Query 008736
Match_columns 555
No_of_seqs 433 out of 2794
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 10:32:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008736.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008736hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3n_A Kelch-like protein 11; 100.0 3.3E-45 1.1E-49 370.1 10.3 250 124-385 12-272 (279)
2 3hve_A Gigaxonin; ubiquitin, c 100.0 5.4E-44 1.8E-48 356.6 6.3 238 124-374 11-255 (256)
3 3hqi_A Speckle-type POZ protei 99.9 2E-28 6.9E-33 250.9 5.4 200 64-288 105-311 (312)
4 3htm_A Speckle-type POZ protei 99.9 1.7E-27 5.9E-32 222.4 9.5 149 131-288 21-171 (172)
5 4eoz_A Speckle-type POZ protei 99.9 5.8E-25 2E-29 199.4 2.6 132 131-270 12-145 (145)
6 2if5_A Zinc finger and BTB dom 99.9 8.7E-23 3E-27 179.3 6.4 111 127-240 8-120 (120)
7 2z8h_A Transcription regulator 99.9 1E-22 3.4E-27 183.6 5.8 121 124-249 16-138 (138)
8 1r29_A B-cell lymphoma 6 prote 99.9 2.1E-22 7.1E-27 178.7 7.1 112 126-241 11-125 (127)
9 2vkp_A BTB/POZ domain-containi 99.9 7.4E-22 2.5E-26 170.2 9.8 100 138-241 2-107 (109)
10 2ppi_A Gigaxonin; BTB domain, 99.9 2.6E-22 8.9E-27 182.2 6.5 115 123-240 26-144 (144)
11 3b84_A Zinc finger and BTB dom 99.8 2E-22 6.7E-27 176.9 3.3 108 127-241 7-116 (119)
12 2yy9_A Zinc finger and BTB dom 99.8 2.8E-22 9.6E-27 180.0 3.4 113 127-247 8-122 (135)
13 2vpk_A Myoneurin; transcriptio 99.8 6.5E-22 2.2E-26 172.7 5.1 110 127-241 5-116 (116)
14 1buo_A POZ domain, protein (pr 99.8 2E-21 7E-26 170.9 6.0 107 127-241 11-119 (121)
15 3ohu_A Transcription regulator 99.8 3.1E-22 1.1E-26 177.1 -0.1 111 124-239 12-125 (125)
16 2ihc_A Transcription regulator 99.8 4.7E-22 1.6E-26 175.8 -0.3 110 127-240 12-123 (124)
17 2q81_A MIZ-1 protein; BTB/POZ 99.8 7.9E-22 2.7E-26 173.1 0.7 107 126-240 9-117 (119)
18 3ga1_A Nucleus accumbens-assoc 99.8 3.8E-21 1.3E-25 171.1 1.4 110 126-241 15-126 (129)
19 3m5b_A Zinc finger and BTB dom 99.8 1.7E-20 6E-25 164.5 5.2 101 127-241 15-117 (119)
20 3fkc_A Transcriptional regulat 99.8 2.1E-19 7E-24 156.9 5.0 101 125-233 12-115 (116)
21 2eqx_A Kelch repeat and BTB do 99.7 2.3E-18 8E-23 147.5 4.4 95 240-347 5-99 (105)
22 2ast_A S-phase kinase-associat 99.4 5.5E-13 1.9E-17 122.6 9.8 109 147-259 3-144 (159)
23 4ajy_C Transcription elongatio 99.1 7.8E-11 2.7E-15 98.9 7.5 78 147-228 4-97 (97)
24 2vpj_A Kelch-like protein 12; 99.0 6.2E-10 2.1E-14 111.6 11.1 88 427-520 82-206 (301)
25 3ii7_A Kelch-like protein 7; p 99.0 5.8E-10 2E-14 112.3 10.7 90 427-522 74-202 (306)
26 2xn4_A Kelch-like protein 2; s 99.0 7.5E-10 2.6E-14 111.2 10.7 90 427-522 177-301 (302)
27 1fs1_B SKP1, cyclin A/CDK2-ass 99.0 8.3E-10 2.8E-14 99.1 6.9 98 147-253 4-130 (141)
28 1zgk_A Kelch-like ECH-associat 98.9 2.1E-09 7.3E-14 108.4 10.7 87 427-519 188-308 (308)
29 1zgk_A Kelch-like ECH-associat 98.9 2.4E-09 8.3E-14 108.0 10.9 90 427-522 141-264 (308)
30 4asc_A Kelch repeat and BTB do 98.9 2.2E-09 7.5E-14 108.6 10.5 89 427-521 121-244 (315)
31 3ii7_A Kelch-like protein 7; p 98.9 2.3E-09 7.8E-14 107.8 9.9 90 427-522 122-249 (306)
32 4asc_A Kelch repeat and BTB do 98.9 3.2E-09 1.1E-13 107.4 10.6 94 423-522 67-198 (315)
33 2p1m_A SKP1-like protein 1A; F 98.9 4.5E-10 1.5E-14 103.1 3.4 100 152-259 14-143 (160)
34 2xn4_A Kelch-like protein 2; s 98.9 3.6E-09 1.2E-13 106.2 10.3 107 404-521 16-156 (302)
35 2vpj_A Kelch-like protein 12; 98.9 3.1E-09 1.1E-13 106.5 9.5 87 428-520 180-300 (301)
36 2woz_A Kelch repeat and BTB do 98.9 4.6E-09 1.6E-13 106.4 10.5 93 423-521 78-207 (318)
37 2zwa_A Leucine carboxyl methyl 98.8 9.5E-10 3.3E-14 124.1 2.4 175 322-520 315-547 (695)
38 2woz_A Kelch repeat and BTB do 98.8 1.4E-08 4.7E-13 102.8 9.8 92 424-521 128-254 (318)
39 2uvk_A YJHT; unknown function, 98.3 9.3E-07 3.2E-11 90.6 7.5 51 424-474 32-92 (357)
40 1hv2_A Elongin C, ELC1; protei 98.2 2E-06 6.9E-11 72.1 7.2 78 146-228 5-99 (99)
41 2uvk_A YJHT; unknown function, 98.2 2.2E-06 7.7E-11 87.7 8.0 94 423-522 168-318 (357)
42 2fnj_C Transcription elongatio 98.1 2.5E-06 8.4E-11 71.1 5.8 78 147-228 3-96 (96)
43 3v7d_A Suppressor of kinetocho 98.1 7.6E-06 2.6E-10 75.4 9.7 109 146-258 8-150 (169)
44 3drz_A BTB/POZ domain-containi 98.0 2.2E-05 7.6E-10 66.6 9.8 93 146-241 7-106 (107)
45 2zwa_A Leucine carboxyl methyl 98.0 7E-06 2.4E-10 92.5 8.4 90 422-520 467-606 (695)
46 1k3i_A Galactose oxidase precu 97.8 1.2E-05 4E-10 89.8 5.9 86 424-519 167-295 (656)
47 1vcb_B Protein (elongin C); tu 97.5 8.3E-05 2.9E-09 63.5 5.0 79 146-228 18-112 (112)
48 1k3i_A Galactose oxidase precu 97.4 0.00014 4.9E-09 81.0 6.5 78 424-519 433-518 (656)
49 3drx_A BTB/POZ domain-containi 96.8 0.0047 1.6E-07 57.8 9.5 94 145-241 12-112 (202)
50 3kvt_A Potassium channel prote 94.6 0.022 7.4E-07 48.7 3.4 93 146-241 6-104 (115)
51 1s1g_A Potassium voltage-gated 94.0 0.068 2.3E-06 46.2 5.5 90 145-240 13-110 (124)
52 1nn7_A Potassium channel KV4.2 92.5 0.052 1.8E-06 45.5 2.2 80 147-232 2-87 (105)
53 2nz0_B Potassium voltage-gated 91.8 0.15 5.1E-06 44.9 4.4 82 144-231 34-121 (140)
54 1t1d_A Protein (potassium chan 90.6 0.18 6.2E-06 41.7 3.6 83 147-232 3-90 (100)
55 2eqx_A Kelch repeat and BTB do 71.5 3.2 0.00011 34.1 3.7 35 208-244 6-40 (105)
56 3i3n_A Kelch-like protein 11; 64.9 19 0.00064 34.7 8.4 94 210-308 139-251 (279)
57 2vkp_A BTB/POZ domain-containi 63.2 4.5 0.00016 32.9 3.0 33 243-279 76-108 (109)
58 3htm_A Speckle-type POZ protei 52.6 9 0.00031 33.8 3.3 33 210-244 132-164 (172)
59 2r9r_B Paddle chimera voltage 45.5 19 0.00067 38.3 5.1 84 146-232 53-141 (514)
60 1r29_A B-cell lymphoma 6 prote 44.6 13 0.00043 31.2 2.8 33 243-279 94-126 (127)
61 2yy9_A Zinc finger and BTB dom 40.7 7.8 0.00027 33.1 0.8 38 243-284 86-123 (135)
62 3hqi_A Speckle-type POZ protei 40.3 17 0.00057 35.7 3.3 33 210-244 272-304 (312)
63 3hve_A Gigaxonin; ubiquitin, c 40.0 20 0.00068 34.0 3.8 92 243-364 98-189 (256)
64 1buo_A POZ domain, protein (pr 37.6 26 0.00087 29.0 3.6 33 243-279 88-120 (121)
65 3b84_A Zinc finger and BTB dom 36.8 12 0.00041 31.0 1.4 33 243-279 85-117 (119)
66 2q81_A MIZ-1 protein; BTB/POZ 36.3 22 0.00074 29.4 3.0 31 243-277 87-117 (119)
67 2vpk_A Myoneurin; transcriptio 35.9 18 0.00062 29.6 2.4 31 243-277 85-115 (116)
68 2z8h_A Transcription regulator 33.0 8.9 0.0003 32.8 -0.1 34 243-280 100-133 (138)
69 2if5_A Zinc finger and BTB dom 31.4 32 0.0011 28.2 3.2 30 243-276 90-119 (120)
70 2ppi_A Gigaxonin; BTB domain, 21.8 29 0.00098 29.8 1.2 30 243-276 114-143 (144)
No 1
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=100.00 E-value=3.3e-45 Score=370.06 Aligned_cols=250 Identities=20% Similarity=0.312 Sum_probs=226.3
Q ss_pred ccccccchhhccCCCCCCCCCeeEEEEEe-----EEEeehhhccccCHHHHHhhcCCCCCCCccEEEEec----CCCCHH
Q 008736 124 LNLKQCGEEATGNIDPAWSMDLSTVLRVK-----TVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRI----HASEEA 194 (555)
Q Consensus 124 ~~~~~~~l~~~l~~~~~~~~~~DV~l~v~-----~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~L~~----~~v~~~ 194 (555)
...|...+...++.+++.+.+|||+|.++ +|+|||+|||++|+||++||+++|+|+.+..|+|+. +++++.
T Consensus 12 ~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~ 91 (279)
T 3i3n_A 12 CSSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPD 91 (279)
T ss_dssp CTTHHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHH
T ss_pred CHhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHH
Confidence 34466778888888999999999999984 599999999999999999999999999999999862 279999
Q ss_pred HHHHHHHHHhcCccccCccchHHHHHHHhcccchhhhHHHHHHHHhcCCCChhhHHHHHhccchhhhhhchHHHHHHHHH
Q 008736 195 ALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQ 274 (555)
Q Consensus 195 ~f~~lL~fiYtg~l~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~~l~l~~~n~~~~l~~a~~~~~a~~~~~L~~~~~~ 274 (555)
+|+.+|+|+|||++.++. +++.+|+.+|++|+++.|++.|++||.+ .++++||+.++.+|..| ++..|.+.|.+
T Consensus 92 ~f~~ll~~~Ytg~~~i~~-~~v~~ll~~A~~l~i~~L~~~c~~~L~~-~l~~~n~~~i~~~A~~~----~~~~L~~~~~~ 165 (279)
T 3i3n_A 92 TVEAVIEYMYTGRIRVST-GSVHEVLELADRFLLIRLKEFCGEFLKK-KLHLSNCVAIHSLAHMY----TLSQLALKAAD 165 (279)
T ss_dssp HHHHHHHHHHHSEEEEET-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-HCCTTTHHHHHHHHHHT----TCHHHHHHHHH
T ss_pred HHHHHHHhhCcCCcccCH-HHHHHHHHHHHHHCcHHHHHHHHHHHHH-cCCcchHHHHHHHHHHc----CcHHHHHHHHH
Confidence 999999999999999998 8999999999999999999999999999 89999999999999999 89999999999
Q ss_pred HHHHhHHHhhccchhhhCCChhhhccccccccccCCCHHHHHHHHHHHHhhcCCChHHHHHHHHHHhhccccCCCCCHHH
Q 008736 275 FLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRK 354 (555)
Q Consensus 275 fi~~nf~~v~~~~~efl~L~~~~L~~LL~sd~L~V~sE~~V~~av~~Wi~~~~~~~~~R~~~l~~~Ll~~VRf~lls~~~ 354 (555)
||.+||.++.+ +++|.+||.+.+..||++|+|+|.+|.+||+++++|++|+ +++|.+++ ++||++||||+|++++
T Consensus 166 ~i~~~f~~v~~-~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~---~~~r~~~~-~~ll~~VRf~l~~~~~ 240 (279)
T 3i3n_A 166 MIRRNFHKVIQ-DEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRN---AEERERYF-EELFKLLRLSQMKPTY 240 (279)
T ss_dssp HHHHTHHHHTT-SSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTT---HHHHTTTH-HHHHTTSCGGGSCHHH
T ss_pred HHHHHHHHHhc-CcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcC---HHHHHHHH-HHHHHhcCCCCCCHHH
Confidence 99999999999 9999999999999999999999999999999999999998 88999998 8999999999999999
Q ss_pred HhhhccCCCCC--ChHHHHHHHHHHhhhccCcc
Q 008736 355 LKKVLTCNDFD--PELASKVVLESLFFKAETPY 385 (555)
Q Consensus 355 L~~~~~~~~l~--~~~~~~~l~eAl~~~~~~p~ 385 (555)
|.+.+..+++. ++.|++++.+|++||. .|.
T Consensus 241 L~~~v~~~~l~~~~~~c~~~l~ea~~~~~-~~~ 272 (279)
T 3i3n_A 241 LTRHVKPERLVANNEVCVKLVADAVERHA-LRA 272 (279)
T ss_dssp HHHTTTTSHHHHTCHHHHHHHHHHHHHHH-HTT
T ss_pred HHHHhhccchhcCCHHHHHHHHHHHHhcc-Cch
Confidence 99988877764 6899999999999998 443
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=100.00 E-value=5.4e-44 Score=356.64 Aligned_cols=238 Identities=16% Similarity=0.253 Sum_probs=197.7
Q ss_pred ccccccchhhccCCCCCCCCCeeEEEEE--eEEEeehhhccccCHHHHHhhcCCCC--CCCccEEEEecCCCCHHHHHHH
Q 008736 124 LNLKQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMR--ESEQRYVTLRIHASEEAALMEL 199 (555)
Q Consensus 124 ~~~~~~~l~~~l~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~amf~~~~~--Es~~~~I~L~~~~v~~~~f~~l 199 (555)
...|...+.+.++..+..+.+|||+|.+ ++|+|||.|||++|+||++||++++. |+.+..|.|+ ++++.+|+.+
T Consensus 11 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~--~v~~~~f~~l 88 (256)
T 3hve_A 11 DPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELE--GISVMVMREI 88 (256)
T ss_dssp CTTTHHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECS--SCCHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeC--CCCHHHHHHH
Confidence 3446677888899999999999999999 57999999999999999999999887 6677788887 9999999999
Q ss_pred HHHHhcCccccCccchHHHHHHHhcccchhhhHHHHHHHHhcCCCChhhHHHHHhccchhhhhhchHHHHHHHHHHHHHh
Q 008736 200 LNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAAR 279 (555)
Q Consensus 200 L~fiYtg~l~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~~l~l~~~n~~~~l~~a~~~~~a~~~~~L~~~~~~fi~~n 279 (555)
|+|+|||++.++. +++.+++.+|++|+++.|++.|++||.+ .++++||+.++.+|..| ++..|.+.|.+||.+|
T Consensus 89 l~~~Yt~~~~i~~-~~v~~ll~~A~~l~i~~l~~~c~~~L~~-~l~~~n~~~i~~~A~~~----~~~~L~~~~~~~i~~~ 162 (256)
T 3hve_A 89 LDYIFSGQIRLNE-DTIQDVVQAADLLLLTDLKTLCCEFLEG-CIAAENCIGIRDFALHY----CLHHVHYLATEYLETH 162 (256)
T ss_dssp HHHHHHSCCCCC--CCHHHHHHHHHHHTCHHHHHHHHHHHHH-TCCSSTTHHHHHHHHHT----TCHHHHHHHHHHHHHH
T ss_pred HhhccCCCCcccH-hHHHHHHHHHHHHChHHHHHHHHHHHHh-hCCHhhHHHHHHHHHHc----CcHHHHHHHHHHHHHH
Confidence 9999999999999 8999999999999999999999999999 89999999999999999 8999999999999999
Q ss_pred HHHhhccchhhhCCChhhhccccccccccCCCHHHHHHHHHHHHhhcCCChHHHHHHHHHHhhccccCCCCCHHHHhhhc
Q 008736 280 YKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVL 359 (555)
Q Consensus 280 f~~v~~~~~efl~L~~~~L~~LL~sd~L~V~sE~~V~~av~~Wi~~~~~~~~~R~~~l~~~Ll~~VRf~lls~~~L~~~~ 359 (555)
|.++.+ +++|.+||.+.+..||++|+|+|.+|.+||+++++|++|+ +++|.+++ ++||++||||+|++++|.+.+
T Consensus 163 f~~v~~-~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~---~~~R~~~~-~~ll~~VRf~~l~~~~l~~~v 237 (256)
T 3hve_A 163 FRDVSS-TEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHD---TEIRKVHM-KDVMSALWVSGLDSSYLREQM 237 (256)
T ss_dssp HHHHTT-CHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC-----CCSTTTH-HHHHHHHHHHTTCC-CHHHHH
T ss_pred HHHHhC-CcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcC---HHHHHHHH-HHHHHhCCCCCCCHHHHHHHH
Confidence 999999 9999999999999999999999999999999999999999 77898888 899999999999999999988
Q ss_pred cCCCCC--C-hHHHHHHH
Q 008736 360 TCNDFD--P-ELASKVVL 374 (555)
Q Consensus 360 ~~~~l~--~-~~~~~~l~ 374 (555)
+.+++. . +.|++++.
T Consensus 238 ~~~~l~~~~~~~c~~ll~ 255 (256)
T 3hve_A 238 LNEPLVREIVKECSNIPL 255 (256)
T ss_dssp HTSTTHHHHHCC------
T ss_pred hcChHHHhhHHHHHHHhh
Confidence 888875 2 35777765
No 3
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.94 E-value=2e-28 Score=250.88 Aligned_cols=200 Identities=22% Similarity=0.241 Sum_probs=151.3
Q ss_pred HHHHHHHHHhHhhhhccc-----ccccchhhccccCCCCCCCccccCCCCCCcccccccCCccccccccccchhhccCCC
Q 008736 64 DWARNRKRRREEIKKDTV-----DVLVQREQILQCNMPDTEDGVAYENQDDEPEAMVEESPADVGLNLKQCGEEATGNID 138 (555)
Q Consensus 64 ~w~~~r~~~R~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~l~~~l~~~ 138 (555)
+||+.++++|+++++++. |.+..++.+.....+..-. +.+....+..||++ +...+..+
T Consensus 105 ~wG~~~Fi~~~~L~~~~~~yl~dD~l~i~~~v~v~~~~~~~~-------~~~~~~~~~~p~~~---------l~~~l~~l 168 (312)
T 3hqi_A 105 DWGFKKFIRRGFLLDEANGLLPDDKLTLFCEVSVVQDSVNIS-------GQNTMNMVKVPECR---------LADELGGL 168 (312)
T ss_dssp EEEEEEEEEHHHHTCGGGCCCGGGCEEEEEEEEEEEECCCEE-------CCCCCSSCCCCCCC---------HHHHHHHH
T ss_pred CcCHHHhccHHHhhccccCeecCCEEEEEEEEEEEecccccc-------ccccccccCCCCch---------HHHHHHHH
Confidence 699999999999976532 3333444433221110000 11122233444442 22333344
Q ss_pred CCCCCCeeEEEEE--eEEEeehhhccccCHHHHHhhcCCCCCCCccEEEEecCCCCHHHHHHHHHHHhcCccccCccchH
Q 008736 139 PAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTAL 216 (555)
Q Consensus 139 ~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~L~~~~v~~~~f~~lL~fiYtg~l~i~~~~~v 216 (555)
...+.+|||+|.+ ++|+|||+|||++||||++||.++|.|+.+.+|.|+ ++++++|+.+|+|+|||++.++. +++
T Consensus 169 ~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~--~~~~~~f~~~L~~iYt~~~~~~~-~~~ 245 (312)
T 3hqi_A 169 WENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIN--DVEPEVFKEMMCFIYTGKAPNLD-KMA 245 (312)
T ss_dssp HHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEEC--SSCHHHHHHHHHHHHHSCCTTHH-HHH
T ss_pred HhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEec--CCCHHHHHHHHHhhcCCCCCChH-HHH
Confidence 4567899999999 579999999999999999999999999999999998 99999999999999999999988 899
Q ss_pred HHHHHHhcccchhhhHHHHHHHHhcCCCChhhHHHHHhccchhhhhhchHHHHHHHHHHHHHhHHHhhccch
Q 008736 217 LDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQE 288 (555)
Q Consensus 217 ~~lL~aAd~l~l~~L~~~C~~~L~~l~l~~~n~~~~l~~a~~~~~a~~~~~L~~~~~~fi~~nf~~v~~~~~ 288 (555)
.+||.+|++|+++.|+..|+++|.+ .++++||+.++.+|+.| ++..|+++|++||..||.++++ ++
T Consensus 246 ~~ll~~A~~~~~~~l~~~c~~~l~~-~~~~~n~~~~l~~A~~~----~~~~L~~~~~~~i~~~~~~v~~-s~ 311 (312)
T 3hqi_A 246 DDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILADLH----SADQLKTQAVDFINYHATDVLE-TS 311 (312)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHT-TCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHTC--------
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHc-cCCHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHHHHhh-CC
Confidence 9999999999999999999999999 89999999999999999 9999999999999999999987 54
No 4
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.94 E-value=1.7e-27 Score=222.44 Aligned_cols=149 Identities=23% Similarity=0.275 Sum_probs=133.2
Q ss_pred hhhccCCCCCCCCCeeEEEEE--eEEEeehhhccccCHHHHHhhcCCCCCCCccEEEEecCCCCHHHHHHHHHHHhcCcc
Q 008736 131 EEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTL 208 (555)
Q Consensus 131 l~~~l~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~L~~~~v~~~~f~~lL~fiYtg~l 208 (555)
+...+..+++.+.+|||+|.+ ++|+|||.||+++|+||++||.+++.|+.+..|.|+ ++++++|+.+|+|+|||++
T Consensus 21 l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~--~~~~~~f~~~l~~~Yt~~~ 98 (172)
T 3htm_A 21 LADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIN--DVEPEVFKEMMCFIYTGKA 98 (172)
T ss_dssp HHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEEC--SSCHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEec--CCCHHHHHHHHHHHhCCCC
Confidence 344455556678899999999 579999999999999999999999999999999998 9999999999999999999
Q ss_pred ccCccchHHHHHHHhcccchhhhHHHHHHHHhcCCCChhhHHHHHhccchhhhhhchHHHHHHHHHHHHHhHHHhhccch
Q 008736 209 STTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQE 288 (555)
Q Consensus 209 ~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~~l~l~~~n~~~~l~~a~~~~~a~~~~~L~~~~~~fi~~nf~~v~~~~~ 288 (555)
.++. +++.+|+.+|++|+++.|++.|+++|.+ .++++||+.++.+|..| +++.|++.|.+||.+||.++++ ++
T Consensus 99 ~~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~l~~~n~~~~~~~A~~~----~~~~L~~~~~~~i~~~~~~v~~-s~ 171 (172)
T 3htm_A 99 PNLD-KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILADLH----SADQLKTQAVDFINYHATDVLE-TS 171 (172)
T ss_dssp TTGG-GTHHHHHHHHHHTTCHHHHHHHHHHHHH-TCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHTC--------
T ss_pred CCcH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHHHHHHHHc-CC
Confidence 9988 8999999999999999999999999999 89999999999999999 8999999999999999999987 54
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.90 E-value=5.8e-25 Score=199.38 Aligned_cols=132 Identities=24% Similarity=0.273 Sum_probs=96.4
Q ss_pred hhhccCCCCCCCCCeeEEEEE--eEEEeehhhccccCHHHHHhhcCCCCCCCccEEEEecCCCCHHHHHHHHHHHhcCcc
Q 008736 131 EEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTL 208 (555)
Q Consensus 131 l~~~l~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~L~~~~v~~~~f~~lL~fiYtg~l 208 (555)
+...+...++.+.+|||+|.+ ++|+|||.||+++|+||++||.+++.|+.+..|.|+ ++++++|+.+|+|+|||++
T Consensus 12 l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~--~~~~~~~~~~l~~~Y~~~~ 89 (145)
T 4eoz_A 12 LADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEIN--DVEPEVFKEMMCFIYTGKA 89 (145)
T ss_dssp HHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEEC--SSCHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEec--CCCHHHHHHHHHhhccCcc
Confidence 334455556678899999999 579999999999999999999999999888999998 9999999999999999999
Q ss_pred ccCccchHHHHHHHhcccchhhhHHHHHHHHhcCCCChhhHHHHHhccchhhhhhchHHHHH
Q 008736 209 STTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTD 270 (555)
Q Consensus 209 ~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~~l~l~~~n~~~~l~~a~~~~~a~~~~~L~~ 270 (555)
.++. +++.+|+.+|++|+++.|++.|+++|.+ .++++||+.++.+|+.| ++..|++
T Consensus 90 ~~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~l~~~n~~~~l~~A~~~----~~~~Lk~ 145 (145)
T 4eoz_A 90 PNLD-KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILADLH----SADQLKT 145 (145)
T ss_dssp TTGG-GTHHHHHHHHHHTTCHHHHHHHHCC--------------------------------
T ss_pred CCcH-HHHHHHHHHHHHhCHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHh----CHHHhcC
Confidence 9988 8999999999999999999999999999 89999999999999999 7777753
No 6
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.87 E-value=8.7e-23 Score=179.31 Aligned_cols=111 Identities=26% Similarity=0.364 Sum_probs=97.7
Q ss_pred cccchhhccCCCCCCCCCeeEEEEE--eEEEeehhhccccCHHHHHhhcCCCCCCCccEEEEecCCCCHHHHHHHHHHHh
Q 008736 127 KQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMY 204 (555)
Q Consensus 127 ~~~~l~~~l~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~L~~~~v~~~~f~~lL~fiY 204 (555)
|...+...++.+++.+.+|||+|.+ ++|+|||+|||++|+||++||.++|.|+.+..|.|+ ++++++|+.+|+|+|
T Consensus 8 h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~--~~~~~~f~~ll~~~Y 85 (120)
T 2if5_A 8 HSSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEID--FVSAEALTALMDFAY 85 (120)
T ss_dssp HHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECC--SSCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeC--CCCHHHHHHHHHHHc
Confidence 4455666677778889999999999 579999999999999999999999999999999998 899999999999999
Q ss_pred cCccccCccchHHHHHHHhcccchhhhHHHHHHHHh
Q 008736 205 SSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 240 (555)
Q Consensus 205 tg~l~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~ 240 (555)
||++.++. +++.+|+.+|++|+++.|++.|++||.
T Consensus 86 t~~~~~~~-~~~~~ll~~A~~~~i~~L~~~C~~~L~ 120 (120)
T 2if5_A 86 TATLTVST-ANVGDILSAARLLEIPAVSHVCADLLD 120 (120)
T ss_dssp HSCCCCCG-GGHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred CCCCccCH-HHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 99999998 899999999999999999999999983
No 7
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.86 E-value=1e-22 Score=183.57 Aligned_cols=121 Identities=15% Similarity=0.149 Sum_probs=107.8
Q ss_pred ccccccchhhccCCCCCCCCCeeEEEEE--eEEEeehhhccccCHHHHHhhcCCCCCCCccEEEEecCCCCHHHHHHHHH
Q 008736 124 LNLKQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLN 201 (555)
Q Consensus 124 ~~~~~~~l~~~l~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~L~~~~v~~~~f~~lL~ 201 (555)
...+...+.+.++.++..+.+|||+|.+ ++|+|||+|||++|+||++||.+++.|. ..|.|+ .++++++|+.+|+
T Consensus 16 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~--~~i~l~-~~v~~~~~~~lL~ 92 (138)
T 2z8h_A 16 SSVHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAE--LTVTLP-EEVTVKGFEPLIQ 92 (138)
T ss_dssp CSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTT--EEEECC-TTSCHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCC--ceEEeC-CCCCHHHHHHHHH
Confidence 3345667777788888899999999999 5799999999999999999999998773 466663 3899999999999
Q ss_pred HHhcCccccCccchHHHHHHHhcccchhhhHHHHHHHHhcCCCChhhH
Q 008736 202 FMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESA 249 (555)
Q Consensus 202 fiYtg~l~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~~l~l~~~n~ 249 (555)
|||||++.++. +++.+|+.+|++|+++.|++.|++||.+ .++.+|+
T Consensus 93 ~~Ytg~~~i~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~-~l~~sna 138 (138)
T 2z8h_A 93 FAYTAKLILSK-DNVDEVCRCVEFLSVHNIEESCFQFLKF-KFLDSTS 138 (138)
T ss_dssp HHHHSCCCCCT-TTHHHHHHHHHHHTCGGGHHHHHHHTTC-CCSCCCC
T ss_pred HhcCCCcccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH-hcccccC
Confidence 99999999999 8999999999999999999999999999 8988773
No 8
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.86 E-value=2.1e-22 Score=178.75 Aligned_cols=112 Identities=18% Similarity=0.309 Sum_probs=103.2
Q ss_pred ccccchhhccCCCCCCCCCeeEEEEE--eEEEeehhhccccCHHHHHhhcCCCCCCCccEEEE-ecCCCCHHHHHHHHHH
Q 008736 126 LKQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTL-RIHASEEAALMELLNF 202 (555)
Q Consensus 126 ~~~~~l~~~l~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~L-~~~~v~~~~f~~lL~f 202 (555)
.|...+.+.++.++..+.+|||+|.+ ++|+|||+|||++|+||++||.+++.| .+..|.| + ++++++|+.+|+|
T Consensus 11 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~--~~~~~~f~~ll~~ 87 (127)
T 1r29_A 11 RHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDP--EINPEGFNILLDF 87 (127)
T ss_dssp THHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCT--TSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCC--CCCHHHHHHHHHH
Confidence 35556777777888899999999999 579999999999999999999999998 7788888 6 9999999999999
Q ss_pred HhcCccccCccchHHHHHHHhcccchhhhHHHHHHHHhc
Q 008736 203 MYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 241 (555)
Q Consensus 203 iYtg~l~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~~ 241 (555)
||||++.++. +++.+|+.+|++|+++.|++.|++||.+
T Consensus 88 ~Ytg~~~~~~-~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 88 MYTSRLNLRE-GNIMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp HHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HcCCCcCcCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 9999999998 8999999999999999999999999976
No 9
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.86 E-value=7.4e-22 Score=170.18 Aligned_cols=100 Identities=26% Similarity=0.379 Sum_probs=88.0
Q ss_pred CCCCCCCeeEEEEE-e-----EEEeehhhccccCHHHHHhhcCCCCCCCccEEEEecCCCCHHHHHHHHHHHhcCccccC
Q 008736 138 DPAWSMDLSTVLRV-K-----TVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTT 211 (555)
Q Consensus 138 ~~~~~~~~DV~l~v-~-----~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~L~~~~v~~~~f~~lL~fiYtg~l~i~ 211 (555)
.++.+.+|||+|.+ + .|+|||.|||++|+||++||+++|.|+. ..|.|+ ++++++|+.+|+|+|||++.++
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~--~~~~~~f~~~l~~iYt~~~~~~ 78 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIP--DVEPAAFLILLKYMYSDEIDLE 78 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEET--TSCHHHHHHHHHHHHHCCCCCC
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeC--CCCHHHHHHHHHHHcCCCccCC
Confidence 34577899999998 2 6999999999999999999999999988 888887 9999999999999999999999
Q ss_pred ccchHHHHHHHhcccchhhhHHHHHHHHhc
Q 008736 212 TPTALLDVLMAADKFEVASCMRYCSRLLRN 241 (555)
Q Consensus 212 ~~~~v~~lL~aAd~l~l~~L~~~C~~~L~~ 241 (555)
. +++.+|+.+|++|+++.|++.|++||.+
T Consensus 79 ~-~~~~~ll~~A~~~~~~~L~~~c~~~l~~ 107 (109)
T 2vkp_A 79 A-DTVLATLYAAKKYIVPALAKACVNFLET 107 (109)
T ss_dssp T-TTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 9 8999999999999999999999999986
No 10
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.86 E-value=2.6e-22 Score=182.23 Aligned_cols=115 Identities=17% Similarity=0.197 Sum_probs=99.9
Q ss_pred cccccccchhhccCCCCCCCCCeeEEEEE--eEEEeehhhccccCHHHHHhhcCCCCC--CCccEEEEecCCCCHHHHHH
Q 008736 123 GLNLKQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRE--SEQRYVTLRIHASEEAALME 198 (555)
Q Consensus 123 ~~~~~~~~l~~~l~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~amf~~~~~E--s~~~~I~L~~~~v~~~~f~~ 198 (555)
....+...+.+.++.++..+.+|||+|.+ ++|+|||+|||++|+||++||.+++.| +....|.|+ ++++++|+.
T Consensus 26 ~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~--~v~~~~f~~ 103 (144)
T 2ppi_A 26 SDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELE--GISVMVMRE 103 (144)
T ss_dssp CCTTHHHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECC--SSCHHHHHH
T ss_pred cCcchHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeC--CCCHHHHHH
Confidence 33446677888889999999999999999 579999999999999999999998876 566778887 999999999
Q ss_pred HHHHHhcCccccCccchHHHHHHHhcccchhhhHHHHHHHHh
Q 008736 199 LLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 240 (555)
Q Consensus 199 lL~fiYtg~l~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~ 240 (555)
+|+|+|||++.++. +++.+|+.+|++|+++.|++.|++||.
T Consensus 104 lL~fiYtg~~~i~~-~~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 104 ILDYIFSGQIRLNE-DTIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp HHHHHTTSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred HHHHHhCCCCCCCH-HHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 99999999999998 899999999999999999999999874
No 11
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.85 E-value=2e-22 Score=176.94 Aligned_cols=108 Identities=23% Similarity=0.267 Sum_probs=97.2
Q ss_pred cccchhhccCCCCCCCCCeeEEEEE--eEEEeehhhccccCHHHHHhhcCCCCCCCccEEEEecCCCCHHHHHHHHHHHh
Q 008736 127 KQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMY 204 (555)
Q Consensus 127 ~~~~l~~~l~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~L~~~~v~~~~f~~lL~fiY 204 (555)
|...+.+.++.+++.+.+|||+|.+ ++|+|||+|||++|+||++||.+++ +..|.|+ ++++++|+.+|+|+|
T Consensus 7 h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l~--~~~~~~f~~ll~~iY 80 (119)
T 3b84_A 7 HSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS----GGSVVLP--AGFAEIFGLLLDFFY 80 (119)
T ss_dssp HHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT----CCCEEEC--GGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC----CCeEEeC--CCCHHHHHHHHHHHc
Confidence 4456666777788889999999999 5799999999999999999999876 5678887 999999999999999
Q ss_pred cCccccCccchHHHHHHHhcccchhhhHHHHHHHHhc
Q 008736 205 SSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 241 (555)
Q Consensus 205 tg~l~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~~ 241 (555)
||++.++. +++.+|+.+|++|+++.|++.|++||.+
T Consensus 81 tg~~~~~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 81 TGHLALTS-GNRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp HSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred CCCCccCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 99999998 8999999999999999999999999976
No 12
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.84 E-value=2.8e-22 Score=179.99 Aligned_cols=113 Identities=21% Similarity=0.260 Sum_probs=95.9
Q ss_pred cccchhhccCCCCCCCCCeeEEEEE--eEEEeehhhccccCHHHHHhhcCCCCCCCccEEEEecCCCCHHHHHHHHHHHh
Q 008736 127 KQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMY 204 (555)
Q Consensus 127 ~~~~l~~~l~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~L~~~~v~~~~f~~lL~fiY 204 (555)
|...+.+.++.+++.+.+|||+|.+ ++|+|||+|||++|+||++||.+++ +..|.|+ ++++++|+.+|+|||
T Consensus 8 h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~--~~~~~~f~~lL~fiY 81 (135)
T 2yy9_A 8 HSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT----GGSVVLP--AGFAEIFGLLLDFFY 81 (135)
T ss_dssp HHHHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC--------CCEEEC--GGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC----CCeEEeC--CCCHHHHHHHHHHHh
Confidence 4556677788888899999999999 5799999999999999999999876 5578887 899999999999999
Q ss_pred cCccccCccchHHHHHHHhcccchhhhHHHHHHHHhcCCCChh
Q 008736 205 SSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCE 247 (555)
Q Consensus 205 tg~l~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~~l~l~~~ 247 (555)
||++.++. +++.+|+.+|++|+++.|++.|++||.+ .+...
T Consensus 82 tg~~~i~~-~~v~~ll~~A~~l~i~~L~~~C~~~l~~-~l~~~ 122 (135)
T 2yy9_A 82 TGHLALTS-GNRDQVLLAAKELRVPEAVELCQSFQPQ-TSVGQ 122 (135)
T ss_dssp HSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHCCC-------
T ss_pred CCCCCCCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH-hccCC
Confidence 99999999 8999999999999999999999999988 66443
No 13
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.84 E-value=6.5e-22 Score=172.67 Aligned_cols=110 Identities=16% Similarity=0.208 Sum_probs=97.3
Q ss_pred cccchhhccCCCCCCCCCeeEEEEE--eEEEeehhhccccCHHHHHhhcCCCCCCCccEEEEecCCCCHHHHHHHHHHHh
Q 008736 127 KQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMY 204 (555)
Q Consensus 127 ~~~~l~~~l~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~L~~~~v~~~~f~~lL~fiY 204 (555)
|...+.+.++.+++.+.+|||+|.+ ++|+|||.|||++|+||++||.++ .+..|.|+.+++++++|+.+|+|+|
T Consensus 5 h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~~~~f~~ll~~~Y 80 (116)
T 2vpk_A 5 HCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST----SENNVFLDQSQVKADGFQKLLEFIY 80 (116)
T ss_dssp HHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC----CCSCEECCTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC----CCCeEEeecCCCCHHHHHHHHHHHc
Confidence 3445666677777889999999999 579999999999999999999986 3567777655899999999999999
Q ss_pred cCccccCccchHHHHHHHhcccchhhhHHHHHHHHhc
Q 008736 205 SSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 241 (555)
Q Consensus 205 tg~l~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~~ 241 (555)
||++.++. +++.+|+.+|++|+++.|++.|++||.+
T Consensus 81 t~~~~~~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (116)
T 2vpk_A 81 TGTLNLDS-WNVKEIHQAADYLKVEEVVTKCKIKMED 116 (116)
T ss_dssp HSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred CCCcccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999998 8999999999999999999999999863
No 14
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.83 E-value=2e-21 Score=170.90 Aligned_cols=107 Identities=23% Similarity=0.318 Sum_probs=97.4
Q ss_pred cccchhhccCCCCCCCCCeeEEEEE--eEEEeehhhccccCHHHHHhhcCCCCCCCccEEEEecCCCCHHHHHHHHHHHh
Q 008736 127 KQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMY 204 (555)
Q Consensus 127 ~~~~l~~~l~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~L~~~~v~~~~f~~lL~fiY 204 (555)
|...+.+.++.+++.+.+|||+|.+ ++|+|||.|||++|+||++||.++ +..|.|+ ++++++|+.+|+|+|
T Consensus 11 ~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~--~~~~~~f~~ll~~~Y 83 (121)
T 1buo_A 11 HPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN-----SQHYTLD--FLSPKTFQQILEYAY 83 (121)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC-----CSEEEEC--SSCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC-----CcEEEeC--CCCHHHHHHHHHhhc
Confidence 4556667777788889999999999 479999999999999999999874 4578887 999999999999999
Q ss_pred cCccccCccchHHHHHHHhcccchhhhHHHHHHHHhc
Q 008736 205 SSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 241 (555)
Q Consensus 205 tg~l~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~~ 241 (555)
||++.++. +++.+++.+|++|+++.|++.|+++|.+
T Consensus 84 tg~~~~~~-~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 84 TATLQAKA-EDLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp HSCCCCCG-GGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCcCCCH-HHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 99999998 8999999999999999999999999976
No 15
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.83 E-value=3.1e-22 Score=177.09 Aligned_cols=111 Identities=18% Similarity=0.216 Sum_probs=100.5
Q ss_pred ccccccchhhccCCCCCCCCCeeEEEEE--eEEEeehhhccccCHHHHHhhcCCCCCCCccEEEEecCC-CCHHHHHHHH
Q 008736 124 LNLKQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHA-SEEAALMELL 200 (555)
Q Consensus 124 ~~~~~~~l~~~l~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~L~~~~-v~~~~f~~lL 200 (555)
...|...+.+.++.+++.+.+|||+|.+ ++|+|||.|||++|+||++||.+++.| +..|.++ + +++.+|+.+|
T Consensus 12 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~--~~~~~~~f~~~l 87 (125)
T 3ohu_A 12 STVHCTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN--DLVVSLP--EEVTARGFGPLL 87 (125)
T ss_dssp CSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS--SCEEECC--TTCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC--CcEEEeC--CCCCHHHHHHHH
Confidence 3446677788888888899999999999 579999999999999999999999877 5677776 7 9999999999
Q ss_pred HHHhcCccccCccchHHHHHHHhcccchhhhHHHHHHHH
Q 008736 201 NFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLL 239 (555)
Q Consensus 201 ~fiYtg~l~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L 239 (555)
+|||||++.++. +++.+|+.+|++|+++.|++.|++||
T Consensus 88 ~~iYtg~~~~~~-~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 88 QFAYTAKLLLSR-ENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp HHHTTSEEEECT-TTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred HhHcCCceEECH-HHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 999999999999 89999999999999999999998775
No 16
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.82 E-value=4.7e-22 Score=175.83 Aligned_cols=110 Identities=15% Similarity=0.172 Sum_probs=95.6
Q ss_pred cccchhhccCCCCCCCCCeeEEEEE--eEEEeehhhccccCHHHHHhhcCCCCCCCccEEEEecCCCCHHHHHHHHHHHh
Q 008736 127 KQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMY 204 (555)
Q Consensus 127 ~~~~l~~~l~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~L~~~~v~~~~f~~lL~fiY 204 (555)
+...+.+.++.+++.+.+|||+|.+ ++|+|||+|||++|+||++||.+++.|+ ..|.++ .++++++|+.+|+|+|
T Consensus 12 ~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~--~~i~l~-~~v~~~~f~~lL~~iY 88 (124)
T 2ihc_A 12 HSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE--LNITLP-EEVTVKGFEPLIQFAY 88 (124)
T ss_dssp HHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C--EEEECC-TTSCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC--ceEeec-CCcCHHHHHHHHHHhc
Confidence 4556677777888889999999999 5799999999999999999999998774 466663 3899999999999999
Q ss_pred cCccccCccchHHHHHHHhcccchhhhHHHHHHHHh
Q 008736 205 SSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 240 (555)
Q Consensus 205 tg~l~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~ 240 (555)
||++.++. +++.+|+.+|++|+++.|++.|++||.
T Consensus 89 tg~~~i~~-~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 89 TAKLILSK-ENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HSEEEEET-TTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred CCCcccCH-HHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 99999998 899999999999999999999999875
No 17
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.82 E-value=7.9e-22 Score=173.06 Aligned_cols=107 Identities=24% Similarity=0.286 Sum_probs=96.2
Q ss_pred ccccchhhccCCCCCCCCCeeEEEEE--eEEEeehhhccccCHHHHHhhcCCCCCCCccEEEEecCCCCHHHHHHHHHHH
Q 008736 126 LKQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFM 203 (555)
Q Consensus 126 ~~~~~l~~~l~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~L~~~~v~~~~f~~lL~fi 203 (555)
.|...+...++.+++.+.+|||+|.+ ++|+|||.|||++|+||++||+++ +..|.|+ ++++++|+.+|+|+
T Consensus 9 ~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~--~~~~~~f~~ll~~~ 81 (119)
T 2q81_A 9 QHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ-----KDVVHLD--ISNAAGLGQVLEFM 81 (119)
T ss_dssp HHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC-----CSGGGGG--GCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeC--CCCHHHHHHHHHHH
Confidence 45666777788888899999999999 579999999999999999999873 3456665 89999999999999
Q ss_pred hcCccccCccchHHHHHHHhcccchhhhHHHHHHHHh
Q 008736 204 YSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 240 (555)
Q Consensus 204 Ytg~l~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~ 240 (555)
|||++.++. +++.+|+.+|++|+++.|++.|++||.
T Consensus 82 Ytg~~~i~~-~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 82 YTAKLSLSP-ENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp HHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cCCCCccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 999999999 899999999999999999999999985
No 18
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.80 E-value=3.8e-21 Score=171.12 Aligned_cols=110 Identities=18% Similarity=0.203 Sum_probs=92.5
Q ss_pred ccccchhhccCCCCCCCCCeeEEEEE--eEEEeehhhccccCHHHHHhhcCCCCCCCccEEEEecCCCCHHHHHHHHHHH
Q 008736 126 LKQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFM 203 (555)
Q Consensus 126 ~~~~~l~~~l~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~L~~~~v~~~~f~~lL~fi 203 (555)
.+...+...++.+++.+.+|||+|.+ +.|+|||.|||++|+||++||.++ .+..|.|+ .++++++|+.+|+|+
T Consensus 15 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l~-~~~~~~~f~~ll~~i 89 (129)
T 3ga1_A 15 NFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS----RSAVVELP-AAVQPQSFQQILSFC 89 (129)
T ss_dssp THHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC----CCSEEECC-TTCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC----CCCEEEEC-CCCCHHHHHHHHHHH
Confidence 35566777788888889999999999 579999999999999999999986 45677773 379999999999999
Q ss_pred hcCccccCccchHHHHHHHhcccchhhhHHHHHHHHhc
Q 008736 204 YSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 241 (555)
Q Consensus 204 Ytg~l~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~~ 241 (555)
|||++.++. +++.+|+.+|++|+++.|++.|++||.+
T Consensus 90 Ytg~~~i~~-~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 90 YTGRLSMNV-GDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp HHSEEECCT-TTHHHHHHHHHHTTBTTSSCC-------
T ss_pred hCCccccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999999 8999999999999999999999999987
No 19
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.80 E-value=1.7e-20 Score=164.51 Aligned_cols=101 Identities=18% Similarity=0.154 Sum_probs=86.6
Q ss_pred cccchhhccCCCCCCCCCeeEEEEE--eEEEeehhhccccCHHHHHhhcCCCCCCCccEEEEecCCCCHHHHHHHHHHHh
Q 008736 127 KQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMY 204 (555)
Q Consensus 127 ~~~~l~~~l~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~L~~~~v~~~~f~~lL~fiY 204 (555)
+.+.+...++ +..+.+|||+|.+ ++|+|||+|||++|+||++ .+..|.|+ ++++++|+.+|+|+|
T Consensus 15 ~~~~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~---------~~~~i~l~--~v~~~~f~~ll~fiY 81 (119)
T 3m5b_A 15 GSDRLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR---------RGQWALGE--GISPSTFAQLLNFVY 81 (119)
T ss_dssp TTCHHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC---------CEEEECCS--SCCHHHHHHHHHHHT
T ss_pred chHHHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc---------CCCEEEeC--CCCHHHHHHHHHHHc
Confidence 3445555443 5668999999999 5799999999999999974 34567776 999999999999999
Q ss_pred cCccccCccchHHHHHHHhcccchhhhHHHHHHHHhc
Q 008736 205 SSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 241 (555)
Q Consensus 205 tg~l~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~~ 241 (555)
||++.++. +++.+||.+|++|+++.|++.|++++++
T Consensus 82 tg~~~i~~-~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 82 GESVELQP-GELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp TCCEEECG-GGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CCCcCcCH-HHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 99999999 8999999999999999999999999875
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.76 E-value=2.1e-19 Score=156.93 Aligned_cols=101 Identities=20% Similarity=0.228 Sum_probs=90.2
Q ss_pred cccccchhhccCCCCCCCCCeeEEEEE--eEEEeehhhccccCHHHHHhhcCCCCCCCccEEEEecCCCCHHHHHHHHHH
Q 008736 125 NLKQCGEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNF 202 (555)
Q Consensus 125 ~~~~~~l~~~l~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~L~~~~v~~~~f~~lL~f 202 (555)
+.+...+.+.++.+++.+.+|||+|.+ +.|+|||.|||++|+||++||.++ +..|.|+ ++++++|+.+|+|
T Consensus 12 ~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~-----~~~i~l~--~~~~~~f~~~l~~ 84 (116)
T 3fkc_A 12 IQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA-----GQVVELS--FIRAEIFAEILNY 84 (116)
T ss_dssp TTHHHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC-----CSEEEEC--SSCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeC--CCCHHHHHHHHHh
Confidence 335566777788888899999999999 579999999999999999999875 5678887 9999999999999
Q ss_pred HhcCcc-ccCccchHHHHHHHhcccchhhhHH
Q 008736 203 MYSSTL-STTTPTALLDVLMAADKFEVASCMR 233 (555)
Q Consensus 203 iYtg~l-~i~~~~~v~~lL~aAd~l~l~~L~~ 233 (555)
+|||++ .++. +++.+++.+|++|+++.|++
T Consensus 85 ~Ytg~~~~~~~-~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 85 IYSSKIVRVRS-DLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HTTSCCCSCCH-HHHHHHHHHHHHHTCHHHHT
T ss_pred hcCCCcCCCCH-HHHHHHHHHHHHhCccccCc
Confidence 999999 6888 89999999999999999874
No 21
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=2.3e-18 Score=147.46 Aligned_cols=95 Identities=16% Similarity=0.220 Sum_probs=90.6
Q ss_pred hcCCCChhhHHHHHhccchhhhhhchHHHHHHHHHHHHHhHHHhhccchhhhCCChhhhccccccccccCCCHHHHHHHH
Q 008736 240 RNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFA 319 (555)
Q Consensus 240 ~~l~l~~~n~~~~l~~a~~~~~a~~~~~L~~~~~~fi~~nf~~v~~~~~efl~L~~~~L~~LL~sd~L~V~sE~~V~~av 319 (555)
.+ +++++||+.++.+|+.| +++.|.++|.+||.+||.++.+ +++|++||.++|..||++| |.+|.+||+|+
T Consensus 5 ~~-~L~~~NCl~i~~~A~~~----~~~~L~~~a~~fi~~nF~~v~~-~~eFl~L~~~~L~~lL~sd---v~~E~~vf~av 75 (105)
T 2eqx_A 5 SS-GVQVGNCLQVMWLADRH----SDPELYTAAKHCAKTHLAQLQN-TEEFLHLPHRLLTDIISDG---VPCSQNPTEAI 75 (105)
T ss_dssp CC-CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHTCHHHHT-SHHHHHSCHHHHHHHHHTC---EETTSCHHHHH
T ss_pred hc-cCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHHHh-cccHhhCCHHHHHHHHcCC---CCCHHHHHHHH
Confidence 45 79999999999999999 9999999999999999999999 9999999999999999997 78999999999
Q ss_pred HHHHhhcCCChHHHHHHHHHHhhccccC
Q 008736 320 LKWARTHYPKLEERREILGSRLGRLIRF 347 (555)
Q Consensus 320 ~~Wi~~~~~~~~~R~~~l~~~Ll~~VRf 347 (555)
++|++|+ +++|.+++ ++||++||+
T Consensus 76 ~~Wv~~d---~~~R~~~~-~~Ll~~VR~ 99 (105)
T 2eqx_A 76 EAWINFN---KEEREAFA-ESLRTSLKE 99 (105)
T ss_dssp HHHHHTT---HHHHHHHH-HHHHHHCCE
T ss_pred HHHHHcC---HHHHHHHH-HHHHHHHHH
Confidence 9999999 88999998 899999995
No 22
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.41 E-value=5.5e-13 Score=122.59 Aligned_cols=109 Identities=17% Similarity=0.282 Sum_probs=88.8
Q ss_pred EEEEE---eEEEeehhhccccCHHHHHhhcC-CCC-CCCccEEEEecCCCCHHHHHHHHHHHhcCc--------------
Q 008736 147 TVLRV---KTVHISSPILAAKSPFFYKLFSN-GMR-ESEQRYVTLRIHASEEAALMELLNFMYSST-------------- 207 (555)
Q Consensus 147 V~l~v---~~f~aHr~ILaa~S~yF~amf~~-~~~-Es~~~~I~L~~~~v~~~~f~~lL~fiYtg~-------------- 207 (555)
|+|.. +.|.+||.+ |+.|+||++||.+ ++. |+.+..|.|+ +++..+++.+++|+|++.
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~--~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~ 79 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLP--NVNAAILKKVIQWCTHHKDDPPPPEDDENKEK 79 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECT--TSCHHHHHHHHHHHHHTTTCCC----------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCC--CccHHHHHHHHHHHHHcCcCCCCccccccccc
Confidence 66665 479999999 8999999999998 777 7777788887 999999999999999988
Q ss_pred ------------cccCccchHHHHHHHhcccchhhhHHHHHHHHhcC--CCChhhHHHHHhccchh
Q 008736 208 ------------LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNL--PMTCESALLYLDLPSSV 259 (555)
Q Consensus 208 ------------l~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~~l--~l~~~n~~~~l~~a~~~ 259 (555)
+.++. .++.+|+.||++|+|..|.+.|++++..+ ..+++.+-.++.+..-+
T Consensus 80 ~~~~i~~wD~~F~~id~-~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~ 144 (159)
T 2ast_A 80 RTDDIPVWDQEFLKVDQ-GTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDF 144 (159)
T ss_dssp -CCCCCHHHHHHTCSCH-HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCS
T ss_pred chhhhhHHHHHHHcCCH-HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCC
Confidence 67777 89999999999999999999999999762 44666666676665544
No 23
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.13 E-value=7.8e-11 Score=98.94 Aligned_cols=78 Identities=18% Similarity=0.227 Sum_probs=62.7
Q ss_pred EEEEE---eEEEeehhhccccCHHHHHhhcC--CCCCCCccEEEEecCCCCHHHHHHHHHHHh-----c---Cccc---c
Q 008736 147 TVLRV---KTVHISSPILAAKSPFFYKLFSN--GMRESEQRYVTLRIHASEEAALMELLNFMY-----S---STLS---T 210 (555)
Q Consensus 147 V~l~v---~~f~aHr~ILaa~S~yF~amf~~--~~~Es~~~~I~L~~~~v~~~~f~~lL~fiY-----t---g~l~---i 210 (555)
|+|.. .+|.+||.+ |+.|+||++||.+ ++.|+.+..|.|+ ++++.+++.+++|+| + ++++ +
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~--~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i 80 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFR--EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPI 80 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECT--TSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECC--CCCHHHHHHHHHHHHHhcccCCCcCCCCcCcC
Confidence 45554 479999999 9999999999987 6788888888887 999999999999999 5 6777 8
Q ss_pred CccchHHHHHHHhcccch
Q 008736 211 TTPTALLDVLMAADKFEV 228 (555)
Q Consensus 211 ~~~~~v~~lL~aAd~l~l 228 (555)
+. +++.+|+.||++|+.
T Consensus 81 ~~-~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 81 AP-EIALELLMAANFLDC 97 (97)
T ss_dssp CG-GGHHHHHHHHHHHTC
T ss_pred CH-HHHHHHHHHHhhhCC
Confidence 88 899999999999873
No 24
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.05 E-value=6.2e-10 Score=111.65 Aligned_cols=88 Identities=15% Similarity=0.148 Sum_probs=73.3
Q ss_pred eccccccc---eeeccC--CCceeEEEEEECCcEEEEcccCCccccccEEEEE---------------------------
Q 008736 427 YLDLKREE---CAHLFP--AGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFG--------------------------- 474 (555)
Q Consensus 427 ~~d~~~~~---W~~l~p--~~R~~~~~~vl~g~lYviGG~~~~~~~rs~~~y~--------------------------- 474 (555)
.||+.++. |..+.+ .+|.+|++++++|++|++||..+....+++++||
T Consensus 82 ~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ 161 (301)
T 2vpj_A 82 CLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGV 161 (301)
T ss_dssp EEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTE
T ss_pred EEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCE
Confidence 48888888 998876 8899999999999999999987765677888887
Q ss_pred --eeecccCCCCcceeeccccceEecC---CCceecCCCCceeeccceeec
Q 008736 475 --LFLGMQEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVG 520 (555)
Q Consensus 475 --~~gG~~~~~~l~s~V~~~~~ErYdp---~W~~va~m~~~~~~~g~~~~g 520 (555)
++||.++...++.+ ++||| +|+.+++|+.+|..+++++++
T Consensus 162 iyv~GG~~~~~~~~~~------~~~d~~~~~W~~~~~~p~~r~~~~~~~~~ 206 (301)
T 2vpj_A 162 IYCLGGYDGLNILNSV------EKYDPHTGHWTNVTPMATKRSGAGVALLN 206 (301)
T ss_dssp EEEECCBCSSCBCCCE------EEEETTTTEEEEECCCSSCCBSCEEEEET
T ss_pred EEEECCCCCCcccceE------EEEeCCCCcEEeCCCCCcccccceEEEEC
Confidence 46777666556664 99999 999999999999988766544
No 25
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.04 E-value=5.8e-10 Score=112.25 Aligned_cols=90 Identities=11% Similarity=0.039 Sum_probs=73.8
Q ss_pred eccccccceeeccC--CCceeEEEEEECCcEEEEcccC-CccccccEEEEE-----------------------------
Q 008736 427 YLDLKREECAHLFP--AGRIYSQAFHLGGQGFFLSAHC-NMDQQSSFHCFG----------------------------- 474 (555)
Q Consensus 427 ~~d~~~~~W~~l~p--~~R~~~~~~vl~g~lYviGG~~-~~~~~rs~~~y~----------------------------- 474 (555)
.||+.+++|..+.+ .+|.+|++++++|++|++||.+ +....+.+++||
T Consensus 74 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 153 (306)
T 3ii7_A 74 CYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIY 153 (306)
T ss_dssp EEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE
T ss_pred EEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEE
Confidence 48888888988865 8899999999999999999987 555677888887
Q ss_pred eeecccCCCC----cceeeccccceEecC---CCceecCCCCceeeccceeeccc
Q 008736 475 LFLGMQEKGS----VSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYR 522 (555)
Q Consensus 475 ~~gG~~~~~~----l~s~V~~~~~ErYdp---~W~~va~m~~~~~~~g~~~~g~~ 522 (555)
++||.++... ++.+ |+||| +|+.+++|+.+|..+++++++++
T Consensus 154 v~GG~~~~~~~~~~~~~~------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~ 202 (306)
T 3ii7_A 154 VCGGSLGNNVSGRVLNSC------EVYDPATETWTELCPMIEARKNHGLVFVKDK 202 (306)
T ss_dssp EECCEESCTTTCEECCCE------EEEETTTTEEEEECCCSSCCBSCEEEEETTE
T ss_pred EECCCCCCCCcccccceE------EEeCCCCCeEEECCCccchhhcceEEEECCE
Confidence 4677766554 5664 99999 99999999999999887766543
No 26
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.02 E-value=7.5e-10 Score=111.20 Aligned_cols=90 Identities=12% Similarity=0.078 Sum_probs=75.0
Q ss_pred eccccccceeeccC--CCceeEEEEEECCcEEEEcccCCccccccEEEEE-----------------------------e
Q 008736 427 YLDLKREECAHLFP--AGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFG-----------------------------L 475 (555)
Q Consensus 427 ~~d~~~~~W~~l~p--~~R~~~~~~vl~g~lYviGG~~~~~~~rs~~~y~-----------------------------~ 475 (555)
.||+.+++|..+.+ .+|.+|++++++|+||++||.++....+.+++|| +
T Consensus 177 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v 256 (302)
T 2xn4_A 177 CYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYV 256 (302)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEE
T ss_pred EEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEE
Confidence 38888899998865 8899999999999999999987655567788887 4
Q ss_pred eecccCCCCcceeeccccceEecC---CCceec-CCCCceeeccceeeccc
Q 008736 476 FLGMQEKGSVSFAVDYEFAARIKP---TEEYVS-KYKGNYTFTGGKAVGYR 522 (555)
Q Consensus 476 ~gG~~~~~~l~s~V~~~~~ErYdp---~W~~va-~m~~~~~~~g~~~~g~~ 522 (555)
+||.++...++.+ |+||| +|+.++ +|+.+|..+++++++++
T Consensus 257 ~GG~~~~~~~~~v------~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~ 301 (302)
T 2xn4_A 257 VGGDDGSCNLASV------EYYNPTTDKWTVVSSCMSTGRSYAGVTVIDKR 301 (302)
T ss_dssp ECCBCSSSBCCCE------EEEETTTTEEEECSSCCSSCCBSCEEEEEEC-
T ss_pred ECCcCCCcccccE------EEEcCCCCeEEECCcccCcccccceEEEeccc
Confidence 6777666556664 99999 899997 89999999999999864
No 27
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.95 E-value=8.3e-10 Score=99.15 Aligned_cols=98 Identities=13% Similarity=0.183 Sum_probs=80.8
Q ss_pred EEEEE---eEEEeehhhccccCHHHHHhhcCCCCCCCccEEEEecCCCCHHHHHHHHHHHhcCc----------------
Q 008736 147 TVLRV---KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSST---------------- 207 (555)
Q Consensus 147 V~l~v---~~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~L~~~~v~~~~f~~lL~fiYtg~---------------- 207 (555)
|+|.. +.|.+|+.+ |..|++|++||.+.- ...|.|+ +++..+++.+++|+|+..
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~----~~~Ipl~--~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~ 76 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG----MDPVPLP--NVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 76 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC----CSSEECT--TCCHHHHHHHHHHHHHHTTCC-------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC----CCceecC--CcCHHHHHHHHHHHHHhccCCCccccccccccch
Confidence 56665 579999998 889999999998631 4467776 999999999999999865
Q ss_pred ----------cccCccchHHHHHHHhcccchhhhHHHHHHHHhcCCCChhhHHHHH
Q 008736 208 ----------LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYL 253 (555)
Q Consensus 208 ----------l~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~~l~l~~~n~~~~l 253 (555)
+.++. +++.+|+.||++|++..|.+.|++++.. .+...+.-.+.
T Consensus 77 ~~i~~wD~~F~~vd~-~~l~eLi~AAnyL~I~~Lldl~c~~vA~-~ikgkt~eeiR 130 (141)
T 1fs1_B 77 DDIPVWDQEFLKVDQ-GTLFELILAANYLDIKGLLDVTCKTVAN-MIKGKTPEEIR 130 (141)
T ss_dssp ----HHHHHHTCSCH-HHHHHHHHHHHHHTCHHHHHHHHHHHHH-HHTTCCHHHHH
T ss_pred hhhhHHHHHHHhCCH-HHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHcCCCHHHHH
Confidence 55666 8999999999999999999999999988 46555554443
No 28
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.95 E-value=2.1e-09 Score=108.43 Aligned_cols=87 Identities=14% Similarity=0.037 Sum_probs=70.1
Q ss_pred eccccccceeeccC--CCceeEEEEEECCcEEEEcccCCccccccEEEEE-----------------------------e
Q 008736 427 YLDLKREECAHLFP--AGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFG-----------------------------L 475 (555)
Q Consensus 427 ~~d~~~~~W~~l~p--~~R~~~~~~vl~g~lYviGG~~~~~~~rs~~~y~-----------------------------~ 475 (555)
.||+.+++|..+.+ .+|..+++++++++||++||.++....+.+++|| +
T Consensus 188 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v 267 (308)
T 1zgk_A 188 CYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYV 267 (308)
T ss_dssp EEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEE
T ss_pred EEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEEE
Confidence 37888888988865 7888999999999999999987655567778887 4
Q ss_pred eecccCCCCcceeeccccceEecC---CCceecCCCCceeeccceee
Q 008736 476 FLGMQEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAV 519 (555)
Q Consensus 476 ~gG~~~~~~l~s~V~~~~~ErYdp---~W~~va~m~~~~~~~g~~~~ 519 (555)
+||.++...++.+ ++||| +|+.+++|+.+|..++++++
T Consensus 268 ~GG~~~~~~~~~v------~~yd~~~~~W~~~~~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 268 LGGYDGHTFLDSV------ECYDPDTDTWSEVTRMTSGRSGVGVAVT 308 (308)
T ss_dssp ECCBCSSCBCCEE------EEEETTTTEEEEEEECSSCCBSCEEEEC
T ss_pred EcCcCCCcccceE------EEEcCCCCEEeecCCCCCCcccceeEeC
Confidence 6777665556664 99999 89999999999998887764
No 29
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.95 E-value=2.4e-09 Score=108.03 Aligned_cols=90 Identities=17% Similarity=0.135 Sum_probs=75.0
Q ss_pred eccccccceeeccC--CCceeEEEEEECCcEEEEcccCCccccccEEEEE-----------------------------e
Q 008736 427 YLDLKREECAHLFP--AGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFG-----------------------------L 475 (555)
Q Consensus 427 ~~d~~~~~W~~l~p--~~R~~~~~~vl~g~lYviGG~~~~~~~rs~~~y~-----------------------------~ 475 (555)
.||+.+++|..+.+ .+|..|++++++|++|++||.++....+.+++|| +
T Consensus 141 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv 220 (308)
T 1zgk_A 141 RYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYA 220 (308)
T ss_dssp EEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEE
T ss_pred EECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEE
Confidence 38888999999876 8899999999999999999987765677888887 4
Q ss_pred eecccCCCCcceeeccccceEecC---CCceecCCCCceeeccceeeccc
Q 008736 476 FLGMQEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYR 522 (555)
Q Consensus 476 ~gG~~~~~~l~s~V~~~~~ErYdp---~W~~va~m~~~~~~~g~~~~g~~ 522 (555)
+||.++...+..+ ++||| +|+.+++|+.+|..+++++++++
T Consensus 221 ~GG~~~~~~~~~v------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~ 264 (308)
T 1zgk_A 221 AGGYDGQDQLNSV------ERYDVETETWTFVAPMKHRRSALGITVHQGR 264 (308)
T ss_dssp ECCBCSSSBCCCE------EEEETTTTEEEECCCCSSCCBSCEEEEETTE
T ss_pred EeCCCCCCccceE------EEEeCCCCcEEECCCCCCCccceEEEEECCE
Confidence 6777766556665 99999 89999999999998887766543
No 30
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.94 E-value=2.2e-09 Score=108.63 Aligned_cols=89 Identities=7% Similarity=-0.060 Sum_probs=74.0
Q ss_pred eccccccceeeccC--CCceeEEEEEECCcEEEEccc-CCccccccEEEEE-----------------------------
Q 008736 427 YLDLKREECAHLFP--AGRIYSQAFHLGGQGFFLSAH-CNMDQQSSFHCFG----------------------------- 474 (555)
Q Consensus 427 ~~d~~~~~W~~l~p--~~R~~~~~~vl~g~lYviGG~-~~~~~~rs~~~y~----------------------------- 474 (555)
.||+.+++|..+.+ .+|..|++++++|++|++||. .+....+.+++||
T Consensus 121 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 200 (315)
T 4asc_A 121 CYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRII 200 (315)
T ss_dssp EEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE
T ss_pred EECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEE
Confidence 48888888998876 889999999999999999998 4455677888887
Q ss_pred eeecccCCCCcceeeccccceEecC---CCceecCCCCceeeccceeecc
Q 008736 475 LFLGMQEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGY 521 (555)
Q Consensus 475 ~~gG~~~~~~l~s~V~~~~~ErYdp---~W~~va~m~~~~~~~g~~~~g~ 521 (555)
++||.++.+.++.+ ++||| +|+.+++|+.+|..++++++++
T Consensus 201 v~GG~~~~~~~~~~------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 244 (315)
T 4asc_A 201 VAAGVTDTGLTSSA------EVYSITDNKWAPFEAFPQERSSLSLVSLVG 244 (315)
T ss_dssp EEEEECSSSEEEEE------EEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred EEeccCCCCccceE------EEEECCCCeEEECCCCCCcccceeEEEECC
Confidence 46787776666675 99999 8999999999999987775554
No 31
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.93 E-value=2.3e-09 Score=107.83 Aligned_cols=90 Identities=13% Similarity=0.021 Sum_probs=75.1
Q ss_pred eccccccceeeccC--CCceeEEEEEECCcEEEEcccCCccc----cccEEEEE--------------------------
Q 008736 427 YLDLKREECAHLFP--AGRIYSQAFHLGGQGFFLSAHCNMDQ----QSSFHCFG-------------------------- 474 (555)
Q Consensus 427 ~~d~~~~~W~~l~p--~~R~~~~~~vl~g~lYviGG~~~~~~----~rs~~~y~-------------------------- 474 (555)
.||+.+++|..+.+ .+|..|++++++|++|++||..+... .+.+++||
T Consensus 122 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 201 (306)
T 3ii7_A 122 CYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKD 201 (306)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred EEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECC
Confidence 38888999999876 78999999999999999999876544 78889998
Q ss_pred ---eeecccCCCCcceeeccccceEecC---CCceecCCCCceeeccceeeccc
Q 008736 475 ---LFLGMQEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYR 522 (555)
Q Consensus 475 ---~~gG~~~~~~l~s~V~~~~~ErYdp---~W~~va~m~~~~~~~g~~~~g~~ 522 (555)
++||.++...++.+ ++||| +|+.+++|+.+|..+++++++++
T Consensus 202 ~i~v~GG~~~~~~~~~~------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~ 249 (306)
T 3ii7_A 202 KIFAVGGQNGLGGLDNV------EYYDIKLNEWKMVSPMPWKGVTVKCAAVGSI 249 (306)
T ss_dssp EEEEECCEETTEEBCCE------EEEETTTTEEEECCCCSCCBSCCEEEEETTE
T ss_pred EEEEEeCCCCCCCCceE------EEeeCCCCcEEECCCCCCCccceeEEEECCE
Confidence 46777766556664 99999 89999999999999887766654
No 32
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.92 E-value=3.2e-09 Score=107.42 Aligned_cols=94 Identities=11% Similarity=0.087 Sum_probs=74.1
Q ss_pred ceeEeccccccceeeccC--CCceeEEEEEECCcEEEEcccC---CccccccEEEEE-----------------------
Q 008736 423 QCVVYLDLKREECAHLFP--AGRIYSQAFHLGGQGFFLSAHC---NMDQQSSFHCFG----------------------- 474 (555)
Q Consensus 423 ~~w~~~d~~~~~W~~l~p--~~R~~~~~~vl~g~lYviGG~~---~~~~~rs~~~y~----------------------- 474 (555)
+....||+.+++|..+.+ .+|.+|++++++|++|++||.+ +....+++++||
T Consensus 67 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 146 (315)
T 4asc_A 67 AYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS 146 (315)
T ss_dssp EEEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE
T ss_pred cceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE
Confidence 345668888888888765 7899999999999999999974 345577788887
Q ss_pred ------eeeccc-CCCCcceeeccccceEecC---CCceecCCCCceeeccceeeccc
Q 008736 475 ------LFLGMQ-EKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYR 522 (555)
Q Consensus 475 ------~~gG~~-~~~~l~s~V~~~~~ErYdp---~W~~va~m~~~~~~~g~~~~g~~ 522 (555)
++||.+ +...++.+ ++||| +|+.+++|+.+|..+++++++++
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~ 198 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKM------CVYDPKKFEWKELAPMQTARSLFGATVHDGR 198 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCE------EEEETTTTEEEECCCCSSCCBSCEEEEETTE
T ss_pred ECCEEEEEeCCCCCCcccceE------EEEeCCCCeEEECCCCCCchhceEEEEECCE
Confidence 467773 34445564 99999 89999999999999887766543
No 33
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.90 E-value=4.5e-10 Score=103.09 Aligned_cols=100 Identities=10% Similarity=0.227 Sum_probs=60.4
Q ss_pred eEEEeehhhccccCHHHHHhhcCCCCCCCccEEEEecCCCCHHHHHHHHHHHhcCc------------------------
Q 008736 152 KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSST------------------------ 207 (555)
Q Consensus 152 ~~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~L~~~~v~~~~f~~lL~fiYtg~------------------------ 207 (555)
+.|.+|+.+ |..|++|+.||.+.. ....|.|+ +++..+++.+++|+|+..
T Consensus 14 ~~f~v~~~v-A~~S~~ik~ml~~~~---~~~~Ipl~--~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~i~~wD 87 (160)
T 2p1m_A 14 ESFEVEEAV-ALESQTIAHMVEDDC---VDNGVPLP--NVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWD 87 (160)
T ss_dssp ------CHH-HHTCTTTC---------------CCT--TSCHHHHHHHHHC-----------------------------
T ss_pred CEEEECHHH-HHHhHHHHHHHHccC---CCCceeCC--cCcHHHHHHHHHHHHHcccCCCcccccccccccccchhhHHH
Confidence 469999999 789999999998753 23456665 999999999999999876
Q ss_pred ---cccCccchHHHHHHHhcccchhhhHHHHHHHHhcCCC---ChhhHHHHHhccchh
Q 008736 208 ---LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPM---TCESALLYLDLPSSV 259 (555)
Q Consensus 208 ---l~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~~l~l---~~~n~~~~l~~a~~~ 259 (555)
+.++. .++.+|+.||++|+|..|.++|++++.. .+ +++++-.++.++.-+
T Consensus 88 ~~Fl~vd~-~~l~eLi~AAnyL~I~~Lldl~c~~vA~-~ikgkt~eeir~~f~I~nd~ 143 (160)
T 2p1m_A 88 ADFMKIDQ-ATLFELILAANYLNIKNLLDLTCQTVAD-MIKGKTPEEIRTTFNIKNDF 143 (160)
T ss_dssp --------------CHHHHHHTTCHHHHHHHHHHHHH-TTTTCCHHHHHHHTTCCCCC
T ss_pred HHHHcCCH-HHHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHcCCCCCC
Confidence 34566 7899999999999999999999999998 57 788888888776554
No 34
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.90 E-value=3.6e-09 Score=106.21 Aligned_cols=107 Identities=12% Similarity=0.036 Sum_probs=80.6
Q ss_pred cceeeecccceeeecccccceeEeccccccceeeccC--CCceeEEEEEECCcEEEEcccCCccccccEEEEE-------
Q 008736 404 ERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLFP--AGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFG------- 474 (555)
Q Consensus 404 ~~~~~~~~~~~ve~ydp~~~~w~~~d~~~~~W~~l~p--~~R~~~~~~vl~g~lYviGG~~~~~~~rs~~~y~------- 474 (555)
+.+|+.++... ...+....||+.++.|..+.+ .+|.+|+++++++++|++||..+....+.+++||
T Consensus 16 ~~i~v~GG~~~-----~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 90 (302)
T 2xn4_A 16 KLMVVVGGQAP-----KAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWT 90 (302)
T ss_dssp EEEEEECCBSS-----SBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEE
T ss_pred CEEEEECCCCC-----CCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCcee
Confidence 45777666321 123445566777777777654 7899999999999999999987655667788887
Q ss_pred ----------------------eeecccCCCCcceeeccccceEecC---CCceecCCCCceeeccceeecc
Q 008736 475 ----------------------LFLGMQEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGY 521 (555)
Q Consensus 475 ----------------------~~gG~~~~~~l~s~V~~~~~ErYdp---~W~~va~m~~~~~~~g~~~~g~ 521 (555)
++||.++...++.+ |+||| +|+.+++|+.+|..++++++++
T Consensus 91 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~------~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~ 156 (302)
T 2xn4_A 91 SVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSV------EAYNIKSNEWFHVAPMNTRRSSVGVGVVGG 156 (302)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEE------EEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred eCCCCCccccceEEEEECCEEEEEcCCCCCccCceE------EEEeCCCCeEeecCCCCCcccCceEEEECC
Confidence 46787766666775 99999 9999999999999887765543
No 35
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.89 E-value=3.1e-09 Score=106.50 Aligned_cols=87 Identities=14% Similarity=0.112 Sum_probs=69.3
Q ss_pred ccccccceeeccC--CCceeEEEEEECCcEEEEcccCCccccccEEEEE-----------------------------ee
Q 008736 428 LDLKREECAHLFP--AGRIYSQAFHLGGQGFFLSAHCNMDQQSSFHCFG-----------------------------LF 476 (555)
Q Consensus 428 ~d~~~~~W~~l~p--~~R~~~~~~vl~g~lYviGG~~~~~~~rs~~~y~-----------------------------~~ 476 (555)
||+.+++|..+.+ .+|..|++++++++||++||.++....+++++|| ++
T Consensus 180 ~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~ 259 (301)
T 2vpj_A 180 YDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAI 259 (301)
T ss_dssp EETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEE
T ss_pred EeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEE
Confidence 7888888888865 7788889999999999999987655567778887 45
Q ss_pred ecccCCCCcceeeccccceEecC---CCceecCCCCceeeccceeec
Q 008736 477 LGMQEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVG 520 (555)
Q Consensus 477 gG~~~~~~l~s~V~~~~~ErYdp---~W~~va~m~~~~~~~g~~~~g 520 (555)
||.++...+..+ ++||| +|+.+++|+.+|..+++++++
T Consensus 260 GG~~~~~~~~~v------~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 260 AGYDGNSLLSSI------ECYDPIIDSWEVVTSMGTQRCDAGVCVLR 300 (301)
T ss_dssp CCBCSSSBEEEE------EEEETTTTEEEEEEEEEEEEESCEEEEEE
T ss_pred cCcCCCcccccE------EEEcCCCCeEEEcCCCCcccccceEEEeC
Confidence 676665555664 99999 899999999999888887764
No 36
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.89 E-value=4.6e-09 Score=106.39 Aligned_cols=93 Identities=14% Similarity=0.092 Sum_probs=73.4
Q ss_pred ceeEeccccccceeeccC--CCceeEEEEEECCcEEEEcccC--CccccccEEEEE------------------------
Q 008736 423 QCVVYLDLKREECAHLFP--AGRIYSQAFHLGGQGFFLSAHC--NMDQQSSFHCFG------------------------ 474 (555)
Q Consensus 423 ~~w~~~d~~~~~W~~l~p--~~R~~~~~~vl~g~lYviGG~~--~~~~~rs~~~y~------------------------ 474 (555)
+.+..||+.+++|..+.+ .+|.+|++++++|++|++||.. +....+++++||
T Consensus 78 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 157 (318)
T 2woz_A 78 SYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISH 157 (318)
T ss_dssp BEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEE
T ss_pred ccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEE
Confidence 346678888888888865 7899999999999999999985 344567788887
Q ss_pred -----eeecccCCC-CcceeeccccceEecC---CCceecCCCCceeeccceeecc
Q 008736 475 -----LFLGMQEKG-SVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGY 521 (555)
Q Consensus 475 -----~~gG~~~~~-~l~s~V~~~~~ErYdp---~W~~va~m~~~~~~~g~~~~g~ 521 (555)
++||.+..+ .++. | ++||| +|+.+++|+.+|..++++++++
T Consensus 158 ~~~iyv~GG~~~~~~~~~~-~-----~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 207 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNR-V-----FIYNPKKGDWKDLAPMKTPRSMFGVAIHKG 207 (318)
T ss_dssp TTEEEEECCEESSSCBCCC-E-----EEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred CCEEEEEcCCCCCCCccce-E-----EEEcCCCCEEEECCCCCCCcccceEEEECC
Confidence 467765433 3455 4 99999 8999999999999888776554
No 37
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.81 E-value=9.5e-10 Score=124.13 Aligned_cols=175 Identities=12% Similarity=0.052 Sum_probs=110.9
Q ss_pred HHhhcCCChHHHHHHHHHHhhccccCCCCCHHHHhhhccCCCCC--Ch---HHHHHHHHHHhhhccCcccchhhhhhccc
Q 008736 322 WARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFD--PE---LASKVVLESLFFKAETPYRQRALAAEEAN 396 (555)
Q Consensus 322 Wi~~~~~~~~~R~~~l~~~Ll~~VRf~lls~~~L~~~~~~~~l~--~~---~~~~~l~eAl~~~~~~p~~q~~~~~~~t~ 396 (555)
|+.++ ...|...+ +.|++.+||++|...++.......... .+ .|.++... .-.. ....+ ....+.
T Consensus 315 ~~~~~---e~~R~~~l-E~ldE~e~~~l~~~hY~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~-~~~~~~-- 384 (695)
T 2zwa_A 315 SADEA---TKKELLKV-EPFDELEEFHLFCHHYVLCHATNYKEFAFTQGFLFDRSISEI--NLTV-DEDYQ-LLECEC-- 384 (695)
T ss_dssp HSCHH---HHHHHHHH-SCCCCHHHHHHHHHTEEEEEEESCTTCCCCTTTCCCC----C--CCEE-CSSEE-EEECCC--
T ss_pred hCCHH---HHHHHHhc-cccchHHHHHHhhccEEEEEEecCCccccCcccCCCCccccc--cCCC-CCcee-EeccCC--
Confidence 99887 66777888 889999999999888887766554432 12 22222100 0000 00000 000111
Q ss_pred ccCcccc------cceeeecccceeeecccccceeEeccccccceeecc--------CCCceeEEEEEE--CCcEEEEcc
Q 008736 397 STYRRFV------ERAYKYRPVKVVEFELPRQQCVVYLDLKREECAHLF--------PAGRIYSQAFHL--GGQGFFLSA 460 (555)
Q Consensus 397 ~~pR~~~------~~~~~~~~~~~ve~ydp~~~~w~~~d~~~~~W~~l~--------p~~R~~~~~~vl--~g~lYviGG 460 (555)
..+|++. +.+|+.++... ...+....||+.+++|..+. |.+|.+|+++++ +|++|++||
T Consensus 385 ~p~rr~g~~~~~~~~iyv~GG~~~-----~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG 459 (695)
T 2zwa_A 385 PINRKFGDVDVAGNDVFYMGGSNP-----YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGG 459 (695)
T ss_dssp TTCCBSCEEEECSSCEEEECCBSS-----SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECC
T ss_pred CCCCceeEEEEECCEEEEECCCCC-----CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcC
Confidence 1134433 24666666432 22344556777777777776 478999999999 999999999
Q ss_pred cCCcc-ccccEEEEE------------------------------eeecccCCCCcceeeccccceEecC---CCceecC
Q 008736 461 HCNMD-QQSSFHCFG------------------------------LFLGMQEKGSVSFAVDYEFAARIKP---TEEYVSK 506 (555)
Q Consensus 461 ~~~~~-~~rs~~~y~------------------------------~~gG~~~~~~l~s~V~~~~~ErYdp---~W~~va~ 506 (555)
.++.. ..+++++|| ++||.++.+ . | ++||| +|+.+++
T Consensus 460 ~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~-v-----~~yd~~t~~W~~~~~ 530 (695)
T 2zwa_A 460 RKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP---A-M-----LLYNVTEEIFKDVTP 530 (695)
T ss_dssp BSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC---S-E-----EEEETTTTEEEECCC
T ss_pred CCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC---C-E-----EEEECCCCceEEccC
Confidence 87643 567788887 356655444 4 4 99999 9999997
Q ss_pred ---CCCceeeccceeec
Q 008736 507 ---YKGNYTFTGGKAVG 520 (555)
Q Consensus 507 ---m~~~~~~~g~~~~g 520 (555)
|+.+|..+++++++
T Consensus 531 ~g~~p~~r~~~~a~v~~ 547 (695)
T 2zwa_A 531 KDEFFQNSLVSAGLEFD 547 (695)
T ss_dssp SSGGGGSCCBSCEEEEE
T ss_pred CCCCCCcccceeEEEEe
Confidence 89899888755544
No 38
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.78 E-value=1.4e-08 Score=102.82 Aligned_cols=92 Identities=9% Similarity=0.060 Sum_probs=72.4
Q ss_pred eeEeccccccceeeccC--CCceeEEEEEECCcEEEEcccCC-ccccccEEEEE--------------------------
Q 008736 424 CVVYLDLKREECAHLFP--AGRIYSQAFHLGGQGFFLSAHCN-MDQQSSFHCFG-------------------------- 474 (555)
Q Consensus 424 ~w~~~d~~~~~W~~l~p--~~R~~~~~~vl~g~lYviGG~~~-~~~~rs~~~y~-------------------------- 474 (555)
....||+.+++|..+.+ .+|..|++++++|+||++||... ....+.+++||
T Consensus 128 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 207 (318)
T 2woz_A 128 SVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKG 207 (318)
T ss_dssp EEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred eEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECC
Confidence 34457788888888765 78999999999999999999743 33467788887
Q ss_pred ---eeecccCCCCcceeeccccceEecC---CCceecCCCCceeeccceeecc
Q 008736 475 ---LFLGMQEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGY 521 (555)
Q Consensus 475 ---~~gG~~~~~~l~s~V~~~~~ErYdp---~W~~va~m~~~~~~~g~~~~g~ 521 (555)
++||.++.+.++.+ |+||| +|+.+++|+.+|..++++++++
T Consensus 208 ~iyv~GG~~~~~~~~~~------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 254 (318)
T 2woz_A 208 KIVIAGGVTEDGLSASV------EAFDLKTNKWEVMTEFPQERSSISLVSLAG 254 (318)
T ss_dssp EEEEEEEEETTEEEEEE------EEEETTTCCEEECCCCSSCCBSCEEEEETT
T ss_pred EEEEEcCcCCCCccceE------EEEECCCCeEEECCCCCCcccceEEEEECC
Confidence 46777766556664 99999 9999999999999887665543
No 39
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.28 E-value=9.3e-07 Score=90.60 Aligned_cols=51 Identities=12% Similarity=0.111 Sum_probs=37.7
Q ss_pred eeEecccc--ccceeeccC---CCceeEEEEEECCcEEEEccc-C----CccccccEEEEE
Q 008736 424 CVVYLDLK--REECAHLFP---AGRIYSQAFHLGGQGFFLSAH-C----NMDQQSSFHCFG 474 (555)
Q Consensus 424 ~w~~~d~~--~~~W~~l~p---~~R~~~~~~vl~g~lYviGG~-~----~~~~~rs~~~y~ 474 (555)
.+..||+. +++|..+++ .+|.+|++++++|+||++||. + +....+.+++||
T Consensus 32 ~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd 92 (357)
T 2uvk_A 32 AWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYN 92 (357)
T ss_dssp CEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEE
T ss_pred eEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEe
Confidence 34456665 477877764 579999999999999999998 3 123456677776
No 40
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.24 E-value=2e-06 Score=72.06 Aligned_cols=78 Identities=19% Similarity=0.271 Sum_probs=64.1
Q ss_pred eEEEEE---eEEEeehhhccccCHHHHHhhcCCCCCCCccEEEEecCCCCHHHHHHHHHHHhcCc--------------c
Q 008736 146 STVLRV---KTVHISSPILAAKSPFFYKLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSST--------------L 208 (555)
Q Consensus 146 DV~l~v---~~f~aHr~ILaa~S~yF~amf~~~~~Es~~~~I~L~~~~v~~~~f~~lL~fiYtg~--------------l 208 (555)
-|+|.. ..|.+++.+ |..|.+++.||..++ |.....|.|+ +++..+++.+++|+|.-. .
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp--~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w 80 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELK--QFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEF 80 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEET--TSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecC--CcCHHHHHHHHHHHHHhcccCCCccccccCCCc
Confidence 356665 479999997 789999999999876 6666788887 999999999999998643 1
Q ss_pred ccCccchHHHHHHHhcccch
Q 008736 209 STTTPTALLDVLMAADKFEV 228 (555)
Q Consensus 209 ~i~~~~~v~~lL~aAd~l~l 228 (555)
.++. ..+.+|+.||++|++
T Consensus 81 ~vd~-~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 81 EIPT-EMSLELLLAADYLSI 99 (99)
T ss_dssp CCCH-HHHHHHHHHHHHHCC
T ss_pred cCCH-HHHHHHHHHHHHhCc
Confidence 3444 789999999999975
No 41
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.19 E-value=2.2e-06 Score=87.73 Aligned_cols=94 Identities=5% Similarity=-0.062 Sum_probs=63.1
Q ss_pred ceeEeccccccceeeccC--CCce-eEEEEEECCcEEEEcccCCc-cccccEEEEE------------------------
Q 008736 423 QCVVYLDLKREECAHLFP--AGRI-YSQAFHLGGQGFFLSAHCNM-DQQSSFHCFG------------------------ 474 (555)
Q Consensus 423 ~~w~~~d~~~~~W~~l~p--~~R~-~~~~~vl~g~lYviGG~~~~-~~~rs~~~y~------------------------ 474 (555)
+....||+.+++|..+.+ .+|. .+++++++++||++||.++. .....+++|+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~ 247 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGF 247 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCE
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccce
Confidence 455566777777776654 3444 49999999999999997432 1233344443
Q ss_pred ---------eeecccCCC-----------------CcceeeccccceEecC---CCceecCCCCceeeccceeeccc
Q 008736 475 ---------LFLGMQEKG-----------------SVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYR 522 (555)
Q Consensus 475 ---------~~gG~~~~~-----------------~l~s~V~~~~~ErYdp---~W~~va~m~~~~~~~g~~~~g~~ 522 (555)
++||.+..+ .+.. | |+||| +|+.+++|+.+|..+++++++++
T Consensus 248 ~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~-~-----~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~ 318 (357)
T 2uvk_A 248 AGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYS-T-----DIHLWHNGKWDKSGELSQGRAYGVSLPWNNS 318 (357)
T ss_dssp EEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEEC-C-----EEEECC---CEEEEECSSCCBSSEEEEETTE
T ss_pred EEEECCEEEEEcCccccCCcccccccceeccccccceee-E-----EEEecCCCceeeCCCCCCCcccceeEEeCCE
Confidence 456654221 1234 3 99999 99999999999998877766654
No 42
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.15 E-value=2.5e-06 Score=71.11 Aligned_cols=78 Identities=19% Similarity=0.225 Sum_probs=59.0
Q ss_pred EEEEE---eEEEeehhhccccCHHHHHhhcC-CC-CCCCccEEEEecCCCCHHHHHHHHHHHhcCc-----------ccc
Q 008736 147 TVLRV---KTVHISSPILAAKSPFFYKLFSN-GM-RESEQRYVTLRIHASEEAALMELLNFMYSST-----------LST 210 (555)
Q Consensus 147 V~l~v---~~f~aHr~ILaa~S~yF~amf~~-~~-~Es~~~~I~L~~~~v~~~~f~~lL~fiYtg~-----------l~i 210 (555)
|+|.. ..|.+++.+ |..|++++.||.. +. .|+....|.|+ +++..+++.+++|+|.-. -.+
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~--~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~v 79 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFR--EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPI 79 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECS--SCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCC--CCCHHHHHHHHHHHHHccccCCCcccCCCccc
Confidence 44554 479999997 7899999999986 33 56666778887 999999999999998643 235
Q ss_pred CccchHHHHHHHhcccch
Q 008736 211 TTPTALLDVLMAADKFEV 228 (555)
Q Consensus 211 ~~~~~v~~lL~aAd~l~l 228 (555)
+. ..+.+|+.||++|++
T Consensus 80 d~-~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 80 AP-EIALELLMAANFLDC 96 (96)
T ss_dssp CT-TTHHHHHHHHHHHTC
T ss_pred CH-HHHHHHHHHHHHhCc
Confidence 55 789999999999975
No 43
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.14 E-value=7.6e-06 Score=75.41 Aligned_cols=109 Identities=10% Similarity=0.214 Sum_probs=80.4
Q ss_pred eEEEEE---eEEEeehhhccccCHHHHHhhcCCCC----CCCccEEEEecCCCCHHHHHHHHHHHhcCc-----------
Q 008736 146 STVLRV---KTVHISSPILAAKSPFFYKLFSNGMR----ESEQRYVTLRIHASEEAALMELLNFMYSST----------- 207 (555)
Q Consensus 146 DV~l~v---~~f~aHr~ILaa~S~yF~amf~~~~~----Es~~~~I~L~~~~v~~~~f~~lL~fiYtg~----------- 207 (555)
.|+|.. ..|.+++.+ |..|.+++.|+...-. +.....|.|+ +++..+|+.|++|++.-.
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~Iplp--nV~s~iL~kVieyc~~h~~~~~~~~~~~~ 84 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVP--NVRSSVLQKVIEWAEHHRDSNFPDEDDDD 84 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECT--TCCHHHHHHHHHHHHHTTTCCCCC-----
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeC--CCCHHHHHHHHHHHHHcccCCCccccccc
Confidence 466665 479999998 6789999999976322 1223567776 999999999999997532
Q ss_pred --------------cccCccchHHHHHHHhcccchhhhHHHHHHHHhcC--CCChhhHHHHHhccch
Q 008736 208 --------------LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNL--PMTCESALLYLDLPSS 258 (555)
Q Consensus 208 --------------l~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~~l--~l~~~n~~~~l~~a~~ 258 (555)
+.++. ..+.+|+.||++|+|..|.+.|++.+..+ ..+++..-.++.+..-
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~-~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I~nd 150 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQ-EMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVND 150 (169)
T ss_dssp ---CCCCCHHHHHHTCSCH-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTCCCC
T ss_pred ccccccccHHHHHHHcCCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCC
Confidence 23444 68999999999999999999999998552 4566666666665543
No 44
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.04 E-value=2.2e-05 Score=66.65 Aligned_cols=93 Identities=17% Similarity=0.243 Sum_probs=74.7
Q ss_pred eEEEEE--eEEEeehhhccccC-HHHHHhhcCCCC----CCCccEEEEecCCCCHHHHHHHHHHHhcCccccCccchHHH
Q 008736 146 STVLRV--KTVHISSPILAAKS-PFFYKLFSNGMR----ESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLD 218 (555)
Q Consensus 146 DV~l~v--~~f~aHr~ILaa~S-~yF~amf~~~~~----Es~~~~I~L~~~~v~~~~f~~lL~fiYtg~l~i~~~~~v~~ 218 (555)
-|+|.| ..|...+..|+... .+|.+||.+... .....++-+ +-++..|+.+|+|+.+|++.+...-....
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi---DRdp~~F~~IL~~lr~g~l~~p~~~~~~~ 83 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI---DRDPTYFGPVLNYLRHGKLVINKDLAEEG 83 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE---CSCHHHHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe---cCChHHHHHHHHHhCCCeeCCCCCCCHHH
Confidence 456777 35999999998875 478999876421 123456777 68999999999999999998765345688
Q ss_pred HHHHhcccchhhhHHHHHHHHhc
Q 008736 219 VLMAADKFEVASCMRYCSRLLRN 241 (555)
Q Consensus 219 lL~aAd~l~l~~L~~~C~~~L~~ 241 (555)
++.-|.+|+|+.|++.|.+.|.+
T Consensus 84 l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 84 VLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHhc
Confidence 99999999999999999998764
No 45
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.02 E-value=7e-06 Score=92.46 Aligned_cols=90 Identities=12% Similarity=-0.043 Sum_probs=65.4
Q ss_pred cceeEeccccccceeeccC--CCceeEEEEEE-CCcEEEEcccCCccccccEEEEE------------------------
Q 008736 422 QQCVVYLDLKREECAHLFP--AGRIYSQAFHL-GGQGFFLSAHCNMDQQSSFHCFG------------------------ 474 (555)
Q Consensus 422 ~~~w~~~d~~~~~W~~l~p--~~R~~~~~~vl-~g~lYviGG~~~~~~~rs~~~y~------------------------ 474 (555)
.+.+..||+.+++|..+.+ .+|.+|+++++ +|++|++||.++.. .+++||
T Consensus 467 ~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a 543 (695)
T 2zwa_A 467 LSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPKDEFFQNSLVSAG 543 (695)
T ss_dssp CCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCCSSGGGGSCCBSCE
T ss_pred cccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccCCCCCCCcccceeE
Confidence 3456668888888888865 88999999997 99999999985422 344443
Q ss_pred -----------eeecccCC--CCcceeeccccceEecC---C------CceecCC-CCceeeccceeec
Q 008736 475 -----------LFLGMQEK--GSVSFAVDYEFAARIKP---T------EEYVSKY-KGNYTFTGGKAVG 520 (555)
Q Consensus 475 -----------~~gG~~~~--~~l~s~V~~~~~ErYdp---~------W~~va~m-~~~~~~~g~~~~g 520 (555)
++||.+.. ..++. | ++||| + |+.+++| +.+|..+++++++
T Consensus 544 ~v~~~~~~~iyv~GG~~~~~~~~~~~-v-----~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~ 606 (695)
T 2zwa_A 544 LEFDPVSKQGIILGGGFMDQTTVSDK-A-----IIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYIT 606 (695)
T ss_dssp EEEETTTTEEEEECCBCTTSSCBCCE-E-----EEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEE
T ss_pred EEEeCCCCEEEEECCcCCCCCeeeCc-E-----EEEEccCCccccceEEEEcCCCCCCCcccceEEEeC
Confidence 45666433 23455 4 99999 6 8999887 4788887777666
No 46
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.84 E-value=1.2e-05 Score=89.83 Aligned_cols=86 Identities=6% Similarity=-0.110 Sum_probs=64.9
Q ss_pred eeEeccccccceeeccCCCceeEEEEEE--CCcEEEEcccCCcc------ccccEEEEE---------------------
Q 008736 424 CVVYLDLKREECAHLFPAGRIYSQAFHL--GGQGFFLSAHCNMD------QQSSFHCFG--------------------- 474 (555)
Q Consensus 424 ~w~~~d~~~~~W~~l~p~~R~~~~~~vl--~g~lYviGG~~~~~------~~rs~~~y~--------------------- 474 (555)
.|..|||..++|..++|.++..++++++ +|++|++||.++.. ....+++||
T Consensus 167 ~~~~~dp~~~~W~~~~~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~ 246 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCP 246 (656)
T ss_dssp CCCCCCTTSCEEEEEEECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSC
T ss_pred ccccCCCCCCeeeeeccCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccc
Confidence 4788999999999998888888888888 99999999975321 123466665
Q ss_pred -----------eeecccCCCCcceeeccccceEecC---CCceecCCCCceeeccceee
Q 008736 475 -----------LFLGMQEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAV 519 (555)
Q Consensus 475 -----------~~gG~~~~~~l~s~V~~~~~ErYdp---~W~~va~m~~~~~~~g~~~~ 519 (555)
++||.+. .. | ++||| +|+.+++|+.+|..++++++
T Consensus 247 ~~~~~~~g~lyv~GG~~~----~~-v-----~~yd~~t~~W~~~~~~~~~R~~~s~~~~ 295 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDA----KK-T-----SLYDSSSDSWIPGPDMQVARGYQSSATM 295 (656)
T ss_dssp EEEECTTSCEEEECSSST----TC-E-----EEEEGGGTEEEECCCCSSCCSSCEEEEC
T ss_pred cccCCCCCCEEEeCCCCC----Cc-e-----EEecCcCCceeECCCCCccccccceEEe
Confidence 2333322 13 4 99999 89999999999998876655
No 47
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.51 E-value=8.3e-05 Score=63.53 Aligned_cols=79 Identities=18% Similarity=0.193 Sum_probs=58.4
Q ss_pred eEEEEE---eEEEeehhhccccCHHHHHhhcC--CCCCCCccEEEEecCCCCHHHHHHHHHHHhcCc-----------cc
Q 008736 146 STVLRV---KTVHISSPILAAKSPFFYKLFSN--GMRESEQRYVTLRIHASEEAALMELLNFMYSST-----------LS 209 (555)
Q Consensus 146 DV~l~v---~~f~aHr~ILaa~S~yF~amf~~--~~~Es~~~~I~L~~~~v~~~~f~~lL~fiYtg~-----------l~ 209 (555)
-|+|.. ..|.+++.+ |..|..++.|+.. .+.|+....|.|+ +++..+++.+++|++.-. ..
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~~~~~Iplp--nV~s~iL~kVieyc~~h~~~~~~~~~i~~w~ 94 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFR--EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFP 94 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC--------CEEECS--SCCHHHHHHHHHHHHHHHHHSSCSSCCCCCC
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCcccccCCceeCC--CCCHHHHHHHHHHHHHhhhccCCcCCCCCcc
Confidence 456665 479999995 6789999999985 2345555677777 999999999999997532 13
Q ss_pred cCccchHHHHHHHhcccch
Q 008736 210 TTTPTALLDVLMAADKFEV 228 (555)
Q Consensus 210 i~~~~~v~~lL~aAd~l~l 228 (555)
++. .++.+|+.||++|+|
T Consensus 95 vd~-~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 95 IAP-EIALELLMAANFLDC 112 (112)
T ss_dssp CCH-HHHHHHHHHHHHHTC
T ss_pred cCH-HHHHHHHHHHHHhCc
Confidence 455 789999999999975
No 48
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.40 E-value=0.00014 Score=81.01 Aligned_cols=78 Identities=9% Similarity=-0.018 Sum_probs=59.7
Q ss_pred eeEeccccccceeecc----CCCceeEEEEEE-CCcEEEEcccCCccccccEEEEEeeecccCCCCcceeeccccceEec
Q 008736 424 CVVYLDLKREECAHLF----PAGRIYSQAFHL-GGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARIK 498 (555)
Q Consensus 424 ~w~~~d~~~~~W~~l~----p~~R~~~~~~vl-~g~lYviGG~~~~~~~rs~~~y~~~gG~~~~~~l~s~V~~~~~ErYd 498 (555)
.+..||+.++.|..+. |.+|..++++++ +|++|++||.+... +.++...+..+ |+||
T Consensus 433 ~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~------------~~~~~~~~~~v------~~yd 494 (656)
T 1k3i_A 433 IITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI------------PFEDSTPVFTP------EIYV 494 (656)
T ss_dssp EEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCC------------TTCCCSBCCCC------EEEE
T ss_pred EEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCc------------CcCCCCcccce------EEEc
Confidence 4556777777887765 488999998888 99999999974321 12233345564 9999
Q ss_pred C---CCceecCCCCceeeccceee
Q 008736 499 P---TEEYVSKYKGNYTFTGGKAV 519 (555)
Q Consensus 499 p---~W~~va~m~~~~~~~g~~~~ 519 (555)
| +|+.+++|+.+|..++++++
T Consensus 495 p~t~~W~~~~~~~~~R~~hs~a~l 518 (656)
T 1k3i_A 495 PEQDTFYKQNPNSIVRVYHSISLL 518 (656)
T ss_dssp GGGTEEEECCCCSSCCCTTEEEEE
T ss_pred CCCCceeecCCCCCccccccHhhc
Confidence 9 99999999999999987766
No 49
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=96.82 E-value=0.0047 Score=57.85 Aligned_cols=94 Identities=17% Similarity=0.233 Sum_probs=73.9
Q ss_pred eeEEEEE--eEEEeehhhccccC-HHHHHhhcCCC--C--CCCccEEEEecCCCCHHHHHHHHHHHhcCccccCccchHH
Q 008736 145 LSTVLRV--KTVHISSPILAAKS-PFFYKLFSNGM--R--ESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALL 217 (555)
Q Consensus 145 ~DV~l~v--~~f~aHr~ILaa~S-~yF~amf~~~~--~--Es~~~~I~L~~~~v~~~~f~~lL~fiYtg~l~i~~~~~v~ 217 (555)
--|+|.| ..|...+..|.... .+|.+||.+.. . .....++-| |-++..|+.||+|+-+|++.+...-...
T Consensus 12 ~~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI---DRDP~~F~~ILnyLRtG~L~lP~~~~~~ 88 (202)
T 3drx_A 12 KWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI---DRDPTYFGPVLNYLRHGKLVINKDLAEE 88 (202)
T ss_dssp CEEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE---CSCSTTHHHHHHHHHHSCCCCCTTSCHH
T ss_pred CEEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe---cCChHHHHHHHHHhcCCccCCCCCCCHH
Confidence 3556777 35999999998764 38899987642 1 113456776 6899999999999999999876634567
Q ss_pred HHHHHhcccchhhhHHHHHHHHhc
Q 008736 218 DVLMAADKFEVASCMRYCSRLLRN 241 (555)
Q Consensus 218 ~lL~aAd~l~l~~L~~~C~~~L~~ 241 (555)
.++.-|.+|+|+.|.+.|.+.|.+
T Consensus 89 ~l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 89 GVLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCcHHHHHHHHHHHHH
Confidence 899999999999999999999865
No 50
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=94.57 E-value=0.022 Score=48.65 Aligned_cols=93 Identities=10% Similarity=0.046 Sum_probs=66.8
Q ss_pred eEEEEE--eEEEeehhhccccCH-HHHHhhcCCC-CCCCccEEEEecCCCCHHHHHHHHHHHhcCccccCccchHHHHHH
Q 008736 146 STVLRV--KTVHISSPILAAKSP-FFYKLFSNGM-RESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLM 221 (555)
Q Consensus 146 DV~l~v--~~f~aHr~ILaa~S~-yF~amf~~~~-~Es~~~~I~L~~~~v~~~~f~~lL~fiYtg~l~i~~~~~v~~lL~ 221 (555)
-|+|.| ..|...+..|..... .+.+||.+.. .....+++-| +-++..|..||+|+-+|++.+...-.+..++.
T Consensus 6 ~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi---DRdp~~F~~ILnylR~G~l~~p~~~~~~~~~~ 82 (115)
T 3kvt_A 6 RVIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF---DRHPGVFAQIINYYRSGKLHYPTDVCGPLFEE 82 (115)
T ss_dssp EEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE---CSCTTTHHHHHHHHHHSCBCCCSSSCHHHHHH
T ss_pred EEEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE---ecChHHHHHHHHHhcCCCCCCCCcccHHHHHH
Confidence 467777 358899999987643 4555655421 1234567777 68999999999999999998766346789999
Q ss_pred HhcccchhhhH--HHHHHHHhc
Q 008736 222 AADKFEVASCM--RYCSRLLRN 241 (555)
Q Consensus 222 aAd~l~l~~L~--~~C~~~L~~ 241 (555)
-|.+|+|+... ..|..-+.+
T Consensus 83 Ea~fy~i~~~~l~~CC~~~~~~ 104 (115)
T 3kvt_A 83 ELEFWGLDSNQVEPCCWMTYTA 104 (115)
T ss_dssp HHHHHTCCGGGBCGGGSHHHHS
T ss_pred HHHHhCCChHHHHHHHHHHHHh
Confidence 99999999865 235555444
No 51
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=94.04 E-value=0.068 Score=46.16 Aligned_cols=90 Identities=11% Similarity=0.105 Sum_probs=63.0
Q ss_pred eeEEEEEe--EEEeehhhccccCHHHHHhhcCC----CCCCCccEEEEecCCCCHHHHHHHHHHHhcCccccCccchHHH
Q 008736 145 LSTVLRVK--TVHISSPILAAKSPFFYKLFSNG----MRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLD 218 (555)
Q Consensus 145 ~DV~l~v~--~f~aHr~ILaa~S~yF~amf~~~----~~Es~~~~I~L~~~~v~~~~f~~lL~fiYtg~l~i~~~~~v~~ 218 (555)
--|+|.|+ .|...+..|..... .||... ......+++-| +=++..|+.||+|+-+|++.+.....+..
T Consensus 13 ~~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi---DRdp~~F~~ILnflR~G~l~~p~~~~~~~ 86 (124)
T 1s1g_A 13 ELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECISA 86 (124)
T ss_dssp CEEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE---CSCHHHHHHHHHHHHHSCBCCCTTSCHHH
T ss_pred CEEEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE---cCChHHHHHHHHHHhcCCCCCCCCcCHHH
Confidence 45667773 58888888876532 233221 11223456777 67999999999999999998765346889
Q ss_pred HHHHhcccchhhhH--HHHHHHHh
Q 008736 219 VLMAADKFEVASCM--RYCSRLLR 240 (555)
Q Consensus 219 lL~aAd~l~l~~L~--~~C~~~L~ 240 (555)
++.-|++|+|+.+. ..|..-+.
T Consensus 87 l~~Ea~fy~i~~l~l~~cC~~~~~ 110 (124)
T 1s1g_A 87 YDDELAFYGILPEIIGDCCYEEYK 110 (124)
T ss_dssp HHHHHHHTTCCGGGBCHHHHHHHH
T ss_pred HHHHHHHcCCChHHHHHHHHHHHH
Confidence 99999999999874 44444443
No 52
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=92.50 E-value=0.052 Score=45.45 Aligned_cols=80 Identities=14% Similarity=0.143 Sum_probs=56.8
Q ss_pred EEEEE--eEEEeehhhccccCHHHHHhhcCC----CCCCCccEEEEecCCCCHHHHHHHHHHHhcCccccCccchHHHHH
Q 008736 147 TVLRV--KTVHISSPILAAKSPFFYKLFSNG----MRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVL 220 (555)
Q Consensus 147 V~l~v--~~f~aHr~ILaa~S~yF~amf~~~----~~Es~~~~I~L~~~~v~~~~f~~lL~fiYtg~l~i~~~~~v~~lL 220 (555)
|+|.| ..|...+..|..... .||... ......+++-| +=++..|+.||+|+-+|++.+.....+..++
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi---DRdp~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF---DRDPDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE---CSCTTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE---eCCcHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 56677 358888888865432 233321 01123456777 6799999999999999999876534578999
Q ss_pred HHhcccchhhhH
Q 008736 221 MAADKFEVASCM 232 (555)
Q Consensus 221 ~aAd~l~l~~L~ 232 (555)
.-|++|+|+.+.
T Consensus 76 ~Ea~fy~i~~l~ 87 (105)
T 1nn7_A 76 EELAFFGLIPEI 87 (105)
T ss_dssp HHHHHHTCCSCC
T ss_pred HHHHHcCCCHHH
Confidence 999999999863
No 53
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=91.80 E-value=0.15 Score=44.95 Aligned_cols=82 Identities=12% Similarity=0.088 Sum_probs=59.9
Q ss_pred CeeEEEEEe--EEEeehhhccccCHHHHHhhcCC----CCCCCccEEEEecCCCCHHHHHHHHHHHhcCccccCccchHH
Q 008736 144 DLSTVLRVK--TVHISSPILAAKSPFFYKLFSNG----MRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALL 217 (555)
Q Consensus 144 ~~DV~l~v~--~f~aHr~ILaa~S~yF~amf~~~----~~Es~~~~I~L~~~~v~~~~f~~lL~fiYtg~l~i~~~~~v~ 217 (555)
.--|+|.|+ .|...+..|..... .||... ......+++-| +=++..|+.||+|+-+|++.+.....+.
T Consensus 34 ~~~V~LNVGG~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~g~yFi---DRdp~~F~~ILnflR~G~l~~p~~~~~~ 107 (140)
T 2nz0_B 34 DELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECIS 107 (140)
T ss_dssp CCEEEEEETTEEEEEEHHHHHTCTT---STTTSGGGGGSEETTTTEEEE---CSCHHHHHHHHHHHHHSSBCCCTTSCHH
T ss_pred CCEEEEEECCEEEEeeHHHHhcCCC---eeecccCCcccccCCCCeEEE---eCCcHHHHHHHHHHhcCCcCCCCCcCHH
Confidence 345677773 58888888875432 233331 11123467777 6799999999999999999876534588
Q ss_pred HHHHHhcccchhhh
Q 008736 218 DVLMAADKFEVASC 231 (555)
Q Consensus 218 ~lL~aAd~l~l~~L 231 (555)
.++.-|++|+|+.+
T Consensus 108 ~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 108 AYDDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHHHTCCGG
T ss_pred HHHHHHHHcCCChH
Confidence 99999999999987
No 54
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=90.60 E-value=0.18 Score=41.69 Aligned_cols=83 Identities=11% Similarity=0.047 Sum_probs=58.1
Q ss_pred EEEEE--eEEEeehhhccccCH-HHHHhhcC-CCCCCCccEEEEecCCCCHHHHHHHHHHHhc-CccccCccchHHHHHH
Q 008736 147 TVLRV--KTVHISSPILAAKSP-FFYKLFSN-GMRESEQRYVTLRIHASEEAALMELLNFMYS-STLSTTTPTALLDVLM 221 (555)
Q Consensus 147 V~l~v--~~f~aHr~ILaa~S~-yF~amf~~-~~~Es~~~~I~L~~~~v~~~~f~~lL~fiYt-g~l~i~~~~~v~~lL~ 221 (555)
|+|.| ..|...+..|..... .+.+|+.. .......+++-+ +-++..|+.||+|+-+ |++.+.....+..++.
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi---DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF---DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSE 79 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE---CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE---cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHH
Confidence 56677 358888888865421 22333321 111124567777 6799999999999999 8998765356789999
Q ss_pred HhcccchhhhH
Q 008736 222 AADKFEVASCM 232 (555)
Q Consensus 222 aAd~l~l~~L~ 232 (555)
-|.+|+|+.+.
T Consensus 80 Ea~fy~i~~~~ 90 (100)
T 1t1d_A 80 EIKFYELGENA 90 (100)
T ss_dssp HHHHTTCCHHH
T ss_pred HHHHcCCCHHH
Confidence 99999998854
No 55
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.45 E-value=3.2 Score=34.14 Aligned_cols=35 Identities=11% Similarity=0.108 Sum_probs=30.9
Q ss_pred cccCccchHHHHHHHhcccchhhhHHHHHHHHhcCCC
Q 008736 208 LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPM 244 (555)
Q Consensus 208 l~i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~~l~l 244 (555)
-.++. +|...++.+|+.|+++.|.+.|.+|+.+ +.
T Consensus 6 ~~L~~-~NCl~i~~~A~~~~~~~L~~~a~~fi~~-nF 40 (105)
T 2eqx_A 6 SGVQV-GNCLQVMWLADRHSDPELYTAAKHCAKT-HL 40 (105)
T ss_dssp CCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-TC
T ss_pred ccCCH-HHHHHHHHHHHHcCCHHHHHHHHHHHHH-HH
Confidence 34666 8999999999999999999999999987 54
No 56
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=64.94 E-value=19 Score=34.74 Aligned_cols=94 Identities=9% Similarity=0.092 Sum_probs=64.4
Q ss_pred cCccchHHHHHHHhcccchhhhHHHHHHHHhcCCC------------ChhhHHHHHhccchhhhhhchHHHHHHHHHHHH
Q 008736 210 TTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPM------------TCESALLYLDLPSSVLMADAVQPLTDTAKQFLA 277 (555)
Q Consensus 210 i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~~l~l------------~~~n~~~~l~~a~~~~~a~~~~~L~~~~~~fi~ 277 (555)
++. +|+..++..|+.|+++.|.+.|.+|+.. +. +.+....++.--... . .+-..+.+++..|+.
T Consensus 139 l~~-~n~~~i~~~A~~~~~~~L~~~~~~~i~~-~f~~v~~~~~f~~L~~~~l~~lL~~d~L~-v-~sE~~vf~av~~W~~ 214 (279)
T 3i3n_A 139 LHL-SNCVAIHSLAHMYTLSQLALKAADMIRR-NFHKVIQDEEFYTLPFHLIRDWLSDLEIT-V-DSEEVLFETVLKWVQ 214 (279)
T ss_dssp CCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-THHHHTTSSGGGGSCHHHHHHHHTCSSCC-C-SCHHHHHHHHHHHHH
T ss_pred CCc-chHHHHHHHHHHcCcHHHHHHHHHHHHH-HHHHHhcCcChhcCCHHHHHHHhcCcCCC-C-CCHHHHHHHHHHHHH
Confidence 566 7999999999999999999999999875 32 333333444321110 0 123578888999986
Q ss_pred HhH-------HHhhccchhhhCCChhhhcccccccccc
Q 008736 278 ARY-------KDISKFQEEVLNLPLAGIEAVLASDDLQ 308 (555)
Q Consensus 278 ~nf-------~~v~~~~~efl~L~~~~L~~LL~sd~L~ 308 (555)
.+. ..+++ .=-|..|+...|..++..+.+-
T Consensus 215 ~~~~~r~~~~~~ll~-~VRf~l~~~~~L~~~v~~~~l~ 251 (279)
T 3i3n_A 215 RNAEERERYFEELFK-LLRLSQMKPTYLTRHVKPERLV 251 (279)
T ss_dssp TTHHHHTTTHHHHHT-TSCGGGSCHHHHHHTTTTSHHH
T ss_pred cCHHHHHHHHHHHHH-hcCCCCCCHHHHHHHhhccchh
Confidence 553 44555 5567778888888888776654
No 57
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=63.25 E-value=4.5 Score=32.89 Aligned_cols=33 Identities=18% Similarity=0.268 Sum_probs=30.5
Q ss_pred CCChhhHHHHHhccchhhhhhchHHHHHHHHHHHHHh
Q 008736 243 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAAR 279 (555)
Q Consensus 243 ~l~~~n~~~~l~~a~~~~~a~~~~~L~~~~~~fi~~n 279 (555)
.++.+|+..++.+|..| .++.|++.|.+|+.++
T Consensus 76 ~~~~~~~~~ll~~A~~~----~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 76 DLEADTVLATLYAAKKY----IVPALAKACVNFLETS 108 (109)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHhh
Confidence 57889999999999999 8999999999999876
No 58
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=52.62 E-value=9 Score=33.81 Aligned_cols=33 Identities=9% Similarity=0.102 Sum_probs=29.8
Q ss_pred cCccchHHHHHHHhcccchhhhHHHHHHHHhcCCC
Q 008736 210 TTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPM 244 (555)
Q Consensus 210 i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~~l~l 244 (555)
++. +|+..++..|+.|+++.|++.|.+|+.+ ++
T Consensus 132 l~~-~n~~~~~~~A~~~~~~~L~~~~~~~i~~-~~ 164 (172)
T 3htm_A 132 LSV-ENAAEILILADLHSADQLKTQAVDFINY-HA 164 (172)
T ss_dssp CCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-TC
T ss_pred CCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH-HH
Confidence 455 7999999999999999999999999987 55
No 59
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=45.48 E-value=19 Score=38.30 Aligned_cols=84 Identities=10% Similarity=0.011 Sum_probs=57.6
Q ss_pred eEEEEE--eEEEeehhhccccCHHH-HHhhcC-CCCCCCccEEEEecCCCCHHHHHHHHHHHhc-CccccCccchHHHHH
Q 008736 146 STVLRV--KTVHISSPILAAKSPFF-YKLFSN-GMRESEQRYVTLRIHASEEAALMELLNFMYS-STLSTTTPTALLDVL 220 (555)
Q Consensus 146 DV~l~v--~~f~aHr~ILaa~S~yF-~amf~~-~~~Es~~~~I~L~~~~v~~~~f~~lL~fiYt-g~l~i~~~~~v~~lL 220 (555)
-|+|.| ..|...+..|.....-+ .+++.. .......+++-+ |=++..|+.+|+|+.| |++.....-....++
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~---DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~ 129 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF---DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFS 129 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE---CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE---cCChHHHHHHHHHHhcCCccccCCcccHHHHH
Confidence 456677 35888888886543211 111110 111234567777 6899999999999999 999876534577889
Q ss_pred HHhcccchhhhH
Q 008736 221 MAADKFEVASCM 232 (555)
Q Consensus 221 ~aAd~l~l~~L~ 232 (555)
+-|.+|+++++.
T Consensus 130 ~E~~f~~i~~~~ 141 (514)
T 2r9r_B 130 EEIRFYELGEEA 141 (514)
T ss_dssp HHHHHTTCCHHH
T ss_pred HHHHhcCCCHHH
Confidence 999999998865
No 60
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=44.63 E-value=13 Score=31.20 Aligned_cols=33 Identities=12% Similarity=0.262 Sum_probs=29.8
Q ss_pred CCChhhHHHHHhccchhhhhhchHHHHHHHHHHHHHh
Q 008736 243 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAAR 279 (555)
Q Consensus 243 ~l~~~n~~~~l~~a~~~~~a~~~~~L~~~~~~fi~~n 279 (555)
.++.+|+..++.+|..+ .++.|++.|.+|+.++
T Consensus 94 ~~~~~~~~~ll~~A~~~----~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 94 NLREGNIMAVMATAMYL----QMEHVVDTCRKFIKAS 126 (127)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHh----CCHHHHHHHHHHHHhc
Confidence 57889999999999999 8999999999999764
No 61
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=40.67 E-value=7.8 Score=33.13 Aligned_cols=38 Identities=11% Similarity=0.048 Sum_probs=29.1
Q ss_pred CCChhhHHHHHhccchhhhhhchHHHHHHHHHHHHHhHHHhh
Q 008736 243 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDIS 284 (555)
Q Consensus 243 ~l~~~n~~~~l~~a~~~~~a~~~~~L~~~~~~fi~~nf~~v~ 284 (555)
.++.+|+..++..|+.+ .++.|++.|.+|+.+++..-.
T Consensus 86 ~i~~~~v~~ll~~A~~l----~i~~L~~~C~~~l~~~l~~~~ 123 (135)
T 2yy9_A 86 ALTSGNRDQVLLAAKEL----RVPEAVELCQSFQPQTSVGQA 123 (135)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHCCC-------
T ss_pred CCCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHHhccCCC
Confidence 57889999999999999 899999999999998876543
No 62
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=40.31 E-value=17 Score=35.70 Aligned_cols=33 Identities=9% Similarity=0.102 Sum_probs=29.8
Q ss_pred cCccchHHHHHHHhcccchhhhHHHHHHHHhcCCC
Q 008736 210 TTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPM 244 (555)
Q Consensus 210 i~~~~~v~~lL~aAd~l~l~~L~~~C~~~L~~l~l 244 (555)
++. +++..+|.+|+.|+++.|++.|.+|+.. ++
T Consensus 272 ~~~-~n~~~~l~~A~~~~~~~L~~~~~~~i~~-~~ 304 (312)
T 3hqi_A 272 LSV-ENAAEILILADLHSADQLKTQAVDFINY-HA 304 (312)
T ss_dssp CCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-TC
T ss_pred CCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH-HH
Confidence 455 7999999999999999999999999988 55
No 63
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=39.99 E-value=20 Score=34.00 Aligned_cols=92 Identities=13% Similarity=0.117 Sum_probs=58.7
Q ss_pred CCChhhHHHHHhccchhhhhhchHHHHHHHHHHHHHhHHHhhccchhhhCCChhhhccccccccccCCCHHHHHHHHHHH
Q 008736 243 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKW 322 (555)
Q Consensus 243 ~l~~~n~~~~l~~a~~~~~a~~~~~L~~~~~~fi~~nf~~v~~~~~efl~L~~~~L~~LL~sd~L~V~sE~~V~~av~~W 322 (555)
.++.+|+..++..|..+ .++.|++.|.+|+..++.. +....++.--+. .+-.++.+.+..+
T Consensus 98 ~i~~~~v~~ll~~A~~l----~i~~l~~~c~~~L~~~l~~-------------~n~~~i~~~A~~--~~~~~L~~~~~~~ 158 (256)
T 3hve_A 98 RLNEDTIQDVVQAADLL----LLTDLKTLCCEFLEGCIAA-------------ENCIGIRDFALH--YCLHHVHYLATEY 158 (256)
T ss_dssp CCC-CCHHHHHHHHHHH----TCHHHHHHHHHHHHHTCCS-------------STTHHHHHHHHH--TTCHHHHHHHHHH
T ss_pred cccHhHHHHHHHHHHHH----ChHHHHHHHHHHHHhhCCH-------------hhHHHHHHHHHH--cCcHHHHHHHHHH
Confidence 57889999999999999 8999999999999865311 111111111111 1223556667777
Q ss_pred HhhcCCChHHHHHHHHHHhhccccCCCCCHHHHhhhccCCCC
Q 008736 323 ARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDF 364 (555)
Q Consensus 323 i~~~~~~~~~R~~~l~~~Ll~~VRf~lls~~~L~~~~~~~~l 364 (555)
+..+ + ..+.+.=-|..|+.+.|..+++++.+
T Consensus 159 i~~~----------f-~~v~~~~~f~~L~~~~l~~lL~~d~L 189 (256)
T 3hve_A 159 LETH----------F-RDVSSTEEFLELSPQKLKEVISLEKL 189 (256)
T ss_dssp HHHH----------H-HHHTTCHHHHSSCHHHHHHHHHCC--
T ss_pred HHHH----------H-HHHhCCcchhcCCHHHHHHHHccCCC
Confidence 7654 2 34555556778899999988887766
No 64
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=37.65 E-value=26 Score=28.99 Aligned_cols=33 Identities=12% Similarity=0.074 Sum_probs=29.6
Q ss_pred CCChhhHHHHHhccchhhhhhchHHHHHHHHHHHHHh
Q 008736 243 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAAR 279 (555)
Q Consensus 243 ~l~~~n~~~~l~~a~~~~~a~~~~~L~~~~~~fi~~n 279 (555)
.++.+|+..++..|+.+ .++.|++.|.+|+.+.
T Consensus 88 ~~~~~~~~~ll~~A~~~----~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 88 QAKAEDLDDLLYAAEIL----EIEYLEEQCLKMLETI 120 (121)
T ss_dssp CCCGGGHHHHHHHHHHH----TCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH----CCHHHHHHHHHHHHHh
Confidence 57889999999999999 8999999999998753
No 65
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=36.84 E-value=12 Score=31.02 Aligned_cols=33 Identities=12% Similarity=0.088 Sum_probs=27.9
Q ss_pred CCChhhHHHHHhccchhhhhhchHHHHHHHHHHHHHh
Q 008736 243 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAAR 279 (555)
Q Consensus 243 ~l~~~n~~~~l~~a~~~~~a~~~~~L~~~~~~fi~~n 279 (555)
.++.+|+..++..|+.+ .++.|++.|.+|+.++
T Consensus 85 ~~~~~~v~~ll~~A~~~----~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 85 ALTSGNRDQVLLAAREL----RVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHCC---
T ss_pred ccCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHHc
Confidence 57889999999999999 8999999999998765
No 66
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=36.27 E-value=22 Score=29.38 Aligned_cols=31 Identities=10% Similarity=0.126 Sum_probs=28.2
Q ss_pred CCChhhHHHHHhccchhhhhhchHHHHHHHHHHHH
Q 008736 243 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLA 277 (555)
Q Consensus 243 ~l~~~n~~~~l~~a~~~~~a~~~~~L~~~~~~fi~ 277 (555)
.++.+|+..++..|+.+ .++.|++.|.+|+.
T Consensus 87 ~i~~~~~~~ll~~A~~l----~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 87 SLSPENVDDVLAVATFL----QMQDIITACHALKS 117 (119)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHHh
Confidence 57889999999999999 89999999999874
No 67
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=35.90 E-value=18 Score=29.63 Aligned_cols=31 Identities=6% Similarity=-0.008 Sum_probs=28.3
Q ss_pred CCChhhHHHHHhccchhhhhhchHHHHHHHHHHHH
Q 008736 243 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLA 277 (555)
Q Consensus 243 ~l~~~n~~~~l~~a~~~~~a~~~~~L~~~~~~fi~ 277 (555)
.++.+|+..++..|..+ .++.|++.|.+|+.
T Consensus 85 ~~~~~~v~~ll~~A~~~----~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 85 NLDSWNVKEIHQAADYL----KVEEVVTKCKIKME 115 (116)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHHh
Confidence 57889999999999999 89999999999984
No 68
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=33.02 E-value=8.9 Score=32.82 Aligned_cols=34 Identities=12% Similarity=0.164 Sum_probs=30.6
Q ss_pred CCChhhHHHHHhccchhhhhhchHHHHHHHHHHHHHhH
Q 008736 243 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARY 280 (555)
Q Consensus 243 ~l~~~n~~~~l~~a~~~~~a~~~~~L~~~~~~fi~~nf 280 (555)
.++.+|+..++..|..+ .++.|++.|.+||..++
T Consensus 100 ~i~~~~v~~ll~~A~~~----~i~~L~~~C~~~l~~~l 133 (138)
T 2z8h_A 100 ILSKDNVDEVCRCVEFL----SVHNIEESCFQFLKFKF 133 (138)
T ss_dssp CCCTTTHHHHHHHHHHH----TCGGGHHHHHHHTTCCC
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHhc
Confidence 57889999999999999 89999999999998764
No 69
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=31.43 E-value=32 Score=28.20 Aligned_cols=30 Identities=7% Similarity=0.131 Sum_probs=27.4
Q ss_pred CCChhhHHHHHhccchhhhhhchHHHHHHHHHHH
Q 008736 243 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFL 276 (555)
Q Consensus 243 ~l~~~n~~~~l~~a~~~~~a~~~~~L~~~~~~fi 276 (555)
.++.+|+..++..|..+ .++.|++.|.+|+
T Consensus 90 ~~~~~~~~~ll~~A~~~----~i~~L~~~C~~~L 119 (120)
T 2if5_A 90 TVSTANVGDILSAARLL----EIPAVSHVCADLL 119 (120)
T ss_dssp CCCGGGHHHHHHHHHHT----TCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHh
Confidence 57789999999999999 8999999999886
No 70
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=21.77 E-value=29 Score=29.84 Aligned_cols=30 Identities=10% Similarity=0.127 Sum_probs=27.1
Q ss_pred CCChhhHHHHHhccchhhhhhchHHHHHHHHHHH
Q 008736 243 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFL 276 (555)
Q Consensus 243 ~l~~~n~~~~l~~a~~~~~a~~~~~L~~~~~~fi 276 (555)
.++.+|+..++.+|..+ .++.|++.|.+||
T Consensus 114 ~i~~~~v~~ll~~A~~l----~i~~L~~~C~~~L 143 (144)
T 2ppi_A 114 RLNEDTIQDVVQAADLL----LLTDLKTLCCEFL 143 (144)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHh----CcHHHHHHHHHHh
Confidence 57789999999999999 8999999998876
Done!