMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYM 236
Query: 137 -------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
EA+ DP L RY II+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 237 TDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS 284
Score = 37 (18.1 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 128 RTSTSTRIKEALLDPYLSRYSAIIVDEAHE-RTVHT 162
R ST+ + A L P + +SA AH + H+
Sbjct: 62 RASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHS 97
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 734 (263.4 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 157/332 (47%), Positives = 222/332 (66%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
R+ + LK+I+MSA+LDA F YF + + GR PVEI YT PE DYL+A + T+
Sbjct: 281 RQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 340
Query: 275 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTVPIFSSLPSEQQMR 332
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L PE + +P++S+LP +QQ R
Sbjct: 341 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVG-DIKIIPLYSTLPPQQQQR 399
Query: 333 VFAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLV 385
+F P A G RKV+++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV
Sbjct: 400 IFEPPPPKKQNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 386 VPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALG 444
ISKA A QR+GRAGR PGKCFRLY E + +++D+T PEI R NL +V+LQLK LG
Sbjct: 459 TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG 518
Query: 445 VDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIV 504
+DD++ FDFM+ P+ +++++LE L L AL DD L++ +G MA PLDP +K +I
Sbjct: 519 IDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIA 577
Query: 505 AGQFNCLEEMLITVAMLSVESIFFRSPGEVRR 536
+ +NC E+L AMLSV F R P E ++
Sbjct: 578 SCDYNCSNEVLSITAMLSVPQCFVR-PTEAKK 608
Score = 284 (105.0 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 70/168 (41%), Positives = 94/168 (55%)
Query: 22 PFFN-DSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH 80
PF N + R IL++R LP+ + R + + ++ ++VGETGSGKTTQ+PQ+
Sbjct: 117 PFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVE 176
Query: 81 AGFCRDGKLIGV--TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK-- 136
G GV TQP +E V LGQ VGYSIRF+D +S T +K
Sbjct: 177 YMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYM 236
Query: 137 -------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
EA+ DP L RY II+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 237 TDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS 284
Score = 37 (18.1 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 128 RTSTSTRIKEALLDPYLSRYSAIIVDEAHE-RTVHT 162
R ST+ + A L P + +SA AH + H+
Sbjct: 62 RASTNAMLISAGLPPLKASHSAHSTHSAHSAHSTHS 97
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 734 (263.4 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 157/332 (47%), Positives = 222/332 (66%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
R+ + LK+I+MSA+LDA F YF + + GR PVEI YT PE DYL+A + T+
Sbjct: 281 RQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 340
Query: 275 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTVPIFSSLPSEQQMR 332
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L PE + +P++S+LP +QQ R
Sbjct: 341 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVG-DIKIIPLYSTLPPQQQQR 399
Query: 333 VFAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLV 385
+F P A G RKV+++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV
Sbjct: 400 IFEPPPPKKQNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 386 VPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALG 444
ISKA A QR+GRAGR PGKCFRLY E + +++D+T PEI R NL +V+LQLK LG
Sbjct: 459 TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG 518
Query: 445 VDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIV 504
+DD++ FDFM+ P+ +++++LE L L AL DD L++ +G MA PLDP +K +I
Sbjct: 519 IDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIA 577
Query: 505 AGQFNCLEEMLITVAMLSVESIFFRSPGEVRR 536
+ +NC E+L AMLSV F R P E ++
Sbjct: 578 SCDYNCSNEVLSITAMLSVPQCFVR-PTEAKK 608
Score = 284 (105.0 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 70/168 (41%), Positives = 94/168 (55%)
Query: 22 PFFN-DSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH 80
PF N + R IL++R LP+ + R + + ++ ++VGETGSGKTTQ+PQ+
Sbjct: 117 PFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVE 176
Query: 81 AGFCRDGKLIGV--TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK-- 136
G GV TQP +E V LGQ VGYSIRF+D +S T +K
Sbjct: 177 YMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYM 236
Query: 137 -------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
EA+ DP L RY II+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 237 TDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS 284
Score = 37 (18.1 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 128 RTSTSTRIKEALLDPYLSRYSAIIVDEAHE-RTVHT 162
R ST+ + A L P + +SA AH + H+
Sbjct: 62 RASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHS 97
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 734 (263.4 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 157/332 (47%), Positives = 222/332 (66%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
R+ + LK+I+MSA+LDA F YF + + GR PVEI YT PE DYL+A + T+
Sbjct: 281 RQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 340
Query: 275 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTVPIFSSLPSEQQMR 332
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L PE + +P++S+LP +QQ R
Sbjct: 341 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVG-DIKIIPLYSTLPPQQQQR 399
Query: 333 VFAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLV 385
+F P A G RKV+++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV
Sbjct: 400 IFEPPPPKKQNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 386 VPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALG 444
ISKA A QR+GRAGR PGKCFRLY E + +++D+T PEI R NL +V+LQLK LG
Sbjct: 459 TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG 518
Query: 445 VDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIV 504
+DD++ FDFM+ P+ +++++LE L L AL DD L++ +G MA PLDP +K +I
Sbjct: 519 IDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPLDPQLAKMVIA 577
Query: 505 AGQFNCLEEMLITVAMLSVESIFFRSPGEVRR 536
+ +NC E+L AMLSV F R P E ++
Sbjct: 578 SCDYNCSNEVLSITAMLSVPQCFVR-PTEAKK 608
Score = 284 (105.0 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 70/168 (41%), Positives = 94/168 (55%)
Query: 22 PFFN-DSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH 80
PF N + R IL++R LP+ + R + + ++ ++VGETGSGKTTQ+PQ+
Sbjct: 117 PFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVE 176
Query: 81 AGFCRDGKLIGV--TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK-- 136
G GV TQP +E V LGQ VGYSIRF+D +S T +K
Sbjct: 177 YMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYM 236
Query: 137 -------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
EA+ DP L RY II+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 237 TDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS 284
Score = 37 (18.1 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 128 RTSTSTRIKEALLDPYLSRYSAIIVDEAHE-RTVHT 162
R ST+ + A L P + +SA AH + H+
Sbjct: 62 RASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHS 97
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 719 (258.2 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
Identities = 161/339 (47%), Positives = 219/339 (64%)
Query: 209 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDA 268
LKQ R+ LK+IIMSA+LDA F YF A + V GR PVEI YT + DYLDA
Sbjct: 232 LKQVSVRR-PDLKIIIMSATLDAEKFQNYFNNAPLLAVPGRTHPVEIYYTPEFQRDYLDA 290
Query: 269 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQ---ERLLQLPEASRKLVTVPIFSSL 325
+ T+ Q+H E GDIL+FLTG+EEIE R + + L++ L P++ SL
Sbjct: 291 AIRTVLQIHATEGEGDILLFLTGEEEIEDACRKISLEGDELVREQNCG-PLKVYPLYGSL 349
Query: 326 PSEQQMRVFAPAAAG-------FRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVK 378
P QQ ++F PA RKVI++TNIAETS+TI GI YV+DPGF K ++Y+P
Sbjct: 350 PPHQQQKIFEPAPTNPNPNGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRV 409
Query: 379 GMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVI 437
+ESLLV PISKA A QR+GRAGR PGKCFRLY E F K L + + PEI R NLS+ +
Sbjct: 410 RVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTV 469
Query: 438 LQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPI 497
L+LK LG+DD++ FDFM+ P+ +++++LE+L L L+D+ L+ +G ++ PLDP+
Sbjct: 470 LELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLQCLSDEGDLT-ALGRLASQFPLDPM 528
Query: 498 YSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRR 536
+ LI + ++C EE+L VAMLSV ++F R P R+
Sbjct: 529 LAVMLIGSPAYSCSEEILTIVAMLSVPNVFVR-PASARK 566
Score = 289 (106.8 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
Identities = 66/166 (39%), Positives = 97/166 (58%)
Query: 22 PFF-NDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH 80
PF +D +++ IL+ R+ LP+ + + ++ I++ VGETGSGKTTQ+PQF+ +
Sbjct: 74 PFTGHDFTTKYFDILKTRRDLPVHAQREEFLKIFHSTQIMVFVGETGSGKTTQIPQFVLY 133
Query: 81 AGFCR-DGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK--- 136
GK + TQP +E VELG+ VGY+IRF++ + T +K
Sbjct: 134 DEMPHLTGKQVACTQPRRVAAMSVAARVADEMDVELGEEVGYNIRFENNSGPKTILKYMT 193
Query: 137 ------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
EA+ D L+RYS II+DEAHERT+ TD+L+GLLK+V R
Sbjct: 194 DGMLLREAMEDHDLTRYSCIILDEAHERTLATDILMGLLKQVSVRR 239
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 734 (263.4 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 156/329 (47%), Positives = 217/329 (65%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
R A +K++IMSA+LDA F YF + V GR FPVEI +T E DYL+A + T+
Sbjct: 225 RNRADIKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVI 284
Query: 275 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRV 333
Q+H+ +E GDIL+FLTGQEEIE + + + L + L +P++S+LP Q R+
Sbjct: 285 QIHMVEEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRI 344
Query: 334 FAPA------AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVP 387
F PA A RK +++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV P
Sbjct: 345 FEPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCP 404
Query: 388 ISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVD 446
ISKA A+QR+GRAGR PGKCFRLY E + +++D T PEI R NL +V+LQLK LG +
Sbjct: 405 ISKASAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTE 464
Query: 447 DIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAG 506
D++ FDFM+ P+ +++++LE L L A+ DD +L++ +G MA PLDP +K LI +
Sbjct: 465 DLVHFDFMDPPAPETLMRALELLNYLQAINDDGELTE-LGSLMAEFPLDPQLAKMLITST 523
Query: 507 QFNCLEEMLITVAMLSVESIFFRSPGEVR 535
+ NC E+L AMLSV + R P E+R
Sbjct: 524 ELNCSNEILSITAMLSVPQCWVR-PNEMR 551
Score = 272 (100.8 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 68/179 (37%), Positives = 100/179 (55%)
Query: 15 NPKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQL 74
NP +++PF S+R I ++R LP+ +++ +E +R N + +VGETGSGKTTQ+
Sbjct: 55 NP-YNNQPF----SNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQI 109
Query: 75 PQFLFH-AGFCRDG------KLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD 127
PQ+ + G +L+ TQP EE V LGQ VGYSIRF+D
Sbjct: 110 PQWAVEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFED 169
Query: 128 RTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
S T +K EA+ P L +Y +I+DEAHERT+ TD+L+GL+K++ R+
Sbjct: 170 CISERTVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRA 228
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 734 (263.4 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 156/329 (47%), Positives = 217/329 (65%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
R A +K++IMSA+LDA F YF + V GR FPVEI +T E DYL+A + T+
Sbjct: 225 RNRADIKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVI 284
Query: 275 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRV 333
Q+H+ +E GDIL+FLTGQEEIE + + + L + L +P++S+LP Q R+
Sbjct: 285 QIHMVEEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRI 344
Query: 334 FAPA------AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVP 387
F PA A RK +++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV P
Sbjct: 345 FEPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCP 404
Query: 388 ISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVD 446
ISKA A+QR+GRAGR PGKCFRLY E + +++D T PEI R NL +V+LQLK LG +
Sbjct: 405 ISKASAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTE 464
Query: 447 DIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAG 506
D++ FDFM+ P+ +++++LE L L A+ DD +L++ +G MA PLDP +K LI +
Sbjct: 465 DLVHFDFMDPPAPETLMRALELLNYLQAINDDGELTE-LGSLMAEFPLDPQLAKMLITST 523
Query: 507 QFNCLEEMLITVAMLSVESIFFRSPGEVR 535
+ NC E+L AMLSV + R P E+R
Sbjct: 524 ELNCSNEILSITAMLSVPQCWVR-PNEMR 551
Score = 272 (100.8 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 68/179 (37%), Positives = 100/179 (55%)
Query: 15 NPKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQL 74
NP +++PF S+R I ++R LP+ +++ +E +R N + +VGETGSGKTTQ+
Sbjct: 55 NP-YNNQPF----SNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQI 109
Query: 75 PQFLFH-AGFCRDG------KLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD 127
PQ+ + G +L+ TQP EE V LGQ VGYSIRF+D
Sbjct: 110 PQWAVEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFED 169
Query: 128 RTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
S T +K EA+ P L +Y +I+DEAHERT+ TD+L+GL+K++ R+
Sbjct: 170 CISERTVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRA 228
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 766 (274.7 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 157/341 (46%), Positives = 226/341 (66%)
Query: 206 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 254
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 158 IGLLKKIQ-KKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCV-ILTVEGRTFPVD 215
Query: 255 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 312
I Y P PDY+ +T+ T+ ++H E GD+L FLTGQEE+E+V ++ Q R L
Sbjct: 216 IFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGM 275
Query: 313 SRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 372
R L +P+++ LPS +QM+VF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 276 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 335
Query: 373 LYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCN 432
Y+P +E L+VVP+S+A A QR+GR GR GKC+RLY E FDKL ST PE++R N
Sbjct: 336 AYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSN 395
Query: 433 LSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARL 492
L+ VILQLKALG+D+++ F FM P S++++LE L+ LG L DC+L++P+G ++A
Sbjct: 396 LAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEF 455
Query: 493 PLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGE 533
PL+P+++K L+ +G F C +E+L AM+ +++IF P +
Sbjct: 456 PLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQ 496
Score = 237 (88.5 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 53/116 (45%), Positives = 71/116 (61%)
Query: 73 QLPQF--LFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTS 130
+LP F L AG+ +G+++GVTQP EE G LG VGY IRFDD T
Sbjct: 53 KLPVFKYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTD 112
Query: 131 T-STRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
+TRIK E ++DP L++YS I++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 113 QLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKR 168
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 696 (250.1 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 142/318 (44%), Positives = 205/318 (64%)
Query: 220 LKLIIMSASLDARGFSEYF-----G-----CAKAVHVQGRQFPVEILYTLYPEPDYLDAT 269
L++I+ SA+LDA F ++F G A + V+GR PV + +T PDY +
Sbjct: 224 LRIIVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSA 283
Query: 270 LITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQ 329
+ T+ +H E PGDILVFLTGQ+E+E V ++E L R L VP + +LP+ +
Sbjct: 284 VDTVINIHKHENPGDILVFLTGQDEVEDVCEKLRELAGNLKNCDR-LWVVPCYGALPARE 342
Query: 330 QMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPIS 389
QM+ F G RKV++ATNIAE S+TIPGI YVID G+VK R G+E+L+ V +S
Sbjct: 343 QMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVS 402
Query: 390 KAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDII 449
KA A QR+GRAGR PGKC+RLYPE+EF++ + T PEI+RC +++ ILQLKALGV ++
Sbjct: 403 KASAEQRAGRAGRIRPGKCYRLYPESEFERFAEGTVPEIQRCQMASTILQLKALGVQNVH 462
Query: 450 GFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFN 509
F ++ P ++I LE L+ LGA+ + +L+ P+G QMA PL P++SK L+ + +F
Sbjct: 463 RFHYLSPPPSWAMINGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFG 522
Query: 510 CLEEMLITVAMLSVESIF 527
C EM+ VAM+ ++ +F
Sbjct: 523 CSTEMVTIVAMMQIQDVF 540
Score = 307 (113.1 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 70/170 (41%), Positives = 97/170 (57%)
Query: 17 KLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQ 76
K+H+ P+ + I QQR LPI ++ + +IIVGETG GK+TQ+PQ
Sbjct: 59 KVHNNPYAS------LNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQ 112
Query: 77 FLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK 136
FL AG+ DG+ I +TQP EE LG VGY++RFDD + T++K
Sbjct: 113 FLLEAGWAADGRQIVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVK 172
Query: 137 ---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
E L DP LS+YS I++DEAHER+ +TD+LLGLL+K+ R+
Sbjct: 173 FMTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRN 222
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 653 (234.9 bits), Expect = 1.8e-97, Sum P(2) = 1.8e-97
Identities = 135/320 (42%), Positives = 201/320 (62%)
Query: 210 KQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDAT 269
K+ + +K A LK+++ SA++D F YF C K ++++GR +PV +++T DY+
Sbjct: 209 KERRKQKLANLKVVVTSATMDIDHFGNYFNC-KGMYLEGRTYPVRVMHTKEEHEDYIHTV 267
Query: 270 LITIFQVHLDEAPG-DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 328
L+T+F +H D+L+FLTGQEEIES+ + +++ + L +++ L
Sbjct: 268 LVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQG 327
Query: 329 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 388
+Q+ F P A RKVILATNIAETS+TIPGI+ VID GFVK + ++ V G++ L V I
Sbjct: 328 KQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRI 387
Query: 389 SKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 448
SKAQA QR+GRAGR+ G C+R Y + E D D+T+PEI R N ++++LQL AL +D
Sbjct: 388 SKAQAWQRAGRAGRDADGTCYRAYTKAEMDSFADATQPEILRTNPTSMVLQLLALDID-C 446
Query: 449 IGFDFMEKPSRASIIKSLEQLFLLGAL-TDDCKLSDPVGHQMARLPLDPIYSKALIVAGQ 507
FDF++ P + + + L LGA+ T D P+G QM + PLDP YSK L+ A
Sbjct: 447 NNFDFLDPPLEDGLRSAYKSLDALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASS 506
Query: 508 FNCLEEMLITVAMLSVESIF 527
F C+EE+L V++LS + +F
Sbjct: 507 FGCMEEILSLVSVLSSDHVF 526
Score = 335 (123.0 bits), Expect = 1.8e-97, Sum P(2) = 1.8e-97
Identities = 69/160 (43%), Positives = 103/160 (64%)
Query: 28 SSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDG 87
+S+R I QQ+KSLP+ + R+++E+ ND ++I+ ETGSGKTTQ+PQFL AG+ ++G
Sbjct: 55 TSKRTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNG 114
Query: 88 KLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EA 138
+IG+TQP +E +G VGY++RF+D TS +T+I+ E+
Sbjct: 115 -MIGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRES 173
Query: 139 LLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 178
+ D L +YS II+DEAHERTV+ D+L G++K Q R K
Sbjct: 174 IKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRK 213
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 469 (170.2 bits), Expect = 5.6e-97, Sum P(3) = 5.6e-97
Identities = 96/205 (46%), Positives = 139/205 (67%)
Query: 342 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 401
RK+IL+TNI ETS+TI I YVID G K ++Y+P G+ESL+ +P SKA QR+GRAG
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 402 REGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRAS 461
R+ GKCFRL+ + F L D++ PEI+RC +S++IL LK+LG+DDII FDF++ PS
Sbjct: 863 RKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPIV 922
Query: 462 IIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQ-FNCLEEMLITVAM 520
IIK LE L+ LGAL D+ L+ G +MA P D SK ++ A + +NC++E+L +M
Sbjct: 923 IIKGLELLYSLGALNDEGNLTR-TGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVASM 981
Query: 521 LS-VESIFFRSPGEVRRGKKCNEIF 544
L+ +IF+ G+ + + ++F
Sbjct: 982 LTHANNIFYVQKGKEKEAENIKKMF 1006
Score = 287 (106.1 bits), Expect = 5.6e-97, Sum P(3) = 5.6e-97
Identities = 66/166 (39%), Positives = 97/166 (58%)
Query: 24 FNDSSSRRQK----ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLF 79
F D R++K I+ +RK LPI S +++ ++ N ILI+VGETGSGK+TQL Q+L+
Sbjct: 417 FEDIKKRKEKKMKKIIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLY 476
Query: 80 HAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI---- 135
+ G +I TQP EE V++G+ VGY IRF ++TS +T+I
Sbjct: 477 ECKYHMYGNII-CTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMT 535
Query: 136 -----KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
+ L +P L S +I+DEAHER +HTDV+L ++K + N R
Sbjct: 536 DGMFLRLLLYNPTLEDISVLIIDEAHERALHTDVILPIVKDICNFR 581
Score = 275 (101.9 bits), Expect = 5.6e-97, Sum P(3) = 5.6e-97
Identities = 54/115 (46%), Positives = 79/115 (68%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
++++I SA+LDA S YF CA +V GR++ V+I YT+ E +Y+ A +ITI Q+H+
Sbjct: 584 IRVVISSATLDAEKISTYFNCAPIFYVPGRKYNVDIYYTINNESNYISAIVITILQIHIT 643
Query: 280 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
+ GDILVFL GQ EIE V++ ++ +L +L R LV +PI+SSLP E Q R+F
Sbjct: 644 QGKGDILVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIF 698
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 469 (170.2 bits), Expect = 5.6e-97, Sum P(3) = 5.6e-97
Identities = 96/205 (46%), Positives = 139/205 (67%)
Query: 342 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 401
RK+IL+TNI ETS+TI I YVID G K ++Y+P G+ESL+ +P SKA QR+GRAG
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 402 REGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRAS 461
R+ GKCFRL+ + F L D++ PEI+RC +S++IL LK+LG+DDII FDF++ PS
Sbjct: 863 RKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPIV 922
Query: 462 IIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQ-FNCLEEMLITVAM 520
IIK LE L+ LGAL D+ L+ G +MA P D SK ++ A + +NC++E+L +M
Sbjct: 923 IIKGLELLYSLGALNDEGNLTR-TGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVASM 981
Query: 521 LS-VESIFFRSPGEVRRGKKCNEIF 544
L+ +IF+ G+ + + ++F
Sbjct: 982 LTHANNIFYVQKGKEKEAENIKKMF 1006
Score = 287 (106.1 bits), Expect = 5.6e-97, Sum P(3) = 5.6e-97
Identities = 66/166 (39%), Positives = 97/166 (58%)
Query: 24 FNDSSSRRQK----ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLF 79
F D R++K I+ +RK LPI S +++ ++ N ILI+VGETGSGK+TQL Q+L+
Sbjct: 417 FEDIKKRKEKKMKKIIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLY 476
Query: 80 HAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI---- 135
+ G +I TQP EE V++G+ VGY IRF ++TS +T+I
Sbjct: 477 ECKYHMYGNII-CTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMT 535
Query: 136 -----KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
+ L +P L S +I+DEAHER +HTDV+L ++K + N R
Sbjct: 536 DGMFLRLLLYNPTLEDISVLIIDEAHERALHTDVILPIVKDICNFR 581
Score = 275 (101.9 bits), Expect = 5.6e-97, Sum P(3) = 5.6e-97
Identities = 54/115 (46%), Positives = 79/115 (68%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
++++I SA+LDA S YF CA +V GR++ V+I YT+ E +Y+ A +ITI Q+H+
Sbjct: 584 IRVVISSATLDAEKISTYFNCAPIFYVPGRKYNVDIYYTINNESNYISAIVITILQIHIT 643
Query: 280 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
+ GDILVFL GQ EIE V++ ++ +L +L R LV +PI+SSLP E Q R+F
Sbjct: 644 QGKGDILVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIF 698
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 662 (238.1 bits), Expect = 1.2e-96, Sum P(2) = 1.2e-96
Identities = 147/359 (40%), Positives = 220/359 (61%)
Query: 193 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 246
S +I+D ++ + +NT L++ R+ + LKLI+ SA++DA F+ +FG H+
Sbjct: 647 SAIIMDEAHERS-LNTDVLFGLLREVVARR-SDLKLIVTSATMDAEKFASFFGNVPIFHI 704
Query: 247 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 306
GR FPV+IL++ P+ DY++A + QVHL APGDIL+F+ GQE+IE + E L
Sbjct: 705 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 764
Query: 307 LQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 366
+L A L +PI+S LPS+ Q ++F A G RK I+ATNIAETS+T+ GI +VID
Sbjct: 765 EELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 823
Query: 367 GFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTK 425
G+ K ++ P G L ++ I K Q +G +G P +C RLY ++ + ++L +T
Sbjct: 824 GYCKLKVSSPSLGGSDLKIMEIQKIQKNINTGCSGCTSP-RCCRLYTQSAYKNELLTTTV 882
Query: 426 PEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPV 485
PEI+R NL+NV+L LK+LGV D++ F FM+ P +++ S+ QL++LGAL + L+
Sbjct: 883 PEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTS-T 941
Query: 486 GHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIF 544
G M PLDP SK LIV+ C E+L+ V+MLSV +IF+R G + E F
Sbjct: 942 GRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKF 1000
Score = 337 (123.7 bits), Expect = 1.2e-96, Sum P(2) = 1.2e-96
Identities = 83/184 (45%), Positives = 112/184 (60%)
Query: 6 EGEVSNSTHNPKL-HSKPFFNDSS--SRRQKILQQRKSLPIASVEKRLVEEVRKNDILII 62
+G+V T H K SS ++++ IL+QR+ LPI +V++ L+ +R N I+I+
Sbjct: 494 DGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIV 553
Query: 63 VGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYS 122
VGETGSGKTTQL Q+L G+ G +IG TQP EE G LG+ VGY+
Sbjct: 554 VGETGSGKTTQLTQYLHEDGYTDYG-MIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYA 612
Query: 123 IRFDDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
IRF+D TS ST IK E+L + L YSAII+DEAHER+++TDVL GLL++V
Sbjct: 613 IRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVV 672
Query: 174 NARS 177
RS
Sbjct: 673 ARRS 676
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 801 (287.0 bits), Expect = 1.1e-95, Sum P(2) = 1.1e-95
Identities = 157/317 (49%), Positives = 227/317 (71%)
Query: 219 PLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHL 278
PLK+I+MSA++D FS+YF A ++++GRQ P+++ YT P+ DYL A L+++FQ+H
Sbjct: 134 PLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIH- 192
Query: 279 DEAPG--DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAP 336
EAP DILVFLTGQEEIE++ + ++ LP+ ++ +P+++SLP QQ+RVF
Sbjct: 193 QEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQG 252
Query: 337 AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQR 396
A G+RKVI++TNIAETS+TI GIKYV+D G VKA+ Y+P G+E L V +SK QA QR
Sbjct: 253 APKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 312
Query: 397 SGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEK 456
+GRAGRE G C+RLY E+EF+K + T PEI+RCNL++V+LQL A+ V +++ FDFM K
Sbjct: 313 TGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSK 372
Query: 457 PSRASIIKSLEQLFLLGALT--DDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEM 514
PS I ++ QL LLGAL DD P+G +MA PL+P ++K ++++ +F+C EE+
Sbjct: 373 PSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEI 432
Query: 515 LITVAMLSVESIFFRSP 531
L V++LSV+S+ P
Sbjct: 433 LTIVSLLSVDSVLHNPP 449
Score = 170 (64.9 bits), Expect = 1.1e-95, Sum P(2) = 1.1e-95
Identities = 36/69 (52%), Positives = 46/69 (66%)
Query: 119 VGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLL 169
VGY++RFDD TS TRIK EA+ D L +YS +I+DEAHERT+HTDVL G++
Sbjct: 61 VGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVV 120
Query: 170 KKVQNARSK 178
K Q R +
Sbjct: 121 KAAQKRRKE 129
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 646 (232.5 bits), Expect = 1.4e-95, Sum P(2) = 1.4e-95
Identities = 146/357 (40%), Positives = 223/357 (62%)
Query: 193 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 246
S +ILD ++ + +NT +K+ + + K++I SA+LD SE+F ++V
Sbjct: 119 SVIILDEAHERS-LNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNV 177
Query: 247 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 306
G+ +PVEILY+ Y++++L +H+ E GDIL+F+TGQ++IE + ++E++
Sbjct: 178 PGKLYPVEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKV 237
Query: 307 LQLPEAS-RKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVID 365
L E S + P+ SLP E Q+RVF+P R+ I++TNIAETS+T+ G+ YVID
Sbjct: 238 RSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVID 297
Query: 366 PGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDST 424
G+VK R Y+P GM SL V+ ISK QA QR+GRAGR PGKC+RLYP + D D+T
Sbjct: 298 SGYVKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDAT 357
Query: 425 KPEIKRCNLSNVILQLKALGVDDI--IGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLS 482
PEI+R +L+ +L LK+L + DI + FDF++ PS S+ +L+QL+ + A+ ++ ++
Sbjct: 358 IPEIQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAIT 417
Query: 483 DPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFF--RS-PGEVRR 536
+G M+ LPL+P S+ LI A + CL + L VAMLS E+ RS P E +R
Sbjct: 418 R-IGRTMSDLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKKR 473
Score = 324 (119.1 bits), Expect = 1.4e-95, Sum P(2) = 1.4e-95
Identities = 67/149 (44%), Positives = 98/149 (65%)
Query: 40 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 99
+LPI E+++VE V KN +++I+GETGSGK+TQL Q L G+ + G +I +TQP
Sbjct: 3 NLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSG-VIAITQPRRVA 61
Query: 100 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSAI 150
+E V LG+ VGY+IRF+DRT++ TRIK E+L +P L YS I
Sbjct: 62 AVSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVI 121
Query: 151 IVDEAHERTVHTDVLLGLLKKVQNARSKS 179
I+DEAHER+++TD+LLGL+K++ R+ +
Sbjct: 122 ILDEAHERSLNTDILLGLVKRLVRIRASN 150
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 514 (186.0 bits), Expect = 9.1e-95, Sum P(3) = 9.1e-95
Identities = 109/212 (51%), Positives = 148/212 (69%)
Query: 320 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 379
PI+S L SEQQ ++F RK+I++TNIAETS+T+ GIKYVID G+ K ++Y+ G
Sbjct: 776 PIYSQLSSEQQSKIFKKY--DLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIG 833
Query: 380 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVIL 438
M+ L V PIS+A A QRSGRAGR G G C+RLY EN F L + PEI+R NLSNV+L
Sbjct: 834 MDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNVVL 893
Query: 439 QLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIY 498
LK+L V ++ FDF++ PS+ SII SL +L++LGA+ ++ L+D +G +M + PLDP
Sbjct: 894 LLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTD-IGRKMVQFPLDPPL 952
Query: 499 SKALIVAGQFNCLEEMLITVAMLSVESIFFRS 530
SK +I + F C +E+LI V+MLS SIF S
Sbjct: 953 SKIVIYSQNFQCTKEILIIVSMLSSPSIFLES 984
Score = 311 (114.5 bits), Expect = 9.1e-95, Sum P(3) = 9.1e-95
Identities = 66/151 (43%), Positives = 98/151 (64%)
Query: 31 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 90
++++L+ ++SLPI + L++ V N+I+IIVGETGSGKTTQ+ Q+L+ G+ R+G +I
Sbjct: 469 KEELLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNG-II 527
Query: 91 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 141
TQP E V++G VGY+IRF+D T+ T+I+ E L D
Sbjct: 528 CCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLND 587
Query: 142 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
L +YS II+DEAHER+++TDVLLG+LK +
Sbjct: 588 KELDKYSVIIMDEAHERSINTDVLLGILKNI 618
Score = 183 (69.5 bits), Expect = 9.1e-95, Sum P(3) = 9.1e-95
Identities = 50/135 (37%), Positives = 77/135 (57%)
Query: 193 SDMILDRGNDTNGINT------LKQ-CQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVH 245
S +I+D ++ + INT LK C R LKLI+ SA++DA+ FS +FG A +
Sbjct: 594 SVIIMDEAHERS-INTDVLLGILKNICLKRN--DLKLIVTSATIDAKKFSAFFGNAPIYN 650
Query: 246 VQGRQFPVEILYTLYPEPDYLDATLITIFQVHL-----DEAPGDILVFLTGQEEIESVER 300
+QGR F V I Y P DY++ + Q+H+ D GDIL+F+TGQE+I +
Sbjct: 651 IQGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQEDINATCY 710
Query: 301 LVQERLLQLPEASRK 315
L+ ER ++ E+ ++
Sbjct: 711 LLSERFYEVYESYKE 725
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 514 (186.0 bits), Expect = 9.1e-95, Sum P(3) = 9.1e-95
Identities = 109/212 (51%), Positives = 148/212 (69%)
Query: 320 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 379
PI+S L SEQQ ++F RK+I++TNIAETS+T+ GIKYVID G+ K ++Y+ G
Sbjct: 776 PIYSQLSSEQQSKIFKKY--DLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIG 833
Query: 380 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVIL 438
M+ L V PIS+A A QRSGRAGR G G C+RLY EN F L + PEI+R NLSNV+L
Sbjct: 834 MDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNVVL 893
Query: 439 QLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIY 498
LK+L V ++ FDF++ PS+ SII SL +L++LGA+ ++ L+D +G +M + PLDP
Sbjct: 894 LLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTD-IGRKMVQFPLDPPL 952
Query: 499 SKALIVAGQFNCLEEMLITVAMLSVESIFFRS 530
SK +I + F C +E+LI V+MLS SIF S
Sbjct: 953 SKIVIYSQNFQCTKEILIIVSMLSSPSIFLES 984
Score = 311 (114.5 bits), Expect = 9.1e-95, Sum P(3) = 9.1e-95
Identities = 66/151 (43%), Positives = 98/151 (64%)
Query: 31 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 90
++++L+ ++SLPI + L++ V N+I+IIVGETGSGKTTQ+ Q+L+ G+ R+G +I
Sbjct: 469 KEELLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNG-II 527
Query: 91 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 141
TQP E V++G VGY+IRF+D T+ T+I+ E L D
Sbjct: 528 CCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLND 587
Query: 142 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
L +YS II+DEAHER+++TDVLLG+LK +
Sbjct: 588 KELDKYSVIIMDEAHERSINTDVLLGILKNI 618
Score = 183 (69.5 bits), Expect = 9.1e-95, Sum P(3) = 9.1e-95
Identities = 50/135 (37%), Positives = 77/135 (57%)
Query: 193 SDMILDRGNDTNGINT------LKQ-CQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVH 245
S +I+D ++ + INT LK C R LKLI+ SA++DA+ FS +FG A +
Sbjct: 594 SVIIMDEAHERS-INTDVLLGILKNICLKRN--DLKLIVTSATIDAKKFSAFFGNAPIYN 650
Query: 246 VQGRQFPVEILYTLYPEPDYLDATLITIFQVHL-----DEAPGDILVFLTGQEEIESVER 300
+QGR F V I Y P DY++ + Q+H+ D GDIL+F+TGQE+I +
Sbjct: 651 IQGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQEDINATCY 710
Query: 301 LVQERLLQLPEASRK 315
L+ ER ++ E+ ++
Sbjct: 711 LLSERFYEVYESYKE 725
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 670 (240.9 bits), Expect = 1.6e-94, Sum P(2) = 1.6e-94
Identities = 147/327 (44%), Positives = 216/327 (66%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHL- 278
LKLII SA+++A+ FS +FG A + GR FPV+ +YT P DY++A + ++HL
Sbjct: 499 LKLIITSATMNAKKFSAFFGNAPQFTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLA 558
Query: 279 -DEAPGDILVFLTGQEEIESVERLVQERLLQLP---------EASRKLVTVPIFSSLPSE 328
D + GDIL+F+TGQE+IE+ +QE+ LQ+ E + +PI+S+LP++
Sbjct: 559 NDCSSGDILIFMTGQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPAD 618
Query: 329 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 388
Q ++F RK+I+ATNIAETS+TI GI+YVID G+ K ++Y+P G++SL++ PI
Sbjct: 619 LQFKIFQDLHGTKRKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPI 678
Query: 389 SKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGV-D 446
SKA A QRSGRAGR PG +RLY E+ F + + T PEI+R NLSN +L LK+L V D
Sbjct: 679 SKANADQRSGRAGRTAPGTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTD 738
Query: 447 DIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAG 506
++ F F++KP + + SL +L+ +GA+ +L+ P+G QMA+ PL P SK L++A
Sbjct: 739 ELSKFPFIDKPPLQTFLSSLYELWFIGAIDTSGQLT-PLGLQMAKFPLQPSLSKILLIAV 797
Query: 507 QFNCLEEMLITVAMLSVESIFFRSPGE 533
+ C +EML V+MLSV +F+R P E
Sbjct: 798 RNGCSDEMLTIVSMLSVPQVFYR-PKE 823
Score = 303 (111.7 bits), Expect = 1.6e-94, Sum P(2) = 1.6e-94
Identities = 73/185 (39%), Positives = 104/185 (56%)
Query: 3 SVAEGEVSNSTHNPKLHSKP---FFNDSS---SRRQKILQQRKSLPIASVEKRLVEEVRK 56
+ A GEV +N K K +D++ + I ++ LP+ +L+ +R+
Sbjct: 306 NTAMGEVLGLENNNKAKDKSNQKICDDTALFTPSKDDIKHTKEQLPVFRCRSQLLSLIRE 365
Query: 57 NDILIIVGETGSGKTTQLPQFLFHAGFCRD-GKLIGVTQPXXXXXXXXXXXXXEESGVEL 115
N +++I+GETGSGKTTQL Q+L+ G+ D GK I VTQP E V L
Sbjct: 366 NQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVVTQPRRVAAISVAKRVAMEMQVPL 425
Query: 116 GQRVGYSIRFDDRT-STSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVL 165
G+ VGYSIRF+D T S T++K E LLD L +YS +I+DEAHER+++TD+L
Sbjct: 426 GKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLDKYSCVIIDEAHERSLNTDIL 485
Query: 166 LGLLK 170
LG K
Sbjct: 486 LGFFK 490
Score = 52 (23.4 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 414 ENEFDKLEDSTKPEIKRCN--LSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLE 467
E+ DK+ED I+RC +VI +LK D+ D +K + +I+ E
Sbjct: 1005 EHTLDKVEDDIDINIRRCKDMRDSVIQELKM--TDNSNKEDKKQKTKKQNILNGKE 1058
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
Identities = 227/510 (44%), Positives = 303/510 (59%)
Query: 41 LPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXX 100
LPIA + L+ V N + ++VG+TGSGKTTQ+PQFL AG+C DGKLIGVTQP
Sbjct: 21 LPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQFLEKAGWCSDGKLIGVTQPRRIAA 80
Query: 101 XXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKEALLDPYLSRYSAIIVDEAHERTV 160
EE G E+G+ VGYSIRF+D TS +TRIK L D L R + +VD R
Sbjct: 81 TTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIK-FLTDGLLIREA--LVDPLLSR-- 135
Query: 161 HTDVLLGLLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPL 220
++ V+ V A +S +D++L G+ LK+ + +K L
Sbjct: 136 YSIVM------VDEAHERSVS-----------TDILL-------GL--LKKIR-KKRPEL 168
Query: 221 KLIIMSASLDARGFSEYF----GCAKA------------VHVQGRQFPVEILYTLYPEPD 264
++II SA+L A F +F G ++ V ++GR +P++ILY P D
Sbjct: 169 RIIISSATLQAEQFLAFFSSTLGGSRQDREEPQGTIGTIVSLEGRTYPIDILYLESPAED 228
Query: 265 YLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 324
YL + T+ VH +E GDILVFLTG++EIE+ V ER L R L+ +P+FS
Sbjct: 229 YLQRAVSTVLDVHENEPDGDILVFLTGRDEIEAAVDAVSERTAHLTSQDRGLLPLPLFSG 288
Query: 325 LPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLL 384
L +EQQM +F A A RKVI +TNIAE SVTI GI YV+D GFVK R Y+P G+E+L
Sbjct: 289 LSTEQQMYIFEEAPANTRKVIFSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLT 348
Query: 385 VVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALG 444
VPISKA A QR+GRAGR PGKCFRLY E + L D+ PE++R NL+ ILQLKALG
Sbjct: 349 AVPISKAAAAQRAGRAGRTKPGKCFRLYTEESYTSLSDTNIPEVQRSNLAPFILQLKALG 408
Query: 445 VDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIV 504
+D+++ FDF+ P + K+LE L+ LGAL D KL+ P+G +MA L +DP+ +K L+
Sbjct: 409 IDNVLHFDFLTPPPAELMTKALELLYSLGALDDYAKLTKPLGLRMAELAVDPMMAKTLLS 468
Query: 505 AGQFNCLEEMLITVAMLSVES-IFFRSPGE 533
A F CL EML AM S ++ + GE
Sbjct: 469 AESFGCLSEMLTIAAMTSAGGDVWIQHEGE 498
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 637 (229.3 bits), Expect = 1.8e-93, Sum P(2) = 1.8e-93
Identities = 145/367 (39%), Positives = 225/367 (61%)
Query: 193 SDMILDRGND----TNGI-NTLKQC--QGRKFAPLKLIIMSASLDARGFSEYFGCAKAVH 245
S +ILD ++ T+ I LKQ G++ LK+++MSA+L+A FS +FG A ++
Sbjct: 294 STIILDEAHERTILTDLIMGFLKQIITSGKR-KDLKIVVMSATLNAELFSNFFGNAPILY 352
Query: 246 VQGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQER 305
++G+ +PV Y D +D + +I Q++L+E GD+L FL GQEEI++ + +++
Sbjct: 353 IEGKMYPVSQFYLDAESEDIVDTMIRSIIQINLNEPEGDVLCFLPGQEEIDNCVKSLEQL 412
Query: 306 LLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVID 365
QLP + +V +P++++L QQ ++F G RKVILATNIAETS+T+ G+KYVID
Sbjct: 413 APQLPREAPLIVPLPLYAALSPGQQSKIFEKLPKGRRKVILATNIAETSITVSGVKYVID 472
Query: 366 PGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTK 425
G K +++ G+ +LL PIS+A A QR+GRAGRE GK FRLYPE+ + L +
Sbjct: 473 SGLRKIKVWKHNLGLSTLLTTPISQASARQRAGRAGRESEGKVFRLYPESTYMALPKQQE 532
Query: 426 PEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPV 485
EIKR ++ +L LK LGVDD++ + ++E P + +I+ +L L+ LGAL D K++ +
Sbjct: 533 SEIKRNDIILPVLTLKKLGVDDLLNWSWLEYPGQDAILSALNTLYTLGALNDSGKVTT-L 591
Query: 486 GHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIFC 545
G++M+ LPL P S LI A +F L ++ + LSV+++ GE R +EI
Sbjct: 592 GYKMSILPLPPQLSVVLITAAEFGVLSPVIDIASCLSVDNLITNVTGEAR-----DEINF 646
Query: 546 KSRWRSP 552
K R P
Sbjct: 647 KRRQHCP 653
Score = 313 (115.2 bits), Expect = 1.8e-93, Sum P(2) = 1.8e-93
Identities = 70/176 (39%), Positives = 107/176 (60%)
Query: 6 EGEVSNSTHNPKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGE 65
+ E N+T N S+ F +++ +Q +LQ R+ LPI + +++E + N + I++GE
Sbjct: 151 DDEEENNTFN---FSQNSFQLAATAQQ-LLQIREKLPIYHHKDKIIEYINNNQVTIVIGE 206
Query: 66 TGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRF 125
TGSGK+TQ+PQFL + K+IGVTQP EE G +LGQ VGY +RF
Sbjct: 207 TGSGKSTQIPQFLMP----ENPKMIGVTQPRRVAAASLAARVSEEYGCKLGQDVGYQVRF 262
Query: 126 DDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
+ T+ T++K E +LD L++YS II+DEAHERT+ TD+++G LK++
Sbjct: 263 TNMTNRQTKLKYLTDGMLLREIMLDSNLTKYSTIILDEAHERTILTDLIMGFLKQI 318
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 623 (224.4 bits), Expect = 1.7e-91, Sum P(2) = 1.7e-91
Identities = 143/337 (42%), Positives = 208/337 (61%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHL- 278
LKLI+ SA+++A F+++FG A H+ GR FPVE+ + DY++ + + +HL
Sbjct: 512 LKLIVTSATMNANRFTKFFGVAPQFHIPGRTFPVEVFFNRDVNMDYVEMAVKQVLTIHLG 571
Query: 279 -------DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQM 331
+ GDILVF+TGQE+IE L++E+L L E L PI+S++P + Q
Sbjct: 572 RWNADNNNANDGDILVFMTGQEDIEITCDLIKEKL-NLLEDPPPLDIFPIYSTMPQDLQK 630
Query: 332 RVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKA 391
++F RKV++ATNIAETS+T+ GIKYVID G VK ++Y+P GM++L VVPIS A
Sbjct: 631 KIFNKTNLQRRKVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLA 690
Query: 392 QALQRSGRAGREGPGKCFRLYPEN--EFDKLEDSTKPEIKRCNLSNVILQLKALGVDDII 449
A QRSGRAGR G G +RLY E E D + PEI+R NLSN++L LK+L V+DI
Sbjct: 691 NADQRSGRAGRTGAGIAYRLYTEKATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDIN 750
Query: 450 GFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQ-- 507
F F++ P + + SL L+ +GAL + +L+ +GH M + P++P +K ++++ Q
Sbjct: 751 SFPFLDPPPKDLLNCSLYDLWAIGALDNLGELTK-LGHSMTQFPIEPTLAKLILLSTQPE 809
Query: 508 FNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIF 544
F+C EE++ VAMLSV +IF R E F
Sbjct: 810 FHCSEEVVTIVAMLSVPNIFNRPKERANEADMAREKF 846
Score = 324 (119.1 bits), Expect = 1.7e-91, Sum P(2) = 1.7e-91
Identities = 77/181 (42%), Positives = 106/181 (58%)
Query: 8 EVSNSTHNPKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETG 67
+ +N+T K K + + ++ Q I QQRKSLP +V L+ +R N + I++GETG
Sbjct: 326 DTANTTEEIKQEEKNA-DVNETKHQDIQQQRKSLPAFAVRNDLLTTIRDNQVTIVIGETG 384
Query: 68 SGKTTQLPQFLFHAGFC----RDG--KLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGY 121
SGKTTQL QFL+ GF ++G ++I TQP EE +LG+ VGY
Sbjct: 385 SGKTTQLTQFLYEDGFGANIDKNGEKRIIACTQPRRVAAMSVAKRVSEEMNCKLGEEVGY 444
Query: 122 SIRFDDRTSTS-TRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKK 171
SIRF+D+T T IK E L DP L+ YS II+DEAHER+++TD+LLGL K
Sbjct: 445 SIRFEDKTDNKKTVIKYMTEGILLREILADPMLANYSCIIMDEAHERSLNTDILLGLFKN 504
Query: 172 V 172
+
Sbjct: 505 L 505
Score = 38 (18.4 bits), Expect = 2.4e-61, Sum P(2) = 2.4e-61
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 1 MPSVAEGEVSNSTHNPKLHSKPFFNDSSS 29
+P + N+ H PK K FN+S +
Sbjct: 191 LPQRQRKRIRNTRH-PKKTPKTSFNESGA 218
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 587 (211.7 bits), Expect = 1.3e-90, Sum P(2) = 1.3e-90
Identities = 138/345 (40%), Positives = 208/345 (60%)
Query: 209 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD--- 264
LK +G K PLK+++MSA+L+ S ++G + GR +PV E L D
Sbjct: 159 LKGSRGNK-TPLKVVVMSATLETEKLSSFYGNCPVFTIPGRTYPVKETFCNLIGPKDKES 217
Query: 265 --YLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQER--LLQL-----PEASRK 315
Y+ + VH +EA GDILVFLTGQ EIE L+ E+ +L +
Sbjct: 218 SVYVKEVVKMTLDVHTNEAAGDILVFLTGQSEIEKACDLLFEKAEILDYRYDVHDRSVDG 277
Query: 316 LVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYD 375
L+ + ++ S+P++QQ ++F PA G RK ++ATNIA TS+TI GI+Y++D GFVK ++
Sbjct: 278 LLILSLYGSMPTDQQRQIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHN 337
Query: 376 PVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLS 434
G++ L VVPISK++A QR+GRAGR GKCFR+Y ++ +D + + T PEI+R +L+
Sbjct: 338 SRVGLDILEVVPISKSEAQQRAGRAGRTAAGKCFRIYSKDFWDTCMPEYTIPEIQRTSLT 397
Query: 435 NVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPL 494
+VIL LK LGV D+I F +++ P I+ +L+QL+ A+ +++ +G M PL
Sbjct: 398 SVILTLKCLGVHDVIRFPYLDCPEERFILTALKQLYQYDAIDRRGEVTK-LGRLMVEFPL 456
Query: 495 DPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKK 539
P ++AL+ A C + ML AMLSVE+IF R PG+ + K+
Sbjct: 457 PPNLTRALLKAAALGCEDIMLPVAAMLSVENIFIR-PGKPEKQKE 500
Score = 336 (123.3 bits), Expect = 1.3e-90, Sum P(2) = 1.3e-90
Identities = 72/144 (50%), Positives = 93/144 (64%)
Query: 37 QRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPX 96
+ K LPI + +LV+ V +N LI+ GETGSGKTTQLPQ+L+ AG R+G+ IGVTQP
Sbjct: 14 ESKKLPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLSRNGR-IGVTQPR 72
Query: 97 XXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRY 147
E V LG+ VGY +RFDD ++ T IK E L DP L++Y
Sbjct: 73 RVAAITVAQRVSSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCLLREILADPSLTQY 132
Query: 148 SAIIVDEAHERTVHTDVLLGLLKK 171
S +I+DEAHER+++TDVLLGLLKK
Sbjct: 133 SIVILDEAHERSLNTDVLLGLLKK 156
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 629 (226.5 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
Identities = 127/310 (40%), Positives = 198/310 (63%)
Query: 221 KLIIMSASLDARGFSEYFGCAKA--VHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHL 278
+L++ SAS+DA S++FG K + ++G+ FPVE L+ P +Y+D+ + T+ ++
Sbjct: 173 RLVLSSASVDANKLSQFFGQDKVCTMSIEGKLFPVETLFLQKPTENYVDSAIETVININS 232
Query: 279 DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAA 338
PGDILVFL+G++EIE + +++ L+ E + LV +P+ + L ++QMRVF
Sbjct: 233 TYPPGDILVFLSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYD 292
Query: 339 AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSG 398
FRKVI +TNIAETS+TI GI YV+D GF K R+Y+P L+ VPISK+ A+QRSG
Sbjct: 293 GDFRKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSG 352
Query: 399 RAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPS 458
RAGR GK FRLY E + +++ + +I C++S ++L LK LG+ +I+ F F +P
Sbjct: 353 RAGRTMRGKVFRLYTEKAYSLMKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPP 412
Query: 459 RASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITV 518
++ +LE L+LLG L + L+DP+G Q++ LD SKAL+ + QF C E+L
Sbjct: 413 TVHLMAALEDLYLLGVLDESGNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSIA 472
Query: 519 AMLSVESIFF 528
++L+ +F+
Sbjct: 473 SILTAGEVFY 482
Score = 290 (107.1 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
Identities = 63/150 (42%), Positives = 83/150 (55%)
Query: 37 QRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPX 96
Q+K LPI +L+ V +N I I++G TG GKTTQ+PQFL+ AG+ +IG TQP
Sbjct: 21 QKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPR 80
Query: 97 XXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRY 147
E G GYSI+FD S T+IK E DP L RY
Sbjct: 81 RLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLERY 140
Query: 148 SAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
S +I+DE HERT+ TD+LLG+LK++ R+
Sbjct: 141 SIVILDEVHERTLSTDLLLGVLKRILEKRN 170
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 624 (224.7 bits), Expect = 4.4e-90, Sum P(2) = 4.4e-90
Identities = 136/317 (42%), Positives = 202/317 (63%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
L++I+MSA+L A FSE+F A + V+GR+F V+ Y P D +DA + Q++
Sbjct: 230 LRIIVMSATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQG 289
Query: 280 EAPGDILVFLTGQEEIESVERLVQERLLQLP-EASRKLVT-VPIFSSLPSEQQMRVFAPA 337
E GDIL FL GQEEI+ ++++ + EA L+ P++++LP+ QQ VFAP
Sbjct: 290 EELGDILCFLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPI 349
Query: 338 AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRS 397
RKV+ +TNIAETSVTI G+K+V+D G K +++ G+ +LL VPIS+A A+QRS
Sbjct: 350 KGFKRKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRS 409
Query: 398 GRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 457
GRAGRE GK FRLY E+++ KL ++PEI R ++++ +L LK GVDD++ + + E P
Sbjct: 410 GRAGRESEGKSFRLYCESDYVKLPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENP 469
Query: 458 SRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLIT 517
+ +I+ L++L+ LGAL K++ G QMA LPL P S LI A + CL +++
Sbjct: 470 GKEAIVMGLQELYELGALDTRGKITKR-GQQMALLPLQPHLSSVLIKASEVGCLSQVIDI 528
Query: 518 VAMLSVESIFFR-SPGE 533
V+ LSVE++ SP E
Sbjct: 529 VSCLSVENLLLNPSPEE 545
Score = 294 (108.6 bits), Expect = 4.4e-90, Sum P(2) = 4.4e-90
Identities = 61/164 (37%), Positives = 97/164 (59%)
Query: 24 FNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGF 83
+ SR +L+ R++LP+ ++ ++ + N + +++GETGSGK+TQ+PQF+ +
Sbjct: 64 YKSLKSRASDLLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLY 123
Query: 84 -CRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK------ 136
+ I VTQP +E G +LG++VGYS+RFD+ T+T TR+K
Sbjct: 124 DTKKHGSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGM 183
Query: 137 ---EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKK-VQNAR 176
E +++ L YS I++DEAHERTV TD++LG LK +Q R
Sbjct: 184 LLRELMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPR 227
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 794 (284.6 bits), Expect = 1.9e-87, Sum P(2) = 1.9e-87
Identities = 158/322 (49%), Positives = 228/322 (70%)
Query: 216 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+F P LK+++ SA++D FS +F A + GR+FPV+I YT PE DYL+A ++++
Sbjct: 60 RFRPELKVLVASATMDTARFSTFFDGAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVL 119
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q R+F
Sbjct: 120 QIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIF 179
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
P G RKV++ATNIAETS+TI GI YV+DPGF K + Y+P GMESL V P SKA A
Sbjct: 180 QPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASAN 239
Query: 395 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR GKCFRLY + +LE++T PEI+R +L NV+L LK+LG+ D++ FDF
Sbjct: 240 QRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDF 299
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
++ P +++ +LEQL+ LGAL +L+ G +MA LP+DP+ SK ++ + +++C EE
Sbjct: 300 LDPPPYETLLLALEQLYALGALNHLGELTTS-GRKMAELPVDPMLSKMILASEKYSCSEE 358
Query: 514 MLITVAMLSVE-SIFFRSPGEV 534
+L AMLSV SIF+R +V
Sbjct: 359 ILTVAAMLSVNNSIFYRPKDKV 380
Score = 99 (39.9 bits), Expect = 1.9e-87, Sum P(2) = 1.9e-87
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 145 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
S+ ++VDEAHERT+HTD+L GL+K V R
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFR 62
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 794 (284.6 bits), Expect = 1.9e-87, Sum P(2) = 1.9e-87
Identities = 158/322 (49%), Positives = 228/322 (70%)
Query: 216 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+F P LK+++ SA++D FS +F A + GR+FPV+I YT PE DYL+A ++++
Sbjct: 60 RFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVL 119
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q R+F
Sbjct: 120 QIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIF 179
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
P G RKV++ATNIAETS+TI GI YV+DPGF K + Y+P GMESL V P SKA A
Sbjct: 180 QPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASAN 239
Query: 395 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 453
QR+GRAGR GKCFRLY + +LE++T PEI+R +L NV+L LK+LG+ D++ FDF
Sbjct: 240 QRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDF 299
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
++ P +++ +LEQL+ LGAL +L+ G +MA LP+DP+ SK ++ + +++C EE
Sbjct: 300 LDPPPYETLLLALEQLYALGALNHLGELTTS-GRKMAELPVDPMLSKMILASEKYSCSEE 358
Query: 514 MLITVAMLSVE-SIFFRSPGEV 534
+L AMLSV SIF+R +V
Sbjct: 359 ILTVAAMLSVNNSIFYRPKDKV 380
Score = 99 (39.9 bits), Expect = 1.9e-87, Sum P(2) = 1.9e-87
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 145 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
S+ ++VDEAHERT+HTD+L GL+K V R
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFR 62
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 558 (201.5 bits), Expect = 3.5e-86, Sum P(2) = 3.5e-86
Identities = 130/325 (40%), Positives = 202/325 (62%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----YLDATLITI 273
LK+++MSA+++ S +FG + GR +PV E L D Y+ A +
Sbjct: 204 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 263
Query: 274 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 326
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 264 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 323
Query: 327 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 386
++QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK ++P G++ L VV
Sbjct: 324 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 383
Query: 387 PISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGV 445
PISK++ALQRSGRAGR GKCFR+Y ++ +++ + D PEIKR +L++V+L LK L +
Sbjct: 384 PISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAI 443
Query: 446 DDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVA 505
D+I F +++ P+ I+++L+QL+ A+ ++ +G M PL P + A+I A
Sbjct: 444 HDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPPHLTCAVIKA 502
Query: 506 GQFNCLEEMLITVA-MLSVESIFFR 529
+C E++L+ +A MLSVE++F R
Sbjct: 503 ASLDC-EDLLLPIAAMLSVENVFIR 526
Score = 323 (118.8 bits), Expect = 3.5e-86, Sum P(2) = 3.5e-86
Identities = 71/153 (46%), Positives = 93/153 (60%)
Query: 40 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 99
+ PI K+L++ VR N LI+ G TGSGKTTQLP++L+ AGF + G +IGVTQP
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVA 110
Query: 100 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKE----ALL-----DPYLSRYSAI 150
EE LG +VGY +RFDD +S T IK LL DP L+++S I
Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVI 170
Query: 151 IVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 183
I+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 203
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 558 (201.5 bits), Expect = 3.5e-86, Sum P(2) = 3.5e-86
Identities = 130/325 (40%), Positives = 202/325 (62%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----YLDATLITI 273
LK+++MSA+++ S +FG + GR +PV E L D Y+ A +
Sbjct: 204 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 263
Query: 274 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 326
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 264 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 323
Query: 327 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 386
++QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK ++P G++ L VV
Sbjct: 324 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 383
Query: 387 PISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGV 445
PISK++ALQRSGRAGR GKCFR+Y ++ +++ + D PEIKR +L++V+L LK L +
Sbjct: 384 PISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAI 443
Query: 446 DDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVA 505
D+I F +++ P+ I+++L+QL+ A+ ++ +G M PL P + A+I A
Sbjct: 444 HDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPPHLTCAVIKA 502
Query: 506 GQFNCLEEMLITVA-MLSVESIFFR 529
+C E++L+ +A MLSVE++F R
Sbjct: 503 ASLDC-EDLLLPIAAMLSVENVFIR 526
Score = 323 (118.8 bits), Expect = 3.5e-86, Sum P(2) = 3.5e-86
Identities = 71/153 (46%), Positives = 93/153 (60%)
Query: 40 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 99
+ PI K+L++ VR N LI+ G TGSGKTTQLP++L+ AGF + G +IGVTQP
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVA 110
Query: 100 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKE----ALL-----DPYLSRYSAI 150
EE LG +VGY +RFDD +S T IK LL DP L+++S I
Sbjct: 111 AISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVI 170
Query: 151 IVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 183
I+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 203
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 558 (201.5 bits), Expect = 3.5e-86, Sum P(2) = 3.5e-86
Identities = 130/325 (40%), Positives = 202/325 (62%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----YLDATLITI 273
LK+++MSA+++ S +FG + GR +PV E L D Y+ A +
Sbjct: 204 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 263
Query: 274 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 326
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 264 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 323
Query: 327 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 386
++QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK ++P G++ L VV
Sbjct: 324 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 383
Query: 387 PISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGV 445
PISK++ALQRSGRAGR GKCFR+Y ++ +++ + D PEIKR +L++V+L LK L +
Sbjct: 384 PISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAI 443
Query: 446 DDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVA 505
D+I F +++ P+ I+++L+QL+ A+ ++ +G M PL P + A+I A
Sbjct: 444 HDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPPHLTCAVIKA 502
Query: 506 GQFNCLEEMLITVA-MLSVESIFFR 529
+C E++L+ +A MLSVE++F R
Sbjct: 503 ASLDC-EDLLLPIAAMLSVENVFIR 526
Score = 323 (118.8 bits), Expect = 3.5e-86, Sum P(2) = 3.5e-86
Identities = 71/153 (46%), Positives = 93/153 (60%)
Query: 40 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 99
+ PI K+L++ VR N LI+ G TGSGKTTQLP++L+ AGF + G +IGVTQP
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVA 110
Query: 100 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKE----ALL-----DPYLSRYSAI 150
EE LG +VGY +RFDD +S T IK LL DP L+++S I
Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVI 170
Query: 151 IVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 183
I+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 203
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 555 (200.4 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 130/325 (40%), Positives = 200/325 (61%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----YLDATLITI 273
LK+++MSA+++ S +FG + GR +PV E L D Y+ A +
Sbjct: 204 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 263
Query: 274 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 326
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 264 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 323
Query: 327 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 386
++QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK ++P G++ L VV
Sbjct: 324 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 383
Query: 387 PISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGV 445
PISK++ALQRSGRAGR GKCFR+Y + + + + D PEIKR +L++V+L LK L +
Sbjct: 384 PISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAI 443
Query: 446 DDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVA 505
D+I F +++ P+ I+++L+QL+ A+ ++ +G M PL P + A+I A
Sbjct: 444 HDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPPHLTCAVIRA 502
Query: 506 GQFNCLEEMLITVA-MLSVESIFFR 529
+C E++L+ +A MLSVE++F R
Sbjct: 503 ASLDC-EDLLLPIAAMLSVENVFIR 526
Score = 325 (119.5 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 72/153 (47%), Positives = 93/153 (60%)
Query: 40 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 99
+ PI K+L++ VR N LI+ G TGSGKTTQLP++L+ AGF + G +IGVTQP
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVA 110
Query: 100 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKE----ALL-----DPYLSRYSAI 150
EE LG +VGY +RFDD +S T IK LL DP LS++S I
Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVI 170
Query: 151 IVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 183
I+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQDKSPNRKEH 203
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 610 (219.8 bits), Expect = 4.6e-86, Sum P(3) = 4.6e-86
Identities = 139/342 (40%), Positives = 205/342 (59%)
Query: 214 GRKFAPLKLIIMSASLDARGFSEYFGC------AKA---------VHVQGRQFPVEILYT 258
GR PLK++ MSA+ + +F AKA + ++GRQFPVEI+++
Sbjct: 295 GRGGLPLKVVAMSATANIETLENFFSIPQDDRKAKAESDGKAEQTLKIEGRQFPVEIIHS 354
Query: 259 LYPEPDYLDATLITIFQVHLDEA-PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLV 317
P P D + T+F++H E PGDILVFL GQE IE ++RL++E L K+
Sbjct: 355 PKPVPVLADEVVKTVFKIHCGEPLPGDILVFLYGQEPIEEIQRLIEEYAATLASDVPKIK 414
Query: 318 TVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPV 377
+P+F L E Q F P RKV+LATNIAETSVT+PG++YVID G K + Y
Sbjct: 415 ALPLFGQLSMEAQHTAFRPLKGRVRKVVLATNIAETSVTVPGVRYVIDTGKSKMKQYRAS 474
Query: 378 KGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVI 437
G+ESLLV ISK+ A+QR+GRAGRE PGKC+RLY E+ + ++ D+ PEI R N+
Sbjct: 475 LGLESLLVDAISKSSAIQRAGRAGREAPGKCYRLYTEDVYKEMRDADLPEILRNNVREAA 534
Query: 438 LQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPI 497
L + A GVDD++ F M+ P + + K++ QL +LGA+ D+ +++ +G +MARLP+
Sbjct: 535 LIMMARGVDDLLTFPLMDTPKISRMEKAMVQLNILGAIDDEGAITE-LGKKMARLPVAAP 593
Query: 498 YSKALIVAGQ--FNCLEEMLITVAMLSV-ESIFFRSPGEVRR 536
+ L+ A ++CL E++ ++ +S + IF + E R
Sbjct: 594 LGRVLLAAASPAYDCLLEVIDIISCISGGDDIFHQLQSEEAR 635
Score = 151 (58.2 bits), Expect = 4.6e-86, Sum P(3) = 4.6e-86
Identities = 32/62 (51%), Positives = 45/62 (72%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
+L RK+LPI + + E +RKND+LI+VGETGSGK+TQ+PQFL +CR ++I +T
Sbjct: 110 LLPLRKALPIWQHQGAIREHLRKNDVLILVGETGSGKSTQVPQFLADEEWCRPRQVI-MT 168
Query: 94 QP 95
P
Sbjct: 169 LP 170
Score = 132 (51.5 bits), Expect = 4.6e-86, Sum P(3) = 4.6e-86
Identities = 31/73 (42%), Positives = 41/73 (56%)
Query: 119 VGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLL 169
VGYS+RFD T+IK E L DP L +YSA++VDE HER + D+L G L
Sbjct: 225 VGYSVRFDHNVPKGTKIKFLTEGMLLQELLHDPSLRQYSAVVVDEVHERGIDVDLLCGFL 284
Query: 170 KKVQNARSKSADG 182
K++ + K G
Sbjct: 285 KQMLLSPDKPGRG 297
Score = 60 (26.2 bits), Expect = 1.7e-78, Sum P(3) = 1.7e-78
Identities = 20/63 (31%), Positives = 25/63 (39%)
Query: 87 GKLIGVTQPXXXXXXXXXXXXXEESGVEL------GQR-------VGYSIRFDDRTSTST 133
G +I VTQP E+G L G + VGYS+RFD T
Sbjct: 180 GGMIAVTQPRRVAATTLAHRVAREAGTPLQPSGTSGAKPGAAEGLVGYSVRFDHNVPKGT 239
Query: 134 RIK 136
+IK
Sbjct: 240 KIK 242
Score = 40 (19.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 17/74 (22%), Positives = 35/74 (47%)
Query: 446 DDIIGFD--FMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALI 503
+ ++G+ F + + IK L + LL L L DP Q + + +D ++ + +
Sbjct: 222 EGLVGYSVRFDHNVPKGTKIKFLTEGMLLQEL-----LHDPSLRQYSAVVVDEVHERGID 276
Query: 504 VAGQFNCLEEMLIT 517
V L++ML++
Sbjct: 277 VDLLCGFLKQMLLS 290
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 558 (201.5 bits), Expect = 5.7e-86, Sum P(2) = 5.7e-86
Identities = 130/325 (40%), Positives = 202/325 (62%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----YLDATLITI 273
LK+++MSA+++ S +FG + GR +PV E L D Y+ A +
Sbjct: 204 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 263
Query: 274 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 326
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 264 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 323
Query: 327 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 386
++QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK ++P G++ L VV
Sbjct: 324 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 383
Query: 387 PISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGV 445
PISK++ALQRSGRAGR GKCFR+Y ++ +++ + D PEIKR +L++V+L LK L +
Sbjct: 384 PISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAI 443
Query: 446 DDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVA 505
D+I F +++ P+ I+++L+QL+ A+ ++ +G M PL P + A+I A
Sbjct: 444 HDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPPHLTCAVIKA 502
Query: 506 GQFNCLEEMLITVA-MLSVESIFFR 529
+C E++L+ +A MLSVE++F R
Sbjct: 503 ASLDC-EDLLLPIAAMLSVENVFIR 526
Score = 321 (118.1 bits), Expect = 5.7e-86, Sum P(2) = 5.7e-86
Identities = 70/153 (45%), Positives = 93/153 (60%)
Query: 40 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 99
+ PI K++++ VR N LI+ G TGSGKTTQLP++L+ AGF + G +IGVTQP
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVA 110
Query: 100 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKE----ALL-----DPYLSRYSAI 150
EE LG +VGY +RFDD +S T IK LL DP L+++S I
Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVI 170
Query: 151 IVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 183
I+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 203
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 557 (201.1 bits), Expect = 5.7e-86, Sum P(2) = 5.7e-86
Identities = 130/325 (40%), Positives = 202/325 (62%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----YLDATLITI 273
LK+++MSA+++ S +FG + GR +PV E L D Y+ A +
Sbjct: 204 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 263
Query: 274 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 326
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 264 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 323
Query: 327 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 386
++QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK ++P G++ L VV
Sbjct: 324 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 383
Query: 387 PISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGV 445
PISK++ALQRSGRAGR GKCFR+Y ++ +++ + D PEIKR +L++V+L LK L +
Sbjct: 384 PISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAI 443
Query: 446 DDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVA 505
D+I F +++ P+ I+++L+QL+ A+ ++ +G M PL P + A+I A
Sbjct: 444 HDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPPHLTCAVIRA 502
Query: 506 GQFNCLEEMLITVA-MLSVESIFFR 529
+C E++L+ +A MLSVE++F R
Sbjct: 503 ASLDC-EDLLLPIAAMLSVENVFIR 526
Score = 322 (118.4 bits), Expect = 5.7e-86, Sum P(2) = 5.7e-86
Identities = 71/153 (46%), Positives = 93/153 (60%)
Query: 40 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 99
+ PI K+L++ VR N LI+ G TGSGKTTQLP++L+ AGF + G +IGVTQP
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVA 110
Query: 100 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKE----ALL-----DPYLSRYSAI 150
EE LG +VGY +RFDD +S T IK LL DP L+++S I
Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVI 170
Query: 151 IVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 183
I+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQDKSPNRKEH 203
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 558 (201.5 bits), Expect = 3.1e-85, Sum P(2) = 3.1e-85
Identities = 130/325 (40%), Positives = 202/325 (62%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----YLDATLITI 273
LK+++MSA+++ S +FG + GR +PV E L D Y+ A +
Sbjct: 282 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 341
Query: 274 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 326
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 342 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 401
Query: 327 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 386
++QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK ++P G++ L VV
Sbjct: 402 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 461
Query: 387 PISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGV 445
PISK++ALQRSGRAGR GKCFR+Y ++ +++ + D PEIKR +L++V+L LK L +
Sbjct: 462 PISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAI 521
Query: 446 DDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVA 505
D+I F +++ P+ I+++L+QL+ A+ ++ +G M PL P + A+I A
Sbjct: 522 HDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPPHLTCAVIKA 580
Query: 506 GQFNCLEEMLITVA-MLSVESIFFR 529
+C E++L+ +A MLSVE++F R
Sbjct: 581 ASLDC-EDLLLPIAAMLSVENVFIR 604
Score = 323 (118.8 bits), Expect = 3.1e-85, Sum P(2) = 3.1e-85
Identities = 71/153 (46%), Positives = 93/153 (60%)
Query: 40 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 99
+ PI K+L++ VR N LI+ G TGSGKTTQLP++L+ AGF + G +IGVTQP
Sbjct: 130 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVA 188
Query: 100 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKE----ALL-----DPYLSRYSAI 150
EE LG +VGY +RFDD +S T IK LL DP L+++S I
Sbjct: 189 AISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVI 248
Query: 151 IVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 183
I+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 249 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 281
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 578 (208.5 bits), Expect = 8.8e-85, Sum P(2) = 8.8e-85
Identities = 137/334 (41%), Positives = 194/334 (58%)
Query: 209 LKQCQGRKFA---PLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYT------L 259
L+QCQ ++ PL+LIIMSA+L A F YF AK V V GR FP+E+ +
Sbjct: 297 LRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLVAGRTFPIEVFHVNPKINKS 356
Query: 260 YPEPDYLDATLITIFQVHLDEAPG-DILVFLTGQEEIESVERLVQERLLQLPEASRKLVT 318
+ DY+ +I + VHL E G DILVFLTG EEIE+V + E LP ++ L+
Sbjct: 357 FSSTDYVYNAVICVKYVHLTEPKGRDILVFLTGSEEIEAVASQLAELNGSLPASADVLMP 416
Query: 319 VPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVK 378
VP++++L E+Q F G RKVI++TNIAETSVTIPGI+ VID G VK + ++
Sbjct: 417 VPLYAALRPEKQKEAFRKTPQGARKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFN 476
Query: 379 GMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVIL 438
++ L V +SKAQA QR+GRAGR+ PGKC+RLY +F K E PEI RCNLS L
Sbjct: 477 RIDVLKVHNVSKAQAKQRAGRAGRDAPGKCYRLYSREDFHKFEAENMPEILRCNLSATFL 536
Query: 439 QLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGAL----TDDCKLS-DPVGHQMARLP 493
+L LG+ + ++ P +I +L +L LGA+ +D K + +G P
Sbjct: 537 ELMKLGMKNPHRLKLIDPPETDNINAALLELTSLGAIRPVNSDRSKFALTEMGDAFCMYP 596
Query: 494 LDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 527
L P +++ L A + C+ E + VA + +++F
Sbjct: 597 LPPDHARILFQAQKEGCIMEAIKIVAAMQTDALF 630
Score = 296 (109.3 bits), Expect = 8.8e-85, Sum P(2) = 8.8e-85
Identities = 69/189 (36%), Positives = 105/189 (55%)
Query: 2 PSVAEGEVSNST--HNPKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDI 59
PS ++ ST H+ S P F + +K R LPI +VE++L+ E+ +
Sbjct: 125 PSNSKNATPMSTRKHSSSQQSPPHFE---ANYEKF--SRPQLPIDAVEQQLMYELASQET 179
Query: 60 LIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRV 119
LI++GETGSGK+TQ+PQ AG G I VTQP E G +G V
Sbjct: 180 LIVIGETGSGKSTQVPQLCVRAGIANSGS-IAVTQPRRVAAISLASRVATEMGTNIGGIV 238
Query: 120 GYSIRFDDRTSTSTRI---------KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLK 170
GY +RF++ T T+I ++AL+ P L +YS +I+DEAHER++H+DVL+ +L+
Sbjct: 239 GYHVRFENATCHKTKIEYMTDGIVLRKALVSPLLDKYSCVIIDEAHERSLHSDVLMCILR 298
Query: 171 KVQNARSKS 179
+ Q+ R ++
Sbjct: 299 QCQDQRRET 307
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 447 (162.4 bits), Expect = 2.5e-81, Sum P(3) = 2.5e-81
Identities = 95/236 (40%), Positives = 148/236 (62%)
Query: 293 EEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAE 352
+E E E ++E + ++ +P++S LP+++Q+RVF P G R V+LATN+AE
Sbjct: 654 DENEEEEFKIEEE--EAGTGPSRMHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNVAE 711
Query: 353 TSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLY 412
TS+TIPGI+YV D G K R YD + G++S V ISKA A QR GRAGR GPG C+RLY
Sbjct: 712 TSLTIPGIRYVFDSGRSKERKYDQLTGVQSFEVGWISKASANQREGRAGRTGPGHCWRLY 771
Query: 413 PENEFDK-LEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFL 471
+++ L++ PE+ R +L V+LQLK++ + ++ F F P R S++KS + L
Sbjct: 772 SSAVYERDLDEFALPELLRTSLEGVVLQLKSMNLQHVVNFPFPTPPERDSLVKSEKLLKY 831
Query: 472 LGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 527
+ A++++ +++ VG+ M+ PL P +S+ L++ Q +CL + VA LS IF
Sbjct: 832 ISAVSEEGRVTQ-VGYTMSIFPLSPRFSRILLLGHQHDCLHYTVTLVAALSAAEIF 886
Score = 306 (112.8 bits), Expect = 2.5e-81, Sum P(3) = 2.5e-81
Identities = 68/170 (40%), Positives = 102/170 (60%)
Query: 24 FNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGF 83
F+ + +R +I R +LP+ S E+R++E + N+I+++ G TGSGKTTQ+PQFLF AG+
Sbjct: 340 FHVAVTRSPEIQSARLALPVVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQFLFEAGY 399
Query: 84 -CRDGK---LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK--- 136
D +IG+TQP EE G + Q+VGY IRF+ + T +K
Sbjct: 400 GSPDSPTPGMIGITQPRRVAAVSMSKRVAEELG-DHSQKVGYQIRFEGTVNKDTAVKFMT 458
Query: 137 ------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSA 180
E D L +YSAI+VDEAHER+V+TD+L+G+L ++ R++ A
Sbjct: 459 DGVLLREVAQDLALRKYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMA 508
Score = 130 (50.8 bits), Expect = 2.5e-81, Sum P(3) = 2.5e-81
Identities = 33/86 (38%), Positives = 46/86 (53%)
Query: 219 PLKLIIMSASLDARGFSE---YFGCAKAV-HVQGRQFPVEILYTLYPEPDYLDATLITIF 274
PLKL+IMSA+L +E F V V+GRQ+PV + + DY++ I
Sbjct: 516 PLKLVIMSATLRIEDLTENKNLFATPPPVLEVEGRQYPVTLHFARKTHHDYVEEAFRKIS 575
Query: 275 QVHLDEAPGDILVFLTGQEEIESVER 300
+ H PG +LVFLTGQ EI + +
Sbjct: 576 RGHKKLPPGGMLVFLTGQNEITQLSK 601
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 202/541 (37%), Positives = 305/541 (56%)
Query: 10 SNSTHNPKLHSKPFFNDS----SSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGE 65
+N++ K S F ND+ S+++ I QQR SLPI K ++ + K L+I+G
Sbjct: 20 NNNSLFDKDSSLSFGNDNFIYNSNQKLTIQQQRISLPIYQNRKHILYLLEKYSTLVIIGN 79
Query: 66 TGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVE-LGQRVGYSIR 124
TG GK+TQ+PQ+LF +G+ + I TQP +E G + +G+ VGYS+R
Sbjct: 80 TGCGKSTQIPQYLFESGWSDGFRTILCTQPRRVAAISLAERVAQEMGEQHVGKTVGYSVR 139
Query: 125 FDDRTST-STRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQN 174
FD++ S TRIK E +LDP L +YS I++DEAHER++ TD+L+GLLKKVQ
Sbjct: 140 FDEKISDIETRIKYVTDGMLIREMMLDPLLLKYSVIMIDEAHERSLQTDLLMGLLKKVQK 199
Query: 175 ARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGF 234
R+ + + ++ ND Q K I+ S++ R +
Sbjct: 200 KRNSTNNNNNNDNSLKLIISSATLNANDFFNFFNYNQTND-KSKDTSTIL---SIEGRTY 255
Query: 235 S---EYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTG 291
Y + + ++Q + ++T P D L +F +E + L+ T
Sbjct: 256 PVDIHYLEESTSNYIQTTIQTIIDIHTTQPPGDIL------VFLTGQEEI--EKLI-QTL 306
Query: 292 QEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAG--FRKVILATN 349
++ E + + Q+ Q + K +P++S L +Q++VF RK+I++TN
Sbjct: 307 DDKFEILRQYHQQHHHQQQQPFMKYSLLPMYSGLSINKQIKVFESVGDSKKIRKIIISTN 366
Query: 350 IAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCF 409
IAETS+TI G+ YV+D GFVK + YD G+ESL++VP SK+ A QR+GRAGR GKC+
Sbjct: 367 IAETSITIDGVVYVVDCGFVKIKSYDSESGLESLVIVPTSKSSANQRAGRAGRSRAGKCY 426
Query: 410 RLYPENEFDKL-EDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQ 468
RLY E ++KL D T PEI+R NL+N ILQLKALG+D+I+ FDF+ +P +S+I+ LE
Sbjct: 427 RLYTELTYEKLLPDQTIPEIQRSNLTNTILQLKALGIDNILNFDFISQPPSSSLIRGLEV 486
Query: 469 LFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQ--FNCLEEMLITVAMLSVESI 526
L+ LGAL D+ KL++P G MA P DP +SK +I + FNC +E + AML+++ +
Sbjct: 487 LYGLGALDDNGKLTNPTGMIMAEFPTDPTFSKMIIQSSSNGFNCSDECITITAMLNIQGL 546
Query: 527 F 527
F
Sbjct: 547 F 547
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 424 (154.3 bits), Expect = 1.2e-80, Sum P(3) = 1.2e-80
Identities = 93/239 (38%), Positives = 141/239 (58%)
Query: 292 QEEIESVERLV--QERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATN 349
Q E E ++++ + + S + +P++S L +E QM+VF + G R I+ATN
Sbjct: 676 QSETEDIDQVPTSSSSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATN 735
Query: 350 IAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCF 409
+AETS+TIP I+YV+D G K R+Y+ ++ V ISKA A QR+GRAGR GPG C+
Sbjct: 736 VAETSITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCY 795
Query: 410 RLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQ 468
RLY FD + PEI R + +++LQ+K + +D+I F F P R+ + KSL+
Sbjct: 796 RLYSSAVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKL 855
Query: 469 LFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 527
L LGA+ + L+ +G QM+ PL P +SK LI+ Q CL ++ V+ LS+ +F
Sbjct: 856 LSNLGAIDSEGVLTK-LGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQLF 913
Score = 293 (108.2 bits), Expect = 1.2e-80, Sum P(3) = 1.2e-80
Identities = 69/161 (42%), Positives = 95/161 (59%)
Query: 29 SRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFC---- 84
+R +I + R +LPI + E+R++E++ ND++II G TGSGKTTQLPQFLF AGF
Sbjct: 386 NRPPEIQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPES 445
Query: 85 RDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL- 140
+ +I +TQP EE +V Y IRFD + T IK + +L
Sbjct: 446 ENPGMIAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILL 504
Query: 141 -----DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
D L+ YSA+IVDEAHER+V+TD+LLGLL ++ R
Sbjct: 505 RELSSDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLR 545
Score = 160 (61.4 bits), Expect = 1.2e-80, Sum P(3) = 1.2e-80
Identities = 41/111 (36%), Positives = 61/111 (54%)
Query: 215 RKFAPLKLIIMSASLDARGFSE---YFGCAKAV-HVQGRQFPVEILYTLYPEPDYLDATL 270
+K PLKLIIMSA+L FSE F + + RQ+PV I + +PDYL
Sbjct: 553 QKVKPLKLIIMSATLRVTDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAF 612
Query: 271 ITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQL--PEASRKLVTV 319
+ +H G ILVFLTGQ+E+E + +++++R ++ P SR + V
Sbjct: 613 DKVCLIHKRLPAGSILVFLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVV 663
Score = 46 (21.3 bits), Expect = 9.3e-55, Sum P(3) = 9.3e-55
Identities = 10/53 (18%), Positives = 28/53 (52%)
Query: 31 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGF 83
++ +L+++ LP++ + RL + V D+ ++ + +T ++ +GF
Sbjct: 139 KKSLLEEKLGLPLSDADSRLYKVV---DVETTTTKSSTAETNAPEKYSTRSGF 188
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 429 (156.1 bits), Expect = 7.2e-78, Sum P(2) = 7.2e-78
Identities = 92/228 (40%), Positives = 137/228 (60%)
Query: 316 LVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYD 375
L +P++S+LP+ +QMRVF G R V++ATN+AETS+TIP IKYV+D G VK R Y+
Sbjct: 846 LFVLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLAETSLTIPNIKYVVDTGRVKQRYYN 905
Query: 376 PVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLS 434
G+ S V SKA A QR+GRAGR GPG C+R+Y F D + +KPEI +
Sbjct: 906 KDNGISSFEVGWTSKASADQRAGRAGRTGPGHCYRIYSSAVFNDHFQQFSKPEILMIPID 965
Query: 435 NVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPL 494
+ILQ+K++G+ I GF F P +S+ +L L LGAL +G +M++ P+
Sbjct: 966 GMILQMKSMGIQKITGFPFPTPPDESSLKLALRTLINLGALEVKTFSITELGMKMSQFPV 1025
Query: 495 DPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNE 542
P +SK L++ + NCL ++ V++L+V+ F + E + N+
Sbjct: 1026 SPRHSKMLLLGQEHNCLPYIIAIVSILTVKDPFLKEAYEANQNNDEND 1073
Score = 400 (145.9 bits), Expect = 7.2e-78, Sum P(2) = 7.2e-78
Identities = 105/293 (35%), Positives = 158/293 (53%)
Query: 24 FNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGF 83
FN R+ +I R +LPI E +VE+++ ND++II GETGSGKTTQ+PQFL+ +GF
Sbjct: 388 FNVKVERKPEIDAVRDNLPIMLEEHSIVEKIKDNDVVIICGETGSGKTTQVPQFLYESGF 447
Query: 84 CR--DGK---LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTST-RIK- 136
G +IGVTQP EE VE G+ VGY IR+D + +S +IK
Sbjct: 448 GHRESGDFPGIIGVTQPRRVAAVSTAKRVAEELNVEFGKEVGYQIRYDKKLDSSVNKIKF 507
Query: 137 --------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSXXXX 188
E D LS+YS+I++DEAHER ++TD+L+GLL ++ R K
Sbjct: 508 MTDGILMREVQTDFLLSQYSSILIDEAHERNLNTDILIGLLSRIVPLRKK---------- 557
Query: 189 XXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSE----YFGCAKAV 244
+ ++ N T G++ + PLKL++MSA+L F++ + +
Sbjct: 558 -LYLKSLATNKANGTIGVDMIY--------PLKLVVMSATLRVEDFTKNKTLFSRPPPVI 608
Query: 245 HVQGRQFPVEILYTLYPE-PDYLDATLITIFQVHLDEAPGDILVFLTGQEEIE 296
++ RQFPV I + E +Y+D + ++H + G ILVF+TG++EIE
Sbjct: 609 NIPTRQFPVTIHFNKKTELVNYIDECYKKVVKIHKNLPSGGILVFVTGKQEIE 661
Score = 42 (19.8 bits), Expect = 3.4e-40, Sum P(2) = 3.4e-40
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 25 NDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVG 64
N S + +++L+ S+ K +E +K L +VG
Sbjct: 46 NSMSEKNRELLKTSASIGSKETNKASIERQKKEAELNVVG 85
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 458 (166.3 bits), Expect = 1.5e-76, Sum P(5) = 1.5e-76
Identities = 91/219 (41%), Positives = 144/219 (65%)
Query: 309 LPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGF 368
+P+ + + ++SSLP+++Q +F P RKVIL+TNIAETSVTIP IKYVID G
Sbjct: 393 MPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGK 452
Query: 369 VKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEI 428
VK + +D +G L V ISK A+QRSGRAGRE PG+ +R+Y + E++ + PEI
Sbjct: 453 VKIKYFDVNRGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFLIPEI 512
Query: 429 KRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQ 488
R +L+ + L+LKA+ +++ + F+F E P + + S + LF + A+ + L+D +G +
Sbjct: 513 FRSDLTQIYLELKAMNINNPLEFNFPENPRKELFVHSAKMLFKINAIDMNNNLTD-LGKK 571
Query: 489 MARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 527
+ PL+PIY+ L+ + +FNC++E+ VA+L+ +SIF
Sbjct: 572 LCLFPLNPIYANILLCSIEFNCIDEIATIVALLNCDSIF 610
Score = 136 (52.9 bits), Expect = 1.5e-76, Sum P(5) = 1.5e-76
Identities = 32/74 (43%), Positives = 43/74 (58%)
Query: 114 ELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDV 164
++G VGY+IRF + S TRIK E + DP L +Y +I+DE HER++ TDV
Sbjct: 97 DIGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLLKKYKFLILDEIHERSIRTDV 156
Query: 165 LLGLLKKVQNARSK 178
LLG K + R K
Sbjct: 157 LLGYTKILLQKRKK 170
Score = 102 (41.0 bits), Expect = 1.5e-76, Sum P(5) = 1.5e-76
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 39 KSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFL 78
+ LPI + + + ++KN+++II GETG GKTTQ+PQ +
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQII 41
Score = 83 (34.3 bits), Expect = 1.5e-76, Sum P(5) = 1.5e-76
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 279 DEAPGDILVFLTGQEEIESVERLVQERL 306
D++ GDILVFL GQEEIE V +++E+L
Sbjct: 313 DKSLGDILVFLPGQEEIEMVNIMLKEKL 340
Score = 79 (32.9 bits), Expect = 1.5e-76, Sum P(5) = 1.5e-76
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+K +K+I+MSA+ D F+++F + + + + I Y DY+ + + TI
Sbjct: 166 QKRKKIKIILMSATFDINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYILSVVSTIL 225
Query: 275 QVH 277
Q+H
Sbjct: 226 QIH 228
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 458 (166.3 bits), Expect = 1.5e-76, Sum P(5) = 1.5e-76
Identities = 91/219 (41%), Positives = 144/219 (65%)
Query: 309 LPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGF 368
+P+ + + ++SSLP+++Q +F P RKVIL+TNIAETSVTIP IKYVID G
Sbjct: 393 MPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGK 452
Query: 369 VKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEI 428
VK + +D +G L V ISK A+QRSGRAGRE PG+ +R+Y + E++ + PEI
Sbjct: 453 VKIKYFDVNRGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFLIPEI 512
Query: 429 KRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQ 488
R +L+ + L+LKA+ +++ + F+F E P + + S + LF + A+ + L+D +G +
Sbjct: 513 FRSDLTQIYLELKAMNINNPLEFNFPENPRKELFVHSAKMLFKINAIDMNNNLTD-LGKK 571
Query: 489 MARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 527
+ PL+PIY+ L+ + +FNC++E+ VA+L+ +SIF
Sbjct: 572 LCLFPLNPIYANILLCSIEFNCIDEIATIVALLNCDSIF 610
Score = 136 (52.9 bits), Expect = 1.5e-76, Sum P(5) = 1.5e-76
Identities = 32/74 (43%), Positives = 43/74 (58%)
Query: 114 ELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDV 164
++G VGY+IRF + S TRIK E + DP L +Y +I+DE HER++ TDV
Sbjct: 97 DIGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLLKKYKFLILDEIHERSIRTDV 156
Query: 165 LLGLLKKVQNARSK 178
LLG K + R K
Sbjct: 157 LLGYTKILLQKRKK 170
Score = 102 (41.0 bits), Expect = 1.5e-76, Sum P(5) = 1.5e-76
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 39 KSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFL 78
+ LPI + + + ++KN+++II GETG GKTTQ+PQ +
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQII 41
Score = 83 (34.3 bits), Expect = 1.5e-76, Sum P(5) = 1.5e-76
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 279 DEAPGDILVFLTGQEEIESVERLVQERL 306
D++ GDILVFL GQEEIE V +++E+L
Sbjct: 313 DKSLGDILVFLPGQEEIEMVNIMLKEKL 340
Score = 79 (32.9 bits), Expect = 1.5e-76, Sum P(5) = 1.5e-76
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+K +K+I+MSA+ D F+++F + + + + I Y DY+ + + TI
Sbjct: 166 QKRKKIKIILMSATFDINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYILSVVSTIL 225
Query: 275 QVH 277
Q+H
Sbjct: 226 QIH 228
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 419 (152.6 bits), Expect = 5.7e-76, Sum P(3) = 5.7e-76
Identities = 99/232 (42%), Positives = 135/232 (58%)
Query: 310 PEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFV 369
P+AS L +P++S L E+Q +VF P G R ++ATN+AETS+TIPGIKYV+D G V
Sbjct: 576 PDASLPLHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKV 635
Query: 370 KARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIK 429
K R YD V G+ S V +S+A A QR+GRAGR PG C+RLY F E PEI
Sbjct: 636 KKRHYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFSDFEQFPPPEIT 695
Query: 430 RCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGAL-----TDDCK---- 480
R + ++ILQ+KAL ++ +I F F PS ++I + E L LGAL T+ K
Sbjct: 696 RRPVEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPQKTESVKQLQR 755
Query: 481 --LSDPV---GHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 527
L P+ G MA P+ P Y+K L ++ Q CL + VA ++V +F
Sbjct: 756 SWLGCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVAAMTVRELF 807
Score = 295 (108.9 bits), Expect = 5.7e-76, Sum P(3) = 5.7e-76
Identities = 63/160 (39%), Positives = 100/160 (62%)
Query: 29 SRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK 88
+R ++ ++R LPI + E+ ++E V ++ I+I+ GETGSGKTTQ+PQFL+ AG+ D
Sbjct: 234 NRTPEMQEERLKLPILAEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSDNS 293
Query: 89 LIGVTQPXXXXXXXXXXXXXEESGVELGQRV-GYSIRFDDRTSTSTRIK---EALL---- 140
+IG+T+P +E + L QRV Y IR++ + TRIK + +L
Sbjct: 294 IIGITEPRRVAAVAMSQRVAKE--MNLSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEI 351
Query: 141 --DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 178
D L RY +++DEAHER+V+TD+L+GLL ++ + R+K
Sbjct: 352 QKDFLLLRYKVVLIDEAHERSVYTDILIGLLSRIVSLRAK 391
Score = 118 (46.6 bits), Expect = 5.7e-76, Sum P(3) = 5.7e-76
Identities = 31/100 (31%), Positives = 52/100 (52%)
Query: 206 INTLKQCQGRKFAPLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFPVEILYTLY- 260
++ + + ++ PLKL+IMSA+L F++ + + V+ RQFPV + +
Sbjct: 382 LSRIVSLRAKRHLPLKLLIMSATLRVEDFTQNQRLFPQPPPVIKVESRQFPVTVHFNKRT 441
Query: 261 PEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVER 300
P DY + ++H G ILVFLTGQ E+ ++ R
Sbjct: 442 PLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVHALCR 481
Score = 50 (22.7 bits), Expect = 8.0e-31, Sum P(3) = 8.0e-31
Identities = 38/113 (33%), Positives = 53/113 (46%)
Query: 416 EFDK-LEDSTK---PEIKR--CNLSNVILQ----LKALGVDDIIGFDFMEKPSRASIIKS 465
+FDK LE+ PE R C+ ++V + L A+ VD G D + +R +++
Sbjct: 1007 QFDKPLEEPPPVYCPEKGRVLCHRASVFYRVGWPLPAVQVDFPEGIDCYKHFARF-LLEG 1065
Query: 466 LEQLFLLGALTDDCKLSDP--VGHQMARL-PLDPIYSKALIVAGQFNCLEEML 515
Q+F A C LS P + ARL P KAL VA Q NC E +L
Sbjct: 1066 --QVFQKLASYRGCLLSSPSTMLKTWARLQPRTESLLKAL-VAEQANCREALL 1115
Score = 37 (18.1 bits), Expect = 5.8e-49, Sum P(3) = 5.8e-49
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 17 KLHSKPFFNDSSSRRQKILQQR-KSLPIASVEKRLVE 52
K KP QKIL+Q+ K A + ++L E
Sbjct: 66 KKEKKPLTKKERKMLQKILEQKEKKSQRAEMLQKLSE 102
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 407 (148.3 bits), Expect = 9.8e-76, Sum P(3) = 9.8e-76
Identities = 93/231 (40%), Positives = 134/231 (58%)
Query: 311 EASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVK 370
++S L +P++S L E+Q +VF P G R ++ATN+AETS+TIPGIKYV+D G VK
Sbjct: 572 DSSLPLYVLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVK 631
Query: 371 ARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKR 430
R YD + G+ S V IS+A A QR+GRAGR PG C+RLY F E + PEI +
Sbjct: 632 KRFYDKITGVSSFRVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFMDFEKFSAPEITK 691
Query: 431 CNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDD-----------C 479
+ ++ILQ+KAL ++ +I F F P ++ + E L LGAL +
Sbjct: 692 RPVEDLILQMKALNIEKVINFPFPTPPPTEALAAAEELLIALGALKEPPMTGRLKEQQAA 751
Query: 480 KLS---DPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 527
KLS P+G MA P+ P Y+K L ++ Q +CL + V+ ++V +F
Sbjct: 752 KLSCPISPLGRVMATFPVAPRYAKMLALSRQHDCLPYTITIVSAMTVRELF 802
Score = 288 (106.4 bits), Expect = 9.8e-76, Sum P(3) = 9.8e-76
Identities = 65/168 (38%), Positives = 96/168 (57%)
Query: 21 KPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH 80
KP R +I + R LPI + E+ ++E + +N I++I GETGSGKTTQ+PQFL+
Sbjct: 222 KPAVYVPVDRSPEIQEARLKLPILAEEQVIMEAINENPIVVICGETGSGKTTQVPQFLYE 281
Query: 81 AGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRV-GYSIRFDDRTSTSTRIK--- 136
AG+ +IG+T+P +E + L RV Y IR++ T+ T+IK
Sbjct: 282 AGYTSSNGIIGITEPRRVAAVSMSQRVAKE--MNLSHRVVSYQIRYEGNTTDETQIKFMT 339
Query: 137 ------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 178
E D LS+Y II+DEAHER+++TD+L+GLL ++ R K
Sbjct: 340 DGVLLKEVQKDFLLSKYKVIIIDEAHERSMYTDILIGLLSRIVPLREK 387
Score = 135 (52.6 bits), Expect = 9.8e-76, Sum P(3) = 9.8e-76
Identities = 36/95 (37%), Positives = 51/95 (53%)
Query: 215 RKFAPLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFPVEILYTLY-PEPDYLDAT 269
+K PLKLIIMSA+L F+E + G + V RQFPV + + P DY
Sbjct: 387 KKGLPLKLIIMSATLRVEDFTENTRLFAGTPPVLQVDARQFPVTVHFNKKTPLDDYSGEC 446
Query: 270 LITIFQVHLDEAPGDILVFLTGQEEIESVERLVQE 304
+ ++H G ILVFLTGQ E+ S+ R +++
Sbjct: 447 FRKVCKIHRMLPSGGILVFLTGQAEVHSLCRRLRK 481
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 419 (152.6 bits), Expect = 1.5e-75, Sum P(3) = 1.5e-75
Identities = 100/232 (43%), Positives = 136/232 (58%)
Query: 310 PEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFV 369
P+AS L +P++S L E+Q +VF P G R ++ATN+AETS+TIPGIKYV+D G V
Sbjct: 580 PDASLPLHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKV 639
Query: 370 KARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIK 429
K R YD V G+ S V +S+A A QR+GRAGR PG C+RLY F E PEI
Sbjct: 640 KKRHYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEKYPPPEIT 699
Query: 430 RCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGAL-----TDDCK---- 480
R + ++ILQ+KAL ++ +I F F PS ++I + E L LGAL T+ K
Sbjct: 700 RRPVEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKTERVKQLQR 759
Query: 481 --LSDPV---GHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 527
LS P+ G MA P+ P Y+K L ++ Q CL + VA ++V +F
Sbjct: 760 SRLSCPITELGRTMATFPVAPRYAKMLALSRQHGCLPYTITIVAAMTVRELF 811
Score = 291 (107.5 bits), Expect = 1.5e-75, Sum P(3) = 1.5e-75
Identities = 68/169 (40%), Positives = 100/169 (59%)
Query: 20 SKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLF 79
SKP +R ++ ++R LPI S E+ ++E V ++ I+II GETGSGKTTQ+PQFL+
Sbjct: 229 SKPAVFIPVNRSPEMQEERLKLPILSEEQVIMEAVAEHPIVIICGETGSGKTTQVPQFLY 288
Query: 80 HAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRV-GYSIRFDDRTSTSTRIK-- 136
AG+ D +IGVT+P +E + L RV Y IR++ + TRIK
Sbjct: 289 EAGYSSDNSVIGVTEPRRVAAVAMSQRVAKE--MNLSPRVVSYQIRYEGNVTEETRIKFM 346
Query: 137 -EALL------DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 178
+ +L D L +Y +I+DEAHER+V+TD+L+GLL ++ R K
Sbjct: 347 TDGVLLKEIQKDFLLLKYKVVIIDEAHERSVYTDILIGLLSRIVCLREK 395
Score = 118 (46.6 bits), Expect = 1.5e-75, Sum P(3) = 1.5e-75
Identities = 31/91 (34%), Positives = 48/91 (52%)
Query: 215 RKFAPLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFPVEILYTLY-PEPDYLDAT 269
++ PLKL+IMSA+L F++ + + V+ RQFPV + + P DY
Sbjct: 395 KRHLPLKLLIMSATLRVEDFTQNQRLFTQPPPVIKVESRQFPVTVHFNKRTPLEDYSGEC 454
Query: 270 LITIFQVHLDEAPGDILVFLTGQEEIESVER 300
+ ++H G ILVFLTGQ E+ ++ R
Sbjct: 455 FRKVCKIHRMLPAGGILVFLTGQAEVHALCR 485
Score = 42 (19.8 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 209 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCA 241
+K+ + A LKL + L A G EY GC+
Sbjct: 837 MKRIWAGQGASLKLGDLMVLLGAVGACEYAGCS 869
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 416 (151.5 bits), Expect = 2.0e-75, Sum P(3) = 2.0e-75
Identities = 98/232 (42%), Positives = 134/232 (57%)
Query: 310 PEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFV 369
P+AS L +P++S L E+Q +VF P G R ++ATN+AETS+TIPGIKYV+D G V
Sbjct: 575 PDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKV 634
Query: 370 KARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIK 429
K R YD V G+ S V +S+A A QR+GRAGR PG C+RLY F E PEI
Sbjct: 635 KKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEIT 694
Query: 430 RCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCK--------- 480
R + ++ILQ+KAL ++ +I F F PS ++I + E L LGAL K
Sbjct: 695 RRPVEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKQERMKKLQM 754
Query: 481 --LSDPV---GHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 527
LS P+ G M+ P+ P Y+K L ++ Q CL + VA ++V +F
Sbjct: 755 SQLSCPITALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAAMTVRELF 806
Score = 291 (107.5 bits), Expect = 2.0e-75, Sum P(3) = 2.0e-75
Identities = 70/184 (38%), Positives = 106/184 (57%)
Query: 5 AEGEVSNSTHNPKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVG 64
A E S P L +KP +R ++ ++R LPI + E+ ++E V ++ I+I+ G
Sbjct: 213 APPETPASAPPPAL-AKPAVFIPVNRTPEMQEERLKLPILAEEQAIMEAVAEHPIVIVCG 271
Query: 65 ETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRV-GYSI 123
ETGSGKTTQ+PQFL+ AG+ + +IGVT+P +E + L RV Y I
Sbjct: 272 ETGSGKTTQVPQFLYEAGYSSEDSIIGVTEPRRVAAVAMSQRVAKE--MNLSHRVVSYQI 329
Query: 124 RFDDRTSTSTRIK---EALL------DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQN 174
R++ + TRIK + +L D L +Y +I+DEAHER+V+TD+LLGLL ++
Sbjct: 330 RYEGNVTEETRIKFMTDGVLLKEIQKDFLLLKYKVVIIDEAHERSVYTDILLGLLSRIVA 389
Query: 175 ARSK 178
R+K
Sbjct: 390 LRAK 393
Score = 120 (47.3 bits), Expect = 2.0e-75, Sum P(3) = 2.0e-75
Identities = 31/97 (31%), Positives = 52/97 (53%)
Query: 213 QGRKFAPLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFPVEILYTLY-PEPDYLD 267
+ ++ PLKL+IMSA+L F++ + + V+ RQFPV + + P DY
Sbjct: 391 RAKRHLPLKLLIMSATLRVEDFTQNQRLFTTPPPVIKVESRQFPVTVHFNKRTPLDDYSG 450
Query: 268 ATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQE 304
+ ++H G ILVFLTGQ E+ ++ R +++
Sbjct: 451 ECFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRLRK 487
Score = 44 (20.5 bits), Expect = 7.7e-22, Sum P(2) = 7.7e-22
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 199 RGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCA 241
+G T + +K+ + A LKL + L A G EY GC+
Sbjct: 823 KGRRTR-VAQMKRTWAGQGASLKLGDLMVLLGAVGACEYAGCS 864
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 740 (265.6 bits), Expect = 3.4e-74, Sum P(2) = 3.4e-74
Identities = 163/400 (40%), Positives = 248/400 (62%)
Query: 147 YSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGI 206
Y+ D E+T+ + G+L + ++ R D +S D +R +T+ +
Sbjct: 642 YAIRFEDCTSEKTMIKYMTDGILLR-ESLRESDLDHYSAVIM-----DEAHERSLNTDVL 695
Query: 207 -NTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDY 265
L++ R+ + LKLI+ SA++D+ F+ +FG H+ GR FPV+IL++ P+ DY
Sbjct: 696 FGLLREVVSRR-SDLKLIVTSATMDSDKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDY 754
Query: 266 LDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSL 325
++A + Q+HL GDIL+F+ GQE+IE + ERL L A L +PI+S L
Sbjct: 755 VEAAVKQALQIHLSGMVGDILIFMPGQEDIEVTSDQIVERLADLENAPA-LAVLPIYSQL 813
Query: 326 PSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLV 385
PS+ Q ++F A G RK I+ATNIAETS+T+ GI +V+D G+ K ++++P GM++L V
Sbjct: 814 PSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQV 873
Query: 386 VPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALG 444
PIS+A A QR+GRAGR GPG+C+RLY ++ F +++ +T PEI+R NL+NV+L LK+LG
Sbjct: 874 YPISQANANQRAGRAGRTGPGQCYRLYTQSAFKNEMLTTTIPEIQRTNLANVVLLLKSLG 933
Query: 445 VDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIV 504
V D++ F FM+ P +++ S+ QL++LGAL + L+ P G M PLDP SK LIV
Sbjct: 934 VQDLLLFHFMDPPPEDNMLNSMYQLWILGALDNTGALT-PTGRLMVEFPLDPALSKMLIV 992
Query: 505 AGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIF 544
+ +C ++LI V+MLSV SIF+R G + E F
Sbjct: 993 SCDMSCSADILIIVSMLSVPSIFYRPKGREEESDQVREKF 1032
Score = 328 (120.5 bits), Expect = 2.8e-26, P = 2.8e-26
Identities = 75/170 (44%), Positives = 107/170 (62%)
Query: 19 HSKPFFNDSS--SRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQ 76
H K SS ++++ +L+QR+ LPI +V ++L+ +R N+I+I+VGETGSGKTTQL Q
Sbjct: 539 HMKEKSEASSDFAKKKTLLEQRQYLPIFAVRQQLLNIIRDNNIVIVVGETGSGKTTQLTQ 598
Query: 77 FLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK 136
+L G+ G ++G TQP EE LG+ VGY+IRF+D TS T IK
Sbjct: 599 YLHEDGYTSYG-MVGCTQPRRVAAMSVAKRVSEEMNSNLGEEVGYAIRFEDCTSEKTMIK 657
Query: 137 ---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
E+L + L YSA+I+DEAHER+++TDVL GLL++V + RS
Sbjct: 658 YMTDGILLRESLRESDLDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRS 707
Score = 44 (20.5 bits), Expect = 3.4e-74, Sum P(2) = 3.4e-74
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 14 HNPKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEE 53
HNP S ++ +R++ILQ++ I S +KR + E
Sbjct: 366 HNPLTSSS---DEYVKKREQILQKQTQKRI-SAQKRQINE 401
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 449 (163.1 bits), Expect = 6.6e-74, Sum P(2) = 6.6e-74
Identities = 98/238 (41%), Positives = 149/238 (62%)
Query: 291 GQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNI 350
G++E + E +E L + A+ L +P++S LP+++QMRVF G R I+ATN+
Sbjct: 704 GEDEEDEEEEGFEEVLTEGQTANDPLYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNV 763
Query: 351 AETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFR 410
AETS+TIPG++YV+D G K R Y+ G++S V +SKA A QRSGRAGR GPG C+R
Sbjct: 764 AETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYR 823
Query: 411 LYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQL 469
LY F+ E +KPEI R + +++LQ+K++ + +II F F P R ++ K+++ L
Sbjct: 824 LYSSAVFEHDFEQFSKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQLL 883
Query: 470 FLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 527
LGAL D+ ++ G +M+ PL P +SK L+V+ + CL ++ V+ LSV F
Sbjct: 884 QYLGAL-DNKEMITEDGKKMSLFPLSPRFSKMLLVSDEKACLPYIVAIVSALSVGDPF 940
Score = 340 (124.7 bits), Expect = 6.6e-74, Sum P(2) = 6.6e-74
Identities = 101/299 (33%), Positives = 146/299 (48%)
Query: 21 KPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH 80
K F+ + S R +I + R LP+ E +++E + ND++II GETGSGKTTQ+PQFL+
Sbjct: 372 KAFYVEVS-RSDEIQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYE 430
Query: 81 AGF-CRDGK----LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI 135
AGF D ++G+TQP E G + G +VGY IRFD T++
Sbjct: 431 AGFGAEDSPDYPGMVGITQPRRVAAVSMAERVANELG-DHGHKVGYQIRFDSTAKEDTKV 489
Query: 136 K---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSXX 186
K E + D L++YS+II+DEAHER ++TD+L+G+L + R+K H
Sbjct: 490 KFMTDGVLLREMMHDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKL---HKEN 546
Query: 187 XXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 246
+I+ TL+ F+ K + A + V
Sbjct: 547 PIEHKKLKLIIMSA-------TLRVSD---FSENKTLFPIAP-------------PVLQV 583
Query: 247 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEI-ESVERLVQE 304
RQFPV I + +Y D ++H PG ILVFLTGQ+EI V+RL +E
Sbjct: 584 DARQFPVSIHFNRRTAFNYTDEAFRKTCKIHQKLPPGAILVFLTGQQEITHMVKRLRKE 642
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 538 (194.4 bits), Expect = 3.6e-73, Sum P(2) = 3.6e-73
Identities = 132/328 (40%), Positives = 191/328 (58%)
Query: 209 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDA 268
LKQ R+ LK+II SA++D FS++F A + V GR +PVE+ Y D ++
Sbjct: 223 LKQLLPRR-PDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSES 281
Query: 269 T---LITIFQV--HL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIF 322
L IFQ L DE GDIL+F+ G+ EI + +R L+ E VP++
Sbjct: 282 DRDQLEGIFQAVDELCDEGLGDILIFMNGEREIRDTADALSKRNLRDTEI------VPLY 335
Query: 323 SSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMES 382
+ L + +Q ++F P A R+++LATN+AETS+T+PGIKYVIDPG + Y ++
Sbjct: 336 ARLSAGEQNKIFQPHAG--RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQR 393
Query: 383 LLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKA 442
L + PIS+A A QR GR GR G C RLY E +F + T PEI R NL++VILQ+ A
Sbjct: 394 LPIEPISQASANQRKGRCGRTEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTA 453
Query: 443 LGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPV------GHQMARLPLDP 496
LG+ DI F F+E P + +I + L LGA+ D K DP G Q+ARLP+DP
Sbjct: 454 LGLGDIEAFPFVEAPDKRNIQDGVRLLEELGAINDQIK--DPKKRLTESGKQLARLPIDP 511
Query: 497 IYSKALIVAGQFNCLEEMLITVAMLSVE 524
++ ++ A + CL+E++I + LS++
Sbjct: 512 RLARMVLEASKLGCLKEVMIIASALSIQ 539
Score = 243 (90.6 bits), Expect = 3.6e-73, Sum P(2) = 3.6e-73
Identities = 57/154 (37%), Positives = 88/154 (57%)
Query: 30 RRQKI--LQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDG 87
R+Q++ ++ LP++ + + + + ++I+ GETGSGKTTQLP+ G + G
Sbjct: 74 RKQQMPKIEYPALLPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYG 133
Query: 88 KLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL---- 140
LIG TQP EE ELG VGY +RF D+ S T+IK + +L
Sbjct: 134 -LIGHTQPRRLAARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEI 192
Query: 141 --DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
D +L++Y II+DEAHER+++ D +LG LK++
Sbjct: 193 QNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQL 226
Score = 45 (20.9 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 249 RQFPVEILYTLYPEPDYLDATL--ITIFQVHLDEAPGDILVFLTG 291
+ P + P P+Y DA L +T F++ L +A L +TG
Sbjct: 919 KSLPKTLRKNFVPAPNYADAFLARVTPFEMPLLDAMEKELRRMTG 963
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 538 (194.4 bits), Expect = 3.6e-73, Sum P(2) = 3.6e-73
Identities = 132/328 (40%), Positives = 191/328 (58%)
Query: 209 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDA 268
LKQ R+ LK+II SA++D FS++F A + V GR +PVE+ Y D ++
Sbjct: 223 LKQLLPRR-PDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSES 281
Query: 269 T---LITIFQV--HL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIF 322
L IFQ L DE GDIL+F+ G+ EI + +R L+ E VP++
Sbjct: 282 DRDQLEGIFQAVDELCDEGLGDILIFMNGEREIRDTADALSKRNLRDTEI------VPLY 335
Query: 323 SSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMES 382
+ L + +Q ++F P A R+++LATN+AETS+T+PGIKYVIDPG + Y ++
Sbjct: 336 ARLSAGEQNKIFQPHAG--RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQR 393
Query: 383 LLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKA 442
L + PIS+A A QR GR GR G C RLY E +F + T PEI R NL++VILQ+ A
Sbjct: 394 LPIEPISQASANQRKGRCGRTEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTA 453
Query: 443 LGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPV------GHQMARLPLDP 496
LG+ DI F F+E P + +I + L LGA+ D K DP G Q+ARLP+DP
Sbjct: 454 LGLGDIEAFPFVEAPDKRNIQDGVRLLEELGAINDQIK--DPKKRLTESGKQLARLPIDP 511
Query: 497 IYSKALIVAGQFNCLEEMLITVAMLSVE 524
++ ++ A + CL+E++I + LS++
Sbjct: 512 RLARMVLEASKLGCLKEVMIIASALSIQ 539
Score = 243 (90.6 bits), Expect = 3.6e-73, Sum P(2) = 3.6e-73
Identities = 57/154 (37%), Positives = 88/154 (57%)
Query: 30 RRQKI--LQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDG 87
R+Q++ ++ LP++ + + + + ++I+ GETGSGKTTQLP+ G + G
Sbjct: 74 RKQQMPKIEYPALLPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYG 133
Query: 88 KLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL---- 140
LIG TQP EE ELG VGY +RF D+ S T+IK + +L
Sbjct: 134 -LIGHTQPRRLAARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEI 192
Query: 141 --DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
D +L++Y II+DEAHER+++ D +LG LK++
Sbjct: 193 QNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQL 226
Score = 45 (20.9 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 249 RQFPVEILYTLYPEPDYLDATL--ITIFQVHLDEAPGDILVFLTG 291
+ P + P P+Y DA L +T F++ L +A L +TG
Sbjct: 919 KSLPKTLRKNFVPAPNYADAFLARVTPFEMPLLDAMEKELRRMTG 963
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 525 (189.9 bits), Expect = 4.6e-72, Sum P(2) = 4.6e-72
Identities = 134/322 (41%), Positives = 182/322 (56%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYP-EP-----DYLDA----- 268
LK+I+MSA+++ FS YFG A V V GR FP+ ++Y EP + LD
Sbjct: 304 LKVILMSATINISLFSSYFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLR 363
Query: 269 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 328
L I + E GD+LVFL+G EI SV Q +++ V +P+ S+L
Sbjct: 364 VLEAIDNKYPPEERGDLLVFLSGMAEISSVLEAAQT----YASRTQRWVVLPLHSALSVA 419
Query: 329 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 388
Q +VF A G RK IL+TNIAETSVTI GI++V+D G VK YDP + L I
Sbjct: 420 DQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWI 479
Query: 389 SKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 448
S+A A QR GRAGR GPG CFRLY E+++D PEI+R L ++LQ+K++ V D
Sbjct: 480 SQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDP 539
Query: 449 IGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQF 508
F F+E P AS+ ++ L GAL D + P+G +A+LP+D + K LI+ F
Sbjct: 540 RTFPFIEPPPPASLETAILYLQDQGAL-DSSEALTPIGSLLAQLPVDVVIGKMLILGSMF 598
Query: 509 NCLEEMLITVAMLSVESIFFRS 530
+ E +L A LSV+S F RS
Sbjct: 599 HLAEPVLTIAAALSVQSPFTRS 620
Score = 243 (90.6 bits), Expect = 4.6e-72, Sum P(2) = 4.6e-72
Identities = 54/165 (32%), Positives = 90/165 (54%)
Query: 18 LHSKPFFNDSS-SRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQ 76
LH F + R K+ +R +LPIA R+++ ++++ ++++ G+TG GK+TQ+PQ
Sbjct: 137 LHYLDFSQKQAFGRLAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQ 196
Query: 77 FLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI- 135
+L AGF + TQP ES + G +VGY IRF+ + +T+I
Sbjct: 197 YLLAAGFSH----VACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIV 252
Query: 136 --------KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
++ +P L +Y +IVDE HER +H D LLG+L+++
Sbjct: 253 FLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRL 297
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 523 (189.2 bits), Expect = 4.7e-72, Sum P(2) = 4.7e-72
Identities = 132/322 (40%), Positives = 185/322 (57%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYP-EP-----DYLDA----- 268
LK+I+MSA+++ FS YF A V V GR FP+ ++Y EP + LD
Sbjct: 305 LKVILMSATINISLFSSYFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLR 364
Query: 269 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 328
L +I + E GD+LVFL+G EI +V Q +++ V +P+ S+L
Sbjct: 365 VLESIDHKYPPEERGDLLVFLSGMAEISAVLEAAQT----YASHTQRWVVLPLHSALSVA 420
Query: 329 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 388
Q +VF A G RK IL+TNIAETSVTI GI++V+D G VK YDP ++ L I
Sbjct: 421 DQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWI 480
Query: 389 SKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 448
S+A A QR GRAGR GPG CFRLY E+++D PEI+R L +++LQ+K++ V D
Sbjct: 481 SQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDP 540
Query: 449 IGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQF 508
F F+E P AS+ ++ L GAL D + P+G +A+LP+D + K LI+ F
Sbjct: 541 RTFPFIEPPPPASLETAILYLRDQGAL-DSSEALTPIGSLLAQLPVDVVIGKMLILGSMF 599
Query: 509 NCLEEMLITVAMLSVESIFFRS 530
+ +E +L A LSV+S F RS
Sbjct: 600 SLVEPVLTIAAALSVQSPFTRS 621
Score = 245 (91.3 bits), Expect = 4.7e-72, Sum P(2) = 4.7e-72
Identities = 56/169 (33%), Positives = 92/169 (54%)
Query: 18 LHSKPFFNDSS-SRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQ 76
LH F + R K+ ++R +LPIA R+++ ++++ ++++ G+TG GK+TQ+PQ
Sbjct: 138 LHYLDFGQKQAFGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQ 197
Query: 77 FLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI- 135
+L AGF + TQP ES + G +VGY IRF+ S +T+I
Sbjct: 198 YLLAAGFSH----VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIV 253
Query: 136 --------KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
++ +P L +Y +IVDE HER +H D LLG+L+++ R
Sbjct: 254 FLTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTR 302
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 525 (189.9 bits), Expect = 5.4e-72, Sum P(2) = 5.4e-72
Identities = 134/322 (41%), Positives = 182/322 (56%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYP-EP-----DYLDA----- 268
LK+I+MSA+++ FS YFG A V V GR FP+ ++Y EP + LD
Sbjct: 309 LKVILMSATINISLFSSYFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLR 368
Query: 269 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 328
L I + E GD+LVFL+G EI SV Q +++ V +P+ S+L
Sbjct: 369 VLEAIDNKYPPEERGDLLVFLSGMAEISSVLEAAQT----YASRTQRWVVLPLHSALSVA 424
Query: 329 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 388
Q +VF A G RK IL+TNIAETSVTI GI++V+D G VK YDP + L I
Sbjct: 425 DQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWI 484
Query: 389 SKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 448
S+A A QR GRAGR GPG CFRLY E+++D PEI+R L ++LQ+K++ V D
Sbjct: 485 SQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDP 544
Query: 449 IGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQF 508
F F+E P AS+ ++ L GAL D + P+G +A+LP+D + K LI+ F
Sbjct: 545 RTFPFIEPPPPASLETAILYLQDQGAL-DSSEALTPIGSLLAQLPVDVVIGKMLILGSMF 603
Query: 509 NCLEEMLITVAMLSVESIFFRS 530
+ E +L A LSV+S F RS
Sbjct: 604 HLAEPVLTIAAALSVQSPFTRS 625
Score = 243 (90.6 bits), Expect = 5.4e-72, Sum P(2) = 5.4e-72
Identities = 54/165 (32%), Positives = 90/165 (54%)
Query: 18 LHSKPFFNDSS-SRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQ 76
LH F + R K+ +R +LPIA R+++ ++++ ++++ G+TG GK+TQ+PQ
Sbjct: 142 LHYLDFSQKQAFGRLAKLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQ 201
Query: 77 FLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI- 135
+L AGF + TQP ES + G +VGY IRF+ + +T+I
Sbjct: 202 YLLAAGFSH----VACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIV 257
Query: 136 --------KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
++ +P L +Y +IVDE HER +H D LLG+L+++
Sbjct: 258 FLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRL 302
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 523 (189.2 bits), Expect = 1.3e-71, Sum P(2) = 1.3e-71
Identities = 124/322 (38%), Positives = 191/322 (59%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYT-LYPEP-----DYLDA----- 268
L+L++MSA+++ + FS YF A + V GR FP++++Y + PE + LD
Sbjct: 305 LRLVLMSATINIKLFSSYFNDAPVLQVPGRLFPIQVIYQPIPPEEQVSRSEKLDPRPYLR 364
Query: 269 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 328
L I Q + E GD+L+FL+G EI +++ Q +++ + +P+ S+L
Sbjct: 365 VLQGIDQRYPQEERGDLLLFLSGVAEISTIQEACQTYATH----TQRWIVLPLHSTLSLA 420
Query: 329 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 388
QQ +VF A G RK I++TNIAETSVTI G+++V+D G VK +DP M+ L I
Sbjct: 421 QQDKVFDIAPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWI 480
Query: 389 SKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 448
S+A + QR GRAGR GPG C+RLY E+++D PEI R L ++ILQ+K++G+ D
Sbjct: 481 SRASSEQRKGRAGRTGPGVCYRLYSESDYDAFAPYPVPEIHRVALDSLILQMKSMGLGDP 540
Query: 449 IGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQF 508
F F++ P +SI ++ L GAL + +L+ +G +A+LP+D + K L++ F
Sbjct: 541 RTFTFIDPPPASSIQTAVTYLREQGALDEHGELTS-IGRLLAQLPVDVVIGKMLVLGSVF 599
Query: 509 NCLEEMLITVAMLSVESIFFRS 530
N +E +L A LSV+S F RS
Sbjct: 600 NLVEPVLTVAAALSVQSPFLRS 621
Score = 241 (89.9 bits), Expect = 1.3e-71, Sum P(2) = 1.3e-71
Identities = 60/169 (35%), Positives = 91/169 (53%)
Query: 18 LHSKPFFNDSS-SRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQ 76
LH F S S+ K+ +++KSLPI ++VE VR + ++++ G+TG GK+TQ+PQ
Sbjct: 138 LHFLDFNQKQSFSKLSKLRREQKSLPIFQYRDKIVELVRTHPVVVVAGDTGCGKSTQVPQ 197
Query: 77 FLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI- 135
+L +G I TQP ES + G +VGY IRF+ + +T++
Sbjct: 198 YLLASGINN----IACTQPRRIACISLAKRVSFESLNQYGSKVGYQIRFETSRTLATKLL 253
Query: 136 --KEALL------DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
E LL D L +Y +IVDE HER +H D LLG+L+ + + R
Sbjct: 254 FLTEGLLLRQIQQDASLGQYQVLIVDEVHERHLHCDFLLGVLRSLLSLR 302
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 517 (187.1 bits), Expect = 2.7e-71, Sum P(2) = 2.7e-71
Identities = 132/324 (40%), Positives = 183/324 (56%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYT-------------LYPEPDYL 266
LK+I+MSA+++ FS YF A V V GR FP+ ++Y L P P +L
Sbjct: 307 LKVILMSATINISLFSSYFSHAPVVQVPGRLFPITVVYQPQEADQTASKSEKLDPRP-FL 365
Query: 267 DATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLP 326
L I + E GD+LVFL+G EI +V Q +++ V +P+ S+L
Sbjct: 366 -RVLEAIDNKYPPEERGDLLVFLSGMAEITTVLDAAQA----YASLTQRWVVLPLHSALS 420
Query: 327 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 386
Q +VF A AG RK IL+TNIAETSVTI GI++V+D G VK YDP ++ L
Sbjct: 421 VSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEF 480
Query: 387 PISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVD 446
IS+A A QR GRAGR GPG C+RLY E+++D PEI+R L ++LQ+K++ V
Sbjct: 481 WISQASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVG 540
Query: 447 DIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAG 506
D F F+E P AS+ ++ L GAL D + P+G +A+LP+D + K LI+
Sbjct: 541 DPRTFPFIEPPPPASVETAILYLQEQGAL-DSSEALTPIGSLLAQLPVDVVIGKMLILGS 599
Query: 507 QFNCLEEMLITVAMLSVESIFFRS 530
F+ E +L A LSV+S F RS
Sbjct: 600 MFSLAEPVLTIAAALSVQSPFTRS 623
Score = 244 (91.0 bits), Expect = 2.7e-71, Sum P(2) = 2.7e-71
Identities = 55/165 (33%), Positives = 91/165 (55%)
Query: 18 LHSKPFFNDSS-SRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQ 76
LH F + R K+ ++R +LPIA R+++ ++++ ++++ G+TG GK+TQ+PQ
Sbjct: 140 LHYLDFQQKQAFGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQ 199
Query: 77 FLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI- 135
+L AGF + TQP ES + G +VGY IRF+ S +T+I
Sbjct: 200 YLLAAGFSH----VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIV 255
Query: 136 --------KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
++ +P L +Y +IVDE HER +H D LLG+L+++
Sbjct: 256 FLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRL 300
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 522 (188.8 bits), Expect = 3.0e-71, Sum P(2) = 3.0e-71
Identities = 127/325 (39%), Positives = 192/325 (59%)
Query: 209 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYT-LYPEPDYLD 267
LK+ R+ LK+II SA++D FS +F A + V GR +PVE+ Y + E D +
Sbjct: 213 LKELLPRR-PDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTE 271
Query: 268 AT-LITIFQV--HLD-EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 323
L IF L E+ GDIL+F++G+ EI + + L L R +P+++
Sbjct: 272 RDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNK--LNL----RHTEILPLYA 325
Query: 324 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 383
L + +Q RVF + +G R+++LATN+AETS+T+PGIKYVIDPG + Y ++ L
Sbjct: 326 RLSNSEQNRVFQ-SHSG-RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRL 383
Query: 384 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 443
+ PIS+A A QR GR GR G C RLY E++F + T PEI R NL++VILQ+ AL
Sbjct: 384 PIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTAL 443
Query: 444 GVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLS----DPVGHQMARLPLDPIYS 499
G+ DI F F+E P + +I + L LGA+T D + S P+G Q+++LP+DP +
Sbjct: 444 GLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLA 503
Query: 500 KALIVAGQFNCLEEMLITVAMLSVE 524
+ ++ A + C+ E +I + LS++
Sbjct: 504 RMVLEAQKHGCVREAMIITSALSIQ 528
Score = 241 (89.9 bits), Expect = 3.0e-71, Sum P(2) = 3.0e-71
Identities = 55/142 (38%), Positives = 81/142 (57%)
Query: 40 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 99
+LP++ ++ ++E +R + ++I+ GETGSGKTTQLP+ G G LIG TQP
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLA 134
Query: 100 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPYLSRYSAI 150
EE E G +GY +RF D S +T +K + +L D L +Y I
Sbjct: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194
Query: 151 IVDEAHERTVHTDVLLGLLKKV 172
I+DEAHER+++ D LLG LK++
Sbjct: 195 IIDEAHERSLNIDFLLGYLKEL 216
Score = 37 (18.1 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 294 EIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFA 335
++E+V++ Q+ + +LP A R+ V + E ++ FA
Sbjct: 1236 KVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFA 1277
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 436 (158.5 bits), Expect = 3.6e-71, Sum P(3) = 3.6e-71
Identities = 98/236 (41%), Positives = 138/236 (58%)
Query: 293 EEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAE 352
EE E E +E + L +P++S LP++QQM+VF G R I+ATN+AE
Sbjct: 748 EENEEEEEGFEESIDSKESEVGPLYVLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAE 807
Query: 353 TSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLY 412
TS+TIPGI+YV+D G K R Y+ G++S V +SKA A QR+GRAGR GPG C+RLY
Sbjct: 808 TSLTIPGIRYVVDCGRSKERKYNQENGVQSFEVDWVSKASANQRAGRAGRTGPGHCYRLY 867
Query: 413 PENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFL 471
F D + PEI R +++L +K++G+D I F F P R S+ K+ E L +
Sbjct: 868 SSAVFEDFFPQFSVPEILRMPFESIVLSMKSMGIDQIANFPFPTPPDRFSLKKAEELLVI 927
Query: 472 LGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 527
LGAL + K +G +M+ PL P ++K LI+ Q CL ++ V+ LSV F
Sbjct: 928 LGALDKEQKQITDLGKKMSLFPLSPRFAKILIIGNQQECLSYIIAIVSALSVGDPF 983
Score = 204 (76.9 bits), Expect = 3.6e-71, Sum P(3) = 3.6e-71
Identities = 50/117 (42%), Positives = 66/117 (56%)
Query: 15 NPKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQL 74
N ++ + F + + R I QQR LP+ + E R++E V +D +I+ GETGSGKTTQ+
Sbjct: 418 NKEMQRRAFVVEVN-RTDSIQQQRALLPVFAEEHRIMEAVYHHDCIILCGETGSGKTTQV 476
Query: 75 PQFLFHAGF---CRD--GKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFD 126
PQFL+ AGF D +IGVTQP E G + G RVGY IRFD
Sbjct: 477 PQFLYEAGFGNLLHDLYPGMIGVTQPRRVAAVSMAERVGSELG-DHGHRVGYQIRFD 532
Score = 159 (61.0 bits), Expect = 1.9e-66, Sum P(3) = 1.9e-66
Identities = 40/104 (38%), Positives = 56/104 (53%)
Query: 89 LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD-------RTSTSTR------- 134
+IGVTQP E G + G RVGY IRFD T+ +
Sbjct: 496 MIGVTQPRRVAAVSMAERVGSELG-DHGHRVGYQIRFDTTIKNEGKENGTALKFMTDGVL 554
Query: 135 IKEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 178
++E + D L++YSAII+DEAHER ++TD+L+G+L +V R K
Sbjct: 555 LREMMTDFLLAKYSAIIIDEAHERNINTDILIGMLTRVVKLRRK 598
Score = 148 (57.2 bits), Expect = 3.6e-71, Sum P(3) = 3.6e-71
Identities = 39/93 (41%), Positives = 52/93 (55%)
Query: 217 FAPLKLIIMSASLDARGFSEYFGCAKA----VHVQGRQFPVEILYTLYPEPDYLDATLIT 272
+ PLKLIIMSA+L FSE K ++VQ RQ+PV I + DYL+
Sbjct: 607 YKPLKLIIMSATLRVSDFSENPALFKTPPPIINVQARQYPVSIHFNKKTNYDYLEEAFKK 666
Query: 273 IFQVHLDEAPGDILVFLTGQEEIES-VERLVQE 304
++H G IL+FLTGQ EI + V++L QE
Sbjct: 667 TCKIHRKLPEGGILIFLTGQNEITTLVKKLRQE 699
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 510 (184.6 bits), Expect = 1.0e-70, Sum P(2) = 1.0e-70
Identities = 126/313 (40%), Positives = 182/313 (58%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY----TLYPEPDYLD-----ATL 270
LKL+I SA++D FS +F A V V GR +PVEI Y + E D + A L
Sbjct: 220 LKLVITSATIDPERFSRHFDNAPIVRVPGRTYPVEIRYRPPDSAEEESDETERGEQQAIL 279
Query: 271 ITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQ 330
+ ++H + GDIL+FL+G+ EI R E L + A +++ P++S L +Q
Sbjct: 280 DAVDELHRENT-GDILIFLSGEREI----RDTAESLRKHHPADCEVL--PLYSRLTVSEQ 332
Query: 331 MRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISK 390
++F P G R+++LATN+AETS+T+PGI+ VID G+ + Y ++ L + IS+
Sbjct: 333 EKIFKPH--GRRRIVLATNVAETSLTVPGIRGVIDAGYARISRYSHRSKLQRLPIEKISR 390
Query: 391 AQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIG 450
A A QR+GR GR GPG C RLY E +F + T PEI R NL+ VILQ+KAL + DI
Sbjct: 391 ASANQRAGRCGRVGPGVCIRLYSEQDFLNRPEFTDPEILRTNLAAVILQMKALNLGDIRV 450
Query: 451 FDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNC 510
F F+E P + L L + AL +L++ +G ++ARLP+DP + L+ + NC
Sbjct: 451 FPFVEPPDERLVRDGLRTLQEINALDAQGRLTE-LGRRLARLPVDPRLGRILLAGAEENC 509
Query: 511 LEEMLITVAMLSV 523
L E+ I VA LSV
Sbjct: 510 LSEVCIIVAALSV 522
Score = 248 (92.4 bits), Expect = 1.0e-70, Sum P(2) = 1.0e-70
Identities = 57/145 (39%), Positives = 79/145 (54%)
Query: 35 LQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQ 94
L+ + LP++ + E +R+N ++I+ GETGSGKTTQLP+ AG G IG TQ
Sbjct: 68 LEYPEELPVSERRGEIAEAIRQNQVVIVCGETGSGKTTQLPKICLEAGRGIQG-YIGHTQ 126
Query: 95 PXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLS 145
P +E LG+ VGY +RF D+T + IK E D +L
Sbjct: 127 PRRIAARSVAARIADELKRPLGETVGYKVRFHDQTRPDSLIKLMTDGILLAETQTDRFLD 186
Query: 146 RYSAIIVDEAHERTVHTDVLLGLLK 170
+Y +IVDEAHER+++ D LLG LK
Sbjct: 187 QYDTLIVDEAHERSLNIDFLLGYLK 211
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 427 (155.4 bits), Expect = 2.3e-70, Sum P(3) = 2.3e-70
Identities = 89/203 (43%), Positives = 138/203 (67%)
Query: 329 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 388
QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK ++P G++ L VVPI
Sbjct: 278 QQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPI 337
Query: 389 SKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGVDD 447
SK++ALQRSGRAGR GKCFR+Y ++ +++ + D PEIKR +L++V+L LK L + D
Sbjct: 338 SKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHD 397
Query: 448 IIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQ 507
+I F +++ P+ I+++L+QL+ A+ ++ +G M PL P + A+I A
Sbjct: 398 VIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPPHLTCAVIKAAS 456
Query: 508 FNCLEEMLITVA-MLSVESIFFR 529
+C E++L+ +A MLSVE++F R
Sbjct: 457 LDC-EDLLLPIAAMLSVENVFIR 478
Score = 193 (73.0 bits), Expect = 2.3e-70, Sum P(3) = 2.3e-70
Identities = 46/104 (44%), Positives = 59/104 (56%)
Query: 89 LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKE----ALL---- 140
+IGVTQP EE LG +VGY +RFDD +S T IK LL
Sbjct: 1 MIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHIL 60
Query: 141 -DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 183
DP L+++S II+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 61 GDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 104
Score = 142 (55.0 bits), Expect = 2.3e-70, Sum P(3) = 2.3e-70
Identities = 49/154 (31%), Positives = 74/154 (48%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----YLDATLITI 273
LK+++MSA+++ S +FG + GR +PV E L D Y+ A +
Sbjct: 105 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 164
Query: 274 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 326
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 165 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 224
Query: 327 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGI 360
+ Q + K I + T +TI GI
Sbjct: 225 TVSQTSLTFVTHIQIMKQISENQHSLTGLTIAGI 258
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 513 (185.6 bits), Expect = 3.1e-70, Sum P(2) = 3.1e-70
Identities = 134/332 (40%), Positives = 186/332 (56%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYP-EP-----DYLDAT-LIT 272
LK+I+MSA+++ FS YFG A V V GR FP+ ++Y EP + LD I
Sbjct: 305 LKVILMSATVNTSLFSAYFGQAPVVQVPGRLFPITVVYQPQEAEPTASTLEKLDPRPFIR 364
Query: 273 IFQV----HLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 328
+ + + E GD+LVFL+G EI +V Q + S + V +P+ S+L
Sbjct: 365 VLEAIDSKYPPEERGDLLVFLSGLAEIGAVLEAAQAHARR----SGRWVVLPLHSTLSVA 420
Query: 329 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 388
Q +VF A G RK IL+TNIAETSVTI GI++V+D G VK YDP ++ L I
Sbjct: 421 AQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWI 480
Query: 389 SKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 448
S+A A QR GRAGR GPG CFRLY E+++D PEI+R L ++LQ+K++ V D
Sbjct: 481 SQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDP 540
Query: 449 IGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQF 508
F F+E P AS+ ++ L GAL D + P+G +A+LP+D + K L++
Sbjct: 541 RTFPFIEPPPAASLETAILYLRDQGAL-DGSEALTPIGSLLAQLPVDIVIGKMLVLGSVL 599
Query: 509 NCLEEMLITVAMLSVESIFFRSPGEVRRGKKC 540
+ E +L A LSV+S F RS R KC
Sbjct: 600 HLAEPVLTIAAALSVQSPFTRS---TRSNPKC 628
Score = 238 (88.8 bits), Expect = 3.1e-70, Sum P(2) = 3.1e-70
Identities = 55/165 (33%), Positives = 92/165 (55%)
Query: 18 LHSKPFFNDSS-SRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQ 76
LH F + +R ++ ++R +LPI+ R+++ ++++ ++++ G+TG GK+TQ+PQ
Sbjct: 138 LHYLDFGQKQAFARLARLQRERAALPISQYRDRILQTLKEHQVVVVAGDTGCGKSTQVPQ 197
Query: 77 FLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI- 135
+L AGF + TQP ES + G +VGY IRF+ S +T+I
Sbjct: 198 YLLAAGFSH----VACTQPRRIACISLAKRVGLESLSQYGSQVGYQIRFESTRSAATKIV 253
Query: 136 --KEALL------DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
LL +P L +Y +IVDE HER +H D LLG+L+++
Sbjct: 254 FLTVGLLLRHVQREPTLPQYRVLIVDEVHERHLHNDFLLGVLQRL 298
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 387 (141.3 bits), Expect = 8.2e-70, Sum P(3) = 8.2e-70
Identities = 85/223 (38%), Positives = 135/223 (60%)
Query: 316 LVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYD 375
L +P++S L SE+Q R+F P G R +++TN+AETS+TIP IKYV+D G K RLYD
Sbjct: 617 LWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYD 676
Query: 376 PVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLS 434
+ G+ + +V SKA A QR+GRAGR G C+RLY + D ED ++P+I++ +
Sbjct: 677 KLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVE 736
Query: 435 NVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGAL----TDDCKLSDPV---GH 487
+++LQ++ +G+D ++ F F P + + + +L +LGAL T++ L V GH
Sbjct: 737 DLMLQMRCMGIDRVVHFPFPSPPDQVQLQAAERRLIVLGALEVAKTENTDLPPAVTRLGH 796
Query: 488 QMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRS 530
++R P+ P + K L ++ Q N L + VA LSV+ + +
Sbjct: 797 VISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLIET 839
Score = 292 (107.8 bits), Expect = 8.2e-70, Sum P(3) = 8.2e-70
Identities = 66/158 (41%), Positives = 97/158 (61%)
Query: 30 RRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL 89
R ++ R LPI + E++++E + +N I+I+ GETGSGKTTQLPQFL+ AG+ + K+
Sbjct: 249 RTTEVQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYAQH-KM 307
Query: 90 IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------ 140
IGVT+P E + + V Y IRF+ + +TRIK + +L
Sbjct: 308 IGVTEPRRVAAIAMSKRVAHEMNLPESE-VSYLIRFEGNVTPATRIKFMTDGVLLKEIET 366
Query: 141 DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 178
D LS+YS II+DEAHER+V+TD+L+GLL ++ R K
Sbjct: 367 DFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHK 404
Score = 123 (48.4 bits), Expect = 8.2e-70, Sum P(3) = 8.2e-70
Identities = 32/86 (37%), Positives = 45/86 (52%)
Query: 219 PLKLIIMSASLDARGFSEYFGCAKA----VHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
PLKLIIMSA+L F+E K + V+ RQFPV I + DY+
Sbjct: 408 PLKLIIMSATLRVSDFTENTRLFKIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTL 467
Query: 275 QVHLDEAPGDILVFLTGQEEIESVER 300
++H G IL+F+TGQ+E+ + R
Sbjct: 468 KIHNKLPEGGILIFVTGQQEVNQLVR 493
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 513 (185.6 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 130/322 (40%), Positives = 182/322 (56%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYP-EP-----DYLDA----- 268
LK+++MSA+++ FS YFG A V V GR FP+ ++Y EP + LD
Sbjct: 305 LKVVLMSATINISLFSSYFGNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLR 364
Query: 269 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 328
L I + E GD+LVFL+G EI +V Q +++ V +P+ S+L
Sbjct: 365 VLEAIDNKYPPEERGDLLVFLSGMAEISAVLEPAQA----YASHTQRWVVLPLHSALSVA 420
Query: 329 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 388
Q +VF A G RK IL+TNIAETSVTI GI++V+D G VK YDP ++ L I
Sbjct: 421 DQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWI 480
Query: 389 SKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 448
S+A A QR GRAGR GPG CFRLY E+++D PEI+R L ++LQ+K++ V D
Sbjct: 481 SQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDP 540
Query: 449 IGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQF 508
F F+E P S+ ++ L GAL D + P+G +A+LP+D + K LI+ F
Sbjct: 541 RTFPFIEPPPPTSLETAILYLRDQGAL-DSSEALTPIGSLLAQLPVDVVIGKMLILGSMF 599
Query: 509 NCLEEMLITVAMLSVESIFFRS 530
+ E +L A LSV++ F RS
Sbjct: 600 HLAEPVLTIAAALSVQTPFTRS 621
Score = 233 (87.1 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 54/165 (32%), Positives = 90/165 (54%)
Query: 18 LHSKPFFNDSS-SRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQ 76
LH F + R K+ ++R +LPIA +++ ++++ ++++ G+TG GK+TQ+PQ
Sbjct: 138 LHYLDFCQKQAFGRLAKLQRERAALPIAQYGHHILQMLKEHQVVVVAGDTGCGKSTQVPQ 197
Query: 77 FLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI- 135
+L AG C + TQP ES + G +VGY IRF+ S +T+I
Sbjct: 198 YLLAAG-CSH---VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIV 253
Query: 136 --------KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
++ +P L +Y +IVDE HER +H D LLG+L+++
Sbjct: 254 FLTVGLLLRQMQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRL 298
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 468 (169.8 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 119/337 (35%), Positives = 181/337 (53%)
Query: 221 KLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY----------TLYPEPDYLDATL 270
+++I SA+++ FS YF + + +PV +++ T E L+ +
Sbjct: 154 RIVISSATINTAMFSRYFNECPVIKIDAVAYPVTVIFDPPDTPASTHTKEAEAALLEKIV 213
Query: 271 ITIFQVHLDEAPGDILVFLTGQEEIES-VERLVQERLLQLPEASRKLVTVPIFSSLPSEQ 329
+ +V G IL+FL G+ I++ + RL ER RKL +P++ L E+
Sbjct: 214 CIVERVIASRDKGAILIFLPGERSIKNCITRLSHERWF------RKLFLLPLYGRLSKEE 267
Query: 330 QMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPIS 389
Q +VF A G RKV++ATNIAETS+TI + VID G VK Y+P+ SL PIS
Sbjct: 268 QEQVFNRAPFGKRKVVIATNIAETSITIDDVTTVIDSGLVKLNSYNPLSYTASLDETPIS 327
Query: 390 KAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDII 449
+A QR GRAGR G C+RLY ++F++ E T EI R +LS V++++ LG+ D
Sbjct: 328 QASCNQRRGRAGRVRAGTCYRLYSRDDFEQREPYTLEEIYRTDLSEVVMRMAELGIHDFE 387
Query: 450 GFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVA-GQF 508
FDF+ P II + + L LLGAL DD LS+ +G M PL P S+ ++ A ++
Sbjct: 388 HFDFISPPGTHGIIGAEDTLRLLGALEDDRSLSE-IGKMMCLFPLGPRQSRMIVEALRRY 446
Query: 509 -NCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIF 544
+ ++++LI A LS S S + + KK + F
Sbjct: 447 PHSIDDVLIAAAFLSARSPLIFSEDQEEKTKKAHGTF 483
Score = 254 (94.5 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 60/148 (40%), Positives = 86/148 (58%)
Query: 39 KSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXX 98
K LP+ S + +++ + + ++++ TGSGKTTQLP L AG+ +G IGVTQP
Sbjct: 5 KQLPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGY-NEGGAIGVTQPRRI 63
Query: 99 XXXXXXXXXXEES-GVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRYS 148
++ V+ G VGY +RF+D T T+IK E LDP LS+YS
Sbjct: 64 AVLSVSEFIAKQVLHVQPGI-VGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPLLSKYS 122
Query: 149 AIIVDEAHERTVHTDVLLGLLKKVQNAR 176
I+VDEAHER+++ D +LGLLK+V R
Sbjct: 123 IIMVDEAHERSLNIDFILGLLKRVLQQR 150
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 710 (255.0 bits), Expect = 3.3e-69, P = 3.3e-69
Identities = 169/429 (39%), Positives = 255/429 (59%)
Query: 130 STSTRIKEALLDPYLSR---YSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSXX 186
S + R+ + + D L Y+ D ERTV + G+L + ++ R D +S
Sbjct: 594 SVAKRVSDEM-DTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLR-ESLRDPELDSYSAI 651
Query: 187 XXXXXXSDMILDRGNDTNGI-NTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVH 245
D +R T+ + L++ R+ LKLI+ SA++D+ F+ +FG
Sbjct: 652 IM-----DEAHERSLSTDVLFGLLREIVARRH-DLKLIVTSATMDSSKFATFFGNVPTFT 705
Query: 246 VQGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQER 305
+ GR FPV+++++ DY+++ + QVHL GD+L+F+ GQE+IE +++ER
Sbjct: 706 IPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEER 765
Query: 306 LLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVID 365
L ++ A L +PI+S LPS+ Q ++F ++ G RK ++ATNIAETS+T+ GI YVID
Sbjct: 766 LAEIDNAPA-LSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVID 824
Query: 366 PGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDST 424
G+ K ++Y+P GM++L + PIS+A A QRSGRAGR GPG+ +RLY + ++ D+L T
Sbjct: 825 SGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALT 884
Query: 425 KPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDP 484
PEI+R NL+N +L LK+LGV D++ F FM+ P + +I+ SL QL++LGAL L+
Sbjct: 885 VPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTT- 943
Query: 485 VGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIF 544
+G QMA PLDP + LIVA + C E+LI V+MLSV SIF+R G E F
Sbjct: 944 LGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSVPSIFYRPKGREDEADGVREKF 1003
Query: 545 CKSRWRSPH 553
R S H
Sbjct: 1004 --QRPESDH 1010
Score = 328 (120.5 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 71/153 (46%), Positives = 99/153 (64%)
Query: 29 SRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK 88
SR++ I +QR+ LP+ + + L+ +R+N ++IIVGETGSGKTTQL Q+L G+ + G
Sbjct: 522 SRKKTISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRG- 580
Query: 89 LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EAL 139
+IG TQP +E +LG+ VGY+IRF+D TS T IK E+L
Sbjct: 581 MIGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESL 640
Query: 140 LDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
DP L YSAII+DEAHER++ TDVL GLL+++
Sbjct: 641 RDPELDSYSAIIMDEAHERSLSTDVLFGLLREI 673
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 401 (146.2 bits), Expect = 5.8e-69, Sum P(3) = 5.8e-69
Identities = 91/198 (45%), Positives = 123/198 (62%)
Query: 333 VFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQ 392
VF A G RK IL+TNIAETSVTI GI++V+D G VK YDP ++ L IS+A
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 399
Query: 393 ALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFD 452
A QR GRAGR GPG CFRLY E+++D PEI+R L +++LQ+K++ V D F
Sbjct: 400 AEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFP 459
Query: 453 FMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLE 512
F+E P AS+ ++ L GAL D + P+G +A+LP+D + K LI+ F+ +E
Sbjct: 460 FIEPPPPASLETAILYLRDQGAL-DSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVE 518
Query: 513 EMLITVAMLSVESIFFRS 530
+L A LSV+S F RS
Sbjct: 519 PVLTIAAALSVQSPFTRS 536
Score = 245 (91.3 bits), Expect = 5.8e-69, Sum P(3) = 5.8e-69
Identities = 56/169 (33%), Positives = 92/169 (54%)
Query: 18 LHSKPFFNDSS-SRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQ 76
LH F + R K+ ++R +LPIA R+++ ++++ ++++ G+TG GK+TQ+PQ
Sbjct: 138 LHYLDFGQKQAFGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQ 197
Query: 77 FLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI- 135
+L AGF + TQP ES + G +VGY IRF+ S +T+I
Sbjct: 198 YLLAAGFSH----VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIV 253
Query: 136 --------KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
++ +P L +Y +IVDE HER +H D LLG+L+++ R
Sbjct: 254 FLTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTR 302
Score = 84 (34.6 bits), Expect = 5.8e-69, Sum P(3) = 5.8e-69
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEI 255
LK+I+MSA+++ FS YF A V V GR FP+ +
Sbjct: 305 LKVILMSATINISLFSSYFSNAPVVQVPGRLFPITV 340
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 494 (179.0 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 121/323 (37%), Positives = 183/323 (56%)
Query: 209 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDA 268
LKQ +K LK+II SA++D FS++F A + V GR +PVE Y + D
Sbjct: 212 LKQIL-KKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPVETRYRPLVQDTEADL 270
Query: 269 TLITIFQVHLDEAP----GDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 324
I +DE GDIL+F+ G+ EI + R + E +P+++
Sbjct: 271 DQIEGIFAAVDELVAEGLGDILIFMNGEREIRDTAEQLNRRNYRDTEI------LPLYAR 324
Query: 325 LPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLL 384
L +Q +VF+ + G R+++LATN+AETS+T+PGI+YVIDPG + Y ++ L
Sbjct: 325 LSYGEQSKVFS-SHTG-RRIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLP 382
Query: 385 VVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALG 444
+ PIS+A A QR GR GR GPG C RLY E +F+ T PEI R NL++VILQ+ A+G
Sbjct: 383 IEPISQASANQRQGRCGRVGPGICIRLYDEADFNNRPAFTDPEILRTNLASVILQMLAIG 442
Query: 445 VDDIIGFDFMEKPSRASIIKS---LEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKA 501
+ DI F F+E P I LE+L + + L+ P+G Q++++P+DP ++
Sbjct: 443 LGDIAAFPFIEPPDPRHIRDGFLLLEELQAVKQQKGNIVLT-PLGRQLSQIPVDPRLARM 501
Query: 502 LIVAGQFNCLEEMLITVAMLSVE 524
+I + Q CL E+L+ + LS++
Sbjct: 502 VIESHQLGCLNEVLVIASGLSIQ 524
Score = 239 (89.2 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 54/146 (36%), Positives = 80/146 (54%)
Query: 40 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 99
+LP++ + + + + + N ++II GETGSGKTTQLP+ G G IG TQP
Sbjct: 75 NLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRG-FIGHTQPRRLA 133
Query: 100 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPYLSRYSAI 150
EE LG+ VG+ +RF D + + IK + +L D YL +Y I
Sbjct: 134 ARSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTI 193
Query: 151 IVDEAHERTVHTDVLLGLLKKVQNAR 176
I+DEAHER+++ D +LG LK++ R
Sbjct: 194 IIDEAHERSLNIDFILGYLKQILKKR 219
Score = 38 (18.4 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 437 ILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFL 471
+L KAL V D FD + R + + EQ+ L
Sbjct: 1115 LLDEKALDVRDAAQFDAAKDWVRQELNPTAEQIAL 1149
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 494 (179.0 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 121/323 (37%), Positives = 183/323 (56%)
Query: 209 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDA 268
LKQ +K LK+II SA++D FS++F A + V GR +PVE Y + D
Sbjct: 212 LKQIL-KKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPVETRYRPLVQDTEADL 270
Query: 269 TLITIFQVHLDEAP----GDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 324
I +DE GDIL+F+ G+ EI + R + E +P+++
Sbjct: 271 DQIEGIFAAVDELVAEGLGDILIFMNGEREIRDTAEQLNRRNYRDTEI------LPLYAR 324
Query: 325 LPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLL 384
L +Q +VF+ + G R+++LATN+AETS+T+PGI+YVIDPG + Y ++ L
Sbjct: 325 LSYGEQSKVFS-SHTG-RRIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLP 382
Query: 385 VVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALG 444
+ PIS+A A QR GR GR GPG C RLY E +F+ T PEI R NL++VILQ+ A+G
Sbjct: 383 IEPISQASANQRQGRCGRVGPGICIRLYDEADFNNRPAFTDPEILRTNLASVILQMLAIG 442
Query: 445 VDDIIGFDFMEKPSRASIIKS---LEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKA 501
+ DI F F+E P I LE+L + + L+ P+G Q++++P+DP ++
Sbjct: 443 LGDIAAFPFIEPPDPRHIRDGFLLLEELQAVKQQKGNIVLT-PLGRQLSQIPVDPRLARM 501
Query: 502 LIVAGQFNCLEEMLITVAMLSVE 524
+I + Q CL E+L+ + LS++
Sbjct: 502 VIESHQLGCLNEVLVIASGLSIQ 524
Score = 239 (89.2 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 54/146 (36%), Positives = 80/146 (54%)
Query: 40 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 99
+LP++ + + + + + N ++II GETGSGKTTQLP+ G G IG TQP
Sbjct: 75 NLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRG-FIGHTQPRRLA 133
Query: 100 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPYLSRYSAI 150
EE LG+ VG+ +RF D + + IK + +L D YL +Y I
Sbjct: 134 ARSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTI 193
Query: 151 IVDEAHERTVHTDVLLGLLKKVQNAR 176
I+DEAHER+++ D +LG LK++ R
Sbjct: 194 IIDEAHERSLNIDFILGYLKQILKKR 219
Score = 38 (18.4 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 437 ILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFL 471
+L KAL V D FD + R + + EQ+ L
Sbjct: 1115 LLDEKALDVRDAAQFDAAKDWVRQELNPTAEQIAL 1149
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 419 (152.6 bits), Expect = 2.2e-67, Sum P(2) = 2.2e-67
Identities = 98/232 (42%), Positives = 135/232 (58%)
Query: 310 PEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFV 369
P+AS L +P++S L E+Q +VF P G R ++ATN+AETS+TIPGIKYV+D G V
Sbjct: 369 PDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKV 428
Query: 370 KARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIK 429
K R YD V G+ S V +S+A A QR+GRAGR PG C+RLY F E PEI
Sbjct: 429 KKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEIT 488
Query: 430 RCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALT-----------DD 478
R + ++ILQ+KAL V+ +I F F PS +++ + E L LGAL +
Sbjct: 489 RRPVEDLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQE 548
Query: 479 CKLSDPV---GHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 527
+LS P+ G MA P+ P Y+K L ++ Q CL + VA ++V +F
Sbjct: 549 NRLSCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF 600
Score = 304 (112.1 bits), Expect = 2.2e-67, Sum P(2) = 2.2e-67
Identities = 69/173 (39%), Positives = 104/173 (60%)
Query: 16 PKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLP 75
P+ +KP +R ++ ++R LPI S E+ ++E V ++ I+I+ GETGSGKTTQ+P
Sbjct: 14 PRALAKPAVFIPVNRSPEMQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVP 73
Query: 76 QFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRV-GYSIRFDDRTSTSTR 134
QFL+ AGF + +IGVT+P +E + L QRV Y IR++ + TR
Sbjct: 74 QFLYEAGFSSEDSIIGVTEPRRVAAVAMSQRVAKE--MNLSQRVVSYQIRYEGNVTEETR 131
Query: 135 IK---EALL------DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 178
IK + +L D L RY +I+DEAHER+V+TD+L+GLL ++ R+K
Sbjct: 132 IKFMTDGVLLKEIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAK 184
Score = 119 (46.9 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 41/136 (30%), Positives = 64/136 (47%)
Query: 213 QGRKFAPLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFPVEILYTLY-PEPDYLD 267
+ ++ PLKL+IMSA+L F++ + + V+ RQFPV + + P DY
Sbjct: 182 RAKRNLPLKLLIMSATLRVEDFTQNPRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSG 241
Query: 268 ATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPS 327
+ ++H G ILVFLTGQ E+ ++ R RL + SR S
Sbjct: 242 ECFRKVCKIHRMLPAGGILVFLTGQAEVHALCR----RLRKAFPPSRARPQEKDDDQKDS 297
Query: 328 EQQMRVFAPAAAGFRK 343
++MR F + A +K
Sbjct: 298 VEEMRKFKKSRARAKK 313
Score = 39 (18.8 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 9 VSNSTHNPKLHSKP 22
V + T NP+L +KP
Sbjct: 200 VEDFTQNPRLFAKP 213
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 419 (152.6 bits), Expect = 4.8e-67, Sum P(2) = 4.8e-67
Identities = 98/232 (42%), Positives = 135/232 (58%)
Query: 310 PEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFV 369
P+AS L +P++S L E+Q +VF P G R ++ATN+AETS+TIPGIKYV+D G V
Sbjct: 582 PDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKV 641
Query: 370 KARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIK 429
K R YD V G+ S V +S+A A QR+GRAGR PG C+RLY F E PEI
Sbjct: 642 KKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEIT 701
Query: 430 RCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALT-----------DD 478
R + ++ILQ+KAL V+ +I F F PS +++ + E L LGAL +
Sbjct: 702 RRPVEDLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQE 761
Query: 479 CKLSDPV---GHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 527
+LS P+ G MA P+ P Y+K L ++ Q CL + VA ++V +F
Sbjct: 762 NRLSCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF 813
Score = 304 (112.1 bits), Expect = 4.8e-67, Sum P(2) = 4.8e-67
Identities = 69/173 (39%), Positives = 104/173 (60%)
Query: 16 PKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLP 75
P+ +KP +R ++ ++R LPI S E+ ++E V ++ I+I+ GETGSGKTTQ+P
Sbjct: 227 PRALAKPAVFIPVNRSPEMQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVP 286
Query: 76 QFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRV-GYSIRFDDRTSTSTR 134
QFL+ AGF + +IGVT+P +E + L QRV Y IR++ + TR
Sbjct: 287 QFLYEAGFSSEDSIIGVTEPRRVAAVAMSQRVAKE--MNLSQRVVSYQIRYEGNVTEETR 344
Query: 135 IK---EALL------DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 178
IK + +L D L RY +I+DEAHER+V+TD+L+GLL ++ R+K
Sbjct: 345 IKFMTDGVLLKEIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAK 397
Score = 119 (46.9 bits), Expect = 3.6e-31, Sum P(2) = 3.6e-31
Identities = 41/136 (30%), Positives = 64/136 (47%)
Query: 213 QGRKFAPLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFPVEILYTLY-PEPDYLD 267
+ ++ PLKL+IMSA+L F++ + + V+ RQFPV + + P DY
Sbjct: 395 RAKRNLPLKLLIMSATLRVEDFTQNPRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSG 454
Query: 268 ATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPS 327
+ ++H G ILVFLTGQ E+ ++ R RL + SR S
Sbjct: 455 ECFRKVCKIHRMLPAGGILVFLTGQAEVHALCR----RLRKAFPPSRARPQEKDDDQKDS 510
Query: 328 EQQMRVFAPAAAGFRK 343
++MR F + A +K
Sbjct: 511 VEEMRKFKKSRARAKK 526
Score = 39 (18.8 bits), Expect = 3.6e-39, Sum P(2) = 3.6e-39
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 9 VSNSTHNPKLHSKP 22
V + T NP+L +KP
Sbjct: 413 VEDFTQNPRLFAKP 426
Score = 39 (18.8 bits), Expect = 3.6e-39, Sum P(2) = 3.6e-39
Identities = 16/53 (30%), Positives = 22/53 (41%)
Query: 4 VAEGEVSNSTHNPKL---HSKPFFNDSSSRRQKILQQR-KSLPIASVEKRLVE 52
V G+ T P L KP QKIL+Q+ K A + ++L E
Sbjct: 50 VLPGKKKKKTKAPPLSKKEKKPLTKKEKKVLQKILEQKEKKSQRAEMLQKLSE 102
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 435 (158.2 bits), Expect = 4.8e-66, Sum P(3) = 4.8e-66
Identities = 103/269 (38%), Positives = 155/269 (57%)
Query: 263 PDYLDATLITIFQVHL--DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVP 320
PD + LI H+ E PG +LVF+TG ++I S++ ++ L L + + K++ +
Sbjct: 557 PDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSL-LGDPN-KVLLLA 614
Query: 321 IFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGM 380
S+ S +Q +F G RK++LATN+AETS+TI + YVID G K YD +
Sbjct: 615 CHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNT 674
Query: 381 ESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQL 440
LL ISKA A QR GRAGR PG+C+ LYP ++ D +PE+ R L ++ LQ+
Sbjct: 675 PCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQI 734
Query: 441 KALGVDDIIGF--DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIY 498
K+LG+ I F ++ P S+ ++E L ++GAL DD L+ P+G ++ LP++P
Sbjct: 735 KSLGLGSISEFLSRALQPPEALSVQNAVEYLKIIGALDDDENLT-PLGKNLSMLPVEPKL 793
Query: 499 SKALIVAGQFNCLEEMLITVAMLSVESIF 527
K LI+ FNCL+ ++ VA LSV F
Sbjct: 794 GKMLILGAIFNCLDPVMTVVAGLSVRDPF 822
Score = 195 (73.7 bits), Expect = 4.8e-66, Sum P(3) = 4.8e-66
Identities = 48/155 (30%), Positives = 77/155 (49%)
Query: 28 SSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGF-CRD 86
S QK++ RK+LP + L++ + N ++++ GETG GKTTQLPQ++ +
Sbjct: 286 SPEGQKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAAR 345
Query: 87 GKLIGV--TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI--------- 135
G + TQP E G ++G+ VGY +R + TR+
Sbjct: 346 GATCSIICTQPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLL 405
Query: 136 KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLK 170
+ L+D L + ++VDE HER ++ D LL +LK
Sbjct: 406 RRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLK 440
Score = 108 (43.1 bits), Expect = 4.8e-66, Sum P(3) = 4.8e-66
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 194 DMILDRG-NDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFP 252
D I +RG N+ + LK R+ LKLI+MSA+L+A FS YFG A A+H+ G +P
Sbjct: 423 DEIHERGMNEDFLLIVLKDLLPRR-PDLKLILMSATLNAELFSSYFGGAPAMHIPGFTYP 481
Query: 253 VEILYTLYPEPDYLDAT 269
V + DYL+ +
Sbjct: 482 VRAHFL----EDYLETS 494
Score = 39 (18.8 bits), Expect = 8.2e-41, Sum P(2) = 8.2e-41
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 230 DARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDY 265
D R F A + + RQ+ ++ + P P+Y
Sbjct: 160 DRRDFDHISALATRMGLHSRQYSKIVVISKAPLPNY 195
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 512 (185.3 bits), Expect = 1.8e-65, Sum P(2) = 1.8e-65
Identities = 132/356 (37%), Positives = 202/356 (56%)
Query: 193 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 246
S +I+D ++ + +NT LK+ R+ L+L+IMSA+ DA+ S+YF + V
Sbjct: 422 SCVIIDEAHERS-LNTDLLLALLKKLLSRRI-DLRLVIMSATADAKQLSQYFFSCGILLV 479
Query: 247 QGRQFPVEILYTLYPEPD---------YLDATLITIFQVHLDEAPGDILVFLTGQEEIE- 296
GR FPVEI+Y+ + Y+ + ++H E G IL FLT Q E+E
Sbjct: 480 NGRNFPVEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEW 539
Query: 297 SVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVT 356
+ ER + P A + +P+ L E+Q RVF G RKVI ATNIAETS+T
Sbjct: 540 ACERFIT------PSA----IALPLHGKLSFEEQFRVFQNHP-GRRKVIFATNIAETSLT 588
Query: 357 IPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENE 416
IPG+KYVID G VK Y+P GM L V +S++ A QR+GRAGR PG+C+RLY +N+
Sbjct: 589 IPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKND 648
Query: 417 FDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALT 476
FD + + +PEI+R +L +L++ ALGV++I F+F++ P +I +++ L LGA+
Sbjct: 649 FDSMNLNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVV 708
Query: 477 DDCKLSDPV--GHQMARLPLDPIYSKALIVAGQFNCLEEMLITVA-MLSVESIFFR 529
+ + + GH + +L L+P K ++ + +E ++ A M + SIF R
Sbjct: 709 EKNGVHELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCR 764
Score = 201 (75.8 bits), Expect = 1.8e-65, Sum P(2) = 1.8e-65
Identities = 51/156 (32%), Positives = 83/156 (53%)
Query: 31 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 90
R++ + LPI + +++++++ + I++++GETGSGK+TQL QFL +G ++
Sbjct: 296 RRECRRLEDGLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIV 355
Query: 91 GVTQPXXXXXXXXXXXXXEES-GVELGQRVGYSIRFDDRTSTSTRI----KEALLDPY-- 143
TQP EES G V + F S+++ LL Y
Sbjct: 356 -CTQPRKIAAMTLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMK 414
Query: 144 ---LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
LS S +I+DEAHER+++TD+LL LLKK+ + R
Sbjct: 415 DRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRR 450
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 558 (201.5 bits), Expect = 2.0e-65, Sum P(2) = 2.0e-65
Identities = 130/325 (40%), Positives = 202/325 (62%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----YLDATLITI 273
LK+++MSA+++ S +FG + GR +PV E L D Y+ A +
Sbjct: 127 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 186
Query: 274 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 326
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 187 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 246
Query: 327 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 386
++QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK ++P G++ L VV
Sbjct: 247 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 306
Query: 387 PISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGV 445
PISK++ALQRSGRAGR GKCFR+Y ++ +++ + D PEIKR +L++V+L LK L +
Sbjct: 307 PISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAI 366
Query: 446 DDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVA 505
D+I F +++ P+ I+++L+QL+ A+ ++ +G M PL P + A+I A
Sbjct: 367 HDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTR-LGLSMVEFPLPPHLTCAVIKA 425
Query: 506 GQFNCLEEMLITVA-MLSVESIFFR 529
+C E++L+ +A MLSVE++F R
Sbjct: 426 ASLDC-EDLLLPIAAMLSVENVFIR 449
Score = 126 (49.4 bits), Expect = 2.0e-65, Sum P(2) = 2.0e-65
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 135 IKEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 183
+K L DP L+++S II+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 78 LKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 126
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 350 (128.3 bits), Expect = 4.5e-65, Sum P(3) = 4.5e-65
Identities = 84/250 (33%), Positives = 129/250 (51%)
Query: 280 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 339
EA D F G ++ + V+ + P L +P++S L +Q RVF A
Sbjct: 541 EAFDDYEEFENGDGDLSDGK--VENSIGAPPADCEPLYCLPLYSLLSMGKQRRVFDETPA 598
Query: 340 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGR 399
G R +++TN+AETS+TIPG+KYVID GF K RLYD + G+ V IS+A QR+GR
Sbjct: 599 GMRLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGR 658
Query: 400 AGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSR 459
AGR G +RLY + PEI ++L LK++ + ++ F F P
Sbjct: 659 AGRISAGHAYRLYSSAVYQDFVKFADPEILSKPADQLVLHLKSMNIVKVVNFPFPSAPDE 718
Query: 460 ASIIKSLEQLFLLGALTDDCKLSDP------VGHQMARLPLDPIYSKALIVAGQFNCLEE 513
+ + ++L LGAL++ K +G +A PL P Y+K + +A Q N +
Sbjct: 719 QMLESAEKRLCRLGALSESTKNGKTEARITKLGKTLAVFPLAPSYAKFIAMADQHNLMSH 778
Query: 514 MLITVAMLSV 523
++ +++LSV
Sbjct: 779 AILLISLLSV 788
Score = 305 (112.4 bits), Expect = 4.5e-65, Sum P(3) = 4.5e-65
Identities = 66/162 (40%), Positives = 100/162 (61%)
Query: 30 RRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL 89
R ++I + R LPI + E R+VE + +N + ++ GETGSGKTTQ+PQFL+ AG+ +G+L
Sbjct: 225 RSKEIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGYASEGEL 284
Query: 90 IGVTQPXXXXXXXXXXXXXEESGVELGQ--RVGYSIRFDDRTSTSTRI---------KEA 138
IG+T+P + GVEL + V Y IR++ S +T I KE
Sbjct: 285 IGITEPRRVAAIAMA----QRVGVELAKPDEVSYQIRYEGTRSETTNILFMTDGVLMKEM 340
Query: 139 LLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSA 180
D L +YS I++DEAHER++++DVL+G+L ++ RSK+A
Sbjct: 341 EQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTA 382
Score = 125 (49.1 bits), Expect = 4.5e-65, Sum P(3) = 4.5e-65
Identities = 31/91 (34%), Positives = 50/91 (54%)
Query: 219 PLKLIIMSASLDARGFS--EYFGCA--KAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
PL+L+IMSA+L F+ + F K + V RQFPV + + DY+ +
Sbjct: 384 PLRLVIMSATLRLDDFTHKKLFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRKTC 443
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQER 305
++H PG ILVF+TGQ E++ + +++R
Sbjct: 444 RIHETLPPGAILVFVTGQHEVKQLITKLKKR 474
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 508 (183.9 bits), Expect = 5.6e-64, Sum P(2) = 5.6e-64
Identities = 132/357 (36%), Positives = 200/357 (56%)
Query: 193 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEY-FGCAKAVH 245
S +I+D ++ + +NT L++ R+ L+L+IMSA+ DA S+Y F C +H
Sbjct: 419 SCVIIDEAHERS-LNTDLLLALLRKLLSRRI-DLRLVIMSATADANQLSQYLFDCG-ILH 475
Query: 246 VQGRQFPVEILYTLYPEPD---------YLDATLITIFQVHLDEAPGDILVFLTGQEEIE 296
V GR FPVEI+Y+ + Y + ++H E G IL FLT Q E+E
Sbjct: 476 VNGRNFPVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVE 535
Query: 297 -SVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSV 355
+ ER V P A + +P+ L E+Q VF G RKVI ATNIAETS+
Sbjct: 536 WACERFVA------PSA----IALPLHGKLSFEEQFMVFQNYP-GRRKVIFATNIAETSL 584
Query: 356 TIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPEN 415
TIPG+KYVID G VK Y+P GM L V +S++ A QR+GRAGR PG+C+RLY +
Sbjct: 585 TIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKT 644
Query: 416 EFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGAL 475
+FD + + +PEI+R +L +L++ ALG+D+I F+F++ P +I +++ L LGA+
Sbjct: 645 DFDSMNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAV 704
Query: 476 TDDCKLSDPV--GHQMARLPLDPIYSKALIVAGQFNCLEEMLITVA-MLSVESIFFR 529
+ + + GH + +L L+P K ++ + +E ++ A M + SIF R
Sbjct: 705 VEKNGVLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCR 761
Score = 191 (72.3 bits), Expect = 5.6e-64, Sum P(2) = 5.6e-64
Identities = 49/146 (33%), Positives = 78/146 (53%)
Query: 41 LPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXX 100
LPI + +++++++ I++++GETGSGK+TQL QFL +G ++ TQP
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIV-CTQPRKIAA 361
Query: 101 XXXXXXXXEES-GVELGQRVGYSIRFDDRTSTSTRI----KEALLDPY-----LSRYSAI 150
EES G V + F S+++ LL Y LS S +
Sbjct: 362 MTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCV 421
Query: 151 IVDEAHERTVHTDVLLGLLKKVQNAR 176
I+DEAHER+++TD+LL LL+K+ + R
Sbjct: 422 IIDEAHERSLNTDLLLALLRKLLSRR 447
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 413 (150.4 bits), Expect = 6.4e-64, Sum P(3) = 6.4e-64
Identities = 106/268 (39%), Positives = 152/268 (56%)
Query: 282 PGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAG 340
PG +LVFL G EI+ + E+L R+ +R V P+ SSL +E+Q VF G
Sbjct: 890 PGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNR-CVVYPLHSSLSNEEQQAVFTRPQNG 948
Query: 341 FRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRA 400
K+I++TNIAETSVTI + YVID G +K + YD + MESL V +S+A ALQR GRA
Sbjct: 949 VTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLEDVWVSRANALQRKGRA 1008
Query: 401 GREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGVD-----DIIGFDFM 454
GR G CF L+ + F+ L PEI+R L + L++K L V D + +
Sbjct: 1009 GRVASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCLRVKVLEVFAERPLDSVFSQLI 1068
Query: 455 EKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEM 514
E P+ S+ + ++L LGALTD+ L+ P+G +A LP+D K +++ F CL+
Sbjct: 1069 EPPTEGSLEAAKQRLCALGALTDEESLT-PLGWHLACLPVDVRIGKLMLLGAIFRCLDPA 1127
Query: 515 LITVAMLSVESIFFRSPGEVRRGKKCNE 542
L A L+ +S F SP + R ++ NE
Sbjct: 1128 LTIAASLAFKSPFV-SPWDKR--EEANE 1152
Score = 208 (78.3 bits), Expect = 6.4e-64, Sum P(3) = 6.4e-64
Identities = 64/171 (37%), Positives = 85/171 (49%)
Query: 15 NPKLHSKPFFNDSSSRRQKILQ-QRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQ 73
N KL + F SSRR +Q QR+ LP + ++E + KN +L+I G TG GKTTQ
Sbjct: 556 NKKL-CREFKRKRSSRRYISMQEQRQKLPAWQKREAILECLVKNQVLVISGMTGCGKTTQ 614
Query: 74 LPQFLFHAGFCRDGKLIGV-----TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDR 128
+PQF+ F + G+ V TQP +E LG GY IR +
Sbjct: 615 IPQFILD-NFLQTGRPDRVANIICTQPRRISAIAVATRVAQERAEALGHSTGYQIRLETV 673
Query: 129 TSTSTRIK----EALL-----DPYLSRYSAIIVDEAHERTVHTDVLLGLLK 170
S+ TR+ LL DP LS + +IVDE HERT +D LL +LK
Sbjct: 674 RSSITRLMFCTTGVLLRRLEGDPELSGVTHVIVDEVHERTEESDFLLLVLK 724
Score = 101 (40.6 bits), Expect = 6.4e-64, Sum P(3) = 6.4e-64
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 216 KFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 254
K LK+I+MSA+L+A FS+YF +H+ GR FPVE
Sbjct: 729 KRTDLKVIMMSATLNAELFSQYFNNCPCIHIPGRTFPVE 767
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 404 (147.3 bits), Expect = 9.3e-64, Sum P(2) = 9.3e-64
Identities = 93/231 (40%), Positives = 134/231 (58%)
Query: 311 EASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVK 370
+ S L +P++S L EQQ +VF P AG R ++ATN+AETS+TIPGIKYV+D G VK
Sbjct: 575 DPSIPLYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVDCGRVK 634
Query: 371 ARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKR 430
R YD V G+ S V IS+A A QR+GRAGR PG C+RLY F ++ EI R
Sbjct: 635 KRFYDRVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFGDFSLFSEAEITR 694
Query: 431 CNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALT-----------DDC 479
+ +++LQ+K L ++ ++ F F PS ++I + E L LGAL +
Sbjct: 695 RPVEDLVLQMKDLNIEKVVNFPFPTPPSSEALIAAEELLISLGALEKPARHGRLSEMEKA 754
Query: 480 KLS---DPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 527
+LS P+G MA P+ P Y+K L + Q C++ ++ V+ ++V IF
Sbjct: 755 RLSCPISPLGRAMAAFPVAPRYAKMLALGRQQGCMQYIITIVSAMTVREIF 805
Score = 288 (106.4 bits), Expect = 9.3e-64, Sum P(2) = 9.3e-64
Identities = 62/158 (39%), Positives = 96/158 (60%)
Query: 30 RRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL 89
R +I + R LP+ + E+ ++E V+ ++ +++ GETGSGKTTQ+PQFL+ AGF G +
Sbjct: 241 RLPEIQEARLRLPVLAEEQIIMEAVKDHECVVLCGETGSGKTTQVPQFLYEAGFASSGGI 300
Query: 90 IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------ 140
IGVT+P E + G V Y IR++ + +T+IK + +L
Sbjct: 301 IGVTEPRRVAAISMSHRVATEMNLSSGV-VSYQIRYEGNVTENTKIKVMTDGVLLKEIQR 359
Query: 141 DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 178
D L +YS II+DEAHER+V+TD+L+GLL ++ R+K
Sbjct: 360 DFLLQKYSVIIIDEAHERSVYTDILIGLLSRIVPLRNK 397
Score = 145 (56.1 bits), Expect = 1.0e-48, Sum P(2) = 1.0e-48
Identities = 52/198 (26%), Positives = 89/198 (44%)
Query: 112 GVELGQRVGYSIRFDDRTSTSTRIKEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKK 171
GV +RV +I R +T + ++ Y RY + + + + VLL +++
Sbjct: 302 GVTEPRRVA-AISMSHRVATEMNLSSGVVS-YQIRYEGNVTENTKIKVMTDGVLLKEIQR 359
Query: 172 VQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDA 231
+ S +D+++ ++ + + +K P+KLIIMSA+L
Sbjct: 360 DFLLQKYSVIIIDEAHERSVYTDILIGL------LSRIVPLRNKKGLPMKLIIMSATLRV 413
Query: 232 RGFSE----YFGCAKAVHVQGRQFPVEILYTLY-PEPDYLDATLITIFQVHLDEAPGDIL 286
F+E + + V+ RQF V + + P DY T I ++H PG IL
Sbjct: 414 EDFTENKRLFSSPPPVIKVEARQFAVTVHFNKRTPMDDYTGETFRKICKIHRMLPPGGIL 473
Query: 287 VFLTGQEEIESVERLVQE 304
VFLTGQ E+ SV R +++
Sbjct: 474 VFLTGQAEVHSVCRRLRK 491
Score = 45 (20.9 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 283 GDILVFLTGQEEIESVERLVQERLLQLPEAS-RKLVTVPIFSSLPSEQQM 331
GD +F E E R V++ +LQ+ + + K+V P F + PS + +
Sbjct: 682 GDFSLF----SEAEITRRPVEDLVLQMKDLNIEKVVNFP-FPTPPSSEAL 726
Score = 37 (18.1 bits), Expect = 2.3e-37, Sum P(2) = 2.3e-37
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 144 LSRYSAIIVDEAHE 157
L YSA+ VDE E
Sbjct: 529 LDNYSALPVDEGDE 542
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 366 (133.9 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
Identities = 105/301 (34%), Positives = 155/301 (51%)
Query: 22 PFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHA 81
P F SR ++ + RK LPI +E+ ++E + ++ +II G+TG GKTTQ+PQFL+ A
Sbjct: 222 PAFVVHVSRPAEVEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEA 281
Query: 82 GF------CRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI 135
GF R G +IG+TQP E GV LG+ VG+ +R+D + ++ I
Sbjct: 282 GFGSKQFSSRSG-IIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSI 340
Query: 136 K---EALL------DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSXX 186
K + +L D L RYS II+DEAHER+++TD+L+G+L +V R + +
Sbjct: 341 KFMTDGILLREIQNDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKS 400
Query: 187 XXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGF---SEYF-GCAK 242
L G G T +CQ PLKLI+MSA+L F F
Sbjct: 401 ----------LQSG----GTVT-SECQ---ITPLKLILMSATLRVEDFVSGKRLFPNIPP 442
Query: 243 AVHVQGRQFPVEILYTLYPE-PDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESV-ER 300
+ V RQ+PV I ++ E DY+ + +H G ILVF+TGQ E++ + E+
Sbjct: 443 LIEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVMSIHKKLPQGGILVFVTGQREVDYLCEK 502
Query: 301 L 301
L
Sbjct: 503 L 503
Score = 356 (130.4 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
Identities = 81/194 (41%), Positives = 117/194 (60%)
Query: 315 KLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLY 374
KL +P+++ L Q+RVF R V++ATN+AETS+TIPGIKYV+D G VK + Y
Sbjct: 646 KLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNY 705
Query: 375 DPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKL-EDSTKPEIKRCNL 433
D GMES V IS+A A QR+GRAGR GPG C+RLY F + E+S+ PEI + +
Sbjct: 706 DSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKVPV 765
Query: 434 SNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLP 493
VIL +K++ + + F F P ++I ++ L L AL + L+ P+G M+ P
Sbjct: 766 DGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGGLT-PLGKAMSHYP 824
Query: 494 LDPIYSKALIVAGQ 507
+ P +S+ L+ Q
Sbjct: 825 MSPRHSRMLLTVIQ 838
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 410 (149.4 bits), Expect = 9.4e-63, Sum P(4) = 9.4e-63
Identities = 107/270 (39%), Positives = 150/270 (55%)
Query: 264 DYLDATLITIFQVHLDEA--PGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVP 320
D +D L+ H+D+ G IL+FL G EI + + L + P A L P
Sbjct: 895 DRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWLL---P 951
Query: 321 IFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGM 380
+ SS+ S +Q +VF G RKVI ATNIAETS+TI + YVID G K Y+P K +
Sbjct: 952 LHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKL 1011
Query: 381 ESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTK-PEIKRCNLSNVILQ 439
S++ IS+A A QR+GRAGR PG CF LY F+KL + PE+ R L + LQ
Sbjct: 1012 SSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQ 1071
Query: 440 LKALGVDDIIGF--DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPI 497
+K LG+ I F +E PS ++ ++ L +GA+ D +L+ P+GH +A+LP+D +
Sbjct: 1072 IKLLGLGHIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELT-PLGHHLAKLPVDVL 1130
Query: 498 YSKALIVAGQFNCLEEMLITVAMLSVESIF 527
K L+ G F CL +L A LS +S F
Sbjct: 1131 IGKMLLYGGIFGCLSPILSIAAFLSYKSPF 1160
Score = 193 (73.0 bits), Expect = 9.4e-63, Sum P(4) = 9.4e-63
Identities = 59/175 (33%), Positives = 89/175 (50%)
Query: 26 DSSSRRQK---ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLF--- 79
++ R QK +L+ R +LPI+ V+ +++ +++ D+L++ GETGSGKTTQ+PQF+
Sbjct: 596 ENKKRTQKYKDMLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDM 655
Query: 80 ----HAGFCRDGKLIGVTQPXXXXXXXXXXXXXEE---SGVELGQR-VGYSIRFDDRTST 131
H G+C I TQP +E S L VGY +R + S
Sbjct: 656 IDSGHGGYCN----IICTQPRRIAAISVAQRVADERCESSPGLDDSLVGYQVRLESARSD 711
Query: 132 STRI----KEALL-----DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
TR+ LL D L+ + IIVDE HER++ D LL +LK + +S
Sbjct: 712 KTRLLFCTTGILLRKLAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQS 766
Score = 93 (37.8 bits), Expect = 9.4e-63, Sum P(4) = 9.4e-63
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV--EILYTLYPEPDYL 266
LK+I+MSA++DA FS YFG + QGR PV L +Y +YL
Sbjct: 774 LKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEIYESINYL 822
Score = 40 (19.1 bits), Expect = 8.8e-15, Sum P(4) = 8.8e-15
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 412 YPENEFDKLEDSTKPEIKRCNLSNV---ILQLKALGVDDII--GFDFMEKPSRASIIKSL 466
Y + ++ D T+ +KR N + +L+ +DD G + P A I L
Sbjct: 873 YVSSNYNSYSDQTQQNLKRLNEDRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLL 932
Query: 467 EQL 469
+ L
Sbjct: 933 DML 935
Score = 37 (18.1 bits), Expect = 9.4e-63, Sum P(4) = 9.4e-63
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 536 RGKKCNEIFCKSRWRS 551
RG K + FC+S++ S
Sbjct: 1214 RGMKAAQRFCESKFLS 1229
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 411 (149.7 bits), Expect = 4.6e-61, Sum P(3) = 4.6e-61
Identities = 105/261 (40%), Positives = 148/261 (56%)
Query: 282 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGF 341
PG +L+FL G EI+ + +Q L S++ V P+ SSL SE+Q VF AG
Sbjct: 840 PGAVLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAGV 899
Query: 342 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 401
K+I++TNIAETSVTI + YVID G +K + YDP KGMESL +S+A ALQR GRAG
Sbjct: 900 IKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSRANALQRKGRAG 959
Query: 402 REGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKAL------GVDDIIGFDFM 454
R G CF L+ + ++ +L PEI+R L + L++K L + ++ +
Sbjct: 960 RVASGVCFHLFSSHHYNHQLIKQQLPEIQRVPLEQLCLRIKILEMFSAQSLHSVLS-RLI 1018
Query: 455 EKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEM 514
E P S+ S +L LGALT D KL+ P+G+ +A LP+D K ++ F CL+
Sbjct: 1019 EPPRTESLRASKLRLQDLGALTADEKLT-PLGYHLASLPVDVRIGKLMLFGTIFRCLDPA 1077
Query: 515 LITVAMLSVESIFFRSPGEVR 535
L A L+ +S F SP + R
Sbjct: 1078 LTIAASLAFKSPFV-SPWDKR 1097
Score = 195 (73.7 bits), Expect = 4.6e-61, Sum P(3) = 4.6e-61
Identities = 58/181 (32%), Positives = 86/181 (47%)
Query: 10 SNSTHNPKLH-SKPFFNDSSSRR-QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETG 67
S ST+N + F SSRR Q +L +R+ LP + +++ + + +L++ G TG
Sbjct: 504 SKSTYNENVKICMQFRLKKSSRRFQSMLHERQKLPAWQERETILDLLTSHQVLVVSGMTG 563
Query: 68 SGKTTQLPQFLFHAGFCRDGKLIG---VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIR 124
GKTTQ+PQF+ A + TQP +E +G VGY IR
Sbjct: 564 CGKTTQIPQFILDASLQGSPNAVANIICTQPRRISAISVAERVAKERTERVGVTVGYQIR 623
Query: 125 FDDRTSTSTRI----KEALL-----DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNA 175
+ S++TR+ LL D L + +IVDE HERT +D LL +LK +
Sbjct: 624 LESVKSSATRLLYCTTGVLLRRLEGDLTLQGITHVIVDEVHERTEESDFLLLVLKDIMVQ 683
Query: 176 R 176
R
Sbjct: 684 R 684
Score = 88 (36.0 bits), Expect = 4.6e-61, Sum P(3) = 4.6e-61
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 254
L++I+MSA+L+A FS+YF +++ GR FPV+
Sbjct: 687 LRIILMSATLNAELFSQYFHSCPIINIPGRTFPVD 721
Score = 43 (20.2 bits), Expect = 3.5e-45, Sum P(3) = 3.5e-45
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 16 PKLHSKPFFNDSSSRRQKILQQRKS--LPIASVEKRLVEEVRKNDIL 60
P+L ++ F ++ S+RR +QR +P+ ++ + R ++L
Sbjct: 71 PRLETRSFESNVSARRGGQTKQRPEAKMPLQTIHMTTENQRRVKELL 117
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 398 (145.2 bits), Expect = 5.0e-61, Sum P(3) = 5.0e-61
Identities = 103/256 (40%), Positives = 142/256 (55%)
Query: 282 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGF 341
PG ILVFL G EI+ + +Q L S + V P+ SSL SE+Q VF AG
Sbjct: 847 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGV 906
Query: 342 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 401
K+I++TNIAETS+TI + YVID G +K + YD KGMESL +S+A ALQR GRAG
Sbjct: 907 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAG 966
Query: 402 REGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFD-----FME 455
R G CF L+ + ++ +L PEI+R L + L++K L + +E
Sbjct: 967 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIE 1026
Query: 456 KPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEML 515
P S+ S +L LGALT D +L+ P+G+ +A LP+D K ++ F CL+ L
Sbjct: 1027 PPHTDSLRASKIRLRDLGALTPDERLT-PLGYHLASLPVDVRIGKLMLFGSIFRCLDPAL 1085
Query: 516 ITVAMLSVESIFFRSP 531
A L+ +S F SP
Sbjct: 1086 TIAASLAFKSPFV-SP 1100
Score = 210 (79.0 bits), Expect = 5.0e-61, Sum P(3) = 5.0e-61
Identities = 63/182 (34%), Positives = 91/182 (50%)
Query: 10 SNSTH--NPKLHSKPFFNDSSSRR-QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGET 66
+ S H N K+ K F +SR+ Q ILQ+R+SLP + ++ +RK+ +++I G T
Sbjct: 511 AKSVHAENGKI-CKQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMT 569
Query: 67 GSGKTTQLPQFLFHAGFCRDGKLIG---VTQPXXXXXXXXXXXXXEESGVELGQRVGYSI 123
G GKTTQ+PQF+ + + TQP +E +G VGY I
Sbjct: 570 GCGKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQI 629
Query: 124 RFDDRTSTSTRI----KEALL-----DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQN 174
R + S++TR+ LL D L S IIVDE HERT +D LL +LK + +
Sbjct: 630 RLESVKSSATRLLYCTTGVLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVS 689
Query: 175 AR 176
R
Sbjct: 690 QR 691
Score = 86 (35.3 bits), Expect = 5.0e-61, Sum P(3) = 5.0e-61
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 254
L++I+MSA+L+A FS+YF + + GR FPV+
Sbjct: 694 LQVILMSATLNAELFSDYFNSCPVITIPGRTFPVD 728
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 406 (148.0 bits), Expect = 6.8e-61, Sum P(3) = 6.8e-61
Identities = 106/263 (40%), Positives = 148/263 (56%)
Query: 266 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIF 322
+D L+ H+D+ G ILVFL G EI + RL + AS + +P+
Sbjct: 864 VDYDLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAAS--YRFRGASGDWL-LPLH 920
Query: 323 SSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMES 382
SS+ S +Q +VF G RKVI+ATNIAETS+TI + YVID G K Y+P K + S
Sbjct: 921 SSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSS 980
Query: 383 LLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTK-PEIKRCNLSNVILQLK 441
++ +SKA A QR GRAGR PG CF LY + F+KL + PE+ R L + L +K
Sbjct: 981 MVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIK 1040
Query: 442 ALGVDDIIGF--DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYS 499
LG+ I F +E PS ++I ++ L +GAL D +L+ P+GH +A+LP+D +
Sbjct: 1041 LLGLGQIKPFLSKALEPPSESAINSAILLLHKVGALEGDEELT-PLGHHLAKLPVDLLIG 1099
Query: 500 KALIVAGQFNCLEEMLITVAMLS 522
K L+ G F CL +L A LS
Sbjct: 1100 KMLLYGGIFGCLSPILSIAAFLS 1122
Score = 188 (71.2 bits), Expect = 6.8e-61, Sum P(3) = 6.8e-61
Identities = 55/172 (31%), Positives = 88/172 (51%)
Query: 25 NDSSSRRQK-ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLF---- 79
N ++ K +L+ R +LPI+ V+K +++++++ D+L++ GETGSGKTTQ+PQF+
Sbjct: 580 NKKKMQKYKDMLKTRAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMI 639
Query: 80 ---HAGFCRDGKLIGVTQPXXXXXXXXXXXXXEES--GVELGQRVGYSIRFDDRTSTSTR 134
H G+C I TQP E G + V Y +R + S TR
Sbjct: 640 DSGHGGYCN----IICTQPRAITVAQRVADERCEPPPGFD-NSVVAYQVRHQNARSDKTR 694
Query: 135 I---------KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
+ ++ + D L + IIVDE HER++ D LL +LK + +S
Sbjct: 695 LLFCTTGILLRKLVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQS 746
Score = 99 (39.9 bits), Expect = 6.8e-61, Sum P(3) = 6.8e-61
Identities = 25/62 (40%), Positives = 32/62 (51%)
Query: 210 KQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE--ILYTLYPEPDYLD 267
KQ LK+I+MSA++DA FS YFG + QGR PV L +Y YL
Sbjct: 744 KQSWDNALPKLKVILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYFLEDIYERTKYLL 803
Query: 268 AT 269
A+
Sbjct: 804 AS 805
Score = 37 (18.1 bits), Expect = 2.9e-37, Sum P(2) = 2.9e-37
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 255 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFL 289
+L L + D T I + +VH GD L+ +
Sbjct: 703 LLRKLVGDTTLKDVTHIIVDEVHERSLMGDFLLII 737
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 402 (146.6 bits), Expect = 8.3e-61, Sum P(3) = 8.3e-61
Identities = 102/282 (36%), Positives = 152/282 (53%)
Query: 262 EPDYLDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV 319
E D +D LI I + L+E G ILVFL G + I ++ L+ +++ S K + +
Sbjct: 380 EDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF---KSDKFLII 436
Query: 320 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 379
P+ S +P+ Q +VF G RK+++ATNIAETS+TI + YVID G +K +D
Sbjct: 437 PLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 496
Query: 380 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQ 439
+ ++ +SKA A QR GRAGR PG C+ LY L+D PEI R L + LQ
Sbjct: 497 ISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQ 556
Query: 440 LKALGVDDIIGF--DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPI 497
+K L + I F M+ PS +++ S+ L L AL +L+ P+G +ARLP++P
Sbjct: 557 IKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELT-PLGVHLARLPVEPH 615
Query: 498 YSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKK 539
K ++ F CL+ +L A LS F+ P + GK+
Sbjct: 616 IGKMILFGALFCCLDPVLTIAASLS-----FKDPFVIPLGKE 652
Score = 176 (67.0 bits), Expect = 8.3e-61, Sum P(3) = 8.3e-61
Identities = 51/156 (32%), Positives = 72/156 (46%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK----LIGVT 93
R+ LP ++K LV + + + +I GETG GKTTQ+ QF+ + GK I T
Sbjct: 118 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSACRIVCT 176
Query: 94 QPXXXXXXXXXXXXXEESGVELGQ--RVGYSIRFDDRT----------STSTRIKEALLD 141
QP E G GY IR R +T ++ D
Sbjct: 177 QPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD 236
Query: 142 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
PYLS S I++DE HER + +DVL+ ++K + N RS
Sbjct: 237 PYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRS 272
Score = 99 (39.9 bits), Expect = 8.3e-61, Sum P(3) = 8.3e-61
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 259
LK+I+MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 274 LKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 312
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 401 (146.2 bits), Expect = 3.4e-60, Sum P(3) = 3.4e-60
Identities = 104/256 (40%), Positives = 141/256 (55%)
Query: 282 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGF 341
PG ILVFL G EI+ + +Q L S + V P+ SSL SE+Q VF G
Sbjct: 843 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPVGV 902
Query: 342 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 401
K+I++TNIAETS+TI + YVID G +K + YD KGMESL +S+A ALQR GRAG
Sbjct: 903 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAG 962
Query: 402 REGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFD-----FME 455
R G CF L+ + F+ +L PEI+R L + L++K L + +E
Sbjct: 963 RVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIE 1022
Query: 456 KPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEML 515
P S+ S +L LGALT D KL+ P+G+ +A LP+D K ++ F CL+ L
Sbjct: 1023 PPHTDSLRASKIRLRDLGALTPDEKLT-PLGYHLASLPVDVRIGKLMLFGSIFRCLDPAL 1081
Query: 516 ITVAMLSVESIFFRSP 531
A L+ +S F SP
Sbjct: 1082 TIAASLAFKSPFV-SP 1096
Score = 196 (74.1 bits), Expect = 3.4e-60, Sum P(3) = 3.4e-60
Identities = 58/171 (33%), Positives = 86/171 (50%)
Query: 15 NPKLHSKPFFNDSSSRR-QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQ 73
N K+ K F +SR+ Q ILQ+R+SLP + +++ + ++ +L+I G TG GKTTQ
Sbjct: 514 NAKI-CKQFRIKQASRQFQSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCGKTTQ 572
Query: 74 LPQFLFHAGFCRDGKLIG---VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTS 130
+PQF+ + + TQP +E +G VGY IR + S
Sbjct: 573 IPQFILDDSLSGPPEKVANIICTQPRRISAISVAERVAKERTERVGLTVGYQIRLESVKS 632
Query: 131 TSTRI----KEALL-----DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
++TR+ LL D L + IIVDE HERT +D LL +LK +
Sbjct: 633 SATRLLYCTTGVLLRRLEGDTSLQGVTHIIVDEVHERTEESDFLLLVLKDI 683
Score = 89 (36.4 bits), Expect = 3.4e-60, Sum P(3) = 3.4e-60
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 254
L++I+MSA+L+A FSEYF + + GR FPV+
Sbjct: 690 LQVILMSATLNAELFSEYFSSCPVITIPGRTFPVD 724
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 402 (146.6 bits), Expect = 5.1e-60, Sum P(3) = 5.1e-60
Identities = 102/282 (36%), Positives = 152/282 (53%)
Query: 262 EPDYLDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV 319
E D +D LI I + L+E G ILVFL G + I ++ L+ +++ S K + +
Sbjct: 466 EDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF---KSDKFLII 522
Query: 320 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 379
P+ S +P+ Q +VF G RK+++ATNIAETS+TI + YVID G +K +D
Sbjct: 523 PLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 582
Query: 380 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQ 439
+ ++ +SKA A QR GRAGR PG C+ LY L+D PEI R L + LQ
Sbjct: 583 ISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQ 642
Query: 440 LKALGVDDIIGF--DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPI 497
+K L + I F M+ PS +++ S+ L L AL +L+ P+G +ARLP++P
Sbjct: 643 IKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELT-PLGVHLARLPVEPH 701
Query: 498 YSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKK 539
K ++ F CL+ +L A LS F+ P + GK+
Sbjct: 702 IGKMILFGALFCCLDPVLTIAASLS-----FKDPFVIPLGKE 738
Score = 176 (67.0 bits), Expect = 5.1e-60, Sum P(3) = 5.1e-60
Identities = 51/156 (32%), Positives = 72/156 (46%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK----LIGVT 93
R+ LP ++K LV + + + +I GETG GKTTQ+ QF+ + GK I T
Sbjct: 204 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSACRIVCT 262
Query: 94 QPXXXXXXXXXXXXXEESGVELGQ--RVGYSIRFDDRT----------STSTRIKEALLD 141
QP E G GY IR R +T ++ D
Sbjct: 263 QPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD 322
Query: 142 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
PYLS S I++DE HER + +DVL+ ++K + N RS
Sbjct: 323 PYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRS 358
Score = 99 (39.9 bits), Expect = 5.1e-60, Sum P(3) = 5.1e-60
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 259
LK+I+MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 360 LKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 398
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 393 (143.4 bits), Expect = 9.1e-60, Sum P(3) = 9.1e-60
Identities = 103/256 (40%), Positives = 140/256 (54%)
Query: 282 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGF 341
PG ILVFL G EI+ + +Q L S + V P+ SSL SE+Q VF G
Sbjct: 842 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPMGV 901
Query: 342 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 401
K+I++TNIAETS+TI + YVID G +K + YD KGMESL +S+A ALQR GRAG
Sbjct: 902 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAG 961
Query: 402 REGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFD-----FME 455
R G CF L+ + F+ +L PEI+R L + L++K L + +E
Sbjct: 962 RVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFARLIE 1021
Query: 456 KPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEML 515
P S+ S +L LGALT D L+ P+G+ +A LP+D K ++ F CL+ L
Sbjct: 1022 PPHADSLRASKIRLRDLGALTPDETLT-PLGYHLASLPVDVRIGKLMLFGSIFRCLDPAL 1080
Query: 516 ITVAMLSVESIFFRSP 531
A L+ +S F SP
Sbjct: 1081 TIAASLAFKSPFV-SP 1095
Score = 200 (75.5 bits), Expect = 9.1e-60, Sum P(3) = 9.1e-60
Identities = 59/178 (33%), Positives = 89/178 (50%)
Query: 10 SNSTH--NPKLHSKPFFNDSSSRR-QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGET 66
+ S H N K+ K F +SR+ Q +LQ+R+SLP + +++ + K+ +L++ G T
Sbjct: 504 AKSVHAENVKI-CKQFRIKQASRQFQSVLQERQSLPAWEERENILKLLSKHQVLVVSGMT 562
Query: 67 GSGKTTQLPQFLFHAGFCRDGKLIG---VTQPXXXXXXXXXXXXXEESGVELGQRVGYSI 123
G GKTTQ+PQF+ + + TQP +E +G VGY I
Sbjct: 563 GCGKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQI 622
Query: 124 RFDDRTSTSTRI----KEALL-----DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
R + S++TR+ LL D L + IIVDE HERT +D LL +LK +
Sbjct: 623 RLESVKSSATRLLYCTTGVLLRRLEGDTALQGVTHIIVDEVHERTEESDFLLLVLKDI 680
Score = 89 (36.4 bits), Expect = 9.1e-60, Sum P(3) = 9.1e-60
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 254
L++I+MSA+L+A FSEYF + + GR FPV+
Sbjct: 687 LQVILMSATLNAELFSEYFNSCPVITIPGRTFPVD 721
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 404 (147.3 bits), Expect = 1.1e-58, Sum P(3) = 1.1e-58
Identities = 103/291 (35%), Positives = 158/291 (54%)
Query: 253 VEILYTLYPEPDYLDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLP 310
V++L + + D +D LI I + L+E G ILVFL G + I ++ L+ +++
Sbjct: 452 VDVLQMM--DDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF-- 507
Query: 311 EASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVK 370
S K + +P+ S +P+ Q +VF G RK+++ATNIAETS+TI + YVID G +K
Sbjct: 508 -KSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIK 566
Query: 371 ARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKR 430
+D + ++ +SKA A QR GRAGR PG C+ LY L+D PEI R
Sbjct: 567 ETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILR 626
Query: 431 CNLSNVILQLKALGVDDIIGF--DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQ 488
L + LQ+K L + I F M+ PS +++ S++ L L AL +L+ P+G
Sbjct: 627 TPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELT-PLGVH 685
Query: 489 MARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKK 539
+ARLP++P K ++ F CL+ +L A LS F+ P + GK+
Sbjct: 686 LARLPVEPHIGKMILFGALFCCLDPVLTIAASLS-----FKDPFVIPLGKE 731
Score = 161 (61.7 bits), Expect = 1.1e-58, Sum P(3) = 1.1e-58
Identities = 49/156 (31%), Positives = 70/156 (44%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK----LIGVT 93
RK LP ++K LV + + + +I GETG GKTTQ+ QF+ + GK I T
Sbjct: 197 RKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSACRIVCT 255
Query: 94 QPXXXXXXXXXXXXXEESGVELGQ--RVGYSIRFDDRT----------STSTRIKEALLD 141
QP E G GY IR R +T ++ D
Sbjct: 256 QPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD 315
Query: 142 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
LS S I++DE HER + +DVL+ ++K + + RS
Sbjct: 316 SRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRS 351
Score = 99 (39.9 bits), Expect = 1.1e-58, Sum P(3) = 1.1e-58
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 259
LK+I+MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 353 LKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 391
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 396 (144.5 bits), Expect = 1.4e-58, Sum P(3) = 1.4e-58
Identities = 103/256 (40%), Positives = 142/256 (55%)
Query: 282 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGF 341
PG ILVFL G EI+ + +Q L S + V P+ SSL SE+Q VF G
Sbjct: 799 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGV 858
Query: 342 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 401
K+I++TNIAETS+TI + YVID G +K + YD KGMESL +S+A ALQR GRAG
Sbjct: 859 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAG 918
Query: 402 REGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFD-----FME 455
R G CF L+ + ++ +L PEI+R L + L++K L + +E
Sbjct: 919 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIE 978
Query: 456 KPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEML 515
P S+ S +L LGALT D KL+ P+G+ +A LP+D K +++ F CL+ L
Sbjct: 979 PPHVDSLRASKVRLRDLGALTPDEKLT-PLGYHLASLPVDVRIGKLMLLGSIFRCLDPAL 1037
Query: 516 ITVAMLSVESIFFRSP 531
A L+ +S F SP
Sbjct: 1038 TIAASLAFKSPFV-SP 1052
Score = 184 (69.8 bits), Expect = 1.4e-58, Sum P(3) = 1.4e-58
Identities = 56/176 (31%), Positives = 86/176 (48%)
Query: 15 NPKLHSKPFFNDSSSRR-QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQ 73
N K+ + F +SR+ ILQ+R+ LP + +++ + K+ +++I G TG GKTTQ
Sbjct: 469 NSKI-CRQFQMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQ 527
Query: 74 LPQFLFHAGFCRDGKLIG---VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTS 130
+PQF+ + + TQP +E +G VGY IR + S
Sbjct: 528 IPQFILDNSLNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKS 587
Query: 131 TSTRI----KEALL-----DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
++TR+ LL D L + IIVDE HERT +D LL +LK + R+
Sbjct: 588 SATRLLYCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRA 643
Score = 90 (36.7 bits), Expect = 1.4e-58, Sum P(3) = 1.4e-58
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 218 APLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 254
A L++I+MSA+LDA FS+YF + + GR FPV+
Sbjct: 643 ATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVD 679
Score = 39 (18.8 bits), Expect = 5.7e-14, Sum P(3) = 5.7e-14
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 278 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPE 311
L+E D+ + L Q+E ESV+ + ++ L +
Sbjct: 721 LEEVEEDLRLALHLQDEEESVKDTIPDQQLDFKQ 754
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 396 (144.5 bits), Expect = 1.7e-58, Sum P(3) = 1.7e-58
Identities = 103/256 (40%), Positives = 142/256 (55%)
Query: 282 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGF 341
PG ILVFL G EI+ + +Q L S + V P+ SSL SE+Q VF G
Sbjct: 852 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGV 911
Query: 342 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 401
K+I++TNIAETS+TI + YVID G +K + YD KGMESL +S+A ALQR GRAG
Sbjct: 912 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAG 971
Query: 402 REGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFD-----FME 455
R G CF L+ + ++ +L PEI+R L + L++K L + +E
Sbjct: 972 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIE 1031
Query: 456 KPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEML 515
P S+ S +L LGALT D KL+ P+G+ +A LP+D K +++ F CL+ L
Sbjct: 1032 PPHVDSLRASKVRLRDLGALTPDEKLT-PLGYHLASLPVDVRIGKLMLLGSIFRCLDPAL 1090
Query: 516 ITVAMLSVESIFFRSP 531
A L+ +S F SP
Sbjct: 1091 TIAASLAFKSPFV-SP 1105
Score = 184 (69.8 bits), Expect = 1.7e-58, Sum P(3) = 1.7e-58
Identities = 56/176 (31%), Positives = 86/176 (48%)
Query: 15 NPKLHSKPFFNDSSSRR-QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQ 73
N K+ + F +SR+ ILQ+R+ LP + +++ + K+ +++I G TG GKTTQ
Sbjct: 522 NSKI-CRQFQMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQ 580
Query: 74 LPQFLFHAGFCRDGKLIG---VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTS 130
+PQF+ + + TQP +E +G VGY IR + S
Sbjct: 581 IPQFILDNSLNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKS 640
Query: 131 TSTRI----KEALL-----DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
++TR+ LL D L + IIVDE HERT +D LL +LK + R+
Sbjct: 641 SATRLLYCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRA 696
Score = 90 (36.7 bits), Expect = 1.7e-58, Sum P(3) = 1.7e-58
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 218 APLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 254
A L++I+MSA+LDA FS+YF + + GR FPV+
Sbjct: 696 ATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVD 732
Score = 39 (18.8 bits), Expect = 6.6e-14, Sum P(3) = 6.6e-14
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 278 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPE 311
L+E D+ + L Q+E ESV+ + ++ L +
Sbjct: 774 LEEVEEDLRLALHLQDEEESVKDTIPDQQLDFKQ 807
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 401 (146.2 bits), Expect = 1.9e-58, Sum P(3) = 1.9e-58
Identities = 100/282 (35%), Positives = 153/282 (54%)
Query: 262 EPDYLDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV 319
+ + +D LI I + L+E G ILVFL G + I ++ L+ +++ S K + +
Sbjct: 468 DDEKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF---KSDKFIII 524
Query: 320 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 379
P+ S +P+ Q +VF G RK+++ATNIAETS+TI + YVID G +K +D
Sbjct: 525 PLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 584
Query: 380 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQ 439
+ ++ +SKA A QR GRAGR PG C+ LY L+D PEI R L + LQ
Sbjct: 585 ISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNSLRASLLDDYQLPEILRTPLEELCLQ 644
Query: 440 LKALGVDDIIGF--DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPI 497
+K L + I F M+ PS +++ S++ L L AL +L+ P+G +ARLP++P
Sbjct: 645 IKILRLGGIAHFLSRLMDPPSNEAVLLSIKHLMELNALDKQEELT-PLGVHLARLPVEPH 703
Query: 498 YSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKK 539
K ++ F CL+ +L A LS F+ P + GK+
Sbjct: 704 IGKMILFGALFCCLDPVLTIAASLS-----FKDPFVIPLGKE 740
Score = 163 (62.4 bits), Expect = 1.9e-58, Sum P(3) = 1.9e-58
Identities = 48/155 (30%), Positives = 71/155 (45%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK----LIGVT 93
R+ LP ++K LV + + + +I GETG GKTTQ+ QF+ + GK I T
Sbjct: 206 REKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSACRIVCT 264
Query: 94 QPXXXXXXXXXXXXXEESGVELGQ--RVGYSIRFDDRT----------STSTRIKEALLD 141
QP E G GY IR R +T ++ D
Sbjct: 265 QPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD 324
Query: 142 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
P+LS S I++DE HER + +DVL+ ++K + + R
Sbjct: 325 PHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYR 359
Score = 98 (39.6 bits), Expect = 1.9e-58, Sum P(3) = 1.9e-58
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 259
LK+++MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 362 LKVVLMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 400
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 395 (144.1 bits), Expect = 2.1e-58, Sum P(3) = 2.1e-58
Identities = 102/256 (39%), Positives = 142/256 (55%)
Query: 282 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGF 341
PG +LVFL G EI+ + +Q L S + V P+ SSL SE+Q VF G
Sbjct: 849 PGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGV 908
Query: 342 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 401
K+I++TNIAETS+TI + YVID G +K + YD KGMESL +S+A ALQR GRAG
Sbjct: 909 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAG 968
Query: 402 REGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFD-----FME 455
R G CF L+ + ++ +L PEI+R L + L++K L + +E
Sbjct: 969 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIE 1028
Query: 456 KPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEML 515
P S+ S +L LGALT D KL+ P+G+ +A LP+D K +++ F CL+ L
Sbjct: 1029 PPHIDSLRASKVRLRDLGALTPDEKLT-PLGYHLASLPVDVRIGKLMLLGSIFRCLDPAL 1087
Query: 516 ITVAMLSVESIFFRSP 531
A L+ +S F SP
Sbjct: 1088 TIAASLAFKSPFV-SP 1102
Score = 184 (69.8 bits), Expect = 2.1e-58, Sum P(3) = 2.1e-58
Identities = 56/176 (31%), Positives = 86/176 (48%)
Query: 15 NPKLHSKPFFNDSSSRR-QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQ 73
N K+ + F +SR+ ILQ+R+ LP + +++ + K+ +++I G TG GKTTQ
Sbjct: 519 NSKI-CRQFQMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQ 577
Query: 74 LPQFLFHAGFCRDGKLIG---VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTS 130
+PQF+ + + TQP +E +G VGY IR + S
Sbjct: 578 IPQFILDNSLNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKS 637
Query: 131 TSTRI----KEALL-----DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
++TR+ LL D L + IIVDE HERT +D LL +LK + R+
Sbjct: 638 SATRLLYCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRA 693
Score = 90 (36.7 bits), Expect = 2.1e-58, Sum P(3) = 2.1e-58
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 218 APLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 254
A L++I+MSA+LDA FS+YF + + GR FPV+
Sbjct: 693 ATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVD 729
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 140/344 (40%), Positives = 220/344 (63%)
Query: 214 GRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----YL- 266
GRK +K+++MSA+L+ SE+FG +H+ GR +PV EI L D Y+
Sbjct: 148 GRK-TEMKVVVMSATLEVDKLSEFFGHCSVLHIPGRSYPVKEIFCNLLSPRDTGSSAYVT 206
Query: 267 DATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL------LQLPEASRK-LVTV 319
+A +T+ +HL+E GDILVFLTGQ EIE L+ ++ ++ + S + L+ +
Sbjct: 207 EAVKVTL-DIHLNEPEGDILVFLTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLIL 265
Query: 320 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 379
P++ S+ ++QQ R+F PA G RK +++TNIA TS+TI G++YV+D GFVK ++P G
Sbjct: 266 PLYGSMSTDQQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVG 325
Query: 380 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVIL 438
++ L VVPISK++A+QR+GRAGR GK +RLY +++ + D T PEIKR +L++VIL
Sbjct: 326 LDILEVVPISKSEAMQRAGRAGRTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVIL 385
Query: 439 QLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDP--VGHQMARLPLDP 496
LK L V D+I F ++++P I+++L+QL+ A+ D + +G + + PL P
Sbjct: 386 TLKCLSVHDVIRFPYLDRPEERHILEALKQLYQCDAI-DRTRRGHVTRLGEFLVQFPLPP 444
Query: 497 IYSKALIVAGQFNCLEEMLITVA-MLSVESIFFRSPGEVRRGKK 539
S A+I A +C E+ML+ +A MLSVE++F R PG+ ++ K+
Sbjct: 445 NLSCAVIKAASLDC-EDMLLPIAAMLSVENVFIR-PGDPQKQKE 486
Score = 305 (112.4 bits), Expect = 4.0e-24, P = 4.0e-24
Identities = 81/208 (38%), Positives = 111/208 (53%)
Query: 41 LPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXX 100
LPI + LV V + LI+ GETGSGK+TQLP++L+ AG + G IGVTQP
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEAGLAQHGA-IGVTQPRRVAT 59
Query: 101 XXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSAII 151
EE G LG VGY +RFDD +S T IK L DP LS+YS II
Sbjct: 60 ISVAQRVAEEMGCALGSVVGYQVRFDDCSSEETAIKYMTDGCLLRHILADPLLSKYSIII 119
Query: 152 VDEAHERTVHTDVLLGLLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQ 211
+DEAHER++ TD+L GLLKK+ ++K + + + +D+ ++ G ++
Sbjct: 120 LDEAHERSLSTDILFGLLKKLF-LQNKPPGRKTEMKVVVMSATLEVDKLSEFFGHCSVLH 178
Query: 212 CQGRKFAPLKLIIMSASLDAR--GFSEY 237
GR + P+K I + L R G S Y
Sbjct: 179 IPGRSY-PVKEIFCNL-LSPRDTGSSAY 204
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 408 (148.7 bits), Expect = 5.8e-58, Sum P(3) = 5.8e-58
Identities = 105/299 (35%), Positives = 162/299 (54%)
Query: 256 LYTLYP---EPDYLDATLITIFQVHLD-EAPGDILVFLTGQEEIESVERLVQERLLQLPE 311
+Y + P P+ +++ L I + D G IL+FL G EI+SV + + L P
Sbjct: 722 IYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNALFSPR 781
Query: 312 ASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKA 371
A K + VP+ S+L E Q VF A G RK++L+TNIAETSVTI +V+D G +K
Sbjct: 782 AG-KFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKE 840
Query: 372 RLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKR 430
+ +D + MESL +V +S+A A QR GRAGR PG C LY + + PEI+R
Sbjct: 841 KCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQR 900
Query: 431 CNLSNVILQLKALGV----DDI-IGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPV 485
L ++L++K L + + + + +E P+ S++ +L +L +GAL + +L+ P+
Sbjct: 901 VPLEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLT-PL 959
Query: 486 GHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIF 544
GH +A LP+D K ++ F CL+ +L A LS +S F + KC +F
Sbjct: 960 GHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMF 1018
Score = 152 (58.6 bits), Expect = 5.8e-58, Sum P(3) = 5.8e-58
Identities = 40/116 (34%), Positives = 59/116 (50%)
Query: 30 RRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL 89
R QKI+ RK LP + +R++ + + +++I GETG GK+TQ+PQF+ F R +L
Sbjct: 442 RYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQL 501
Query: 90 ----------IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI 135
I TQP E +GQ VGY IR +++ S STR+
Sbjct: 502 PAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRL 557
Score = 114 (45.2 bits), Expect = 1.1e-45, Sum P(2) = 1.1e-45
Identities = 33/93 (35%), Positives = 44/93 (47%)
Query: 93 TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKEA----LL-----DPY 143
TQP E +GQ VGY IR +++ S STR+ LL DP
Sbjct: 515 TQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASDPL 574
Query: 144 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
L + +IVDE HER+ +D LL +LK + R
Sbjct: 575 LGSVTHVIVDEVHERSEESDFLLLILKNLLRER 607
Score = 103 (41.3 bits), Expect = 5.8e-58, Sum P(3) = 5.8e-58
Identities = 23/64 (35%), Positives = 41/64 (64%)
Query: 194 DMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 253
D + +R +++ + + + R+ LK+I+MSA+L+A FS+YFG A + + GR FPV
Sbjct: 584 DEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPV 643
Query: 254 EILY 257
+ L+
Sbjct: 644 QQLF 647
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 394 (143.8 bits), Expect = 1.6e-57, Sum P(3) = 1.6e-57
Identities = 101/282 (35%), Positives = 153/282 (54%)
Query: 262 EPDYLDATLITIFQVH--LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV 319
+ D +D LI H L+E G ILVFL G + I ++ L+ +++ ++ R L+ +
Sbjct: 580 DDDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF--KSDRFLI-I 636
Query: 320 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 379
P+ S +P+ Q +VF G RK+++ATNIAETS+TI + YVID G +K +D
Sbjct: 637 PLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 696
Query: 380 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQ 439
+ ++ +SKA A QR GRAGR PG C+ LY L+D PEI R L + LQ
Sbjct: 697 ISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQ 756
Query: 440 LKALGVDDIIGF--DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPI 497
+K L + I F M+ PS ++ S++ L L AL +L+ P+G +ARLP++P
Sbjct: 757 IKILRLGGIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELT-PLGVHLARLPVEPH 815
Query: 498 YSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKK 539
K ++ F CL+ +L A LS F+ P + GK+
Sbjct: 816 IGKMILFGALFCCLDPVLTIAASLS-----FKDPFVIPLGKE 852
Score = 160 (61.4 bits), Expect = 1.6e-57, Sum P(3) = 1.6e-57
Identities = 48/155 (30%), Positives = 70/155 (45%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK----LIGVT 93
R+ LP ++K LV + + + +I GETG GKTTQ+ QF+ + GK I T
Sbjct: 318 REKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD-DYIERGKGSACRIVCT 376
Query: 94 QPXXXXXXXXXXXXXEESGVELGQ--RVGYSIRFDDRT----------STSTRIKEALLD 141
QP E G GY IR R +T ++ D
Sbjct: 377 QPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD 436
Query: 142 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
+LS S I++DE HER + +DVL+ ++K + N R
Sbjct: 437 SHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFR 471
Score = 102 (41.0 bits), Expect = 1.6e-57, Sum P(3) = 1.6e-57
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 217 FAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 259
F P LK+I+MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 470 FRPDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 512
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 398 (145.2 bits), Expect = 1.6e-57, Sum P(3) = 1.6e-57
Identities = 101/282 (35%), Positives = 155/282 (54%)
Query: 262 EPDYLDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV 319
+ D +D LI I + L+E G ILVFL G + I ++ L+ +++ ++ R L+ +
Sbjct: 458 DDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF--KSDRFLI-I 514
Query: 320 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 379
P+ S +P+ Q +VF G RK+++ATNIAETS+TI + YVID G +K +D
Sbjct: 515 PLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 574
Query: 380 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQ 439
+ ++ +SKA A QR GRAGR PG C+ LY L+D PEI R L + LQ
Sbjct: 575 ISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQ 634
Query: 440 LKALGVDDIIGF--DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPI 497
+K L + I F M+ PS +++ S++ L L AL +L+ P+G +ARLP++P
Sbjct: 635 IKILRLGGIAYFLSRLMDPPSDEAVVLSIKHLMELSALDKQEELT-PLGVHLARLPVEPH 693
Query: 498 YSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKK 539
K ++ F CL+ +L A LS F+ P + GK+
Sbjct: 694 IGKMILFGALFCCLDPVLTIAASLS-----FKDPFVIPLGKE 730
Score = 156 (60.0 bits), Expect = 1.6e-57, Sum P(3) = 1.6e-57
Identities = 48/155 (30%), Positives = 69/155 (44%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRD-GKLIGV--TQ 94
RK LP ++K LV + + + +I GETG GKTTQ+ QF+ R G + TQ
Sbjct: 196 RKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGIGSACRIVCTQ 255
Query: 95 PXXXXXXXXXXXXXEESGVELGQ--RVGYSIRFDDRT----------STSTRIKEALLDP 142
P E G GY IR R +T ++ D
Sbjct: 256 PRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDS 315
Query: 143 YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
LS S I++DE HER + +DVL+ ++K + + RS
Sbjct: 316 RLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRS 350
Score = 99 (39.9 bits), Expect = 1.6e-57, Sum P(3) = 1.6e-57
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 259
LK+I+MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 352 LKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 390
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 380 (138.8 bits), Expect = 7.9e-57, Sum P(3) = 7.9e-57
Identities = 99/284 (34%), Positives = 152/284 (53%)
Query: 273 IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV-PIFSSLPSEQQM 331
++ + +E G ILVFL G ++I + ++ + + R + V P+ S + S +Q
Sbjct: 413 VYYICENEPEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSLMQSGEQQ 472
Query: 332 RVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKA 391
VF AG RKVI++T IAETSVTI + YVI+ G KA YD ++SL V ++KA
Sbjct: 473 AVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKA 532
Query: 392 QALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGF 451
QR GRAGR PG C+ L+ D+++D PEI R L ++IL LK L +DD F
Sbjct: 533 NTQQRRGRAGRVRPGICYNLFSRAREDRMDDIPTPEILRSKLESIILSLKLLHIDDPYRF 592
Query: 452 --DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFN 509
+ P+ +I +E L + AL L+ P+G +A+LP+DP K ++++ F
Sbjct: 593 LQTLINAPNPEAIKMGVELLKRIEALDQTGTLT-PLGMHLAKLPIDPQMGKMILMSALFC 651
Query: 510 CLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIFCKSRWRSPH 553
CL+ + A LS +S F+ G+ R + ++ RS H
Sbjct: 652 CLDPITSAAAALSFKSPFYSPLGKESRVDEIKRRMARNM-RSDH 694
Score = 221 (82.9 bits), Expect = 7.9e-57, Sum P(3) = 7.9e-57
Identities = 54/154 (35%), Positives = 76/154 (49%)
Query: 32 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGF---CRDGK 88
+K L+ RK LP +++ VR+N +++IVG TG GKTTQ+PQ L C
Sbjct: 144 KKRLEARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSC 203
Query: 89 LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTS----------TSTRIKEA 138
I TQP E LG VGY IR + R + T +++
Sbjct: 204 RIICTQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQL 263
Query: 139 LLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
DP + S +I+DE HER+V TD+L+GLLK +
Sbjct: 264 QSDPLMHNLSVLILDEIHERSVETDLLMGLLKVI 297
Score = 80 (33.2 bits), Expect = 7.9e-57, Sum P(3) = 7.9e-57
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
LK+I+MSA++ + F +YF ++G FPV++LY
Sbjct: 304 LKVILMSATVREQDFCDYFNNCPMFRIEGVMFPVKMLY 341
Score = 41 (19.5 bits), Expect = 4.4e-33, Sum P(2) = 4.4e-33
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 128 RTSTSTRIK-EALLDPYLSR----YSAIIVDE 154
R R+K EA+++PYL R Y + ++D+
Sbjct: 363 RDPPERRMKHEAMIEPYLRRIRNSYDSRVLDK 394
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 382 (139.5 bits), Expect = 1.3e-56, Sum P(3) = 1.3e-56
Identities = 98/267 (36%), Positives = 143/267 (53%)
Query: 264 DYLDATLITIFQVHLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIF 322
D ++AT+ I ++ E G ILVFLTG +EI + E++ L S K + +P+
Sbjct: 488 DLVEATIEHICRL---EGGGAILVFLTGWDEISKLLEKINMNNFLG---DSSKFLVLPLH 541
Query: 323 SSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMES 382
S+P+ Q +F RK++LATNIAE+S+TI + YV+D G K YD + +
Sbjct: 542 GSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVAC 601
Query: 383 LLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKA 442
LL ISKA A QR GRAGR G C+RLYP+ +D PEI R L + L +K+
Sbjct: 602 LLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIKS 661
Query: 443 LGVDDIIGF--DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSK 500
L V I F ++ P ++ ++E L +GAL D +L+ P+G + LP+DP K
Sbjct: 662 LQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELT-PLGRHLCTLPVDPNIGK 720
Query: 501 ALIVAGQFNCLEEMLITVAMLSVESIF 527
L++ F C+ L A L+ S F
Sbjct: 721 MLLIGAIFQCVNPALTIAAALAYRSPF 747
Score = 203 (76.5 bits), Expect = 1.3e-56, Sum P(3) = 1.3e-56
Identities = 49/146 (33%), Positives = 74/146 (50%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCR----DGKLIGVT 93
R+ LP +++ + V +N +L++ GETG GKTTQLPQF+ D +I T
Sbjct: 225 REKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNII-CT 283
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI---------KEALLDPYL 144
QP E G +G+ VGY IR + + S TR+ + + DP L
Sbjct: 284 QPRRISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNL 343
Query: 145 SRYSAIIVDEAHERTVHTDVLLGLLK 170
+ S ++VDE HER ++ D LL +L+
Sbjct: 344 TNVSHLLVDEIHERGMNEDFLLIILR 369
Score = 94 (38.1 bits), Expect = 1.3e-56, Sum P(3) = 1.3e-56
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 194 DMILDRG-NDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFP 252
D I +RG N+ + L+ R+ L+LI+MSA+++A FS YFG + +H+ G FP
Sbjct: 352 DEIHERGMNEDFLLIILRDLLPRR-PDLRLILMSATINADMFSTYFGNSPTMHIPGFTFP 410
Query: 253 VEILY 257
V L+
Sbjct: 411 VAELF 415
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 393 (143.4 bits), Expect = 8.0e-56, Sum P(2) = 8.0e-56
Identities = 106/335 (31%), Positives = 176/335 (52%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LKLI+ + L S Y+G + V+ + PVE++Y + D ++ + IF++H
Sbjct: 211 LKLIVNCSPLLTSKLSSYYGDVPVIEVRNKH-PVEVVYLSGAQKDSFESVIRLIFEIHRS 269
Query: 280 EAPGDILVFLTGQEEIESVERLV-QERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPA- 337
GD++VFL +++IE LV QE P+ LV +P++ P E+ +F P
Sbjct: 270 GEKGDVVVFLACEQDIEKTYELVCQEGSNLNPDVG-DLVVIPLY---PKEK-CSLFRPVD 324
Query: 338 ------AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKA 391
R+V+L T+ E+ + +K+VID G + ++Y+P SL++ PIS++
Sbjct: 325 ETEKRCQVYQRRVVLTTSCGESLIWSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQS 384
Query: 392 QALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKP-EIKRCNLSNVILQLKALGVDDIIG 450
QA R G GK F LY E K KP E++ NL++++L +K + + +
Sbjct: 385 QAEIRKQLLGSSPSGKLFCLYTEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGR 444
Query: 451 FDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNC 510
DFM +P+ S++++LE L L AL +D LS+ G M+ PLDP SK+++ + +F+C
Sbjct: 445 CDFMNRPAPESLMQALEDLDYLAALDNDGNLSE-FGIIMSEFPLDPQLSKSILASCEFDC 503
Query: 511 LEEMLITVAMLSVESIFFRSP-GEVRRGKKCNEIF 544
++EML AM++ S F P G C + F
Sbjct: 504 VDEMLTIAAMVTAPSCFLHVPHGAEEAAVTCWKTF 538
Score = 215 (80.7 bits), Expect = 8.0e-56, Sum P(2) = 8.0e-56
Identities = 55/163 (33%), Positives = 90/163 (55%)
Query: 28 SSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFC--- 84
SSR K+L++R+ LPI + +E + +N ++++ G++ GK++Q+PQ+ A +C
Sbjct: 49 SSRYYKLLKEREELPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWC--AEYCLSI 106
Query: 85 --RDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK------ 136
+ G +I TQ +E V +G VGY I F++ +T T ++
Sbjct: 107 HYQHGGVI-CTQAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDM 165
Query: 137 ---EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
E + +P+L Y II+D+ HER++ TDVLLGLLK V AR
Sbjct: 166 LQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLAR 208
Score = 39 (18.8 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 310 PEASRKLVTVPIFSSLPSEQQMRVFAPAA 338
PE +LV FS+LP + + AA
Sbjct: 687 PELFMQLVPQYYFSNLPPSESKDILQQAA 715
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 327 (120.2 bits), Expect = 8.8e-56, Sum P(2) = 8.8e-56
Identities = 71/166 (42%), Positives = 97/166 (58%)
Query: 20 SKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLF 79
S P + + +++ I R+SLP+ + L+ + + +LII GETGSGKTTQ+PQ+LF
Sbjct: 378 SAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLF 437
Query: 80 HAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTST--R--- 134
G+ G I TQP E GV+LG VGYSIRF+D TS T R
Sbjct: 438 EEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMT 497
Query: 135 ----IKEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
++E L +P L+ YS ++VDEAHERT+HTD+L GL+K V R
Sbjct: 498 DGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 543
Score = 318 (117.0 bits), Expect = 8.8e-56, Sum P(2) = 8.8e-56
Identities = 59/129 (45%), Positives = 90/129 (69%)
Query: 216 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+F P LK+++ SA++D FS +F A + GR+FPV+I YT PE DYL+A ++++
Sbjct: 541 RFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVL 600
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q R+F
Sbjct: 601 QIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIF 660
Query: 335 APAAAGFRK 343
P G RK
Sbjct: 661 QPTPPGARK 669
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 384 (140.2 bits), Expect = 1.4e-55, Sum P(3) = 1.4e-55
Identities = 95/269 (35%), Positives = 150/269 (55%)
Query: 263 PDYLDATLITIFQVHL--DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVP 320
PD + LI H+ E PG +LVFLTG ++I S+ ++ L L + +R L+ +
Sbjct: 518 PDCIGFNLIEAVLCHICRKERPGAVLVFLTGWDDIRSLSDQIKAHPL-LGDPNRVLLLM- 575
Query: 321 IFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGM 380
S+ + +Q +F A RK++LATN+AE S+TI + +V+D G K YD +
Sbjct: 576 CHGSMATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNT 635
Query: 381 ESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQL 440
LL IS+A A QR GRAGR PG+C+ LYP+ +D + PE+ R L+++ LQ+
Sbjct: 636 PCLLPSWISQASARQRRGRAGRLFPGECYHLYPKCVYDAFAEYQLPELLRTPLNSLCLQI 695
Query: 441 KALGVDDIIGF--DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIY 498
K+L V+ I F ++ P ++ ++ L ++GAL + L+D +G ++ LP+DP
Sbjct: 696 KSLQVESIAEFLSAALQAPESLAVQNAIGFLKMIGALDEKENLTD-LGKLLSILPVDPKL 754
Query: 499 SKALIVAGQFNCLEEMLITVAMLSVESIF 527
K LI+ F C + +L V+ LSV F
Sbjct: 755 GKMLIMGAIFRCFDPILTIVSGLSVRDPF 783
Score = 188 (71.2 bits), Expect = 1.4e-55, Sum P(3) = 1.4e-55
Identities = 46/157 (29%), Positives = 80/157 (50%)
Query: 28 SSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGF-CRD 86
S + +L+ RK+LP ++RL++ + +N ++++ GETG GKTTQLPQ++ +
Sbjct: 247 SPEGRTMLEFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGR 306
Query: 87 GKLIGV--TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI--------- 135
G + TQP E G LG+ VG+ +R + +T +
Sbjct: 307 GAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILL 366
Query: 136 KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
+ L D L+ + + VDE HER ++ D L+ +LK++
Sbjct: 367 RRLLSDRNLNGVTHVFVDEIHERGMNEDFLIIVLKEL 403
Score = 98 (39.6 bits), Expect = 1.4e-55, Sum P(3) = 1.4e-55
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 194 DMILDRG-NDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFP 252
D I +RG N+ I LK+ R+ L+L++MSA+L+A FS Y+G A +H+ G P
Sbjct: 384 DEIHERGMNEDFLIIVLKELLPRR-PDLRLVLMSATLNAELFSNYYGGAPTIHIPGFTHP 442
Query: 253 VE 254
V+
Sbjct: 443 VK 444
Score = 37 (18.1 bits), Expect = 5.2e-33, Sum P(2) = 5.2e-33
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 47 EKRLVEEVRKNDILIIVGE 65
+K+L+ RKN I +V E
Sbjct: 477 QKQLMPRKRKNQITTLVEE 495
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 385 (140.6 bits), Expect = 1.1e-54, Sum P(3) = 1.1e-54
Identities = 107/337 (31%), Positives = 179/337 (53%)
Query: 229 LDARGFSEYFGC-AKAVHVQGRQFPVEILYTLYPEPDY-LDATLITIFQVHLDEAPGDIL 286
++A+ + E + C A+ + + +E+L + + + L+ T I + ++E G IL
Sbjct: 448 IEAK-YHESWPCYARTLRDRFSDTTIEVLGMMDDDDNIDLELTAALIRHIAVNENEGAIL 506
Query: 287 VFLTGQEEIESVERLVQERLLQLPEASR-KLVTVPIFSSLP--SEQQM-----RVFAPAA 338
VFL G + I ++ L+ Q+ ++ R + + +P+ S +P S+ Q+ +VF
Sbjct: 507 VFLPGWDNISTLNDLLMSD--QMFKSGRYRFIIIPLHSLMPTVSQTQVISLFPQVFKKPP 564
Query: 339 AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSG 398
G RK+++ATNIAETS+TI + YVID G +K +D + ++ +S A A QR G
Sbjct: 565 PGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIRTMTAEWVSIANAKQRKG 624
Query: 399 RAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGF--DFMEK 456
RAGR PGKC+ LY L++ PEI+R L + LQ+K L + I F M+
Sbjct: 625 RAGRVSPGKCYHLYNGLRASLLDNYQLPEIQRTPLEELCLQIKVLKLGPIATFLQKTMDP 684
Query: 457 PSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLI 516
PS +I ++ L L AL D KL+ P+G +AR+P++P K ++ CL+ +L
Sbjct: 685 PSDRAIELAITHLVDLNALDRDEKLT-PLGFHLARMPVEPHIGKMILFGALLGCLDPVLT 743
Query: 517 TVAMLSVESIFFRSPGEVRRGKKCNEIFCKSRWRSPH 553
A LS + FF G+ + + ++F ++ RS H
Sbjct: 744 IAASLSFKDPFFIPLGKEKIADQRRKMFSQNS-RSDH 779
Score = 185 (70.2 bits), Expect = 1.1e-54, Sum P(3) = 1.1e-54
Identities = 52/159 (32%), Positives = 78/159 (49%)
Query: 33 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCR-DGKLIG 91
++L+ RK LP + + LV + N +L+I GETG GKTTQ+ QF+ R G L
Sbjct: 212 EMLKFRKKLPSYGMREELVRLISANRVLVISGETGCGKTTQVTQFILDDFIQRGQGSLCR 271
Query: 92 V--TQPXXXXXXXXXXXXXEESGVELGQ--RVGYSIRFDDRT----------STSTRIKE 137
V TQP E +G+ GY IR R +T ++
Sbjct: 272 VVCTQPRRISAISVAERVAVERAEPVGEGKSCGYQIRLQSRLPRKQGSLLYCTTGVILQW 331
Query: 138 ALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
DPYLS + +++DE HER+V +D+L+ ++K + AR
Sbjct: 332 LHSDPYLSSITHLVLDEIHERSVQSDILITIVKDLLTAR 370
Score = 88 (36.0 bits), Expect = 1.1e-54, Sum P(3) = 1.1e-54
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 253
LK+++MSA+L+A FS+YF +H+ G FPV
Sbjct: 373 LKVVLMSATLNAEKFSKYFNNCPMIHIPGYTFPV 406
>TIGR_CMR|GSU_1838 [details] [associations]
symbol:GSU_1838 "ATP-dependent helicase HrpB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
HOGENOM:HOG000244610 RefSeq:NP_952888.1 ProteinModelPortal:Q74C37
DNASU:2688652 GeneID:2688652 KEGG:gsu:GSU1838 PATRIC:22026533
ProtClustDB:CLSK828597 BioCyc:GSUL243231:GH27-1781-MONOMER
Uniprot:Q74C37
Length = 846
Score = 409 (149.0 bits), Expect = 1.7e-54, Sum P(2) = 1.7e-54
Identities = 107/313 (34%), Positives = 164/313 (52%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
L++I+MSA++ A + G A + +GR +PV + + + + L + + ++ +
Sbjct: 151 LRIIVMSATMAAAPVAALLGDAPVITSEGRNYPVALRHIPPNDRENLPSAVARAVRIAVR 210
Query: 280 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 339
E GDIL FL G EI +L+ + P LV VP++ LP +Q R P
Sbjct: 211 ECEGDILAFLPGVGEIRRCGQLLADD----PPLHAPLV-VPLYGDLPFVEQERAILPVP- 264
Query: 340 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGR 399
G RKV+LAT IAETS+TI G++ V+D G + YDP G+ L+ +S A A QR+GR
Sbjct: 265 GRRKVVLATTIAETSLTIEGVRVVVDGGQTRRLRYDPASGLNRLVTERVSAASATQRAGR 324
Query: 400 AGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSR 459
AGR GPG C+RL+PE++ L + PEI +L+ + L L GV D +++ P R
Sbjct: 325 AGRLGPGTCYRLWPEHDQQALLAADPPEILIADLAPLALDLAHWGVSDPASLAWLDPPPR 384
Query: 460 ASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVA 519
++ ++ L L AL +++ G +MA LPL P + L+ A + + VA
Sbjct: 385 GALEEARNLLKSLDALDGQGMITE-TGRRMAELPLHPRLAHMLLRATERGPAP-LACDVA 442
Query: 520 MLSVESIFFRSPG 532
L E RS G
Sbjct: 443 ALLTERDIVRSAG 455
Score = 189 (71.6 bits), Expect = 1.7e-54, Sum P(2) = 1.7e-54
Identities = 48/142 (33%), Positives = 72/142 (50%)
Query: 41 LPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXX 100
LP+ V L+ + + + ++ G+GKTT++P L A + +GK I + +P
Sbjct: 4 LPVDDVIPDLLTALEQRNAAVLQAPPGAGKTTRVPLALLDAPWL-NGKRIIMLEPRRLAA 62
Query: 101 XXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPYLSRYSAII 151
G E G VGY+IRFD R S TR++ E +L DP L A+I
Sbjct: 63 TNAARWMARSLGEEAGATVGYAIRFDRRVSARTRVEVVTEGILTRRLQSDPLLEGVGAVI 122
Query: 152 VDEAHERTVHTDVLLGLLKKVQ 173
DE HER++H+D+ L L + VQ
Sbjct: 123 FDEFHERSIHSDLALALCRDVQ 144
Score = 40 (19.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 236 EYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDAT 269
E FGCA V + PV +++ L P L T
Sbjct: 768 EMFGCADTPAVAWGRVPV-VVHLLSPAGRPLQVT 800
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 393 (143.4 bits), Expect = 4.1e-54, Sum P(2) = 4.1e-54
Identities = 103/298 (34%), Positives = 162/298 (54%)
Query: 263 PDYLDATLITIFQVHL--DEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTV 319
PD + LI ++ +E PG IL+FLTG ++I S+ E+L + P+ ++ +
Sbjct: 477 PDCIGFNLIEFLLCNICENEGPGGILIFLTGWDDISSLKEKLQIHPIFGNPDL---VMLL 533
Query: 320 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 379
S+ + +Q +F A+G RK++LATNIAETS+TI + +VID G K YD +
Sbjct: 534 ACHGSMETFEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNN 593
Query: 380 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQ 439
LL ISK A QR GRAGR PG+C+ LYP+ +D + PEI R L ++ LQ
Sbjct: 594 TPCLLPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQ 653
Query: 440 LKALGVDDIIGF--DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPI 497
+K+L + I F ++ P ++ K++ L ++GAL ++ L+ +G +++LP++P
Sbjct: 654 IKSLNLGSISEFLSRALQSPELLAVQKAIAFLKIIGALDENEDLTT-LGRYLSKLPMEPK 712
Query: 498 YSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIFCKSRWRSPHFD 555
K LI+ CL+ +L A LSV F +P + KK KS++ H D
Sbjct: 713 LGKMLILGAILGCLDPILTVAAGLSVRDPFL-TPQD----KKDLAEAAKSQFSRDHSD 765
Score = 207 (77.9 bits), Expect = 4.1e-54, Sum P(2) = 4.1e-54
Identities = 53/174 (30%), Positives = 85/174 (48%)
Query: 17 KLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQ 76
+L + + +S Q++L R SLP ++ + +N +++I GETG GKTTQ+PQ
Sbjct: 196 QLRDRQQYWQASVEGQRMLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQ 255
Query: 77 FLFHAGF-CRDGKLIGV--TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTST 133
F+ + G + TQP E G +LG+ VGY +R + T
Sbjct: 256 FILESEIEANRGAFSSIICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDT 315
Query: 134 RI---------KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 178
R+ + L+D L + +IVDE HER ++ D LL +LK + + RS+
Sbjct: 316 RLLFCTTGILLRRLLVDRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSE 369
Score = 105 (42.0 bits), Expect = 2.2e-43, Sum P(2) = 2.2e-43
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 194 DMILDRG-NDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFP 252
D I +RG N+ + LK R+ + LKLI+MSA+LDA FS YFG A +++ G +P
Sbjct: 344 DEIHERGMNEDFLLIILKDLLSRR-SELKLILMSATLDAELFSSYFGGAGVIYIPGFTYP 402
Query: 253 V 253
V
Sbjct: 403 V 403
Score = 37 (18.1 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 8/43 (18%), Positives = 18/43 (41%)
Query: 223 IIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDY 265
+I D R F + A + + + ++++ P P+Y
Sbjct: 76 VISREKKDRRDFDKLAALATTLGLYSHAYAKVVVFSKIPLPNY 118
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 388 (141.6 bits), Expect = 3.1e-53, Sum P(2) = 3.1e-53
Identities = 105/335 (31%), Positives = 177/335 (52%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LKLII + S Y+G + V+ + PVE++Y + D ++ + IF++H
Sbjct: 218 LKLIINCSPFLISRLSSYYGNVPLLEVRNKH-PVEVVYLSGAQKDPFESVVRLIFEIHRS 276
Query: 280 EAPGDILVFLTGQEEIESVERLV-QERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPA- 337
GD++VFL +++IE +V QE P+ +LV +P++ P E+ +F P
Sbjct: 277 GEQGDVVVFLACEQDIEKTYEIVCQEGSNLNPDVG-ELVVIPLY---PKEK-CSLFRPVD 331
Query: 338 ------AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKA 391
A R+V+L T+ E+ + +++VID G + ++Y+P SL++ PIS++
Sbjct: 332 ETEKRCQASQRRVVLTTSCGESLIWSHTVRFVIDVGLERRQVYNPRIRANSLVLQPISQS 391
Query: 392 QALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKP-EIKRCNLSNVILQLKALGVDDIIG 450
QA R G GK F LY E K KP E++ NL++++L +K + + +
Sbjct: 392 QAEIRKQLLGSSPSGKLFCLYTEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGR 451
Query: 451 FDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNC 510
DFM +P+ S++++LE L L AL +D LS+ G M+ PLDP SK+++ + +F+C
Sbjct: 452 CDFMNRPAPESLMQALEDLDYLAALDNDGNLSE-FGIIMSEFPLDPQLSKSILASCEFDC 510
Query: 511 LEEMLITVAMLSVESIFFRSP-GEVRRGKKCNEIF 544
++EML AM++ S F P G C + F
Sbjct: 511 VDEMLTIAAMVTAPSCFLHVPHGAEEAAVTCWKTF 545
Score = 213 (80.0 bits), Expect = 3.1e-53, Sum P(2) = 3.1e-53
Identities = 55/163 (33%), Positives = 90/163 (55%)
Query: 28 SSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFC--- 84
SSR K+L++R+ LPI + +E + +N ++++ G++ GK++Q+PQ+ A +C
Sbjct: 56 SSRYYKLLKEREELPIWKEKYSFMESLLQNQVVLVSGDSKCGKSSQVPQWC--AEYCLSI 113
Query: 85 --RDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK------ 136
+ G +I TQ +E V +G VGY I F++ +T T ++
Sbjct: 114 HYQHGGVI-CTQVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDM 172
Query: 137 ---EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
E + +P+L Y II+D+ HER++ TDVLLGLLK V AR
Sbjct: 173 LQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLAR 215
Score = 37 (18.1 bits), Expect = 9.5e-35, Sum P(2) = 9.5e-35
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 28 SSRRQKILQQRKSLPIASVEKRLVEE 53
SS R+++ ++ P AS EKR E
Sbjct: 2 SSLREEMDEEELEHPNASPEKRYFPE 27
>UNIPROTKB|F1PER1 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 GO:GO:0005524 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
EMBL:AAEX03015636 RefSeq:XP_003433686.1 Ensembl:ENSCAFT00000020520
GeneID:100685023 KEGG:cfa:100685023 Uniprot:F1PER1
Length = 745
Score = 385 (140.6 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 106/334 (31%), Positives = 175/334 (52%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LKLII S+ S Y+G + V+ +Q PVE++Y + + L++ L IF++H
Sbjct: 211 LKLIINSSPHLISKLSSYYGNVPLIEVK-KQHPVEVVYLSGAQKESLESILRLIFEIHQS 269
Query: 280 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAP--- 336
GDI+VFL +++IE +V + L +LV VP++ P E+ +F P
Sbjct: 270 GEKGDIVVFLACEQDIEKAYEIVCQEGSNLNPDLGELVVVPLY---PKEK-CALFKPNDE 325
Query: 337 ----AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQ 392
R+V+L + E+ + +++VID G + ++Y+P SL+ PIS++Q
Sbjct: 326 TEKRCQVYQRRVVLTASSGESLIWSNTVRFVIDVGVERRKVYNPRIRANSLVTQPISQSQ 385
Query: 393 ALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKP-EIKRCNLSNVILQLKALGVDDIIGF 451
A R G GK F LY E K KP E++ NL++++L +K + + +
Sbjct: 386 AEIRKQILGSSSSGKLFCLYSEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGHC 445
Query: 452 DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCL 511
DFM +P+ S++++LE L L AL +D LS+ G M+ PLDP SK+++ + +F+C+
Sbjct: 446 DFMNRPAPESLMQALEDLDYLAALDNDGNLSE-FGIIMSEFPLDPQLSKSILASCEFDCV 504
Query: 512 EEMLITVAMLSVESIFFRSP-GEVRRGKKCNEIF 544
EEML AM++ + F P G C + F
Sbjct: 505 EEMLTIAAMVTAPNCFSNLPHGAEEAALTCWKTF 538
Score = 214 (80.4 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
Identities = 56/163 (34%), Positives = 88/163 (53%)
Query: 28 SSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFC--- 84
SSR K+L++R+ LPI + +E + +N I+I+ G+ GK++Q+PQ+ A +C
Sbjct: 49 SSRYYKLLKEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSSQVPQWC--AEYCLSI 106
Query: 85 --RDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK------ 136
+ G ++ TQ +E V +G VGY I F++ S+ T ++
Sbjct: 107 HYQHGGVV-CTQVHKPTAVQLALRVADEMDVNIGHEVGYMIPFENCCSSETILRYCTDDM 165
Query: 137 ---EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
E + P+L Y II+D+ HER++ TDVLLGLLK V AR
Sbjct: 166 LQREMMSSPFLGNYGVIILDDIHERSIATDVLLGLLKDVLLAR 208
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 375 (137.1 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 107/300 (35%), Positives = 154/300 (51%)
Query: 247 QGRQFPVEILYTLYPEPDYLDATLITIFQVHL--DEAPGDILVFLTGQEEIESVERLVQE 304
QG+Q + + T+ PE +D +LI + D G ILVFL G ++I ++
Sbjct: 516 QGQQLLDKYMATINPEQ--VDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKT----RQ 569
Query: 305 RLLQLP--EASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKY 362
RLL+ P S K + + S +P+ +Q +VF G RK++LATNIAE++VTI + Y
Sbjct: 570 RLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVY 629
Query: 363 VIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLED 422
VID G +K + YDP + +L +SKA A QR GRAGR PG C+ LY + D
Sbjct: 630 VIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAASMPD 689
Query: 423 STKPEIKRCNLSNVILQLKALGVDDIIGFDFMEK----PSRASIIKSLEQLFLLGALTDD 478
PEIKR + + LQ+K L + DF++K P SI +L L +GALT
Sbjct: 690 FKVPEIKRMPVEELCLQVKILDPNCKTN-DFLQKLLDPPVDQSIANALSILQDIGALTPQ 748
Query: 479 CKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGK 538
+L++ +G + LP+ P+ SK L A NCL+ L + F V R K
Sbjct: 749 EELTE-LGEKFGHLPVHPLISKMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQK 807
Score = 169 (64.5 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 46/153 (30%), Positives = 72/153 (47%)
Query: 32 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLF-HAGFC-RDGKL 89
++I + R LPI S + + V N +++I GETG GKTTQ+PQ+L H R+
Sbjct: 178 KEITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCK 237
Query: 90 IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----KEALLDPYLS 145
I TQP E G +G+ +GY +R + + + LL +
Sbjct: 238 IVCTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVG 297
Query: 146 RYSA--------IIVDEAHERTVHTDVLLGLLK 170
+ S IIVDE HER ++D +L +++
Sbjct: 298 KGSVSSVSDITHIIVDEIHERDCYSDFMLAIIR 330
Score = 98 (39.6 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
L+LI+MSA+LDA FS YFG V V G +PV LY
Sbjct: 339 LRLILMSATLDAERFSGYFGGCPVVRVPGFTYPVRTLY 376
>UNIPROTKB|Q7L7V1 [details] [associations]
symbol:DHX32 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32" species:9606 "Homo sapiens"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 PROSITE:PS51194 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 EMBL:CH471066 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 EMBL:AY064247 EMBL:AL360176
UniGene:Hs.370292 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOVERGEN:HBG039428 EMBL:AF427340 EMBL:AF427341 EMBL:AY064250
EMBL:AK001556 EMBL:AK001751 EMBL:AK024869 EMBL:BC002473
EMBL:BC037925 EMBL:BC068471 EMBL:AL162051 IPI:IPI00334601
IPI:IPI00644447 PIR:T47184 RefSeq:NP_060650.2
ProteinModelPortal:Q7L7V1 SMR:Q7L7V1 IntAct:Q7L7V1 STRING:Q7L7V1
PhosphoSite:Q7L7V1 DMDM:74759011 PRIDE:Q7L7V1 DNASU:55760
Ensembl:ENST00000284688 Ensembl:ENST00000284690
Ensembl:ENST00000368721 Ensembl:ENST00000415732 GeneID:55760
KEGG:hsa:55760 UCSC:uc001lje.1 UCSC:uc001ljf.1 CTD:55760
GeneCards:GC10M127515 HGNC:HGNC:16717 HPA:HPA048872 MIM:607960
neXtProt:NX_Q7L7V1 PharmGKB:PA27219 InParanoid:Q7L7V1 OMA:LACEQDI
OrthoDB:EOG4N30NF PhylomeDB:Q7L7V1 ChiTaRS:DHX32 GenomeRNAi:55760
NextBio:60779 Bgee:Q7L7V1 Genevestigator:Q7L7V1 Uniprot:Q7L7V1
Length = 743
Score = 378 (138.1 bits), Expect = 6.5e-51, Sum P(2) = 6.5e-51
Identities = 106/335 (31%), Positives = 177/335 (52%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LKLII S+ + Y+G + V+ + PVE++Y + D ++ L IF++H
Sbjct: 211 LKLIINSSPHLISKLNSYYGNVPVIEVKNKH-PVEVVYLSEAQKDSFESILRLIFEIHHS 269
Query: 280 EAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAP-- 336
GDI+VFL +++IE V E + Q L P+ +LV VP++ P E+ +F P
Sbjct: 270 GEKGDIVVFLACEQDIEKVCETVYQGSNLN-PDLG-ELVVVPLY---PKEK-CSLFKPLD 323
Query: 337 -----AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKA 391
R+V+L T+ E + +++VID G + ++Y+P SL++ PIS++
Sbjct: 324 ETEKRCQVYQRRVVLTTSSGEFLIWSNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQS 383
Query: 392 QALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKP-EIKRCNLSNVILQLKALGVDDIIG 450
QA R G GK F LY E K KP E++ NL++++L +K + + +
Sbjct: 384 QAEIRKQILGSSSSGKFFCLYTEEFASKDMTPLKPAEMQEANLTSMVLFMKRIDIAGLGH 443
Query: 451 FDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNC 510
DFM +P+ S++++LE L L AL +D LS+ G M+ PLDP SK+++ + +F+C
Sbjct: 444 CDFMNRPAPESLMQALEDLDYLAALDNDGNLSE-FGIIMSEFPLDPQLSKSILASCEFDC 502
Query: 511 LEEMLITVAMLSVESIFFRSP-GEVRRGKKCNEIF 544
++E+L AM++ + F P G C + F
Sbjct: 503 VDEVLTIAAMVTAPNCFSHVPHGAEEAALTCWKTF 537
Score = 209 (78.6 bits), Expect = 6.5e-51, Sum P(2) = 6.5e-51
Identities = 56/163 (34%), Positives = 87/163 (53%)
Query: 28 SSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFC--- 84
SSR K+L++R+ LPI + +E + +N I+I+ G+ GK+ Q+PQ+ A +C
Sbjct: 49 SSRYYKLLKEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWC--AEYCLSI 106
Query: 85 --RDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK------ 136
+ G +I TQ +E V +G VGY I F++ + T ++
Sbjct: 107 HYQHGGVI-CTQVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNETILRYCTDDM 165
Query: 137 ---EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
E + +P+L Y II+D+ HER++ TDVLLGLLK V AR
Sbjct: 166 LQREMMSNPFLGSYGVIILDDIHERSIATDVLLGLLKDVLLAR 208
>UNIPROTKB|F1SDM5 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
OMA:LACEQDI EMBL:CT841550 Ensembl:ENSSSCT00000011756 Uniprot:F1SDM5
Length = 742
Score = 379 (138.5 bits), Expect = 6.5e-50, Sum P(2) = 6.5e-50
Identities = 106/345 (30%), Positives = 178/345 (51%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LKLII S+ S Y+G + V ++ PVE++Y + + L+A L IF++H
Sbjct: 211 LKLIINSSPHLISTLSSYYGNVPLIEVTSKR-PVEVVYLSGAQKEALEAVLRLIFEIHHS 269
Query: 280 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAP--- 336
GDI+VFL +++IE +V + L +LV VP++ P E+ +F P
Sbjct: 270 GEEGDIVVFLACEQDIEKAYEIVCQEGTNLNPDLGELVVVPLY---PKEK-CALFKPNDE 325
Query: 337 ----AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR-LYDPVKGMESLLVVPISKA 391
R+V+L + E+ + +++VID G + + +Y P +SL++ PIS++
Sbjct: 326 AEKRCQVYQRRVVLTASSGESLIWSNTVRFVIDVGVERRKKVYSPRIRADSLVLQPISQS 385
Query: 392 QALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKP-EIKRCNLSNVILQLKALGVDDIIG 450
QA R G GK F LY E K KP E++ NL++++L +K + + +
Sbjct: 386 QAEMRKQVLGSSSSGKLFCLYSEEFASKDMRPLKPAEMQHANLTSMVLFMKRVDIAGLGH 445
Query: 451 FDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNC 510
DFM +P+ S++++LE L L AL +D LS+ G M+ PLDP SK+++ + +F+C
Sbjct: 446 CDFMNRPAPESLMQALEDLDYLAALDNDGNLSE-FGIIMSEFPLDPQLSKSILASCEFDC 504
Query: 511 LEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIFCKSRWRSPHFD 555
++EML AM++ + F P G + + C + P D
Sbjct: 505 VDEMLTIAAMVTAPNCFSHLPS----GAEAEALTCWKTFLHPEGD 545
Score = 198 (74.8 bits), Expect = 6.5e-50, Sum P(2) = 6.5e-50
Identities = 52/163 (31%), Positives = 88/163 (53%)
Query: 28 SSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFC--- 84
SSR K+L++R+ LPI + +E + ++ ++I+ G+ GK++Q+PQ+ A +C
Sbjct: 49 SSRYYKLLKEREDLPIWKEKYSFMENLLQSQVVIVSGDATCGKSSQVPQWC--AEYCLSI 106
Query: 85 --RDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK------ 136
+ G ++ TQ +E V +G VGY I F++ ++ T ++
Sbjct: 107 HYQHGGVV-CTQVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSETILRYCTDDM 165
Query: 137 ---EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
E + +P+L Y II+D+ ER++ TDVLLGLLK V AR
Sbjct: 166 LQREMMSNPFLGSYGVIILDDVQERSIATDVLLGLLKDVLLAR 208
>UNIPROTKB|A7MBI4 [details] [associations]
symbol:DHX32 "DHX32 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
EMBL:DAAA02059534 EMBL:DAAA02059535 EMBL:DAAA02059536 EMBL:BC151578
IPI:IPI00715161 RefSeq:NP_001094614.1 UniGene:Bt.44006
Ensembl:ENSBTAT00000007619 GeneID:532978 KEGG:bta:532978
InParanoid:A7MBI4 NextBio:20875863 Uniprot:A7MBI4
Length = 744
Score = 370 (135.3 bits), Expect = 1.5e-49, Sum P(2) = 1.5e-49
Identities = 102/334 (30%), Positives = 172/334 (51%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LKLII S+ S Y+G + V+ + PVE +Y + + ++ L IF++H
Sbjct: 211 LKLIINSSPHLINKLSSYYGNVPLIQVKNKH-PVEAVYLSGAQKESFESILRLIFEIHHS 269
Query: 280 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAP--- 336
GDI+VFL +++IE +V + L +LV VP++ P E+ +F P
Sbjct: 270 GEKGDIVVFLACEQDIEKAYEIVCQEGSNLNPDLGELVVVPLY---PKEK-CALFKPNDE 325
Query: 337 ----AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQ 392
R+V+L + E+ + +K+VID G + ++Y+P +SL+ PIS++Q
Sbjct: 326 TEKRCPVYQRRVVLTASSGESLICSNTVKFVIDVGVERRKVYNPRIRADSLVTQPISQSQ 385
Query: 393 ALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKP-EIKRCNLSNVILQLKALGVDDIIGF 451
A R GK F LY E + KP E++ NL++++L +K + + +
Sbjct: 386 AETRKQILSASPSGKLFCLYSEEFASRDMQPLKPAEMQEANLTSMVLFMKRVDIAGLGHC 445
Query: 452 DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCL 511
DFM +P+ S++++LE L L AL +D LS+ G M+ PLDP SK+++ + +F+C+
Sbjct: 446 DFMNRPAPESLMQALEDLDYLAALDNDGNLSE-FGIIMSEFPLDPQLSKSILASCEFDCV 504
Query: 512 EEMLITVAMLSVESIFFRSP-GEVRRGKKCNEIF 544
+EML AM++ + F P G C + F
Sbjct: 505 DEMLTIAAMVTAPNCFSHLPRGAEEAALSCWKTF 538
Score = 208 (78.3 bits), Expect = 1.5e-49, Sum P(2) = 1.5e-49
Identities = 55/163 (33%), Positives = 90/163 (55%)
Query: 28 SSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFC--- 84
SSR K+L++R+ LPI + +E++ ++ I+I+ G+ GK++Q+PQ+ A +C
Sbjct: 49 SSRYYKLLKEREDLPIWKEKYSFMEKLLQSQIVIVSGDAKCGKSSQVPQWC--AEYCLSI 106
Query: 85 --RDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK------ 136
R G ++ TQ +E V +G VGY I F++ ++ T ++
Sbjct: 107 DYRHGGVV-CTQVHKPTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSETILRYCTDDM 165
Query: 137 ---EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
E + +P+L Y II+D+ HER++ TDVLLGLLK V AR
Sbjct: 166 LQREMMSNPFLGSYGVIILDDIHERSMATDVLLGLLKDVLLAR 208
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 341 (125.1 bits), Expect = 1.6e-49, Sum P(3) = 1.6e-49
Identities = 90/255 (35%), Positives = 145/255 (56%)
Query: 285 ILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRK 343
ILVFL G EI ++ + L+ +R Q + + P+ S++ +E+Q F G RK
Sbjct: 970 ILVFLPGIAEIRTLNDLLLGDRSFQ-----QNWLVYPLHSTIATEEQEAAFLVPPHGMRK 1024
Query: 344 VILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGRE 403
++LATNIAET +TIP + VID G + +D + M L+ IS+A A QR GRAGR
Sbjct: 1025 IVLATNIAETGITIPDVTCVIDTGKHREMRFDERRQMSRLIDTFISRANAKQRRGRAGRV 1084
Query: 404 GPGKCFRLYPENEFDKL-EDSTKPEIKRCNLSNVILQLKAL---GVDDIIGFDFMEKPSR 459
G CF ++ + D + D PE+ R +L ++ +++K G+++ + ++ PS
Sbjct: 1085 QQGLCFHMFTKYRHDAIMADQQTPEMLRLSLQDLAIRVKICKIGGIEETLS-KALDPPSA 1143
Query: 460 ASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVA 519
+I ++++ L + ALT L+ P+G+Q+ARLPLD K +++ F CL+ M ITVA
Sbjct: 1144 KNIRRAIDALIDVRALTQGEDLT-PLGNQLARLPLDVFLGKLILLGSIFKCLD-MAITVA 1201
Query: 520 -MLSVESIFFRSPGE 533
+LS +S F G+
Sbjct: 1202 AILSSKSPFVAPFGQ 1216
Score = 197 (74.4 bits), Expect = 1.6e-49, Sum P(3) = 1.6e-49
Identities = 57/179 (31%), Positives = 95/179 (53%)
Query: 16 PKLHSKPFFNDSSSRR-QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQL 74
P+ + + +++ SSS R Q +L+ R LP+ + ++++ V ++ ++I+ GETG GK+TQ+
Sbjct: 665 PEYYQRIWYDKSSSPRYQNMLRSRMQLPMWAFREQVLSAVDQHQVVIVCGETGCGKSTQV 724
Query: 75 PQFLFHAGFCRDGKLIGV--TQPXXXXXXXXXXXXXEESGV---ELGQR---VGYSIRFD 126
P FL + GK + T+P EE G +LG VGYSIR +
Sbjct: 725 PSFLLEHQLAQ-GKACKIYCTEPRRISAISLARRVSEELGEGRNDLGTSRSLVGYSIRLE 783
Query: 127 DRTSTSTRIKEA-------LLDPY--LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
TS TR+ A +L+ L + +++DE HER++ +D LL +LKK+ R
Sbjct: 784 ANTSRETRLVFATTGIVMRMLEGSNDLRDITHLVLDEVHERSIDSDFLLIVLKKLMTRR 842
Score = 101 (40.6 bits), Expect = 1.6e-49, Sum P(3) = 1.6e-49
Identities = 33/104 (31%), Positives = 56/104 (53%)
Query: 194 DMILDRGNDTNGIN-TLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFP 252
D + +R D++ + LK+ R+ LK+++MSA++DA FS Y A ++V GR FP
Sbjct: 819 DEVHERSIDSDFLLIVLKKLMTRR-KDLKVVLMSATVDADRFSNYLDGAPVLNVPGRTFP 877
Query: 253 VEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIE 296
V++ + D ++ T TI Q + P + LV + E+E
Sbjct: 878 VQVNFL----EDAVELTGYTIDQ----KVPQERLVEIDEDAEVE 913
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 396 (144.5 bits), Expect = 1.5e-48, Sum P(2) = 1.5e-48
Identities = 99/282 (35%), Positives = 152/282 (53%)
Query: 262 EPDYLDATLITIFQVH--LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV 319
+ D +D LI H L+E G ILVFL G + I ++ L+ +++ S + + +
Sbjct: 447 DDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF---KSDRFIII 503
Query: 320 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 379
P+ S +P+ Q +VF G RK+++ATNIAETS+TI + +VID G +K +D
Sbjct: 504 PLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNN 563
Query: 380 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQ 439
+ ++ +SKA A QR GRAGR PG C+ LY L+D PEI R L + LQ
Sbjct: 564 ISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQ 623
Query: 440 LKALGVDDIIGF--DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPI 497
+K L + I F M+ PSR +++ ++ L L AL +L+ P+G +ARLP++P
Sbjct: 624 IKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEELT-PLGVHLARLPVEPH 682
Query: 498 YSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKK 539
K ++ F CL+ +L A LS F+ P + GK+
Sbjct: 683 IGKMILFGALFCCLDPVLTIAASLS-----FKDPFVIPLGKE 719
Score = 149 (57.5 bits), Expect = 1.5e-48, Sum P(2) = 1.5e-48
Identities = 44/146 (30%), Positives = 66/146 (45%)
Query: 47 EKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK----LIGVTQPXXXXXXX 102
++ LV + N + +I GETG GKTTQ+ QF+ + GK I TQP
Sbjct: 194 KQELVNLINNNRVTVISGETGCGKTTQVTQFILD-DYIERGKGSTCRIVCTQPRRISAIS 252
Query: 103 XXXXXXEESGVELG--QRVGYSIRFDDRT----------STSTRIKEALLDPYLSRYSAI 150
E G + GY IR R +T ++ D +LS S +
Sbjct: 253 VAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSISHV 312
Query: 151 IVDEAHERTVHTDVLLGLLKKVQNAR 176
++DE HER + +DVL+ ++K + N R
Sbjct: 313 VLDEIHERNLQSDVLMSIIKDLLNVR 338
Score = 96 (38.9 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 35/100 (35%), Positives = 50/100 (50%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LK+I+MSA+L+A FSEYF +H+ G FPV + Y L D ++ T + D
Sbjct: 341 LKVILMSATLNAEKFSEYFDNCPMIHIPGFTFPV-VEYLL---EDVIEKLRYT--PENTD 394
Query: 280 EAPGDILVFLTG---QEEIESVERLVQERLLQLPEASRKL 316
P F+ G + E E E + +ER PE R+L
Sbjct: 395 RRPRWKKGFMQGHISRPEKEEKEEIYRERW---PEYLRQL 431
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 323 (118.8 bits), Expect = 2.0e-48, Sum P(4) = 2.0e-48
Identities = 79/210 (37%), Positives = 114/210 (54%)
Query: 332 RVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKA 391
+VF G RK+++ATNIAETS+TI + YVID G +K +D + ++ +SKA
Sbjct: 521 QVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 580
Query: 392 QALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGF 451
A QR GRAGR PG C+ LY L+D PEI R L + LQ+K L + I F
Sbjct: 581 NAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYF 640
Query: 452 --DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFN 509
M+ PS +++ S+ L L AL +L+ P+G +ARLP++P K ++ F
Sbjct: 641 LSRLMDPPSNEAVLLSIRHLMELNALDKQEELT-PLGVHLARLPVEPHIGKMILFGALFC 699
Query: 510 CLEEMLITVAMLSVESIFFRSPGEVRRGKK 539
CL+ +L A LS F+ P + GK+
Sbjct: 700 CLDPVLTIAASLS-----FKDPFVIPLGKE 724
Score = 176 (67.0 bits), Expect = 2.0e-48, Sum P(4) = 2.0e-48
Identities = 51/156 (32%), Positives = 72/156 (46%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK----LIGVT 93
R+ LP ++K LV + + + +I GETG GKTTQ+ QF+ + GK I T
Sbjct: 204 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSACRIVCT 262
Query: 94 QPXXXXXXXXXXXXXEESGVELGQ--RVGYSIRFDDRT----------STSTRIKEALLD 141
QP E G GY IR R +T ++ D
Sbjct: 263 QPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD 322
Query: 142 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
PYLS S I++DE HER + +DVL+ ++K + N RS
Sbjct: 323 PYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRS 358
Score = 99 (39.9 bits), Expect = 2.0e-48, Sum P(4) = 2.0e-48
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 259
LK+I+MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 360 LKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 398
Score = 64 (27.6 bits), Expect = 2.0e-48, Sum P(4) = 2.0e-48
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 262 EPDYLDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLL 307
E D +D LI I + L+E G ILVFL G + I ++ L+ +++
Sbjct: 466 EDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM 513
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 512 (185.3 bits), Expect = 3.5e-48, P = 3.5e-48
Identities = 161/539 (29%), Positives = 268/539 (49%)
Query: 28 SSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH-AGFCRD 86
S+R + I +R+SLPI + ++ ++++ +LII G TGSGK+TQLPQ++ A R
Sbjct: 196 SNRNRNIQHERRSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYILEWAAEHRA 255
Query: 87 GKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK--------EA 138
I V+QP +E G G VGY+IR + + S++T + A
Sbjct: 256 PVRIVVSQPRRIAAISVSERISKERGEAPGTTVGYNIRMNRQCSSNTVLMLTTSGCLLRA 315
Query: 139 L-LDP--YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSXXXXXXXXSDM 195
L +D + + +I+DEAHER + TD LL L K++ ++ H D
Sbjct: 316 LAMDKKSFFKNTTHLIIDEAHERDLDTDFLL-LATKLELQKNP----HLRLVLMSATMD- 369
Query: 196 ILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAV-HVQGRQFPVE 254
L+ ++ G T+ +GR F + + + L G+ + K + G++ P E
Sbjct: 370 -LEALSNYFGGGTVMDVEGRSFE-VSIYHLEDILSKTGYM-HPRMEKFLGKPTGKETPSE 426
Query: 255 ILYTLYP-----EPDYLDATLITIFQVHLDEAP-GDILVFLTGQEEIESVERLVQERLLQ 308
+L Y PD + ++++ ++ L + G ++V+L G ++ S+ ++
Sbjct: 427 LLAAYYGGNTIVHPDIDNDLIVSLLELLLRQGDAGAVIVYLPGYSDMTSLLARLES---S 483
Query: 309 LPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFR-KVILATNIAETSVTIPGIKYVIDPG 367
LP ++ + + S + + +Q +VF G R K+IL+TNI +TS+TIP + YVID G
Sbjct: 484 LPR--EQITIILLHSQVDNSEQRKVFR-TYPGVRLKIILSTNIGQTSITIPDLLYVIDTG 540
Query: 368 FVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPE 427
K + YD L + IS+A A QR+GRAGR G C+RLY + ++ T PE
Sbjct: 541 LAKMKTYDSTIDASQLTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMARMNLYTIPE 600
Query: 428 IKRCNLSNVILQLKALGVDDIIGFDFM----EKPSRASIIKSLEQLFLLGALTDDCKLSD 483
I R L + L K D I +F+ + P + ++++S +L LLG L + +++
Sbjct: 601 IMRRTLDEICLLTKLAAPDKKIE-NFLALALDTPPKDAVMQSCSRLKLLGVLDERDEVT- 658
Query: 484 PVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNE 542
P+GH +A LPL K L+ + CL+ M+I A SV F + + RGKK +
Sbjct: 659 PLGHIVAELPLGVQIGKCLVYSIYLRCLDSMIIIAAYHSVRDPFVLN---IERGKKSGQ 714
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 331 (121.6 bits), Expect = 5.1e-48, Sum P(3) = 5.1e-48
Identities = 94/294 (31%), Positives = 151/294 (51%)
Query: 266 LDATLITIFQV-HLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFS 323
LD + ++ + H EA G IL+FL G +EI + +R++ + A R V + + S
Sbjct: 605 LDLIMHLLYNICHSCEA-GAILIFLPGYDEIVGLRDRILFDDKRFAENAHRYQVFM-LHS 662
Query: 324 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 383
++ + Q +V AG RK+IL+TNIAETS+T+ + +VID G VK + +D + + L
Sbjct: 663 NMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTML 722
Query: 384 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 443
+V ISKA A+QR GRAGR PG CFRL+ F + + PE+ R L + L K L
Sbjct: 723 KMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLL 782
Query: 444 GVDDIIGFDFMEK---PSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSK 500
+ DF+ K P A I+++ Q+ D + +G+ +A LP++P K
Sbjct: 783 APVNCAIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGK 842
Query: 501 ALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIFCKSRWRSPHF 554
++ A CL+ +L L+ F P + +K + C+ R+ + F
Sbjct: 843 MVLCAVVLKCLDPILTIACTLAYRDPFVL-PTQA--SQKRAAMLCRKRFTAGTF 893
Score = 203 (76.5 bits), Expect = 5.1e-48, Sum P(3) = 5.1e-48
Identities = 54/145 (37%), Positives = 77/145 (53%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK--LIGVTQP 95
R+SLP+ ++ +V+ +++N +++IVGETGSGKTTQ+PQFL F ++G I TQP
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 247
Query: 96 XXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----KEALL------DPYLS 145
E +GQ +GY IR + R S T + LL D LS
Sbjct: 248 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 307
Query: 146 RYSAIIVDEAHERTVHTDVLLGLLK 170
+ +IVDE HER +D LL L+
Sbjct: 308 TVTHVIVDEVHERDRFSDFLLTKLR 332
Score = 92 (37.4 bits), Expect = 5.1e-48, Sum P(3) = 5.1e-48
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+K LKLI+ SA+LD F YFG +++QGR F V+ ++
Sbjct: 336 QKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMF 378
>UNIPROTKB|B4DVG8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC009087
UniGene:Hs.151218 HGNC:HGNC:17211 ChiTaRS:DHX38 EMBL:AK301074
IPI:IPI00909589 SMR:B4DVG8 STRING:B4DVG8 Ensembl:ENST00000536867
UCSC:uc010vmp.2 HOVERGEN:HBG093770 Uniprot:B4DVG8
Length = 539
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 102/216 (47%), Positives = 146/216 (67%)
Query: 330 QMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPIS 389
Q ++F A G RK I+ATNIAETS+T+ GI +VID G+ K ++++P GM++L + PIS
Sbjct: 99 QAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPIS 158
Query: 390 KAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDI 448
+A A QRSGRAGR GPG+CFRLY ++ + ++L +T PEI+R NL+NV+L LK+LGV D+
Sbjct: 159 QANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDL 218
Query: 449 IGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQF 508
+ F FM+ P +++ S+ QL++LGAL + L+ G M PLDP SK LIV+
Sbjct: 219 LQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTS-TGRLMVEFPLDPALSKMLIVSCDM 277
Query: 509 NCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIF 544
C E+L+ V+MLSV +IF+R G + E F
Sbjct: 278 GCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKF 313
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 326 (119.8 bits), Expect = 2.2e-47, Sum P(3) = 2.2e-47
Identities = 89/294 (30%), Positives = 152/294 (51%)
Query: 266 LDATLITIFQV-HLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFS 323
LD + ++ + H +A G +L+FL G +EI + +R++ + + +++ + + S
Sbjct: 606 LDLIMHLLYNICHSCDA-GAVLIFLPGYDEIVGLRDRILFDDK-RFADSTHRYQVFMLHS 663
Query: 324 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 383
++ + Q +V AG RK+IL+TNIAETS+T+ + +VID G VK + +D + + L
Sbjct: 664 NMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTML 723
Query: 384 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 443
+V ISKA A+QR GRAGR PG CFRL+ F + + PE+ R L + L K L
Sbjct: 724 KMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLL 783
Query: 444 GVDDIIGFDFMEK---PSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSK 500
+ DF+ K P A I+++ Q+ D + +G+ +A LP++P K
Sbjct: 784 APVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGK 843
Query: 501 ALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIFCKSRWRSPHF 554
++ A CL+ +L L+ F P + +K + C+ R+ + F
Sbjct: 844 MVLCAVVLKCLDPILTIACTLAYRDPFVL-PTQA--SQKRAAMLCRKRFTAGAF 894
Score = 203 (76.5 bits), Expect = 2.2e-47, Sum P(3) = 2.2e-47
Identities = 54/145 (37%), Positives = 77/145 (53%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK--LIGVTQP 95
R+SLP+ ++ +V+ +++N +++IVGETGSGKTTQ+PQFL F ++G I TQP
Sbjct: 190 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 248
Query: 96 XXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----KEALL------DPYLS 145
E +GQ +GY IR + R S T + LL D LS
Sbjct: 249 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 308
Query: 146 RYSAIIVDEAHERTVHTDVLLGLLK 170
+ +IVDE HER +D LL L+
Sbjct: 309 TVTHVIVDEVHERDRFSDFLLTKLR 333
Score = 92 (37.4 bits), Expect = 2.2e-47, Sum P(3) = 2.2e-47
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+K LKLI+ SA+LD F YFG +++QGR F V+ ++
Sbjct: 337 QKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMF 379
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 320 (117.7 bits), Expect = 2.3e-47, Sum P(3) = 2.3e-47
Identities = 90/294 (30%), Positives = 151/294 (51%)
Query: 266 LDATLITIFQV-HLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFS 323
LD + ++ + H +A G IL+FL G +EI + +R++ + + + + + + S
Sbjct: 605 LDLIMHLLYNICHGCDA-GAILIFLPGYDEIVGLRDRILFDDK-RFADNTHRYQVFMLHS 662
Query: 324 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 383
++ + Q +V AG RK+IL+TNIAETS+T+ + +VID G VK + +D + + L
Sbjct: 663 NMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTML 722
Query: 384 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 443
+V ISKA A+QR GRAGR PG CFRL+ F + + PE+ R L + L K L
Sbjct: 723 KMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLL 782
Query: 444 GVDDIIGFDFMEK---PSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSK 500
+ DF+ K P A I+++ Q+ D + +G+ +A LP++P K
Sbjct: 783 APVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGK 842
Query: 501 ALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIFCKSRWRSPHF 554
++ A CL+ +L L+ F P + +K + C+ R+ + F
Sbjct: 843 MVLCAVVLKCLDPILTIACTLAYRDPFVL-PTQA--SQKRAAMLCRKRFTAGTF 893
Score = 203 (76.5 bits), Expect = 2.3e-47, Sum P(3) = 2.3e-47
Identities = 54/145 (37%), Positives = 77/145 (53%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK--LIGVTQP 95
R+SLP+ ++ +V+ +++N +++IVGETGSGKTTQ+PQFL F ++G I TQP
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 247
Query: 96 XXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----KEALL------DPYLS 145
E +GQ +GY IR + R S T + LL D LS
Sbjct: 248 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 307
Query: 146 RYSAIIVDEAHERTVHTDVLLGLLK 170
+ +IVDE HER +D LL L+
Sbjct: 308 TVTHVIVDEVHERDRFSDFLLTKLR 332
Score = 92 (37.4 bits), Expect = 2.3e-47, Sum P(3) = 2.3e-47
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+K LKLI+ SA+LD F YFG +++QGR F V+ ++
Sbjct: 336 QKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMF 378
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 371 (135.7 bits), Expect = 2.7e-47, Sum P(3) = 2.7e-47
Identities = 100/272 (36%), Positives = 152/272 (55%)
Query: 285 ILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKV 344
+LVFL G EI V+ L+++ + + RK + S+L S QQ VF G RK+
Sbjct: 906 VLVFLPGISEILRVKSLIED--MPMFRNHRKFCIYMLHSTLSSAQQQSVFNIPPKGCRKI 963
Query: 345 ILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREG 404
+L+TNIAET VTIP + VID G + Y+ + + L +SKA A QRSGRAGR
Sbjct: 964 VLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRAGRVQ 1023
Query: 405 PGKCFRLYPENEFDK--LEDSTKPEIKRCNLSNVILQLKA--LG-VDDIIGFDFMEKPSR 459
G C+ L+ + + D L T PEI R NL V+L++K +G V D++G ++ PS
Sbjct: 1024 EGICYHLFSKFKHDTQFLSYQT-PEILRLNLQEVVLRVKMCQMGDVQDVLG-KALDPPSS 1081
Query: 460 ASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVA 519
+II++LE+L +GAL+++ KL+ +G +++LP+D K L++ + C++ VA
Sbjct: 1082 TNIIRALEKLHQVGALSENEKLTK-LGKFLSQLPVDANLGKILVLGCFYKCVDAASSIVA 1140
Query: 520 MLSVESIFFRSPGEVRRGKKCNEIFCKSRWRS 551
ML++ S F +S K F K RS
Sbjct: 1141 MLTIGSPFRKSVDNEFSANKARLSFAKENTRS 1172
Score = 156 (60.0 bits), Expect = 2.7e-47, Sum P(3) = 2.7e-47
Identities = 43/155 (27%), Positives = 73/155 (47%)
Query: 28 SSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDG 87
S +K R LP + +++ V + +LII G+TG GK+TQ+P FL ++G
Sbjct: 618 SESAEKFKVFRNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLENS-TKNG 676
Query: 88 KLIG--VTQPXXXXXXXXXXXXXEESG-----VELGQRVGYSIRFDDR---------TST 131
K + VT+P +E G + VGYS+R D + +T
Sbjct: 677 KAVKIYVTEPRRISAISLANRVSQELGGNPPSARSHELVGYSVRLDSKCTPLTPLTYVTT 736
Query: 132 STRIKEALLDPYLSRYSAIIVDEAHERTVHTDVLL 166
T ++ + + + +I+DE HER++ +D+LL
Sbjct: 737 GTFLRLLEVGNEIESVTHLIIDEVHERSIDSDLLL 771
Score = 79 (32.9 bits), Expect = 2.7e-47, Sum P(3) = 2.7e-47
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
LK+IIMSA+L+A F YF + + + G+ +PV Y
Sbjct: 784 LKIIIMSATLNAEKFQLYFEGSNLITIPGKTYPVHRFY 821
Score = 46 (21.3 bits), Expect = 7.6e-36, Sum P(3) = 7.6e-36
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 31 RQKILQQRKSLPIASVEKRLVEEVRKNDI 59
R + + + K+L +R+VEE++KN I
Sbjct: 352 RIEFMNKLKALQQKLENERIVEEIKKNGI 380
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 325 (119.5 bits), Expect = 3.0e-47, Sum P(3) = 3.0e-47
Identities = 90/294 (30%), Positives = 151/294 (51%)
Query: 266 LDATLITIFQV-HLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFS 323
LD + ++ + H +A G IL+FL G +EI + +R++ + + + + + + S
Sbjct: 621 LDLIMHLLYNICHSCDA-GAILIFLPGYDEIVGLRDRILFDDK-RFADNTHRYQVFMLHS 678
Query: 324 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 383
++ + Q +V AG RK+IL+TNIAETS+T+ + +VID G VK + +D + + L
Sbjct: 679 NMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTML 738
Query: 384 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 443
+V ISKA A+QR GRAGR PG CFRL+ F + + PE+ R L + L K L
Sbjct: 739 KMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLL 798
Query: 444 GVDDIIGFDFMEK---PSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSK 500
+ DF+ K P A I+++ Q+ D + +G+ +A LP++P K
Sbjct: 799 APVNCTIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGK 858
Query: 501 ALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIFCKSRWRSPHF 554
++ A CL+ +L L+ F P + +K + C+ R+ + F
Sbjct: 859 MVLCAVVLKCLDPILTIACTLAYRDPFVL-PTQA--SQKRAAMLCRKRFTAGTF 909
Score = 203 (76.5 bits), Expect = 3.0e-47, Sum P(3) = 3.0e-47
Identities = 54/145 (37%), Positives = 77/145 (53%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK--LIGVTQP 95
R+SLP+ ++ +V+ +++N +++IVGETGSGKTTQ+PQFL F ++G I TQP
Sbjct: 205 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 263
Query: 96 XXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----KEALL------DPYLS 145
E +GQ +GY IR + R S T + LL D LS
Sbjct: 264 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 323
Query: 146 RYSAIIVDEAHERTVHTDVLLGLLK 170
+ +IVDE HER +D LL L+
Sbjct: 324 TVTHVIVDEVHERDRFSDFLLTKLR 348
Score = 92 (37.4 bits), Expect = 3.0e-47, Sum P(3) = 3.0e-47
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+K LKLI+ SA+LD F YFG +++QGR F V+ ++
Sbjct: 352 QKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMF 394
>UNIPROTKB|H9KZI9 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00575 PROSITE:PS00690
PROSITE:PS50126 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 EMBL:AADN02006936
Ensembl:ENSGALT00000013764 OMA:CRERERG Uniprot:H9KZI9
Length = 692
Score = 356 (130.4 bits), Expect = 3.5e-47, Sum P(2) = 3.5e-47
Identities = 77/152 (50%), Positives = 100/152 (65%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 93
I++QR+SLPI ++++L++ V N ILI++GETGSGKTTQ+ Q+L AG+ GK IG T
Sbjct: 468 IIEQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCT 526
Query: 94 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 144
QP EE G LGQ VGY+IRF+D TS T IK E L+DP L
Sbjct: 527 QPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDL 586
Query: 145 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 587 TQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 618
Score = 202 (76.2 bits), Expect = 3.5e-47, Sum P(2) = 3.5e-47
Identities = 41/77 (53%), Positives = 54/77 (70%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 274
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE DYLDA+LIT+
Sbjct: 616 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 675
Query: 275 QVHLDEAPGDILVFLTG 291
Q+HL E PG+ +V + G
Sbjct: 676 QIHLTEPPGEWIVMIHG 692
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 341 (125.1 bits), Expect = 5.8e-47, Sum P(3) = 5.8e-47
Identities = 87/269 (32%), Positives = 144/269 (53%)
Query: 262 EPDYLDATLITIFQVHL-----DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKL 316
+ D +D +I VH+ + IL+FL G E+I L++ + E +
Sbjct: 924 QSDDVDHEMILQLIVHIVTKVSSTSEDSILIFLPGWEDISQTRELMRRHPMLRNE--NEF 981
Query: 317 VTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDP 376
+ +P+ SS+ + Q +VF RK++L+TNIAETS+TI + YVID VK + ++
Sbjct: 982 LILPLHSSVSMQLQAKVFEKPPPKIRKIVLSTNIAETSITINDVVYVIDSAKVKLKYHET 1041
Query: 377 VKGMESLLVVPISKAQALQRSGRAGR-EGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSN 435
+ + V K+ QR GRAGR G C+ + + ++ LE+ E++R L
Sbjct: 1042 QRDLTLFQTVWACKSSLKQRRGRAGRVRKDGVCYHMVSRDRYNTLEEFQLSEMRRMPLHE 1101
Query: 436 VILQLKALGVDDIIGF--DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLP 493
+ LQ+K L + D+IGF + +E P SI ++ L LGAL + +L+ P+G Q++ +P
Sbjct: 1102 LCLQVKVLVLGDVIGFLSEALEPPETKSIDNAINLLIDLGALNANQELT-PLGLQLSFIP 1160
Query: 494 LDPIYSKALIVAGQFNCLEEMLITVAMLS 522
+DP K +I+ F CL+ +L T+A S
Sbjct: 1161 VDPRIGKMIILGSYFRCLDPIL-TIASFS 1188
Score = 223 (83.6 bits), Expect = 5.8e-47, Sum P(3) = 5.8e-47
Identities = 57/158 (36%), Positives = 79/158 (50%)
Query: 32 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLF-------HAGFC 84
++I Q+R LPI L+E ++ N I+II+G+TG GKTTQ+PQF+ HA +C
Sbjct: 708 KRIYQKRTELPIFKQRSHLIESIKNNQIIIIMGDTGCGKTTQIPQFVIEDMIDSGHAPYC 767
Query: 85 RDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTR---------- 134
I +TQP E ++G VGY IRFD+ T
Sbjct: 768 N----IVMTQPRRISVLGAAERMAYERLEKVGDTVGYQIRFDNVQPLGTSKLLVCTPGIL 823
Query: 135 IKEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
+K D L S + +DE HER +HTD LL +LKK+
Sbjct: 824 LKRMYSDMKLHNVSHLFIDEVHERDIHTDFLLIILKKL 861
Score = 50 (22.7 bits), Expect = 5.8e-47, Sum P(3) = 5.8e-47
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAV 244
L++I+MSA++D S YFG +
Sbjct: 868 LRVILMSATMDNSLVSAYFGTCPVI 892
Score = 50 (22.7 bits), Expect = 3.7e-15, Sum P(3) = 3.7e-15
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 413 PENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLL 472
P+N + +L+ + N+ N LQ + G +D DF+ P I+K +QL L
Sbjct: 1228 PKNLYPELQSD---HLSFLNIFNGWLQSRMDGTEDQYCQDFLSIPLLQQILKVKKQL--L 1282
Query: 473 GALTD 477
+ D
Sbjct: 1283 STIND 1287
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 380 (138.8 bits), Expect = 6.3e-47, Sum P(2) = 6.3e-47
Identities = 92/263 (34%), Positives = 148/263 (56%)
Query: 266 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 323
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 678 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 734
Query: 324 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 383
++P Q +F G RK++LATNIAETS+TI I +V+D G K YD + L
Sbjct: 735 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCL 794
Query: 384 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 443
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 795 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 853
Query: 444 GVDDIIGFDFMEKPSRASIIKSLEQLFLL----GALTDDCKLSDPVGHQMARLPLDPIYS 499
+ + +F+ K + IK++++ +L G L D + +G ++A + DP +
Sbjct: 854 HMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVL-DQREYLTTLGQRLAHISTDPRLA 912
Query: 500 KALIVAGQFNCLEEMLITVAMLS 522
KA+++A F CL +L+ V+ L+
Sbjct: 913 KAIVLAAIFRCLHPLLVVVSCLT 935
Score = 177 (67.4 bits), Expect = 6.3e-47, Sum P(2) = 6.3e-47
Identities = 45/158 (28%), Positives = 77/158 (48%)
Query: 30 RRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK- 88
RR + Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 451 RRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGRG 509
Query: 89 ---LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRI 135
+ +TQP E G L + VG+ +R + + + +
Sbjct: 510 ARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILL 569
Query: 136 KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
++ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 570 RKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 607
Score = 81 (33.6 bits), Expect = 7.6e-37, Sum P(2) = 7.6e-37
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 168 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 227
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 568 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 620
Query: 228 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+ D FS YFG + V G +PV+ Y
Sbjct: 621 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 650
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 380 (138.8 bits), Expect = 8.0e-47, Sum P(2) = 8.0e-47
Identities = 92/263 (34%), Positives = 148/263 (56%)
Query: 266 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 323
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 676 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 732
Query: 324 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 383
++P Q +F G RK++LATNIAETS+TI I +V+D G K YD + L
Sbjct: 733 NIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCL 792
Query: 384 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 443
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 793 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAK-I 851
Query: 444 GVDDIIGFDFMEKPSRASIIKSLEQLFLL----GALTDDCKLSDPVGHQMARLPLDPIYS 499
+ + +F+ K + IK++++ +L G L D + +G ++A + DP +
Sbjct: 852 HMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVL-DQREYLTTLGQRLAHISTDPRLA 910
Query: 500 KALIVAGQFNCLEEMLITVAMLS 522
KA+++A F CL +L+ V+ L+
Sbjct: 911 KAIVLAAIFRCLHPLLVVVSCLT 933
Score = 176 (67.0 bits), Expect = 8.0e-47, Sum P(2) = 8.0e-47
Identities = 44/158 (27%), Positives = 77/158 (48%)
Query: 30 RRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK- 88
RR + Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 449 RRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGRG 507
Query: 89 ---LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRI 135
+ +TQP E G L + VG+ +R + + + +
Sbjct: 508 ARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILL 567
Query: 136 KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
++ +P L S ++VDE HER V+TD LL LLK +Q
Sbjct: 568 RKLQSNPSLEGVSHVVVDEVHERDVNTDFLLILLKGLQ 605
Score = 81 (33.6 bits), Expect = 7.6e-37, Sum P(2) = 7.6e-37
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 168 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 227
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 566 LLRKLQS--NPSLEGVSHVVV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 618
Query: 228 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+ D FS YFG + V G +PV+ Y
Sbjct: 619 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 648
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 380 (138.8 bits), Expect = 8.7e-47, Sum P(2) = 8.7e-47
Identities = 92/263 (34%), Positives = 148/263 (56%)
Query: 266 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 323
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 622 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 678
Query: 324 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 383
++P Q +F G RK++LATNIAETS+TI I +V+D G K YD + L
Sbjct: 679 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCL 738
Query: 384 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 443
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 739 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 797
Query: 444 GVDDIIGFDFMEKPSRASIIKSLEQLFLL----GALTDDCKLSDPVGHQMARLPLDPIYS 499
+ + +F+ K + IK++++ +L G L D + +G ++A + DP +
Sbjct: 798 HMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVL-DQREYLTTLGQRLAHISTDPRLA 856
Query: 500 KALIVAGQFNCLEEMLITVAMLS 522
KA+++A F CL +L+ V+ L+
Sbjct: 857 KAIVLAAIFRCLHPLLVVVSCLT 879
Score = 175 (66.7 bits), Expect = 8.7e-47, Sum P(2) = 8.7e-47
Identities = 45/158 (28%), Positives = 77/158 (48%)
Query: 30 RRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK- 88
RR + Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 395 RRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRG 453
Query: 89 ---LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRI 135
+ +TQP E G L + VG+ +R + + + +
Sbjct: 454 ARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILL 513
Query: 136 KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
++ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 514 RKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 551
Score = 81 (33.6 bits), Expect = 6.5e-37, Sum P(2) = 6.5e-37
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 168 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 227
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 512 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 564
Query: 228 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+ D FS YFG + V G +PV+ Y
Sbjct: 565 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 594
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 380 (138.8 bits), Expect = 9.5e-47, Sum P(2) = 9.5e-47
Identities = 92/263 (34%), Positives = 148/263 (56%)
Query: 266 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 323
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 706
Query: 324 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 383
++P Q +F G RK++LATNIAETS+TI I +V+D G K YD + L
Sbjct: 707 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCL 766
Query: 384 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 443
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 767 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 825
Query: 444 GVDDIIGFDFMEKPSRASIIKSLEQLFLL----GALTDDCKLSDPVGHQMARLPLDPIYS 499
+ + +F+ K + IK++++ +L G L D + +G ++A + DP +
Sbjct: 826 HMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVL-DQREYLTTLGQRLAHISTDPRLA 884
Query: 500 KALIVAGQFNCLEEMLITVAMLS 522
KA+++A F CL +L+ V+ L+
Sbjct: 885 KAIVLAAIFRCLHPLLVVVSCLT 907
Score = 175 (66.7 bits), Expect = 9.5e-47, Sum P(2) = 9.5e-47
Identities = 45/158 (28%), Positives = 77/158 (48%)
Query: 30 RRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK- 88
RR + Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 423 RRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRG 481
Query: 89 ---LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRI 135
+ +TQP E G L + VG+ +R + + + +
Sbjct: 482 ARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILL 541
Query: 136 KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
++ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 542 RKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 579
Score = 81 (33.6 bits), Expect = 7.1e-37, Sum P(2) = 7.1e-37
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 168 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 227
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 540 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 592
Query: 228 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+ D FS YFG + V G +PV+ Y
Sbjct: 593 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 379 (138.5 bits), Expect = 1.2e-46, Sum P(2) = 1.2e-46
Identities = 91/263 (34%), Positives = 148/263 (56%)
Query: 266 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 323
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 706
Query: 324 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 383
++P Q +F G RK++LATNIAETS+T+ I +V+D G K YD + L
Sbjct: 707 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 766
Query: 384 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 443
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 767 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 825
Query: 444 GVDDIIGFDFMEKPSRASIIKSLEQLFLL----GALTDDCKLSDPVGHQMARLPLDPIYS 499
+ + +F+ K + IK++++ +L G L D + +G ++A + DP +
Sbjct: 826 HMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVL-DQREYLTTLGQRLAHISTDPRLA 884
Query: 500 KALIVAGQFNCLEEMLITVAMLS 522
KA+++A F CL +L+ V+ L+
Sbjct: 885 KAIVLAAIFRCLHPLLVVVSCLT 907
Score = 175 (66.7 bits), Expect = 1.2e-46, Sum P(2) = 1.2e-46
Identities = 45/158 (28%), Positives = 77/158 (48%)
Query: 30 RRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK- 88
RR + Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 423 RRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVSEGRG 481
Query: 89 ---LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRI 135
+ +TQP E G L + VG+ +R + + + +
Sbjct: 482 ARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILL 541
Query: 136 KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
++ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 542 RKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 579
Score = 81 (33.6 bits), Expect = 9.3e-37, Sum P(2) = 9.3e-37
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 168 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 227
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 540 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 592
Query: 228 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+ D FS YFG + V G +PV+ Y
Sbjct: 593 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 327 (120.2 bits), Expect = 1.3e-46, Sum P(3) = 1.3e-46
Identities = 90/241 (37%), Positives = 128/241 (53%)
Query: 282 PGDILVFLTGQEEIESVERLVQERLLQLPE-ASRKLVTVPIFSSLPSEQQMRVFAPAAAG 340
PG +LVFL G I ++ Q+ L P S +P+ S +P ++Q +VF P G
Sbjct: 652 PGAVLVFLPGWNLIYAM----QKHLEMNPHFGSHSYCILPLHSQIPRDEQRKVFDPVPDG 707
Query: 341 FRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRA 400
KVIL+TNIAETS+TI + YVID K +L+ M + V SK QR GRA
Sbjct: 708 IIKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRA 767
Query: 401 GREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGF--DFMEKPS 458
GR PG CF L + FDKLE PEI R L V L +K L + I F +E P
Sbjct: 768 GRVRPGFCFHLCSKARFDKLETHLTPEIFRTPLHEVALSIKLLRLGGIGHFLSKAIEPPP 827
Query: 459 RASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITV 518
++I++ L L AL + +L+ P+G +A+LP++P K +I+ F + + L T+
Sbjct: 828 LDAVIEAEHTLRELDALDSNDELT-PLGRILAKLPIEPRLGKMMIIGCIFY-VGDALCTI 885
Query: 519 A 519
+
Sbjct: 886 S 886
Score = 198 (74.8 bits), Expect = 1.3e-46, Sum P(3) = 1.3e-46
Identities = 57/188 (30%), Positives = 96/188 (51%)
Query: 3 SVAEGEVSNSTHNP---KLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDI 59
++ EG ++ +T +L ++ ++ +++L R+SLP+ E+ ++ V + +
Sbjct: 349 NIDEGPLAFATQEQISLELKNEHMYHIQDPNIKQVLIDRESLPVKKFEEEIMHAVHNSPV 408
Query: 60 LIIVGETGSGKTTQLPQFLFHAGFCRDGKL----IGVTQPXXXXXXXXXXXXXEESGVEL 115
+II G TG GKTTQ+PQ++ + R+ + I VTQP E G E+
Sbjct: 409 VIIRGATGCGKTTQVPQYILDE-YIRNDRAAQCNIVVTQPRRISAVSVAERVAFERGEEI 467
Query: 116 GQRVGYSIRFDD---RTSTST---RIKEAL--LDPYLSRYSAIIVDEAHERTVHTDVLLG 167
G+ GYS+RF+ R S + L L+ + S +IVDE HER ++TD LL
Sbjct: 468 GKSCGYSVRFESVLPRPHASMLFCTVGVLLRKLESGIRGISHVIVDEIHERDINTDFLLV 527
Query: 168 LLKKVQNA 175
+L+ V A
Sbjct: 528 VLRDVIQA 535
Score = 86 (35.3 bits), Expect = 1.3e-46, Sum P(3) = 1.3e-46
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 194 DMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 253
D I +R +T+ + + + + F +++I+MSA++D F EYF + V GR FPV
Sbjct: 513 DEIHERDINTDFLLVVLRDVIQAFPEIRVILMSATIDTSMFCEYFFNCPIIEVFGRTFPV 572
Query: 254 EILY 257
+ Y
Sbjct: 573 QEYY 576
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 380 (138.8 bits), Expect = 1.3e-46, Sum P(2) = 1.3e-46
Identities = 92/263 (34%), Positives = 148/263 (56%)
Query: 266 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 323
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 676 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 732
Query: 324 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 383
++P Q +F G RK++LATNIAETS+TI I +V+D G K YD + L
Sbjct: 733 NIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCL 792
Query: 384 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 443
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 793 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAK-I 851
Query: 444 GVDDIIGFDFMEKPSRASIIKSLEQLFLL----GALTDDCKLSDPVGHQMARLPLDPIYS 499
+ + +F+ K + IK++++ +L G L D + +G ++A + DP +
Sbjct: 852 HMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVL-DQREYLTTLGQRLAHISTDPRLA 910
Query: 500 KALIVAGQFNCLEEMLITVAMLS 522
KA+++A F CL +L+ V+ L+
Sbjct: 911 KAIVLAAIFRCLHPLLVVVSCLT 933
Score = 174 (66.3 bits), Expect = 1.3e-46, Sum P(2) = 1.3e-46
Identities = 44/158 (27%), Positives = 77/158 (48%)
Query: 30 RRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK- 88
RR + Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 449 RRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGRG 507
Query: 89 ---LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRI 135
+ +TQP E G L + VG+ +R + + + +
Sbjct: 508 ARCNVIITQPRRISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGILL 567
Query: 136 KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
++ +P L S ++VDE HER V+TD LL LLK +Q
Sbjct: 568 RKLQSNPSLEGVSHVVVDEEHERDVNTDFLLILLKGLQ 605
Score = 78 (32.5 bits), Expect = 1.6e-36, Sum P(2) = 1.6e-36
Identities = 23/70 (32%), Positives = 40/70 (57%)
Query: 193 SDMILDRGNDTNGINT---LKQCQG-RKFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQ 247
S +++D ++ + +NT L +G ++ P L+L++MSA+ D FS YFG + V
Sbjct: 580 SHVVVDEEHERD-VNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 638
Query: 248 GRQFPVEILY 257
G +PV+ Y
Sbjct: 639 GFMYPVKEHY 648
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 379 (138.5 bits), Expect = 1.6e-46, Sum P(2) = 1.6e-46
Identities = 91/263 (34%), Positives = 148/263 (56%)
Query: 266 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 323
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 681 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 737
Query: 324 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 383
++P Q +F G RK++LATNIAETS+T+ I +V+D G K YD + L
Sbjct: 738 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 797
Query: 384 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 443
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 798 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 856
Query: 444 GVDDIIGFDFMEKPSRASIIKSLEQLFLL----GALTDDCKLSDPVGHQMARLPLDPIYS 499
+ + +F+ K + IK++++ +L G L D + +G ++A + DP +
Sbjct: 857 HMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVL-DQREYLTTLGQRLAHISTDPRLA 915
Query: 500 KALIVAGQFNCLEEMLITVAMLS 522
KA+++A F CL +L+ V+ L+
Sbjct: 916 KAIVLAAIFRCLHPLLVVVSCLT 938
Score = 175 (66.7 bits), Expect = 1.6e-46, Sum P(2) = 1.6e-46
Identities = 45/158 (28%), Positives = 77/158 (48%)
Query: 30 RRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK- 88
RR + Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 451 RRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVSEGRG 509
Query: 89 ---LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRI 135
+ +TQP E G L + VG+ +R + + + +
Sbjct: 510 ARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILL 569
Query: 136 KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
++ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 570 RKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 607
Score = 81 (33.6 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 168 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 227
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 568 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 620
Query: 228 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+ D FS YFG + V G +PV+ Y
Sbjct: 621 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 650
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 379 (138.5 bits), Expect = 1.6e-46, Sum P(2) = 1.6e-46
Identities = 91/263 (34%), Positives = 148/263 (56%)
Query: 266 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 323
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 678 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 734
Query: 324 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 383
++P Q +F G RK++LATNIAETS+T+ I +V+D G K YD + L
Sbjct: 735 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 794
Query: 384 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 443
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 795 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 853
Query: 444 GVDDIIGFDFMEKPSRASIIKSLEQLFLL----GALTDDCKLSDPVGHQMARLPLDPIYS 499
+ + +F+ K + IK++++ +L G L D + +G ++A + DP +
Sbjct: 854 HMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVL-DQREYLTTLGQRLAHISTDPRLA 912
Query: 500 KALIVAGQFNCLEEMLITVAMLS 522
KA+++A F CL +L+ V+ L+
Sbjct: 913 KAIVLAAIFRCLHPLLVVVSCLT 935
Score = 175 (66.7 bits), Expect = 1.6e-46, Sum P(2) = 1.6e-46
Identities = 45/158 (28%), Positives = 77/158 (48%)
Query: 30 RRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK- 88
RR + Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 451 RRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVSEGRG 509
Query: 89 ---LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRI 135
+ +TQP E G L + VG+ +R + + + +
Sbjct: 510 ARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILL 569
Query: 136 KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
++ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 570 RKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 607
Score = 81 (33.6 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 168 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 227
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 568 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 620
Query: 228 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+ D FS YFG + V G +PV+ Y
Sbjct: 621 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 650
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 378 (138.1 bits), Expect = 1.7e-46, Sum P(2) = 1.7e-46
Identities = 91/263 (34%), Positives = 148/263 (56%)
Query: 266 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 323
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 706
Query: 324 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 383
++P Q +F G RK++LATNIAETS+T+ I +V+D G K YD + L
Sbjct: 707 NIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 766
Query: 384 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 443
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 767 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 825
Query: 444 GVDDIIGFDFMEKPSRASIIKSLEQLFLL----GALTDDCKLSDPVGHQMARLPLDPIYS 499
+ + +F+ K + IK++++ +L G L D + +G ++A + DP +
Sbjct: 826 HMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVL-DQREYLTTLGQRLAHISTDPRLA 884
Query: 500 KALIVAGQFNCLEEMLITVAMLS 522
KA+++A F CL +L+ V+ L+
Sbjct: 885 KAIVLAAIFRCLHPLLVVVSCLT 907
Score = 176 (67.0 bits), Expect = 1.7e-46, Sum P(2) = 1.7e-46
Identities = 46/158 (29%), Positives = 77/158 (48%)
Query: 30 RRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK- 88
RR I Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 423 RRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRG 481
Query: 89 ---LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRI 135
+ +TQP E G L + VG+ +R + + + +
Sbjct: 482 ARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILL 541
Query: 136 KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
++ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 542 RKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 579
Score = 81 (33.6 bits), Expect = 1.6e-36, Sum P(2) = 1.6e-36
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 168 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 227
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 540 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 592
Query: 228 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+ D FS YFG + V G +PV+ Y
Sbjct: 593 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 378 (138.1 bits), Expect = 1.7e-46, Sum P(2) = 1.7e-46
Identities = 91/263 (34%), Positives = 148/263 (56%)
Query: 266 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 323
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 706
Query: 324 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 383
++P Q +F G RK++LATNIAETS+T+ I +V+D G K YD + L
Sbjct: 707 NIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 766
Query: 384 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 443
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 767 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 825
Query: 444 GVDDIIGFDFMEKPSRASIIKSLEQLFLL----GALTDDCKLSDPVGHQMARLPLDPIYS 499
+ + +F+ K + IK++++ +L G L D + +G ++A + DP +
Sbjct: 826 HMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVL-DQREYLTTLGQRLAHISTDPRLA 884
Query: 500 KALIVAGQFNCLEEMLITVAMLS 522
KA+++A F CL +L+ V+ L+
Sbjct: 885 KAIVLAAIFRCLHPLLVVVSCLT 907
Score = 176 (67.0 bits), Expect = 1.7e-46, Sum P(2) = 1.7e-46
Identities = 46/158 (29%), Positives = 77/158 (48%)
Query: 30 RRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK- 88
RR I Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 423 RRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRG 481
Query: 89 ---LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRI 135
+ +TQP E G L + VG+ +R + + + +
Sbjct: 482 ARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILL 541
Query: 136 KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
++ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 542 RKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 579
Score = 81 (33.6 bits), Expect = 1.6e-36, Sum P(2) = 1.6e-36
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 168 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 227
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 540 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 592
Query: 228 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+ D FS YFG + V G +PV+ Y
Sbjct: 593 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 378 (138.1 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 91/263 (34%), Positives = 148/263 (56%)
Query: 266 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 323
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 673 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 729
Query: 324 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 383
++P Q +F G RK++LATNIAETS+T+ I +V+D G K YD + L
Sbjct: 730 NIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 789
Query: 384 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 443
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 790 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 848
Query: 444 GVDDIIGFDFMEKPSRASIIKSLEQLFLL----GALTDDCKLSDPVGHQMARLPLDPIYS 499
+ + +F+ K + IK++++ +L G L D + +G ++A + DP +
Sbjct: 849 HMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVL-DQREYLTTLGQRLAHISTDPRLA 907
Query: 500 KALIVAGQFNCLEEMLITVAMLS 522
KA+++A F CL +L+ V+ L+
Sbjct: 908 KAIVLAAIFRCLHPLLVVVSCLT 930
Score = 176 (67.0 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 46/158 (29%), Positives = 77/158 (48%)
Query: 30 RRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK- 88
RR I Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 446 RRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRG 504
Query: 89 ---LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRI 135
+ +TQP E G L + VG+ +R + + + +
Sbjct: 505 ARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILL 564
Query: 136 KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
++ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 565 RKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 602
Score = 81 (33.6 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 168 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 227
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 563 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 615
Query: 228 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+ D FS YFG + V G +PV+ Y
Sbjct: 616 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 645
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 378 (138.1 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 91/263 (34%), Positives = 148/263 (56%)
Query: 266 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 323
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 678 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 734
Query: 324 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 383
++P Q +F G RK++LATNIAETS+T+ I +V+D G K YD + L
Sbjct: 735 NIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 794
Query: 384 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 443
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 795 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 853
Query: 444 GVDDIIGFDFMEKPSRASIIKSLEQLFLL----GALTDDCKLSDPVGHQMARLPLDPIYS 499
+ + +F+ K + IK++++ +L G L D + +G ++A + DP +
Sbjct: 854 HMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVL-DQREYLTTLGQRLAHISTDPRLA 912
Query: 500 KALIVAGQFNCLEEMLITVAMLS 522
KA+++A F CL +L+ V+ L+
Sbjct: 913 KAIVLAAIFRCLHPLLVVVSCLT 935
Score = 176 (67.0 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 46/158 (29%), Positives = 77/158 (48%)
Query: 30 RRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK- 88
RR I Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 451 RRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRG 509
Query: 89 ---LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRI 135
+ +TQP E G L + VG+ +R + + + +
Sbjct: 510 ARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILL 569
Query: 136 KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
++ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 570 RKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 607
Score = 81 (33.6 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 168 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 227
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 568 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 620
Query: 228 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+ D FS YFG + V G +PV+ Y
Sbjct: 621 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 650
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 319 (117.4 bits), Expect = 2.2e-46, Sum P(4) = 2.2e-46
Identities = 79/210 (37%), Positives = 114/210 (54%)
Query: 332 RVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKA 391
+VF G RK+++ATNIAETS+TI + YVID G +K +D + ++ +SKA
Sbjct: 515 QVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 574
Query: 392 QALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGF 451
A QR GRAGR PG C+ LY L+D PEI R L + LQ+K L + I F
Sbjct: 575 NAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYF 634
Query: 452 --DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFN 509
M+ PS ++ S++ L L AL +L+ P+G +ARLP++P K ++ F
Sbjct: 635 LSRLMDPPSDEAVSLSIKHLMELNALDKQEELT-PLGVHLARLPVEPHIGKMILFGALFC 693
Query: 510 CLEEMLITVAMLSVESIFFRSPGEVRRGKK 539
CL+ +L A LS F+ P + GK+
Sbjct: 694 CLDPVLTIAASLS-----FKDPFVIPLGKE 718
Score = 160 (61.4 bits), Expect = 2.2e-46, Sum P(4) = 2.2e-46
Identities = 48/155 (30%), Positives = 70/155 (45%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK----LIGVT 93
R+ LP ++K LV + + + +I GETG GKTTQ+ QF+ + GK I T
Sbjct: 198 REKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD-DYIERGKGSACRIVCT 256
Query: 94 QPXXXXXXXXXXXXXEESGVELGQ--RVGYSIRFDDRT----------STSTRIKEALLD 141
QP E G GY IR R +T ++ D
Sbjct: 257 QPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD 316
Query: 142 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
+LS S I++DE HER + +DVL+ ++K + N R
Sbjct: 317 SHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFR 351
Score = 102 (41.0 bits), Expect = 2.2e-46, Sum P(4) = 2.2e-46
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 217 FAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 259
F P LK+I+MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 350 FRPDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 392
Score = 62 (26.9 bits), Expect = 2.2e-46, Sum P(4) = 2.2e-46
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 262 EPDYLDATLITIFQVH--LDEAPGDILVFLTGQEEIESVERLVQERLL 307
+ D +D LI H L+E G ILVFL G + I ++ L+ +++
Sbjct: 460 DDDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM 507
Score = 38 (18.4 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 293 EEIESVERLVQERLLQLPEASRKLV-TVPIFSSLPSEQQMRVFAPAAAGFRKVILATN 349
+E E ER V + E +L+ +V + SE Q+ FAP G+ I A N
Sbjct: 70 KEAERQERAVVHMDERREEQIVQLLHSVQAKNDKDSEAQISWFAPEDHGYGTEIPAEN 127
>UNIPROTKB|E2QXW1 [details] [associations]
symbol:DQX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:165545 KO:K14433 OMA:CGQAVQA
EMBL:AAEX03010965 RefSeq:XP_532994.2 Ensembl:ENSCAFT00000013395
GeneID:475784 KEGG:cfa:475784 NextBio:20851558 Uniprot:E2QXW1
Length = 719
Score = 347 (127.2 bits), Expect = 2.5e-46, Sum P(2) = 2.5e-46
Identities = 104/318 (32%), Positives = 168/318 (52%)
Query: 222 LIIMSASLDARGFSEYFGCAKAVHV-QGR-QFPVEILYTLYPEPDYLDATLITIFQVHLD 279
+++ +L+ + ++G VHV +G P + + P D ++A + ++
Sbjct: 201 VVVTDPALEPK-LQAFWGNPTIVHVPRGPGACPTPVYRDIVPT-DRVEAACQAVLELCAK 258
Query: 280 EAPGDILVFLTGQEEI----ESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFA 335
EAPGD+LV+L +EEI ES+ R V+ L+ P R L P P+ Q +
Sbjct: 259 EAPGDVLVYLPSEEEILQCCESLSREVEPLALRGPPP-RVLPLHPGHG--PAVQA--AYE 313
Query: 336 PAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQ 395
G RKV++ +A+ S ++P I++VID G +Y+P ES ++ PIS+ QA
Sbjct: 314 DIDLGARKVVVTHWLADFSFSLPSIRHVIDSGLELRSVYNPQIRAESQVLRPISRCQAEA 373
Query: 396 RSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRC--NLSNVILQLKALGVDDIIGFDF 453
R RA PG C LYPE+ F +LE P + C NLS ++L LK + + F
Sbjct: 374 RRLRARGIPPGSCICLYPES-FLELEAPLLPPPRVCEENLSPMVLLLKRRQIAEPGECHF 432
Query: 454 MEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEE 513
+++P+ +++++LE L L AL DD LSD +G ++ PL P +KAL+ + +F+C++E
Sbjct: 433 LDRPAPEALMQALEDLDYLAALDDDGNLSD-LGVILSEFPLPPELAKALLASCEFDCVDE 491
Query: 514 MLITVAMLSVESIFFRSP 531
ML AML+ F P
Sbjct: 492 MLTLAAMLTAAPGFTHPP 509
Score = 206 (77.6 bits), Expect = 2.5e-46, Sum P(2) = 2.5e-46
Identities = 66/198 (33%), Positives = 103/198 (52%)
Query: 2 PSVAEGEVSNSTHNPKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKND--I 59
PS E E++ NP PF SSR ++L+QR++LPI + +E++ + +
Sbjct: 14 PSPGESELAV---NP-FDGLPF----SSRYYELLEQRRALPIWATRFIFLEQLESSPSGV 65
Query: 60 LIIVGETGSGKTTQLPQ----FLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVEL 115
+++ GE GSGK+TQ+PQ F GF ++G+ + VTQP +E + L
Sbjct: 66 VLVSGEPGSGKSTQIPQWCAEFALARGF-KEGR-VTVTQPYPLAALSLAVRVADEMDLTL 123
Query: 116 GQRVGYSIRFDDRTSTSTRIK----EALLDPYLSR-----YSAIIVDEAHERTVHTDVLL 166
GQ VGYSI +D T T ++ LL S + +++DEA ER+V +D+L
Sbjct: 124 GQEVGYSIPQEDCTGPDTLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVASDLLQ 183
Query: 167 GLLKKVQNARSKSADGHS 184
GLL+ NA+ + G S
Sbjct: 184 GLLR---NAKLGNLPGDS 198
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 439 (159.6 bits), Expect = 2.8e-46, Sum P(2) = 2.8e-46
Identities = 120/327 (36%), Positives = 180/327 (55%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDAT---------- 269
LKLI+MSA+++ F YF A V V GR FP+++ + +P ++D +
Sbjct: 216 LKLILMSATINLDLFKGYFEGAPVVQVPGRLFPIDVRW--HPIKQFIDQSDKKTHKIDPE 273
Query: 270 -LITIFQVHLDEAP----GDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 324
+ I ++ + P GD L+FL G EI +V E L E + + + + S+
Sbjct: 274 PYLKILELIDKQFPSTQRGDALIFLNGVAEIS----MVAEHLKNYAELTNGWIILMLHST 329
Query: 325 LPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLL 384
L E+Q +VF A G RK IL+TN+AETSVTI GI++VID G V ++P G + L
Sbjct: 330 LSVEEQDKVFDQAPVGIRKCILSTNVAETSVTIDGIRFVIDSGKVNLIKHEPGTGTQKLT 389
Query: 385 VVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALG 444
+SKA A QR GRAGR GPG C+RLY + +F+K++D T EI R +L + L++ +L
Sbjct: 390 EFWVSKASANQRKGRAGRTGPGICYRLYSQEQFEKMDDFTVSEINRVSLQEMALKMISLN 449
Query: 445 VD-DIIGFDFMEKPSRASIIKSLEQLFLLGAL-TD--DCKLSDPVGHQMARLPLDPIYSK 500
+ D F F+EKPS + + LE L L +D D +G+ +++LP++ +K
Sbjct: 450 LGLDPRTFPFIEKPSEDVLNEGLEVLKFQRVLRSDRGDILTLTALGNMVSKLPVEVPIAK 509
Query: 501 ALIVAGQFNCLEEMLITVAMLSVESIF 527
L+ + LE ML A LSV+S F
Sbjct: 510 MLVYGCVVDELEVMLTVAAGLSVQSPF 536
Score = 84 (34.6 bits), Expect = 2.8e-46, Sum P(2) = 2.8e-46
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 141 DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
D L +Y+ II+DE HER + +D+L+GLL+ + R
Sbjct: 178 DSLLEKYNVIILDEVHERHLTSDLLIGLLRDLCTKR 213
>UNIPROTKB|Q8TE96 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
EMBL:AC005041 HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AK074337 EMBL:AK092420 EMBL:BC075018
IPI:IPI00385794 IPI:IPI00843897 IPI:IPI00844595 RefSeq:NP_598376.2
UniGene:Hs.191705 ProteinModelPortal:Q8TE96 SMR:Q8TE96
STRING:Q8TE96 PhosphoSite:Q8TE96 DMDM:145558898 PaxDb:Q8TE96
PRIDE:Q8TE96 Ensembl:ENST00000393951 Ensembl:ENST00000404568
GeneID:165545 KEGG:hsa:165545 UCSC:uc010yrw.2 GeneCards:GC02M074745
H-InvDB:HIX0200286 HGNC:HGNC:20410 HPA:HPA039158 neXtProt:NX_Q8TE96
PharmGKB:PA134916600 InParanoid:Q8TE96 GenomeRNAi:165545
NextBio:88548 ArrayExpress:Q8TE96 Bgee:Q8TE96 CleanEx:HS_DQX1
Genevestigator:Q8TE96 Uniprot:Q8TE96
Length = 717
Score = 351 (128.6 bits), Expect = 4.2e-46, Sum P(2) = 4.2e-46
Identities = 105/319 (32%), Positives = 171/319 (53%)
Query: 222 LIIMSASLDARGFSEYFGCAKAVHV--QGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
+++ +L+ + ++G VH+ + + P I + P PD ++A + ++
Sbjct: 201 VVVTDPALEPK-LRAFWGNPPIVHIPREPGERPSPIYWDTIP-PDRVEAACQAVLELCRK 258
Query: 280 EAPGDILVFLTGQEEI----ESVERLVQERLLQ-LPEASRKLVTVPIFSSLPSEQQMRVF 334
E PGD+LVFL +EEI ES+ R V+ LLQ LP +P+ Q V+
Sbjct: 259 ELPGDVLVFLPSEEEISLCCESLSREVESLLLQGLPPR-----VLPLHPDCGRAVQA-VY 312
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
A RKV++ +A+ S ++P I++VID G +Y+P E ++ PISK QA
Sbjct: 313 EDMDA--RKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAE 370
Query: 395 QRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRC--NLSNVILQLKALGVDDIIGFD 452
R RA PG C LYP++ F +LE P+ + C NLS+++L LK + +
Sbjct: 371 ARRLRARGFPPGSCLCLYPKS-FLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECH 429
Query: 453 FMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLE 512
F+++P+ +++++LE L L AL DD LSD +G ++ PL P +KAL+ + +F+C++
Sbjct: 430 FLDQPAPEALMQALEDLDYLAALDDDGDLSD-LGVILSEFPLAPELAKALLASCEFDCVD 488
Query: 513 EMLITVAMLSVESIFFRSP 531
EML AML+ F R P
Sbjct: 489 EMLTLAAMLTAAPGFTRPP 507
Score = 199 (75.1 bits), Expect = 4.2e-46, Sum P(2) = 4.2e-46
Identities = 66/196 (33%), Positives = 100/196 (51%)
Query: 2 PSVAEGEVSNSTHNPKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKND--I 59
PS E E++ NP PF SSR ++L+QR++LPI + +E++ N +
Sbjct: 14 PSPGESELAV---NP-FDGLPF----SSRYYELLKQRQALPIWAARFTFLEQLESNPTGV 65
Query: 60 LIIVGETGSGKTTQLPQ----FLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVEL 115
+++ GE GSGK+TQ+PQ F GF + G+ + VTQP +E + L
Sbjct: 66 VLVSGEPGSGKSTQIPQWCAEFALARGF-QKGQ-VTVTQPYPLAARSLALRVADEMDLTL 123
Query: 116 GQRVGYSIRFDDRTSTSTRIK----EALLDPYLSR-----YSAIIVDEAHERTVHTDVLL 166
G VGYSI +D T +T ++ LL S + +++DEA ER+V +D L
Sbjct: 124 GHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVASDSLQ 183
Query: 167 GLLKKVQNARSKSADG 182
GLL Q+AR + G
Sbjct: 184 GLL---QDARLEKLPG 196
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 373 (136.4 bits), Expect = 4.2e-46, Sum P(2) = 4.2e-46
Identities = 98/283 (34%), Positives = 157/283 (55%)
Query: 266 LDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQL--PEASRKLVTVPI 321
LD LIT + Q+ PG IL FL G +EI+ V Q+RLL++ + SR LV +P+
Sbjct: 693 LDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGV----QQRLLEMLGSQNSRYLV-LPV 747
Query: 322 FSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGME 381
S++P Q +F G RK++LATNIAETS+TI I +V+D G K YD +
Sbjct: 748 HSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVS 807
Query: 382 SLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLK 441
L V +SK+ +QR GRAGR G + L+P + DK+ PEI R L N+++Q K
Sbjct: 808 CLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAK 867
Query: 442 ALGVDDIIGFDFMEKPSRASIIKSLEQLFLL----GALTDDCKLSDPVGHQMARLPLDPI 497
+ + + +F+ K + IK++++ +L G L D + +G ++A++ DP
Sbjct: 868 -IHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVL-DQREALTTLGKRLAQISTDPR 925
Query: 498 YSKALIVAGQFNCLEEMLITVAMLSVE--SIFFRSPGEVRRGK 538
+KA+++A + CL +L+ V+ L+ + S ++ EV + K
Sbjct: 926 LAKAIVLASIYRCLHPLLVIVSCLTRDPFSSSLQNRAEVDKAK 968
Score = 180 (68.4 bits), Expect = 4.2e-46, Sum P(2) = 4.2e-46
Identities = 45/158 (28%), Positives = 78/158 (49%)
Query: 30 RRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK- 88
RR Q+ LP+ + ++ + +N +++I G+TG GKTT++PQ L + +G+
Sbjct: 467 RRGSSWQESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEH-YILEGRG 525
Query: 89 ---LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRI 135
+ +TQP +E G + + VGY +R + + + +
Sbjct: 526 ARCNVVITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILL 585
Query: 136 KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
++ +P L S ++VDE HER V+TD LL LLK +Q
Sbjct: 586 RKLQGNPSLEGVSHVVVDEVHERDVNTDFLLILLKGIQ 623
Score = 84 (34.6 bits), Expect = 5.1e-36, Sum P(2) = 5.1e-36
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 193 SDMILDRGNDTNGINT---LKQCQG-RKFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQ 247
S +++D ++ + +NT L +G +K P L+L++MSA+ D + FS YFG V V
Sbjct: 598 SHVVVDEVHERD-VNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGDCPVVKVP 656
Query: 248 GRQFPVEILY 257
G +PV+ Y
Sbjct: 657 GFMYPVKEYY 666
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 373 (136.4 bits), Expect = 4.2e-46, Sum P(2) = 4.2e-46
Identities = 98/283 (34%), Positives = 157/283 (55%)
Query: 266 LDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQL--PEASRKLVTVPI 321
LD LIT + Q+ PG IL FL G +EI+ V Q+RLL++ + SR LV +P+
Sbjct: 693 LDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGV----QQRLLEMLGSQNSRYLV-LPV 747
Query: 322 FSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGME 381
S++P Q +F G RK++LATNIAETS+TI I +V+D G K YD +
Sbjct: 748 HSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVS 807
Query: 382 SLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLK 441
L V +SK+ +QR GRAGR G + L+P + DK+ PEI R L N+++Q K
Sbjct: 808 CLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAK 867
Query: 442 ALGVDDIIGFDFMEKPSRASIIKSLEQLFLL----GALTDDCKLSDPVGHQMARLPLDPI 497
+ + + +F+ K + IK++++ +L G L D + +G ++A++ DP
Sbjct: 868 -IHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVL-DQREALTTLGKRLAQISTDPR 925
Query: 498 YSKALIVAGQFNCLEEMLITVAMLSVE--SIFFRSPGEVRRGK 538
+KA+++A + CL +L+ V+ L+ + S ++ EV + K
Sbjct: 926 LAKAIVLASIYRCLHPLLVIVSCLTRDPFSSSLQNRAEVDKAK 968
Score = 180 (68.4 bits), Expect = 4.2e-46, Sum P(2) = 4.2e-46
Identities = 45/158 (28%), Positives = 78/158 (49%)
Query: 30 RRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK- 88
RR Q+ LP+ + ++ + +N +++I G+TG GKTT++PQ L + +G+
Sbjct: 467 RRGSSWQESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEH-YILEGRG 525
Query: 89 ---LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRI 135
+ +TQP +E G + + VGY +R + + + +
Sbjct: 526 ARCNVVITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILL 585
Query: 136 KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
++ +P L S ++VDE HER V+TD LL LLK +Q
Sbjct: 586 RKLQGNPSLEGVSHVVVDEVHERDVNTDFLLILLKGIQ 623
Score = 84 (34.6 bits), Expect = 5.1e-36, Sum P(2) = 5.1e-36
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 193 SDMILDRGNDTNGINT---LKQCQG-RKFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQ 247
S +++D ++ + +NT L +G +K P L+L++MSA+ D + FS YFG V V
Sbjct: 598 SHVVVDEVHERD-VNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGGCPVVKVP 656
Query: 248 GRQFPVEILY 257
G +PV+ Y
Sbjct: 657 GFMYPVKEYY 666
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 327 (120.2 bits), Expect = 9.8e-46, Sum P(3) = 9.8e-46
Identities = 98/302 (32%), Positives = 151/302 (50%)
Query: 264 DYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 323
+ L+A L+ I ++ PG ILVFL G I ++ + +Q + + S+ + +P S
Sbjct: 638 ELLEALLMHIKSKNI---PGAILVFLPGWNLIFALMKFLQNTNI-FGDTSQYQI-LPCHS 692
Query: 324 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 383
+P ++Q +VF P G K+IL+TNIAETS+TI I +VID + +L+ + S
Sbjct: 693 QIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSY 752
Query: 384 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 443
V SK QR GRAGR PG CF L F LED+ PE+ R L + L +K L
Sbjct: 753 ATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALEDNLTPEMFRTPLHEMALTIKLL 812
Query: 444 GVDDIIGF--DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKA 501
+ I F +E P ++I++ L + L + +L+ P+G +ARLP++P K
Sbjct: 813 RLGSIHHFLSKALEPPPVDAVIEAEVLLREMRCLDANDELT-PLGRLLARLPIEPRLGKM 871
Query: 502 LIVAGQFNCLEEMLITVAMLSVES-IFFRSPGEVR--------RGKKCNE----IFCKSR 548
+++ F C + M I + S S +F G+ R G KC++ I
Sbjct: 872 MVLGAVFGCADLMAIMASYSSTFSEVFSLDIGQRRLANHQKALSGTKCSDHVAMIVASQM 931
Query: 549 WR 550
WR
Sbjct: 932 WR 933
Score = 185 (70.2 bits), Expect = 9.8e-46, Sum P(3) = 9.8e-46
Identities = 54/157 (34%), Positives = 79/157 (50%)
Query: 25 NDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFC 84
ND+ R+ L+ R+ LPIA++ ++ + N ++II G TG GKTTQ+ Q++ C
Sbjct: 370 NDNEYRQ--FLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYIC 427
Query: 85 --RDGKL-IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD---RTS-----TST 133
+ G I VTQP E +LG VGYS+RF+ R +
Sbjct: 428 SGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTV 487
Query: 134 RIKEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLK 170
+ L+ L S IIVDE HER V++D LL +L+
Sbjct: 488 GVLLRKLEAGLRGVSHIIVDEIHERDVNSDFLLVILR 524
Score = 91 (37.1 bits), Expect = 9.8e-46, Sum P(3) = 9.8e-46
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 217 FAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 254
+ L +I+MSA++D FS+YFG + V GR FPV+
Sbjct: 530 YPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQ 567
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 320 (117.7 bits), Expect = 1.1e-45, Sum P(3) = 1.1e-45
Identities = 82/225 (36%), Positives = 122/225 (54%)
Query: 282 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGF 341
PG +LVFL G I ++++ ++ S + +P+ S +P E+Q +VF P G
Sbjct: 653 PGAVLVFLPGWNLIYTMQKHLENNS---HFGSHRYQILPLHSQIPREEQRKVFDPVPDGV 709
Query: 342 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 401
KVIL+TNIAETS+TI + YVID K +L+ M + V SK QR GRAG
Sbjct: 710 TKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 769
Query: 402 REGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGF--DFMEKPSR 459
R PG CF L FD+LE PE+ R L + L +K L + I F +E P
Sbjct: 770 RVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPL 829
Query: 460 ASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIV 504
++I++ L L AL + +L+ P+G +A+LP++P + K +I+
Sbjct: 830 DAVIEAEHTLRELDALDANDELT-PLGRILAKLPIEPRFGKMMIM 873
Score = 203 (76.5 bits), Expect = 1.1e-45, Sum P(3) = 1.1e-45
Identities = 54/153 (35%), Positives = 81/153 (52%)
Query: 32 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL-- 89
Q +LQ+R+ LP+ E ++E + +N ++II G TG GKTTQ+PQ++ F ++ +
Sbjct: 382 QSVLQERELLPVKKFEAEILEAISQNSVVIIRGATGCGKTTQVPQYILD-DFIQNDRAAE 440
Query: 90 --IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD---RTSTSTR---IKEAL-- 139
I VTQP E G E G+ GYS+RF+ R S + L
Sbjct: 441 CNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK 500
Query: 140 LDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
L+ + S +IVDE HER ++TD LL +L+ V
Sbjct: 501 LEAGIRGISHVIVDEIHERDINTDFLLVVLRDV 533
Score = 79 (32.9 bits), Expect = 1.1e-45, Sum P(3) = 1.1e-45
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 217 FAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 254
+ +++++MSA++D F EYF + V GR FPV+
Sbjct: 537 YPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQ 574
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 373 (136.4 bits), Expect = 1.3e-45, Sum P(2) = 1.3e-45
Identities = 91/263 (34%), Positives = 147/263 (55%)
Query: 266 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 323
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 706
Query: 324 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 383
++P Q +F G RK++LATNIAETS TI I +V+D G K YD + L
Sbjct: 707 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCL 766
Query: 384 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 443
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 767 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 825
Query: 444 GVDDIIGFDFMEKPSRASIIKSLEQLFLL----GALTDDCKLSDPVGHQMARLPLDPIYS 499
+ + +F+ K + IK++++ +L G L D + +G ++A + +P +
Sbjct: 826 HMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVL-DQREYLTTLGQRLAHISTEPRLA 884
Query: 500 KALIVAGQFNCLEEMLITVAMLS 522
KA+++A F CL +L+ V+ L+
Sbjct: 885 KAIVLAAIFRCLHPLLVVVSCLT 907
Score = 175 (66.7 bits), Expect = 1.3e-45, Sum P(2) = 1.3e-45
Identities = 45/158 (28%), Positives = 77/158 (48%)
Query: 30 RRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK- 88
RR + Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 423 RRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRG 481
Query: 89 ---LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRI 135
+ +TQP E G L + VG+ +R + + + +
Sbjct: 482 ARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILL 541
Query: 136 KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
++ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 542 RKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 579
Score = 81 (33.6 bits), Expect = 9.5e-36, Sum P(2) = 9.5e-36
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 168 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 227
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 540 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 592
Query: 228 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+ D FS YFG + V G +PV+ Y
Sbjct: 593 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
>RGD|1591766 [details] [associations]
symbol:Dqx1 "DEAQ box RNA-dependent ATPase 1" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
RGD:1591766 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH473957
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
CTD:165545 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3 IPI:IPI00194915
RefSeq:NP_001102877.1 UniGene:Rn.154059 Ensembl:ENSRNOT00000011002
GeneID:680434 KEGG:rno:680434 UCSC:RGD:1591766 NextBio:718702
Uniprot:D4A474
Length = 717
Score = 357 (130.7 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 111/332 (33%), Positives = 179/332 (53%)
Query: 219 PLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPE--P-DYLDATLITIFQ 275
P +I+ ++L+ + F ++G + VHV R+ P E Y + P D ++A + +
Sbjct: 195 PRVVIVTDSALEPK-FQAFWGNSPTVHVP-RE-PGENPTLTYKDTVPADLVEAACQAVLE 251
Query: 276 V-HLDEAPGDILVFLTGQEEIE-SVERLVQER-LLQLPEASRKLVTVPIFSSLPSEQQMR 332
+ +EAPGD+LV+L +EEI E L +E +L +P +++ P+ Q
Sbjct: 252 LCQREEAPGDVLVYLPSEEEISLCCESLSREMGMLAVPGPLPRVL--PLHPGCGQAIQT- 308
Query: 333 VFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQ 392
V+ RK+++ +A+ S ++P I++VID G +Y+P ES ++ ISK Q
Sbjct: 309 VYEDTDVSVRKIVVTHWLADFSFSLPFIQHVIDSGLELRSVYNPRIRAESQVLRRISKCQ 368
Query: 393 ALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRC--NLSNVILQLKALGVDDIIG 450
A R RA PG C RLY ++ D LE P K C NLS+++L LK + +
Sbjct: 369 AEARLLRARGFPPGTCLRLYSKSTLD-LEAPPLPHPKVCEENLSSLVLLLKRKQIAEPGE 427
Query: 451 FDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNC 510
F+++P+ +++++LE L L AL DD LSD +G ++ PL P +KAL+ + +FNC
Sbjct: 428 CHFLDRPAPEALMQALEDLDYLAALDDDGDLSD-LGIILSEFPLPPELAKALLASCEFNC 486
Query: 511 LEEMLITVAMLSVESIFFRSP---GE--VRRG 537
++EML AML+ F R P GE +RRG
Sbjct: 487 VDEMLTLAAMLTAAPGFTRPPLCAGEAALRRG 518
Score = 186 (70.5 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 59/184 (32%), Positives = 94/184 (51%)
Query: 2 PSVAEGEVSNSTHNPKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKND--I 59
PS E E++ NP PF SS ++L+QR++LPI + +E + + +
Sbjct: 11 PSPGESELAV---NP-FDGLPF----SSCYYELLEQRRALPIWAARFLFLEHLESSPTGV 62
Query: 60 LIIVGETGSGKTTQLPQ----FLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVEL 115
+++ GE GSGK+TQ+PQ F GF + G+ + VTQP +E + L
Sbjct: 63 VLVSGEPGSGKSTQIPQWCAEFALARGF-QTGQ-VTVTQPYPLAAMSLASRVADEMDLTL 120
Query: 116 GQRVGYSIRFDDRTSTSTRIK----EALLDPYLSR-----YSAIIVDEAHERTVHTDVLL 166
G +GYSI +D T +T ++ L S +S +++DEA ER+V +D+L
Sbjct: 121 GHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVASTRGPGAWSVLVLDEAQERSVASDLLQ 180
Query: 167 GLLK 170
GLL+
Sbjct: 181 GLLR 184
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 321 (118.1 bits), Expect = 2.2e-45, Sum P(3) = 2.2e-45
Identities = 83/225 (36%), Positives = 122/225 (54%)
Query: 282 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGF 341
PG +LVFL G I ++++ ++ S + +P+ S +P E+Q +VF P G
Sbjct: 652 PGAVLVFLPGWNLIYTMQKHLENNS---HFGSHRYQILPLHSQIPREEQRKVFDPVPDGV 708
Query: 342 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 401
KVIL+TNIAETS+TI + YVID K +L+ M + V SK QR GRAG
Sbjct: 709 TKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 768
Query: 402 REGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGF--DFMEKPSR 459
R PG CF L FD+LE PE+ R L + L +K L + I F +E P
Sbjct: 769 RVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPL 828
Query: 460 ASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIV 504
+II++ L L AL + +L+ P+G +A+LP++P + K +I+
Sbjct: 829 DAIIEAEHTLRELDALDANDELT-PLGRILAKLPIEPRFGKMMIM 872
Score = 202 (76.2 bits), Expect = 2.2e-45, Sum P(3) = 2.2e-45
Identities = 54/153 (35%), Positives = 80/153 (52%)
Query: 32 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL-- 89
Q +LQ+R+ LP+ E ++E + N ++II G TG GKTTQ+PQ++ F ++ +
Sbjct: 381 QSVLQERELLPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQYILD-DFIQNDRAAE 439
Query: 90 --IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD---RTSTSTR---IKEAL-- 139
I VTQP E G E G+ GYS+RF+ R S + L
Sbjct: 440 CNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK 499
Query: 140 LDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 172
L+ + S +IVDE HER ++TD LL +L+ V
Sbjct: 500 LEAGIRGISHVIVDEIHERDINTDFLLVVLRDV 532
Score = 79 (32.9 bits), Expect = 2.2e-45, Sum P(3) = 2.2e-45
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 217 FAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 254
+ +++++MSA++D F EYF + V GR FPV+
Sbjct: 536 YPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQ 573
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 327 (120.2 bits), Expect = 4.3e-45, Sum P(3) = 4.3e-45
Identities = 91/280 (32%), Positives = 140/280 (50%)
Query: 260 YPEPDYLDATLITIFQVHLDEAP------GDILVFLTGQEEIESVERLVQ-ERLLQLPEA 312
Y P ++ LI +LD +P G +L+FL G I+ + L+ +R L +
Sbjct: 840 YMNPYKINLELILELLAYLDRSPQFKNTEGAVLIFLPGLAHIQQLYDLISTDRRFSLCDR 899
Query: 313 SRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 372
R + + S L ++ Q F G RK++LATNIAET +TIP + +VID G K
Sbjct: 900 HR---LIALHSVLSTQDQAAAFTVPPLGVRKIVLATNIAETGITIPDVVFVIDSGRTKEN 956
Query: 373 LYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCN 432
Y M SL +SKA ALQR GRAGR G CFR+Y + F+ + + PEI R
Sbjct: 957 RYHESSQMSSLEETFVSKASALQRQGRAGRVRDGFCFRMYTRDRFESFMEYSVPEILRVP 1016
Query: 433 LSNVILQLKALGVDDIIGFDFMEK---PSRASII-KSLEQLFLLGALT-DDCKLSDPVGH 487
L + L + + DF+ + P + +I ++ L +GA ++ KL+ P+G
Sbjct: 1017 LEELCLHIMKCNLGS--PEDFLSRALDPPQPQVIGNAMNLLRKIGACQLNEPKLT-PLGQ 1073
Query: 488 QMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 527
+A LP++ K LI F CL+ + A+++ +S F
Sbjct: 1074 HLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPF 1113
Score = 177 (67.4 bits), Expect = 4.3e-45, Sum P(3) = 4.3e-45
Identities = 43/117 (36%), Positives = 61/117 (52%)
Query: 27 SSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRD 86
SSSR QK L++R+ LP+ +VE ++K+ ++++ GETGSGK+TQ+P FL +
Sbjct: 560 SSSRYQKFLKERQELPVFKHRHSIVETLKKHRVVVVAGETGSGKSTQVPHFLLEDLLLDE 619
Query: 87 GKL---IGVTQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI 135
G I TQP EE G E G GY IR + RT +TR+
Sbjct: 620 GTRKCNIVCTQPRRISAVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTGEATRL 676
Score = 126 (49.4 bits), Expect = 8.7e-40, Sum P(3) = 8.7e-40
Identities = 38/99 (38%), Positives = 48/99 (48%)
Query: 93 TQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI----KEALL--- 140
TQP EE G E G GY IR + RT +TR+ LL
Sbjct: 629 TQPRRISAVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTGEATRLLYCTTGVLLRKL 688
Query: 141 --DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
D LS S +IVDE HER+VH+D LL +LK++ + RS
Sbjct: 689 QEDGLLSSISHVIVDEVHERSVHSDFLLVILKEILHKRS 727
Score = 94 (38.1 bits), Expect = 4.3e-45, Sum P(3) = 4.3e-45
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 216 KFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDAT 269
K + L LI+MSA++D+ FS YF + + GR +PVE+ + D ++AT
Sbjct: 725 KRSDLHLILMSATVDSEKFSSYFAHCPILRISGRSYPVEVFHV----EDVIEAT 774
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 373 (136.4 bits), Expect = 6.3e-45, Sum P(2) = 6.3e-45
Identities = 110/339 (32%), Positives = 176/339 (51%)
Query: 208 TLKQCQGRKFAPLKLIIMSASLD-ARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYL 266
TLK +G L+L + A+ E+ G ++ Q + + + T+ PE +
Sbjct: 502 TLKSKEG--ITALELAEKENQFETAQIIREHAGNIQSNSQQAQDLLDKYMATIKPEE--V 557
Query: 267 DATLIT--IFQVHLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFS 323
D LI + ++ D G ILVFL G EEI E+L+ +R S K + + + S
Sbjct: 558 DVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFA---HSAKFIILCLHS 614
Query: 324 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 383
+P+E+Q +VF G RK++LATNIAE++VTI + YVID G +K + YDP + +L
Sbjct: 615 RVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTL 674
Query: 384 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 443
+SKA A QR+GRAGR G C+ LY + L + PE+ R + + LQ+K L
Sbjct: 675 QSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKML 734
Query: 444 GVDDIIGFDFMEKPSRASIIKSLEQLFLL----GALTDDCKLSDPVGHQMARLPLDPIYS 499
+ + DF++K + +S+E ++ GALT + +L++ +G + +LP+ P S
Sbjct: 735 DPNCNVN-DFLQKLMDPPVAQSIENALIILKDIGALTPEEELTE-LGQKFGQLPVHPRIS 792
Query: 500 KALIVAGQFNCLEEMLITVAMLSVESIFFR--SPGEVRR 536
K + A NCL+ LI + F SPG+ ++
Sbjct: 793 KMIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRKK 831
Score = 172 (65.6 bits), Expect = 6.3e-45, Sum P(2) = 6.3e-45
Identities = 48/154 (31%), Positives = 73/154 (47%)
Query: 32 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLF-HAGFCRDG--K 88
++I + R LPIAS ++ V N +++I GETG GKTTQ+PQ+L H + K
Sbjct: 208 REIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACK 267
Query: 89 LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----KEALLDPYL 144
+I TQP E G +G+ VGY +R + + LL +
Sbjct: 268 II-CTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLI 326
Query: 145 SR--------YSAIIVDEAHERTVHTDVLLGLLK 170
+ + IIVDE HER ++D +L +L+
Sbjct: 327 GKGVNSSVPDITHIIVDEIHERDSYSDFMLMILR 360
Score = 97 (39.2 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
L+LI+MSA+LDA FSEYFG V V G +PV +
Sbjct: 369 LRLILMSATLDAERFSEYFGGCPVVRVPGFTYPVRTFF 406
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 313 (115.2 bits), Expect = 6.3e-45, Sum P(3) = 6.3e-45
Identities = 85/274 (31%), Positives = 141/274 (51%)
Query: 285 ILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRK 343
IL+FL G +EI + +R++ + + + + + + S++ + Q +V AG RK
Sbjct: 625 ILIFLPGYDEIVGLRDRILFDDK-RFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRK 683
Query: 344 VILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGRE 403
+IL+TNIAETS+T+ + +VID G VK + +D + + L +V ISKA A+QR GRAGR
Sbjct: 684 IILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGRC 743
Query: 404 GPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEK---PSRA 460
PG CFRL+ F + + PE+ R L + L K L + DF+ K P A
Sbjct: 744 RPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPA 803
Query: 461 SIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAM 520
I+++ Q+ D + +G+ +A LP++P K ++ A CL+ +L
Sbjct: 804 LIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACT 863
Query: 521 LSVESIFFRSPGEVRRGKKCNEIFCKSRWRSPHF 554
L+ F P + +K + C+ R+ + F
Sbjct: 864 LAYRDPFVL-PTQA--SQKRAAMLCRKRFTAGTF 894
Score = 194 (73.4 bits), Expect = 6.3e-45, Sum P(3) = 6.3e-45
Identities = 54/146 (36%), Positives = 77/146 (52%)
Query: 38 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK--LIGVTQP 95
R+SLP+ ++ +V+ +++N +++IVGETGSGKTTQ+PQFL F ++G I TQP
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 247
Query: 96 XXXXXXXXXXXXXEESGVELGQRVGYSIRFDDR-TSTSTRI----KEALL------DPYL 144
E +GQ +GY IR + R S T + LL D L
Sbjct: 248 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRRVSPKTLLTFCTNGVLLRTLMAGDSTL 307
Query: 145 SRYSAIIVDEAHERTVHTDVLLGLLK 170
S + +IVDE HER +D LL L+
Sbjct: 308 STVTHVIVDEVHERDRFSDFLLTKLR 333
Score = 92 (37.4 bits), Expect = 6.3e-45, Sum P(3) = 6.3e-45
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+K LKLI+ SA+LD F YFG +++QGR F V+ ++
Sbjct: 337 QKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMF 379
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 342 (125.4 bits), Expect = 1.0e-44, Sum P(3) = 1.0e-44
Identities = 96/284 (33%), Positives = 141/284 (49%)
Query: 259 LYPEPDYLDATLITIFQVHLDEAP------GDILVFLTGQEEIESV-ERLVQERLLQLPE 311
LY P ++ LI V+LD++P G +L+FL G I+ + + L +R
Sbjct: 837 LYMNPHKINLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFY--- 893
Query: 312 ASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKA 371
S + + + S L ++ Q F G RK++LATNIAET +TIP + +VID G K
Sbjct: 894 -SERYQVIALHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKE 952
Query: 372 RLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRC 431
Y M SL+ +SKA ALQR GRAGR G CFRLY F+ D + PEI R
Sbjct: 953 NKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLDYSVPEILRV 1012
Query: 432 NLSNVILQLKA--LGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALT-DDCKLSDPVGHQ 488
L + L + LG + ++ P I ++ L +GA ++ KL+ P+G
Sbjct: 1013 PLEELCLHIMKCDLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACEPNEPKLT-PLGQH 1071
Query: 489 MARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPG 532
+A LP++ K LI F CLE + A+++ +S F G
Sbjct: 1072 LAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIG 1115
Score = 161 (61.7 bits), Expect = 1.0e-44, Sum P(3) = 1.0e-44
Identities = 40/118 (33%), Positives = 61/118 (51%)
Query: 27 SSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH---AGF 83
S+ + Q++L++R+ LP+ +VE ++++ ++++ GETGSGK+TQ+P FL
Sbjct: 557 STPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLDE 616
Query: 84 CRDGKL-IGVTQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI 135
C K I TQP EE G E G GY IR + R S STR+
Sbjct: 617 CGARKCNIVCTQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRL 674
Score = 115 (45.5 bits), Expect = 6.2e-40, Sum P(3) = 6.2e-40
Identities = 37/99 (37%), Positives = 46/99 (46%)
Query: 93 TQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI----KEALL--- 140
TQP EE G E G GY IR + R S STR+ LL
Sbjct: 627 TQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKL 686
Query: 141 --DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
D L+ S +IVDE HER+V +D LL +LK++ RS
Sbjct: 687 QEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRS 725
Score = 88 (36.0 bits), Expect = 1.0e-44, Sum P(3) = 1.0e-44
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+K + L LI+MSA++D+ FS YF + + GR +PVE+ +
Sbjct: 722 QKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFH 764
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 337 (123.7 bits), Expect = 5.7e-44, Sum P(3) = 5.7e-44
Identities = 95/284 (33%), Positives = 140/284 (49%)
Query: 259 LYPEPDYLDATLITIFQVHLDEAP------GDILVFLTGQEEIESV-ERLVQERLLQLPE 311
LY P ++ LI V+LD++P G +L+FL G I+ + + L +R
Sbjct: 838 LYMNPHKINLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFY--- 894
Query: 312 ASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKA 371
S + + + S L ++ Q F G RK++LATNIAET +TIP + +VID G K
Sbjct: 895 -SERYQLIALHSVLSTQDQAAAFMLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKE 953
Query: 372 RLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRC 431
Y M SL+ +SKA ALQR GRAGR G CFRLY F+ + + PEI R
Sbjct: 954 NKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLEYSVPEILRV 1013
Query: 432 NLSNVILQLKA--LGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALT-DDCKLSDPVGHQ 488
L + L + LG + ++ P I ++ L +GA + KL+ P+G
Sbjct: 1014 PLEELCLHIMKCDLGSPEDFLSKALDPPQPQVISNAMNLLRKIGACEPSEPKLT-PLGQH 1072
Query: 489 MARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPG 532
+A LP++ K LI F CLE + A+++ +S F G
Sbjct: 1073 LAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIG 1116
Score = 160 (61.4 bits), Expect = 5.7e-44, Sum P(3) = 5.7e-44
Identities = 40/118 (33%), Positives = 61/118 (51%)
Query: 27 SSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH---AGF 83
S+ + Q++L++R+ LP+ +VE ++++ ++++ GETGSGK+TQ+P FL
Sbjct: 558 STPKYQRLLKERQQLPVFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLND 617
Query: 84 CRDGKL-IGVTQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI 135
C K I TQP EE G E G GY IR + R S STR+
Sbjct: 618 CGARKCNIVCTQPRRISAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASESTRL 675
Score = 113 (44.8 bits), Expect = 4.5e-39, Sum P(3) = 4.5e-39
Identities = 37/99 (37%), Positives = 46/99 (46%)
Query: 93 TQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI----KEALL--- 140
TQP EE G E G GY IR + R S STR+ LL
Sbjct: 628 TQPRRISAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKL 687
Query: 141 --DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
D L+ S +IVDE HER+V +D LL +LK++ RS
Sbjct: 688 QEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRS 726
Score = 88 (36.0 bits), Expect = 5.7e-44, Sum P(3) = 5.7e-44
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+K + L LI+MSA++D+ FS YF + + GR +PVE+ +
Sbjct: 723 QKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFH 765
>UNIPROTKB|Q3ZBE0 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0004386
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 EMBL:BC103411 IPI:IPI00704154
RefSeq:NP_001030399.1 UniGene:Bt.49583 PRIDE:Q3ZBE0
Ensembl:ENSBTAT00000033191 GeneID:517947 KEGG:bta:517947 CTD:165545
InParanoid:Q3ZBE0 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3
NextBio:20872543 Uniprot:Q3ZBE0
Length = 719
Score = 344 (126.2 bits), Expect = 6.0e-44, Sum P(2) = 6.0e-44
Identities = 96/314 (30%), Positives = 162/314 (51%)
Query: 222 LIIMSASLDARGFSEYFGCAKAVHVQGR--QFPVEILYTLYPEPDYLDATLITIFQVHLD 279
+++ SL+ + +++G V V + P + P D +DA + + +
Sbjct: 201 VVVTDPSLEPK-LQDFWGGPPTVCVPRKTGSCPTPVYRDSLPA-DRVDAACQAVLEWCQE 258
Query: 280 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 339
EAPGD+LV+L +EEI + ++ L +P+ Q V+ +
Sbjct: 259 EAPGDVLVYLPSEEEISLCCESLSRKVRSLENQGPPPRVLPLHPGCGQAVQA-VYEDTES 317
Query: 340 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGR 399
G RKV++ +A+ S ++P I++VID G +Y P ES ++ P+SK QA R R
Sbjct: 318 GARKVVVTHWLADFSFSLPSIRHVIDSGLELRSVYSPQIRAESQVLRPVSKCQAEARRLR 377
Query: 400 AGREGPGKCFRLYPENEFDKLEDS--TKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 457
A PG C LYP++ F +LE +P + NLS+++L LK + + F+++P
Sbjct: 378 AAGIPPGSCLCLYPKS-FLELEAPYLPQPRVWAENLSSLMLLLKRRQIAEPGKCHFLDRP 436
Query: 458 SRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLIT 517
+ +++++LE L L AL DD LSD +G ++ PL P +KAL+ + +F+C++EML
Sbjct: 437 APEALMQALEDLDYLAALDDDGDLSD-LGVILSEFPLAPELAKALLASCEFDCVDEMLTL 495
Query: 518 VAMLSVESIFFRSP 531
AML+ F R P
Sbjct: 496 AAMLTAAPGFTRPP 509
Score = 187 (70.9 bits), Expect = 6.0e-44, Sum P(2) = 6.0e-44
Identities = 63/193 (32%), Positives = 94/193 (48%)
Query: 6 EGEVSNSTHNPKLHSKPFFN-DSSSRRQKILQQRKSLPIASVEKRLVEEVRKND--ILII 62
E E + +L PF SSR K+L+QR+SLP+ + +E + + ++++
Sbjct: 9 EEESGPNPEESELAVNPFDGLPFSSRYYKLLEQRRSLPVWAARFIFLEHLESSPSGVVLV 68
Query: 63 VGETGSGKTTQLPQ----FLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQR 118
GE G GK+TQ+PQ F+ GF + G + VTQP +E + LG
Sbjct: 69 SGEPGCGKSTQIPQWCAEFVLARGF-QKG-WVTVTQPYPLAALSLALRVADEMDLTLGHE 126
Query: 119 VGYSIRFDDRTSTSTRIK----EALLDPYLSRYSA-----IIVDEAHERTVHTDVLLGLL 169
VGYSI +D T T ++ LL S +I+DEA ER+V +D+L GLL
Sbjct: 127 VGYSIPQEDCTGPDTLLRFCWDRLLLQEVASTRGTGARGVLILDEAQERSVASDLLQGLL 186
Query: 170 KKVQNARSKSADG 182
+ +AR S G
Sbjct: 187 R---DARLGSLPG 196
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 340 (124.7 bits), Expect = 6.9e-44, Sum P(3) = 6.9e-44
Identities = 88/263 (33%), Positives = 138/263 (52%)
Query: 275 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
++ L + G IL+FL G EI R + + L +P+ +SL +++Q +VF
Sbjct: 880 ELSLAQKSGGILIFLPGVAEIN--------RACGMLRSLNCLHVLPLHASLETKEQRKVF 931
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
P +G RKV++ATN+AETS+TI I V+D G VK YD M L S A
Sbjct: 932 VPPPSGKRKVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEETFASLAACK 991
Query: 395 QRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGF--D 452
QR GRAGR G+C++LY ++ + +PE++R L + L ++A+G+ D+ GF
Sbjct: 992 QRRGRAGRVQAGECYKLYTRKLESQMAERPEPEMRRVPLEQLCLSVRAMGIADVRGFLAR 1051
Query: 453 FMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLE 512
P A++ ++ L +G L D +L+ +G Q+A +P D K ++ F CLE
Sbjct: 1052 APTPPEAAAVEGAITMLRRMGCL-DGEELT-ALGRQLAAIPADLRCGKLMVYGAVFGCLE 1109
Query: 513 EMLITVAMLSVESIFFRSPGEVR 535
+ + A+LS F SP + R
Sbjct: 1110 DCVSVAALLSSGRGVFVSPPDKR 1132
Score = 160 (61.4 bits), Expect = 6.9e-44, Sum P(3) = 6.9e-44
Identities = 45/131 (34%), Positives = 63/131 (48%)
Query: 11 NSTHNPKLHSKPFF--NDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGS 68
N NP SK + + +K+L QR+ LP + +V V ++ + II GETGS
Sbjct: 601 NIVWNPDSASKNEWLRRQETPEYRKMLGQRQKLPAWLLRDEIVRTVAEHQVTIIAGETGS 660
Query: 69 GKTTQLPQF----LFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIR 124
GK+TQ QF L+ G ++ VTQP +E ++GQ VGY IR
Sbjct: 661 GKSTQSVQFILDDLYGRGLGHAANIL-VTQPRRISALGLADRVSDERCSQVGQEVGYIIR 719
Query: 125 FDDRTSTSTRI 135
+ RT TRI
Sbjct: 720 GESRTGPKTRI 730
Score = 84 (34.6 bits), Expect = 6.9e-44, Sum P(3) = 6.9e-44
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 158 RTVHTDVLLG-LLKKVQNARSKSADG-HSXXXXXXXXSDMILDRGNDTNGINTLKQCQGR 215
+T T V G LL+++Q + + D S D + +R DT+ + ++ + +
Sbjct: 727 KTRITFVTTGVLLRRLQVSGGRVEDVVASLADVSHVVIDEVHERSLDTDFLLSIIRDVLK 786
Query: 216 KFAPLKLIIMSASLDARGFSEYF---GCAKA-VHVQGRQFPVEILY 257
+ LKL++MSA+LD+ F+ YF G V + GR FPV Y
Sbjct: 787 QRRDLKLVLMSATLDSATFASYFVQDGIRVGQVEIAGRTFPVTDYY 832
Score = 72 (30.4 bits), Expect = 1.2e-42, Sum P(3) = 1.2e-42
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 144 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
L+ S +++DE HER++ TD LL +++ V R
Sbjct: 756 LADVSHVVIDEVHERSLDTDFLLSIIRDVLKQR 788
>UNIPROTKB|G4NI12 [details] [associations]
symbol:MGG_17793 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0043581
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 RefSeq:XP_003720239.1 EnsemblFungi:MGG_17793T0
GeneID:12987242 KEGG:mgr:MGG_17793 Uniprot:G4NI12
Length = 1430
Score = 354 (129.7 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 88/292 (30%), Positives = 155/292 (53%)
Query: 266 LDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL---------LQLPEASRKL 316
+D TI + +PGDILVFL G +EI SV ++++R + + S+
Sbjct: 855 IDLVAATIAHIASSASPGDILVFLPGIKEIRSVNDVLRDRQGSLGIDFKDINFNDTSKFR 914
Query: 317 VTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDP 376
+ + S++ + +Q ++F G R++ILA+NIAETSVTIP + +V+D G + R YD
Sbjct: 915 IHF-LHSAVSAAEQNKIFQKVPLGCRRIILASNIAETSVTIPDVVHVVDVGKTRDRKYDR 973
Query: 377 VKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNV 436
+ + +K++A+QR GRAGR G + LY E ++D PE+ + +L+N
Sbjct: 974 STRITGMYTGWQTKSKAMQRQGRAGRTQEGHYYGLYSEQRRQSMKDDALPEMLKLDLTNT 1033
Query: 437 ILQLKALGVDDIIGFDFME---KPSRASIIK-SLEQLFLLGALTDDCKLSDPVGHQMARL 492
L +K G D + DF+ P S+++ ++ L + AL ++ ++ +GH + R+
Sbjct: 1034 CLSVKGFGFRDSVA-DFLAAAISPPPPSVVQDAVNSLKAMDALAENEGITS-LGHLLLRI 1091
Query: 493 PLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRGKKCNEIF 544
PL P+ K +++ F C+ M++ A+ S+F PG K+ ++ F
Sbjct: 1092 PLHPLLGKMILLGVFFRCVGPMIVLCALHGGGSLFEVPPGSPSAAKRAHQQF 1143
Score = 182 (69.1 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 56/180 (31%), Positives = 88/180 (48%)
Query: 9 VSNSTHNPKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGS 68
++ S+ N +L ++ + + I QR SLP+ K+L+ V + I++G TGS
Sbjct: 553 LARSSLNRRLAARLEAYQADRHLEHIRAQRASLPMNKHRKQLLNLVEGSHFCIVIGATGS 612
Query: 69 GKTTQLPQFLFH----AGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIR 124
GK+TQ+PQ + G D +++ + QP E G LG+ VG+ IR
Sbjct: 613 GKSTQVPQIILDDAIKQGRGADTRILCL-QPRRAAAMWVAQRVASERGERLGESVGFRIR 671
Query: 125 FDDRTS----------TSTRIKEALLDPY---LSRYSAIIVDEAHERTVHTDVLLGLLKK 171
FD R + T + + L D L YS I++DE HER++ D+LL +LKK
Sbjct: 672 FDARLANRQGGTVSFVTLGILLKQLQDGVQETLDMYSHIVIDEVHERSLELDLLLVVLKK 731
>UNIPROTKB|Q9KUC1 [details] [associations]
symbol:VC_0601 "ATP-dependent helicase HrpB" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI ProtClustDB:PRK11664 InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 PIR:H82302 RefSeq:NP_230251.1
ProteinModelPortal:Q9KUC1 DNASU:2615389 GeneID:2615389
KEGG:vch:VC0601 PATRIC:20080310 Uniprot:Q9KUC1
Length = 820
Score = 342 (125.4 bits), Expect = 2.7e-43, Sum P(2) = 2.7e-43
Identities = 99/308 (32%), Positives = 157/308 (50%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQV--- 276
LK+++MSA+LD + A V QGR FP+EI Y +P D L+T Q
Sbjct: 150 LKIVVMSATLDQQALQNLLPQASYVESQGRGFPIEIRY----QPLRSDEPLVTAMQRQIR 205
Query: 277 HL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFA 335
HL G +L FL G S+ +L + QL + + ++ P++ + Q R A
Sbjct: 206 HLLQHETGSLLAFLPGAA---SINQLTE----QLSDLASEVEICPLYGQMEFAAQQRAIA 258
Query: 336 PAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQ 395
P AAG RKV+LATNIAETS+TI GI+ V+D G ++ +D G+ L V I+++ A Q
Sbjct: 259 PTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSARFDLKTGITRLEQVRIAQSSAEQ 318
Query: 396 RSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFME 455
R+GRAGR PG C RLY E + + +PE+ +L+ + L+L G ++
Sbjct: 319 RAGRAGRLEPGICVRLYSEAQLKQQPWVPEPEMLHTDLAPLALELAQWGAQPS-DLAWLN 377
Query: 456 KPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQF--NCLEE 513
P ++ ++ + L LG L +++ G + L ++P + L+ A + + L+
Sbjct: 378 LPPSSAFAQAQQLLQRLGLLDARTQIT-AAGKEAHLLGVEPRIAAMLLSADRLGESALQS 436
Query: 514 MLITVAML 521
L +L
Sbjct: 437 ALALTVLL 444
Score = 186 (70.5 bits), Expect = 2.7e-43, Sum P(2) = 2.7e-43
Identities = 48/144 (33%), Positives = 75/144 (52%)
Query: 41 LPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXX 100
LPI V +L+ + + LI+ G+GK+T P L AG GK+I + +P
Sbjct: 4 LPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGFH-GKII-MLEPRRLAA 61
Query: 101 XXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPYLSRYSAII 151
++ G E+GQRVGY +R ++R S +T+++ E ++ DP L +I
Sbjct: 62 RNIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLI 121
Query: 152 VDEAHERTVHTDVLLGLLKKVQNA 175
DE HER++H D L L +VQ+A
Sbjct: 122 FDEFHERSIHADTALALALEVQSA 145
>TIGR_CMR|VC_0601 [details] [associations]
symbol:VC_0601 "ATP-dependent helicase HrpB" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI ProtClustDB:PRK11664 InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 PIR:H82302 RefSeq:NP_230251.1
ProteinModelPortal:Q9KUC1 DNASU:2615389 GeneID:2615389
KEGG:vch:VC0601 PATRIC:20080310 Uniprot:Q9KUC1
Length = 820
Score = 342 (125.4 bits), Expect = 2.7e-43, Sum P(2) = 2.7e-43
Identities = 99/308 (32%), Positives = 157/308 (50%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQV--- 276
LK+++MSA+LD + A V QGR FP+EI Y +P D L+T Q
Sbjct: 150 LKIVVMSATLDQQALQNLLPQASYVESQGRGFPIEIRY----QPLRSDEPLVTAMQRQIR 205
Query: 277 HL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFA 335
HL G +L FL G S+ +L + QL + + ++ P++ + Q R A
Sbjct: 206 HLLQHETGSLLAFLPGAA---SINQLTE----QLSDLASEVEICPLYGQMEFAAQQRAIA 258
Query: 336 PAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQ 395
P AAG RKV+LATNIAETS+TI GI+ V+D G ++ +D G+ L V I+++ A Q
Sbjct: 259 PTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSARFDLKTGITRLEQVRIAQSSAEQ 318
Query: 396 RSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFME 455
R+GRAGR PG C RLY E + + +PE+ +L+ + L+L G ++
Sbjct: 319 RAGRAGRLEPGICVRLYSEAQLKQQPWVPEPEMLHTDLAPLALELAQWGAQPS-DLAWLN 377
Query: 456 KPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQF--NCLEE 513
P ++ ++ + L LG L +++ G + L ++P + L+ A + + L+
Sbjct: 378 LPPSSAFAQAQQLLQRLGLLDARTQIT-AAGKEAHLLGVEPRIAAMLLSADRLGESALQS 436
Query: 514 MLITVAML 521
L +L
Sbjct: 437 ALALTVLL 444
Score = 186 (70.5 bits), Expect = 2.7e-43, Sum P(2) = 2.7e-43
Identities = 48/144 (33%), Positives = 75/144 (52%)
Query: 41 LPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXX 100
LPI V +L+ + + LI+ G+GK+T P L AG GK+I + +P
Sbjct: 4 LPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGFH-GKII-MLEPRRLAA 61
Query: 101 XXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPYLSRYSAII 151
++ G E+GQRVGY +R ++R S +T+++ E ++ DP L +I
Sbjct: 62 RNIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLI 121
Query: 152 VDEAHERTVHTDVLLGLLKKVQNA 175
DE HER++H D L L +VQ+A
Sbjct: 122 FDEFHERSIHADTALALALEVQSA 145
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 350 (128.3 bits), Expect = 2.7e-43, Sum P(3) = 2.7e-43
Identities = 88/250 (35%), Positives = 137/250 (54%)
Query: 283 GDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFR 342
G IL+FL G EI S + + + + K + +P+ S L S +Q +F A G R
Sbjct: 821 GSILIFLPGVLEISSTIKEINK------SSDNKFMALPLHSGLTSAEQKSIFKTAPKGKR 874
Query: 343 KVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGR 402
KV+++TNIAETS+TIP VID G K +D L+ S+A+ QR GRAGR
Sbjct: 875 KVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQRRGRAGR 934
Query: 403 EGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGF--DFMEKPSRA 460
G C+ LY + F+ ++ PEIKR L N+ L +K++G+ ++ F ++ P ++
Sbjct: 935 VTAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLYLVVKSMGISNVNEFLSSGLDAPDKS 994
Query: 461 SIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAM 520
S+ K+ + L +GAL ++ L+ +G+ ++ LP DP +K LI+ F CL+ L A+
Sbjct: 995 SLDKANQFLHEIGALQEN-SLTK-LGNYISYLPTDPQSAKLLILGCIFGCLDICLTLAAI 1052
Query: 521 LSVESIFFRS 530
S S F S
Sbjct: 1053 SSTGSPFINS 1062
Score = 188 (71.2 bits), Expect = 2.7e-43, Sum P(3) = 2.7e-43
Identities = 55/166 (33%), Positives = 84/166 (50%)
Query: 28 SSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDG 87
S +++L QR LP + ++ L+ + + +I GETGSGK+TQ+ QF+ + +
Sbjct: 560 SDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIMDDLYSKGD 619
Query: 88 ---KLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKEA----LL 140
K+I TQP +E E+G GY IR +++TS++TRI A LL
Sbjct: 620 FTTKII-CTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSNTRITFATTGVLL 678
Query: 141 --------DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 178
+ L I++DE HER+V D LL LLKK+ + K
Sbjct: 679 RMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPK 724
Score = 74 (31.1 bits), Expect = 1.9e-31, Sum P(3) = 1.9e-31
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 194 DMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKA-VHVQGRQFP 252
D + +R D + + L + + LK+I++SA++ F +F +H++GR +P
Sbjct: 699 DEVHERSVDADFLLILLKKMIKSMPKLKIILLSATISVDTFINFFEKPLTPLHIEGRTYP 758
Query: 253 VEILY--TLYPEPDY 265
++ Y ++ E +Y
Sbjct: 759 IQDFYLDSILAESEY 773
Score = 37 (18.1 bits), Expect = 2.7e-43, Sum P(3) = 2.7e-43
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 21 KPFFNDSSSRRQKILQQRKSL 41
+ ++N+ R K+L++ K L
Sbjct: 152 RDYWNELEDERLKLLKENKEL 172
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 350 (128.3 bits), Expect = 2.7e-43, Sum P(3) = 2.7e-43
Identities = 88/250 (35%), Positives = 137/250 (54%)
Query: 283 GDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFR 342
G IL+FL G EI S + + + + K + +P+ S L S +Q +F A G R
Sbjct: 821 GSILIFLPGVLEISSTIKEINK------SSDNKFMALPLHSGLTSAEQKSIFKTAPKGKR 874
Query: 343 KVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGR 402
KV+++TNIAETS+TIP VID G K +D L+ S+A+ QR GRAGR
Sbjct: 875 KVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQRRGRAGR 934
Query: 403 EGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGF--DFMEKPSRA 460
G C+ LY + F+ ++ PEIKR L N+ L +K++G+ ++ F ++ P ++
Sbjct: 935 VTAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLYLVVKSMGISNVNEFLSSGLDAPDKS 994
Query: 461 SIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAM 520
S+ K+ + L +GAL ++ L+ +G+ ++ LP DP +K LI+ F CL+ L A+
Sbjct: 995 SLDKANQFLHEIGALQEN-SLTK-LGNYISYLPTDPQSAKLLILGCIFGCLDICLTLAAI 1052
Query: 521 LSVESIFFRS 530
S S F S
Sbjct: 1053 SSTGSPFINS 1062
Score = 188 (71.2 bits), Expect = 2.7e-43, Sum P(3) = 2.7e-43
Identities = 55/166 (33%), Positives = 84/166 (50%)
Query: 28 SSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDG 87
S +++L QR LP + ++ L+ + + +I GETGSGK+TQ+ QF+ + +
Sbjct: 560 SDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIMDDLYSKGD 619
Query: 88 ---KLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKEA----LL 140
K+I TQP +E E+G GY IR +++TS++TRI A LL
Sbjct: 620 FTTKII-CTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSNTRITFATTGVLL 678
Query: 141 --------DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 178
+ L I++DE HER+V D LL LLKK+ + K
Sbjct: 679 RMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPK 724
Score = 74 (31.1 bits), Expect = 1.9e-31, Sum P(3) = 1.9e-31
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 194 DMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKA-VHVQGRQFP 252
D + +R D + + L + + LK+I++SA++ F +F +H++GR +P
Sbjct: 699 DEVHERSVDADFLLILLKKMIKSMPKLKIILLSATISVDTFINFFEKPLTPLHIEGRTYP 758
Query: 253 VEILY--TLYPEPDY 265
++ Y ++ E +Y
Sbjct: 759 IQDFYLDSILAESEY 773
Score = 37 (18.1 bits), Expect = 2.7e-43, Sum P(3) = 2.7e-43
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 21 KPFFNDSSSRRQKILQQRKSL 41
+ ++N+ R K+L++ K L
Sbjct: 152 RDYWNELEDERLKLLKENKEL 172
>UNIPROTKB|H7C109 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018693 InterPro:IPR011709 Pfam:PF07717
HGNC:HGNC:20086 ChiTaRS:DHX57 Ensembl:ENST00000452978
Uniprot:H7C109
Length = 665
Score = 398 (145.2 bits), Expect = 3.1e-43, Sum P(2) = 3.1e-43
Identities = 103/256 (40%), Positives = 142/256 (55%)
Query: 282 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGF 341
PG ILVFL G EI+ + +Q L S + V P+ SSL SE+Q VF AG
Sbjct: 171 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGV 230
Query: 342 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 401
K+I++TNIAETS+TI + YVID G +K + YD KGMESL +S+A ALQR GRAG
Sbjct: 231 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAG 290
Query: 402 REGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFD-----FME 455
R G CF L+ + ++ +L PEI+R L + L++K L + +E
Sbjct: 291 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIE 350
Query: 456 KPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEML 515
P S+ S +L LGALT D +L+ P+G+ +A LP+D K ++ F CL+ L
Sbjct: 351 PPHTDSLRASKIRLRDLGALTPDERLT-PLGYHLASLPVDVRIGKLMLFGSIFRCLDPAL 409
Query: 516 ITVAMLSVESIFFRSP 531
A L+ +S F SP
Sbjct: 410 TIAASLAFKSPFV-SP 424
Score = 86 (35.3 bits), Expect = 3.1e-43, Sum P(2) = 3.1e-43
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 254
L++I+MSA+L+A FS+YF + + GR FPV+
Sbjct: 18 LQVILMSATLNAELFSDYFNSCPVITIPGRTFPVD 52
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 335 (123.0 bits), Expect = 4.3e-43, Sum P(3) = 4.3e-43
Identities = 93/281 (33%), Positives = 140/281 (49%)
Query: 259 LYPEPDYLDATLITIFQVHLDEAP------GDILVFLTGQEEIESV-ERLVQERLLQLPE 311
LY P ++ LI +LD++P G +L+FL G I+ + + L +R
Sbjct: 838 LYMNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFY--- 894
Query: 312 ASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKA 371
S + + + S L ++ Q F G RK++LATNIAET +TIP + +VID G K
Sbjct: 895 -SERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKE 953
Query: 372 RLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRC 431
Y M SL+ +SKA ALQR GRAGR G CFR+Y F+ D + PEI R
Sbjct: 954 NKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRV 1013
Query: 432 NLSNVILQLKALGVDDIIGFDFMEK---PSRASIIKSLEQLFL-LGALT-DDCKLSDPVG 486
L + L + + DF+ K P + +I + L +GA ++ KL+ P+G
Sbjct: 1014 PLEELCLHIMKCNLGS--PEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLT-PLG 1070
Query: 487 HQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 527
+A LP++ K LI F CL+ + A+++ +S F
Sbjct: 1071 QHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPF 1111
Score = 152 (58.6 bits), Expect = 4.3e-43, Sum P(3) = 4.3e-43
Identities = 37/118 (31%), Positives = 60/118 (50%)
Query: 27 SSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRD 86
S+ + QK+L++R+ LP+ +VE ++++ ++++ GETGSGK+TQ+P FL +
Sbjct: 558 STPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNE 617
Query: 87 GKL----IGVTQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI 135
+ I TQP +E G E G GY IR + R STR+
Sbjct: 618 WEASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRL 675
Score = 109 (43.4 bits), Expect = 1.3e-38, Sum P(3) = 1.3e-38
Identities = 36/99 (36%), Positives = 45/99 (45%)
Query: 93 TQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI----KEALL--- 140
TQP +E G E G GY IR + R STR+ LL
Sbjct: 628 TQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCTTGVLLRKL 687
Query: 141 --DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
D LS S +IVDE HER+V +D LL +LK++ RS
Sbjct: 688 QEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRS 726
Score = 90 (36.7 bits), Expect = 4.3e-43, Sum P(3) = 4.3e-43
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+K + L LI+MSA++D+ FS YF + + GR +PVE+ +
Sbjct: 723 QKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 765
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 332 (121.9 bits), Expect = 5.0e-43, Sum P(3) = 5.0e-43
Identities = 93/284 (32%), Positives = 140/284 (49%)
Query: 259 LYPEPDYLDATLITIFQVHLDEAP------GDILVFLTGQEEIESVERLVQ-ERLLQLPE 311
LY P ++ LI ++LD +P G +L+FL G I+ + L+ +R
Sbjct: 835 LYMNPHKINLDLILELLIYLDRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSTDRRF---- 890
Query: 312 ASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKA 371
S + + + S L ++ Q F G RK++LATNIAET +TIP + +VID G K
Sbjct: 891 FSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKE 950
Query: 372 RLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRC 431
Y M SL+ +SKA ALQR GRAGR G CFR+Y F+ D + PEI R
Sbjct: 951 NKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRV 1010
Query: 432 NLSNVILQLKALGVDDIIGFDFMEK---PSRASIIKSLEQLFL-LGALTDDCKLSDP--- 484
L + L + + DF+ K P + +I + L +GA C+L++P
Sbjct: 1011 PLEELCLHIMKCNLGS--PEDFLSKALDPPQLQVISNAMNLLRKIGA----CELNEPTLT 1064
Query: 485 -VGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 527
+G +A LP++ K LI F CL+ + A+++ +S F
Sbjct: 1065 PLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPF 1108
Score = 155 (59.6 bits), Expect = 5.0e-43, Sum P(3) = 5.0e-43
Identities = 38/118 (32%), Positives = 61/118 (51%)
Query: 27 SSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRD 86
S+ + Q++L++R+ LP+ +VE ++++ ++++ GETGSGK+TQ+P FL +
Sbjct: 555 STPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNE 614
Query: 87 ---GKL-IGVTQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI 135
K I TQP +E G E G GY IR + R S STR+
Sbjct: 615 WGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRL 672
Score = 112 (44.5 bits), Expect = 1.5e-38, Sum P(3) = 1.5e-38
Identities = 36/99 (36%), Positives = 46/99 (46%)
Query: 93 TQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI----KEALL--- 140
TQP +E G E G GY IR + R S STR+ LL
Sbjct: 625 TQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKL 684
Query: 141 --DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
D L+ S +IVDE HER+V +D LL +LK++ RS
Sbjct: 685 QEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRS 723
Score = 90 (36.7 bits), Expect = 5.0e-43, Sum P(3) = 5.0e-43
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+K + L LI+MSA++D+ FS YF + + GR +PVE+ +
Sbjct: 720 QKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 762
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 333 (122.3 bits), Expect = 6.1e-43, Sum P(3) = 6.1e-43
Identities = 94/286 (32%), Positives = 140/286 (48%)
Query: 259 LYPEPDYLDATLITIFQVHLDEAP------GDILVFLTGQEEIESVERLVQ-ERLLQLPE 311
LY P ++ LI +LD +P G +L+FL G I+ + L+ +R
Sbjct: 835 LYMNPHKINLDLILELLTYLDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRF---- 890
Query: 312 ASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKA 371
S + + + S L ++ Q F G RK++LATNIAET +TIP + +VID G K
Sbjct: 891 FSERYKVIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKE 950
Query: 372 RLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRC 431
Y M SL+ +SKA ALQR GRAGR G CFR+Y F+ D + PEI R
Sbjct: 951 NKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRV 1010
Query: 432 NLSNVILQLKALGVDDIIGFDFMEK---PSRASIIKSLEQLFL-LGALT-DDCKLSDPVG 486
L + L + + DF+ K P + +I + L +GA ++ KL+ P+G
Sbjct: 1011 PLEELCLHIMKCNLGS--PEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLT-PLG 1067
Query: 487 HQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPG 532
+A LP++ K LI F CL+ + A+++ +S F G
Sbjct: 1068 QHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFITPIG 1113
Score = 154 (59.3 bits), Expect = 6.1e-43, Sum P(3) = 6.1e-43
Identities = 38/118 (32%), Positives = 61/118 (51%)
Query: 27 SSSRRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRD 86
S+ + Q++L++R+ LP+ +VE ++++ ++++ GETGSGK+TQ+P FL +
Sbjct: 555 STPKYQRLLKERQQLPVFKHRSSVVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNE 614
Query: 87 -GKL---IGVTQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI 135
G I TQP +E G E G GY IR + R S STR+
Sbjct: 615 WGTTKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRL 672
Score = 112 (44.5 bits), Expect = 1.4e-38, Sum P(3) = 1.4e-38
Identities = 36/99 (36%), Positives = 46/99 (46%)
Query: 93 TQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI----KEALL--- 140
TQP +E G E G GY IR + R S STR+ LL
Sbjct: 625 TQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLLRKL 684
Query: 141 --DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 177
D L+ S +IVDE HER+V +D LL +LK++ RS
Sbjct: 685 QEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRS 723
Score = 89 (36.4 bits), Expect = 6.1e-43, Sum P(3) = 6.1e-43
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 215 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 257
+K + L LI+MSA++D FS YF + + GR +PVE+ +
Sbjct: 720 QKRSDLHLILMSATVDCEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 38 (18.4 bits), Expect = 1.2e-37, Sum P(3) = 1.2e-37
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 145 SRYSAIIVDEAHERTVHTDVLLGLLKKVQ 173
S Y ++E E T++ G +KK Q
Sbjct: 778 SEYCQKFLEEEEEITINVTTKAGGIKKYQ 806
>UNIPROTKB|P37024 [details] [associations]
symbol:hrpB "predicted ATP-dependent helicase"
species:83333 "Escherichia coli K-12" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 GO:GO:0008026
EMBL:D42122 PIR:D64738 RefSeq:NP_414690.4 RefSeq:YP_488451.1
ProteinModelPortal:P37024 SMR:P37024 DIP:DIP-9938N IntAct:P37024
MINT:MINT-1231977 PRIDE:P37024 EnsemblBacteria:EBESCT00000000663
EnsemblBacteria:EBESCT00000016535 GeneID:12932407 GeneID:944845
KEGG:ecj:Y75_p0145 KEGG:eco:b0148 PATRIC:32115403 EchoBASE:EB2233
EcoGene:EG12329 HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI
ProtClustDB:PRK11664 BioCyc:EcoCyc:EG12329-MONOMER
BioCyc:ECOL316407:JW0144-MONOMER Genevestigator:P37024
InterPro:IPR010225 InterPro:IPR013689 Pfam:PF08482
PIRSF:PIRSF005496 TIGRFAMs:TIGR01970 Uniprot:P37024
Length = 809
Score = 367 (134.2 bits), Expect = 6.2e-43, Sum P(2) = 6.2e-43
Identities = 94/286 (32%), Positives = 149/286 (52%)
Query: 220 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 279
LKL+IMSA+LD + A V +GR FPVE Y P D + L
Sbjct: 150 LKLLIMSATLDNDRLQQMLPEAPVVISEGRSFPVERRYLPLPAHQRFDDAVAVATAEMLR 209
Query: 280 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 339
+ G +L+FL G EI+ V+ + R+ ++ P++ +L Q + PA
Sbjct: 210 QESGSLLLFLPGVGEIQRVQEQLASRI------GSDVLLCPLYGALSLNDQRKAILPAPQ 263
Query: 340 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGR 399
G RKV+LATNIAETS+TI GI+ V+D + +DP G+ L+ +S+A QR+GR
Sbjct: 264 GMRKVVLATNIAETSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGR 323
Query: 400 AGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSR 459
AGR PG L + + ++ ++PEI + +LS ++++L G D ++++P
Sbjct: 324 AGRLEPGISLHLIAKEQAERAAAQSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPV 383
Query: 460 ASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVA 505
+++ + L +LGAL + +LS G +MA L DP + L+ A
Sbjct: 384 VNLLAAKRLLQMLGALEGE-RLSAQ-GQKMAALGNDPRLAAMLVSA 427
Score = 151 (58.2 bits), Expect = 6.2e-43, Sum P(2) = 6.2e-43
Identities = 47/144 (32%), Positives = 72/144 (50%)
Query: 40 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLP-QFLFHAGFCRDGKLIGVTQPXXX 98
SLP+A+V L+ + +++ TG+GK+T LP Q L H G +GK+I + +P
Sbjct: 3 SLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAHPGI--NGKII-LLEPRRL 59
Query: 99 XXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPYLSRYSA 149
E + G VGY +R + +TR++ E +L DP LS
Sbjct: 60 AARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVGL 119
Query: 150 IIVDEAHERTVHTDVLLGLLKKVQ 173
+I+DE HER++ D+ L LL VQ
Sbjct: 120 VILDEFHERSLQADLALALLLDVQ 143
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 326 (119.8 bits), Expect = 7.4e-43, Sum P(2) = 7.4e-43
Identities = 85/226 (37%), Positives = 123/226 (54%)
Query: 282 PGDILVFLTGQEEIESVERLVQERLLQLPE-ASRKLVTVPIFSSLPSEQQMRVFAPAAAG 340
PG +LVFL G I ++ Q+ L P + + +P+ S +P E+Q +VF P AG
Sbjct: 642 PGAVLVFLPGWNLIYTM----QKHLEMNPHFGNHRYQILPLHSQIPREEQRKVFDPVPAG 697
Query: 341 FRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRA 400
KVIL+TNIAETS+TI + YVID K +L+ M + V SK QR GRA
Sbjct: 698 VTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRA 757
Query: 401 GREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGF--DFMEKPS 458
GR PG CF L FD+LE PE+ R L + L +K L + I F +E P
Sbjct: 758 GRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPP 817
Query: 459 RASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIV 504
++I++ L L AL + +L+ P+G +A+LP++P + K +I+
Sbjct: 818 LDAVIEAEHTLRELDALDANDELT-PLGRILAKLPIEPRFGKMMIM 862
Score = 207 (77.9 bits), Expect = 7.4e-43, Sum P(2) = 7.4e-43
Identities = 56/156 (35%), Positives = 82/156 (52%)
Query: 32 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL-- 89
Q ILQ+R+ LP+ E ++E + +N ++I+ G TG GKTTQ+PQF+ F ++ +
Sbjct: 375 QAILQERELLPVKKFESEILEAISQNPVVIVRGATGCGKTTQVPQFILD-DFIQNDRAAE 433
Query: 90 --IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD---RTSTSTR---IKEAL-- 139
I VTQP E G E G+ GYS+RF+ R S + L
Sbjct: 434 CNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK 493
Query: 140 LDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNA 175
L+ + S +IVDE HER ++TD LL +L+ V A
Sbjct: 494 LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQA 529
Score = 79 (32.9 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 194 DMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 253
D I +R +T+ + + + + + +++++MSA++D F EYF + V GR +PV
Sbjct: 507 DEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPV 566
Query: 254 E 254
+
Sbjct: 567 Q 567
>MGI|MGI:2136388 [details] [associations]
symbol:Dqx1 "DEAQ RNA-dependent ATPase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=ISA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 MGI:MGI:2136388 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 GO:GO:0016887 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AF318278 EMBL:BC048936 EMBL:BC075680
IPI:IPI00125675 IPI:IPI00844713 RefSeq:NP_291084.1
UniGene:Mm.140332 ProteinModelPortal:Q924H9 SMR:Q924H9
PhosphoSite:Q924H9 PRIDE:Q924H9 Ensembl:ENSMUST00000077502
GeneID:93838 KEGG:mmu:93838 UCSC:uc009cmc.1 UCSC:uc009cmd.1
InParanoid:Q924H9 NextBio:351693 Bgee:Q924H9 CleanEx:MM_DQX1
Genevestigator:Q924H9 Uniprot:Q924H9
Length = 718
Score = 339 (124.4 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 100/319 (31%), Positives = 165/319 (51%)
Query: 219 PLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEIL-YTLYPEPDYLDATLITIFQV- 276
P +++ +L+ + F ++G + V V L Y D ++A + ++
Sbjct: 195 PRVVVVTDPALEPK-FQAFWGNSPIVRVPREPGGDPTLAYKDTVPTDLVEAACQAVLELC 253
Query: 277 HLDEAPGDILVFLTGQEEIE-SVERLVQER-LLQLPEASRKLVTVPIFSSLPSEQQMRVF 334
+EAPGD+LV+L +EEI E L E L +P +++ P+ Q V+
Sbjct: 254 QQEEAPGDVLVYLPSEEEISLCCESLSGEMGTLAVPGPPPRVL--PLHPGCAQAIQT-VY 310
Query: 335 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 394
RK+++ +A+ S ++P I++VID G +Y+P ES ++ PISK QA
Sbjct: 311 EDTDVSVRKIVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAE 370
Query: 395 QRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRC--NLSNVILQLKALGVDDIIGFD 452
R RA PG C RLY ++ + LE P K C NLS+++L L + +
Sbjct: 371 ARLLRAKGFPPGSCLRLYSKSTLE-LEAPPLPHPKVCEENLSSLVLLLMRKQIAEPGECH 429
Query: 453 FMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLE 512
F+++P+ +++++LE L L AL DD +LSD +G ++ PL P +KAL+ + +FNC++
Sbjct: 430 FLDRPAPEALMRALEDLDYLAALNDDGELSD-LGVILSEFPLPPELAKALLASCEFNCVD 488
Query: 513 EMLITVAMLSVESIFFRSP 531
EML AML+ F R P
Sbjct: 489 EMLTLAAMLTAAPGFTRPP 507
Score = 181 (68.8 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 58/182 (31%), Positives = 93/182 (51%)
Query: 4 VAEGEVSNSTHNPKLHSKPFFNDSSSRRQKILQQRKSLPIASVEKRLVEEVRKND--ILI 61
++ GE S NP PF SS ++L+QR++LPI + +E + + +++
Sbjct: 11 LSPGE-SELAVNP-FDGLPF----SSCYYELLEQRRALPIWAARFLFLEHLESSPTGVVL 64
Query: 62 IVGETGSGKTTQLPQ----FLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQ 117
+ G+ GSGK+TQ+PQ F GF + G+ + VTQP +E + LG
Sbjct: 65 VSGDPGSGKSTQIPQWCAEFALARGF-QTGQ-VTVTQPYPLAAMSLASRVADEMDLTLGH 122
Query: 118 RVGYSIRFDDRTSTSTRIK----EALLDPYLSR-----YSAIIVDEAHERTVHTDVLLGL 168
+GYSI +D T +T ++ L S +S +I+DEA ER+V +D+L GL
Sbjct: 123 EIGYSIPQEDCTGPNTMLRFCWDRLFLQEVASTRGPGAWSVLILDEAQERSVASDLLQGL 182
Query: 169 LK 170
L+
Sbjct: 183 LR 184
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 327 (120.2 bits), Expect = 1.2e-42, Sum P(2) = 1.2e-42
Identities = 85/226 (37%), Positives = 124/226 (54%)
Query: 282 PGDILVFLTGQEEIESVERLVQERLLQLPE-ASRKLVTVPIFSSLPSEQQMRVFAPAAAG 340
PG +LVFL G I ++ Q+ L P+ S + +P+ S +P E+Q +VF P AG
Sbjct: 651 PGAVLVFLPGWNLIYTM----QKHLEMNPDFGSHRYQILPLHSQIPREEQRKVFDPVPAG 706
Query: 341 FRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRA 400
KVIL+TNIAETS+TI + YVID K +L+ M + V SK QR GRA
Sbjct: 707 VTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRA 766
Query: 401 GREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGF--DFMEKPS 458
GR PG CF L F++LE PE+ R L + L +K L + I F +E P
Sbjct: 767 GRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPP 826
Query: 459 RASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIV 504
++I++ L L AL + +L+ P+G +A+LP++P + K +I+
Sbjct: 827 LDAVIEAEHTLRELDALDANDELT-PLGRILAKLPIEPRFGKMMIM 871
Score = 204 (76.9 bits), Expect = 1.2e-42, Sum P(2) = 1.2e-42
Identities = 56/154 (36%), Positives = 81/154 (52%)
Query: 34 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL---- 89
ILQ+R+ LP+ E ++E + +N ++II G TG GKTTQ+PQF+ F ++ +
Sbjct: 382 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILD-DFIQNDRAAECN 440
Query: 90 IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD---RTSTSTR---IKEAL--LD 141
I VTQP E G E G+ GYS+RF+ R S + L L+
Sbjct: 441 IVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESVLPRPYASIMFCTVGVLLRKLE 500
Query: 142 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNA 175
+ S +IVDE HER ++TD LL +L+ V A
Sbjct: 501 AGIRGISHVIVDEIHERDINTDFLLVVLRDVVQA 534
Score = 79 (32.9 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 194 DMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 253
D I +R +T+ + + + + + +++++MSA++D F EYF + V GR +PV
Sbjct: 512 DEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPV 571
Query: 254 E 254
+
Sbjct: 572 Q 572
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 323 (118.8 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 87/241 (36%), Positives = 129/241 (53%)
Query: 282 PGDILVFLTGQEEIESVERLVQERLLQLPE-ASRKLVTVPIFSSLPSEQQMRVFAPAAAG 340
PG +LVFL G I ++ Q+ L P S + +P+ S +P E+Q +VF P G
Sbjct: 650 PGAVLVFLPGWNLIYTM----QKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVG 705
Query: 341 FRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRA 400
KVIL+TNIAETS+TI + YVID K +L+ M + V SK QR GRA
Sbjct: 706 VTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRA 765
Query: 401 GREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGF--DFMEKPS 458
GR PG CF L F++LE PE+ R L + L +K L + I F +E P
Sbjct: 766 GRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPP 825
Query: 459 RASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITV 518
++I++ L L AL + +L+ P+G +A+LP++P + K +I+ F + + + T+
Sbjct: 826 LDAVIEAEHTLRELDALDANDELT-PLGRILAKLPIEPRFGKMMIMGCIFY-VGDAICTI 883
Query: 519 A 519
A
Sbjct: 884 A 884
Score = 208 (78.3 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 57/156 (36%), Positives = 82/156 (52%)
Query: 32 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL-- 89
Q ILQ+R+ LP+ E ++E + +N ++II G TG GKTTQ+PQF+ F ++ +
Sbjct: 379 QAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILD-DFIQNDRAAE 437
Query: 90 --IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD---RTSTSTR---IKEAL-- 139
I VTQP E G E G+ GYS+RF+ R S + L
Sbjct: 438 CNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK 497
Query: 140 LDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNA 175
L+ + S +IVDE HER ++TD LL +L+ V A
Sbjct: 498 LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQA 533
Score = 79 (32.9 bits), Expect = 4.4e-29, Sum P(2) = 4.4e-29
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 194 DMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 253
D I +R +T+ + + + + + +++++MSA++D F EYF + V GR +PV
Sbjct: 511 DEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPV 570
Query: 254 E 254
+
Sbjct: 571 Q 571
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 323 (118.8 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 87/241 (36%), Positives = 129/241 (53%)
Query: 282 PGDILVFLTGQEEIESVERLVQERLLQLPE-ASRKLVTVPIFSSLPSEQQMRVFAPAAAG 340
PG +LVFL G I ++ Q+ L P S + +P+ S +P E+Q +VF P G
Sbjct: 650 PGAVLVFLPGWNLIYTM----QKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVG 705
Query: 341 FRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRA 400
KVIL+TNIAETS+TI + YVID K +L+ M + V SK QR GRA
Sbjct: 706 VTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRA 765
Query: 401 GREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGF--DFMEKPS 458
GR PG CF L F++LE PE+ R L + L +K L + I F +E P
Sbjct: 766 GRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPP 825
Query: 459 RASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITV 518
++I++ L L AL + +L+ P+G +A+LP++P + K +I+ F + + + T+
Sbjct: 826 LDAVIEAEHTLRELDALDANDELT-PLGRILAKLPIEPRFGKMMIMGCIFY-VGDAICTI 883
Query: 519 A 519
A
Sbjct: 884 A 884
Score = 208 (78.3 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 57/156 (36%), Positives = 82/156 (52%)
Query: 32 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL-- 89
Q ILQ+R+ LP+ E ++E + +N ++II G TG GKTTQ+PQF+ F ++ +
Sbjct: 379 QAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILD-DFIQNDRAAE 437
Query: 90 --IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD---RTSTSTR---IKEAL-- 139
I VTQP E G E G+ GYS+RF+ R S + L
Sbjct: 438 CNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK 497
Query: 140 LDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNA 175
L+ + S +IVDE HER ++TD LL +L+ V A
Sbjct: 498 LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQA 533
Score = 79 (32.9 bits), Expect = 4.4e-29, Sum P(2) = 4.4e-29
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 194 DMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 253
D I +R +T+ + + + + + +++++MSA++D F EYF + V GR +PV
Sbjct: 511 DEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPV 570
Query: 254 E 254
+
Sbjct: 571 Q 571
>UNIPROTKB|Q5THQ9 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL023803
UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI01009669 SMR:Q5THQ9
Ensembl:ENST00000441485 HOGENOM:HOG000202213 HOVERGEN:HBG079487
Uniprot:Q5THQ9
Length = 302
Score = 244 (91.0 bits), Expect = 1.7e-42, Sum P(2) = 1.7e-42
Identities = 59/151 (39%), Positives = 87/151 (57%)
Query: 206 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 254
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 154 IGLLKKIQ-KKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCV-ILTVEGRTFPVD 211
Query: 255 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 312
I Y P PDY+ +T+ T+ ++H E GD+L FLTGQEE+E+V ++ Q R L
Sbjct: 212 IFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGM 271
Query: 313 SRKLVTVPIFSSLPSEQQMRVFAPAAAGFRK 343
R L +P+++ LPS +QM+VF + RK
Sbjct: 272 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRK 302
Score = 237 (88.5 bits), Expect = 1.7e-42, Sum P(2) = 1.7e-42
Identities = 53/116 (45%), Positives = 71/116 (61%)
Query: 73 QLPQF--LFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTS 130
+LP F L AG+ +G+++GVTQP EE G LG VGY IRFDD T
Sbjct: 49 KLPVFKYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTD 108
Query: 131 T-STRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 176
+TRIK E ++DP L++YS I++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 109 QLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKR 164
WARNING: HSPs involving 63 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 555 534 0.00093 119 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 313
No. of states in DFA: 609 (65 KB)
Total size of DFA: 266 KB (2141 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.02u 0.11s 42.13t Elapsed: 00:00:02
Total cpu time: 42.09u 0.11s 42.20t Elapsed: 00:00:02
Start: Fri May 10 18:08:56 2013 End: Fri May 10 18:08:58 2013
WARNINGS ISSUED: 2